BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044352
(544 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224057531|ref|XP_002299253.1| predicted protein [Populus trichocarpa]
gi|222846511|gb|EEE84058.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/538 (63%), Positives = 418/538 (77%), Gaps = 4/538 (0%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSA 66
+N+S++ + LL +C+K K LR GKQVHA L T DL I SL SKLVG+YA CGDV SA
Sbjct: 20 SNISLDPIAGLLKQCLKFKTLRGGKQVHAWLVTRGTDLRILSLNSKLVGMYASCGDVKSA 79
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
LVF +I NPNVF LNWMV+ASAF G ++EAIGYF M++ ++ NK+TFSIVLKA VGL
Sbjct: 80 TLVFKRIRNPNVFALNWMVLASAFEGYYKEAIGYFCSMKDSVFIYNKYTFSIVLKAFVGL 139
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
LD+ KGK+VH++ Q+GFE+DV V NAL+DMYSKCG + AR VF M +RD+VSWTSMI
Sbjct: 140 LDLNKGKEVHSMVKQLGFESDVCVANALVDMYSKCGCIGYARTVFDRMAKRDIVSWTSMI 199
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
SGYCNV K++EA+VLFERMKLEGLEPN FT+NA+I+ YARRGDS+ AF+ S+MT EG V
Sbjct: 200 SGYCNVGKIEEALVLFERMKLEGLEPNDFTWNALISGYARRGDSDGAFSLLSKMTREGLV 259
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
PDLVTWNAMI+GF Q +R +A KLF+ MLV G+KPN VTV G+L A G+ SIQ GR I
Sbjct: 260 PDLVTWNAMIAGFVQGERAGDAFKLFQDMLVLGVKPNLVTVAGLLPACGMVSSIQRGRAI 319
Query: 307 HALVCRMGLHI-DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
H LV R+ I + F SALIDMYS+CGS K+ART+FE KNVASWNAMIGCYGKHGM
Sbjct: 320 HGLVYRLEFDISNAFIASALIDMYSECGSFKEARTVFEKIHNKNVASWNAMIGCYGKHGM 379
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
V++SI+LFERM EG++AN+VTL+ VLSACSH G VEKGLEIF SMKERY V KEHYA
Sbjct: 380 VNTSIQLFERMHGEGIQANDVTLLCVLSACSHSGYVEKGLEIFWSMKERYMVDRKKEHYA 439
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
CVVDML RSGR+V+AY+L++++P+ VT S+AGAF NGC IHGRRDLA M ++ L+
Sbjct: 440 CVVDMLSRSGRLVDAYELVKEMPIEVTKSIAGAFFNGCMIHGRRDLAEKMIDDVTRGDLK 499
Query: 486 KPDGFVMLSNICAADGEWHEAEN-LRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
KP F MLS I A GE E N ++KI+KE+ QK+P S+VE+++EFV E++ E+
Sbjct: 500 KPGSFAMLSAIYATSGERKEVRNTMKKIVKERKAQKEPACSQVEEKDEFVGVEIEKEN 557
>gi|147862347|emb|CAN84022.1| hypothetical protein VITISV_004991 [Vitis vinifera]
Length = 566
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/535 (61%), Positives = 390/535 (72%), Gaps = 29/535 (5%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARL 68
SV D KC+K KAL+ GKQVHA+L + D+NI S+ SKLVG+YA CGD+ SARL
Sbjct: 22 FSVELNDPTXKKCLKCKALQPGKQVHAMLLASRIDMNILSMSSKLVGMYASCGDLQSARL 81
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
V ++ NPNVF NWMV A AF G +EAIGYFSLM+E NKFTFSIVLK CVGL+D
Sbjct: 82 VLERTQNPNVFAFNWMVSALAFHGYHEEAIGYFSLMQELGIVANKFTFSIVLKQCVGLMD 141
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
KGK+VH V ++ G N VSV N+ IDMY KCG + R+VF GM ERDVVSWTSMI G
Sbjct: 142 FNKGKEVHCVISRTGLGNVVSVANSXIDMYCKCGHVGYGRKVFDGMIERDVVSWTSMICG 201
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
YCN+ ++EA+VLFERMK+EGLEPN FT+N +IA YAR GD N AF FSRM EG VPD
Sbjct: 202 YCNIGTLEEALVLFERMKVEGLEPNDFTWNXMIAGYARDGDCNGAFVLFSRMVREGLVPD 261
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
LVTWNAMISGF QS + EA +LF+ M V+GIKPN VTVTG+L A GL GSI G+E+H
Sbjct: 262 LVTWNAMISGFTQSLKAVEAWRLFQDMXVAGIKPNQVTVTGLLPACGLMGSIHRGKELHG 321
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
L+ RMG ++VF +ALID YSKCG++KDA +F+ IKNVASWNAMIGCYGKHG+VDS
Sbjct: 322 LIYRMGXDMNVFVATALIDXYSKCGTVKDAWDVFDRIPIKNVASWNAMIGCYGKHGLVDS 381
Query: 369 SIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
SI+LFERM EGM+AN +TLISVLSACSHGGLVEKGL IF
Sbjct: 382 SIQLFERMQAEGMQANHITLISVLSACSHGGLVEKGLTIF-------------------- 421
Query: 429 DMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
RMVEAY+L +++P+ VT+S+ GAF NGC IHGRRDLA M E+ M L++P
Sbjct: 422 -------RMVEAYELFKEMPIEVTDSIVGAFFNGCKIHGRRDLAKXMAEDILRMELKRPG 474
Query: 489 GFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNESK 543
GFV LSNI AADGEW E EN+RK+MKE+ V K+PGFS VEKR+ FVE E +NE K
Sbjct: 475 GFVTLSNIYAADGEWEEVENIRKVMKEQGVHKKPGFSWVEKRDGFVESETRNEYK 529
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 193/507 (38%), Positives = 305/507 (60%), Gaps = 5/507 (0%)
Query: 25 KSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+ +AL +G+ +HA L L + +KL+ Y CG +++AR +FDKIPN N+ W
Sbjct: 39 RDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNI--RRW 96
Query: 84 MVM--ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
+V+ A A G ++EA+ FS M++ R N+F +LKAC L D + G+ +H V +
Sbjct: 97 IVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILK 156
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
FE+D + +ALI MYSKCG + A RVF + ++D+V +M+SGY V EA+ L
Sbjct: 157 NSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNL 216
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
++M+ G++PN ++N +IA +++ GD + F MTA G PD+V+W ++ISGF Q
Sbjct: 217 VQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQ 276
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
+ +E FK ML G P++VT++ +L A +++ G+EIH +G+ DV+
Sbjct: 277 NFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYV 336
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
SAL+DMY+KCG + +A+ LF + +N +WN++I Y HG + +IELF +M E
Sbjct: 337 RSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDT 396
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
+ + +T +VL+ACSH G+VE G +FR M+E+Y ++ EHYAC+VD+L R+G++ EAY
Sbjct: 397 KLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAY 456
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
DL++ +P+ + GA C HG +LA E FE+ P ++LSN+ A G
Sbjct: 457 DLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAG 516
Query: 502 EWHEAENLRKIMKEKNVQKQPGFSRVE 528
W A ++K+MK++ K PG S +E
Sbjct: 517 RWGNAAKMKKMMKQRKFGKFPGCSWIE 543
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 6/202 (2%)
Query: 16 LDCLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
+ LL C LR GK++H A++ + +++ ++S LV +YA CG ++ A+++F +
Sbjct: 302 ISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVY-VRSALVDMYAKCGYISEAKILFYMM 360
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P N N ++ A G EAI F+ M E + + TF+ VL AC ++ G+
Sbjct: 361 PERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGE 420
Query: 134 QV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
+ + + E + ++D+ + G L A + M E D W +++ N
Sbjct: 421 SLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRN 480
Query: 192 VSKVDEAVVLFERM-KLEGLEP 212
++ A V E + +LE P
Sbjct: 481 HGNIELAEVAAEHLFELEPESP 502
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 304/507 (59%), Gaps = 5/507 (0%)
Query: 25 KSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+ +AL +G+ +HA L L + +KL+ Y CG +++AR +FDKIPN N+ W
Sbjct: 815 RDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNI--RRW 872
Query: 84 MVM--ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
+V+ A A G ++EA+ FS M++ R N+F +LKAC L D + G+ +H V +
Sbjct: 873 IVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILK 932
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
FE+D + +ALI MYSKCG + A RVF + ++D+V +M+SGY V EA+ L
Sbjct: 933 NSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBL 992
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
++M+ G++PN ++N +IA +++ GD + F MTA G PD+V+W ++ISGF Q
Sbjct: 993 VQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQ 1052
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
+ +E FK ML G P++VT++ +L A +++ G+EIH +G+ DV+
Sbjct: 1053 NFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYV 1112
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
SAL+DMY+KCG + +A+ LF + +N +WN++I Y HG + +IELF +M E
Sbjct: 1113 RSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDT 1172
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
+ + +T +VL+ACSH G+VE G +F M+E+Y ++ EHYAC+VD+L R+G++ EAY
Sbjct: 1173 KLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAY 1232
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
DL++ +P+ + GA C HG +LA E FE+ P ++LSN+ A G
Sbjct: 1233 DLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAG 1292
Query: 502 EWHEAENLRKIMKEKNVQKQPGFSRVE 528
W A ++K+MK++ K PG S +E
Sbjct: 1293 RWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 156/517 (30%), Positives = 282/517 (54%), Gaps = 38/517 (7%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ L+ +YA CG+V+SA V+DK+ + + N ++ A A G F +A F + R
Sbjct: 152 TSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTR 211
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N +T+S +L C + I++GKQ+HA +M + ++ +VGNAL+ +YSKCG++ A V
Sbjct: 212 PNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIV 271
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------- 223
F + +R+++SWT+ I+G+ +A+ F M+ G+EPN+FT++ ++AS
Sbjct: 272 FESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDF 331
Query: 224 ----------------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
Y+ G+ + A F +M G V+WNA+
Sbjct: 332 IDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQM---GRAASNVSWNAL 388
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
I+G+ +++ +A++ F M+ + N T + + +A S+ +IH+ + + +
Sbjct: 389 IAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNV 448
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
++ S+LI+ Y++CGSL++A +F +V SWN++I Y ++G +I L +
Sbjct: 449 ESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRK 508
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M+EEG + T ++VLSACSH GLV++G E F+SM + Y ++ + H +C+VD+L R+G
Sbjct: 509 MIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAG 568
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
++ A D ++++ M T S+ C + +A + E+ ++ +V LSN
Sbjct: 569 QLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSN 628
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ A G W +AEN R++M++K + K+PG S +E N+
Sbjct: 629 MYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNK 665
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%)
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ V L G G +++GR H V ++GL D F ++LIDMY+KCG + A +
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
++ + A+ N +I Y ++G + ++F ++ G R N T ++L+ C +
Sbjct: 171 YDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAI 230
Query: 402 EKGLEI 407
++G ++
Sbjct: 231 QEGKQL 236
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 6/202 (2%)
Query: 16 LDCLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
+ LL C LR GK++H A++ + +++ ++S LV +YA CG ++ A+++F +
Sbjct: 1078 ISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVY-VRSALVDMYAKCGYISEAKILFYMM 1136
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P N N ++ A G EAI F+ M E + + TF+ VL AC ++ G+
Sbjct: 1137 PERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGE 1196
Query: 134 QVHA-VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
+ + + E + ++D+ + G L A + M E D W +++ N
Sbjct: 1197 SLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRN 1256
Query: 192 VSKVDEAVVLFERM-KLEGLEP 212
++ A V E + +LE P
Sbjct: 1257 HGNIELAEVAAEHLFELEPESP 1278
>gi|255559020|ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540375|gb|EEF41946.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 547
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 187/521 (35%), Positives = 295/521 (56%), Gaps = 7/521 (1%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL---NIFSLKSKLVGVYAGCGDVNSARL 68
S++ D L+ + AL QGK +HA L + L N F+ SKL+ Y ++ R
Sbjct: 28 SLHTFDELIKTYTRDHALNQGKHLHARLIVSGLASSNNFA--SKLISFYTETRQLSIVRK 85
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
+FD+IP PN + ++ A + G +Q+ + FS M+ R NKF VL+AC + D
Sbjct: 86 LFDRIPKPNFYQRTVLIGAYSRHGFYQDVLDVFSEMQNERLRPNKFVIPSVLRACGHVFD 145
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
++ GK +H+V + FE+DV V ALIDMYS+C + AR+VF GM E+D+V+ +M+ G
Sbjct: 146 LQTGKILHSVILRHLFESDVVVNTALIDMYSRCRHVEKARKVFDGMQEKDLVALNAMVLG 205
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
Y E +L E+M++ ++PN T+N +I+ +A+ GD F M+ GF PD
Sbjct: 206 YAQNGFAKEGFLLVEQMQMLDIKPNLVTWNTLISGFAQAGDKVMVQELFGLMSMHGFEPD 265
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
+++W ++IS F Q+ A FK ML G PN+ T++ +L A +++ GRE+H
Sbjct: 266 VISWTSVISRFVQNSHNEAAFAAFKQMLQHGAYPNSATISSLLPACASLANVRHGRELHG 325
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
+G+ D++ SA++DMYSKCG + +AR LF ++ +WN+MI Y HG D
Sbjct: 326 YAFAIGVEEDIYVRSAIVDMYSKCGLISEARMLFSKMPERHTVTWNSMIFGYANHGYCDE 385
Query: 369 SIELFERMLE-EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+IELF +M + E + + ++ +VL+ACSHG LVE G +F M E+Y + EHYAC+
Sbjct: 386 AIELFNQMEKTEAKKIDHLSFTAVLTACSHGRLVELGQSLFLLMHEKYKIVPRLEHYACM 445
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
+D+L R+G++ EAYD+++ +P+ + GA C HG DLA E+ R
Sbjct: 446 IDLLGRAGKLSEAYDMIKTMPVEPDLFVWGALLGACRQHGEIDLAEIAARHLAELEPRNA 505
Query: 488 DGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
++LSN+ A G W L K+ K K ++K +S ++
Sbjct: 506 GNNMLLSNLYADAGSWENVAKL-KMGKRKRLRKFSAYSWIQ 545
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 189/504 (37%), Positives = 298/504 (59%), Gaps = 15/504 (2%)
Query: 32 GKQVHALLCT-NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
K +HALL + + ++LV +YA GDV+ +R FD+IP +V+ N M+ A
Sbjct: 35 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94
Query: 91 TGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
G+F EAIG ++ L+ R + +TF VLKAC L+D G+++H A ++GF+ +V
Sbjct: 95 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVF 151
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
V +LI MYS+ G AR +F M RD+ SW +MISG +A+ + + M+LEG
Sbjct: 152 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 211
Query: 210 LEPNQFTYNAIIAS----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
++ N T +I+ YA+ G ++A F + V D+++WN +I+G+AQ+
Sbjct: 212 IKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIP----VKDVISWNTLITGYAQNGLA 267
Query: 266 NEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+EA++++K M I PN T +L A G++Q G +IH V + LH+DVF +
Sbjct: 268 SEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATC 327
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
LID+Y KCG L DA +LF ++ +WNA+I C+G HG + +++LF ML+EG++ +
Sbjct: 328 LIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPD 387
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
VT +S+LSACSH G VE+G FR M+E YG+K S +HY C+VD+L R+G + AYD +
Sbjct: 388 HVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFI 446
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+ +P+ S+ GA C IHG +L + FE+ + +V+LSNI A G+W
Sbjct: 447 KDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWE 506
Query: 505 EAENLRKIMKEKNVQKQPGFSRVE 528
+ +R + +E+ ++K PG+S +E
Sbjct: 507 GVDKVRSLARERGLKKTPGWSTIE 530
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 188/557 (33%), Positives = 298/557 (53%), Gaps = 45/557 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C L+ G++VH + + + + L +Y CG + +AR VFD++P +
Sbjct: 126 VIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRD 185
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V N ++ + G EA+ FS M+ + N T V+ C LL +++GKQ+H
Sbjct: 186 VVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHC 245
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
A + G E+DV V N L++MY+KCG + +A ++F M RDV SW ++I GY S+ E
Sbjct: 246 YAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHE 305
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
A+ F RM++ G++PN T NA++
Sbjct: 306 ALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVN 365
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA+ G+ N+A+ F RM + ++V WNA+ISG++Q +EAL LF M GIKP
Sbjct: 366 MYAKCGNVNSAYKLFERMPKK----NVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKP 421
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
++ + VL A +++ G++IH R G +V G+ L+D+Y+KCG++ A+ LF
Sbjct: 422 DSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLF 481
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E ++V SW MI YG HG + ++ LF +M E G + + + ++L+ACSH GLV+
Sbjct: 482 ERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVD 541
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+GL+ F+ MK YG+ EHYAC+VD+L R+G + EA +++ + + ++ GA
Sbjct: 542 QGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGA 601
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IH +L + FE+ +V+LSNI A W + LRK+MKEK V+KQP
Sbjct: 602 CRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQP 661
Query: 523 GFSRVEKRNEFVEKEVQ 539
G S V V ++VQ
Sbjct: 662 GCSVVA-----VHRDVQ 673
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 218/424 (51%), Gaps = 48/424 (11%)
Query: 100 YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYS 159
Y+ + R I +K F V+KAC D++ G++VH GFE+DV VG AL MY+
Sbjct: 108 YYQMQRTGI-NPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYT 166
Query: 160 KCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-- 217
KCG L +AR+VF M +RDVVSW ++I+GY + EA+ LF M++ G++PN T
Sbjct: 167 KCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVS 226
Query: 218 ---------------------------------NAIIASYARRGDSNAAFAFFSRMTAEG 244
N ++ YA+ G+ N A F RM
Sbjct: 227 VMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMP--- 283
Query: 245 FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
+ D+ +WNA+I G++ + + +EAL F M V GIKPN++T+ VL A +++ G+
Sbjct: 284 -IRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQ 342
Query: 305 EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHG 364
+IH R G + G+AL++MY+KCG++ A LFE KNV +WNA+I Y +HG
Sbjct: 343 QIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHG 402
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY 424
++ LF M +G++ + ++SVL AC+H +E+G +I R G + +
Sbjct: 403 HPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQI-HGYTIRSGFESNVVVG 461
Query: 425 ACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFE 481
+VD+ + G + A L ++P + +M A+ IHG + A+ + + E
Sbjct: 462 TGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAY----GIHGHGEDALALFSKMQE 517
Query: 482 MGLR 485
G +
Sbjct: 518 TGTK 521
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 191/380 (50%), Gaps = 18/380 (4%)
Query: 129 IKKGKQVHAVATQMGF-----ENDVSVGNALIDMYSKCGLLCSARRVFHGM----FERDV 179
+K ++V A A Q F N+ V I Y K G A R+++ M D
Sbjct: 61 VKTTREVSACANQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDK 120
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
+ + S+I + S + + E + G E + A+ + Y + G A F R
Sbjct: 121 LVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDR 180
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
M D+V+WNA+I+G++Q+ + EAL LF M V+GIKPN+ T+ V+ +
Sbjct: 181 MPKR----DVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLA 236
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
++ G++IH R G+ DV + L++MY+KCG++ A LFE I++VASWNA+IG
Sbjct: 237 LEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGG 296
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
Y + ++ F RM G++ N +T++SVL AC+H +E+G +I R G +
Sbjct: 297 YSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQI-HGYAIRSGFES 355
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA-GAFRNGCNIHGRRDLAVTMGEE 478
+ +V+M + G + AY L ++P N +A A +G + HG A+ + E
Sbjct: 356 NDVVGNALVNMYAKCGNVNSAYKLFERMPK--KNVVAWNAIISGYSQHGHPHEALALFIE 413
Query: 479 FFEMGLRKPDGFVMLSNICA 498
G+ KPD F ++S + A
Sbjct: 414 MQAQGI-KPDSFAIVSVLPA 432
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/537 (36%), Positives = 291/537 (54%), Gaps = 40/537 (7%)
Query: 28 ALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
AL+ GK VH+ +L + ++ + LV +YA CG R VF+K+ N ++ N M+
Sbjct: 242 ALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIG 301
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
A G ++EA ++ M+ NK T+ I+L ACV + GK++H+ + GF +
Sbjct: 302 GLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTS 361
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D+ V NALI MYS+CG + AR VF M +DV+SWT+MI G EA+ +++ M+
Sbjct: 362 DIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQ 421
Query: 207 LEGLEPNQFTYNAIIAS--------YARR---------------------------GDSN 231
G+EPN+ TY +I+ + + RR G
Sbjct: 422 QAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVK 481
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A F RM D+V +NAMI G+A EALKLF + G+KP+ VT +L
Sbjct: 482 DARQVFDRMIQR----DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINML 537
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A +GS++ REIH LV + G D G+AL+ Y+KCGS DA +FE +NV
Sbjct: 538 NACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVI 597
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SWNA+IG +HG +++LFERM EG++ + VT +S+LSACSH GL+E+G F SM
Sbjct: 598 SWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSM 657
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
+ + + + EHY C+VD+L R+G++ EA L++ +P + GA C IHG +
Sbjct: 658 SQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPV 717
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
A E ++ L +V LS++ AA G W A LRK+M+++ V K+PG S ++
Sbjct: 718 AERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQ 774
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 159/525 (30%), Positives = 258/525 (49%), Gaps = 53/525 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK--LVGVYAGCGDVNSARLVFDKIPNP 76
L C AL G+++H L +F +K ++ +YA CG + AR VFDK+
Sbjct: 132 FLSSCKSPGALEWGREIHFQAMQAGL-LFDVKVANCILNMYAKCGSIEEAREVFDKMEKK 190
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V + A G + A F M + N+ T+ VL A +K GK VH
Sbjct: 191 SVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVH 250
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ G E+D +VG AL+ MY+KCG R+VF + RD+++W +MI G +
Sbjct: 251 SRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWE 310
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
EA ++ +M+ EG+ PN+ TY NA+I
Sbjct: 311 EASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALI 370
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ Y+R G A F +M + D+++W AMI G A+S EAL +++ M +G++
Sbjct: 371 SMYSRCGSIKDARLVFDKMVRK----DVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN VT T +L A +++ GR IH V GL D G+ L++MYS CGS+KDAR +
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQV 486
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ +++ ++NAMIG Y H + +++LF+R+ EEG++ ++VT I++L+AC++ G +
Sbjct: 487 FDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 546
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGA 458
E EI ++ + G +V + G +A ++ + + + N++ G
Sbjct: 547 EWAREI-HTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIG- 604
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADG 501
G HGR A+ + E G+ KPD FV L + C+ G
Sbjct: 605 ---GSAQHGRGQDALQLFERMKMEGV-KPDIVTFVSLLSACSHAG 645
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 151/544 (27%), Positives = 263/544 (48%), Gaps = 48/544 (8%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLV 69
S +Y+ +L +C++ K L G+QVH + + + +++ + L+ +Y CG + AR V
Sbjct: 23 SSDYMK-MLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNA-LINMYIQCGSIEEARQV 80
Query: 70 FDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
+ K+ + +W M + G ++A+ M++ ++ T L +C
Sbjct: 81 WKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPG 140
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
++ G+++H A Q G DV V N +++MY+KCG + AR VF M ++ VVSWT I
Sbjct: 141 ALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIG 200
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
GY + + + A +F++M+ EG+ PN+ TY +++ +++ A SR+ G
Sbjct: 201 GYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHES 260
Query: 248 -------------------------------DLVTWNAMISGFAQSKRENEALKLFKGML 276
DL+ WN MI G A+ EA +++ M
Sbjct: 261 DTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQ 320
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
G+ PN +T +L A + ++ G+EIH+ V + G D+ +ALI MYS+CGS+K
Sbjct: 321 REGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIK 380
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
DAR +F+ K+V SW AMIG K G ++ +++ M + G+ N VT S+L+ACS
Sbjct: 381 DARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACS 440
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTN 453
+E G I + + E G+ +V+M G + +A +D + Q + N
Sbjct: 441 SPAALEWGRRIHQQVVEA-GLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYN 499
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRK 511
+M G + H A+ + + E GL KPD ++ + N CA G A +
Sbjct: 500 AMIGGY----AAHNLGKEALKLFDRLQEEGL-KPDKVTYINMLNACANSGSLEWAREIHT 554
Query: 512 IMKE 515
++++
Sbjct: 555 LVRK 558
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 219/443 (49%), Gaps = 61/443 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLC----TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
LL C+ S AL GK++H+ + T+D+ + ++ L+ +Y+ CG + ARLVFDK+
Sbjct: 334 LLNACVNSAALHWGKEIHSRVAKAGFTSDIGV---QNALISMYSRCGSIKDARLVFDKMV 390
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+V M+ A +G EA+ + M++ N+ T++ +L AC ++ G++
Sbjct: 391 RKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRR 450
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + G D VGN L++MYS CG + AR+VF M +RD+V++ +MI GY +
Sbjct: 451 IHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNL 510
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
EA+ LF+R++ EGL+P++ TY NA
Sbjct: 511 GKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNA 570
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++++YA+ G + A F +MT ++++WNA+I G AQ R +AL+LF+ M + G
Sbjct: 571 LVSTYAKCGSFSDASIVFEKMTKR----NVISWNAIIGGSAQHGRGQDALQLFERMKMEG 626
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG----SALIDMYSKCGSL 335
+KP+ VT +L A G ++ GR C M + ++D+ + G L
Sbjct: 627 VKPDIVTFVSLLSACSHAGLLEEGRR---YFCSMSQDFAIIPTIEHYGCMVDLLGRAGQL 683
Query: 336 KDARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR---ANEVTLISV 391
+A L + + N W A++G HG ++ + ER E ++ N V +++
Sbjct: 684 DEAEALIKTMPFQANTRIWGALLGACRIHG----NVPVAERAAESSLKLDLDNAVVYVAL 739
Query: 392 LSACSHGGLVEKGLEIFRSMKER 414
+ G+ + ++ + M++R
Sbjct: 740 SHMYAAAGMWDSAAKLRKLMEQR 762
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 208/440 (47%), Gaps = 58/440 (13%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
+ N + +LK C+ + D+ G+QVH Q D NALI+MY +CG + AR+
Sbjct: 20 QVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQ 79
Query: 170 VFHGM--FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------- 217
V+ + ER V SW +M+ GY +++A+ L +M+ GL P++ T
Sbjct: 80 VWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSP 139
Query: 218 -------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
N I+ YA+ G A F +M + +V+W
Sbjct: 140 GALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKK----SVVSW 195
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
I G+A R A ++F+ M G+ PN +T VL A +++ G+ +H+ +
Sbjct: 196 TITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILN 255
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
G D G+AL+ MY+KCGS KD R +FE +++ +WN MIG + G + + E+
Sbjct: 256 AGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEV 315
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDML 431
+ +M EG+ N++T + +L+AC + + G EI R K + I ++ ++ M
Sbjct: 316 YNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQN--ALISMY 373
Query: 432 CRSGRMVEA---YD-LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
R G + +A +D ++R+ + T + G ++G A+T+ +E + G+ +P
Sbjct: 374 SRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAE-----ALTVYQEMQQAGV-EP 427
Query: 488 D--GFVMLSNICAADG--EW 503
+ + + N C++ EW
Sbjct: 428 NRVTYTSILNACSSPAALEW 447
>gi|356541211|ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Glycine max]
Length = 548
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 183/508 (36%), Positives = 290/508 (57%), Gaps = 4/508 (0%)
Query: 25 KSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+ +AL GK++HA L TN F++ S LV Y CG ++ AR +FDKIP NV
Sbjct: 39 RDRALHAGKKLHAHLVTNGFARFNVVASNLVSFYTCCGQLSHARKLFDKIPTTNVRRWIA 98
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI--VLKACVGLLDIKKGKQVHAVATQ 141
++ + A G + A+ FS M+ + F I VLKAC + D G+++H +
Sbjct: 99 LIGSCARCGFYDHALAVFSEMQAVQGLTPNYVFVIPSVLKACGHVGDRITGEKIHGFILK 158
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
FE D V ++LI MYSKC + AR+VF GM +D V+ ++++GY +EA+ L
Sbjct: 159 CSFELDSFVSSSLIVMYSKCAKVEDARKVFDGMTVKDTVALNAVVAGYVQQGAANEALGL 218
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
E MKL GL+PN T+N++I+ ++++GD F M A+G PD+V+W ++ISGF Q
Sbjct: 219 VESMKLMGLKPNVVTWNSLISGFSQKGDQGRVSEIFRLMIADGVEPDVVSWTSVISGFVQ 278
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
+ R EA FK ML G P + T++ +L A + +GREIH G+ D++
Sbjct: 279 NFRNKEAFDTFKQMLSHGFHPTSATISALLPACATAARVSVGREIHGYALVTGVEGDIYV 338
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
SAL+DMY+KCG + +AR LF KN +WN++I + HG + +IELF +M +EG+
Sbjct: 339 RSALVDMYAKCGFISEARNLFSRMPEKNTVTWNSIIFGFANHGYCEEAIELFNQMEKEGV 398
Query: 382 -RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ + +T + L+ACSH G E G +F+ M+E+Y ++ EHYAC+VD+L R+G++ EA
Sbjct: 399 AKLDHLTFTAALTACSHVGDFELGQRLFKIMQEKYSIEPRLEHYACMVDLLGRAGKLHEA 458
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
Y +++ +P+ + GA C H +LA E+ ++LS++ A
Sbjct: 459 YCMIKTMPIEPDLFVWGALLAACRNHRHVELAEVAAMHLMELEPESAANPLLLSSVYADA 518
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRVE 528
G+W + E ++K +K+ ++K G S +E
Sbjct: 519 GKWGKFERVKKRIKKGKLRKLQGLSWIE 546
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 151/349 (43%), Gaps = 48/349 (13%)
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF------VPDLVT------------- 251
EP +Y +I YAR +A + + GF +LV+
Sbjct: 26 EPE--SYAELIDMYARDRALHAGKKLHAHLVTNGFARFNVVASNLVSFYTCCGQLSHARK 83
Query: 252 ------------WNAMISGFAQSKRENEALKLFKGM-LVSGIKPNNV-TVTGVLQAGGLT 297
W A+I A+ + AL +F M V G+ PN V + VL+A G
Sbjct: 84 LFDKIPTTNVRRWIALIGSCARCGFYDHALAVFSEMQAVQGLTPNYVFVIPSVLKACGHV 143
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
G G +IH + + +D F S+LI MYSKC ++DAR +F+ +K+ + NA++
Sbjct: 144 GDRITGEKIHGFILKCSFELDSFVSSSLIVMYSKCAKVEDARKVFDGMTVKDTVALNAVV 203
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
Y + G + ++ L E M G++ N VT S++S S G + EIFR M GV
Sbjct: 204 AGYVQQGAANEALGLVESMKLMGLKPNVVTWNSLISGFSQKGDQGRVSEIFRLMIAD-GV 262
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQV---PMYVTNSMAGAFRNGCNIHGRRDLAVT 474
+ + V+ ++ R EA+D +Q+ + T++ A C R V+
Sbjct: 263 EPDVVSWTSVISGFVQNFRNKEAFDTFKQMLSHGFHPTSATISALLPACATAAR----VS 318
Query: 475 MGEEFFEMGL---RKPDGFV--MLSNICAADGEWHEAENLRKIMKEKNV 518
+G E L + D +V L ++ A G EA NL M EKN
Sbjct: 319 VGREIHGYALVTGVEGDIYVRSALVDMYAKCGFISEARNLFSRMPEKNT 367
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 180/514 (35%), Positives = 290/514 (56%), Gaps = 8/514 (1%)
Query: 19 LLGKCMKS-KALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+LG+ + + L+ + VH+ + + DL SL KL+ YA DV +AR VFD+IP
Sbjct: 45 MLGQVLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPER 104
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV ++N M+ + G ++E I F M + + +TF VLKAC +I GK++H
Sbjct: 105 NVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIH 164
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
AT++G + + VGN L+ MY KCG L AR V M RDVVSW S+++GY + D
Sbjct: 165 GSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFD 224
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA--FFSRMTAEGFVPDLVTWNA 254
+A+ + M+ + + T +++ + + N + F +M + LV+WN
Sbjct: 225 DALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKS----LVSWNV 280
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MI + ++ EA++L+ GM G +P+ V++T VL A G T ++ +G++IH + R
Sbjct: 281 MIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 340
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L ++ +ALIDMY+KCG L AR +FE + ++V SW AMI YG G ++ LF
Sbjct: 341 LIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 400
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
+M + G+ + + ++ L+ACSH GL+E+G F+ M + Y + EH AC+VD+L R+
Sbjct: 401 KMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 460
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
G++ EAY ++++PM + GA C +H D+ + ++ F++ + +V+LS
Sbjct: 461 GKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLS 520
Query: 495 NICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
NI A G W E N+R IMK K ++K PG S VE
Sbjct: 521 NIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVE 554
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 188/547 (34%), Positives = 308/547 (56%), Gaps = 39/547 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLC--TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C + K + G+++H ++ T N F L ++++ +Y+ CG + +R+VFDK+
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 77 NVFMLNWMVMASAFTGN--FQEAIGYFS-LMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
N+F W + SA+T N F++A+ FS L+ ++ + FT V+KAC GLLD+ G+
Sbjct: 171 NLF--QWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 228
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA-RRVFHGMFERDVVSWTSMISGYCNV 192
+H +AT+M +DV VGNALI MY KCGL+ A +RVF M + V SW +++ GY
Sbjct: 229 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQN 288
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR-----RGDSNAAFAFFSRMTAEGFV- 246
S +A+ L+ +M GL+P+ FT +++ + +R G+ FA + + + F+
Sbjct: 289 SDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIG 348
Query: 247 ------------P-------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
P LV+WN MI+G++Q+ +EA+ LF+ ML GI+
Sbjct: 349 ISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQ 408
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P + + V A ++++G+E+H + L D+F S++IDMY+K G + ++ +
Sbjct: 409 PYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRI 468
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ R K+VASWN +I YG HG ++ELFE+ML G++ ++ T +L ACSH GLV
Sbjct: 469 FDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLV 528
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
E GLE F M + ++ EHY CVVDML R+GR+ +A L+ ++P + + + +
Sbjct: 529 EDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLS 588
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C IHG L + + E+ KP+ +V++SN+ A G+W + +R MK+ +QK
Sbjct: 589 SCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKD 648
Query: 522 PGFSRVE 528
G S +E
Sbjct: 649 AGCSWIE 655
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 193/418 (46%), Gaps = 38/418 (9%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSA-RLVFDK 72
L C++ C L G+ +H + DL ++F + + L+ +Y CG V A + VFD
Sbjct: 211 LPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVF-VGNALIAMYGKCGLVEEAVKRVFDL 269
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ V N ++ A + ++A+ + M + + FT +L AC + + G
Sbjct: 270 MDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG 329
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+++H A + G D +G +L+ +Y CG +A+ +F GM R +VSW MI+GY
Sbjct: 330 EEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQN 389
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIA-----SYARRGDSNAAFAFFSRMTAEGFVP 247
DEA+ LF +M +G++P + + S R G FA + +T + FV
Sbjct: 390 GLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS 449
Query: 248 --------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
D+ +WN +I+G+ R EAL+LF+ ML G+K
Sbjct: 450 SSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 509
Query: 282 PNNVTVTGVLQAGGLTGSIQIGRE-IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA-R 339
P++ T TG+L A G ++ G E + ++ + + + ++DM + G + DA R
Sbjct: 510 PDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALR 569
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSACS 396
+ E+ + W++++ HG + ++ ++LE E + LIS L A S
Sbjct: 570 LIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGS 627
>gi|357472867|ref|XP_003606718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507773|gb|AES88915.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 294/507 (57%), Gaps = 4/507 (0%)
Query: 26 SKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
S++L+QGK++HALL TN F+L S L+ +Y CG ++ AR +FDKIP N+ +
Sbjct: 42 SRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIPQTNIHRWIAL 101
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI--VLKACVGLLDIKKGKQVHAVATQM 142
+ A G A+ FS M+ + + F I VLKAC + D G+QVH + +
Sbjct: 102 IATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQVHCLVLKC 161
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
FE D V +ALI MYSKCG + AR+VF GM +D+V+ +++SGY +EA+ L
Sbjct: 162 SFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLV 221
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
E MKL G+ PN T+NA+I+ +A++ D F M + PD+V+W +++SGF Q+
Sbjct: 222 ENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQN 281
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
R EA FK ML+ G P + T++ +L A ++ G+EIH +G+ D++
Sbjct: 282 FRNEEAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVR 341
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM- 381
SAL+DMY+KCG + +ARTLF KN + N+MI Y HG + +IELF +M EG+
Sbjct: 342 SALVDMYAKCGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVP 401
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
+ + +T + L+ACSH G +E G +F+ M+E+Y ++ EHYAC+VD+ R+G++ EAY
Sbjct: 402 KLDHLTFTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAY 461
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
+++ +P+ + GA C HG +LA + E+ ++LS++ A G
Sbjct: 462 GIIKSMPVKPDLFVWGALLAACRNHGHVELAEVAAKHLSELEPESAGNRLLLSSLYADAG 521
Query: 502 EWHEAENLRKIMKEKNVQKQPGFSRVE 528
W + E +++ +K+ ++K G S ++
Sbjct: 522 TWGKVERIKRRIKKGKLRKLQGLSWID 548
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/551 (35%), Positives = 299/551 (54%), Gaps = 42/551 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C LR GK++H LL + L++F++ + L +YA C V+ AR VFD++P
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM-TGLENMYAKCRQVHEARKVFDRMPER 199
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N +V + G + A+ +LM E + + T VL A L I+ GK++H
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIH 259
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + GF++ V++ AL+DMY+KCG L +AR +F GM ER+VVSW SMI Y
Sbjct: 260 GYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPK 319
Query: 197 EAVVLFERMKLEGLEP-----------------------------------NQFTYNAII 221
EA+V+F++M EG++P N N++I
Sbjct: 320 EAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLI 379
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ Y + + + A + F ++ + +V+WNAMI GFAQ+ R EAL F M +K
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSR----TIVSWNAMILGFAQNGRPIEALNYFSQMQARTVK 435
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ T V+ A + IH +V R L +VF +AL+DMY+KCG++ AR +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F++ ++V +WNAMI YG HG+ +++ELFE M + +R N VT +SV+SACSH GLV
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLV 555
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
E GL+ F MKE Y ++ S +HY +VD+L R+GR+ EA+D + Q+P+ ++ GA
Sbjct: 556 EAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C IH + A + E FE+ V+L+NI A W + +R M + ++K
Sbjct: 616 ACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 522 PGFSRVEKRNE 532
PG S VE +NE
Sbjct: 676 PGCSMVEIKNE 686
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 144/521 (27%), Positives = 249/521 (47%), Gaps = 56/521 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL +C K LR + L+ N L L ++KLV ++ G V+ A VF+ I
Sbjct: 43 LLERCSSLKELRH---ILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKL 99
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ M+ A + +A+ +F MR+ + F+ +LK C +++ GK++H
Sbjct: 100 NVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ + GF D+ L +MY+KC + AR+VF M ERD+VSW ++++GY
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIAS---------------YARRG--DS--NAAFAFF- 237
A+ + M E L+P+ T +++ + YA R DS N A A
Sbjct: 220 ALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVD 279
Query: 238 ----------SRMTAEGFVP-DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
+R+ +G + ++V+WN+MI + Q++ EA+ +F+ ML G+KP +V+
Sbjct: 280 MYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVS 339
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
V G L A G ++ GR IH L + L +V ++LI MY KC + A ++F +
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+ + SWNAMI + ++G ++ F +M ++ + T +SV++A + L
Sbjct: 400 SRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAE-------LS 452
Query: 407 IFRSMKERYGVK----ISKEHY--ACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAG 457
I K +GV + K + +VDM + G ++ A +D++ + + N+M
Sbjct: 453 ITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMI- 511
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+G HG A+ + EE + G +P+G LS I A
Sbjct: 512 ---DGYGTHGIGKAALELFEE-MQKGTIRPNGVTFLSVISA 548
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 136/275 (49%), Gaps = 9/275 (3%)
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
V + M+ GFA+ ++ALK F M ++P T +L+ G +++G+EIH L
Sbjct: 101 VLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
+ + G +D+F + L +MY+KC + +AR +F+ +++ SWN ++ Y ++GM +
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+E+ M EE ++ + +T++SVL A S L+ G EI R G +VD
Sbjct: 221 LEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEI-HGYAMRAGFDSLVNIATALVD 279
Query: 430 MLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
M + G + A +D + + + NSM A+ N A+ + ++ + G++
Sbjct: 280 MYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNEN----PKEAMVIFQKMLDEGVKP 335
Query: 487 PDGFVMLS-NICAADGEWHEAENLRKIMKEKNVQK 520
D VM + + CA G+ + K+ E + +
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELELDR 370
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 196/560 (35%), Positives = 298/560 (53%), Gaps = 44/560 (7%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDV 63
+ P +N L+ G AL+ GK VH+ +L + ++ + LV +YA CG
Sbjct: 341 VVPNRITYINVLNAFSGPA----ALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSY 396
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
R VF+K+ N ++ N M+ A GN++EA + M+ NK T+ I+L AC
Sbjct: 397 KDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNAC 456
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
V + G+++H+ + GF D+SV NALI MY++CG + AR +F+ M +D++SWT
Sbjct: 457 VNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWT 516
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS--------YARR-------- 227
+MI G EA+ +F+ M+ GL+PN+ TY +I+ + + RR
Sbjct: 517 AMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEA 576
Query: 228 -------------------GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
G A F RMT D+V +NAMI G+A EA
Sbjct: 577 GLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQR----DIVAYNAMIGGYAAHNLGKEA 632
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
LKLF + G+KP+ VT +L A +GS++ +EIH+LV + G D G+AL+
Sbjct: 633 LKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVST 692
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y+KCGS DA +F+ +NV SWNA+IG +HG ++LFERM EG++ + VT
Sbjct: 693 YAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTF 752
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+S+LSACSH GL+E+G F SM +G+ + EHY C+VD+L R+G++ E L++ +P
Sbjct: 753 VSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMP 812
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
+ GA C IHG +A E ++ +V LS++ AA G W A
Sbjct: 813 FQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAK 872
Query: 509 LRKIMKEKNVQKQPGFSRVE 528
LRK+M+++ V K+PG S +E
Sbjct: 873 LRKLMEQRGVTKEPGRSWIE 892
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 267/532 (50%), Gaps = 60/532 (11%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLV----------GVYAGCGDVNSARLV 69
LG+ + L K AL C ++++ ++K++L+ +YA CG ++ AR V
Sbjct: 242 LGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREV 301
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
FDK+ +V ++ A G+ + A F M++ N+ T+ VL A G +
Sbjct: 302 FDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAAL 361
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
K GK VH+ G E+D++VG AL+ MY+KCG R+VF + RD+++W +MI G
Sbjct: 362 KWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 421
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------------- 217
+EA ++ +M+ EG+ PN+ TY
Sbjct: 422 AEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDI 481
Query: 218 ---NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
NA+I+ YAR G A F++M + D+++W AMI G A+S EAL +F+
Sbjct: 482 SVQNALISMYARCGSIKDARLLFNKMVRK----DIISWTAMIGGLAKSGLGAEALAVFQD 537
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M +G+KPN VT T +L A ++ GR IH V GL D + L++MYS CGS
Sbjct: 538 MQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGS 597
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
+KDAR +F+ +++ ++NAMIG Y H + +++LF+R+ EEG++ ++VT I++L+A
Sbjct: 598 VKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNA 657
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYV 451
C++ G +E EI S+ + G +V + G +A +D + + +
Sbjct: 658 CANSGSLEWAKEI-HSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVIS 716
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADG 501
N++ G GC HGR + + E G+ KPD FV L + C+ G
Sbjct: 717 WNAIIG----GCAQHGRGQDVLQLFERMKMEGI-KPDIVTFVSLLSACSHAG 763
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 154/539 (28%), Positives = 261/539 (48%), Gaps = 60/539 (11%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALL---CTNDLNIFSLKSKLVGVYAGCGDVNSARL 68
S +Y+ +L +C++ K L G++VH + CT L+ +++ + L+ +Y CG + AR
Sbjct: 141 SCDYMK-MLKRCIEVKDLVAGREVHEHIIQHCTV-LDQYTVNA-LINMYIQCGSIEEARQ 197
Query: 69 VFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
V++K+ + + +W M + G +EA+ M++ + T +L +C
Sbjct: 198 VWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSP 257
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
++ G+++H A + DV+V N +++MY+KCG + AR VF M + VVSWT +I
Sbjct: 258 SALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIII 317
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------------- 217
GY + + A +F++M+ EG+ PN+ TY
Sbjct: 318 GGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHE 377
Query: 218 ------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
A++ YA+ G F ++ DL+ WN MI G A+ EA ++
Sbjct: 378 SDLAVGTALVKMYAKCGSYKDCRQVFEKLVNR----DLIAWNTMIGGLAEGGNWEEASEI 433
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
+ M G+ PN +T +L A ++ GREIH+ V + G D+ +ALI MY++
Sbjct: 434 YHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYAR 493
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
CGS+KDAR LF K++ SW AMIG K G+ ++ +F+ M + G++ N VT S+
Sbjct: 494 CGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSI 553
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVP 448
L+ACS ++ G I + + E G+ +V+M G + +A +D + Q
Sbjct: 554 LNACSSPAALDWGRRIHQQVIEA-GLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRD 612
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADG--EW 503
+ N+M G + H A+ + + E GL KPD ++ + N CA G EW
Sbjct: 613 IVAYNAMIGGYA----AHNLGKEALKLFDRLQEEGL-KPDKVTYINMLNACANSGSLEW 666
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 178/369 (48%), Gaps = 44/369 (11%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
R N + +LK C+ + D+ G++VH Q D NALI+MY +CG + AR+
Sbjct: 138 RVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQ 197
Query: 170 VFHGM--FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------- 217
V++ + ER V SW +M+ GY ++EA+ L M+ GL + T
Sbjct: 198 VWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSP 257
Query: 218 -------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
N I+ YA+ G + A F +M + +V+W
Sbjct: 258 SALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKS----VVSW 313
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
+I G+A A ++F+ M G+ PN +T VL A +++ G+ +H+ +
Sbjct: 314 TIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILN 373
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
G D+ G+AL+ MY+KCGS KD R +FE +++ +WN MIG + G + + E+
Sbjct: 374 AGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEI 433
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDML 431
+ +M EGM N++T + +L+AC + + G EI R +K+ + IS ++ ++ M
Sbjct: 434 YHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQN--ALISMY 491
Query: 432 CRSGRMVEA 440
R G + +A
Sbjct: 492 ARCGSIKDA 500
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 100/188 (53%), Gaps = 9/188 (4%)
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
++ A+ + + + G + N+ +L+ + GRE+H + + +D +T +A
Sbjct: 122 KDRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNA 181
Query: 325 LIDMYSKCGSLKDARTLFEITRI--KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
LI+MY +CGS+++AR ++ + V SWNAM+ Y ++G ++ +++L M + G+
Sbjct: 182 LINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLA 241
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIF-RSMKER--YGVKISKEHYACVVDMLCRSGRMVE 439
T + +LS+C +E G EI +MK R + V ++ C+++M + G + E
Sbjct: 242 LGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVAN----CILNMYAKCGSIHE 297
Query: 440 AYDLLRQV 447
A ++ ++
Sbjct: 298 AREVFDKM 305
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 310/549 (56%), Gaps = 38/549 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C + L++GK++H L TN N+F++ + +V +YA C ++ A +FD++P
Sbjct: 153 LLKVCGDNADLKRGKEIHGQLITNSFAANVFAM-TGVVNMYAKCRQIDDAYKMFDRMPER 211
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQ 134
++ N ++ + G ++A+ M++ R + T VL A VGLL + GK
Sbjct: 212 DLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV--GKS 269
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H A + GF V++ AL DMYSKCG + +AR +F GM ++ VVSW SM+ GY +
Sbjct: 270 IHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGE 329
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------SNA 232
++A+ +FE+M EG++P T + + A GD N+
Sbjct: 330 PEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNS 389
Query: 233 AFAFFSRMTAEGFVPDL---------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ +S+ D+ V+WNAMI G+AQ+ R +EAL F M G+KP+
Sbjct: 390 LISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPD 449
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+ T+ V+ A + + IH L+ R L ++F +AL+DMYSKCG++ AR LF+
Sbjct: 450 SFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFD 509
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ ++V +WNAMI YG HG+ ++++LF++M + + N++T +SV+SACSH GLV++
Sbjct: 510 MISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDE 569
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
GL F+SMK+ YG++ S +HY +VD+L R+GR+ EA+D + +P+ ++ GA C
Sbjct: 570 GLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGAC 629
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
IH ++ ++ FE+ + V+L+NI A+ +W + +RK M++K ++K PG
Sbjct: 630 KIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPG 689
Query: 524 FSRVEKRNE 532
S VE RNE
Sbjct: 690 CSVVELRNE 698
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 145/540 (26%), Positives = 248/540 (45%), Gaps = 58/540 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C K L Q + L+ N L N ++KLV +++ G +N A VF+ I +
Sbjct: 55 LLELCTSMKELHQ---IIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ + M+ A + + A+ + MR + + F+ +LK C D+K+GK++H
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
F +V +++MY+KC + A ++F M ERD+VSW ++I+G+ +
Sbjct: 172 QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 198 AVVLFERMKLEGLEPNQFTY---------------------NAIIASYARRGDSNAAFAF 236
A+ L RM+ EG P+ T AI A +A+ + + A A
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 237 F---------SRMTAEGF-VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
+R+ +G +V+WN+M+ G+ Q+ +A+ +F+ ML GI P VT
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ L A G ++ G+ +H V ++ L D+ ++LI MYSKC + A +F
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLN 411
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+ SWNAMI Y ++G V ++ F M GM+ + T++SV+ A + L
Sbjct: 412 GRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAE-------LS 464
Query: 407 IFRSMKERYGVKI----SKEHY--ACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAG 457
+ R K +G+ I K + +VDM + G + A +D++ + N+M
Sbjct: 465 VTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMI- 523
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR--KIMKE 515
+G HG A+ + ++ + G +P+ LS I A E LR K MK+
Sbjct: 524 ---DGYGTHGLGRAALDLFDK-MKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQ 579
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 194/521 (37%), Positives = 288/521 (55%), Gaps = 19/521 (3%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDK 72
NYL LL C++SK+L + K++H N N S+ KL +Y C V AR +FD+
Sbjct: 10 NYLH-LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
IPNP+V + N ++ A A+ G F AI + M R NK+T+ VLKAC GLL I+ G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
++H+ A G E+DV V AL+D Y+KCG+L A+R+F M RDVV+W +MI+G
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-----YARRGDSNAAFAFFSRMTAEGFVP 247
D+AV L +M+ EG+ PN T ++ + YAR+ F M V
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARK--------IFDVMG----VR 236
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
+ V+W+AMI G+ S EAL +F+ M +SGI P+ T+ GVL A ++Q G H
Sbjct: 237 NEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSH 296
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+ G D +ALIDMYSKCG + AR +F ++ SWNAMI YG HG+
Sbjct: 297 GYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 356
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
++ LF +L G++ +++T I +LS+CSH GLV +G F +M + + EH C+
Sbjct: 357 EALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICM 416
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
VD+L R+G + EA+ +R +P + A + C IH +L + ++ +G
Sbjct: 417 VDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPEST 476
Query: 488 DGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
FV+LSNI +A G W +A ++R K+ ++K PG S +E
Sbjct: 477 GNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIE 517
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 310/549 (56%), Gaps = 38/549 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C + L++GK++H L TN N+F++ + +V +YA C ++ A +FD++P
Sbjct: 153 LLKVCGDNADLKRGKEIHGQLITNSFAANVFAM-TGVVNMYAKCRQIDDAYKMFDRMPER 211
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQ 134
++ N ++ + G ++A+ M++ R + T VL A VGLL + GK
Sbjct: 212 DLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV--GKS 269
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H A + GF V++ AL DMYSKCG + +AR +F GM ++ VVSW SM+ GY +
Sbjct: 270 IHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGE 329
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------SNA 232
++A+ +FE+M EG++P T + + A GD N+
Sbjct: 330 PEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNS 389
Query: 233 AFAFFSRMTAEGFVPDL---------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ +S+ D+ V+WNAMI G+AQ+ R +EAL F M G+KP+
Sbjct: 390 LISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPD 449
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+ T+ V+ A + + IH L+ R L ++F +AL+DMYSKCG++ AR LF+
Sbjct: 450 SFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFD 509
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ ++V +WNAMI YG HG+ ++++LF++M + + N++T +SV+SACSH GLV++
Sbjct: 510 MISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDE 569
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
GL F+SMK+ YG++ S +HY +VD+L R+GR+ EA+D + +P+ ++ GA C
Sbjct: 570 GLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGAC 629
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
IH ++ ++ FE+ + V+L+NI A+ +W + +RK M++K ++K PG
Sbjct: 630 KIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPG 689
Query: 524 FSRVEKRNE 532
S VE RNE
Sbjct: 690 CSVVELRNE 698
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 145/540 (26%), Positives = 248/540 (45%), Gaps = 58/540 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C K L Q + L+ N L N ++KLV +++ G +N A VF+ I +
Sbjct: 55 LLELCTSMKELHQ---IIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ + M+ A + + A+ + MR + + F+ +LK C D+K+GK++H
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
F +V +++MY+KC + A ++F M ERD+VSW ++I+G+ +
Sbjct: 172 QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 198 AVVLFERMKLEGLEPNQFTY---------------------NAIIASYARRGDSNAAFAF 236
A+ L RM+ EG P+ T AI A +A+ + + A A
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 237 F---------SRMTAEGF-VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
+R+ +G +V+WN+M+ G+ Q+ +A+ +F+ ML GI P VT
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ L A G ++ G+ +H V ++ L D+ ++LI MYSKC + A +F
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLN 411
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+ SWNAMI Y ++G V ++ F M GM+ + T++SV+ A + L
Sbjct: 412 GRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAE-------LS 464
Query: 407 IFRSMKERYGVKI----SKEHY--ACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAG 457
+ R K +G+ I K + +VDM + G + A +D++ + N+M
Sbjct: 465 VTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMI- 523
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR--KIMKE 515
+G HG A+ + ++ + G +P+ LS I A E LR K MK+
Sbjct: 524 ---DGYGTHGLGRAALDLFDK-MKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQ 579
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 277/483 (57%), Gaps = 6/483 (1%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
+L KL+ Y+ G+ + AR +FD+ NV N M+ + + EA+ F +M
Sbjct: 72 TLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSC 131
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
+ + +TF VLKAC GL +++ G QVH ++G + ++ +GNAL+ MY KCG L A
Sbjct: 132 AFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREA 191
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAI--IASYA 225
R+V M RDVVSW SM++GY + D+A+ + + M L + T ++ + Y
Sbjct: 192 RKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYT 251
Query: 226 RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ F RMT + +L++WN MI+ + + NEA+ LF M G+KP+ V
Sbjct: 252 SLENVQYIHNMFERMTKK----NLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAV 307
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T+ +L A G ++ +GR +H + + L ++ +AL+DMY+KCG L++AR +F+
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKM 367
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
R+++V SW +M+ YG+ G ++ LF +ML+ G + + +SVLSACSH GL+++G
Sbjct: 368 RLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR 427
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
FR M E+YG+ EH+AC+VD+ R+G + EAY ++Q+PM + GA + C +
Sbjct: 428 HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 487
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
H + D+ + + F++ ++ +V+LSNI A G W + N+R MK+ ++K PG S
Sbjct: 488 HSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 547
Query: 526 RVE 528
VE
Sbjct: 548 NVE 550
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 166/358 (46%), Gaps = 15/358 (4%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C+L C LR G QVH + D N+F + + LV +Y CG + AR V D++P
Sbjct: 142 CVLKACSGLDNLRVGLQVHDAIVKVGLDTNLF-IGNALVAMYGKCGCLREARKVLDQMPY 200
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V N MV A +G F +A+ M + T + L V ++ + +
Sbjct: 201 RDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMA-SLSPVVCYTSLENVQYI 259
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE----RDVVSWTSMISGYCN 191
H + +M +N +S N +I +Y + A +F M E D V+ S++ +
Sbjct: 260 HNMFERMTKKNLIS-WNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGD 318
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
+S + L + ++ L+PN NA++ YA+ G A F +M + D+V+
Sbjct: 319 LSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMR----LRDVVS 374
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
W +M+S + +S + +A+ LF ML SG P+++ VL A TG + GR ++
Sbjct: 375 WTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMT 434
Query: 312 -RMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVD 367
+ G+ + + ++D++ + G +++A + ++ N W A++ H +D
Sbjct: 435 EQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMD 492
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 195/432 (45%), Gaps = 28/432 (6%)
Query: 99 GYFSLMREFIYRCNKFTFSIVLKACVGLLD----IKKGKQVHA-VATQMGFENDVSVGNA 153
G+ SL R R FS +AC +LD IK ++H+ + D ++
Sbjct: 19 GFVSLTRIRFDRLKVEVFS--KEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIK 76
Query: 154 LIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN 213
L+ YS G AR +F E++VV + MI Y N + EA+ +F+ M P+
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 214 QFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
+T+ ++ + + + + G +L NA+++ + + EA K+
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL--IDMYSK 331
M + N V G Q+G +++I +E+ +L L+ D T ++L + Y+
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSL----NLNHDAGTMASLSPVVCYTS 252
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
+++ +FE KN+ SWN MI Y + M + ++ LF +M E GM+ + VT+ S+
Sbjct: 253 LENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASL 312
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL-----LRQ 446
L AC + G + + + E+ ++ + ++DM + G + EA D+ LR
Sbjct: 313 LPACGDLSALFLGRRLHKYI-EKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRD 371
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWH 504
V + T+ M+ R+G AV + + + G + PD FV + + C+ G
Sbjct: 372 VVSW-TSMMSAYGRSGQGYD-----AVALFAKMLDSG-QNPDSIAFVSVLSACSHTGLLD 424
Query: 505 EAENLRKIMKEK 516
+ + ++M E+
Sbjct: 425 QGRHYFRMMTEQ 436
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 277/483 (57%), Gaps = 6/483 (1%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
+L KL+ Y+ G+ + AR +FD+ NV N M+ + + EA+ F +M
Sbjct: 72 TLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSC 131
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
+ + +TF VLKAC GL +++ G QVH ++G + ++ +GNAL+ MY KCG L A
Sbjct: 132 AFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREA 191
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAI--IASYA 225
R+V M RDVVSW SM++GY + D+A+ + + M L + T ++ + Y
Sbjct: 192 RKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYT 251
Query: 226 RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ F RMT + +L++WN MI+ + + NEA+ LF M G+KP+ V
Sbjct: 252 SLENVQYIHNMFERMTKK----NLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAV 307
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T+ +L A G ++ +GR +H + + L ++ +AL+DMY+KCG L++AR +F+
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 367
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
R+++V SW +M+ YG+ G ++ LF +ML+ G + + +SVLSACSH GL+++G
Sbjct: 368 RLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR 427
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
FR M E+YG+ EH+AC+VD+ R+G + EAY ++Q+PM + GA + C +
Sbjct: 428 HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 487
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
H + D+ + + F++ ++ +V+LSNI A G W + N+R MK+ ++K PG S
Sbjct: 488 HSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 547
Query: 526 RVE 528
VE
Sbjct: 548 NVE 550
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 165/358 (46%), Gaps = 15/358 (4%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C+L C LR G QVH + D N+F + + LV +Y CG + AR V D++P
Sbjct: 142 CVLKACSGLDNLRVGLQVHDAIVKVGLDTNLF-IGNALVAMYGKCGCLREARKVLDQMPY 200
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V N MV A +G F +A+ M + T + L V ++ + +
Sbjct: 201 RDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMA-SLSPVVCYTSLENVQYI 259
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE----RDVVSWTSMISGYCN 191
H + +M +N +S N +I +Y + A +F M E D V+ S++ +
Sbjct: 260 HNMFERMTKKNLIS-WNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGD 318
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
+S + L + ++ L PN NA++ YA+ G A F +M + D+V+
Sbjct: 319 LSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMR----LRDVVS 374
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
W +M+S + +S + +A+ LF ML SG P+++ VL A TG + GR ++
Sbjct: 375 WTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMT 434
Query: 312 -RMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVD 367
+ G+ + + ++D++ + G +++A + ++ N W A++ H +D
Sbjct: 435 EQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMD 492
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 187/410 (45%), Gaps = 26/410 (6%)
Query: 121 KACVGLLD----IKKGKQVHA-VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+AC +LD IK ++H+ + D ++ L+ YS G AR +F
Sbjct: 39 EACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSL 98
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
E++VV + MI Y N + EA+ +F+ M P+ +T+ ++ + + +
Sbjct: 99 EKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQ 158
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
+ G +L NA+++ + + EA K+ M + N V G Q+G
Sbjct: 159 VHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQ 218
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSAL--IDMYSKCGSLKDARTLFEITRIKNVASW 353
+++I +E+ +L L+ D T ++L + Y+ +++ +FE KN+ SW
Sbjct: 219 FDDALEICKEMDSL----NLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISW 274
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
N MI Y + M + ++ LF +M E GM+ + VT+ S+L AC + G + + + E
Sbjct: 275 NVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYI-E 333
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDL-----LRQVPMYVTNSMAGAFRNGCNIHGR 468
+ ++ + ++DM + G + EA D+ LR V + T+ M+ R+G
Sbjct: 334 KGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSW-TSMMSAYGRSGQGYD-- 390
Query: 469 RDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKEK 516
AV + + + G + PD FV + + C+ G + + ++M E+
Sbjct: 391 ---AVALFAKMLDSG-QNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQ 436
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 194/551 (35%), Positives = 296/551 (53%), Gaps = 42/551 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C LR GK++H LL + L++F++ + L +YA C VN AR VFD++P
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM-TGLENMYAKCRQVNEARKVFDRMPER 199
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N +V + G + A+ M E + + T VL A L I GK++H
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + GF++ V++ AL+DMY+KCG L +AR++F GM ER+VVSW SMI Y
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPK 319
Query: 197 EAVVLFERMKLEGLEP-----------------------------------NQFTYNAII 221
EA+++F++M EG++P N N++I
Sbjct: 320 EAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLI 379
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ Y + + + A + F ++ + LV+WNAMI GFAQ+ R +AL F M +K
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSR----TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ T V+ A + IH +V R L +VF +AL+DMY+KCG++ AR +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F++ ++V +WNAMI YG HG +++ELFE M + ++ N VT +SV+SACSH GLV
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
E GL+ F MKE Y +++S +HY +VD+L R+GR+ EA+D + Q+P+ ++ GA
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C IH + A E FE+ V+L+NI A W + +R M + ++K
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 522 PGFSRVEKRNE 532
PG S VE +NE
Sbjct: 676 PGCSMVEIKNE 686
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/525 (27%), Positives = 244/525 (46%), Gaps = 64/525 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL +C K LRQ + L+ N L ++KLV ++ G V+ A VF+ I +
Sbjct: 43 LLERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ + M+ A + +A+ +F MR + F+ +LK C +++ GK++H
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ + GF D+ L +MY+KC + AR+VF M ERD+VSW ++++GY
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
A+ + + M E L+P+ T A++
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA+ G A F M ++V+WN+MI + Q++ EA+ +F+ ML G+KP
Sbjct: 280 MYAKCGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+V+V G L A G ++ GR IH L +GL +V ++LI MY KC + A ++F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ + + SWNAMI + ++G ++ F +M ++ + T +SV++A +
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE----- 450
Query: 403 KGLEIFRSMKERYGVK----ISKEHY--ACVVDMLCRSGRMVEA---YDLLRQVPMYVTN 453
L I K +GV + K + +VDM + G ++ A +D++ + + N
Sbjct: 451 --LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWN 508
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+M +G HG A+ + EE + G KP+G LS I A
Sbjct: 509 AMI----DGYGTHGFGKAALELFEE-MQKGTIKPNGVTFLSVISA 548
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 151/311 (48%), Gaps = 13/311 (4%)
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
GL F +++ + R G + A F + ++ V ++ M+ GFA+ ++A
Sbjct: 64 GLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNV----LYHTMLKGFAKVSDLDKA 119
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L+ F M ++P T +L+ G +++G+EIH L+ + G +D+F + L +M
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y+KC + +AR +F+ +++ SWN ++ Y ++GM ++E+ + M EE ++ + +T+
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLR 445
+SVL A S L+ G EI R G +VDM + G + A +D +
Sbjct: 240 VSVLPAVSALRLISVGKEI-HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS-NICAADGEWH 504
+ + NSM A+ N A+ + ++ + G++ D VM + + CA G+
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKE----AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLE 354
Query: 505 EAENLRKIMKE 515
+ K+ E
Sbjct: 355 RGRFIHKLSVE 365
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/552 (32%), Positives = 294/552 (53%), Gaps = 40/552 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
+ LL C L++G Q+H+ L ++ + ++ L+ +Y CGDV +A ++F+
Sbjct: 247 ISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD 306
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NV + N M++A + ++ F M+ R N+FT+ +L+ C +I G+Q
Sbjct: 307 RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ 366
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H+++ + GFE+D+ V LIDMYSK G L ARRV + E+DVVSWTSMI+GY
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426
Query: 195 VDEAVVLFERMKLEGLEPNQF-----------------------------------TYNA 219
+A+ F+ M+ G+ P+ +NA
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNA 486
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YAR G AF+ F + + D +TWN ++SGFAQS EALK+F M SG
Sbjct: 487 LVNLYARCGRIREAFSSFEEIEHK----DEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+K N T L A I+ G++IHA V + G + G+ALI +Y KCGS +DA+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
F +N SWN +I +HG +++LF++M +EG++ N+VT I VL+ACSH G
Sbjct: 603 MEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVE+GL F+SM + YG++ +HYACV+D+ R+G++ A + ++P+ +
Sbjct: 663 LVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTL 722
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ C +H ++ + E+ +V+LSN A +W + +RK+M+++ V+
Sbjct: 723 LSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVR 782
Query: 520 KQPGFSRVEKRN 531
K+PG S +E +N
Sbjct: 783 KEPGRSWIEVKN 794
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 214/449 (47%), Gaps = 39/449 (8%)
Query: 34 QVHALLCTNDLNIFSLKSKL-VGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTG 92
++HA T L + + L + +Y+ G V AR VF+++ + ++W+ M S +
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARD--NVSWVAMLSGYAQ 120
Query: 93 NF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
N +EA+G + M + S VL +C +G+ +HA + GF +++ V
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
GNA+I +Y +CG A RVF M RD V++ ++ISG+ + A+ +FE M+ GL
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD---------------------- 248
P+ T ++++A+ A GD S + G D
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300
Query: 249 ---------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
+V WN M+ F Q ++ +LF M +GI+PN T +L+ T
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
I +G +IH+L + G D++ LIDMYSK G L+ AR + E+ + K+V SW +MI
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVK 418
Y +H ++ F+ M + G+ + + L S +S C+ + +GL+I R Y
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGD 480
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
+S + +V++ R GR+ EA+ ++
Sbjct: 481 VSI--WNALVNLYARCGRIREAFSSFEEI 507
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 211/428 (49%), Gaps = 40/428 (9%)
Query: 16 LDCLLGKCMKSKALRQGKQVHAL-----LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
L +L C K++ QG+ +HA C+ IF + + ++ +Y CG A VF
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCS---EIF-VGNAVITLYLRCGSFRLAERVF 201
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+P+ + N ++ A G+ + A+ F M+ + T S +L AC L D++
Sbjct: 202 CDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQ 261
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
KG Q+H+ + G +D + +L+D+Y KCG + +A +F+ +VV W M+ +
Sbjct: 262 KGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFG 321
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAII--ASYARRGDSNAAF-------AFFSRMT 241
++ + ++ LF +M+ G+ PNQFTY I+ + R D F S M
Sbjct: 322 QINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMY 381
Query: 242 AEGFV----------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
G + D+V+W +MI+G+ Q + +AL FK M G
Sbjct: 382 VSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG 441
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I P+N+ + + +++ G +IHA + G DV +AL+++Y++CG +++A
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+ FE K+ +WN ++ + + G+ + ++++F RM + G++ N T +S LSA ++
Sbjct: 502 SSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561
Query: 400 LVEKGLEI 407
+++G +I
Sbjct: 562 EIKQGKQI 569
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 182/393 (46%), Gaps = 55/393 (13%)
Query: 116 FSIVLKACVGLLDIKKGK------QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
F+ L+AC G G+ ++HA A G VGN LID+YSK GL+ ARR
Sbjct: 44 FACALRACRG-----NGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARR 98
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ--------------- 214
VF + RD VSW +M+SGY +EA+ L+ +M G+ P
Sbjct: 99 VFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAEL 158
Query: 215 --------------------FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
F NA+I Y R G A F M D VT+N
Sbjct: 159 FAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR----DTVTFNT 214
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
+ISG AQ AL++F+ M SG+ P+ VT++ +L A G +Q G ++H+ + + G
Sbjct: 215 LISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAG 274
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+ D +L+D+Y KCG ++ A +F + NV WN M+ +G+ + S ELF
Sbjct: 275 ISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFC 334
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
+M G+R N+ T +L C+ ++ G +I S+ + G + ++DM +
Sbjct: 335 QMQAAGIRPNQFTYPCILRTCTCTREIDLGEQI-HSLSVKTGFESDMYVSGVLIDMYSKY 393
Query: 435 GRMVEAYDLLRQVP----MYVTNSMAGAFRNGC 463
G + +A +L + + T+ +AG ++ C
Sbjct: 394 GWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/552 (32%), Positives = 294/552 (53%), Gaps = 40/552 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
+ LL C L++G Q+H+ L ++ + ++ L+ +Y CGDV +A ++F+
Sbjct: 247 ISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD 306
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NV + N M++A + ++ F M+ R N+FT+ +L+ C +I G+Q
Sbjct: 307 RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ 366
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H+++ + GFE+D+ V LIDMYSK G L ARRV + E+DVVSWTSMI+GY
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426
Query: 195 VDEAVVLFERMKLEGLEPNQF-----------------------------------TYNA 219
+A+ F+ M+ G+ P+ +NA
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNA 486
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YAR G AF+ F + + D +TWN ++SGFAQS EALK+F M SG
Sbjct: 487 LVNLYARCGRIREAFSSFEEIEHK----DEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+K N T L A I+ G++IHA V + G + G+ALI +Y KCGS +DA+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
F +N SWN +I +HG +++LF++M +EG++ N+VT I VL+ACSH G
Sbjct: 603 MEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVE+GL F+SM + YG++ +HYACV+D+ R+G++ A + ++P+ +
Sbjct: 663 LVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTL 722
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ C +H ++ + E+ +V+LSN A +W + +RK+M+++ V+
Sbjct: 723 LSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVR 782
Query: 520 KQPGFSRVEKRN 531
K+PG S +E +N
Sbjct: 783 KEPGRSWIEVKN 794
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 214/449 (47%), Gaps = 39/449 (8%)
Query: 34 QVHALLCTNDLNIFSLKSKL-VGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTG 92
++HA T L + + L + +Y+ G V AR VF+++ + ++W+ M S +
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARD--NVSWVAMLSGYAQ 120
Query: 93 NF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
N +EA+G + M + S VL +C +G+ +HA + GF +++ V
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
GNA+I +Y +CG A RVF M RD V++ ++ISG+ + A+ +FE M+ GL
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD---------------------- 248
P+ T ++++A+ A GD S + G D
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300
Query: 249 ---------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
+V WN M+ F Q ++ +LF M +GI+PN T +L+ T
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
I +G +IH+L + G D++ LIDMYSK G L+ AR + E+ + K+V SW +MI
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVK 418
Y +H ++ F+ M + G+ + + L S +S C+ + +GL+I R Y
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGD 480
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
+S + +V++ R GR+ EA+ ++
Sbjct: 481 VSI--WNALVNLYARCGRIREAFSSFEEI 507
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 211/428 (49%), Gaps = 40/428 (9%)
Query: 16 LDCLLGKCMKSKALRQGKQVHAL-----LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
L +L C K++ QG+ +HA C+ IF + + ++ +Y CG A VF
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCS---EIF-VGNAVITLYLRCGSFRLAERVF 201
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+P+ + N ++ A G+ + A+ F M+ + T S +L AC L D++
Sbjct: 202 CDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQ 261
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
KG Q+H+ + G +D + +L+D+Y KCG + +A +F+ +VV W M+ +
Sbjct: 262 KGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFG 321
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAII--ASYARRGDSNAAF-------AFFSRMT 241
++ + ++ LF +M+ G+ PNQFTY I+ + R D F S M
Sbjct: 322 QINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMY 381
Query: 242 AEGFV----------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
G + D+V+W +MI+G+ Q + +AL FK M G
Sbjct: 382 VSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG 441
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I P+N+ + + +++ G +IHA + G DV +AL+++Y++CG +++A
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+ FE K+ +WN ++ + + G+ + ++++F RM + G++ N T +S LSA ++
Sbjct: 502 SSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561
Query: 400 LVEKGLEI 407
+++G +I
Sbjct: 562 EIKQGKQI 569
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 182/393 (46%), Gaps = 55/393 (13%)
Query: 116 FSIVLKACVGLLDIKKGK------QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
F+ L+AC G G+ ++HA A G VGN LID+YSK GL+ ARR
Sbjct: 44 FACALRACRG-----NGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARR 98
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ--------------- 214
VF + RD VSW +M+SGY +EA+ L+ +M G+ P
Sbjct: 99 VFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAEL 158
Query: 215 --------------------FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
F NA+I Y R G A F M D VT+N
Sbjct: 159 FAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR----DTVTFNT 214
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
+ISG AQ AL++F+ M SG+ P+ VT++ +L A G +Q G ++H+ + + G
Sbjct: 215 LISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAG 274
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+ D +L+D+Y KCG ++ A +F + NV WN M+ +G+ + S ELF
Sbjct: 275 ISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFC 334
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
+M G+R N+ T +L C+ ++ G +I S+ + G + ++DM +
Sbjct: 335 QMQAAGIRPNQFTYPCILRTCTCTREIDLGEQI-HSLSVKTGFESDMYVSGVLIDMYSKY 393
Query: 435 GRMVEAYDLLRQVP----MYVTNSMAGAFRNGC 463
G + +A +L + + T+ +AG ++ C
Sbjct: 394 GWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/513 (34%), Positives = 284/513 (55%), Gaps = 8/513 (1%)
Query: 28 ALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
AL +GKQ HA+ N L++ + L S ++ Y+ G + A LVF ++ +V + W ++
Sbjct: 298 ALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDV--VTWNLL 355
Query: 87 ASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
S++ + Q +A+ LMR R + T S +L A +IK GK+ H +
Sbjct: 356 ISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNL 415
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
E+DV V N++IDMY+KC + AR+VF ERD+V W ++++ Y V EA+ LF +
Sbjct: 416 ESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQ 475
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M+ + + PN ++N++I + R G N A FS+M + GF P+L+TW +ISG AQS
Sbjct: 476 MQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGF 535
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
EA+ F+ M +GI+P+ ++T VL A S+ GR IH + R + V ++
Sbjct: 536 GYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATS 595
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+DMY+KCGS+ +A+ +F + K + +NAMI Y HG ++ LF+ + +EG+ +
Sbjct: 596 LVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPD 655
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
+T S+LSACSH GLV +GL +F M ++ + EHY CVV +L R G + EA L+
Sbjct: 656 SITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLI 715
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+P + G+ C H +L + + F++ +V LSN AA G W
Sbjct: 716 LTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWV 775
Query: 505 EAENLRKIMKEKNVQKQPGFSRVE---KRNEFV 534
E N+R +MK + ++K PG S ++ K N FV
Sbjct: 776 EVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFV 808
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 230/461 (49%), Gaps = 45/461 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIP 74
LL C+ +AL G+Q+HA + N + F+ +++KLV YA C A +F ++
Sbjct: 85 LLQGCVYERALHTGQQIHARILKNG-DFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLR 143
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NVF +V G ++A+ F M+E + F VLKAC L I GK
Sbjct: 144 VRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKG 203
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH +MGF V V ++L+DMY KCG+L AR+VF M E++VV+W SMI GY
Sbjct: 204 VHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGL 263
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
EA+ +F M++EG+EP + T ++
Sbjct: 264 NQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSS 323
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
II Y++ G A FSRM + D+VTWN +IS + Q + +AL + M
Sbjct: 324 IINFYSKVGLIEDAELVFSRMLEK----DVVTWNLLISSYVQHHQVGKALNMCHLMRSEN 379
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
++ ++VT++ +L A +T +I++G+E H R L DV +++IDMY+KC + DAR
Sbjct: 380 LRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDAR 439
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ T +++ WN ++ Y + G+ +++LF +M + + N ++ SV+ G
Sbjct: 440 KVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNG 499
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
V + ++F M + G + + + ++ L +SG EA
Sbjct: 500 QVNEAKDMFSQM-QSLGFQPNLITWTTLISGLAQSGFGYEA 539
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 189/413 (45%), Gaps = 55/413 (13%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG--FENDVS 149
G+ QE++ S M ++ + +L+ CV + G+Q+HA + G F +
Sbjct: 58 GHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEY 117
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
V L+ Y+KC A R+FH + R+V SW +++ C + ++A++ F M+ G
Sbjct: 118 VETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENG 177
Query: 210 LEPNQFTY-----------------------------------NAIIASYARRGDSNAAF 234
+ P+ F ++++ Y + G A
Sbjct: 178 VFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDAR 237
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F M + ++VTWN+MI G+ Q+ EA+ +F M V GI+P VTV L A
Sbjct: 238 KVFDSMVEK----NVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSAS 293
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
++ G++ HA+ L +D GS++I+ YSK G ++DA +F K+V +WN
Sbjct: 294 ANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWN 353
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE-----IFR 409
+I Y +H V ++ + M E +R + VTL S+LSA + ++ G E I R
Sbjct: 354 LLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRR 413
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
+++ V S ++DM + R+ +A +D + + + N++ A+
Sbjct: 414 NLESDVVVANS------IIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAY 460
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/566 (33%), Positives = 303/566 (53%), Gaps = 44/566 (7%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAG 59
+N +I + + LL +C + ++L QG++VHA + + + L++ L+ +YA
Sbjct: 84 LNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAK 143
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFS 117
CG + AR VFD I + N+ ++W M AF Q EA + M+ + +K TF
Sbjct: 144 CGSLTDARRVFDGIRDRNI--VSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFV 201
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
+L A ++ G++VH + G E + VG +L+ MY+KCG + A+ +F + E+
Sbjct: 202 SLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEK 261
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------- 217
+VV+WT +I+GY +VD A+ L E+M+ + PN+ TY
Sbjct: 262 NVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVH 321
Query: 218 ---------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
NA+I Y + G A F + D+VTW AM++G+AQ
Sbjct: 322 RYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHR----DVVTWTAMVTGYAQL 377
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
+EA+ LF+ M GIKP+ +T T L + +Q G+ IH + G +DV+
Sbjct: 378 GFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQ 437
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
SAL+ MY+KCGS+ DAR +F +NV +W AMI +HG ++E FE+M ++G++
Sbjct: 438 SALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIK 497
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
++VT SVLSAC+H GLVE+G + FRSM YG+K EHY+C VD+L R+G + EA +
Sbjct: 498 PDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAEN 557
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
++ +P S+ GA + C IH + E ++ +V LSNI AA G
Sbjct: 558 VILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGR 617
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVE 528
+ +AE +R++M++++V K+PG S +E
Sbjct: 618 YEDAEKVRQVMEKRDVVKEPGQSWIE 643
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 225/443 (50%), Gaps = 44/443 (9%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G +EA+G + M R F +L+ C L +++G++VHA + G + + +
Sbjct: 75 GRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLE 134
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N L+ MY+KCG L ARRVF G+ +R++VSWT+MI + ++ EA +E MKL G +
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCK 194
Query: 212 PNQFTY-----------------------------------NAIIASYARRGDSNAAFAF 236
P++ T+ +++ YA+ GD + A
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVI 254
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F ++ + ++VTW +I+G+AQ + + AL+L + M + + PN +T T +LQ
Sbjct: 255 FDKLPEK----NVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTT 310
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+++ G+++H + + G +++ +ALI MY KCG LK+AR LF ++V +W AM
Sbjct: 311 PLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAM 370
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
+ Y + G D +I+LF RM ++G++ +++T S L++CS +++G I + + G
Sbjct: 371 VTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHA-G 429
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA-GAFRNGCNIHGRRDLAVTM 475
+ + +V M + G M +A + Q M N +A A GC HGR A+
Sbjct: 430 YSLDVYLQSALVSMYAKCGSMDDARLVFNQ--MSERNVVAWTAMITGCAQHGRCREALEY 487
Query: 476 GEEFFEMGLRKPDGFVMLSNICA 498
E+ + G+ KPD S + A
Sbjct: 488 FEQMKKQGI-KPDKVTFTSVLSA 509
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 103/193 (53%), Gaps = 1/193 (0%)
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+S + R EAL + M++ G + + G+LQ S++ GRE+HA + + G+
Sbjct: 68 VSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 127
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+ + + L+ MY+KCGSL DAR +F+ R +N+ SW AMI + + + +E
Sbjct: 128 QPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYET 187
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M G + ++VT +S+L+A ++ L++ G ++ + + G+++ +V M + G
Sbjct: 188 MKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIA-KAGLELEPRVGTSLVGMYAKCG 246
Query: 436 RMVEAYDLLRQVP 448
+ +A + ++P
Sbjct: 247 DISKAQVIFDKLP 259
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/513 (34%), Positives = 284/513 (55%), Gaps = 8/513 (1%)
Query: 28 ALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
AL +GKQ HA+ N L++ + L S ++ Y+ G + A LVF ++ +V + W ++
Sbjct: 1393 ALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDV--VTWNLL 1450
Query: 87 ASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
S++ + Q +A+ LMR R + T S +L A +IK GK+ H +
Sbjct: 1451 ISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNL 1510
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
E+DV V N++IDMY+KC + AR+VF ERD+V W ++++ Y V EA+ LF +
Sbjct: 1511 ESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQ 1570
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M+ + + PN ++N++I + R G N A FS+M + GF P+L+TW +ISG AQS
Sbjct: 1571 MQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGF 1630
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
EA+ F+ M +GI+P+ ++T VL A S+ GR IH + R + V ++
Sbjct: 1631 GYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATS 1690
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+DMY+KCGS+ +A+ +F + K + +NAMI Y HG ++ LF+ + +EG+ +
Sbjct: 1691 LVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPD 1750
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
+T S+LSACSH GLV +GL +F M ++ + EHY CVV +L R G + EA L+
Sbjct: 1751 SITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLI 1810
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+P + G+ C H +L + + F++ +V LSN AA G W
Sbjct: 1811 LTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWV 1870
Query: 505 EAENLRKIMKEKNVQKQPGFSRVE---KRNEFV 534
E N+R +MK + ++K PG S ++ K N FV
Sbjct: 1871 EVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFV 1903
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 230/461 (49%), Gaps = 45/461 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIP 74
LL C+ +AL G+Q+HA + N + F+ +++KLV YA C A +F ++
Sbjct: 1180 LLQGCVYERALHTGQQIHARILKNG-DFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLR 1238
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NVF +V G ++A+ F M+E + F VLKAC L I GK
Sbjct: 1239 VRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKG 1298
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH +MGF V V ++L+DMY KCG+L AR+VF M E++VV+W SMI GY
Sbjct: 1299 VHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGL 1358
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
EA+ +F M++EG+EP + T ++
Sbjct: 1359 NQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSS 1418
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
II Y++ G A FSRM + D+VTWN +IS + Q + +AL + M
Sbjct: 1419 IINFYSKVGLIEDAELVFSRMLEK----DVVTWNLLISSYVQHHQVGKALNMCHLMRSEN 1474
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
++ ++VT++ +L A +T +I++G+E H R L DV +++IDMY+KC + DAR
Sbjct: 1475 LRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDAR 1534
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ T +++ WN ++ Y + G+ +++LF +M + + N ++ SV+ G
Sbjct: 1535 KVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNG 1594
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
V + ++F M + G + + + ++ L +SG EA
Sbjct: 1595 QVNEAKDMFSQM-QSLGFQPNLITWTTLISGLAQSGFGYEA 1634
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 189/413 (45%), Gaps = 55/413 (13%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG--FENDVS 149
G+ QE++ S M ++ + +L+ CV + G+Q+HA + G F +
Sbjct: 1153 GHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEY 1212
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
V L+ Y+KC A R+FH + R+V SW +++ C + ++A++ F M+ G
Sbjct: 1213 VETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENG 1272
Query: 210 LEPNQFTY-----------------------------------NAIIASYARRGDSNAAF 234
+ P+ F ++++ Y + G A
Sbjct: 1273 VFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDAR 1332
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F M + ++VTWN+MI G+ Q+ EA+ +F M V GI+P VTV L A
Sbjct: 1333 KVFDSMVEK----NVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSAS 1388
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
++ G++ HA+ L +D GS++I+ YSK G ++DA +F K+V +WN
Sbjct: 1389 ANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWN 1448
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE-----IFR 409
+I Y +H V ++ + M E +R + VTL S+LSA + ++ G E I R
Sbjct: 1449 LLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRR 1508
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
+++ V S ++DM + R+ +A +D + + + N++ A+
Sbjct: 1509 NLESDVVVANS------IIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAY 1555
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 300/578 (51%), Gaps = 41/578 (7%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAG 59
MNRL + S Y++ +L +C+K K L KQVH + + + + + + L+ VY
Sbjct: 17 MNRLQRGLITDSFMYVE-VLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIE 75
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
CG + AR VFD + + N M+ + ++A+ F M + N T+ I+
Sbjct: 76 CGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMII 135
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
LKAC L +K GK+VHA G E+DV VG AL+ MY KCG + ARR+F + D+
Sbjct: 136 LKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDI 195
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------------- 217
+SWT MI Y EA L +M+ EG +PN TY
Sbjct: 196 ISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRH 255
Query: 218 -------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
A++ YA+ G + A F RM V D+V+WN MI FA+ R
Sbjct: 256 ALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMK----VRDVVSWNVMIGAFAEHGR 311
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+EA LF M G KP+ + +L A G+++ ++IH GL +DV G+A
Sbjct: 312 GHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTA 371
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+ MYSK GS+ DAR +F+ +++NV SWNAMI +HG+ ++E+F RM G++ +
Sbjct: 372 LVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPD 431
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
VT ++VLSACSH GLV++G + +M + YG++ H C+VD+L R+GR++EA +
Sbjct: 432 RVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFI 491
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+ + + GA C +G +L + +E ++ + +V+LSNI A G+W
Sbjct: 492 DNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWD 551
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
+R +M+E+ ++K+PG S +E N+ + V + S
Sbjct: 552 MVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSS 589
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 113/241 (46%), Gaps = 11/241 (4%)
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
+EA+ + L G+ ++ VL+ + +++H + + + + + L
Sbjct: 10 SEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNL 69
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
+ +Y +CG L++AR +F+ K+ ASWNAMI Y +H + ++ LF M EG++ N
Sbjct: 70 LHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNA 129
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YD 442
T + +L AC+ ++ G E+ ++ G++ ++ M + G + EA +D
Sbjct: 130 GTYMIILKACASLSALKWGKEVHACIRHG-GLESDVRVGTALLRMYGKCGSINEARRIFD 188
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNICAAD 500
L + M GA+ N L + M +E F KP+ +V + N CA++
Sbjct: 189 NLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGF-----KPNAITYVSILNACASE 243
Query: 501 G 501
G
Sbjct: 244 G 244
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 290/555 (52%), Gaps = 48/555 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL +C +K+L +Q+H + N ++ + L+ + D N+A L+F +IP PN
Sbjct: 37 LLKQCTSTKSL---QQIHTQMIINAIHKPNF---LLHRFIDLKDFNNASLLFSQIPYPNE 90
Query: 79 FMLNWMVMASAFTGN-FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ N M+ T F I ++ M++F R N FT+ V AC LL + G+ H+
Sbjct: 91 YAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHS 150
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ G D V ++LI MYS+CG L ARRVF + E+D+VSW SMISGY + +
Sbjct: 151 GVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGD 210
Query: 198 AVVLFERMKLEGLEP-----------------------------------NQFTYNAIIA 222
AV LF M+ G EP N F +A+I
Sbjct: 211 AVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIG 270
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y + GD ++A F RM + D+VTWNAMI+G+AQ+ +EA+ LF GM SG+ P
Sbjct: 271 MYGKCGDLSSARRVFDRMVKK----DVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNP 326
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ +T+ GVL A G++ G+ + GL D++ +ALIDMY+KCGSL DA +F
Sbjct: 327 DKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVF 386
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG--MRANEVTLISVLSACSHGGL 400
E KN SWNAMI HG S+ LF+RM +EG +R N+++ I VLSAC H GL
Sbjct: 387 EDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGL 446
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V++G ++F M +G+ EH++C+VD+L R+G + EA+D + ++P + GA
Sbjct: 447 VDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALL 506
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
C D++ + EM +++ S I A W ++ +R +M+++ V K
Sbjct: 507 GACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTK 566
Query: 521 QPGFSRVEKRNEFVE 535
PG S +E N+ E
Sbjct: 567 TPGCSWIEIENQVHE 581
>gi|449450760|ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
gi|449496662|ref|XP_004160192.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
Length = 547
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 297/514 (57%), Gaps = 6/514 (1%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ C +++ L G+ +HA L+ + +K + YA CG + AR++FDKIP N
Sbjct: 34 LIETCGRNRDLNFGRSLHARLIIDGSARLTHFAAKFIAFYAACGKIKDARILFDKIPRTN 93
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
W+V+ A++ G + EA+ F ++ R +++ VLKAC L + G+++
Sbjct: 94 P--RRWIVLIGAYSRCGYYPEALSVFCELQRGGLRPSEYIIPSVLKACGHLSEKTTGRKL 151
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + + E+D V +ALIDMY+K G + ARRVF M +D+V+ +M+SGY +
Sbjct: 152 HTLILKNSLESDAYVCSALIDMYAKSGEVEKARRVFESMAGKDLVALNAMVSGYAHHGLA 211
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
+EA+ L E M++ G++PN T+N ++ +++ G+ F M A G PD+V+W ++
Sbjct: 212 EEALNLVEEMQVLGIKPNLVTWNTLVTGFSQIGEEEMVRELFKEMEANGIEPDVVSWTSV 271
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
ISGF Q+ R EA F+ ML +G P + T++ +L A G+ + G+EIH +G+
Sbjct: 272 ISGFVQNFRNEEAFDTFRRMLNAGFHPTSATISSLLPACASVGNGRCGKEIHGHSLALGV 331
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
DV+ +AL+DMY+KCG +A+ LF +N A+WN+MI Y HG + +IELF +
Sbjct: 332 EKDVYVRTALVDMYAKCGYFYEAKILFWRMSERNSATWNSMIFGYANHGYCNEAIELFHQ 391
Query: 376 MLEEGMRA-NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
M ++ + + +T ++L+AC+H GLV+ G +F+ M+ +YG+ EHYAC+VD+ R+
Sbjct: 392 MKDDDEKKLDHLTFTAILTACAHAGLVDLGRSLFQLMQSKYGIVPRVEHYACMVDVFGRA 451
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
G++ EAYDL++ +P+ + GA C HG +LA + E+ ++LS
Sbjct: 452 GKLAEAYDLIKTMPVKPDLYVWGALLGACRKHGEIELAEEAAKHLSELEPGSVGNSLLLS 511
Query: 495 NICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+I A G W L+K+MK++ ++K PG S +E
Sbjct: 512 DIYANAGSWGHVVKLKKMMKKRKMKKFPGCSWIE 545
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 191/547 (34%), Positives = 300/547 (54%), Gaps = 34/547 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C + LR+GK++H L N N+F++ + +V +YA C V A +FD++P
Sbjct: 181 LLKVCGDNADLRKGKEIHCQLIVNGFASNVFAM-TGVVNMYAKCRLVEEAYKMFDRMPER 239
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N ++ A G + A+ M+E R + T +L A + ++ G+ +H
Sbjct: 240 DLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIH 299
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ + GFE+ V+V AL+DMYSKCG + +AR +F M + VVSW SMI GY
Sbjct: 300 GYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPG 359
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS----------------------NAAF 234
A+ +F++M E +E T + + A GD N+
Sbjct: 360 AAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLI 419
Query: 235 AFFSR-----MTAEGFV----PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ +S+ + AE F LV+WNAMI G+AQ+ R NEA+ F M + IKP++
Sbjct: 420 SMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSF 479
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T+ V+ A + + IH LV R L +VF +AL+DMY+KCG++ AR LF++
Sbjct: 480 TMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMM 539
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
++V +WNAMI YG HG+ +++ELFE+M +E ++ NEVT + VLSACSH GLVE+G
Sbjct: 540 DERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGF 599
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
+ F SMK+ YG++ + +HY +VD+L R+ R+ EA+D ++++P+ S+ GA C I
Sbjct: 600 QYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRI 659
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
H +L F++ V+L+NI A W + +R M++K +QK PG+S
Sbjct: 660 HKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWS 719
Query: 526 RVEKRNE 532
VE +NE
Sbjct: 720 VVELQNE 726
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 239/504 (47%), Gaps = 61/504 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C K L Q L+ N L L ++KLV ++ G ++ A VF I +
Sbjct: 83 LLELCTSMKELHQ---FIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKI 139
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ + M+ A + +A+ +F MR R + F+ +LK C D++KGK++H
Sbjct: 140 DELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHC 199
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
GF ++V +++MY+KC L+ A ++F M ERD+V W ++ISGY
Sbjct: 200 QLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKT 259
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIAS---------------------------------- 223
A+ L RM+ EG P+ T +I+ +
Sbjct: 260 ALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVD 319
Query: 224 -YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y++ G A F RMT + +V+WN+MI G+ Q+ A+++F+ M+ ++
Sbjct: 320 MYSKCGSVGTARLIFDRMTGK----TVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEM 375
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
NVTV G L A G ++ GR +H L+ ++ L DV ++LI MYSKC + A +F
Sbjct: 376 TNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIF 435
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E + K + SWNAMI Y ++G ++ +I+ F +M + ++ + T++SV+ A + ++
Sbjct: 436 ENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLP 495
Query: 403 K-----GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNS 454
+ GL I + + V + +VDM + G + A +D++ + + N+
Sbjct: 496 QAKWIHGLVIRTCLDKNVFVATA------LVDMYAKCGAVHTARKLFDMMDERHVTTWNA 549
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEE 478
M +G HG A+ + E+
Sbjct: 550 MI----DGYGTHGLGKAALELFEK 569
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 185/513 (36%), Positives = 294/513 (57%), Gaps = 17/513 (3%)
Query: 25 KSKALRQGKQVHALLCTNDL--NIFSLKSKL-VGVYAGCGDVNSARLVFDKIPNPNVFML 81
+ ++LRQ KQVHAL+ + +L+ L A G + A LVFD+IP P++FM
Sbjct: 17 RCRSLRQIKQVHALMVLRGFLSDPSALRELLFASAVAVRGAIAHAYLVFDQIPRPDLFMY 76
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFI----YRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
N ++ +A T ++A+ ++ M R +K TF VL+AC + G QVHA
Sbjct: 77 NTLIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGAGGTGAQVHA 136
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ G E+D V NALI M++ CG L A +F G D V+W++MI+G +
Sbjct: 137 HVVKAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDAVAWSAMITGCARRGDIVA 196
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
A LF+ ++ + ++N +I +YA+RG+ A F+R+ D+V+WNAMIS
Sbjct: 197 ARKLFDECPVK----DHVSWNVMITAYAKRGEMAPARVLFNRIPER----DVVSWNAMIS 248
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH- 316
G + A++LF+ M G KP+ VT+ +L A +G I +GR +H+ + M L
Sbjct: 249 GHVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACADSGDIDVGRRLHSSLSEMFLRT 308
Query: 317 -IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
V G+ALIDMY+KCGS+K A +F + R K+V++WN++IG HG V SI++F++
Sbjct: 309 GFTVILGNALIDMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGHVLESIDVFKK 368
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
ML+E +R +E+T ++VL ACSHGG+V+KG E F M+ Y ++ + +HY C+VDML R+G
Sbjct: 369 MLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYGCMVDMLGRAG 428
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
+ EA++ + + + + + C +HG +LA + + + +V+LSN
Sbjct: 429 LLKEAFEFIDTMKVEPNSVIWRTLLGACRVHGEIELAEHANRQLLKARNDESGDYVLLSN 488
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
I A+ GEW E+E +RK+M + V KQ G + V+
Sbjct: 489 IYASAGEWSESEKMRKLMDDSGVNKQAGRTVVD 521
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 284/514 (55%), Gaps = 8/514 (1%)
Query: 19 LLGKCMKS-KALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LLG+ + + +R + VH+ + DL SL KL+ YA DV SAR VFD+IP
Sbjct: 44 LLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPER 103
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV ++N M+ + G + E + F M R + +TF VLKAC I G+++H
Sbjct: 104 NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIH 163
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
AT++G + + VGN L+ MY KCG L AR V M RDVVSW S++ GY + D
Sbjct: 164 GSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFD 223
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA--FFSRMTAEGFVPDLVTWNA 254
+A+ + M+ + + T +++ + + N + F +M + LV+WN
Sbjct: 224 DALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKS----LVSWNV 279
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MI + ++ EA++L+ M G +P+ V++T VL A G T ++ +G++IH + R
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L ++ +ALIDMY+KCG L+ AR +FE + ++V SW AMI YG G ++ LF
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
++ + G+ + + ++ L+ACSH GL+E+G F+ M + Y + EH AC+VD+L R+
Sbjct: 400 KLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 459
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
G++ EAY ++ + M + GA C +H D+ + ++ F++ + +V+LS
Sbjct: 460 GKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLS 519
Query: 495 NICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
NI A G W E N+R IMK K ++K PG S VE
Sbjct: 520 NIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVE 553
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 187/567 (32%), Positives = 306/567 (53%), Gaps = 45/567 (7%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAG 59
MN +I + + LL +C + ++L QG++VHA + + + L++ L+ +YA
Sbjct: 35 MNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAK 94
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFS 117
CG + AR VFD I + N+ ++W M AF + EA + M+ + +K TF
Sbjct: 95 CGSLTDARRVFDSIRDRNI--VSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFV 152
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
+L A ++ G++VH + G E + VG +L+ MY+KCG + AR +F + E+
Sbjct: 153 SLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEK 212
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------- 217
+VV+WT +I+GY +VD A+ L E M+ + PN+ T+
Sbjct: 213 NVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVH 272
Query: 218 ---------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
N++I Y + G A FS + D+VTW AM++G+AQ
Sbjct: 273 RYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHR----DVVTWTAMVTGYAQL 328
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
+EA+ LF+ M GIKP+ +T T VL + +Q G+ IH + G ++DV+
Sbjct: 329 GFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQ 388
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI-GCYGKHGMVDSSIELFERMLEEGM 381
SAL+ MY+KCGS+ DA +F +NV +W A+I GC +HG ++E F++M ++G+
Sbjct: 389 SALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGI 448
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
+ ++VT SVLSAC+H GLVE+G + FRSM YG+K EHY+C VD+L R+G + EA
Sbjct: 449 KPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAE 508
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
+++ +P S+ GA + C +H + E ++ +V LS+I AA G
Sbjct: 509 NVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAG 568
Query: 502 EWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ +AE +R++M++++V K+PG S +E
Sbjct: 569 RYEDAEKVRQVMEKRDVVKEPGQSWIE 595
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 104/193 (53%), Gaps = 1/193 (0%)
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+S ++ R EAL + M++ G + + G+LQ S++ GRE+HA + + G+
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+ + + L+ MY+KCGSL DAR +F+ R +N+ SW AMI + + + +E
Sbjct: 79 QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M G + ++VT +S+L+A ++ L++ G ++ + E G+++ +V M + G
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEA-GLELEPRVGTSLVGMYAKCG 197
Query: 436 RMVEAYDLLRQVP 448
+ +A + ++P
Sbjct: 198 DISKARVIFDRLP 210
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 181/552 (32%), Positives = 293/552 (53%), Gaps = 40/552 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
+ LL C L++G Q+H+ L ++ + ++ L+ +Y CGDV +A ++F+
Sbjct: 247 ISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD 306
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NV + N M++A + ++ F M+ R N+FT+ +L+ C +I G+Q
Sbjct: 307 RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ 366
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H+++ + GFE+D+ V LIDMYSK G L ARRV + E+DVVSWTSMI+GY
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426
Query: 195 VDEAVVLFERMKLEGLEPNQF-----------------------------------TYNA 219
+A+ F+ M+ G+ P+ +NA
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNA 486
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YAR G AF+ F M + D +T N ++SGFAQS EALK+F M SG
Sbjct: 487 LVNLYARCGRIREAFSSFEEME----LKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+K N T L A I+ G++IHA V + G + G+ALI +Y KCGS +DA+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
F +N SWN +I +HG +++LF++M +EG++ N+VT I VL+ACSH G
Sbjct: 603 MEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVE+GL F+SM + YG++ +HYACV+D+ R+G++ A + ++P+ +
Sbjct: 663 LVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTL 722
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ C +H ++ + E+ +V+LSN A +W + +RK+M+++ V+
Sbjct: 723 LSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVR 782
Query: 520 KQPGFSRVEKRN 531
K+PG S +E +N
Sbjct: 783 KEPGRSWIEVKN 794
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 215/451 (47%), Gaps = 39/451 (8%)
Query: 34 QVHALLCTNDLNIFSLKSKL-VGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTG 92
++HA T L + + L + +Y+ G V AR VF+++ + ++W+ M S +
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARD--NVSWVAMLSGYAQ 120
Query: 93 NF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
N +EA+G + M + S VL +C +G+ +HA + GF +++ V
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
GNA+I +Y +CG A RVF M RD V++ ++ISG+ + A+ +FE M+ GL
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD---------------------- 248
P+ T ++++A+ A GD S + G D
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300
Query: 249 ---------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
+V WN M+ F Q ++ +LF M +GI+PN T +L+ T
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
I +G +IH+L + G D++ LIDMYSK G L+ AR + E+ + K+V SW +MI
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVK 418
Y +H ++ F+ M + G+ + + L S +S C+ + +GL+I R Y
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGD 480
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
+S + +V++ R GR+ EA+ ++ +
Sbjct: 481 VSI--WNALVNLYARCGRIREAFSSFEEMEL 509
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 211/428 (49%), Gaps = 40/428 (9%)
Query: 16 LDCLLGKCMKSKALRQGKQVHAL-----LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
L +L C K++ QG+ +HA C+ IF + + ++ +Y CG A VF
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCS---EIF-VGNAVITLYLRCGSFRLAERVF 201
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+P+ + N ++ A G+ + A+ F M+ + T S +L AC L D++
Sbjct: 202 CDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQ 261
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
KG Q+H+ + G +D + +L+D+Y KCG + +A +F+ +VV W M+ +
Sbjct: 262 KGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFG 321
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAII--ASYARRGDSNAAF-------AFFSRMT 241
++ + ++ LF +M+ G+ PNQFTY I+ + R D F S M
Sbjct: 322 QINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMY 381
Query: 242 AEGFV----------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
G + D+V+W +MI+G+ Q + +AL FK M G
Sbjct: 382 VSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG 441
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I P+N+ + + +++ G +IHA + G DV +AL+++Y++CG +++A
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+ FE +K+ + N ++ + + G+ + ++++F RM + G++ N T +S LSA ++
Sbjct: 502 SSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561
Query: 400 LVEKGLEI 407
+++G +I
Sbjct: 562 EIKQGKQI 569
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 182/393 (46%), Gaps = 55/393 (13%)
Query: 116 FSIVLKACVGLLDIKKGK------QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
F+ L+AC G G+ ++HA A G VGN LID+YSK GL+ ARR
Sbjct: 44 FACALRACRG-----NGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARR 98
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ--------------- 214
VF + RD VSW +M+SGY +EA+ L+ +M G+ P
Sbjct: 99 VFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAEL 158
Query: 215 --------------------FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
F NA+I Y R G A F M D VT+N
Sbjct: 159 FAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR----DTVTFNT 214
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
+ISG AQ AL++F+ M SG+ P+ VT++ +L A G +Q G ++H+ + + G
Sbjct: 215 LISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAG 274
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+ D +L+D+Y KCG ++ A +F + NV WN M+ +G+ + S ELF
Sbjct: 275 ISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFC 334
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
+M G+R N+ T +L C+ ++ G +I S+ + G + ++DM +
Sbjct: 335 QMQAAGIRPNQFTYPCILRTCTCTREIDLGEQI-HSLSVKTGFESDMYVSGVLIDMYSKY 393
Query: 435 GRMVEAYDLLRQVP----MYVTNSMAGAFRNGC 463
G + +A +L + + T+ +AG ++ C
Sbjct: 394 GWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 284/514 (55%), Gaps = 8/514 (1%)
Query: 19 LLGKCMKS-KALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LLG+ + + +R + VH+ + DL SL KL+ YA DV SAR VFD+IP
Sbjct: 44 LLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPER 103
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV ++N M+ + G + E + F M R + +TF VLKAC I G+++H
Sbjct: 104 NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIH 163
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
AT++G + + VGN L+ MY KCG L AR V M RDVVSW S++ GY + D
Sbjct: 164 GSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFD 223
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA--FFSRMTAEGFVPDLVTWNA 254
+A+ + M+ + + T +++ + + N + F +M + LV+WN
Sbjct: 224 DALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKS----LVSWNV 279
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MI + ++ EA++L+ M G +P+ V++T VL A G T ++ +G++IH + R
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L ++ +ALIDMY+KCG L+ AR +FE + ++V SW AMI YG G ++ LF
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
++ + G+ + + ++ L+ACSH GL+E+G F+ M + Y + EH AC+VD+L R+
Sbjct: 400 KLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 459
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
G++ EAY ++ + M + GA C +H D+ + ++ F++ + +V+LS
Sbjct: 460 GKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLS 519
Query: 495 NICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
NI A G W E N+R IMK K ++K PG S VE
Sbjct: 520 NIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVE 553
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 183/520 (35%), Positives = 294/520 (56%), Gaps = 15/520 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYA--GCGDVNSARLVFDKIPN 75
L KC ++L KQ+HA L N LN S+ +L+ V A G ++ A +F +I
Sbjct: 19 LWQKCTNFRSL---KQLHAFLIVNGLNSTTSVLRELIFVSAIVVSGTMDYAHQLFAQISQ 75
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
P++FM N M+ SA T A+ ++ M R +KFTFS VLKAC L +K G +
Sbjct: 76 PDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGI 135
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + GF+++ V N LI ++ CG L +AR +F +R+VV W+++ +GY K+
Sbjct: 136 HGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKL 195
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
D A LF+ M ++ L ++N +I +YA+ G+ A F + + D+VTWNAM
Sbjct: 196 DVARQLFDEMPMKDL----VSWNVMITAYAKHGEMEKARKLFDEVPKK----DVVTWNAM 247
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
I+G+ S+ EAL++F M G +P++VT+ +L A G ++IG++IH + M
Sbjct: 248 IAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCC 307
Query: 316 -HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+ V +ALIDMY+KCGS+ +A +F+ R K+ +SWN++IG HG + SI LF+
Sbjct: 308 GDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQ 367
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
ML M+ NE+T ++VL ACSH G V +G F MK + ++ + +HY C+VD+L R+
Sbjct: 368 EMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRA 427
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
G ++EA+D + + + + C +HG +L E+ +M + +V+LS
Sbjct: 428 GLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLS 487
Query: 495 NICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFV 534
NI A+ GEW + +RK+M + V+K+ G S ++ N F+
Sbjct: 488 NIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSDNSFL 527
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 190/547 (34%), Positives = 295/547 (53%), Gaps = 34/547 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C + L++GK++H + T+ N+F++ + +V +YA C +N A +FD++P
Sbjct: 36 LLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAM-TGVVNMYAKCRQINDAYNMFDRMPER 94
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N M+ A G + A+ M E +R + T +L A ++ G VH
Sbjct: 95 DLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVH 154
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ GFE+ V+V AL+DMYSKCG + AR +F GM R VVSW SMI GY +
Sbjct: 155 GYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAE 214
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------SNAAF 234
A+++F++M EG++P T + + A GD N+
Sbjct: 215 GAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLI 274
Query: 235 AFFSRMTAEGFVPD---------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ +S+ D LV+WNAMI G+AQ+ NEAL F M IKP++
Sbjct: 275 SMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSF 334
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T+ V+ A + + IH LV R L +VF +AL+DMY+KCG++ AR LF++
Sbjct: 335 TMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMM 394
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
++V +WNAMI YG HG+ +S+ELF+ M + ++ N++T + LSACSH GLVE+GL
Sbjct: 395 NARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGL 454
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
F SMK+ YG++ + +HY +VD+L R+GR+ +A+D ++++P+ ++ GA C I
Sbjct: 455 CFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKI 514
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
H DL E F++ V+L+NI A W + +R IM++ +QK PG S
Sbjct: 515 HKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCS 574
Query: 526 RVEKRNE 532
VE NE
Sbjct: 575 LVEIGNE 581
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 210/461 (45%), Gaps = 64/461 (13%)
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
M+ A + + A+ +FS M+ R + F+ +LK C D+K+GK++H G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
F ++ +++MY+KC + A +F M ERD+V W +MISGY A++L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 204 RMKLEGLEPNQFTY-----------------------------------NAIIASYARRG 228
RM EG P+ T A++ Y++ G
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
+ A F M +V+WN+MI G+ QS A+ +F+ ML G++P NVTV
Sbjct: 181 SVSIARVIFDGMDHR----TVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVM 236
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
G L A G ++ G+ +H LV ++ L DV ++LI MYSKC + A +F+ R K
Sbjct: 237 GALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNK 296
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+ SWNAMI Y ++G V+ ++ F M ++ + T++SV+ A + L I
Sbjct: 297 TLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAE-------LSIP 349
Query: 409 RSMKERYGVKISKEH------YACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
R K +G+ I + +VDM + G + A +D++ + N+M
Sbjct: 350 RQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMI--- 406
Query: 460 RNGCNIHGRRDLAVTMGEEFFEM--GLRKPDGFVMLSNICA 498
+G HG L T E F EM G KP+ L + A
Sbjct: 407 -DGYGTHG---LGKTSVELFKEMKKGTIKPNDITFLCALSA 443
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 194/571 (33%), Positives = 300/571 (52%), Gaps = 67/571 (11%)
Query: 17 DCLLGKCMKSKALRQGKQVHALLCTNDLNI--FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
D LL C+ +K+L K +HA + SL +KLV +Y G + AR VFD++P
Sbjct: 68 DSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMP 127
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NV M+ A A + QEA+G+F M++ + N FTF+ +L AC D++ +
Sbjct: 128 VKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACT---DLEVLGE 184
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H + GFE++V VGN L+DMY+K G + AR +F M +RDVVSW +MI+GY
Sbjct: 185 FHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGL 244
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP------- 247
+++A+ LF+ + + + T+N ++A YA+ GD A F +M + V
Sbjct: 245 IEDALKLFQEIP----KRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAG 300
Query: 248 --------------------DLVTWNAMISGFAQSKRENEALKLFKGM----------LV 277
++++WNA+ISGFAQ+ + EALKLFK M ++
Sbjct: 301 YVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMI 360
Query: 278 SG---------------------IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+G +KPN T VL A ++ G E H +V R G
Sbjct: 361 AGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQ 420
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
DV G+ L+ MY+KCGS++DAR +F+ R ++ AS +AMI Y +G S+ELFE+M
Sbjct: 421 SDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQM 480
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
G++ + VT + VLSAC H GLV++G + F M Y + + EHY C++D+L R+G
Sbjct: 481 QFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGC 540
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
EA DL+ ++P+ M G+ + C H DL + + + + P +V+LSNI
Sbjct: 541 FDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNI 600
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
AA G W + ++R MK++ V+K+ G S +
Sbjct: 601 YAAAGRWDDIGSVRNRMKDRKVKKKLGCSWI 631
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 180/370 (48%), Gaps = 50/370 (13%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE-NDVSV 150
G +EA+ M E + T+ +L+ C+ + K +HA Q FE D+S+
Sbjct: 43 GRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISL 102
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
GN L+ +Y K G L ARRVF M ++VVSWT+MI+ Y EA+ F M+ G+
Sbjct: 103 GNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGI 162
Query: 211 EPNQFTY--------------------------------NAIIASYARRGDSNAAFAFFS 238
+PN FT+ N ++ YA+RG A F
Sbjct: 163 QPNHFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFD 222
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
+M D+V+WNAMI+G+ Q+ +ALKLF+ + + N + G Q G +
Sbjct: 223 KMPQR----DVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVEN 278
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++++ ++ ++ + + +I Y + GS+K+A LF+I +NV SWNA+I
Sbjct: 279 AVELFEKMP--------EQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVIS 330
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
+ ++G V+ +++LF+ M E N V+ ++++ S G E L++F M + +K
Sbjct: 331 GFAQNGQVEEALKLFKTMPE----CNVVSWNAMIAGYSQNGQAENALKLFGQM-QMVDMK 385
Query: 419 ISKEHYACVV 428
+ E +A V+
Sbjct: 386 PNTETFAIVL 395
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 129/302 (42%), Gaps = 48/302 (15%)
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
+ ++ + R EAL + + M+ +GI P++ T +LQ S+ + +HA + +
Sbjct: 33 DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92
Query: 313 MGLHI-DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
D+ G+ L+ +Y K GSL +AR +F+ +KNV SW AMI Y +H ++
Sbjct: 93 TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALG 152
Query: 372 LFERMLEEGMRANEVTLISVLSACS--------HGGLVEKGL------------------ 405
F M + G++ N T S+L AC+ H +V+ G
Sbjct: 153 FFYEMQDVGIQPNHFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRG 212
Query: 406 ------EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMA 456
E+F M +R V + ++ ++G + +A L +++P + N+M
Sbjct: 213 CIEFARELFDKMPQRDVVS-----WNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMM 267
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
+ ++ +L M E+ G+V +G EA L +IM E+
Sbjct: 268 AGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQ-------NGSVKEAFKLFQIMPER 320
Query: 517 NV 518
NV
Sbjct: 321 NV 322
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 291/549 (53%), Gaps = 47/549 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C +AL QGK+VHA + D I+ + + ++ +Y CG + A VFD +
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIY-VGTAILSMYTKCGSMEDALEVFDLVKGR 376
Query: 77 NVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NV ++W M + F G EA +F+ M E N+ TF +L AC +K+G+Q
Sbjct: 377 NV--VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQ 434
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+ + G+ +D V AL+ MY+KCG L A RVF + +++VV+W +MI+ Y +
Sbjct: 435 IQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQ 494
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
D A+ F+ + EG++PN T+ NA
Sbjct: 495 YDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNA 554
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+++ + GD +A F+ M DLV+WN +I+GF Q + A FK M SG
Sbjct: 555 LVSMFVNCGDLMSAKNLFNDMPKR----DLVSWNTIIAGFVQHGKNQVAFDYFKMMQESG 610
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
IKP+ +T TG+L A ++ GR +HAL+ DV G+ LI MY+KCGS++DA
Sbjct: 611 IKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAH 670
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F KNV SW +MI Y +HG ++ELF +M +EG++ + +T + LSAC+H G
Sbjct: 671 QVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAG 730
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
L+E+GL F+SMKE + ++ EHY C+VD+ R+G + EA + + ++ + + + GA
Sbjct: 731 LIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGAL 789
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C +H +LA ++ E+ FV+LSNI AA G W E +RK+M ++ V
Sbjct: 790 LGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVV 849
Query: 520 KQPGFSRVE 528
K+PG S +E
Sbjct: 850 KKPGQSWIE 858
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 148/552 (26%), Positives = 278/552 (50%), Gaps = 67/552 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C ++ + +G++++ L+ D ++F + + L+ ++ CGD+ A VFD +P
Sbjct: 217 MLNACADARNVDKGRELYNLILKAGWDTDLF-VGTALINMHIKCGDIGDATKVFDNLPTR 275
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ M+ A G F++A F M E + +K F +L+AC +++GK+VH
Sbjct: 276 DLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVH 335
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A ++G++ ++ VG A++ MY+KCG + A VF + R+VVSWT+MI+G+ ++D
Sbjct: 336 ARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRID 395
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
EA + F +M G+EPN+ T+ A++
Sbjct: 396 EAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALL 455
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ YA+ G A F +++ + ++V WNAMI+ + Q ++ + AL F+ +L GIK
Sbjct: 456 SMYAKCGSLKDAHRVFEKISKQ----NVVAWNAMITAYVQHEQYDNALATFQALLKEGIK 511
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN+ T T +L + S+++G+ +H L+ + GL D+ +AL+ M+ CG L A+ L
Sbjct: 512 PNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNL 571
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F +++ SWN +I + +HG + + F+ M E G++ +++T +L+AC+ +
Sbjct: 572 FNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEAL 631
Query: 402 EKGLEIFRSMKERYGVKISKEHYAC-------VVDMLCRSGRMVEAYDLLRQVP---MYV 451
+G R I++ + C ++ M + G + +A+ + ++P +Y
Sbjct: 632 TEG--------RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYS 683
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENL 509
SM + HGR A+ + + + G+ KPD FV + CA G E +
Sbjct: 684 WTSMIAGYAQ----HGRGKEALELFYQMQQEGV-KPDWITFVGALSACAHAGLIEEGLHH 738
Query: 510 RKIMKEKNVQKQ 521
+ MKE N++ +
Sbjct: 739 FQSMKEFNIEPR 750
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/540 (29%), Positives = 269/540 (49%), Gaps = 55/540 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C+K K L G++++ + + + +IF +++ L+ +YA CG+ SA+ +FD +
Sbjct: 116 LLQLCIKFKNLGDGERIYNHIKKSGVQPDIF-MRNTLINMYAKCGNTISAKQIFDDMREK 174
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V+ N ++ G ++EA M + + +K TF +L AC ++ KG++++
Sbjct: 175 DVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELY 234
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ + G++ D+ VG ALI+M+ KCG + A +VF + RD+V+WTSMI+G +
Sbjct: 235 NLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFK 294
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
+A LF+RM+ EG++P++ + AI+
Sbjct: 295 QACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAIL 354
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ Y + G A F + ++V+W AMI+GFAQ R +EA F M+ SGI+
Sbjct: 355 SMYTKCGSMEDALEVFDLVKGR----NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE 410
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN VT +L A +++ G++I + G D +AL+ MY+KCGSLKDA +
Sbjct: 411 PNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRV 470
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
FE +NV +WNAMI Y +H D+++ F+ +L+EG++ N T S+L+ C +
Sbjct: 471 FEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSL 530
Query: 402 EKGLEI-FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAG 457
E G + F MK G++ +V M G ++ A +L +P + N++
Sbjct: 531 ELGKWVHFLIMKA--GLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIA 588
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKE 515
F HG+ +A + E G+ KPD F L N CA+ E L ++ E
Sbjct: 589 GFVQ----HGKNQVAFDYFKMMQESGI-KPDKITFTGLLNACASPEALTEGRRLHALITE 643
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 226/457 (49%), Gaps = 55/457 (12%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G F EA+ + + + T+S +L+ C+ ++ G++++ + G + D+ +
Sbjct: 89 GQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMR 148
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N LI+MY+KCG SA+++F M E+DV SW ++ GY +EA L E+M + ++
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVK 208
Query: 212 PNQFTY-----------------------------------NAIIASYARRGDSNAAFAF 236
P++ T+ A+I + + GD A
Sbjct: 209 PDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKV 268
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F + DLVTW +MI+G A+ R +A LF+ M G++P+ V +L+A
Sbjct: 269 FDNLPTR----DLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNH 324
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+++ G+++HA + +G +++ G+A++ MY+KCGS++DA +F++ + +NV SW AM
Sbjct: 325 PEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAM 384
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I + +HG +D + F +M+E G+ N VT +S+L ACS +++G +I + E G
Sbjct: 385 IAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEA-G 443
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAV 473
++ M + G + +A+ + ++ + N+M A+ H + D A+
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQ----HEQYDNAL 499
Query: 474 TMGEEFFEMGLRKPDG--FVMLSNICAAD-----GEW 503
+ + G+ KP+ F + N+C + G+W
Sbjct: 500 ATFQALLKEGI-KPNSSTFTSILNVCKSSDSLELGKW 535
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 144/276 (52%), Gaps = 13/276 (4%)
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
+ D NA+++ +++ + NEA+++ + + S I+ T + +LQ ++ G
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
I+ + + G+ D+F + LI+MY+KCG+ A+ +F+ R K+V SWN ++G Y +HG+
Sbjct: 132 IYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
+ + +L E+M+++ ++ ++ T +S+L+AC+ V+KG E++ ++ + G
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELY-NLILKAGWDTDLFVGT 250
Query: 426 CVVDMLCRSGRMVEAYDLLRQVP----MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFE 481
+++M + G + +A + +P + T+ + G R HGR A + + E
Sbjct: 251 ALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR-----HGRFKQACNLFQRMEE 305
Query: 482 MGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKE 515
G+ +PD FV L C + + + MKE
Sbjct: 306 EGV-QPDKVAFVSLLRACNHPEALEQGKKVHARMKE 340
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 291/549 (53%), Gaps = 47/549 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C +AL QGK+VHA + D I+ + + ++ +Y CG + A VFD +
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIY-VGTAILSMYTKCGSMEDALEVFDLVKGR 376
Query: 77 NVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NV ++W M + F G EA +F+ M E N+ TF +L AC +K+G+Q
Sbjct: 377 NV--VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQ 434
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+ + G+ +D V AL+ MY+KCG L A RVF + +++VV+W +MI+ Y +
Sbjct: 435 IQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQ 494
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
D A+ F+ + EG++PN T+ NA
Sbjct: 495 YDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNA 554
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+++ + GD +A F+ M DLV+WN +I+GF Q + A FK M SG
Sbjct: 555 LVSMFVNCGDLMSAKNLFNDMPKR----DLVSWNTIIAGFVQHGKNQVAFDYFKMMQESG 610
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
IKP+ +T TG+L A ++ GR +HAL+ DV G+ LI MY+KCGS++DA
Sbjct: 611 IKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAH 670
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F KNV SW +MI Y +HG ++ELF +M +EG++ + +T + LSAC+H G
Sbjct: 671 QVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAG 730
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
L+E+GL F+SMKE + ++ EHY C+VD+ R+G + EA + + ++ + + + GA
Sbjct: 731 LIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGAL 789
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C +H +LA ++ E+ FV+LSNI AA G W E +RK+M ++ V
Sbjct: 790 LGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVV 849
Query: 520 KQPGFSRVE 528
K+PG S +E
Sbjct: 850 KKPGQSWIE 858
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/552 (26%), Positives = 278/552 (50%), Gaps = 67/552 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C ++ + +G++++ L+ D ++F + + L+ ++ CGD+ A VFD +P
Sbjct: 217 MLNACADARNVDKGRELYNLILKAGWDTDLF-VGTALINMHIKCGDIGDATKVFDNLPTR 275
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ M+ A G F++A F M E + +K F +L+AC +++GK+VH
Sbjct: 276 DLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVH 335
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A ++G++ ++ VG A++ MY+KCG + A VF + R+VVSWT+MI+G+ ++D
Sbjct: 336 ARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRID 395
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
EA + F +M G+EPN+ T+ A++
Sbjct: 396 EAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALL 455
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ YA+ G A F +++ + ++V WNAMI+ + Q ++ + AL F+ +L GIK
Sbjct: 456 SMYAKCGSLKDAHRVFEKISKQ----NVVAWNAMITAYVQHEQYDNALATFQALLKEGIK 511
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN+ T T +L + S+++G+ +H L+ + GL D+ +AL+ M+ CG L A+ L
Sbjct: 512 PNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNL 571
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F +++ SWN +I + +HG + + F+ M E G++ +++T +L+AC+ +
Sbjct: 572 FNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEAL 631
Query: 402 EKGLEIFRSMKERYGVKISKEHYAC-------VVDMLCRSGRMVEAYDLLRQVP---MYV 451
+G R I++ + C ++ M + G + +A+ + ++P +Y
Sbjct: 632 TEG--------RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYS 683
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENL 509
SM + HGR A+ + + + G+ KPD FV + CA G E +
Sbjct: 684 WTSMITGYAQ----HGRGKEALELFYQMQQEGV-KPDWITFVGALSACAHAGLIEEGLHH 738
Query: 510 RKIMKEKNVQKQ 521
+ MKE N++ +
Sbjct: 739 FQSMKEFNIEPR 750
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 159/540 (29%), Positives = 268/540 (49%), Gaps = 55/540 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C+K K L G++++ + + + +IF + + L+ +YA CG+ SA+ +FD +
Sbjct: 116 LLQLCIKFKNLGDGERIYNHIKKSGVQPDIF-MWNTLINMYAKCGNTISAKQIFDDMREK 174
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V+ N ++ G ++EA M + + +K TF +L AC ++ KG++++
Sbjct: 175 DVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELY 234
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ + G++ D+ VG ALI+M+ KCG + A +VF + RD+V+WTSMI+G +
Sbjct: 235 NLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFK 294
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
+A LF+RM+ EG++P++ + AI+
Sbjct: 295 QACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAIL 354
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ Y + G A F + ++V+W AMI+GFAQ R +EA F M+ SGI+
Sbjct: 355 SMYTKCGSMEDALEVFDLVKGR----NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE 410
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN VT +L A +++ G++I + G D +AL+ MY+KCGSLKDA +
Sbjct: 411 PNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRV 470
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
FE +NV +WNAMI Y +H D+++ F+ +L+EG++ N T S+L+ C +
Sbjct: 471 FEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSL 530
Query: 402 EKGLEI-FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAG 457
E G + F MK G++ +V M G ++ A +L +P + N++
Sbjct: 531 ELGKWVHFLIMKA--GLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIA 588
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKE 515
F HG+ +A + E G+ KPD F L N CA+ E L ++ E
Sbjct: 589 GFVQ----HGKNQVAFDYFKMMQESGI-KPDKITFTGLLNACASPEALTEGRRLHALITE 643
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 226/457 (49%), Gaps = 55/457 (12%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G F EA+ + + + T+S +L+ C+ ++ G++++ + G + D+ +
Sbjct: 89 GQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMW 148
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N LI+MY+KCG SA+++F M E+DV SW ++ GY +EA L E+M + ++
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVK 208
Query: 212 PNQFTY-----------------------------------NAIIASYARRGDSNAAFAF 236
P++ T+ A+I + + GD A
Sbjct: 209 PDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKV 268
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F + DLVTW +MI+G A+ R +A LF+ M G++P+ V +L+A
Sbjct: 269 FDNLPTR----DLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNH 324
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+++ G+++HA + +G +++ G+A++ MY+KCGS++DA +F++ + +NV SW AM
Sbjct: 325 PEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAM 384
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I + +HG +D + F +M+E G+ N VT +S+L ACS +++G +I + E G
Sbjct: 385 IAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEA-G 443
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAV 473
++ M + G + +A+ + ++ + N+M A+ H + D A+
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQ----HEQYDNAL 499
Query: 474 TMGEEFFEMGLRKPDG--FVMLSNICAAD-----GEW 503
+ + G+ KP+ F + N+C + G+W
Sbjct: 500 ATFQALLKEGI-KPNSSTFTSILNVCKSSDSLELGKW 535
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 144/276 (52%), Gaps = 13/276 (4%)
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
+ D NA+++ +++ + NEA+++ + + S I+ T + +LQ ++ G
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
I+ + + G+ D+F + LI+MY+KCG+ A+ +F+ R K+V SWN ++G Y +HG+
Sbjct: 132 IYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
+ + +L E+M+++ ++ ++ T +S+L+AC+ V+KG E++ ++ + G
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELY-NLILKAGWDTDLFVGT 250
Query: 426 CVVDMLCRSGRMVEAYDLLRQVP----MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFE 481
+++M + G + +A + +P + T+ + G R HGR A + + E
Sbjct: 251 ALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR-----HGRFKQACNLFQRMEE 305
Query: 482 MGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKE 515
G+ +PD FV L C + + + MKE
Sbjct: 306 EGV-QPDKVAFVSLLRACNHPEALEQGKKVHARMKE 340
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/542 (33%), Positives = 299/542 (55%), Gaps = 43/542 (7%)
Query: 25 KSKALRQGKQVHALL-CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
K+K LR+GKQ+HALL C L + LV +Y+ CG+++ A +FD +P N +++W
Sbjct: 17 KTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN--LVSW 74
Query: 84 MVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
M S + N F EAI F MR +F FS ++AC L I+ GKQ+H +A +
Sbjct: 75 TAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALK 134
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
G +++ VG+ L DMYSKCG + A +VF M +D VSWT+MI GY + + +EA++
Sbjct: 135 FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLA 194
Query: 202 FERMKLE-----------------------------------GLEPNQFTYNAIIASYAR 226
F++M E G E + F NA+ Y++
Sbjct: 195 FKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSK 254
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
GD +A F + ++V++ +I G+ ++++ + L +F + GI+PN T
Sbjct: 255 AGDMESASNVFG---IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFT 311
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ +++A +++ G ++HA V ++ D F S L+DMY KCG L+ A F+
Sbjct: 312 FSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIG 371
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+WN+++ +G+HG+ +I++FERM++ G++ N +T IS+L+ CSH GLVE+GL+
Sbjct: 372 DPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLD 431
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F SM + YGV +EHY+CV+D+L R+GR+ EA + + ++P +F C IH
Sbjct: 432 YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIH 491
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
G +++ E+ ++ + V+LSNI A + +W + ++R M++ NV+K PG+S
Sbjct: 492 GDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSW 551
Query: 527 VE 528
V+
Sbjct: 552 VD 553
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 4/219 (1%)
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAF 236
RD + +I Y ++ L + G P F N ++ Y++ G+ + A
Sbjct: 3 RDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKL 62
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F M +LV+W AMISG +Q+ + +EA++ F GM + G P + ++A
Sbjct: 63 FDTMPQR----NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACAS 118
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
GSI++G+++H L + G+ ++F GS L DMYSKCG++ DA +FE K+ SW AM
Sbjct: 119 LGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAM 178
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
I Y K G + ++ F++M++E + ++ L S L AC
Sbjct: 179 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 8/289 (2%)
Query: 20 LGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFD-KIPNP 76
LG C KA + G+ VH+ + + +IF + + L +Y+ GD+ SA VF
Sbjct: 214 LGACGALKACKFGRSVHSSVVKLGFESDIF-VGNALTDMYSKAGDMESASNVFGIDSECR 272
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV ++ T ++ + F +R N+FTFS ++KAC +++G Q+H
Sbjct: 273 NVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLH 332
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A ++ F+ D V + L+DMY KCGLL A + F + + ++W S++S +
Sbjct: 333 AQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGK 392
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAM 255
+A+ +FERM G++PN T+ +++ + G +F M G VP ++ +
Sbjct: 393 DAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCV 452
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
I ++ R EA + M +PN L A + G ++G+
Sbjct: 453 IDLLGRAGRLKEAKEFINRM---PFEPNAFGWCSFLGACRIHGDKEMGK 498
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
V+Q T ++ G+++HAL+ G F + L++MYSKCG L A LF+ +N
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ SW AMI ++ +I F M G + S + AC+ G +E G ++
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM-H 129
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ ++G+ + + DM + G M +A + ++P
Sbjct: 130 CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 7/198 (3%)
Query: 19 LLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L+ C AL QG Q+HA + D + F + S LV +Y CG + A FD+I +P
Sbjct: 315 LIKACANQAALEQGTQLHAQVMKINFDEDPF-VSSILVDMYGKCGLLEQAIQAFDEIGDP 373
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQV 135
N +V G ++AI F M + + N TF +L C +++G
Sbjct: 374 TEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYF 433
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSK 194
+++ G + +ID+ + G L A+ + M FE + W S + G C +
Sbjct: 434 YSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL-GACRIHG 492
Query: 195 VDEAVVLFERMKLEGLEP 212
D+ + KL LEP
Sbjct: 493 -DKEMGKLAAEKLVKLEP 509
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 188/517 (36%), Positives = 283/517 (54%), Gaps = 47/517 (9%)
Query: 25 KSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
KSK++ Q+HA L L + L KL YA G ++ + VF+ PNVF +
Sbjct: 56 KSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSA 115
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
++ + + F A GY+S M N FTFS VLK+C ++ GK +H A ++G
Sbjct: 116 IIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAIKLG 171
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
+D+ V L+D+Y++ G + AR++F M ER +VS T+M++ Y + ++D+A LF
Sbjct: 172 LGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLF- 230
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
EG++ D+V WN MI G+AQS
Sbjct: 231 ----EGMKER----------------------------------DVVCWNVMIGGYAQSG 252
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
NE+LKLF+ MLV+ PN VTV VL A G G+++ GR IH+ + G+ I+V G+
Sbjct: 253 VPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGT 312
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
ALIDMYSKCGSL+DAR +F+ R K+V +WN+MI Y HG +++LFE M E G +
Sbjct: 313 ALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKP 372
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
++T I +LSAC HGGLVE+G FR M+++YG++ EHY C+V++L R+G + EAY L
Sbjct: 373 TDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGL 432
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
++ + + + G C +H L + + + L +V+LSN+ AA G W
Sbjct: 433 VKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNW 492
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVE---KRNEFVEKE 537
+R +MKE ++K+ G S +E K +EFV E
Sbjct: 493 EGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGE 529
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 272/483 (56%), Gaps = 7/483 (1%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
SL KL+ YA CG+ R +FD+I + NV N M+ + G +Q+A+ F M
Sbjct: 72 SLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQ 131
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
+ + +T+ VLKAC ++ G Q+H ++G + ++ +GN L+ MY KC L +A
Sbjct: 132 GFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAA 191
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR 227
RRV M RD+VSW SM++GY + ++A+ L M+ L+P+ T +++ +
Sbjct: 192 RRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNT 251
Query: 228 GDSNAAFA--FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
N + F ++ + L++WN MI+ + + NEA+ L+ M V G++P+ V
Sbjct: 252 SCDNVLYVKDMFVKLKEKS----LISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAV 307
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
+++ VL A G + +GR IH V R L ++ +ALIDMY+KCG LK+AR +F+
Sbjct: 308 SISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQM 367
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
++V SW +MI YG G ++ LF++M + G + + +SVL+ACSH GLV++G
Sbjct: 368 MFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGR 427
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
F M E YG+ EHY C+VD+L R+G++ EAY L RQ+PM + G+ + C +
Sbjct: 428 YCFNLMAE-YGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRV 486
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
+ ++A+ + F++ + +V+LSNI A G W + E +R IM K ++K PG S
Sbjct: 487 YSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNS 546
Query: 526 RVE 528
VE
Sbjct: 547 NVE 549
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 10/193 (5%)
Query: 304 REIHA-LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGK 362
+++H+ ++ LH + G L+ Y+ CG R +F+ KNV +N MI Y
Sbjct: 55 KKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVN 114
Query: 363 HGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
+G+ ++ +F+ M +G + T VL ACS G + GL+I ++ + G+ ++
Sbjct: 115 NGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVV-KLGLDMNLY 173
Query: 423 HYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEF 479
+V M + + A +L ++P M NSM + +GR + A+ + E
Sbjct: 174 IGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQ----NGRFNDALKLCREM 229
Query: 480 FEMGLRKPDGFVM 492
++ L KPD M
Sbjct: 230 EDLKL-KPDAGTM 241
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/542 (33%), Positives = 298/542 (54%), Gaps = 43/542 (7%)
Query: 25 KSKALRQGKQVHALL-CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
K+K LR+GKQ+HALL C L + LV +Y+ CG+++ A +FD +P N +++W
Sbjct: 17 KTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN--LVSW 74
Query: 84 MVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
M S + N F EAI F MR +F FS ++AC L I+ GKQ+H +A +
Sbjct: 75 TAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALK 134
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
G +++ VG+ L DMYSKCG + A +VF M +D VSWT+MI GY + + +EA++
Sbjct: 135 FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLA 194
Query: 202 FERMKLE-----------------------------------GLEPNQFTYNAIIASYAR 226
F++M E G E + F NA+ Y++
Sbjct: 195 FKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSK 254
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
GD +A F + ++V++ +I G+ ++++ + L +F + GI+PN T
Sbjct: 255 AGDMESASNVFG---IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFT 311
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ +++A +++ G ++HA V ++ D F S L+DMY KCG L+ A F+
Sbjct: 312 FSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIG 371
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+WN+++ +G+HG+ +I+ FERM++ G++ N +T IS+L+ CSH GLVE+GL+
Sbjct: 372 DPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLD 431
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F SM + YGV +EHY+CV+D+L R+GR+ EA + + ++P +F C IH
Sbjct: 432 YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIH 491
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
G +++ E+ ++ + V+LSNI A + +W + ++R M++ NV+K PG+S
Sbjct: 492 GDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSW 551
Query: 527 VE 528
V+
Sbjct: 552 VD 553
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 4/219 (1%)
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAF 236
RD + +I Y ++ L + G P F N ++ Y++ G+ + A
Sbjct: 3 RDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKL 62
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F M +LV+W AMISG +Q+ + +EA++ F GM + G P + ++A
Sbjct: 63 FDTMPQR----NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACAS 118
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
GSI++G+++H L + G+ ++F GS L DMYSKCG++ DA +FE K+ SW AM
Sbjct: 119 LGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAM 178
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
I Y K G + ++ F++M++E + ++ L S L AC
Sbjct: 179 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 136/289 (47%), Gaps = 8/289 (2%)
Query: 20 LGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFD-KIPNP 76
LG C KA + G+ VH+ + + +IF + + L +Y+ GD+ SA VF
Sbjct: 214 LGACGALKACKFGRSVHSSVVKLGFESDIF-VGNALTDMYSKAGDMESASNVFGIDSECR 272
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV ++ T ++ + F +R N+FTFS ++KAC +++G Q+H
Sbjct: 273 NVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLH 332
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A ++ F+ D V + L+DMY KCGLL A + F + + ++W S++S +
Sbjct: 333 AQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGK 392
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAM 255
+A+ FERM G++PN T+ +++ + G +F M G VP ++ +
Sbjct: 393 DAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCV 452
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
I ++ R EA + M +PN L A + G ++G+
Sbjct: 453 IDLLGRAGRLKEAKEFINRM---PFEPNAFGWCSFLGACRIHGDKEMGK 498
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
V+Q T ++ G+++HAL+ G F + L++MYSKCG L A LF+ +N
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ SW AMI ++ +I F M G + S + AC+ G +E G ++
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM-H 129
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ ++G+ + + DM + G M +A + ++P
Sbjct: 130 CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 7/198 (3%)
Query: 19 LLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L+ C AL QG Q+HA + D + F + S LV +Y CG + A FD+I +P
Sbjct: 315 LIKACANQAALEQGTQLHAQVMKINFDEDPF-VSSILVDMYGKCGLLEHAIQAFDEIGDP 373
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQV 135
N +V G ++AI +F M + + N TF +L C +++G
Sbjct: 374 TEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYF 433
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSK 194
+++ G + +ID+ + G L A+ + M FE + W S + G C +
Sbjct: 434 YSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL-GACRIHG 492
Query: 195 VDEAVVLFERMKLEGLEP 212
D+ + KL LEP
Sbjct: 493 -DKEMGKLAAEKLVKLEP 509
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 295/523 (56%), Gaps = 23/523 (4%)
Query: 25 KSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGC-GDVNSARLVFDKIPNPNVFML 81
+ ++LRQ KQVHAL+ + +L+ + G G ARLVFD+IP+P+ FM
Sbjct: 17 RCRSLRQIKQVHALMVLRGFLSDPSALRELIFASSVGVRGGTAHARLVFDRIPHPDRFMY 76
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRC------NKFTFSIVLKACVGLLDIKKGKQV 135
N ++ +A + ++A+ ++ M C +K TF VL+AC + + G QV
Sbjct: 77 NTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGASETGAQV 136
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA + G E+D V NALI M++ CG L +A +F G D V+W++MISG+ +
Sbjct: 137 HAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAMISGFARRGDI 196
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
A LF+ ++ L ++N +I +YA+ GD A F D+V+WNAM
Sbjct: 197 GAARELFDESPVKDL----VSWNVMITAYAKLGDMAPARELFDGAPDR----DVVSWNAM 248
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC---- 311
ISG+ + +A++LF+ M G KP+ VT+ +L A +G + GR +H +
Sbjct: 249 ISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLSGRFS 308
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
R+G G+ALIDMY+KCGS+ A +F + + KNV++WN++IG HG V +I+
Sbjct: 309 RIG--PSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAID 366
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
+F++ML+ ++ +E+T ++VL ACSHGG+V+KG E F M++RY ++ + +HY C+VDML
Sbjct: 367 VFQKMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVDML 426
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
R+G + EA++ + + + + C IHG +LA +E + FV
Sbjct: 427 SRAGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGELELAEHANQELLKARSDASGDFV 486
Query: 492 MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFV 534
+LSNI A+ GEW +EN+RK+M + V K+ G + V+ ++ V
Sbjct: 487 LLSNIYASVGEWLGSENMRKLMDDSGVNKEAGCAVVDGSSKDV 529
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 290/548 (52%), Gaps = 45/548 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C +AL QGK+VHA + L+ + + L+ +Y CG + A VF+ + N
Sbjct: 312 LLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRN 371
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
V ++W M + F G +EA +F+ M E N+ TF +L AC +K+G+Q+
Sbjct: 372 V--VSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQI 429
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + G+ D V AL+ MY+KCG L AR VF + +++VV+W +MI+ Y K
Sbjct: 430 HDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKY 489
Query: 196 DEAVVLFERMKLEGLEPNQFTY-----------------------------------NAI 220
D AV F+ + EG++P+ T+ NA+
Sbjct: 490 DNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNAL 549
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
++ + GD +A F+ M DLV+WN +I+GF Q A FK M SG+
Sbjct: 550 VSMFVNCGDLMSAMNLFNDMPER----DLVSWNTIIAGFVQHGENQFAFDYFKMMQESGV 605
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
KP+ +T TG+L A ++ GR +HAL+ L DV G+ LI MY+KCGS+ DA
Sbjct: 606 KPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHL 665
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F KNV SW +MI Y +HG ++ELF +M +EG++ + +T + LSAC+H GL
Sbjct: 666 VFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGL 725
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
+++GL F SMK+ + ++ EHY C+VD+ R+G + EA + + ++ + + + GA
Sbjct: 726 IKEGLHHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALL 784
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
C +H +LA + ++ E+ +V+LSNI AA G W E +RK+M ++ V K
Sbjct: 785 GACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVK 844
Query: 521 QPGFSRVE 528
+PG S +E
Sbjct: 845 KPGQSWIE 852
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/539 (29%), Positives = 270/539 (50%), Gaps = 53/539 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C+K K L G+++H + + + +IF + + L+ +YA CG+ NSA+ +FD++P+
Sbjct: 110 LLQLCIKHKNLGDGERIHNHIKFSKIQPDIF-MWNMLISMYAKCGNTNSAKQIFDEMPDK 168
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V+ N ++ ++EA M + + +K+TF +L AC ++ KG ++
Sbjct: 169 DVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELF 228
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ G++ D+ VG ALI+M+ KCG + A +VF+ + RD+++WTSMI+G +
Sbjct: 229 SLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFK 288
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
+A LF+ M+ EG++P++ + A++
Sbjct: 289 QACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALL 348
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ Y + G A F+ + ++V+W AMI+GFAQ R EA F M+ SGI+
Sbjct: 349 SMYTKCGSMEDALEVFNLVKGR----NVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIE 404
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN VT +L A +++ GR+IH + + G D +AL+ MY+KCGSL DAR +
Sbjct: 405 PNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNV 464
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
FE +NV +WNAMI Y +H D+++ F+ +L+EG++ + T S+L+ C +
Sbjct: 465 FERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDAL 524
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGA 458
E G + +S+ R G + +V M G ++ A +L +P + N++
Sbjct: 525 ELG-KWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAG 583
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKE 515
F HG A + E G+ KPD F L N CA+ E L ++ E
Sbjct: 584 FVQ----HGENQFAFDYFKMMQESGV-KPDQITFTGLLNACASPEALTEGRRLHALITE 637
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 232/442 (52%), Gaps = 51/442 (11%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
++ T+S +L+ C+ ++ G+++H + D+ + N LI MY+KCG SA+++F
Sbjct: 103 HRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIF 162
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M ++DV SW ++ GY + +EA L E+M +G++P+++T+ ++ + A + +
Sbjct: 163 DEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVD 222
Query: 232 AAFAFFSRMTAEGF-----------------------------VP--DLVTWNAMISGFA 260
FS + G+ +P DL+TW +MI+G A
Sbjct: 223 KGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLA 282
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
+ ++ +A LF+ M G++P+ V +L+A +++ G+ +HA + +GL +++
Sbjct: 283 RHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIY 342
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
G+AL+ MY+KCGS++DA +F + + +NV SW AMI + +HG ++ + F +M+E G
Sbjct: 343 VGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESG 402
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHY-ACVVDMLCRSGRMV 438
+ N VT +S+L ACS +++G +I R +K Y I+ + ++ M + G ++
Sbjct: 403 IEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGY---ITDDRVRTALLSMYAKCGSLM 459
Query: 439 EAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVML 493
+A ++ ++ + N+M A+ H + D AV + + G+ KPD F +
Sbjct: 460 DARNVFERISKQNVVAWNAMITAYVQ----HEKYDNAVATFQALLKEGI-KPDSSTFTSI 514
Query: 494 SNICAAD-----GEWHEAENLR 510
N+C + G+W ++ +R
Sbjct: 515 LNVCKSPDALELGKWVQSLIIR 536
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 175/355 (49%), Gaps = 25/355 (7%)
Query: 151 GNALIDMYSKCGLLCSARRVF------HGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
NA ++ SK G L A V H R +++S++ + + +
Sbjct: 72 ANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQ--TYSSLLQLCIKHKNLGDGERIHNH 129
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
+K ++P+ F +N +I+ YA+ G++N+A F M + D+ +WN ++ G+ Q +R
Sbjct: 130 IKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDK----DVYSWNLLLGGYVQHRR 185
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
EA +L + M+ G+KP+ T +L A ++ G E+ +L+ G D+F G+A
Sbjct: 186 YEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTA 245
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
LI+M+ KCG + DA +F +++ +W +MI +H + LF+ M EEG++ +
Sbjct: 246 LINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPD 305
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY--ACVVDMLCRSGRM---VE 439
+V +S+L AC+H +E+G + MKE V + E Y ++ M + G M +E
Sbjct: 306 KVAFVSLLKACNHPEALEQGKRVHARMKE---VGLDTEIYVGTALLSMYTKCGSMEDALE 362
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
++L++ + +M F HGR + A + E G+ +P+ +S
Sbjct: 363 VFNLVKGRNVVSWTAMIAGFAQ----HGRMEEAFLFFNKMIESGI-EPNRVTFMS 412
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 180/365 (49%), Gaps = 28/365 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLC----TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
+L C AL GK V +L+ +DL+I ++ LV ++ CGD+ SA +F+ +P
Sbjct: 514 ILNVCKSPDALELGKWVQSLIIRAGFESDLHI---RNALVSMFVNCGDLMSAMNLFNDMP 570
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
++ N ++ G Q A YF +M+E + ++ TF+ +L AC + +G++
Sbjct: 571 ERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRR 630
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+HA+ T+ + DV VG LI MY+KCG + A VFH + +++V SWTSMI+GY +
Sbjct: 631 LHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGR 690
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
EA+ LF +M+ EG++P+ T+ +++ A G F M P + +
Sbjct: 691 GKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEPRMEHYGC 750
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI--GREIHALVCR 312
M+ F ++ +EA++ M V KP++ G L G+ Q+ E+ V +
Sbjct: 751 MVDLFGRAGLLHEAVEFINKMQV---KPDSRL------WGALLGACQVHLDVELAEKVAQ 801
Query: 313 MGLHIDVFTGSALI---DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM-VDS 368
L +D + ++Y+ G K E+T+++ V ++ G+ + VD
Sbjct: 802 KKLELDPNDDGVYVILSNIYAAAGMWK------EVTKMRKVMLDRGVVKKPGQSWIEVDG 855
Query: 369 SIELF 373
+ +F
Sbjct: 856 RVHIF 860
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 189/535 (35%), Positives = 293/535 (54%), Gaps = 41/535 (7%)
Query: 30 RQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
R Q+HA L + L L +K V G++ AR VFD+ P P+VF+ N ++
Sbjct: 85 RHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGY 144
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
+ F +AI +S M+ + FT VLKAC G+ ++ GK+VH ++GFE+DV
Sbjct: 145 SSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDV 204
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
V N L+ +Y+KCG + AR VF G+ +R++VSWTSMISGY EA+ +F +M+
Sbjct: 205 FVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQR 264
Query: 209 GLEPN--------------------------------QFTYNAII---ASYARRGDSNAA 233
++P+ +F + +I A YA+ G A
Sbjct: 265 NVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVA 324
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
+FF +M +P+++ WNAMISG+A++ NEA+ LF+ M+ I+ +++TV + A
Sbjct: 325 RSFFDQME----IPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILA 380
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
GS+ + + + + + DVF +ALIDM++KCGS+ AR +F+ T K+V W
Sbjct: 381 CAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVW 440
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
+AMI YG HG +I+LF M + G+ N+VT + +L+AC+H GLVE+G E+F SMK
Sbjct: 441 SAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMK- 499
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAV 473
YG++ +HYACVVD+L RSG + EAYD + +P+ S+ GA C I+ L
Sbjct: 500 YYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGE 559
Query: 474 TMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
E+ F + +V LSN+ A+ W +R +M+EK + K G+S +E
Sbjct: 560 YAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIE 614
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 177/383 (46%), Gaps = 47/383 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L C+L C L GK+VH + + ++F +++ LV +YA CG V AR+VF+ +
Sbjct: 172 LPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVF-VQNGLVALYAKCGRVEQARIVFEGL 230
Query: 74 PNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+ N+ ++W M S + N EA+ F MR+ + + VL+A + D+++
Sbjct: 231 DDRNI--VSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQ 288
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GK +H +MG E + + +L MY+KCG + AR F M +V+ W +MISGY
Sbjct: 289 GKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAK 348
Query: 192 VSKVDEAVVLFERMKLEGLEPNQ-----------------------------------FT 216
+EAV LF+ M + + + F
Sbjct: 349 NGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFV 408
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
A+I +A+ G + A F R + D+V W+AMI G+ R +A+ LF M
Sbjct: 409 NTALIDMFAKCGSVDLAREVFDRTLDK----DVVVWSAMIVGYGLHGRGQDAIDLFYAMK 464
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+G+ PN+VT G+L A +G ++ G E+ + G+ + ++D+ + G L
Sbjct: 465 QAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLN 524
Query: 337 DARTLFEITRIK-NVASWNAMIG 358
+A I+ V+ W A++G
Sbjct: 525 EAYDFITTMPIEPGVSVWGALLG 547
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 192/580 (33%), Positives = 301/580 (51%), Gaps = 48/580 (8%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDV 63
I P +N LD M L +GK++H L LN + + LV + CGDV
Sbjct: 225 ISPDKVTYINLLDAFTTPSM----LDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDV 280
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
+SA+ F I + +V + N ++ A A G+ EA + MR N+ T+ +L AC
Sbjct: 281 DSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNAC 340
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
++ GK +H+ ++ G +DV +GNALI MY++CG L AR +F+ M +RD++SW
Sbjct: 341 STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWN 400
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------- 217
++I+GY EA+ L+++M+ EG++P + T+
Sbjct: 401 AIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS 460
Query: 218 ---------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
NA++ Y R G A F A D+++WN+MI+G AQ A
Sbjct: 461 GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR----DVISWNSMIAGHAQHGSYETA 516
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
KLF+ M ++P+N+T VL ++++G++IH + GL +DV G+ALI+M
Sbjct: 517 YKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINM 576
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE-VT 387
Y +CGSL+DAR +F + ++V SW AMIG G +IELF +M EG R + T
Sbjct: 577 YIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGST 636
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
S+LSAC+H GLV +G +IF SM+ YGV + EHY C+V +L R+ R EA L+ Q+
Sbjct: 637 FTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQM 696
Query: 448 PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAE 507
P ++ C IHG LA ++ R P +++LSN+ AA G W +
Sbjct: 697 PFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVA 756
Query: 508 NLRKIMKEKNVQKQPGFSRVEKRN---EFVEKEVQNESKA 544
+R++M+ + ++K+PG S +E N EF+ + + A
Sbjct: 757 KIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETA 796
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 145/518 (27%), Positives = 248/518 (47%), Gaps = 42/518 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C L GK++H+ + +++ L+ +Y CGD+ AR VF I +
Sbjct: 134 ILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRD 193
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V N M+ A +E +G F M +K T+ +L A + +GK++H
Sbjct: 194 VVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHK 253
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ + G +D+ VG AL+ M +CG + SA++ F G+ +RDVV + ++I+ E
Sbjct: 254 LTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVE 313
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
A + RM+ +G+ N+ TY NA+I+
Sbjct: 314 AFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALIS 373
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YAR GD A F M DL++WNA+I+G+A+ + EA++L+K M G+KP
Sbjct: 374 MYARCGDLPKARELFYTMPKR----DLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKP 429
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
VT +L A + + G+ IH + R G+ + +AL++MY +CGSL +A+ +F
Sbjct: 430 GRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVF 489
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E T+ ++V SWN+MI + +HG +++ +LF+ M E + + +T SVLS C + +E
Sbjct: 490 EGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALE 549
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
G +I + E G+++ +++M R G + +A ++ + S A G
Sbjct: 550 LGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWT-AMIGG 607
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
C G A+ + + G R PDG S + A +
Sbjct: 608 CADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACN 645
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 226/463 (48%), Gaps = 43/463 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C + + L + K++HA + + +IF L + L+ +Y C V A VF ++P
Sbjct: 33 LLQNCTRKRLLPEAKRIHAQMVEAGVGPDIF-LSNLLINMYVKCRSVLDAHQVFKEMPRR 91
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V N ++ A G ++A F M+ + NK T+ +L AC +++ GK++H
Sbjct: 92 DVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIH 151
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ + G++ D V N+L+ MY KCG L AR+VF G+ RDVVS+ +M+ Y + V
Sbjct: 152 SQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVK 211
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
E + LF +M EG+ P++ TY A++
Sbjct: 212 ECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALV 271
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
R GD ++A F + D+V +NA+I+ AQ EA + + M G+
Sbjct: 272 TMCVRCGDVDSAKQAFKGIADR----DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVA 327
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
N T +L A + +++ G+ IH+ + G DV G+ALI MY++CG L AR L
Sbjct: 328 LNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAREL 387
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F +++ SWNA+I Y + ++ L+++M EG++ VT + +LSAC++
Sbjct: 388 FYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY 447
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
G I + R G+K + +++M R G ++EA ++
Sbjct: 448 ADGKMIHEDIL-RSGIKSNGHLANALMNMYRRCGSLMEAQNVF 489
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 171/373 (45%), Gaps = 42/373 (11%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
++ T+ +L+ C + + K++HA + G D+ + N LI+MY KC + A +VF
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------- 217
M RDV+SW S+IS Y +A LFE M+ G PN+ TY
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 218 ---------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVP-DLVTWNAM 255
N++++ Y + GD A F+ G P D+V++N M
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFA-----GISPRDVVSYNTM 200
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ +AQ E L LF M GI P+ VT +L A + G+ IH L GL
Sbjct: 201 LGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGL 260
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+ D+ G+AL+ M +CG + A+ F+ ++V +NA+I +HG + E + R
Sbjct: 261 NSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYR 320
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M +G+ N T +S+L+ACS +E G I + E G + ++ M R G
Sbjct: 321 MRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED-GHSSDVQIGNALISMYARCG 379
Query: 436 RMVEAYDLLRQVP 448
+ +A +L +P
Sbjct: 380 DLPKARELFYTMP 392
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 31/230 (13%)
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW------------------ 252
E ++ TY A++ + R+ A ++M G PD+
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 253 -------------NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
N++IS +AQ + +A +LF+ M +G PN +T +L A
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
++ G++IH+ + + G D ++L+ MY KCG L AR +F ++V S+N M+G
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
Y + V + LF +M EG+ ++VT I++L A + ++++G I +
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHK 253
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 197/553 (35%), Positives = 289/553 (52%), Gaps = 43/553 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C L G+ VHA L L+ +L + L +YA C AR VFD++P +
Sbjct: 231 LLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARD 290
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N +V A G + A+G M+E R + T VL AC + ++VH
Sbjct: 291 RVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVH 350
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A A + GF+ V+V A++D+Y KCG + SAR+VF GM +R+ VSW +MI GY
Sbjct: 351 AFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDAT 410
Query: 197 EAVVLFERMKLEG-----------------------------------LEPNQFTYNAII 221
EA+ LF+RM EG LE N NA+I
Sbjct: 411 EALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALI 470
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y + ++ A F + G+ V+WNAMI G Q+ +A++LF M + +K
Sbjct: 471 TMYCKCKRTDLAAQVFDEL---GY-KTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVK 526
Query: 282 PNNVTVTGVLQA-GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P++ T+ ++ A ++ +Q R IH R+ L DV+ +ALIDMY+KCG + AR+
Sbjct: 527 PDSFTLVSIIPALADISDPLQ-ARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARS 585
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
LF R ++V +WNAMI YG HG ++ELFE M G NE T +SVLSACSH GL
Sbjct: 586 LFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGL 645
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V++G E F SMKE YG++ EHY +VD+L R+G++ EA+ ++++PM S+ GA
Sbjct: 646 VDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAML 705
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
C +H +LA + FE+ + V+L+NI A W + +R M++K +QK
Sbjct: 706 GACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQK 765
Query: 521 QPGFSRVEKRNEF 533
PG+S V+ +NE
Sbjct: 766 TPGWSIVQLKNEI 778
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 151/555 (27%), Positives = 235/555 (42%), Gaps = 96/555 (17%)
Query: 25 KSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
K K R+ + +LC+ SL S + D + ARL
Sbjct: 153 KKKTSRELAECVGMLCSAASASSSLPSPITAATHAAPDDHHARL---------------- 196
Query: 85 VMASAFTGNFQEAIGYFSLMREF-----IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
A+A + + A+ F+ M + R TF+ +LK C D+ G+ VHA
Sbjct: 197 -RAAASRSDLRGALAAFAAMSPASGSGPVLR----TFTSLLKLCAARADLATGRAVHAQL 251
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
G + AL +MY+KC ARRVF M RD V+W ++++GY + AV
Sbjct: 252 AARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAV 311
Query: 200 VLFERMKLE-GLEPNQFTY-----------------------------------NAIIAS 223
+ RM+ E G P+ T AI+
Sbjct: 312 GMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDV 371
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
Y + G ++A F M + V+WNAMI G+A++ EAL LFK M+ G+
Sbjct: 372 YCKCGAVDSARKVFDGMQDR----NSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVT 427
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+V+V L A G G + GR +H L+ R+GL +V +ALI MY KC A +F+
Sbjct: 428 DVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFD 487
Query: 344 ITRIKNVASWNAMI-GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
K SWNAMI GC ++G + ++ LF RM E ++ + TL+S++ A +
Sbjct: 488 ELGYKTRVSWNAMILGCT-QNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALA------ 540
Query: 403 KGLEIFRSMKER----YGVKISKEH----YACVVDMLCRSGRMVEAYDLL---RQVPMYV 451
+I ++ R Y +++ + ++DM + GR+ A L R +
Sbjct: 541 ---DISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVIT 597
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICAADGEWHEAENL 509
N+M +G HG +AV + EE G + P+ LS + C+ G E +
Sbjct: 598 WNAMI----HGYGSHGSGKVAVELFEEMKSSG-KVPNETTFLSVLSACSHAGLVDEGQEY 652
Query: 510 RKIMKEKNVQKQPGF 524
MKE + +PG
Sbjct: 653 FSSMKE-DYGLEPGM 666
>gi|297796913|ref|XP_002866341.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312176|gb|EFH42600.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 280/482 (58%), Gaps = 5/482 (1%)
Query: 25 KSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+ + L G +HA L T+ + + + +KLV Y CG V AR VFD++P ++ W
Sbjct: 28 RDRLLCGGIVLHAHLVTSGIARLTRIAAKLVSFYVECGKVLDARKVFDEMPKRDIS--GW 85
Query: 84 MVM--ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
+VM A A G +QE++ F M + + + F +LKA LLD + GK +H + +
Sbjct: 86 VVMIGACARYGYYQESLDIFREMNKEGLKLDVFIVPSLLKASRNLLDREFGKMIHCLVLK 145
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
FE+D + ++LIDMYSK G + +AR+VF + E+D+V + +MISGY N S+ DEA+ L
Sbjct: 146 CSFESDAFIVSSLIDMYSKFGEVVNARKVFDDLGEQDLVVFNAMISGYANNSQADEALNL 205
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
+ MKL G++P+ T+NA+I+ ++ G+ M +G++PD+V+W ++ISG
Sbjct: 206 VKDMKLLGIKPDIITWNALISGFSHMGNEEKVSEILELMCLDGYMPDVVSWTSIISGLVH 265
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
+ + +A FK ML G+ PN+ T+T +L A +++ G+EIH GL F
Sbjct: 266 NFQNEKAFDAFKQMLTHGLYPNSATITTLLPACTTLANMKHGKEIHGYSVVTGLEDHGFV 325
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
SAL+DMY KCG + +A LF T K ++N+MI CY HG+ D ++ELF++M G
Sbjct: 326 RSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLSDKAVELFDQMEATGE 385
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
+ + +T ++L+ACSH GL + G +F M+ +Y ++ EHYAC+VD+L R+G++VEAY
Sbjct: 386 KLDHLTFTAILTACSHAGLTDLGQNLFHLMQTKYRIEPRLEHYACMVDLLGRAGKLVEAY 445
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
++++ + M + GA C HG +LA + E+ ++L+++ A G
Sbjct: 446 EMMKTMRMEPDLFVWGALLGACRNHGNMELARIAAKRLAELEPENSGNGLLLTSLYADVG 505
Query: 502 EW 503
W
Sbjct: 506 SW 507
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 295/551 (53%), Gaps = 44/551 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C LR+GKQ+H+ L +++ + ++ L+ +Y GD+ A +FD N
Sbjct: 250 LLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTN 309
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V + N M++A + ++ F M R NKFT+ +L+ C +I G+Q+H+
Sbjct: 310 VVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHS 369
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ + GF++D+ V LIDMYSK G L A+R+ + E+DVVSWTSMI+GY E
Sbjct: 370 LTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKE 429
Query: 198 AVVLFERMKLEGLEPNQF-----------------------------------TYNAIIA 222
A+ F+ M+ G+ P+ +N ++
Sbjct: 430 ALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVY 489
Query: 223 SYARRGDSNAAFAFFSRMT-AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YAR G S AF+ F + EG +TWN +ISGFAQS EALK+F M +G K
Sbjct: 490 LYARCGISKEAFSSFEAIEHKEG-----ITWNGLISGFAQSGLYEEALKVFMKMDQAGAK 544
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR-T 340
N T + A I+ G++IHA V + G + +ALI +Y KCGS++DA+
Sbjct: 545 YNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMD 604
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
FE+T+ +N SWN +I C +HG +++LF++M ++G++ ++VT + VL+ACSH GL
Sbjct: 605 FFEMTK-RNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGL 663
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
VE+GL F+SM +G+ +HYACVVD+L R+G++ A + ++P+ + +
Sbjct: 664 VEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLL 723
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+ C +H ++ + E+ +V+LSN A G+W + +RKIMK++ V+K
Sbjct: 724 SACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRK 783
Query: 521 QPGFSRVEKRN 531
+PG S +E +N
Sbjct: 784 EPGRSWIEVKN 794
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 183/393 (46%), Gaps = 45/393 (11%)
Query: 53 LVGVYAGCGDVNSARLVFDKIP-NPNVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIY 109
L+ +YA G V AR VF+++ NV +W+ + S + N +EA+ + M
Sbjct: 83 LIDLYAKKGFVRRARRVFEELSVRDNV---SWVAVLSGYAQNGLGEEAVRLYREMHRSGV 139
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
+ S +L AC + G+ +H + GF ++ VGNALI +Y +C A R
Sbjct: 140 VPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADR 199
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------ 223
VF M D V++ ++ISG+ D A+ +F+ M+L GL P+ T +++A+
Sbjct: 200 VFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGD 259
Query: 224 -----------------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
Y + GD A F G ++V WN
Sbjct: 260 LRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFD----SGDRTNVVLWNL 315
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M+ + Q ++ +F ML +G++PN T +L+ TG I +G +IH+L + G
Sbjct: 316 MLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNG 375
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
D++ LIDMYSK G L A+ + ++ K+V SW +MI Y +H ++E F+
Sbjct: 376 FQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFK 435
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
M G+ + + L S +SAC+ V +G +I
Sbjct: 436 EMQACGIWPDNIGLASAISACAGIKAVHQGSQI 468
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 132/545 (24%), Positives = 243/545 (44%), Gaps = 44/545 (8%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDK 72
L +L C K++ + G+ +H + FS + + L+ +Y C A VF
Sbjct: 146 LSSILSACTKTELFQLGRLIHVQVYKQ--GFFSETFVGNALISLYLRCRSFRLADRVFCD 203
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ + N ++ A G+ A+G F M+ + T + +L AC + D++KG
Sbjct: 204 MLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKG 263
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
KQ+H+ + G D + +L+D+Y K G + A ++F +VV W M+ Y +
Sbjct: 264 KQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQI 323
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL--- 249
+ ++ +F RM G+ PN+FTY ++ + G+ S GF D+
Sbjct: 324 DDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVS 383
Query: 250 ----------------------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
V+W +MI+G+ Q + EAL+ FK M GI
Sbjct: 384 GVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIW 443
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+N+ + + A ++ G +IHA V G DV + L+ +Y++CG K+A +
Sbjct: 444 PDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSS 503
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
FE K +WN +I + + G+ + ++++F +M + G + N T +S +SA ++ +
Sbjct: 504 FEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADI 563
Query: 402 EKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA-GAF 459
++G +I R +K Y + E ++ + + G + +A + M N ++
Sbjct: 564 KQGKQIHARVIKTGYTSET--EISNALISLYGKCGSIEDAK--MDFFEMTKRNEVSWNTI 619
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENLRKIMK-EKN 517
C+ HGR A+ + ++ + GL+ D FV + C+ G E K M E
Sbjct: 620 ITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHG 679
Query: 518 VQKQP 522
+ +P
Sbjct: 680 IHPRP 684
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 187/388 (48%), Gaps = 49/388 (12%)
Query: 103 LMREFIYRCNKF------TFSIVLKACVGLLDIKKGK------QVHAVATQMGFENDVSV 150
L+ F +C ++ F+ L+AC G G+ ++HA A G +
Sbjct: 25 LLPLFAAKCRQYMVLGAVDFACALRACRG-----SGRRWPLVPEIHAKAIICGLSGYRII 79
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
GN LID+Y+K G + ARRVF + RD VSW +++SGY +EAV L+ M G+
Sbjct: 80 GNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGV 139
Query: 211 EPNQFTYNAIIAS----------------------YARRGDSNA---------AFAFFSR 239
P + ++I+++ ++ NA +F R
Sbjct: 140 VPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADR 199
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
+ + D VT+N +ISG AQ + AL +F M +SG+ P++VT+ +L A G
Sbjct: 200 VFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGD 259
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
++ G+++H+ + + G+ +D +L+D+Y K G +++A +F+ NV WN M+
Sbjct: 260 LRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVA 319
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
YG+ + S ++F RML G+R N+ T +L C+H G + G +I S+ + G +
Sbjct: 320 YGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQI-HSLTIKNGFQS 378
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQV 447
++DM + G + +A +L +
Sbjct: 379 DMYVSGVLIDMYSKYGWLDKAQRILDMI 406
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/477 (36%), Positives = 270/477 (56%), Gaps = 48/477 (10%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
RLVF ++ PN F+ ++ A G F E++ ++ MR FTF+ +LKAC
Sbjct: 92 PRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSA 151
Query: 126 LLDIKKGKQVHAVATQMG-FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
LD+ G+QVH +G F +D+ VGN LIDMY KCG L RVF M +RDV+SWTS
Sbjct: 152 ALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTS 211
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEG 244
+I +YA+ G+ AA F + +
Sbjct: 212 LI-----------------------------------VAYAKVGNMEAASELFDGLPMK- 235
Query: 245 FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
D+V W AM++G+AQ+ R EAL++F+ M +G+K + VT+ GV+ A G+ +
Sbjct: 236 ---DMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYAN 292
Query: 305 EIHALVCRMGLHI--DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGK 362
+ + + G +V GSALIDMY+KCGS++DA +FE +NV S+++MI +
Sbjct: 293 WVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAM 352
Query: 363 HGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
HG+ +++ELF+ ML+ ++ N VT I VL+ACSH G+VE+G ++F M+E +GV S++
Sbjct: 353 HGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSED 412
Query: 423 HYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM 482
HYAC+VD+L R+GR+ EA +L++ +PM + GA C IHG D+A FE+
Sbjct: 413 HYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFEL 472
Query: 483 GLRKPDG---FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEK 536
+P+G +++LSNI A+ G W + +RK+M+ K ++K PG S VE + + +
Sbjct: 473 ---EPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHE 526
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 119/238 (50%), Gaps = 8/238 (3%)
Query: 43 DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ--EAIGY 100
D ++ S S +V YA G++ +A +FD +P + M+ W M + + N + EA+
Sbjct: 203 DRDVISWTSLIVA-YAKVGNMEAASELFDGLPMKD--MVAWTAMVTGYAQNARPREALEV 259
Query: 101 FSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF--ENDVSVGNALIDMY 158
F M+ + ++ T V+ AC L K V VA Q GF ++V VG+ALIDMY
Sbjct: 260 FERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMY 319
Query: 159 SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYN 218
+KCG + A +VF M ER+V S++SMI G+ A+ LF+ M ++PN+ T+
Sbjct: 320 AKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFI 379
Query: 219 AIIASYARRGDSNAAFAFFSRM-TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
++ + + G F+ M G P + M+ ++ R EAL L K M
Sbjct: 380 GVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMM 437
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 185/546 (33%), Positives = 293/546 (53%), Gaps = 38/546 (6%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
L C + + L GK++H + + + L+ +YA CG++ S+ VF+ I NV
Sbjct: 161 LKACTEVQDLDNGKKIHCQIVKVPSFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNV- 219
Query: 80 MLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ W M + + N ++E + F+ MRE N++T+ ++ AC L + +GK H
Sbjct: 220 -VCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHG 278
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ G E + +L+DMY KCG + +ARRVF+ D+V WT+MI GY + V+E
Sbjct: 279 CLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE 338
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRG------------------DSNAAFAFFSR 239
A+ LF++M G++PN T ++++ G D+N A A
Sbjct: 339 ALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTNVANALV-H 397
Query: 240 MTAEGFV-------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
M A+ + D+V WN++ISGF+Q+ +EAL LF M + PN VT
Sbjct: 398 MYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVT 457
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGL--HIDVFTGSALIDMYSKCGSLKDARTLFEI 344
V + A GS+ IG +HA ++G V G+AL+D Y+KCG + AR +F+
Sbjct: 458 VASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDT 517
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
KN +W+AMIG YGK G S+ELFE ML++ + NE T SVLSACSH G+V +G
Sbjct: 518 IEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEG 577
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
+ F SM + Y S +HY C+VDML R+G + +A D++ ++P+ GAF +GC
Sbjct: 578 KKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCG 637
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
+H R DL + ++ ++ +V++SN+ A+DG W +A+ +R +MK++ + K G
Sbjct: 638 MHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSKIAGH 697
Query: 525 SRVEKR 530
S +E
Sbjct: 698 SIMESE 703
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 228/440 (51%), Gaps = 56/440 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL KC +LRQ H +L N L S+ +KLV +Y G ARLVFD+IP P+
Sbjct: 62 LLSKCTNIDSLRQA---HGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPD 118
Query: 78 VFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
++ W V+ + N + E I ++ L+ + + + FS LKAC + D+ GK++
Sbjct: 119 FYL--WKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKI 176
Query: 136 HAVATQM-GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H ++ F+N V G L+DMY+KCG + S+ +VF + R+VV WTSMI+GY
Sbjct: 177 HCQIVKVPSFDNVVLTG--LLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDL 234
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------------- 223
+E +VLF RM+ + N++TY ++ +
Sbjct: 235 YEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTS 294
Query: 224 ----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
Y + GD + A F+ + DLV W AMI G+ + NEAL LF+ M G
Sbjct: 295 LLDMYVKCGDISNARRVFNEHSH----VDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVG 350
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
IKPN VT+ VL GL G++++GR IH L ++G+ D +AL+ MY+KC +DA+
Sbjct: 351 IKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAK 409
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+FE+ K++ +WN++I + ++G + ++ LF RM E + N VT+ S+ SAC+ G
Sbjct: 410 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLG 469
Query: 400 LVEKGLEIFRSMKERYGVKI 419
+ G S Y VK+
Sbjct: 470 SLAIG-----SSLHAYSVKL 484
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 158/345 (45%), Gaps = 12/345 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
+L C L G+ +H L + ++ + LV +YA C A+ VF+ ++
Sbjct: 361 VLSGCGLVGNLELGRSIHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDI 420
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
N ++ + G+ EA+ F M N T + + AC L + G +HA
Sbjct: 421 VAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAY 480
Query: 139 ATQMGF--ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ ++GF + V VG AL+D Y+KCG SAR +F + E++ ++W++MI GY
Sbjct: 481 SVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTK 540
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAM 255
++ LFE M + +PN+ T+ +++++ + G N +FS M + F P + M
Sbjct: 541 GSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCM 600
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ A++ +AL + + M I+P+ L G+ +G + + + L
Sbjct: 601 VDMLARAGELEQALDIIEKM---PIQPDVRCFGAFLHGCGMHSRFDLGEIV--IKKMLDL 655
Query: 316 HIDVFTGSALI-DMYSKCG---SLKDARTLFEITRIKNVASWNAM 356
H D + L+ ++Y+ G K+ R L + + +A + M
Sbjct: 656 HPDDASYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSKIAGHSIM 700
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 187/568 (32%), Positives = 295/568 (51%), Gaps = 45/568 (7%)
Query: 5 IFPINNLSVNYLDC-----LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYA 58
IF LS DC LL C L +GKQ+H+ L ++ + ++ L+ +Y
Sbjct: 231 IFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYV 290
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI 118
CG + A +F NV + N M++A + ++ F M R N+FT+
Sbjct: 291 KCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPC 350
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+L+ C +I G+Q+H ++ + GFE+D+ V LIDMYSK G L ARR+ + +D
Sbjct: 351 LLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKD 410
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF----------------------- 215
VVSWTSMI+GY EA+ F+ M+L G+ P+
Sbjct: 411 VVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHS 470
Query: 216 ------------TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
+NA++ YAR G S AF+ F + + D +TWN M+SGFAQS
Sbjct: 471 RVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHK----DKITWNGMVSGFAQSG 526
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
EAL++F M +G+K N T + A I+ G++IHA V + G + +
Sbjct: 527 LYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVAN 586
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
ALI +Y KCGS++DA+ F +N SWN +I +HG +++LF++M +EG++
Sbjct: 587 ALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKP 646
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
N+VT I VL+ACSH GLVE+GL F+SM +G+ +HYACVVD+L R+G++ A
Sbjct: 647 NDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKF 706
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ ++P+ + + C +H ++ + E+ +V+LSN A G+W
Sbjct: 707 VEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKW 766
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+++RK+MK++ V+K+PG S +E +N
Sbjct: 767 ACRDHVRKMMKDRGVRKEPGRSWIEVKN 794
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/546 (25%), Positives = 260/546 (47%), Gaps = 46/546 (8%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALL-----CTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
L +L C K+ QG+ VHA + C+ + + + L+ +Y G ++ A VF
Sbjct: 146 LSSVLSACTKAALFEQGRLVHAQVYKQGSCSETV----VGNALIALYLRFGSLSLAERVF 201
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
++P + N ++ A GN + A+ F MR + + T + +L AC + D+
Sbjct: 202 SEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLN 261
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
KGKQ+H+ + G D + +L+D+Y KCG++ A +F +VV W M+ Y
Sbjct: 262 KGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYG 321
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA---------FAFFSRMT 241
+S + ++ LF +M G+ PN+FTY ++ + G+ N F S M
Sbjct: 322 QISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMY 381
Query: 242 AEGFV----------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
G + D+V+W +MI+G+ Q + EAL+ FK M + G
Sbjct: 382 VSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFG 441
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I P+N+ + + A +++ G++IH+ V G DV +AL+++Y++CG K+A
Sbjct: 442 IWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAF 501
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+LFE K+ +WN M+ + + G+ + ++E+F +M + G++ N T +S +SA ++
Sbjct: 502 SLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLA 561
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA-GA 458
+++G +I ++ + G E ++ + + G + +A ++ M N ++
Sbjct: 562 DIKQGKQIHATVI-KTGCTSETEVANALISLYGKCGSIEDAK--MQFFEMSERNHVSWNT 618
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENLRKIM-KEK 516
C+ HG A+ + ++ + GL+ D F+ + C+ G E K M E
Sbjct: 619 IITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEH 678
Query: 517 NVQKQP 522
+ +P
Sbjct: 679 GIHPRP 684
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 200/429 (46%), Gaps = 38/429 (8%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYR 110
L+ +YA G V AR VF+++ + ++W+ M S + N +EA+G + M
Sbjct: 83 LIDLYAKKGLVQRARRVFEQLSARD--NVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVV 140
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ S VL AC ++G+ VHA + G ++ VGNALI +Y + G L A RV
Sbjct: 141 PTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERV 200
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M D V++ ++IS + + A+ +FE M+L G P+ T +++A+ A GD
Sbjct: 201 FSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDL 260
Query: 231 NAAFAFFSRMTAEGFVPD-------------------------------LVTWNAMISGF 259
N S + G PD +V WN M+ +
Sbjct: 261 NKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAY 320
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
Q ++ LF M+ +G++PN T +L+ G I +G +IH L + G D+
Sbjct: 321 GQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDM 380
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+ LIDMYSK G L AR + E+ K+V SW +MI Y +H ++E F+ M
Sbjct: 381 YVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLF 440
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMV 438
G+ + + L S +SAC+ + +G +I R Y +S + +V++ R GR
Sbjct: 441 GIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSI--WNALVNLYARCGRSK 498
Query: 439 EAYDLLRQV 447
EA+ L +
Sbjct: 499 EAFSLFEAI 507
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 172/367 (46%), Gaps = 45/367 (12%)
Query: 116 FSIVLKACVGLLDIKKGKQV---HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
F+ L+ C G +K V HA A G D GN LID+Y+K GL+ ARRVF
Sbjct: 44 FACALRECRG--SVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFE 101
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------- 217
+ RD VSW +M+SGY +EAV L+ +M G+ P +
Sbjct: 102 QLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQ 161
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
NA+IA Y R G + A FS M D VT+N +IS
Sbjct: 162 GRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMP----YCDRVTFNTLIS 217
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
AQ AL++F+ M +SG P+ VT+ +L A G + G+++H+ + + G+
Sbjct: 218 RHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSP 277
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
D +L+D+Y KCG + +A +F+ NV WN M+ YG+ + S +LF +M+
Sbjct: 278 DYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMV 337
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
G+R NE T +L C++ G + G +I + + G + ++DM + G +
Sbjct: 338 AAGVRPNEFTYPCLLRTCTYAGEINLGEQI-HLLSIKTGFESDMYVSGVLIDMYSKYGWL 396
Query: 438 VEAYDLL 444
+A +L
Sbjct: 397 DKARRIL 403
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 296/568 (52%), Gaps = 45/568 (7%)
Query: 5 IFPINNLSVNYLDC-----LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYA 58
IF LS DC LL C L++GKQ+H+ L ++ + + L+ +Y
Sbjct: 232 IFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYV 291
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI 118
CGD+ +A +F+ NV + N M++A + ++ F M+ N+FT+
Sbjct: 292 KCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPC 351
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+L+ C I+ G+Q+H+++ + GFE+D+ V LIDMYSK G L AR++ + +RD
Sbjct: 352 ILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRD 411
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF----------------------- 215
VVSWTSMI+GY +EA+ F+ M+ G+ P+
Sbjct: 412 VVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHA 471
Query: 216 ------------TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
+N ++ YAR G S AF+ F + + D +TWN +ISGF QS+
Sbjct: 472 RVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHK----DEITWNGLISGFGQSR 527
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
+AL +F M +G K N T + A I+ G+++H + G + +
Sbjct: 528 LYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVAN 587
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
ALI +Y KCGS++DA+ +F ++N SWN +I +HG +++LF++M +EG++
Sbjct: 588 ALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKP 647
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
N+VT I VL+ACSH GLVE+GL F+SM YG+ +HYACVVD+L R+G++ A
Sbjct: 648 NDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRF 707
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ ++P+ + + C +H ++ + E+ +V+LSN A G+W
Sbjct: 708 VDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKW 767
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+ +RK+MK++ ++K+PG S +E +N
Sbjct: 768 ANRDQVRKMMKDRGIRKEPGRSWIEVKN 795
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 202/429 (47%), Gaps = 38/429 (8%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYR 110
L+ +YA G V AR VF ++ + + ++W+ M S + +G +EA +S M
Sbjct: 84 LIDLYAKNGLVWQARQVFKELSSRD--HVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVI 141
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ S VL AC +G+ +HA + F ++ VGNALI +Y G A RV
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M D V++ ++ISG+ + A+ +F+ M+L GL P+ T +++A+ A GD
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 231 NAAFAFFSRMTAEGFVPDLVT-------------------------------WNAMISGF 259
S + G D +T WN M+ +
Sbjct: 262 QKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAY 321
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
Q ++ ++F M +GI PN T +L+ TG I++G +IH+L + G D+
Sbjct: 322 GQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDM 381
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+ LIDMYSK G L AR + E+ ++V SW +MI Y +H + ++ F+ M +
Sbjct: 382 YVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDC 441
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMV 438
G+ + + L S SAC+ + +GL+I R Y IS + +V++ R GR
Sbjct: 442 GVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI--WNTLVNLYARCGRSE 499
Query: 439 EAYDLLRQV 447
EA+ L R++
Sbjct: 500 EAFSLFREI 508
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 126/511 (24%), Positives = 233/511 (45%), Gaps = 46/511 (9%)
Query: 16 LDCLLGKCMKSKALRQGKQVHA-----LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
L +L C K K QG+ +HA C+ + + L+ +Y G G A VF
Sbjct: 147 LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF----VGNALIALYLGFGSFKLAERVF 202
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ + N ++ A G+ + A+ F M+ R + T + +L AC + D++
Sbjct: 203 CDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQ 262
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
KGKQ+H+ + G D +L+D+Y KCG + +A +F+ +VV W M+ Y
Sbjct: 263 KGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYG 322
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL- 249
+S + ++ +F +M+ G+ PNQFTY I+ + G S GF D+
Sbjct: 323 QISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMY 382
Query: 250 ------------------------------VTWNAMISGFAQSKRENEALKLFKGMLVSG 279
V+W +MI+G+ Q EAL FK M G
Sbjct: 383 VSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCG 442
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ P+N+ + A +++ G +IHA V G D+ + L+++Y++CG ++A
Sbjct: 443 VWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAF 502
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+LF K+ +WN +I +G+ + ++ +F +M + G + N T IS +SA ++
Sbjct: 503 SLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLA 562
Query: 400 LVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA-G 457
+++G ++ R++K G E ++ + + G + +A + + M + N ++
Sbjct: 563 DIKQGKQVHGRAVKT--GHTSETEVANALISLYGKCGSIEDAKMIFSE--MSLRNEVSWN 618
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
C+ HGR A+ + ++ + GL+ D
Sbjct: 619 TIITSCSQHGRGLEALDLFDQMKQEGLKPND 649
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 165/346 (47%), Gaps = 40/346 (11%)
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
++HA + G D +GN LID+Y+K GL+ AR+VF + RD VSW +M+SGY
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123
Query: 194 KVDEAVVLFERMKLEGLEPNQ-----------------------------------FTYN 218
EA L+ +M + P F N
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+IA Y G +F R+ + D VT+N +ISG AQ AL++F M +S
Sbjct: 184 ALIALYLGFG----SFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLS 239
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G++P+ VTV +L A G +Q G+++H+ + + G+ D T +L+D+Y KCG ++ A
Sbjct: 240 GLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETA 299
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+F + NV WN M+ YG+ + S E+F +M G+ N+ T +L C+
Sbjct: 300 HDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCT 359
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
G +E G +I S+ + G + ++DM + G + +A +L
Sbjct: 360 GQIELGEQI-HSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKIL 404
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 190/565 (33%), Positives = 303/565 (53%), Gaps = 43/565 (7%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYA--GCGDVNSARLVFDKI 73
CLL K + Q KQ+HA + L + FS SK+V A G + ARLVF++I
Sbjct: 43 CLLS-LEKCTTMSQLKQIHAQMLRTCLFVDPFS-ASKIVAFCALHDSGSLPYARLVFNQI 100
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
PNP F N ++ ++AI ++ LM ++FTF + K+C L + GK
Sbjct: 101 PNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GK 157
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H +T++GF +D + N L++MYS CG L SAR+VF M + VVSW +MI Y
Sbjct: 158 QLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWD 217
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA-----------FAFFSRMTA 242
EA+ LF RM++ ++PN+ T ++ + AR D A F + +T+
Sbjct: 218 LPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTS 277
Query: 243 E--------GFVP------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
G P +L WN MI+G + EAL LF M +SG+K
Sbjct: 278 ALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKG 337
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ VT+ +L A G++++G+ +H + + + +DV G+AL+DMY+KCGS++ A +F
Sbjct: 338 DKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVF 397
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ K+V +W A+I G ++ELF M ++ + +T + VL+ACSH GLV
Sbjct: 398 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 457
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G+ F SM +YG++ S EHY C+VDML R+GR+ EA DL++ +PM + +
Sbjct: 458 EGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSA 517
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IHG +A ++ E+ + +V+LSNI ++ W A+ +R++M E+N++K P
Sbjct: 518 CRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPP 577
Query: 523 GFSRVE---KRNEFVEKEVQNESKA 544
G S +E +EFV+ +V + +
Sbjct: 578 GCSAIEVGGVVHEFVKGDVSHPQSS 602
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/520 (34%), Positives = 288/520 (55%), Gaps = 20/520 (3%)
Query: 25 KSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGC-GDVNSARLVFDKIPNPNVFML 81
+ ++LRQ KQVHAL+ + +L+ + G G ARLVFD+IP+P+ FM
Sbjct: 17 RCRSLRQIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDRIPHPDRFMY 76
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCN-------KFTFSIVLKACVGLLDIKKGKQ 134
N ++ +A + ++A+ ++ M C+ K TF VL+AC + + G Q
Sbjct: 77 NTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGETGAQ 136
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VHA + G E+D V NALI M++ G L +A +F G D V+W++MISG+
Sbjct: 137 VHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISGFARRGD 196
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
+ A LF+ ++ L ++N +I +YA+ GD A F D+V+WNA
Sbjct: 197 IGAARELFDESPVKDL----VSWNVMITAYAKLGDMAPARELFDGAPDR----DVVSWNA 248
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MISG+ + +A++LF+ M G KP+ VT+ +L A +G + GR +H +
Sbjct: 249 MISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRF 308
Query: 315 LHIDVFT--GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
I T G+ALIDMY+KCGS+ A +F + + KNV++WN++IG HG SI +
Sbjct: 309 SRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAV 368
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F +ML+ ++ +E+T ++VL+ACSHGG+V+KG E F M++RY ++ + +HY C+VDML
Sbjct: 369 FRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLS 428
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
R G + EA++ + + + + C IHG +LA E + FV+
Sbjct: 429 RGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGDFVL 488
Query: 493 LSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
LSNI A+ GEW +EN+RK+M + V K+ G + ++ ++
Sbjct: 489 LSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVIDSSSK 528
>gi|302791537|ref|XP_002977535.1| hypothetical protein SELMODRAFT_106750 [Selaginella moellendorffii]
gi|300154905|gb|EFJ21539.1| hypothetical protein SELMODRAFT_106750 [Selaginella moellendorffii]
Length = 545
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/507 (35%), Positives = 276/507 (54%), Gaps = 14/507 (2%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LG C L G +H+ + L + + LV +Y CG + SA +F +P +
Sbjct: 17 LGACQDPSRLAAGVGIHSRITEAGLQGDIVISNALVNMYGKCGALESACEIFHGVPRNDA 76
Query: 79 FMLNWMVMASAFTGNF-QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
N M+ A G+ +EA+ F M NK TF +L A G +++G+++H
Sbjct: 77 ISWNGMISLYAQDGHSREEALELFRRMHGEGLTPNKVTFLAILSAVSGARGLEEGRKIHT 136
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER---DVVSWTSMISGYCNVSK 194
+ G+ ++SVGNALIDMYSKCG L AR+ F GM E+ D+V WT+MI+ Y
Sbjct: 137 QVVESGYSGELSVGNALIDMYSKCGSLEDARKTFAGMDEKNKPDLVLWTAMIAAYAGHGD 196
Query: 195 VDEAVVLFERMKLEGLEPNQFTY---NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
EA LF++M+ +GL+P++ NAI+ Y + G+ A F +M D V+
Sbjct: 197 YKEAFELFQQMQDQGLKPDKSLVSIGNAIVHMYGKCGNVADARKMFDKMKER----DTVS 252
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
W MI+ +A+ + EAL++FK ML+ + P+ VT+ VL A + GR ++
Sbjct: 253 WTTMIAVYAEHGYDREALQIFKVMLLESVAPDKVTLINVLDACSNVSGLAQGRLVYKQFV 312
Query: 312 RMGLH-IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
G H +D+ G+A+ M+ CGSL++AR +FE ++V SWN +I Y +HG + S+
Sbjct: 313 ESGAHELDLVLGNAVARMFGSCGSLREAREIFESLAARDVVSWNCLITAYAQHGSFEESL 372
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
LF RMLEE ++ +EVT + VLSACSHGGLV G + F SM + Y + + HY C+VD+
Sbjct: 373 RLFRRMLEECVKPDEVTFVGVLSACSHGGLVADGCQFFVSMVQDYQIPAEEIHYGCMVDL 432
Query: 431 LCRSGRMVEAYDLLRQVPMYVTNS-MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
L R+GR+ EA +LL ++P TN M + + C +H D ++ M P
Sbjct: 433 LGRAGRLAEAEELLSRLPCAATNDVMWTSLLSSCKLHSDLDRGKRAAKKLLAMVPGDPSH 492
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEK 516
+ L+ I AA GEW EA +RK + E+
Sbjct: 493 LLALATIHAASGEWKEAMRIRKEVMER 519
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 128/247 (51%), Gaps = 17/247 (6%)
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
D V+ + + + S++ V + R+ GL+ + NA++ Y + G +A F
Sbjct: 9 DRVALIAALGACQDPSRLAAGVGIHSRITEAGLQGDIVISNALVNMYGKCGALESACEIF 68
Query: 238 SRMTAEGFVP--DLVTWNAMISGFAQS-KRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
VP D ++WN MIS +AQ EAL+LF+ M G+ PN VT +L A
Sbjct: 69 HG------VPRNDAISWNGMISLYAQDGHSREEALELFRRMHGEGLTPNKVTFLAILSAV 122
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN---VA 351
++ GR+IH V G ++ G+ALIDMYSKCGSL+DAR F KN +
Sbjct: 123 SGARGLEEGRKIHTQVVESGYSGELSVGNALIDMYSKCGSLEDARKTFAGMDEKNKPDLV 182
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH----GGLVEKGLEI 407
W AMI Y HG + ELF++M ++G++ ++ +L+S+ +A H G V ++
Sbjct: 183 LWTAMIAAYAGHGDYKEAFELFQQMQDQGLKPDK-SLVSIGNAIVHMYGKCGNVADARKM 241
Query: 408 FRSMKER 414
F MKER
Sbjct: 242 FDKMKER 248
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 18/256 (7%)
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M + G+ P+ V + L A + G IH+ + GL D+ +AL++MY KCG+
Sbjct: 1 MQLQGVAPDRVALIAALGACQDPSRLAAGVGIHSRITEAGLQGDIVISNALVNMYGKCGA 60
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMV-DSSIELFERMLEEGMRANEVTLISVLS 393
L+ A +F + SWN MI Y + G + ++ELF RM EG+ N+VT +++LS
Sbjct: 61 LESACEIFHGVPRNDAISWNGMISLYAQDGHSREEALELFRRMHGEGLTPNKVTFLAILS 120
Query: 394 ACSHGGLVEKGLEIFRSMKER-YGVKISKEHYACVVDMLCRSGRMVEA------YDLLRQ 446
A S +E+G +I + E Y ++S + ++DM + G + +A D +
Sbjct: 121 AVSGARGLEEGRKIHTQVVESGYSGELSVGN--ALIDMYSKCGSLEDARKTFAGMDEKNK 178
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN-ICAADGEWHE 505
+ + +M A+ HG A + ++ + GL+ V + N I G+
Sbjct: 179 PDLVLWTAMIAAYAG----HGDYKEAFELFQQMQDQGLKPDKSLVSIGNAIVHMYGKCGN 234
Query: 506 AENLRKI---MKEKNV 518
+ RK+ MKE++
Sbjct: 235 VADARKMFDKMKERDT 250
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 295/568 (51%), Gaps = 45/568 (7%)
Query: 5 IFPINNLSVNYLDC-----LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYA 58
IF LS DC LL C L++GKQ+H+ L ++ + + L+ +Y
Sbjct: 232 IFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYV 291
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI 118
CGD+ +A +F+ NV + N M++A + ++ F M+ NKFT+
Sbjct: 292 KCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPC 351
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+L+ C I+ G+Q+H+++ + GFE+D+ V LIDMYSK L AR++ + +RD
Sbjct: 352 ILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRD 411
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF----------------------- 215
VVSWTSMI+GY +EA+ F+ M+ G+ P+
Sbjct: 412 VVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHA 471
Query: 216 ------------TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
+N ++ YAR G S AF+ F + + D +TWN +ISGF QS+
Sbjct: 472 RVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHK----DEITWNGLISGFGQSR 527
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
+AL +F M +G K N T + A I+ G+++H + G + +
Sbjct: 528 LYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVAN 587
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
ALI +Y KCGS++DA+ +F ++N SWN +I +HG +++LF++M +EG++
Sbjct: 588 ALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKP 647
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
N+VT I VL+ACSH GLVE+GL F+SM YG+ +HYACVVD+L R+G++ A
Sbjct: 648 NDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRF 707
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ ++P+ + + C +H ++ + E+ +V+LSN A G+W
Sbjct: 708 VDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKW 767
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+ +RK+MK++ ++K+PG S +E +N
Sbjct: 768 ANRDQVRKMMKDRGIRKEPGRSWIEVKN 795
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 200/429 (46%), Gaps = 38/429 (8%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYR 110
L+ +YA G V AR VF ++ + + ++W+ M S + G +EA +S M
Sbjct: 84 LIDLYAKNGLVWQARQVFKELSSRD--HVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVI 141
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ S VL AC +G+ +HA + F ++ VGNALI +Y G A RV
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M D V++ ++ISG+ + A+ +F+ M+L GL P+ T +++A+ A GD
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 231 NAAFAFFSRMTAEGFVPDLVT-------------------------------WNAMISGF 259
S + G D +T WN M+ +
Sbjct: 262 QKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAY 321
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
Q ++ ++F M +GI PN T +L+ TG I++G +IH+L + G D+
Sbjct: 322 GQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDM 381
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+ LIDMYSK L AR + E+ ++V SW +MI Y +H + ++ F+ M +
Sbjct: 382 YVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDC 441
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMV 438
G+ + + L S SAC+ + +GL+I R Y IS + +V++ R GR
Sbjct: 442 GVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI--WNTLVNLYARCGRSE 499
Query: 439 EAYDLLRQV 447
EA+ L R++
Sbjct: 500 EAFSLFREI 508
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 125/511 (24%), Positives = 234/511 (45%), Gaps = 46/511 (9%)
Query: 16 LDCLLGKCMKSKALRQGKQVHA-----LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
L +L C K K QG+ +HA C+ + + L+ +Y G G A VF
Sbjct: 147 LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF----VGNALIALYLGFGSFKLAERVF 202
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ + N ++ A G+ + A+ F M+ R + T + +L AC + D++
Sbjct: 203 CDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQ 262
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
KGKQ+H+ + G D +L+D+Y KCG + +A +F+ +VV W M+ Y
Sbjct: 263 KGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYG 322
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL- 249
+S + ++ +F +M+ G+ PN+FTY I+ + G S GF D+
Sbjct: 323 QISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMY 382
Query: 250 ------------------------------VTWNAMISGFAQSKRENEALKLFKGMLVSG 279
V+W +MI+G+ Q EAL FK M G
Sbjct: 383 VSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCG 442
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ P+N+ + A +++ G +IHA V G D+ + L+++Y++CG ++A
Sbjct: 443 VWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAF 502
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+LF K+ +WN +I +G+ + + ++ +F +M + G + N T IS +SA ++
Sbjct: 503 SLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLA 562
Query: 400 LVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA-G 457
+++G ++ R++K G E ++ + + G + +A + + M + N ++
Sbjct: 563 DIKQGKQVHGRAVKT--GHTSETEVANALISLYGKCGSIEDAKMIFSE--MSLRNEVSWN 618
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
C+ HGR A+ + ++ + GL+ D
Sbjct: 619 TIITSCSQHGRGLEALDLFDQMKQEGLKPND 649
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 149/309 (48%), Gaps = 39/309 (12%)
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
++HA + G D +GN LID+Y+K GL+ AR+VF + RD VSW +M+SGY
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123
Query: 194 KVDEAVVLFERMKLEGLEPNQ-----------------------------------FTYN 218
EA L+ +M + P F N
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+IA Y G +F R+ + D VT+N +ISG AQ AL++F M +S
Sbjct: 184 ALIALYLGFG----SFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLS 239
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G++P+ VTV +L A G +Q G+++H+ + + G+ D T +L+D+Y KCG ++ A
Sbjct: 240 GLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETA 299
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+F + NV WN M+ YG+ + S E+F +M G+ N+ T +L C+
Sbjct: 300 HDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCT 359
Query: 399 GLVEKGLEI 407
G +E G +I
Sbjct: 360 GQIELGEQI 368
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/520 (34%), Positives = 288/520 (55%), Gaps = 20/520 (3%)
Query: 25 KSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGC-GDVNSARLVFDKIPNPNVFML 81
+ ++LRQ KQVHAL+ + +L+ + G G ARLVFD+IP+P+ FM
Sbjct: 17 RCRSLRQIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDRIPHPDRFMY 76
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCN-------KFTFSIVLKACVGLLDIKKGKQ 134
N ++ +A + ++A+ ++ M C+ K TF VL+AC + + G Q
Sbjct: 77 NTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGETGAQ 136
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VHA + G E+D V NALI M++ G L +A +F G D V+W++MISG+
Sbjct: 137 VHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISGFARRGD 196
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
+ A LF+ ++ L ++N +I +YA+ GD A F D+V+WNA
Sbjct: 197 IGAARELFDESPVKDL----VSWNVMITAYAKLGDMAPARELFDGAPDR----DVVSWNA 248
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MISG+ + +A++LF+ M G KP+ VT+ +L A +G + GR +H +
Sbjct: 249 MISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRF 308
Query: 315 LHIDVFT--GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
I T G+ALIDMY+KCGS+ A +F + + KNV++WN++IG HG SI +
Sbjct: 309 SRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAV 368
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F +ML+ ++ +E+T ++VL+ACSHGG+V+KG E F M++RY ++ + +HY C+VDML
Sbjct: 369 FRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLS 428
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
R G + EA++ + + + + C IHG +LA E + FV+
Sbjct: 429 RGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGDFVL 488
Query: 493 LSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
LSNI A+ GEW +EN+RK+M + V K+ G + ++ ++
Sbjct: 489 LSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVIDSSSK 528
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/517 (34%), Positives = 280/517 (54%), Gaps = 43/517 (8%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFI 108
+ L+ YA CG VNSAR FD I + M++W M + + N FQ+++ F+ MR
Sbjct: 80 TALIDAYAVCGSVNSARQAFDAIACKD--MVSWTGMVACYAENDRFQDSLQLFAEMRMVG 137
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ N FTF+ VLKAC+GL GK VH + +E D+ VG L+D+Y+K G
Sbjct: 138 FNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVL 197
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
RVF M + DV+ W+ MIS Y ++ EAV LF +M+ + PNQFT+
Sbjct: 198 RVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIE 257
Query: 218 ------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
NA++ YA+ G + + F + + VTWN
Sbjct: 258 NLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNR----NEVTWN 313
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
MI G+ QS ++AL L+K ML ++ + VT + VL+A ++++G +IH+L +
Sbjct: 314 TMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKT 373
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
DV G+ALIDMY+KCGS+K+AR +F++ ++ SWNAMI Y HG+V +++ F
Sbjct: 374 IYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAF 433
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
+ M E N++T +S+LSACS+ GL++ G F+SM + YG++ EHY C+V +L R
Sbjct: 434 QMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGR 493
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
SG + +A L+ ++P+ + A C IH DL + ++ ++ + V+L
Sbjct: 494 SGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLL 553
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
SNI A W+ ++RK MK K V+K+PG S +E +
Sbjct: 554 SNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQ 590
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 216/433 (49%), Gaps = 51/433 (11%)
Query: 76 PNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P+ ++++ + + +FQ E + FS + + N F F+ +LK V + +
Sbjct: 2 PDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAY 61
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+HA ++G E++ VG ALID Y+ CG + SAR+ F + +D+VSWT M++ Y
Sbjct: 62 SLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEND 121
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------------ 223
+ +++ LF M++ G PN FT+ ++ +
Sbjct: 122 RFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGV 181
Query: 224 -----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
Y + GD+N F M +P W+ MIS +AQS + EA++LF M +
Sbjct: 182 GLLDLYTKFGDANDVLRVFEEMPKHDVIP----WSFMISRYAQSNQSREAVELFGQMRRA 237
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+ PN T VLQ+ ++Q+G+++H V ++GL +VF +AL+D+Y+KCG L ++
Sbjct: 238 FVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNS 297
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
LF +N +WN MI Y + G D ++ L++ MLE ++A+EVT SVL AC+
Sbjct: 298 MKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASL 357
Query: 399 GLVEKGLEIFR-SMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNS 454
+E G +I S+K Y + + ++DM + G + A +D+L + N+
Sbjct: 358 AAMELGTQIHSLSLKTIYDKDVVVGN--ALIDMYAKCGSIKNARLVFDMLSERDEISWNA 415
Query: 455 MAGAFRNGCNIHG 467
M +G ++HG
Sbjct: 416 MI----SGYSMHG 424
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 159/288 (55%), Gaps = 7/288 (2%)
Query: 19 LLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + L+ GKQVH L D N+F + + L+ VYA CG ++++ +F ++PN
Sbjct: 249 VLQSCASIENLQLGKQVHCHVLKVGLDGNVF-VSNALMDVYAKCGRLDNSMKLFMELPNR 307
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N N M++ +G+ +A+ + M E + ++ T+S VL+AC L ++ G Q+H
Sbjct: 308 NEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIH 367
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+++ + ++ DV VGNALIDMY+KCG + +AR VF + ERD +SW +MISGY V
Sbjct: 368 SLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVG 427
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAM 255
EA+ F+ M+ PN+ T+ +I+++ + G + +F M + G P + + M
Sbjct: 428 EALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCM 487
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
+ +S ++A+KL + + ++PN +L A + + +G
Sbjct: 488 VWLLGRSGHLDKAVKLIEEI---PLEPNVKVWRALLGACVIHNDVDLG 532
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 39/258 (15%)
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------- 217
M +R+ VS+ ++I GY ++DE V LF R+ EG E N F +
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 218 -------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
A+I +YA G N+A F + + D+V+W M++
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACK----DMVSWTGMVAC 116
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
+A++ R ++L+LF M + G PN+ T GVL+A + +G+ +H V + +D
Sbjct: 117 YAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMD 176
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
++ G L+D+Y+K G D +FE +V W+ MI Y + ++ELF +M
Sbjct: 177 LYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRR 236
Query: 379 EGMRANEVTLISVLSACS 396
+ N+ T SVL +C+
Sbjct: 237 AFVLPNQFTFASVLQSCA 254
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 281/549 (51%), Gaps = 40/549 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C + +LR+GK +HAL + I L LV +Y+ CG V A VF KI
Sbjct: 54 LSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIR 113
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NP+V + M+ G+ QEA F LMR R N+FT S ++ + D++ G+
Sbjct: 114 NPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQS 173
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + GFE+D V N LI MY K + +VF M D+VSW +++SG+ +
Sbjct: 174 IHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQT 233
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
+F +M LEG +PN FT+ A
Sbjct: 234 CGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTA 293
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YA+ A F R+ D+ +W +ISG+AQ+ + +A+K F+ M G
Sbjct: 294 LVDMYAKARCLEDAGVAFDRLVNR----DIFSWTVIISGYAQTDQAEKAVKYFRQMQREG 349
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
IKPN T+ L +++ GR++HA+ + G D+F GSAL+D+Y KCG ++ A
Sbjct: 350 IKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAE 409
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ +++ SWN +I Y +HG + ++E F ML EG+ +E T I VLSACS G
Sbjct: 410 AIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMG 469
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVE+G + F SM + YG+ S EHYAC+VD+L R+G+ E + ++ + + +
Sbjct: 470 LVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETV 529
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C +HG D ++ FEM +++LSNI A+ G W + N+R +M + ++
Sbjct: 530 LGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIK 589
Query: 520 KQPGFSRVE 528
K+PG S VE
Sbjct: 590 KEPGCSWVE 598
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 208/417 (49%), Gaps = 44/417 (10%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
A +F +P N N ++ A G+ ++ + F M+E + +KFT S VLK C
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
+++GK +HA+A + G E D +G +L+DMYSKCG + A +VF + DVV+W++M
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD---------------- 229
I+G EA LF M+ +G PNQFT ++++++ GD
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183
Query: 230 ------SNAAFAFF--SRMTAEG-------FVPDLVTWNAMISGFAQSKRENEALKLFKG 274
SN + SR +G PDLV+WNA++SGF S+ ++F
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
ML+ G KPN T VL++ + G+++HA + + D F G+AL+DMY+K
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
L+DA F+ +++ SW +I Y + + +++ F +M EG++ NE TL S LS
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHY------ACVVDMLCRSGRMVEAYDLLR 445
CSH +E G ++ + V + H+ + +VD+ + G M A + +
Sbjct: 364 CSHMATLENG-------RQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFK 413
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 185/531 (34%), Positives = 286/531 (53%), Gaps = 24/531 (4%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFD 71
++ D LL C L K +H+ L T L+ ++L+ +Y+ GD++SAR +FD
Sbjct: 26 HFYDHLLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFD 82
Query: 72 K--------IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
PN F+ N M+ A A G EAI + M+ N FT+ VLK C
Sbjct: 83 HRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVC 142
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
L G+ VH + GF +D+ V AL+DMY+KCG + A VF M RDVV WT
Sbjct: 143 ASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWT 202
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA----FFSR 239
+MI+ Y + +A++LF +M+ EG ++ T ++ ++ + GD A + F R
Sbjct: 203 AMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDR 262
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
M + ++WN+M+SG+ Q+ R +AL LF M S PN VT ++ A GS
Sbjct: 263 MEER----NGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGS 318
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI--KNVASWNAMI 357
+GR++H V + ID +A++DMY KCG L A +F + ++V+SWN +I
Sbjct: 319 KHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLI 378
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
YG HG ++ELF RM EG+ N++T S+LSACSH GL+++G + F M + V
Sbjct: 379 SGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMT-KLSV 437
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
+ +HYAC+VDML R+G + EA+ L++++P ++ + GA C IHG +L
Sbjct: 438 RPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAAN 497
Query: 478 EFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
F++ +V++SNI AA +W E E +R+ MK + ++K FS +E
Sbjct: 498 NLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIE 548
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 190/566 (33%), Positives = 298/566 (52%), Gaps = 46/566 (8%)
Query: 7 PINNLSVNYLDC--LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGD 62
P+ + L C LL +K+ +QG+Q+HA + + + N L +KL YAGCG
Sbjct: 51 PLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGL 110
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
++ A ++FD I N F+ N+M+ A G +++ + M F R + FT+ VLKA
Sbjct: 111 MSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKA 170
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C LL ++ G++VH+ G E+D+ VGN+L+ MY+K G + +AR VF M ERD+ SW
Sbjct: 171 CGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSW 230
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------NAIIASYARR 227
+MISGY + A ++F+ M GL + T +I YA R
Sbjct: 231 NTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVR 290
Query: 228 GDSNAAFAFFSRMTAEGFV-----------------PDLVTWNAMISGFAQSKRENEALK 270
FF+ E + D V+WN+MI G+A++ E+L+
Sbjct: 291 NSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLR 350
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
LF+ M + G P+ VT VL A +++ G IH+ + + G + G+AL+DMYS
Sbjct: 351 LFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYS 410
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV---- 386
KCGSL +R +F+ K++ SW+AM+ YG HG +I + +GM+AN V
Sbjct: 411 KCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISIL-----DGMKANSVIPDN 465
Query: 387 -TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
S+LSACSH GLV +G EIF M++ Y VK + HY+C+VD+L R+G + EAY ++R
Sbjct: 466 GVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIR 525
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
+ + T+ + A +H LA ++ F+M + ++ LSNI AA+ W +
Sbjct: 526 TMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDD 585
Query: 506 AENLRKIMKEKNVQKQPGFSRVEKRN 531
E +R +++ K ++K PG S +E N
Sbjct: 586 VERVRAMVRRKGLKKSPGCSFIELDN 611
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 283/511 (55%), Gaps = 8/511 (1%)
Query: 25 KSKALRQGKQVHALLCTN-DLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
K+ ++ K++H+ +C + DL+ SL KL+ YA CG+ S R +FD+IP NV N
Sbjct: 47 KNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFN 106
Query: 83 WMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
M+ + + +A+ F M + +T+ VLKA G D+ G Q+HA ++
Sbjct: 107 VMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRV 166
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G + +V VGN LI MY KCG L A RV M RDVVSW S+++G + D+A+ +
Sbjct: 167 GLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVC 226
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA--FFSRMTAEGFVPDLVTWNAMISGFA 260
+ M+L GL+P+ T +++ + N +F F ++ + LV+WN MI+ +
Sbjct: 227 KEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKS----LVSWNVMIAVYM 282
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
+ EA+ +F M + P+ +++ VL A G ++ +GR IH V R L ++
Sbjct: 283 NNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLL 342
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
+ALIDMY+KCG L+ AR +F+ + ++V SW +MI YG +G ++ LF RM + G
Sbjct: 343 LENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLG 402
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ + + +SVLSACSH GL+++G F+ M E + EH+ C+VD+L R+G++ EA
Sbjct: 403 LNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEA 462
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
Y ++Q+PM + GA + C ++ + + ++ F++ + +V+LSNI A
Sbjct: 463 YGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKA 522
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
G W + +R IMK K ++K PG S E N
Sbjct: 523 GRWEDVTTVRSIMKTKGIKKMPGVSNFELDN 553
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 191/612 (31%), Positives = 302/612 (49%), Gaps = 103/612 (16%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN--IFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C++SK+ +++HA + + IF ++++LV Y CG AR VFD++P
Sbjct: 25 LLDSCVRSKSGIDARRIHARIIKTQFSSEIF-IQNRLVDAYGKCGYFEDARKVFDRMPQR 83
Query: 77 NVFMLN-----------------------------WMVMASAFTGN--FQEAIGYFSLMR 105
N F N W M S F + F+EA+ +F M
Sbjct: 84 NTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMH 143
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
+ N+++F L AC GL D+ G Q+HA+ ++ + DV +G+AL+DMYSKCG++
Sbjct: 144 SEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVA 203
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------- 217
A+R F GM R++VSW S+I+ Y +A+ +F M G+EP++ T
Sbjct: 204 CAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACA 263
Query: 218 ----------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPD- 248
NA++ YA+ N A F RM V +
Sbjct: 264 SWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSET 323
Query: 249 --------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+V+WNA+I+G+ Q+ EA++LF + I P
Sbjct: 324 SMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWP 383
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI------DVFTGSALIDMYSKCGSLK 336
+ T +L A +++GR+ H + + G D+F G++LIDMY KCG ++
Sbjct: 384 THYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVE 443
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
D +FE ++V SWNAMI Y ++G +++E+F +ML G + + VT+I VLSACS
Sbjct: 444 DGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACS 503
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
H GLVE+G F SM+ G+ K+H+ C+VD+L R+G + EA DL++ +PM N +
Sbjct: 504 HAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVW 563
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
G+ C +HG +L + E+ E+ +V+LSN+ A G W + +RK M+++
Sbjct: 564 GSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQR 623
Query: 517 NVQKQPGFSRVE 528
V KQPG S +E
Sbjct: 624 GVIKQPGCSWIE 635
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 169/335 (50%), Gaps = 41/335 (12%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
F+ +L +CV +++HA + F +++ + N L+D Y KCG AR+VF M
Sbjct: 22 FAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMP 81
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
+R N F+YNA+++ + G + AF
Sbjct: 82 QR-----------------------------------NTFSYNAVLSVLTKFGKLDEAFN 106
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA-G 294
F M PD +WNAM+SGFAQ R EAL+ F M N + L A
Sbjct: 107 VFKSMPE----PDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACA 162
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
GLT + +G +IHAL+ + +DV+ GSAL+DMYSKCG + A+ F+ ++N+ SWN
Sbjct: 163 GLT-DLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWN 221
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
++I CY ++G ++E+F M++ G+ +E+TL SV+SAC+ + +GL+I + +R
Sbjct: 222 SLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKR 281
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
+ +VDM + R+ EA + ++P+
Sbjct: 282 DKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 174/366 (47%), Gaps = 52/366 (14%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C A+R+G Q+HA + D N L + LV +YA C VN ARLVFD++
Sbjct: 255 LASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314
Query: 74 PNPNVF-----------------------------MLNWMVMASAFT--GNFQEAIGYFS 102
P NV +++W + + +T G +EA+ F
Sbjct: 315 PLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFL 374
Query: 103 LM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF------ENDVSVGNALI 155
L+ RE I+ + +TF +L AC L D+K G+Q H + GF E+D+ VGN+LI
Sbjct: 375 LLKRESIWPTH-YTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLI 433
Query: 156 DMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF 215
DMY KCG++ VF M ERDVVSW +MI GY A+ +F +M + G +P+
Sbjct: 434 DMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHV 493
Query: 216 TYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
T ++++ + G +F M E G P + M+ ++ +EA L +
Sbjct: 494 TMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQT 553
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI---DMYSK 331
M ++P+NV +L A + G+I++G+ V + ID + +MY++
Sbjct: 554 M---PMQPDNVVWGSLLAACKVHGNIELGK----YVAEKLMEIDPLNSGPYVLLSNMYAE 606
Query: 332 CGSLKD 337
G KD
Sbjct: 607 LGRWKD 612
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 293/548 (53%), Gaps = 46/548 (8%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
L C + + L GK++H L + + L+ +YA CG++ SA VF+ I NV
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNV- 207
Query: 80 MLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ W M + + N +E + F+ MRE N++T+ ++ AC L + +GK H
Sbjct: 208 -VCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHG 266
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ G E + +L+DMY KCG + +ARRVF+ D+V WT+MI GY + V+E
Sbjct: 267 CLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE 326
Query: 198 AVVLFERMKLEGLEPNQFTY----------------------------------NAIIAS 223
A+ LF++MK ++PN T NA++
Sbjct: 327 ALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHM 386
Query: 224 YAR-RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA+ + +A + F M +E D+V WN++ISGF+Q+ +EAL LF M + P
Sbjct: 387 YAKCYQNRDAKYVF--EMESE---KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTP 441
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL--HIDVFTGSALIDMYSKCGSLKDART 340
N VTV + A GS+ +G +HA ++G V G+AL+D Y+KCG + AR
Sbjct: 442 NGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARL 501
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F+ KN +W+AMIG YGK G S+ELFE ML++ + NE T S+LSAC H G+
Sbjct: 502 IFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGM 561
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V +G + F SM + Y S +HY C+VDML R+G + +A D++ ++P+ GAF
Sbjct: 562 VNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFL 621
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+GC +H R DL + ++ ++ +V++SN+ A+DG W++A+ +R +MK++ + K
Sbjct: 622 HGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSK 681
Query: 521 QPGFSRVE 528
G S +E
Sbjct: 682 IAGHSTME 689
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 151/441 (34%), Positives = 228/441 (51%), Gaps = 58/441 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL KC +LRQ H +L N L S+ +KLV +Y G ARLVFD+IP P+
Sbjct: 50 LLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 78 VFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
++ W VM + N + E + + L+ + +R + FS LKAC L D+ GK++
Sbjct: 107 FYL--WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 136 HAVATQM-GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H ++ F+N V G L+DMY+KCG + SA +VF+ + R+VV WTSMI+GY
Sbjct: 165 HCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 222
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------------- 223
+E +VLF RM+ + N++TY +I +
Sbjct: 223 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 282
Query: 224 ----YARRGD-SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
Y + GD SNA R+ E DLV W AMI G+ + NEAL LF+ M
Sbjct: 283 LLDMYVKCGDISNA-----RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV 337
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
IKPN VT+ VL GL ++++GR +H L ++G+ D +AL+ MY+KC +DA
Sbjct: 338 EIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDA 396
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+ +FE+ K++ +WN++I + ++G + ++ LF RM E + N VT+ S+ SAC+
Sbjct: 397 KYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASL 456
Query: 399 GLVEKGLEIFRSMKERYGVKI 419
G + G S Y VK+
Sbjct: 457 GSLAVG-----SSLHAYSVKL 472
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 12/345 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
+L C + L G+ VH L + ++ + LV +YA C A+ VF+ ++
Sbjct: 349 VLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDI 408
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
N ++ + G+ EA+ F M N T + + AC L + G +HA
Sbjct: 409 VAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAY 468
Query: 139 ATQMGF--ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ ++GF + V VG AL+D Y+KCG SAR +F + E++ ++W++MI GY
Sbjct: 469 SVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTI 528
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAM 255
++ LFE M + +PN+ T+ +I+++ G N +FS M + F P + M
Sbjct: 529 GSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCM 588
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ A++ +AL + + M I+P+ L G+ +G + + + L
Sbjct: 589 VDMLARAGELEQALDIIEKM---PIQPDVRCFGAFLHGCGMHSRFDLGEIV--IKKMLDL 643
Query: 316 HIDVFTGSALI-DMYSKCG---SLKDARTLFEITRIKNVASWNAM 356
H D + L+ ++Y+ G K+ R L + + +A + M
Sbjct: 644 HPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688
>gi|15238469|ref|NP_200768.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170472|sp|Q9FGR2.1|PP436_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g59600
gi|10177776|dbj|BAB11040.1| unnamed protein product [Arabidopsis thaliana]
gi|71143062|gb|AAZ23922.1| At5g59600 [Arabidopsis thaliana]
gi|332009827|gb|AED97210.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/474 (35%), Positives = 273/474 (57%), Gaps = 1/474 (0%)
Query: 31 QGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
+G+ +HA L T+ + + + +KLV Y CG V AR VFD++P ++ M+ A A
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
G +QE++ +F M + + + F +LKA LLD + GK +H + + +E+D
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+ ++LIDMYSK G + +AR+VF + E+D+V + +MISGY N S+ DEA+ L + MKL G
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
++P+ T+NA+I+ ++ + M +G+ PD+V+W ++ISG + + +A
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
FK ML G+ PN+ T+ +L A ++ G+EIH GL F SAL+DMY
Sbjct: 274 DAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMY 333
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
KCG + +A LF T K ++N+MI CY HG+ D ++ELF++M G + + +T
Sbjct: 334 GKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFT 393
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
++L+ACSH GL + G +F M+ +Y + EHYAC+VD+L R+G++VEAY++++ + M
Sbjct: 394 AILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRM 453
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ GA C HG +LA + E+ ++L+++ A G W
Sbjct: 454 EPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSW 507
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 187/548 (34%), Positives = 288/548 (52%), Gaps = 34/548 (6%)
Query: 25 KSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+ +L Q KQ+HA + +L+ S + KL+ ++ C + A VF++I +P+V + N
Sbjct: 26 RCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNT 85
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
++ A A F M++ + FT+ +LKAC G + ++ + +HA +MG
Sbjct: 86 LIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMG 145
Query: 144 FENDVSVGNALIDMYSKCGL--LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
F D+ V N+LID Y KCGL + +AR+VF M ERD VSW SMI G V ++ EA L
Sbjct: 146 FCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRL 205
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP-------------- 247
F+ M E + ++N I+ Y + G+ NAAF F +M A V
Sbjct: 206 FDEMP----ERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDM 261
Query: 248 -------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
+LV W MISG+A+ +A+ L+ M +G+K ++ TV +L A
Sbjct: 262 DMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSAC 321
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
++G + +G+ +HA + R +ALIDMY+KCGSL++A ++F K+V SWN
Sbjct: 322 AVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWN 381
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
A+I HG + +++LF RM EG ++VT + VL AC+H G V++GL F +M+
Sbjct: 382 AIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERD 441
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVT 474
YGV EHY C+VD+L R GR+ EA+ L+ +P+ + G C +H LA
Sbjct: 442 YGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEE 501
Query: 475 MGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFV 534
+ + + L MLSNI AA G+W N+R MK ++QK G S +E +E
Sbjct: 502 VFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVH 561
Query: 535 EKEVQNES 542
E V + S
Sbjct: 562 EFTVFDRS 569
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 5/191 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C S L GK+VHA + + + + L+ +YA CG + +A +F + +
Sbjct: 317 ILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKD 376
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ-VH 136
V N ++ A G+ ++A+ FS M+ + +K TF VL AC + +G H
Sbjct: 377 VVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFH 436
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV-SK 194
A+ G +V ++D+ + G L A R+ H M E + + W +++ G C + S
Sbjct: 437 AMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLL-GACRMHSA 495
Query: 195 VDEAVVLFERM 205
A +F+R+
Sbjct: 496 TGLAEEVFDRL 506
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/607 (31%), Positives = 300/607 (49%), Gaps = 90/607 (14%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNS 65
P +L + +L C K+++ G+++H+++ +ND+ + L SKLV +Y CGD+
Sbjct: 95 PKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLRE 154
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM--------------------R 105
R +FDK+ N VF+ N ++ A GNF+E++ F M R
Sbjct: 155 GRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDR 214
Query: 106 EFI--------YRCNKF---------------------TFSIVLKACVGLLDIKKGKQVH 136
+ I Y N T V+ C + G+ +H
Sbjct: 215 DVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALH 274
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + F ++++ N L+DMYSK G L SA +VF M ER VVSWTSMI+GY D
Sbjct: 275 GYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSD 334
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
+V LF M+ EG+ P+ FT NA++
Sbjct: 335 MSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALM 394
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ G A + FS M V D+V+WN MI G++++ NEAL LF M + K
Sbjct: 395 DMYAKCGSMGDAHSVFSEMQ----VKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-K 449
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN++T+ +L A +++ G+EIH + R G +D +AL+DMY KCG+L AR L
Sbjct: 450 PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLL 509
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F++ K++ SW MI YG HG +I F M G+ +EV+ IS+L ACSH GL+
Sbjct: 510 FDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLL 569
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
++G F M+ ++ EHYAC+VD+L R+G + +AY ++ +P+ ++ GA
Sbjct: 570 DEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLC 629
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
GC I+ LA + E FE+ +V+L+NI A +W E + LR+ + + ++K
Sbjct: 630 GCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKN 689
Query: 522 PGFSRVE 528
PG S +E
Sbjct: 690 PGCSWIE 696
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/559 (33%), Positives = 296/559 (52%), Gaps = 47/559 (8%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGC--GDVNSARLV 69
S NYL L C +L ++HAL+ TN L S + + A C ++ AR +
Sbjct: 31 SFNYL---LNCC---SSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKM 84
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
FD++P +VF+ N ++ A G +EA+ +S M + +TF V+++C L +
Sbjct: 85 FDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSAL 144
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
++GK+VH + GF++DV V ++L+ MYS+ G VF M R++VSWT++I+GY
Sbjct: 145 REGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGY 204
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------------- 217
E + +F M G +PN T
Sbjct: 205 VQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDV 264
Query: 218 ---NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
NA+IA Y + G+ A + F M V +LV+WNAMI+ + Q+ A+KLF+
Sbjct: 265 SLTNALIALYGKCGNVETARSLFDGMV----VQNLVSWNAMIAAYEQNNAGANAVKLFRR 320
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M + + +T+ V+ A G++ GR +H LV R GL I+V +ALIDMY+KCG+
Sbjct: 321 MQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGN 380
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
+ AR +FE ++V SW +MIG HG + +++LF RM +EG++ N T +V +A
Sbjct: 381 IDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTA 440
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS 454
C H GLVE+G + F SM Y + EH AC+VD+L R+G ++EAY+ + ++P+ S
Sbjct: 441 CRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVS 500
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMK 514
+ GA C IH +LA + E+ F + + +V++SNI A G W +A LRK+M+
Sbjct: 501 VWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLME 560
Query: 515 EKNVQKQPGFSRVEKRNEF 533
E+ ++K PG S VE F
Sbjct: 561 ERELKKIPGHSLVEVNRRF 579
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/587 (33%), Positives = 315/587 (53%), Gaps = 82/587 (13%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLN--IFSLKSKLVGVYAGCGD---VNSARLVFDK 72
CLL C K+ +QG Q+HA N L+ IFS+ S+L+ ++ G ++ +RL+F +
Sbjct: 14 CLLESC---KSFKQGLQIHAQTIVNGLHHQIFSI-SRLISFFSLLGSKDGLDHSRLLFSQ 69
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
I PN+FM N M+ + + N +EAI Y S++ + I N FTF +L +C L ++
Sbjct: 70 IDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEP 129
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G +VH+ + GFE+D+ V NALI +YS G L AR +F RD+VS+ +MI GY
Sbjct: 130 GHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAE 189
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY---------------------------------- 217
V++ + A+ LF M+ G+ P++FT+
Sbjct: 190 VNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNI 249
Query: 218 ---NAIIASYARRGDSNAAFAFFSRMTAE-----------GFV----------------- 246
+AI+ YA+ G N A FS M G+
Sbjct: 250 LLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHE 309
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
D+++W AMISG++Q+ + +EAL+LFK M GIKP+ VT+ VL A G+ +G+ +
Sbjct: 310 RDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRL 369
Query: 307 HALVCRMGL-HIDVFTGSALIDMYSKCGSLKDARTLFEITRI-KNVAS---WNAMIGCYG 361
+ G+ + + +A++DMY+KCGS+ A +F R+ KN+ + +N+MI
Sbjct: 370 YHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFR--RVGKNMKTGFVFNSMIAGLA 427
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
+HG+ +++I +F ++ G++ +EVT + VL AC H GL+E+G ++F SM YG+K
Sbjct: 428 QHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQM 487
Query: 422 EHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFE 481
EHY C+VD+L R G + EAYDL++++P + + A + C HG + G++ E
Sbjct: 488 EHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLE 547
Query: 482 MGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
M + +V+LSNI A +W EA +RK+M++ ++K PG+S +E
Sbjct: 548 MEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIE 594
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 10/181 (5%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFD 71
L +L C + A GK+++ N +F+ L + ++ +YA CG ++SA +F
Sbjct: 350 LVAVLSACARLGAFDLGKRLYHQYIEN--GVFNQNTILTAAVMDMYAKCGSIDSALEIFR 407
Query: 72 KIPN--PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
++ F+ N M+ A G + AI F + + ++ TF VL AC I
Sbjct: 408 RVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLI 467
Query: 130 KKGKQV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMIS 187
++GK++ ++ G + + ++D+ + G L A + M FE + V W +++S
Sbjct: 468 EEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLS 527
Query: 188 G 188
Sbjct: 528 A 528
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/565 (32%), Positives = 292/565 (51%), Gaps = 43/565 (7%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C S A GK +H +L + + L + L+ +Y CG + A+ VF+ +
Sbjct: 437 LLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARD 496
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V N M+ A G+++ A F M+ + TF+ VL C ++ GKQ+H
Sbjct: 497 VISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHG 556
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
T+ G + DV++GNALI+MY +CG L AR VFH + RDV+SWT+MI G + + +
Sbjct: 557 RITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMK 616
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
A+ LF +M+ EG P + T+ NA+I+
Sbjct: 617 AIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALIS 676
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+Y++ G A F +M + D+V+WN +I+G+AQ+ A++ M + P
Sbjct: 677 AYSKSGSMTDAREVFDKMPSR----DIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVP 732
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N + +L A +++ G+ +HA + + L DV G+ALI MY+KCGS +A+ +F
Sbjct: 733 NKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVF 792
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ KNV +WNAMI Y +HG+ ++ F M +EG++ + T S+LSAC+H GLV
Sbjct: 793 DNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVL 852
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G +IF SM+ YGV + EHY C+V +L R+ R EA L+ Q+P ++
Sbjct: 853 EGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGA 912
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IHG LA ++ R P +++LSN+ AA G W + +R++M+ + ++K+P
Sbjct: 913 CRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEP 972
Query: 523 GFSRVEKRN---EFVEKEVQNESKA 544
G S +E N EF+ + + A
Sbjct: 973 GRSWIEVDNIIHEFIAADRSHPETA 997
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/559 (28%), Positives = 271/559 (48%), Gaps = 61/559 (10%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDV 63
I P +N LD M L +GK++H L LN + + LV + CGDV
Sbjct: 225 ISPDKVTYINLLDAFTTPSM----LDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDV 280
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
+SA+ F + +V + N ++ A A G+ EA + MR N+ T+ +L AC
Sbjct: 281 DSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNAC 340
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
++ GK +H+ ++ G +DV +GNALI MY++CG L AR +F+ M +RD++SW
Sbjct: 341 STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWN 400
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------- 217
++I+GY EA+ L+++M+ EG++P + T+
Sbjct: 401 AIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS 460
Query: 218 ---------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
NA++ Y R G A F A D+++WN+MI+G AQ A
Sbjct: 461 GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR----DVISWNSMIAGHAQHGSYETA 516
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
KLF+ M ++P+N+T VL ++++G++IH + GL +DV G+ALI+M
Sbjct: 517 YKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINM 576
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y +CGSL+DAR +F + ++V SW AMIG G +IELF +M EG R + T
Sbjct: 577 YIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTF 636
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
S+L C+ +++G ++ + G ++ ++ +SG M +A ++ ++P
Sbjct: 637 SSILKVCTSSACLDEGKKVIAYILNS-GYELDTGVGNALISAYSKSGSMTDAREVFDKMP 695
Query: 449 MYVTNS----MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK--PD--GFVMLSNICAAD 500
S +AG +NG L T E ++M + P+ FV L N C++
Sbjct: 696 SRDIVSWNKIIAGYAQNG--------LGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSF 747
Query: 501 GEWHEAENLRKIMKEKNVQ 519
E + + + ++ +Q
Sbjct: 748 SALEEGKRVHAEIVKRKLQ 766
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 229/465 (49%), Gaps = 41/465 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C L GK++H+ + +++ L+ +Y CGD+ AR VF I +
Sbjct: 134 ILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRD 193
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V N M+ A +E +G F M +K T+ +L A + +GK++H
Sbjct: 194 VVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHK 253
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ + G +D+ VG AL+ M +CG + SA++ F G +RDVV + ++I+ E
Sbjct: 254 LTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVE 313
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
A + RM+ +G+ N+ TY NA+I+
Sbjct: 314 AFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALIS 373
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YAR GD A F M DL++WNA+I+G+A+ + EA++L+K M G+KP
Sbjct: 374 MYARCGDLPKARELFYTMPKR----DLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKP 429
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
VT +L A + + G+ IH + R G+ + +AL++MY +CGSL +A+ +F
Sbjct: 430 GRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVF 489
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E T+ ++V SWN+MI + +HG +++ +LF+ M E + + +T SVLS C + +E
Sbjct: 490 EGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALE 549
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
G +I + E G+++ +++M R G + +A ++ +
Sbjct: 550 LGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSL 593
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 232/475 (48%), Gaps = 44/475 (9%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVN 64
P Y+ LL C + + L + K++HA + + +IF L + L+ +Y C V
Sbjct: 22 PTETERATYV-ALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIF-LSNLLINMYVKCRSVL 79
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
A VF ++P +V N ++ A G ++A F M+ + NK T+ +L AC
Sbjct: 80 DAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACY 139
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
+++ GK++H+ + G++ D V N+L+ MY KCG L AR+VF G+ RDVVS+ +
Sbjct: 140 SPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNT 199
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------- 217
M+ Y + V E + LF +M EG+ P++ TY
Sbjct: 200 MLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEG 259
Query: 218 --------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
A++ R GD ++A F + TA+ D+V +NA+I+ AQ EA
Sbjct: 260 LNSDIRVGTALVTMCVRCGDVDSAKQAF-KGTAD---RDVVVYNALIAALAQHGHNVEAF 315
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
+ + M G+ N T +L A + +++ G+ IH+ + G DV G+ALI MY
Sbjct: 316 EQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMY 375
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
++CG L AR LF +++ SWNA+I Y + ++ L+++M EG++ VT +
Sbjct: 376 ARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFL 435
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
+LSAC++ G I + R G+K + +++M R G ++EA ++
Sbjct: 436 HLLSACANSSAYADGKMIHEDIL-RSGIKSNGHLANALMNMYRRCGSLMEAQNVF 489
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 291/553 (52%), Gaps = 41/553 (7%)
Query: 19 LLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C+ S L + VH A+ + ++F + LV +Y+ CG + ARL+FD +
Sbjct: 189 VLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF-VSGALVNIYSKCGRMRDARLLFDWMRER 247
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV--GLLDIKKGKQ 134
+V + N M+ G +EA FS R ++F+ ++L C+ G D++ GKQ
Sbjct: 248 DVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQ 307
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH +A + G ++DVSV N+L++MYSK G AR VF+ M D++SW SMIS S
Sbjct: 308 VHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSL 367
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG-------------DSNAAFAFFSR-- 239
+E+V LF + EGL+P+ FT +I + A + ++A A F
Sbjct: 368 EEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDL 427
Query: 240 ---------------MTAEGFV------PDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
M G V PD V W +MISG + E++AL+++ M S
Sbjct: 428 HVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQS 487
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+ P+ T +++A +++ GR++HA V ++ D F G++L+DMY+KCG+++DA
Sbjct: 488 RVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDA 547
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
LF+ ++N+A WNAM+ +HG + ++ LF+ M G+ + V+ I +LSACSH
Sbjct: 548 YRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHA 607
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GL + E SM YG++ EHY+C+VD L R+G + EA ++ +P + S+ A
Sbjct: 608 GLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRA 667
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C I G + + F + +V+LSNI AA W + + RK+MK KNV
Sbjct: 668 LLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNV 727
Query: 519 QKQPGFSRVEKRN 531
+K PGFS ++ +N
Sbjct: 728 KKDPGFSWIDVKN 740
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 153/552 (27%), Positives = 259/552 (46%), Gaps = 65/552 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LLGKC ++ + G L N L+ +Y+ CG ++SAR VFD P ++
Sbjct: 94 LLGKCTHARIVVSGSAGDHFLSNN----------LLTMYSKCGSLSSARQVFDTTPERDL 143
Query: 79 FMLNWMVMASAFT-----GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
N ++ A A + GN QE + F L+R + + T + VLK C+ + +
Sbjct: 144 VTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAE 203
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH A ++G E DV V AL+++YSKCG + AR +F M ERDVV W M+ GY +
Sbjct: 204 GVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLG 263
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG-------------------DSNAAF 234
EA LF GL P++F+ I+ G DS+ +
Sbjct: 264 LEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSV 323
Query: 235 A-----FFSRMTAEGFVP---------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
A +S+M F DL++WN+MIS AQS E E++ LF +L G+
Sbjct: 324 ANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGL 383
Query: 281 KPNNVTVTGVL-----QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
KP++ T+ + +A G + G++IHA + G D+ S ++DMY KCG +
Sbjct: 384 KPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDM 443
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+A +F + +W +MI +G D ++ ++ RM + + +E T +++ A
Sbjct: 444 VNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKAS 503
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHY--ACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
S +E+G ++ ++ + + + + +VDM + G + +AY L ++ M V N
Sbjct: 504 SCVTALEQGRQLHANVIK---LDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKK--MNVRN 558
Query: 454 -SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEA-ENL 509
++ A G HG + AV + + G+ +PD F+ + + C+ G EA E L
Sbjct: 559 IALWNAMLVGLAQHGNAEEAVNLFKSMKSHGI-EPDRVSFIGILSACSHAGLTSEAYEYL 617
Query: 510 RKIMKEKNVQKQ 521
+ + ++ +
Sbjct: 618 HSMPNDYGIEPE 629
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/537 (33%), Positives = 293/537 (54%), Gaps = 34/537 (6%)
Query: 29 LRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
LR+G+++H ++ TN N+F++ + +V +YA C + A +F+++P ++ N +V
Sbjct: 158 LRRGREIHGMVITNGFQSNLFAM-TAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVA 216
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
A G + A+ M+E + + T VL A L ++ G+ +H A + GFE
Sbjct: 217 GYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEY 276
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
V+V A++D Y KCG + SAR VF GM R+VVSW +MI GY + +EA F +M
Sbjct: 277 MVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKML 336
Query: 207 LEGLEPNQFTYNAIIASYARRGD----------------------SNAAFAFFSR----- 239
EG+EP + + + A GD N+ + +S+
Sbjct: 337 DEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVD 396
Query: 240 MTAEGF----VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
+ A F +VTWNAMI G+AQ+ NEAL LF M IKP++ T+ V+ A
Sbjct: 397 IAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALA 456
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
+ + IH L R + +VF +ALID ++KCG+++ AR LF++ + ++V +WNA
Sbjct: 457 DLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNA 516
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
MI YG +G +++LF M ++ NE+T +SV++ACSH GLVE+G+ F SMKE Y
Sbjct: 517 MIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENY 576
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTM 475
G++ + +HY +VD+L R+GR+ +A+ ++ +P+ ++ GA C IH +L
Sbjct: 577 GLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKT 636
Query: 476 GEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+E F++ V+L+N+ A+ W + +R M++K +QK PG S VE RNE
Sbjct: 637 ADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNE 693
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 259/538 (48%), Gaps = 69/538 (12%)
Query: 28 ALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
+L++ Q+ L+ N N ++KL+ ++ + A VF+ + + + + M+
Sbjct: 56 SLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLK 115
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNK-----FTFSIVLKACVGLLDIKKGKQVHAVATQ 141
A ++A+ ++ MR C++ + F+ +L+ LD+++G+++H +
Sbjct: 116 GYAKNSTLRDAVRFYERMR-----CDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVIT 170
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
GF++++ A++++Y+KC + A ++F M +RD+VSW ++++GY AV +
Sbjct: 171 NGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQV 230
Query: 202 FERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAF-------------------- 236
+M+ G +P+ T +++ + A R G S +AF
Sbjct: 231 VLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFK 290
Query: 237 -----FSRMTAEGFVP-DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+R+ +G ++V+WN MI G+AQ+ EA F ML G++P NV++ G
Sbjct: 291 CGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGA 350
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A G ++ GR +H L+ + DV ++LI MYSKC + A ++F + K V
Sbjct: 351 LHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTV 410
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+WNAMI Y ++G V+ ++ LF M ++ + TL+SV++A + L + R
Sbjct: 411 VTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALA-------DLSVTRQ 463
Query: 411 MKERYGVKI----SKEHYAC--VVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRN 461
K +G+ I K + C ++D + G + A +DL+++ + N+M +
Sbjct: 464 AKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGY-- 521
Query: 462 GCNIHGRRDLAVTMGEEFFEM--GLRKPDGFVMLSNI--CAADGEWHEAENLRKIMKE 515
G N HGR L + F EM G KP+ LS I C+ G E + MKE
Sbjct: 522 GTNGHGREALDL-----FNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKE 574
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 142/288 (49%), Gaps = 5/288 (1%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C L +G+ VH LL + S+ + L+ +Y+ C V+ A VF + + V
Sbjct: 351 LHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTV 410
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
N M++ A G EA+ F M+ + + FT V+ A L ++ K +H +
Sbjct: 411 VTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGL 470
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
A + + +V V ALID ++KCG + +AR++F M ER V++W +MI GY EA
Sbjct: 471 AIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREA 530
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMIS 257
+ LF M+ ++PN+ T+ ++IA+ + G +F M G P + + AM+
Sbjct: 531 LDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVD 590
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
++ R ++A K + M V KP + +L A + ++++G +
Sbjct: 591 LLGRAGRLDDAWKFIQDMPV---KPGITVLGAMLGACRIHKNVELGEK 635
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
L S++ +I L+ + G + + + LI ++ K S+ +A +FE K ++
Sbjct: 53 LCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHT 112
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
M+ Y K+ + ++ +ERM + + +L + +G EI M
Sbjct: 113 MLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREI-HGMVITN 171
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS----MAGAFRNGCNIHGRRDL 471
G + + VV++ + ++ +AY + ++P S +AG +NG RR +
Sbjct: 172 GFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNG---FARRAV 228
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICA 498
V + + E G +KPD ++S + A
Sbjct: 229 QVVL--QMQEAG-QKPDSITLVSVLPA 252
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 289/522 (55%), Gaps = 25/522 (4%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARL 68
N ++N L L +K+ A++ VH + + F+L S V+A
Sbjct: 145 NCSTINELHGLCASMIKTNAIQDCFLVHQFISAS----FALNSVHYPVFA---------- 190
Query: 69 VFDKIPNPNVFMLNWMVMASAFTG-NFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
F ++ NPNVF+ N M+ + G F+ Y ++ E +TFS ++KAC +
Sbjct: 191 -FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMC 249
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
++ G+ VH + GFE+ + V AL+D YSK +L AR+VF M ERD +WT+M+S
Sbjct: 250 AVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVS 309
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
V +D A LFE M E N T+N +I YAR G+ +A F++M +
Sbjct: 310 ALARVGDMDSARKLFEEMP----ERNTATWNTMIDGYARLGNVESAELLFNQMPTK---- 361
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
D+++W MI+ ++Q+K+ +AL ++ M ++GI P+ VT++ V A G++++G+EIH
Sbjct: 362 DIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIH 421
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
V GL++DV+ GSAL+DMY+KCGSL + +F KN+ WNA+I HG +
Sbjct: 422 HYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAE 481
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
++ +F M E + N VT IS+LSAC+H GLV++G F SM Y ++ HY C+
Sbjct: 482 KALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCM 541
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
VDML +SG + EA +L++ + + + GA NGC +HG ++A E+ +
Sbjct: 542 VDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNS 601
Query: 488 DGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ-PGFSRVE 528
+ +L ++ A + +W E ++R +MKEK V+K+ PG S +E
Sbjct: 602 GHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIE 643
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 289/546 (52%), Gaps = 32/546 (5%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C AL G++VH + L N ++ + L+ +YA CG V AR VFD + + +
Sbjct: 151 ILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRD 210
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ A A +G QE++ + M + R ++ T+ VL AC L ++KGKQ+HA
Sbjct: 211 EVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHA 270
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ +DV V AL MY KCG + AR VF + RDV++W +MI G + +++E
Sbjct: 271 QIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEE 330
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL-------- 249
A +F RM E + P++ TY AI+++ AR G +R +G V D+
Sbjct: 331 AHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALIN 390
Query: 250 -----------------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
V+W A++ G+A + E+ FK ML G++ N +T
Sbjct: 391 MYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKIT 450
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
VL+A +++ G+EIHA V + G+ D+ +AL+ MY KCGS++DA + E
Sbjct: 451 YMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMS 510
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
++V +WN +IG ++G +++ FE M E MR N T ++V+SAC LVE+G
Sbjct: 511 TRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRR 570
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F SM++ YG+ +++HYAC+VD+L R+G + EA D++ +P + +M GA C H
Sbjct: 571 QFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAH 630
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
G ++ E+ ++ + +V LS I AA G W + LRK+MKE+ V+K+PG S
Sbjct: 631 GNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSW 690
Query: 527 VEKRNE 532
+E E
Sbjct: 691 IEVAGE 696
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 220/429 (51%), Gaps = 35/429 (8%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLV 69
S +Y+ LL C+K+K L GKQVH + + N++ + + L+ +Y CG VN AR +
Sbjct: 44 SYDYVK-LLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINT-LLKLYVHCGSVNEARRL 101
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
FDK N +V N M+ A G QEA F+LM++ +KFTF +L AC +
Sbjct: 102 FDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAAL 161
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
G++VH + G N+ +VGNALI MY+KCG + ARRVF M RD VSWT++ Y
Sbjct: 162 NWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAY 221
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------NAIIASYARRGDS 230
E++ + M EG+ P++ TY +A I D
Sbjct: 222 AESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDV 281
Query: 231 NAAFAFFSRMTAEGFVP------------DLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+ A G V D++ WN MI G S + EA +F ML
Sbjct: 282 RVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKE 341
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+ P+ VT +L A G + G+EIHA + GL DV G+ALI+MYSK GS+KDA
Sbjct: 342 CVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDA 401
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
R +F+ ++V SW A++G Y G V S F++ML++G+ AN++T + VL ACS+
Sbjct: 402 RQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNP 461
Query: 399 GLVEKGLEI 407
++ G EI
Sbjct: 462 VALKWGKEI 470
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 191/375 (50%), Gaps = 42/375 (11%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
+ + + + +L++CV D+ GKQVH + G + +V + N L+ +Y CG + ARR
Sbjct: 41 QVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARR 100
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------ 217
+F + VVSW MISGY + EA LF M+ EGLEP++FT+
Sbjct: 101 LFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAA 160
Query: 218 -----------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
NA+I+ YA+ G A F M + D V+W
Sbjct: 161 LNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR----DEVSWTT 216
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
+ +A+S E+LK + ML G++P+ +T VL A G +++ G++IHA +
Sbjct: 217 LTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESE 276
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
H DV +AL MY KCG++KDAR +FE ++V +WN MIG G ++ + +F
Sbjct: 277 HHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFH 336
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCR 433
RML+E + + VT +++LSAC+ G + G EI R++K+ G+ +++M +
Sbjct: 337 RMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKD--GLVSDVRFGNALINMYSK 394
Query: 434 SGRMVEAYDLLRQVP 448
+G M +A + ++P
Sbjct: 395 AGSMKDARQVFDRMP 409
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 127/299 (42%), Gaps = 47/299 (15%)
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
+ + + +G + + + Y ++ S + D + G P++ N ++ +
Sbjct: 31 VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYV 90
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTG------------------------------- 289
NEA +LF + NV ++G
Sbjct: 91 HCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVS 150
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
+L A ++ GRE+H V GL + G+ALI MY+KCGS++DAR +F+ ++
Sbjct: 151 ILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRD 210
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
SW + G Y + G S++ + ML+EG+R + +T ++VLSAC +EKG +I
Sbjct: 211 EVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHA 270
Query: 410 SMKERYGVKISKEHYACV------VDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAF 459
+ + EH++ V M + G + +A ++ +P + N+M G
Sbjct: 271 QI-------VESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGL 322
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFD 71
+ Y+ C+L C AL+ GK++HA + + ++ + L+ +Y CG V A V +
Sbjct: 449 ITYM-CVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSE 507
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+ +V N ++ A G EA+ F +M+ R N TF V+ AC +++
Sbjct: 508 GMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEE 567
Query: 132 G-KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISG 188
G +Q ++ G ++D+ ++ G L A V M F+ W ++++
Sbjct: 568 GRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAA 626
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 184/553 (33%), Positives = 290/553 (52%), Gaps = 37/553 (6%)
Query: 15 YLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKI 73
+L+ LL +++++L+ Q+H + N+ L + L+ +YA CG +N A L+F
Sbjct: 144 HLNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSIT 203
Query: 74 PNPNVFMLNW---MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ ++ W + S F + Q A+ F+ MR N+FTFS +L A + +
Sbjct: 204 HHHFKTIVTWTSLITHLSHFNMHLQ-ALSLFNQMRCSGPYPNQFTFSSILSASAATMMVL 262
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
G+Q+H++ + GF+ ++ VG AL+DMY+KC + SA RVF M ER++VSW SMI G+
Sbjct: 263 HGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFF 322
Query: 191 NVSKVDEAVVLFER-MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP-- 247
+ + D AV +F+ ++ + + PN+ + ++++++ A G N + G VP
Sbjct: 323 HNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLT 382
Query: 248 -----------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
D+VTWN ++ GF Q+ + EA F M
Sbjct: 383 YVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRRE 442
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
GI P+ + + VL + ++ G IH + ++G ++ +LI MY+KCGSL DA
Sbjct: 443 GILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDA 502
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+FE NV SW AMI Y HG + IELFE ML EG+ + VT + VLSACSH
Sbjct: 503 YQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHT 562
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
G VE+GL F SMK+ + + EHYAC+VD+L R+G + EA + +PM T S+ GA
Sbjct: 563 GRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGA 622
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C +G + E FEM P +V+L+N+C G EA +R++M V
Sbjct: 623 LLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGV 682
Query: 519 QKQPGFSRVEKRN 531
+K+PG S ++ +N
Sbjct: 683 RKEPGCSWIDVKN 695
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 283/511 (55%), Gaps = 8/511 (1%)
Query: 25 KSKALRQGKQVHALLCTN-DLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
K+ ++ K++H+ +C + DL+ SL KL+ YA CG+ S R +FD+IP NV N
Sbjct: 1036 KNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFN 1095
Query: 83 WMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
M+ + + +A+ F M + +T+ VLKA G D+ G Q+HA ++
Sbjct: 1096 VMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRV 1155
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G + +V VGN LI MY KCG L A RV M RDVVSW S+++G + D+A+ +
Sbjct: 1156 GLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVC 1215
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA--FFSRMTAEGFVPDLVTWNAMISGFA 260
+ M+L GL+P+ T +++ + N +F F ++ + LV+WN MI+ +
Sbjct: 1216 KEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKS----LVSWNVMIAVYM 1271
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
+ EA+ +F M + P+ +++ VL A G ++ +GR IH V R L ++
Sbjct: 1272 NNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLL 1331
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
+ALIDMY+KCG L+ AR +F+ + ++V SW +MI YG +G ++ LF RM + G
Sbjct: 1332 LENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLG 1391
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ + + +SVLSACSH GL+++G F+ M E + EH+ C+VD+L R+G++ EA
Sbjct: 1392 LNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEA 1451
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
Y ++Q+PM + GA + C ++ + + ++ F++ + +V+LSNI A
Sbjct: 1452 YGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKA 1511
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
G W + +R IMK K ++K PG S E N
Sbjct: 1512 GRWEDVTTVRSIMKTKGIKKMPGVSNFELDN 1542
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 179/562 (31%), Positives = 303/562 (53%), Gaps = 41/562 (7%)
Query: 8 INNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSA 66
+ +LS + +L C++++ L+QG +H+ + N + L +KL+ Y G+ +A
Sbjct: 32 LTHLSSSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINA 91
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
R VFD++P NV + A G++Q+A+ FS M R N+FT+ VL+AC GL
Sbjct: 92 RKVFDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGL 151
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
+++G Q+H + F ++ V +AL+D++SKCG + AR +F M ERDVVSW ++I
Sbjct: 152 RCLERGMQIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVI 211
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAI-------------------------- 220
GY D++ +F M EG+ P+ FT ++
Sbjct: 212 GGYAAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFG 271
Query: 221 ---------IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS-KRENEALK 270
I +YA+ +A A + M + D++++ A+++G+A+ EAL
Sbjct: 272 SHIDLNGSLIDAYAKSEGMKSASALYKSMLKK----DVISFTAIMTGYARKCSYSREALD 327
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
LFK M ++ ++VT +L S+ IGR+IHAL + DV TG+AL+DMY+
Sbjct: 328 LFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYA 387
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
K G ++DA F + KNV SW ++I YGKHG +I L+++M EG++ N++T +S
Sbjct: 388 KSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLS 447
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY 450
+L ACSH GL +G E F +M +Y + EHY+C++D+ R G++ EAY+++ ++ +
Sbjct: 448 LLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIK 507
Query: 451 VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR 510
+S+ GA C+I+G L M +V+L+ I AA G W +A +R
Sbjct: 508 PNSSLWGAILGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMR 567
Query: 511 KIMKEKNVQKQPGFSRVEKRNE 532
+M+ ++++K PG+S ++ N+
Sbjct: 568 NLMEYRSLKKIPGYSIIQSTNK 589
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 286/542 (52%), Gaps = 32/542 (5%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C L G+++H + L N ++ + L+ +YA CG V AR VFD + + +
Sbjct: 135 ILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRD 194
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ A A +G +E++ + M + R ++ T+ VL AC L ++KGKQ+HA
Sbjct: 195 EVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHA 254
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ + +DV V AL MY KCG AR VF + RDV++W +MI G+ + +++E
Sbjct: 255 HIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEE 314
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL-------- 249
A F RM EG+ P++ TY ++++ AR G +R +G V D+
Sbjct: 315 AHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALIN 374
Query: 250 -----------------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
V+W ++ +A + E+ FK ML G+K N +T
Sbjct: 375 MYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKIT 434
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
VL+A +++ G+EIHA V + GL D+ +AL+ MY KCGS++DA +FE
Sbjct: 435 YMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMS 494
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+++V +WN +IG G++G +++ +E M EGMR N T ++VLSAC LVE+G
Sbjct: 495 MRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRR 554
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F M + YG+ +++HYAC+VD+L R+G + EA D++ +P+ + +M GA C IH
Sbjct: 555 QFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIH 614
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
++ E ++ + +V LS I AA G W + LRK MKE+ V+K+PG S
Sbjct: 615 CNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSW 674
Query: 527 VE 528
+E
Sbjct: 675 IE 676
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 222/433 (51%), Gaps = 43/433 (9%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
S +Y+ LL C+K+K L GKQVH L C N++ + + L+ +YA CG VN AR +
Sbjct: 28 SYDYVK-LLQSCVKAKDLAVGKQVHEHILRCGVKPNVY-ITNTLLKLYAHCGSVNEARQL 85
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
FDK N +V N M+ A G QEA F+LM++ +KFTF +L AC +
Sbjct: 86 FDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVL 145
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
G+++H + G ND +VGNALI MY+KCG + ARRVF M RD VSWT++ Y
Sbjct: 146 NWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAY 205
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------------- 217
+E++ + M E + P++ TY
Sbjct: 206 AESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDV 265
Query: 218 ---NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
A+ Y + G A F ++ D++ WN MI GF S + EA F
Sbjct: 266 RVSTALTKMYMKCGAFKDAREVFECLSYR----DVIAWNTMIRGFVDSGQLEEAHGTFHR 321
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
ML G+ P+ T T VL A G + G+EIHA + GL DV G+ALI+MYSK GS
Sbjct: 322 MLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGS 381
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
+KDAR +F+ ++V SW ++G Y V S F++ML++G++AN++T + VL A
Sbjct: 382 MKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKA 441
Query: 395 CSHGGLVEKGLEI 407
CS+ ++ G EI
Sbjct: 442 CSNPVALKWGKEI 454
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 186/373 (49%), Gaps = 42/373 (11%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+ + + +L++CV D+ GKQVH + G + +V + N L+ +Y+ CG + AR++F
Sbjct: 27 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLF 86
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------- 217
+ VVSW MISGY + EA LF M+ E LEP++FT+
Sbjct: 87 DKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLN 146
Query: 218 ---------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
NA+I+ YA+ G A F M + D V+W +
Sbjct: 147 WGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR----DEVSWTTLT 202
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+A+S E+LK + ML ++P+ +T VL A G +++ G++IHA + H
Sbjct: 203 GAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYH 262
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
DV +AL MY KCG+ KDAR +FE ++V +WN MI + G ++ + F RM
Sbjct: 263 SDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRM 322
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSG 435
LEEG+ + T +VLSAC+ G + +G EI R+ K+ G+ +++M ++G
Sbjct: 323 LEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKD--GLVSDVRFGNALINMYSKAG 380
Query: 436 RMVEAYDLLRQVP 448
M +A + ++P
Sbjct: 381 SMKDARQVFDRMP 393
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
+ + + +G + + + Y ++ S + D + G P++ N ++ +A
Sbjct: 15 VLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYA 74
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTG------------------------------- 289
NEA +LF + NV ++G
Sbjct: 75 HCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVS 134
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
+L A + GREIH V GL D G+ALI MY+KCGS++DAR +F+ ++
Sbjct: 135 ILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRD 194
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
SW + G Y + G + S++ + ML+E +R + +T ++VLSAC +EKG +I
Sbjct: 195 EVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHA 254
Query: 410 SMKE 413
+ E
Sbjct: 255 HIVE 258
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 11/222 (4%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
+ Y+ C+L C AL+ GK++HA ++ L ++ + L+ +Y CG V A VF+
Sbjct: 433 ITYM-CVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFE 491
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+ +V N ++ G EA+ + +M+ R N TF VL AC +++
Sbjct: 492 GMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEE 551
Query: 132 GKQVHA-VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISG- 188
G++ A ++ G ++D+ ++ G L A V + + W ++++
Sbjct: 552 GRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAAC 611
Query: 189 --YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
+CNV + A +KLE N Y ++ A YA G
Sbjct: 612 RIHCNVEIGERAAE--HCLKLE--PQNAGLYVSLSAIYAAAG 649
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 161/463 (34%), Positives = 268/463 (57%), Gaps = 8/463 (1%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
A +F +IPNPN +M N ++ A A + + A+ F M +K+TF+ LK+C
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGS 120
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
+++G+Q+H + G +D+ + N LI +Y+ CG + AR + M ERDVVSW ++
Sbjct: 121 FSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNAL 180
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
+S Y ++ A LF+ M E N ++N +I+ Y G A R+ E
Sbjct: 181 LSAYAERGLMELACHLFDEMT----ERNVESWNFMISGYVGVGLLEEA----RRVFGETP 232
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
V ++V+WNAMI+G++ + R +E L LF+ M +G+KP+N T+ VL A G++ G
Sbjct: 233 VKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEW 292
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+HA + + G+ ID F +AL+DMYSKCGS++ A +F K++++WN++I HG
Sbjct: 293 VHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGS 352
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
++++F ML EG + NEVT + VLSACS GL+++G E+F M +G++ + EHY
Sbjct: 353 GQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYG 412
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
C+VD+L R G + EA +L++++P + + + C HG +LA + ++ E+ +
Sbjct: 413 CMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQ 472
Query: 486 KPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ FV LSN+ A+ G W + +R+ M+ + V+K PG S +E
Sbjct: 473 ESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIE 515
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 174/394 (44%), Gaps = 75/394 (19%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C + +G+Q+H + L ++F +++ L+ +YA CG + AR + D++ +
Sbjct: 115 LKSCGSFSGVEEGRQIHGHVLKTGLGDDLF-IQNTLIHLYASCGCIEDARHLLDRMLERD 173
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V N ++ A A G + A F M
Sbjct: 174 VVSWNALLSAYAERGLMELACHLFDEMT-------------------------------- 201
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
E +V N +I Y GLL ARRVF ++VVSW +MI+GY + + E
Sbjct: 202 -------ERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSE 254
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYAR-----RGDSNAAFAFFSRMTAEGFVP----- 247
+VLFE M+ G++P+ T +++++ A +G+ A+ + ++ +GFV
Sbjct: 255 VLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVD 314
Query: 248 ---------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
D+ TWN++ISG + AL++F MLV G KPN VT
Sbjct: 315 MYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVT 374
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRM-GLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
VL A G + GRE+ L+ + G+ + ++D+ + G L++A L +
Sbjct: 375 FVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKM 434
Query: 346 RIKNVA-SWNAMIGCYGKHGMVDSSIELFERMLE 378
K + W +++G HG V+ + + +++LE
Sbjct: 435 PQKEASVVWESLLGACRNHGNVELAERVAQKLLE 468
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 136/299 (45%), Gaps = 5/299 (1%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
++ Y G G + AR VF + P NV N M+ + G F E + F M+ + +
Sbjct: 211 MISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPD 270
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
T VL AC + + +G+ VHA + G D V AL+DMYSKCG + A VF+
Sbjct: 271 NCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFN 330
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
+D+ +W S+ISG A+ +F M +EG +PN+ T+ ++++ +R G +
Sbjct: 331 SCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDE 390
Query: 233 AFAFFSRMT-AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
F+ M G P + + M+ + EA +L + M K +V +L
Sbjct: 391 GREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKM---PQKEASVVWESLL 447
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
A G++++ + + + + + L +MY+ G KD + + R + V
Sbjct: 448 GACRNHGNVELAERVAQKLLELSPQ-ESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGV 505
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 14/241 (5%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C AL QG+ VHA + N ++I + + LV +Y+ CG + A VF+
Sbjct: 274 LVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCL 333
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKG 132
++ N ++ + G+ Q A+ FS M ++ N+ TF VL AC GLLD +G
Sbjct: 334 RKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLD--EG 391
Query: 133 KQVHAVATQM-GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV-VSWTSMISGYC 190
+++ + + G + + ++D+ + GLL A + M +++ V W S++
Sbjct: 392 REMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACR 451
Query: 191 NVSKVDEAVVLFERM--KLEGLEPNQFTYNAIIAS-YARRGDSNAAFAFFSRMTAEGFVP 247
N V+ L ER+ KL L P + + +++ YA G +M A+G
Sbjct: 452 NHGNVE----LAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRK 507
Query: 248 D 248
D
Sbjct: 508 D 508
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 183/554 (33%), Positives = 291/554 (52%), Gaps = 44/554 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVF-DKIPNP 76
L C + L +GKQ+H+L+ T + + L+ +Y+ CG + A LVF D
Sbjct: 17 FLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHER 76
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NVF N ++ G + ++ MR +K+TF V++ C ++++KK +H
Sbjct: 77 NVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVKK---IH 133
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+MG E DV VG+AL++ Y K G + A++VF + RDVV W +MI+GY + +D
Sbjct: 134 GCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLD 193
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------SNAAF 234
EA+ +F RM ++G+ P++FT I++ +A RGD SNA
Sbjct: 194 EALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALI 253
Query: 235 AFFSRMTAEGFV---------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ + G D+ +WN++IS Q + L+LF ML SGI P+ V
Sbjct: 254 DMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLV 313
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHID--------VFTGSALIDMYSKCGSLKD 337
T+T VL A ++ GREIH + GL D + +A++DMY+KCGS+ +
Sbjct: 314 TITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNN 373
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A +F+ K+VASWN MI YG HG ++ +F +M E + NEVTL+ VLSAC+H
Sbjct: 374 ALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNH 433
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
G V G M+ +GV + EHY CV+DML R+G + +AY++++++P+ +
Sbjct: 434 AGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWR 493
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
A C +HG +LA + ++ +V++SN+ G + E +RK MKE+N
Sbjct: 494 ALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQN 553
Query: 518 VQKQPGFSRVEKRN 531
V+K PG S +E ++
Sbjct: 554 VKKTPGCSWIELKD 567
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 291/553 (52%), Gaps = 48/553 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLC----TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
LL C A +GKQ+H+ + ++DL I + L+ +Y C D+ +A F
Sbjct: 320 LLSACASVGAGYKGKQLHSYVIKMGMSSDLII---EGSLLDLYVKCFDIETAHEYFLTTE 376
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NV + N M++A GN E+ F M+ N++T+ +L+ C L + G+Q
Sbjct: 377 TENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQ 436
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + GF+ +V V + LIDMY+K G L +AR + + E DVVSWT+MI+GY
Sbjct: 437 IHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDL 496
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
EA+ LF+ M+ +G+ + + NA
Sbjct: 497 FAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNA 556
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+++ YAR G + A+ F ++ A+ D ++WNA+ISGFAQS EAL++F M +G
Sbjct: 557 LVSLYARCGRAQDAYLAFEKIDAK----DNISWNALISGFAQSGHCEEALQVFSQMNQAG 612
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA- 338
++ N T + A T +I+ G++IHA++ + G + + LI +YSKCGS++DA
Sbjct: 613 VEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAK 672
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
R FE+ KNV SWNAMI Y +HG ++ LFE M + G+ N VT + VLSACSH
Sbjct: 673 REFFEMPE-KNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHV 731
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLV +GL FRSM + +G+ EHY CVVD+L R+ + A + + ++P+ +
Sbjct: 732 GLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRT 791
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
+ C +H ++ E+ +V+LSN+ A G+W + R++MK++ V
Sbjct: 792 LLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGV 851
Query: 519 QKQPGFSRVEKRN 531
+K+PG S +E +N
Sbjct: 852 KKEPGRSWIEVKN 864
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 155/521 (29%), Positives = 253/521 (48%), Gaps = 50/521 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C S +L K++HA + + + L S+L+ +Y G+V++A +FD IP+ N
Sbjct: 16 LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSN 75
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV-GLLDIKKGKQVH 136
V N ++ + +G FSLM ++ TF+ VL+AC G + +Q+H
Sbjct: 76 VSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIH 135
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A GF + V N LID+YSK G + A+ VF +F +D VSW +MISG + D
Sbjct: 136 AKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGRED 195
Query: 197 EAVVLFERM--------------------KLE---------------GLEPNQFTYNAII 221
EA++LF +M K+E GL F NA++
Sbjct: 196 EAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALV 255
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y+R G+ AA FS+M D +++N++ISG AQ + AL+LF+ M + +K
Sbjct: 256 TLYSRWGNLIAAEQIFSKMHRR----DRISYNSLISGLAQRGFSDRALQLFEKMQLDCMK 311
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ VTV +L A G+ G+++H+ V +MG+ D+ +L+D+Y KC ++ A
Sbjct: 312 PDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEY 371
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F T +NV WN M+ YG+ G + S +F +M EG+ N+ T S+L C+ G +
Sbjct: 372 FLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGAL 431
Query: 402 EKGLEIF-RSMKERYGVKISKEHYAC--VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
+ G +I + +K + + Y C ++DM + G + A +L+++ S A
Sbjct: 432 DLGEQIHTQVIKSGFQFNV----YVCSVLIDMYAKHGELDTARGILQRLREEDVVSWT-A 486
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICA 498
G H A+ + +E G+R + GF + CA
Sbjct: 487 MIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACA 527
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 259/543 (47%), Gaps = 46/543 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C K + + G+Q+H + L+ + + LV +Y+ G++ +A +F K+ +
Sbjct: 219 VLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRD 278
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
N ++ A G A+ F M+ + + T + +L AC + KGKQ+H+
Sbjct: 279 RISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHS 338
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+MG +D+ + +L+D+Y KC + +A F +VV W M+ Y + + E
Sbjct: 339 YVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSE 398
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIAS---------------------------------- 223
+ +F +M++EGL PNQ+TY +I+ +
Sbjct: 399 SYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLID 458
Query: 224 -YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA+ G+ + A R+ E D+V+W AMI+G+ Q EALKLF+ M GI+
Sbjct: 459 MYAKHGELDTARGILQRLREE----DVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRS 514
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+N+ + + A ++ G++IHA G D+ G+AL+ +Y++CG +DA F
Sbjct: 515 DNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAF 574
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E K+ SWNA+I + + G + ++++F +M + G+ AN T S +SA ++ ++
Sbjct: 575 EKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIK 634
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G +I +M + G E ++ + + G + +A ++P S A G
Sbjct: 635 QGKQI-HAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSW-NAMITG 692
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEA-ENLRKIMKEKNVQ 519
+ HG AV++ EE ++GL P+ FV + + C+ G +E R + KE +
Sbjct: 693 YSQHGYGSEAVSLFEEMKQLGLM-PNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLV 751
Query: 520 KQP 522
+P
Sbjct: 752 PKP 754
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 222/459 (48%), Gaps = 40/459 (8%)
Query: 19 LLGKCMKSKALRQ-GKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C KA Q +Q+HA + + L + L+ +Y+ G V+ A+LVF+++
Sbjct: 117 VLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLK 176
Query: 77 NVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ ++W+ M S + G EAI F M + + FS VL AC + K G+Q
Sbjct: 177 D--SVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQ 234
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + G ++ V NAL+ +YS+ G L +A ++F M RD +S+ S+ISG
Sbjct: 235 LHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGF 294
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL----- 249
D A+ LFE+M+L+ ++P+ T +++++ A G S + G DL
Sbjct: 295 SDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGS 354
Query: 250 --------------------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
V WN M+ + Q +E+ +F M + G+ PN
Sbjct: 355 LLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPN 414
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
T +L+ G++ +G +IH V + G +V+ S LIDMY+K G L AR + +
Sbjct: 415 QYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQ 474
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
R ++V SW AMI Y +H + +++LF+ M +G+R++ + S +SAC+ + +
Sbjct: 475 RLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQ 534
Query: 404 GLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
G +I +S Y +S + +V + R GR +AY
Sbjct: 535 GQQIHAQSYISGYSEDLSIGN--ALVSLYARCGRAQDAY 571
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 7/200 (3%)
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
GI+ N T + + +GS+ +++HA + + G + GS LID+Y G + +A
Sbjct: 5 GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
LF+ NV+ WN +I + + LF M+ E + +E T SVL ACS G
Sbjct: 65 IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGG 124
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV--PMYVTNSMA 456
+ E + +G S ++D+ ++G + DL + V +++ +S++
Sbjct: 125 KAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHV----DLAKLVFERLFLKDSVS 180
Query: 457 G-AFRNGCNIHGRRDLAVTM 475
A +G + +GR D A+ +
Sbjct: 181 WVAMISGLSQNGREDEAILL 200
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 185/558 (33%), Positives = 287/558 (51%), Gaps = 47/558 (8%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFD 71
++ D LL C L K +H+ L T L+ ++L+ +Y+ GD++SAR +FD
Sbjct: 26 HFYDHLLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFD 82
Query: 72 K--------IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
PN F+ N M+ A A G EAI + M+ N FT+ VLK C
Sbjct: 83 HRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVC 142
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
L G+ VH + GF +D+ V AL+DMY+KCG + A VF M RDVV WT
Sbjct: 143 ASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWT 202
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE 243
+MI+ Y + +A++LF +M+ EG ++ T ++ ++ + GD A +
Sbjct: 203 AMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLN 262
Query: 244 GFVPDL-------------------------------VTWNAMISGFAQSKRENEALKLF 272
GF+ D+ ++WN+M+SG+ Q+ R +AL LF
Sbjct: 263 GFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLF 322
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
M S PN VT ++ A GS +GR++H V + ID +A++DMY KC
Sbjct: 323 NQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKC 382
Query: 333 GSLKDARTLFEITRI--KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
G L A +F + ++V+SWN +I YG HG ++ELF RM EG+ N++T S
Sbjct: 383 GDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTS 442
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY 450
+LSACSH GL+++G + F M + V+ +HYAC+VDML R+G + EA+ L++++P
Sbjct: 443 ILSACSHAGLIDEGRKCFADMT-KLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSR 501
Query: 451 VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR 510
++ + GA C IHG +L F++ +V++SNI AA +W E E +R
Sbjct: 502 PSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVR 561
Query: 511 KIMKEKNVQKQPGFSRVE 528
+ MK + ++K FS +E
Sbjct: 562 QNMKSRGLKKPAAFSVIE 579
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 182/557 (32%), Positives = 296/557 (53%), Gaps = 44/557 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L+ +C+ +AL K +HA + + L+ L + L+ YA G ++ A +F + NV
Sbjct: 10 LIKQCVTLEAL---KSLHASILKSHLHP-HLCTSLIAQYASLGSISHAYALFSTSHSSNV 65
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
F+ N ++ A + T + + ++ +S M + + FTF +LKAC L D + G + HA
Sbjct: 66 FLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARAHAH 125
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
G+E+DV V N+L+ MY + G +R+VF M ER+VVSW+SM+ Y + + +E
Sbjct: 126 VVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRYEEG 185
Query: 199 VVLFERMKLEGLEPN--------------------------------QFTYNAIIASYAR 226
++LF RM EG+ PN Q NA + YAR
Sbjct: 186 LLLFWRMLNEGIAPNRGSIVNAMACIHREHEADDFCRVVIDNGLDSDQSVQNAAMGMYAR 245
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G + A FF + + DLV W +MI + Q+ AL+LFK M + GI P++VT
Sbjct: 246 CGRIDVARRFFYGILDK----DLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVT 301
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ ++ A S Q+ R +H ++ R + +A+ID+Y KCG+L+ AR F+
Sbjct: 302 LLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRMS 361
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+N+ SW+ MI YG HG ++ LF++M + ++ + + + VLSACSHGGL+ +G E
Sbjct: 362 ARNLISWSTMISGYGMHGHGREALCLFDQM-KASIKPDHIAFVMVLSACSHGGLIAEGWE 420
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F++M +GV EHYAC+VD+L R+GR+ EA + ++P+ + GA C IH
Sbjct: 421 CFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGACRIH 480
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
+ A T F + P +++LSNI A+ G+ EA+++R +MK + V+K G +
Sbjct: 481 SNLETAETAARHLFNLDAENPGRYILLSNIYASSGKRKEADDIRALMKSRGVRKTVGHTI 540
Query: 527 VEKRNE---FVEKEVQN 540
+E +N+ FV + N
Sbjct: 541 IEIKNKVYTFVAGDTSN 557
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 299/526 (56%), Gaps = 19/526 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN-----DLNIFSLKSKLVGVYAGCGDVNSARLVFDK- 72
LL +C ++RQ ++ A + + D NI ++K +GV + G++ + L+F+
Sbjct: 27 LLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVK--FIGVSSSHGNLRHSVLIFNHF 84
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFS--LMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ PN+F N ++ A + + I YF+ L+ +++TF+ VLKAC GL +
Sbjct: 85 LSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVL 144
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
+G++VH T+ G E+++ V N+L+D+Y K G C A+++F M RDVVSW ++ISGYC
Sbjct: 145 EGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYC 204
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV 250
VD+A ++F+ M +E N +++ +I+ YAR G+ A F M + ++V
Sbjct: 205 FSGMVDKARMVFDGM----MEKNLVSWSTMISGYARVGNLEEARQLFENMP----MRNVV 256
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
+WNAMI+G+AQ+++ +A++LF+ M G + PN+VT+ VL A G++ +G+ IH
Sbjct: 257 SWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRF 316
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
+ R + + +F G+AL DMY+KCG + +A+ +F ++V SW+ +I +G + +
Sbjct: 317 IRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEA 376
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
F M+E+G+ N+++ + +L+AC+H GLV+KGLE F M + YG+ EHY CVVD
Sbjct: 377 FNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVD 436
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
+L R+GR+ +A L+ +PM + GA GC I+ + + E+
Sbjct: 437 LLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGS 496
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
V L+N+ A+ G +A + R M++ K PG S +E N E
Sbjct: 497 LVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYE 542
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 288/544 (52%), Gaps = 42/544 (7%)
Query: 33 KQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT 91
K+VHA + +L N + KL+ ++ C +N A VF++I +PNV + N ++ A
Sbjct: 40 KEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQN 99
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
+A F M++ + FT+ +LKAC G + + +H + GF D+ V
Sbjct: 100 SQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVP 159
Query: 152 NALIDMYSKCGL---------------------------------LCSARRVFHGMFERD 178
N+LID YSKCGL L AR++F M ERD
Sbjct: 160 NSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERD 219
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
VSW +++ GY ++ +A LFE+M E N +++ +++ Y + GD A F
Sbjct: 220 AVSWNTILDGYVKAGEMSQAFNLFEKMP----ERNVVSWSTMVSGYCKTGDMEMARMLFD 275
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
+M + +LVTW +ISGFA+ EA L+ M +G+KP++ T+ +L A +G
Sbjct: 276 KMPFK----NLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESG 331
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
+ +G+++HA + ++ + V +AL+DMY+KCG + A ++F ++++ SWN M+
Sbjct: 332 LLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQ 391
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
HG + +I+LF +M +EG + ++VTLI++L AC+H G V++GL F SM+ +G+
Sbjct: 392 GLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIV 451
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEE 478
EHY C++D+L R GR+ EA+ L++ +PM + + G C +H LA + +
Sbjct: 452 PHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDR 511
Query: 479 FFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEV 538
+ P + MLSNI AA G+W+ N+R MK VQK G S +E +E E V
Sbjct: 512 LITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTV 571
Query: 539 QNES 542
++S
Sbjct: 572 FDKS 575
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 182/408 (44%), Gaps = 52/408 (12%)
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D K+VHA + ND+ V LI +S C + A VF+ + + +V + ++I
Sbjct: 35 DFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIR 94
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------------ 217
+ S+ +A F M+ GL + FTY
Sbjct: 95 AHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFG 154
Query: 218 -----NAIIASYARRG--DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
N++I SY++ G N A F M + DLV+WN+MI G ++ A K
Sbjct: 155 DLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEK----DLVSWNSMIGGLVKAGDLGRARK 210
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
LF M N + G ++AG ++ + + ++ +V + S ++ Y
Sbjct: 211 LFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPER--------NVVSWSTMVSGYC 262
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
K G ++ AR LF+ KN+ +W +I + + G+ + L+ +M G++ ++ TLIS
Sbjct: 263 KTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLIS 322
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY 450
+L+AC+ GL+ G ++ S+K + +K S +VDM + GR+ +A + ++ M
Sbjct: 323 ILAACAESGLLVLGKKVHASIK-KIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMR 381
Query: 451 VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
S G +HG + A+ + + + G KPD +++ +CA
Sbjct: 382 DLVSW-NCMLQGLAMHGHGEKAIQLFSKMQQEGF-KPDKVTLIAILCA 427
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 14/234 (5%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C +S L GK+VHA + + ++ + LV +YA CG V+ A +F+++ +
Sbjct: 323 ILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRD 382
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQVH 136
+ N M+ A G+ ++AI FS M++ ++ +K T +L AC + +G +
Sbjct: 383 LVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFN 442
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKV 195
++ G + +ID+ + G L A R+ M E + V W +++ G C +V
Sbjct: 443 SMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLL-GAC---RV 498
Query: 196 DEAVVLFER-----MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEG 244
AV L E+ + LE +P ++ + I +A GD N+ +M + G
Sbjct: 499 HNAVPLAEKVLDRLITLEQSDPGNYSMLSNI--FAAAGDWNSVANMRLQMKSTG 550
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 274/505 (54%), Gaps = 49/505 (9%)
Query: 69 VFDK-IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
+F+K + NVF N ++ A +G+ EA+ FS MR+ + N+ TF +K+C LL
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D+ G+Q H A GFE D+ V +AL+DMYSKCG L AR +F + R++VSWTSMI+
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226
Query: 188 GYCNVSKVDEAVVLFERMKLE--------------------------------------- 208
GY A++LF+ +E
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF 286
Query: 209 ----GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
G E + N ++ +YA+ G+ + F M D+++WN++I+ +AQ+
Sbjct: 287 LIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAER----DVISWNSIIAVYAQNGM 342
Query: 265 ENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
E++++F M+ G I N VT++ VL A +GS ++G+ IH V +MGL +VF G+
Sbjct: 343 STESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGT 402
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
++IDMY KCG ++ AR F+ R KNV SW+AM+ YG HG ++E+F M G++
Sbjct: 403 SIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKP 462
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
N +T +SVL+ACSH GL+E+G F++M + V+ EHY C+VD+L R+G + EA+DL
Sbjct: 463 NYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDL 522
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
++ + + + GA C +H DL + FE+ + +V+LSNI A G W
Sbjct: 523 IKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRW 582
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVE 528
+ E +R +MK + K PGFS V+
Sbjct: 583 EDVERMRILMKNSGLVKPPGFSLVD 607
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 192/428 (44%), Gaps = 73/428 (17%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAG 59
NR FP C + C L G+Q H AL+ + ++F + S LV +Y+
Sbjct: 151 NRSTFP----------CAIKSCSALLDLHSGRQAHQQALIFGFEPDLF-VSSALVDMYSK 199
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR--------- 110
CG++ AR +FD+I + N+ ++W M + + N +A L +EF+
Sbjct: 200 CGELRDARTLFDEISHRNI--VSWTSMITGYVQN-DDAHRALLLFKEFLVEESGSEGDGE 256
Query: 111 --CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ VL AC + + + VH + GFE D+ V N L+D Y+KCG L +R
Sbjct: 257 VCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSR 316
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE-------------------- 208
RVF GM ERDV+SW S+I+ Y E++ +F RM +
Sbjct: 317 RVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHS 376
Query: 209 ----------------GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
GLE N F +II Y + G A F RM + ++ +W
Sbjct: 377 GSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK----NVKSW 432
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE-IHALVC 311
+AM++G+ EAL++F M ++G+KPN +T VL A G ++ G A+
Sbjct: 433 SAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSH 492
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVD--- 367
+ V ++D+ + G LK+A L + +++ + W A++G H VD
Sbjct: 493 EFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGE 552
Query: 368 -SSIELFE 374
S+ +LFE
Sbjct: 553 ISARKLFE 560
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/560 (33%), Positives = 293/560 (52%), Gaps = 49/560 (8%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSA 66
P + N+ L KC + A R+ T+D N+FS + L+ YA V A
Sbjct: 40 PTSTYLSNHFLLLYSKCRRLSAARR-----VFDHTHDCNVFSFNT-LISAYAKESYVEVA 93
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--- 123
+FD++P P+ N ++ A A G+ Q A F MRE + FT S ++ AC
Sbjct: 94 HQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGIN 153
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE-RDVVSW 182
VGL+ +Q+HA++ G ++ VSVGNALI YSK G L ARR+FH + E RD VSW
Sbjct: 154 VGLI-----RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSW 208
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA 242
SM+ Y + +A+ L+ M + GL + FT +++ ++ D F +++
Sbjct: 209 NSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIK 268
Query: 243 EGFV--------------------------------PDLVTWNAMISGFA-QSKRENEAL 269
G+ PDLV WN MISG++ +EAL
Sbjct: 269 SGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEAL 328
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID-VFTGSALIDM 328
+ F+ + V G +P++ ++ V+ A S GR++H L ++ + + + +ALI M
Sbjct: 329 ECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAM 388
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
YSKCG+L+DA+TLF+ N S+N+MI Y +HGM S+ LF+RMLE G +T
Sbjct: 389 YSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITF 448
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
ISVL+AC+H G VE G F MK+++G++ H++C++D+L R+G++ EA L+ +P
Sbjct: 449 ISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIP 508
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
A C IHG +LA+ ++ +VML+NI + +G +A +
Sbjct: 509 FDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAAS 568
Query: 509 LRKIMKEKNVQKQPGFSRVE 528
+RK+M+++ V+K+PG S +E
Sbjct: 569 VRKLMRDRGVKKKPGCSWIE 588
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 208/475 (43%), Gaps = 85/475 (17%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
F LK C+ D++ GK +HA+ + + N + +YSKC L +ARRVF
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
+ +V S+ ++IS Y S V+ A LF+ M +P+ +YN +IA+YARRGD+ AF
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAFQ 126
Query: 236 FFSRM-----TAEGF------------------------VPDLVTW----NAMISGFAQS 262
F M +GF V L ++ NA+I+ ++++
Sbjct: 127 LFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKN 186
Query: 263 KRENEALKLFKG--------------------------------MLVSGIKPNNVTVTGV 290
EA ++F M V G+ + T+ V
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASV 246
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS-LKDARTLFEITRIKN 349
L A + G + HA + + G H + GS LID+YSKCG + D R +F+ +
Sbjct: 247 LTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPD 306
Query: 350 VASWNAMIGCYGKH-GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+ WN MI Y + + D ++E F ++ G R ++ +L+ V+SACS+ +G ++
Sbjct: 307 LVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV- 365
Query: 409 RSMKERYGV---KISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT---NSMAGAFRNG 462
+ + + +IS + ++ M + G + +A L +P + T NSM +
Sbjct: 366 HGLALKLDIPSNRISVNN--ALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQ- 422
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENLRKIMKEK 516
HG ++ + + EMG + F+ + CA G + + +MK+K
Sbjct: 423 ---HGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQK 474
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 177/367 (48%), Gaps = 23/367 (6%)
Query: 32 GKQVHALLCTNDLNIFS-LKSKLVGVYAGCGD-VNSARLVFDKIPNPNVFMLNWMVMASA 89
G Q HA L + + S + S L+ +Y+ CG + R VFD+I NP++ + N M+ +
Sbjct: 259 GLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYS 318
Query: 90 FTGNF-QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF-END 147
+ EA+ F ++ +R + + V+ AC + +G+QVH +A ++ N
Sbjct: 319 LYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNR 378
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
+SV NALI MYSKCG L A+ +F M E + VS+ SMI+GY +++ LF+RM
Sbjct: 379 ISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLE 438
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKREN 266
G P T+ +++A+ A G +F+ M + G P+ ++ MI ++ + +
Sbjct: 439 MGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLS 498
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA-- 324
EA +L + + P + +L A + G++++ + L +D +
Sbjct: 499 EAERLIETI---PFDPGFFFWSALLGACRIHGNVELAIK----AANRLLQLDPLNAAPYV 551
Query: 325 -LIDMYSKCGSLKDARTLFEITRIKNV-----ASW---NAMIGCYGKHGMVDSSIELFER 375
L ++YS G L+DA ++ ++ R + V SW N I + I+ +
Sbjct: 552 MLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQE 611
Query: 376 MLEEGMR 382
LEE MR
Sbjct: 612 YLEEMMR 618
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 288/522 (55%), Gaps = 25/522 (4%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARL 68
N ++N L L +K+ A++ VH + + F+L S V+A
Sbjct: 48 NCSTINELHGLCASMIKTNAIQDCFLVHQFISAS----FALNSVHYPVFA---------- 93
Query: 69 VFDKIPNPNVFMLNWMVMASAFTG-NFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
F ++ NPNVF+ N M+ + G F+ Y ++ E +TFS ++KAC +
Sbjct: 94 -FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMC 152
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
++ G+ VH + GFE+ + V AL+D YSK +L AR+VF M ERD +WT+M+S
Sbjct: 153 AVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLS 212
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
V +D A LFE M E N T+N +I Y R G+ +A F++M +
Sbjct: 213 ALARVGDMDSARKLFEEMP----ERNTATWNTMIDGYTRLGNVESAELLFNQMPTK---- 264
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
D+++W MI+ ++Q+K+ +AL ++ M ++GI P+ VT++ V A G++++G+EIH
Sbjct: 265 DIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIH 324
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
V GL++DV+ GSAL+DMY+KCGSL + +F KN+ WNA+I HG +
Sbjct: 325 HYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAE 384
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
++ +F M E + N VT IS+LSAC+H GLV++G F SM Y ++ HY C+
Sbjct: 385 KALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCM 444
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
VDML +SG + EA +L++ + + + GA NGC +HG ++A E+ +
Sbjct: 445 VDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNS 504
Query: 488 DGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ-PGFSRVE 528
+ +L ++ A + +W E ++R +MKEK V+K+ PG S +E
Sbjct: 505 GHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIE 546
>gi|297738048|emb|CBI27249.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 198/628 (31%), Positives = 316/628 (50%), Gaps = 104/628 (16%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAG 59
++R I I ++S N LLG C +LR+ +HALL + L+ L ++KLV +Y
Sbjct: 74 IDRTIASIQSISSNPCFSLLGICKTVSSLRK---IHALLVVHGLSEDLLCETKLVSLYGS 130
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSL-MREFIYRCNKFTFSI 118
G V ARL+FD+I NP+++ M+ ++ E + +++ +R+ + + FSI
Sbjct: 131 FGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSI 190
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
VLKAC L + +G+++H ++G D V L+DMY+KC + +RRVF + +R+
Sbjct: 191 VLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRN 249
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS--------------- 223
VV WTSMI GY + E +VLF RM+ +E NQ+T +++ +
Sbjct: 250 VVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHG 309
Query: 224 --------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
Y + GD AF+ F ++ DLV+W AMI G+AQ
Sbjct: 310 YVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELST----IDLVSWTAMIVGYAQRG 365
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
EALKLF + PN VT + VL A TGS+ +GR +H L ++G F +
Sbjct: 366 YPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATFE-N 424
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
AL+DMY+KC + DAR +FE K+V +WN++I Y ++G ++ELF++M + +
Sbjct: 425 ALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYP 484
Query: 384 NEVTLISVLSACS-----------HG---------------------------------- 398
+ +TL+SVLSAC+ HG
Sbjct: 485 DAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGRDCSRSLELFGDMLKEKLEPNEVI 544
Query: 399 -----------GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
G++ +G F +M + Y S +HYAC+VD+L R+GR+ EA D + ++
Sbjct: 545 FTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKI 604
Query: 448 PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAE 507
P+ S+ GAF +GC +H R DL E+ K +V++SN+ A++G W +A
Sbjct: 605 PIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQAN 664
Query: 508 NLRKIMKEKNVQKQPGFSRV--EKRNEF 533
+ ++MK++ + K PG+S V E N+F
Sbjct: 665 QVMELMKQRGLAKLPGWSLVDIETSNDF 692
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 283/548 (51%), Gaps = 32/548 (5%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L L C + ++ G+ +H D +N + S LV +Y G V+ +VF ++P
Sbjct: 71 LSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMP 130
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NV ++ G +EA+ YFS M C+ +TFS LKAC + G++
Sbjct: 131 LRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGRE 190
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + GF V N L MY+KCG L R+F M +RDVVSWT++I + +
Sbjct: 191 IHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQ 250
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYA----------------RRG--DS----NA 232
+ AV F RM+ + PN+FT+ A+I+ A RRG DS N+
Sbjct: 251 EENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANS 310
Query: 233 AFAFFSRMTAEGFVP---------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
A +S+ D+++W+ MISG+AQ EA M G +PN
Sbjct: 311 IMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPN 370
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
VL G ++ G+++HA V +GL + SALI+MYSKCGS+K+A +F+
Sbjct: 371 EFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFD 430
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
N+ SW AMI Y +HG +I+LF+++ + G+R + VT I+VL+ACSH GLV+
Sbjct: 431 EAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDL 490
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
G F S+ + + + SK+HY C++D+LCR+GR+ +A +++ +P + + C
Sbjct: 491 GFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRAC 550
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
IHG D E+ ++ + L+N+ AA G+W EA +RK+MK K V K+PG
Sbjct: 551 RIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPG 610
Query: 524 FSRVEKRN 531
+S ++ ++
Sbjct: 611 WSWIKFKD 618
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 218/472 (46%), Gaps = 39/472 (8%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTG--NFQEAIGYFSLMR-EFIYRCNKFTFS 117
G +N+AR +FDK+ + ++W + S + N EA+ FS M E + F S
Sbjct: 15 GHLNNARQLFDKMLQRD--EISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILS 72
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
+ LKAC + + G+ +H + + F N V VG+AL+DMY K G + VF M R
Sbjct: 73 LALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLR 132
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
+VVSWT++I+G EA+ F M ++ + + +T+++ + + A G N
Sbjct: 133 NVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIH 192
Query: 238 SRMTAEGFVP-------------------------------DLVTWNAMISGFAQSKREN 266
+ +GF D+V+W +I Q +E
Sbjct: 193 CQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEE 252
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
A+K F+ M + + PN T V+ G I+ G ++HA V R GL + ++++
Sbjct: 253 NAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIM 312
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
MYSKC L A T+F+ +++ SW+ MI Y + G + + + M EG R NE
Sbjct: 313 AMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEF 372
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
SVLS C + ++E+G ++ + G++ + + +++M + G + EA + +
Sbjct: 373 AFASVLSVCGNMAILEQGKQLHAHVL-CVGLEQNTMVQSALINMYSKCGSIKEASKIFDE 431
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
Y A NG HG A+ + ++ ++GLR PD ++ + A
Sbjct: 432 AE-YNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLR-PDSVTFIAVLAA 481
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 40/291 (13%)
Query: 160 KCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE-GLEPNQFTY- 217
K G L +AR++F M +RD +SWT++ISGY N EA+ LF +M +E GL + F
Sbjct: 13 KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILS 72
Query: 218 ----------------------------------NAIIASYARRGDSNAAFAFFSRMTAE 243
+A++ Y + G + F M
Sbjct: 73 LALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMP-- 130
Query: 244 GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
+ ++V+W A+I+G ++ EAL F M + + + T + L+A +G++ G
Sbjct: 131 --LRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYG 188
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
REIH + G F + L MY+KCG L LFE ++V SW +I +
Sbjct: 189 REIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQI 248
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
G +++++ F RM E + NE T +V+S C+ G +E G ++ + R
Sbjct: 249 GQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRR 299
>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/540 (32%), Positives = 296/540 (54%), Gaps = 26/540 (4%)
Query: 9 NNLSVNYLDC-------LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCG 61
N + +++ +C +L C + + + +G++VH + + + L+ +Y CG
Sbjct: 1207 NRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVGGPDSFVMTGLIDMYGKCG 1266
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIV 119
V + VF++I + NV ++W M + + N +E + F+ MR+ + N FT +
Sbjct: 1267 QVECSSAVFEEIMDKNV--VSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGSI 1324
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
+ A L + +GK VH A + E + +DMY KCG AR ++ + D+
Sbjct: 1325 INAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMIYDELPTIDL 1384
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------NAIIASYARRGD 229
VSWT MI GY + ++ + LF L PN NA+I YA+
Sbjct: 1385 VSWTVMIVGYTQARQPNDGLRLFADEIRSDLLPNSALLQVFFQRVRFLNALIDMYAKCHT 1444
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+ A+A F + + D++TWN+MISG+AQ+ +AL+LF M + P+ +T+
Sbjct: 1445 ISDAYAIFHGVLEK----DVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVS 1500
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGL-HIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
L A G+IQ+G +HA + GL +++ G+AL++ Y+KCG + AR +F+ +K
Sbjct: 1501 TLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVFDSMGVK 1560
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
N+ +W+AMIG YG G S+ +F ML+E ++ NEV +VLSACS+ G+VE+G F
Sbjct: 1561 NIITWSAMIGGYGVQGDGSGSLSIFSNMLKEDLKPNEVIFTTVLSACSYSGMVEEGGRYF 1620
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
+SM + Y S +HYAC+VD+L RSG++ EA D ++++P+ S+ GAF +GC ++ R
Sbjct: 1621 KSMIQDYNFVPSMKHYACMVDLLARSGKLDEALDFIKKMPVQRDVSLYGAFLHGCGLYSR 1680
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
DL + E ++ + +V++SN+ A+DG+W + +R +M ++ + K PG+S VE
Sbjct: 1681 FDLGEVVVREMLQLHRNEACYYVLVSNLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLVE 1740
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 194/387 (50%), Gaps = 61/387 (15%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFI 108
+KLVGVY GDV SAR+VFD++PNP+ + W VM + N F + I +++ MR
Sbjct: 1156 TKLVGVYGALGDVRSARMVFDQMPNPDFYA--WKVMIRWYFLNDLFVDVIPFYNRMRMSF 1213
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
C+ FSI+LKAC L +I +G++VH ++G D V LIDMY KCG + +
Sbjct: 1214 RECDNIIFSIILKACSELREIVEGRKVHCQIVKVGGP-DSFVMTGLIDMYGKCGQVECSS 1272
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR-- 226
VF + +++VVSWTSMI+GY + +E +VLF RM+ +E N FT +II ++ +
Sbjct: 1273 AVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGSIINAFTKLR 1332
Query: 227 --------RGDSNAAFAFFSRMTAEGFVP---------------------DLVTWNAMIS 257
G + A S A F+ DLV+W MI
Sbjct: 1333 ALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMIYDELPTIDLVSWTVMIV 1392
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
G+ Q+++ N+ L+LF + S + PN+ + Q
Sbjct: 1393 GYTQARQPNDGLRLFADEIRSDLLPNSALLQVFFQR------------------------ 1428
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
V +ALIDMY+KC ++ DA +F K+V +WN+MI Y ++G ++ LF +M
Sbjct: 1429 -VRFLNALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMR 1487
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKG 404
+ + +TL+S LSA + G ++ G
Sbjct: 1488 SYSLAPDAITLVSTLSASATLGAIQVG 1514
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 115/296 (38%), Gaps = 38/296 (12%)
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
L+I + H + G ++ L+ +Y G + SAR VF M D +W MI
Sbjct: 1131 LNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMI 1190
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLE----------------------------------P 212
Y + + + RM++ E P
Sbjct: 1191 RWYFLNDLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVGGP 1250
Query: 213 NQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLF 272
+ F +I Y + G + A F + + ++V+W +MI+G+ Q+ E L LF
Sbjct: 1251 DSFVMTGLIDMYGKCGQVECSSAVFEEIMDK----NVVSWTSMIAGYVQNNCAEEGLVLF 1306
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
M + ++ N T+ ++ A ++ G+ +H + + F + +DMY KC
Sbjct: 1307 NRMRDALVESNPFTLGSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKC 1366
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
G +DAR +++ ++ SW MI Y + + + LF + + N L
Sbjct: 1367 GQTRDARMIYDELPTIDLVSWTVMIVGYTQARQPNDGLRLFADEIRSDLLPNSALL 1422
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/517 (35%), Positives = 280/517 (54%), Gaps = 48/517 (9%)
Query: 26 SKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
SK+ Q+HA L L+ L KL YA G ++ + +F + PNPNVF+ +
Sbjct: 33 SKSTHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHI 92
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ A A F A+ Y+S M + N FT S +LKAC + + VH+ A + G
Sbjct: 93 INAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT----LHPARAVHSHAIKFGL 148
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+ + V L+D Y++ G + SA+++F M ER +VS+T+M++ Y + EA VLFE
Sbjct: 149 SSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEG 208
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M ++ + +N +I YA+ G N A FF +M
Sbjct: 209 MGMKDV----VCWNVMIDGYAQHGCPNEALVFFRKMMMM--------------------- 243
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
G ++PN +TV VL + G G+++ G+ +H+ V G+ ++V G+A
Sbjct: 244 -------MGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTA 296
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+DMY KCGSL+DAR +F++ K+V +WN+MI YG HG D +++LF M G++ +
Sbjct: 297 LVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPS 356
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
++T ++VL+AC+H GLV KG E+F SMK+ YG++ EHY C+V++L R+GRM EAYDL+
Sbjct: 357 DITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLV 416
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM----GLRKPDGFVMLSNICAAD 500
R + + + G C IH V++GEE E+ GL +V+LSN+ AA
Sbjct: 417 RSMEVEPDPVLWGTLLWACRIHSN----VSLGEEIAEILVSNGLASSGTYVLLSNMYAAA 472
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFV 534
W +R +MK V+K+PG S +E +N EFV
Sbjct: 473 RNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFV 509
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 192/570 (33%), Positives = 304/570 (53%), Gaps = 64/570 (11%)
Query: 27 KALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+ L GKQVHA L +LN F + + LV +Y G + S++++ + ++ W
Sbjct: 212 EGLLMGKQVHAYGLRKGELNSFIINT-LVAMYGKMGKLASSKVLLGSFEGRD--LVTWNT 268
Query: 86 MASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
+ S+ N F EA+ Y M + FT S VL AC L ++ GK++HA A + G
Sbjct: 269 VLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNG 328
Query: 144 -FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
+ + VG+AL+DMY C + S RVF GMF+R + W +MI+GY +EA++LF
Sbjct: 329 SLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLF 388
Query: 203 ERMK------------------------------------LEGLEPNQFTYNAIIASYAR 226
M+ GL+ ++F NA++ Y+R
Sbjct: 389 IEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSR 448
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV--------- 277
G + A F +M DLVTWN +I+G+ S+R +AL + M +
Sbjct: 449 LGKIDIAKRIFGKMEDR----DLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERA 504
Query: 278 --SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+KPN++T+ +L + ++ G+EIHA + L DV GSAL+DMY+KCG L
Sbjct: 505 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 564
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ +R +F+ I+NV +WN ++ YG HG +I++ M+ +G++ NEVT ISV +AC
Sbjct: 565 QMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAAC 624
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH G+V +GL+IF +MK+ YGV+ S +HYACVVD+L R+GR+ EAY L+ +P
Sbjct: 625 SHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDK-- 682
Query: 456 AGAFRN---GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
AGA+ + C IH ++ + ++ +V+L+NI ++ G W++A +R+
Sbjct: 683 AGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRN 742
Query: 513 MKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
MK + V+K+PG S +E +E V K V +S
Sbjct: 743 MKAQGVRKEPGCSWIEHGDE-VHKFVAGDS 771
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 241/524 (45%), Gaps = 69/524 (13%)
Query: 32 GKQVHALLCTNDLNIFSLK--SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
GKQ+HA + + S+ + LV +Y CGD + VFD+I N N ++ +
Sbjct: 112 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 171
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV------GLLDIKKGKQVHAVATQMG 143
++ A+ F M + + FT V AC GLL GKQVHA + G
Sbjct: 172 SFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLL---MGKQVHAYGLRKG 228
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFE-RDVVSWTSMISGYCNVSKVDEAVVLF 202
N + N L+ MY K G L S+ +V G FE RD+V+W +++S C + EA+
Sbjct: 229 ELNSFII-NTLVAMYGKMGKLASS-KVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYL 286
Query: 203 ERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFS-RMTAEGFVPDLVT----- 251
M LEG+EP+ FT ++++ + + R G A+A + + FV +
Sbjct: 287 REMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 346
Query: 252 ---------------------WNAMISGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTG 289
WNAMI+G+AQ++ + EAL LF M S G+ N+ T+ G
Sbjct: 347 CKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAG 406
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
V+ A +G+ IH V + GL D F +AL+DMYS+ G + A+ +F ++
Sbjct: 407 VVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRD 466
Query: 350 VASWNAMIGCY---GKHG---MVDSSIELFERMLEE-----GMRANEVTLISVLSACSHG 398
+ +WN +I Y +H ++ +++ ER E ++ N +TL+++L +C+
Sbjct: 467 LVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAAL 526
Query: 399 GLVEKGLEIFR-SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM---YVTNS 454
+ KG EI ++K ++ + +VDM + G + + + Q+P+ N
Sbjct: 527 SALAKGKEIHAYAIKNNLATDVAVG--SALVDMYAKCGCLQMSRKVFDQIPIRNVITWNV 584
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+ A+ +HG A+ M G+ KP+ +S A
Sbjct: 585 IVMAY----GMHGNSQDAIDMLRMMMVQGV-KPNEVTFISVFAA 623
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 189/382 (49%), Gaps = 41/382 (10%)
Query: 94 FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND-VSVGN 152
+EA+ + M + + F F +LKA L D+ GKQ+HA + G+ D V+V N
Sbjct: 74 LREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVAN 133
Query: 153 ALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEP 212
L+++Y KCG + +VF + ER+ VSW S+IS C+ K + A+ F M E +EP
Sbjct: 134 TLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEP 193
Query: 213 NQFTYNAI------------------IASYA-RRGDSNA-----AFAFFSRM-------- 240
+ FT ++ + +Y R+G+ N+ A + +M
Sbjct: 194 SSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINTLVAMYGKMGKLASSKV 253
Query: 241 ---TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+ EG DLVTWN ++S Q+++ EAL+ + M++ G++P+ T++ VL A
Sbjct: 254 LLGSFEG--RDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHL 311
Query: 298 GSIQIGREIHALVCRMG-LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
++ G+E+HA + G L + F GSAL+DMY C + +F+ + + WNAM
Sbjct: 312 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAM 371
Query: 357 IGCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
I Y ++ + ++ LF M E G+ AN T+ V+ AC G K I + +R
Sbjct: 372 ITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKR- 430
Query: 416 GVKISKEHYACVVDMLCRSGRM 437
G+ + ++DM R G++
Sbjct: 431 GLDRDRFVQNALMDMYSRLGKI 452
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 208/456 (45%), Gaps = 60/456 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN---DLNIFSLKSKLVGVYAGCGDVNSARLVFDK 72
+ +L C + LR GK++HA N D N F + S LV +Y C V S VFD
Sbjct: 301 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGCRVFDG 359
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKK 131
+ + + + N M+ A +EA+ F M E N T + V+ ACV K
Sbjct: 360 MFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSK 419
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
+ +H + G + D V NAL+DMYS+ G + A+R+F M +RD+V+W ++I+GY
Sbjct: 420 KEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVF 479
Query: 192 VSKVDEAVVLFERMKL-----------EGLEPNQFTYNAIIASYA-----RRGDSNAAFA 235
+ ++A+++ +M++ L+PN T I+ S A +G A+A
Sbjct: 480 SERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 539
Query: 236 FFSRMTAE------------------------GFVP--DLVTWNAMISGFAQSKRENEAL 269
+ + + +P +++TWN ++ + +A+
Sbjct: 540 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAI 599
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDM 328
+ + M+V G+KPN VT V A +G + G +I + + G+ + ++D+
Sbjct: 600 DMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDL 659
Query: 329 YSKCGSLKDARTLFEIT--RIKNVASWNAMIGCYGKHGMVD----SSIELFERMLEEGMR 382
+ G +K+A L + +W++++G H ++ ++ L + LE +
Sbjct: 660 LGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQ--LEPNVA 717
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
++ V L ++ S+ GL K E+ R+MK + GV+
Sbjct: 718 SHYVLLANIYSS---AGLWYKATEVRRNMKAQ-GVR 749
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
S+ ++ P+ W ++ +S EA+ + M+V GIKP+N +L+A
Sbjct: 49 SKFISQSHSPEW--WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADL 106
Query: 298 GSIQIGREIHALVCRMGLHIDVFT-GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+ +G++IHA V + G +D T + L+++Y KCG +F+ +N SWN++
Sbjct: 107 QDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSL 166
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
I + ++E F ML+E + + TL+SV ACS+ + E
Sbjct: 167 ISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPE 212
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 295/524 (56%), Gaps = 17/524 (3%)
Query: 29 LRQGKQVHALLCTNDL--NIFSLKSKLVGVYA--GCGDVNSARLVFDKIPNPNVFMLNWM 84
L Q Q+HAL+ L N F L L ++A D+ AR VFD+IP+P+ F+ N M
Sbjct: 16 LNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTM 75
Query: 85 VMASAFTGNFQEAIGYFSLMR-EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
+ A + N QE++ F MR + + ++ S+V++AC L D G+++H ++G
Sbjct: 76 IRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIG 135
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
+D+ V ALI+MY+K G + AR + M D+V + +++ Y V +++ A LF+
Sbjct: 136 LGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFD 195
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
RM E + ++N +I +A GD A F R DL++W++MI+ +A+++
Sbjct: 196 RMP----ERDLVSWNTMIHGHASLGDVGTAKKLFDRTCER----DLISWSSMIAAYAKAR 247
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
+ NEAL+LF M ++ + P+ VT+ VL A G G++ +G+ IH + R + ID+ G+
Sbjct: 248 QSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGT 307
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
+L+DMY+KCG + ++ +F ++V +W+AMI HG + +++ F +M+ E ++
Sbjct: 308 SLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKP 367
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
N+VT I VLSACSH GLV++G F SM + Y V EHY CVVD+L R+GR+ EA +L
Sbjct: 368 NDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMEL 427
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
++ +P + A C I+ ++A E+ +V+LSNI + EW
Sbjct: 428 IKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEW 487
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVEKRN---EFVE-KEVQNESK 543
+ N+R++MK N+QK PG S +E N EFV + ESK
Sbjct: 488 DKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESK 531
>gi|357464703|ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491681|gb|AES72884.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 195/582 (33%), Positives = 294/582 (50%), Gaps = 86/582 (14%)
Query: 2 NRLIFPINNLS--VNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYA 58
N ++F N+ S + L+ C+ +K+L+ GK +H+ L L + L + L+ +Y+
Sbjct: 65 NTVMFHTNDFSSTIEKFSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYS 124
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM-------------- 104
CG S FD +PN N ++ + G F +A F M
Sbjct: 125 KCGCKESIHKAFDDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISG 184
Query: 105 ---REF------IYR----------CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
EF +R ++FT ++ C L +K +QVH VAT +GF
Sbjct: 185 LTRHEFHKEAVKFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFR 244
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
++ + NALID Y KCG S+ +F M E+D VSWTSM+ Y S++D+A +F M
Sbjct: 245 TNLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEM 304
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
P ++T V+W A+ISGF ++ R
Sbjct: 305 ------PVKYT---------------------------------VSWAALISGFVKNGRC 325
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID----VFT 321
EAL++F M+ G+ P T VL A I G+++H + R G D V+
Sbjct: 326 YEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIR-GRSSDNLFNVYV 384
Query: 322 GSALIDMYSKCGSLKDARTLFEI-TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
+AL+DMY+KCG +K A LFE+ +K+V SWN +I + ++G + S+ +F+RM+E
Sbjct: 385 FNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESN 444
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ N VT + VLSAC+H GLV GLE+ SM+ RYGVK HYA ++D+L R R+ EA
Sbjct: 445 IEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEA 504
Query: 441 YDLLRQVPMYVTNSMA--GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
L+ +VP ++N +A GA GC +HG +LA E F + +VMLSNI A
Sbjct: 505 MCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENTGRYVMLSNIYA 564
Query: 499 ADGEWHEAENLRKIMKEKNVQKQPGFSRV---EKRNEFVEKE 537
A G W + +R +MKE+ ++K+P FSR+ E R+EFV K+
Sbjct: 565 ASGRWSDTNRIRNVMKERGLKKEPAFSRIELKESRHEFVAKD 606
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 177/565 (31%), Positives = 297/565 (52%), Gaps = 43/565 (7%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C S A GK +H +L + + L + L+ +Y CG + A+ VF+ +
Sbjct: 492 LLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARD 551
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ N M+ A G+++ A F M++ +K TF+ VL C ++ G+Q+H
Sbjct: 552 IISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHM 611
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ + G + DV++GNALI+MY +CG L A VFH + R+V+SWT+MI G+ + + +
Sbjct: 612 LIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRK 671
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
A LF +M+ +G +P + T+ NA+I+
Sbjct: 672 AFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALIS 731
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+Y++ G A F +M D+++WN MI+G+AQ+ AL+ M G+
Sbjct: 732 AYSKSGSMTDARKVFDKMPNR----DIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVL 787
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N + +L A +++ G+ +HA + + + DV G+ALI MY+KCGSL++A+ +F
Sbjct: 788 NKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVF 847
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ KNV +WNAMI Y +HG+ +++ F M +EG++ + T S+LSAC+H GLV
Sbjct: 848 DNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVM 907
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G IF S++ ++G+ + EHY C+V +L R+GR EA L+ Q+P ++
Sbjct: 908 EGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGA 967
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IHG LA ++ R P +V+LSN+ AA G W + +R++M+ + ++K+P
Sbjct: 968 CRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEP 1027
Query: 523 GFSRVEKRN---EFVEKEVQNESKA 544
G S +E N EF+ + + A
Sbjct: 1028 GRSWIEVDNIIHEFIAADRSHPETA 1052
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/498 (29%), Positives = 245/498 (49%), Gaps = 49/498 (9%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDV 63
I P +N LD M L +GK++H L LN + + L ++ CGDV
Sbjct: 280 IPPDKVTYINLLDAFTTPSM----LDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDV 335
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
A+ + + +V + N ++ A A G+++EA + MR N+ T+ VL AC
Sbjct: 336 AGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNAC 395
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+ G+ +H+ +++G +DV +GN+LI MY++CG L AR +F+ M +RD++SW
Sbjct: 396 STSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWN 455
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------- 217
++I+GY EA+ L+++M+ EG++P + T+
Sbjct: 456 AIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS 515
Query: 218 ---------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
NA++ Y R G A F A D+++WN+MI+G AQ A
Sbjct: 516 GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR----DIISWNSMIAGHAQHGSYEAA 571
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
KLF M G++P+ +T VL ++++GR+IH L+ GL +DV G+ALI+M
Sbjct: 572 YKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINM 631
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y +CGSL+DA +F R +NV SW AMIG + G + ELF +M +G + + T
Sbjct: 632 YIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTF 691
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
S+L AC +++G ++ + G ++ ++ +SG M +A + ++P
Sbjct: 692 SSILKACMSSACLDEGKKVIAHILNS-GYELDTGVGNALISAYSKSGSMTDARKVFDKMP 750
Query: 449 ----MYVTNSMAGAFRNG 462
M +AG +NG
Sbjct: 751 NRDIMSWNKMIAGYAQNG 768
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/529 (28%), Positives = 253/529 (47%), Gaps = 54/529 (10%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVN 64
P Y+D L+ C + ++L + K++HA + + +IF L + L+ +Y C V+
Sbjct: 77 PTETNRAAYVD-LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIF-LSNLLINMYVKCRSVS 134
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
A VF K+P +V N ++ A G ++A F M+ + +K T+ +L AC
Sbjct: 135 DAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACC 194
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
+++ GK++H+ + G++ D V N+L++MY KC L SAR+VF G++ RDVVS+ +
Sbjct: 195 SPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNT 254
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------- 217
M+ Y + V+E + LF +M EG+ P++ TY
Sbjct: 255 MLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEG 314
Query: 218 --------NAIIASYARRGDSNAAFAFFSRMTAEGFVP-DLVTWNAMISGFAQSKRENEA 268
A+ + R GD A + E F D+V +NA+I+ AQ EA
Sbjct: 315 LNSDIRVGTALATMFVRCGDVAGA-----KQALEAFADRDVVVYNALIAALAQHGHYEEA 369
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
+ + M G+ N T VL A + ++ G IH+ + +G DV G++LI M
Sbjct: 370 FEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISM 429
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y++CG L AR LF +++ SWNA+I Y + +++L+++M EG++ VT
Sbjct: 430 YARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTF 489
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL---R 445
+ +LSAC++ G I + R G+K + +++M R G ++EA ++ R
Sbjct: 490 LHLLSACTNSSAYSDGKMIHEDIL-RSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTR 548
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
+ NSM G HG + A + E + GL +PD S
Sbjct: 549 ARDIISWNSMIA----GHAQHGSYEAAYKLFLEMKKEGL-EPDKITFAS 592
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 237/480 (49%), Gaps = 44/480 (9%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C L GK++H+ ++ +++ L+ +Y C D+ SAR VF I +
Sbjct: 189 ILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRD 248
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V N M+ A +E IG F M +K T+ +L A + +GK++H
Sbjct: 249 VVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHK 308
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+A G +D+ VG AL M+ +CG + A++ +RDVV + ++I+ +E
Sbjct: 309 LAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEE 368
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
A + +M+ +G+ N+ TY N++I+
Sbjct: 369 AFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLIS 428
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YAR GD A F+ M DL++WNA+I+G+A+ + EA+KL+K M G+KP
Sbjct: 429 MYARCGDLPRARELFNTMPKR----DLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKP 484
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
VT +L A + + G+ IH + R G+ + +AL++MY +CGS+ +A+ +F
Sbjct: 485 GRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVF 544
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E TR +++ SWN+MI + +HG +++ +LF M +EG+ +++T SVL C + +E
Sbjct: 545 EGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALE 604
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL---LRQVPMYVTNSMAGAF 459
G +I + E G+++ +++M R G + +AY++ LR + +M G F
Sbjct: 605 LGRQIHMLIIES-GLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGF 663
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/511 (36%), Positives = 288/511 (56%), Gaps = 23/511 (4%)
Query: 27 KALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYA-GCGDVNSARLVFDKIPNPNVFMLNWM 84
K+ K++HA L+ T + + +K V YA +++ A VF I P+ + +W
Sbjct: 38 KSTEDLKKIHAQLIITGQIKDTFIATKTVESYAVSARNIDYAFWVFVGINYPDSY--SWT 95
Query: 85 VMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
M F N ++A+ ++ LMR+ NKFTF VLKA ++G+ VH ++
Sbjct: 96 TMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLVKV 155
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
GF DV NALI MY KCG + A +F M +VV+W +MI+G + A LF
Sbjct: 156 GFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARRLF 215
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
M E N ++NA++ Y++ G + A + F M D+V+W +MIS + Q+
Sbjct: 216 GEMP----ERNVGSWNAVVGGYSKLGHVDIARSLFDLMPER----DVVSWGSMISAYVQN 267
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
R EAL+LFK M+++G+ +++ +T +L A G++ +GR IHA + R L DVF
Sbjct: 268 GRAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLD 327
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+AL+DMY+KCG + A +F KN+ SWNAM+ HG +++ELF++M G+
Sbjct: 328 TALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVG 387
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
N++T ++VLSACSH G VE+G + F M + + + EHY C+VD+LCR G + EA +
Sbjct: 388 PNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKE 447
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEF--FEMGLRKPDG--FVMLSNICA 498
++R +P+ + GA N C +HG ++ GE+ + L DG +V+LSNI A
Sbjct: 448 MIRTMPLEPNVVIWGALLNACKVHGYTNV----GEDVVGYIQKLVSEDGGCYVLLSNIFA 503
Query: 499 ADGEWHEAENLRKIMKEKNVQKQ-PGFSRVE 528
A +W+E E RK+MK+ V+K+ PG+S +E
Sbjct: 504 AKSQWNEVEKTRKMMKQMGVEKKIPGYSSIE 534
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 287/515 (55%), Gaps = 21/515 (4%)
Query: 25 KSKALRQGKQVHALLCTNDLNIFSLKSKL-----VGVYAGCGDVNSARLVFDKIPNPNVF 79
+ ++LR KQ+HA++ S S+L A G + A LVFD+IP P+ F
Sbjct: 17 RCRSLRHIKQMHAVMALR--GFLSDPSELRELLFASAVAVRGAIAHAYLVFDQIPRPDRF 74
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLM----REFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
M N ++ +A T ++A+ ++ M R +K TF VL+AC + G QV
Sbjct: 75 MYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQV 134
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA + G E+D V NALI M++ CG L A +F G D V+W++MI+G +
Sbjct: 135 HAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDI 194
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
A LF+ ++ L ++N +I +YA+RGD A F ++ D+V+WN M
Sbjct: 195 GAARDLFDECPVKDL----VSWNVMITAYAKRGDMALARELFDQVPER----DVVSWNVM 246
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
ISG+ + AL+LF+ M G KP+ VT+ +L A +G + +G+ +H+ + M
Sbjct: 247 ISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFS 306
Query: 316 H--IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
V G+ALIDMY+KCGS+K A +F R K+V++WN+++G HG V SI++F
Sbjct: 307 RNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMF 366
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
E+ML+ +R +E+T ++VL ACSHGG+V+KG E F M+ +Y V+ + +HY C+VDML R
Sbjct: 367 EKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGR 426
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G + EA++ + + + + + C +HG +LA + + + +V+L
Sbjct: 427 AGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLL 486
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
SNI A+ GEW +E +RK+M + V K+ G + V+
Sbjct: 487 SNIYASVGEWFGSEKMRKLMDDSGVNKEAGQTFVD 521
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 303/547 (55%), Gaps = 33/547 (6%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
CLL C ++ L++G+++H L+ TN + N+F + + ++ +YA C +++A +F+++ +
Sbjct: 150 CLLQLCGENLDLKKGREIHGLIITNGFESNLFVM-TAVMSLYAKCRQIDNAYKMFERMQH 208
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
++ +V A G+ + A+ M+E + + T +L A + ++ G+ +
Sbjct: 209 KDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSI 268
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H A + GFE+ V+V NAL+DMY KCG AR VF GM + VVSW +MI G +
Sbjct: 269 HGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGES 328
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------SNAA 233
+EA F +M EG P + T ++ + A GD N+
Sbjct: 329 EEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSL 388
Query: 234 FAFFSRMTAEGFVPDL--------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ +S+ + VTWNAMI G+AQ+ EAL LF M GIK +
Sbjct: 389 ISMYSKCKRVDIAASIFNNLEKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCF 448
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T+ GV+ A + + IH L R + +VF +AL+DMY+KCG++K AR LF++
Sbjct: 449 TLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMM 508
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
+ ++V +WNAMI YG HG+ +++LF M + ++ N++T +SV+SACSH G VE+GL
Sbjct: 509 QERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGL 568
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
+F+SM+E Y ++ + +HY+ +VD+L R+G++ +A++ ++++P+ S+ GA C I
Sbjct: 569 LLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKI 628
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
H +L ++ F++ + V+L+NI A++ W + +R M++K + K PG S
Sbjct: 629 HKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCS 688
Query: 526 RVEKRNE 532
VE RNE
Sbjct: 689 WVELRNE 695
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 250/544 (45%), Gaps = 67/544 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C K L Q + + N N ++K++ ++ G + A VF+ +
Sbjct: 53 LLENCTSKKELYQ---ILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKL 109
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ + M+ A + +A+ +F M R ++ +L+ C LD+KKG+++H
Sbjct: 110 DVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHG 169
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ GFE+++ V A++ +Y+KC + +A ++F M +D+VSWT++++GY
Sbjct: 170 LIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKR 229
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAF---------------- 236
A+ L +M+ G +P+ T +I+ + A R G S +AF
Sbjct: 230 ALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLD 289
Query: 237 ---------FSRMTAEGF-VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
+R+ +G +V+WN MI G AQ+ EA F ML G P VT
Sbjct: 290 MYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVT 349
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ GVL A G ++ G +H L+ ++ L +V ++LI MYSKC + A ++F
Sbjct: 350 MMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE 409
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
NV +WNAMI Y ++G V ++ LF M +G++ + TL+ V++A +
Sbjct: 410 KTNV-TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALA-------DFS 461
Query: 407 IFRSMKERYGVKISKEHYAC----------VVDMLCRSGRMVEA---YDLLRQVPMYVTN 453
+ R K +G+ + AC +VDM + G + A +D++++ + N
Sbjct: 462 VNRQAKWIHGLAVR----ACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWN 517
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRK 511
+M +G HG + + E + G KP+ LS I C+ G E L K
Sbjct: 518 AMI----DGYGTHGVGKETLDLFNE-MQKGAVKPNDITFLSVISACSHSGFVEEGLLLFK 572
Query: 512 IMKE 515
M+E
Sbjct: 573 SMQE 576
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 189/539 (35%), Positives = 291/539 (53%), Gaps = 46/539 (8%)
Query: 32 GKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G+ HA+ D ++F + S L+ +Y G AR VFD +P N ++W M S
Sbjct: 127 GRLAHAVAIKMDSCRDVF-VGSSLMNMYCKAGLTPEARKVFDTMPERNS--VSWATMISG 183
Query: 90 FTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ EA+G F LMR N+F F+ VL A + GKQ+H +A + G +
Sbjct: 184 YASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSI 243
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
VSVGNAL+ MY+KCG L A + F +++ ++W++MI+GY D+A+ LF M L
Sbjct: 244 VSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHL 303
Query: 208 EGLEPNQFTYNAIIASYARRG---------DSNAAFAFFSR---MTA------------- 242
G+ P++FT+ +I + + G D F S+ MTA
Sbjct: 304 SGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVD 363
Query: 243 --EGF----VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
+GF PD+V W +MI G+ Q+ +AL L+ M + GI PN +T+ VL+A
Sbjct: 364 ARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSS 423
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+++ G++IHA + G ++V GSAL MY+KCG LKD +F ++V SWNAM
Sbjct: 424 LAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAM 483
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I ++G ++ELFE M EG + + VT +++LSACSH GLVE+G FR M + +G
Sbjct: 484 ISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFG 543
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVP----MYVTNSMAGAFRNGCNIHGRRDLA 472
+ EHYAC+VD+L R+G++ EA + M + + GA RN N +L
Sbjct: 544 MDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNY----ELG 599
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
GE+ E+G ++ +V+LS+I +A G W + E +R++MK + V K+PG S +E ++
Sbjct: 600 AYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKS 658
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 268/518 (51%), Gaps = 59/518 (11%)
Query: 26 SKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+++L++GK +HA + + + + + LV +YA C + A+ VF++I N +V N ++
Sbjct: 19 NRSLQKGKALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCII 78
Query: 86 MASAFTG--NFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
+ G + F MR N TF+ V A L+D G+ HAVA +M
Sbjct: 79 NGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMD 138
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
DV VG++L++MY K GL AR+VF M ER+ VSW +MISGY + EA+ LF
Sbjct: 139 SCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFR 198
Query: 204 RMKLEGLEPNQFTY-----------------------------------NAIIASYARRG 228
M+ E N+F + NA++ YA+ G
Sbjct: 199 LMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCG 258
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
+ A F + + + +TW+AMI+G+AQS ++ALKLF M +SGI+P+ T
Sbjct: 259 SLDDALQTFETSSDK----NSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFV 314
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
GV+ A G+ G+++H + ++G ++ +AL+DMY+KC S+ DAR F+ +
Sbjct: 315 GVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEP 374
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
++ W +MIG Y ++G + ++ L+ RM EG+ NE+T+ SVL ACS +E+G +I
Sbjct: 375 DIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIH 434
Query: 409 -RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSM-AGAFRNGC 463
R++K +G+++ + + M + G + + + R++P + N+M +G +NGC
Sbjct: 435 ARTVKYGFGLEVPIG--SALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGC 492
Query: 464 NIHGRRDLAVTMGEEFFEMGLR--KPDGFVMLSNICAA 499
G+ L E F EM L KPD +V NI +A
Sbjct: 493 ---GKEAL-----ELFEEMQLEGTKPD-YVTFVNILSA 521
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C AL QGKQ+HA + + S L +YA CG + LVF ++P +
Sbjct: 417 VLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARD 476
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQVH 136
V N M+ + G +EA+ F M+ + + TF +L AC + +++G
Sbjct: 477 VISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFR 536
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
+ + G + V ++D+ S+ G L A
Sbjct: 537 MMFDEFGMDPRVEHYACMVDILSRAGKLKEA 567
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 187/557 (33%), Positives = 303/557 (54%), Gaps = 42/557 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + +R+G++VH + + ++F + + L+ Y CG + A VFD++P
Sbjct: 47 VLKACADAFEVRKGREVHGSVVKLGFESDVF-VGNTLLSFYGNCGGLRDAGRVFDEMPEK 105
Query: 77 NVFMLNWMVMASAFTGN---FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+ +++W M F+ N +++A+ F LM + + N T S L V L K G+
Sbjct: 106 D--LVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGR 163
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+VH + +MG E+D+ + N+LIDMY+K G A VF+ + ++VVSW +MI+ +
Sbjct: 164 EVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNR 223
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG-------------DSNAAFAFF--- 237
AV L +M+ G PN T+ ++ + AR G AF F
Sbjct: 224 FELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSN 283
Query: 238 --------------SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+R + + D V++N +I G +Q+ +E+L LF M + G+K +
Sbjct: 284 ALTDMYAKSGHLKLARNVFDTSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQD 343
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
NV+ G L A +I+ G+EIH + R HI +F ++L+D Y+KCG + AR +F+
Sbjct: 344 NVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFD 403
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
K+VASWN MI YG G +D++I+LFE M ++ + + V+ I+VLSACSHGGL+EK
Sbjct: 404 RMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEK 463
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
G + F +K R G++ ++ HYAC+VD+L R+G M EA +L++ +P+ ++ GA C
Sbjct: 464 GRKYFDELKAR-GIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGAC 522
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
I+G +LA E FE+ + +LSN+ A G W EA +R++MK + V+K PG
Sbjct: 523 RIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPG 582
Query: 524 FSRV---EKRNEFVEKE 537
S V E+ + FV E
Sbjct: 583 CSWVQIGEQAHAFVVGE 599
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 176/334 (52%), Gaps = 41/334 (12%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
R + TF VLKAC +++KG++VH ++GFE+DV VGN L+ Y CG L A R
Sbjct: 38 RPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGR 97
Query: 170 VFHGMFERDVVSWTSMISGY-CNVSKVDEAVVLFERMKLEGLEPNQ-------------- 214
VF M E+D+VSW +MI + N +A+ +F M EGL+PN
Sbjct: 98 VFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELE 157
Query: 215 ---------------------FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
F N++I YA+ G S A F ++ A+ ++V+WN
Sbjct: 158 FFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAK----NVVSWN 213
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
AMI+ FAQ++ E A+ L + M G PN+VT T VL A G ++ G+EIHA M
Sbjct: 214 AMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHM 273
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
G D+F +AL DMY+K G LK AR +F+ T +++ S+N +I + + S+ LF
Sbjct: 274 GCAFDLFVSNALTDMYAKSGHLKLARNVFD-TSLRDEVSYNILIVGHSQTSDCSESLSLF 332
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
M G++ + V+ + LSAC++ +++G EI
Sbjct: 333 SEMQLMGLKQDNVSFMGALSACANLTAIKQGKEI 366
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 110/203 (54%), Gaps = 15/203 (7%)
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
WN +I G++ + L+++ M+ G++P++ T VL+A ++ GRE+H V
Sbjct: 10 WNTLIRGYSIAGVGG-GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM-VDSSI 370
++G DVF G+ L+ Y CG L+DA +F+ K++ SWN MIG + +G ++
Sbjct: 69 KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA----- 425
++F M++EG++ N +T+ S L LVE LE F++ +E +G I +
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPV-----LVE--LEFFKAGREVHGSSIRMGLESDIFIA 181
Query: 426 -CVVDMLCRSGRMVEAYDLLRQV 447
++DM +SG EA ++ ++
Sbjct: 182 NSLIDMYAKSGHSTEASNVFYKL 204
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 189/552 (34%), Positives = 275/552 (49%), Gaps = 71/552 (12%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMR- 105
L K + VY+ GD+ AR +FDKIP P+ + W ++ SA T G EAI Y++ R
Sbjct: 13 LALKFIKVYSNSGDLQRARHLFDKIPQPD--LPTWTILISALTKHGRSLEAIQYYNDFRH 70
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
+ +K V KAC L D+ K+VH A + GF +DV +GNALIDMY KC
Sbjct: 71 KNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSE 130
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
AR VF GM RDV+SWTSM S Y N + EA+ F +M L G PN T ++I+ +
Sbjct: 131 GARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACT 190
Query: 226 -----RRGDSNAAFAFFSRMTAEGFVP--------------------------DLVTWN- 253
+ G F + M FV D V+WN
Sbjct: 191 DLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNV 250
Query: 254 ----------------------------------AMISGFAQSKRENEALKLFKGMLVSG 279
A+I G Q+ R +AL++ M SG
Sbjct: 251 LITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSG 310
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
KPN +T+T VL A S++ G++IH + R D+ T +AL+ MY+KCG L+ +R
Sbjct: 311 FKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSR 370
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F + ++ SWN MI HG + ++ LF M++ G+R N VT VLS CSH
Sbjct: 371 RVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSR 430
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LV++GL IF SM + V+ +H++C+VD+L R+GR+ EAY+ ++++P+ T GA
Sbjct: 431 LVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGAL 490
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
GC ++ +L FE+ P +V+LSNI + W EA RK+M+++ V
Sbjct: 491 LGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVT 550
Query: 520 KQPGFSRVEKRN 531
K PG S ++ RN
Sbjct: 551 KNPGCSWIQVRN 562
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 196/570 (34%), Positives = 300/570 (52%), Gaps = 64/570 (11%)
Query: 27 KALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+ L GKQVHA L +LN F + + LV +Y G + S++++ + ++ W
Sbjct: 216 EGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRD--LVTWNT 272
Query: 86 MASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
+ S+ N Q EA+ Y M ++FT S VL AC L ++ GK++HA A + G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 144 -FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
+ + VG+AL+DMY C + S RRVF GMF+R + W +MI+GY EA++LF
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 203 ERMK------------------------------------LEGLEPNQFTYNAIIASYAR 226
M+ GL+ ++F N ++ Y+R
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL-----------KLFKGM 275
G + A F +M DLVTWN MI+G+ S+ +AL K+ KG
Sbjct: 453 LGKIDIAMRIFGKMEDR----DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 508
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+KPN++T+ +L + ++ G+EIHA + L DV GSAL+DMY+KCG L
Sbjct: 509 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ +R +F+ KNV +WN +I YG HG +I+L M+ +G++ NEVT ISV +AC
Sbjct: 569 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH G+V++GL IF MK YGV+ S +HYACVVD+L R+GR+ EAY L+ +P
Sbjct: 629 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNK-- 686
Query: 456 AGAFRN---GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
AGA+ + IH ++ + ++ +V+L+NI ++ G W +A +R+
Sbjct: 687 AGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRN 746
Query: 513 MKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
MKE+ V+K+PG S +E +E V K V +S
Sbjct: 747 MKEQGVRKEPGCSWIEHGDE-VHKFVAGDS 775
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 229/486 (47%), Gaps = 54/486 (11%)
Query: 14 NY-LDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
NY LL + + GKQ+HA + ++ ++ + LV +Y CGD + VF
Sbjct: 97 NYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVF 156
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL--- 127
D+I N N ++ + ++ A+ F M + + FT V+ AC L
Sbjct: 157 DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+ GKQVHA + G N + N L+ MY K G L S++ + RD+V+W +++S
Sbjct: 217 GLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFS---- 238
C ++ EA+ M LEG+EP++FT ++++ + + R G A+A +
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 335
Query: 239 ----------------------RMTAEG-FVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
R +G F + WNAMI+G++Q++ + EAL LF GM
Sbjct: 336 ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 395
Query: 276 LVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
S G+ N+ T+ GV+ A +G+ IH V + GL D F + L+DMYS+ G
Sbjct: 396 EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 455
Query: 335 LKDARTLFEITRIKNVASWNAMIGCY--GKHG----MVDSSIELFERMLEEG-----MRA 383
+ A +F +++ +WN MI Y +H ++ ++ ER + +G ++
Sbjct: 456 IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 515
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFR-SMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
N +TL+++L +C+ + KG EI ++K ++ + +VDM + G + +
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG--SALVDMYAKCGCLQMSRK 573
Query: 443 LLRQVP 448
+ Q+P
Sbjct: 574 VFDQIP 579
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 180/360 (50%), Gaps = 47/360 (13%)
Query: 94 FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND-VSVGN 152
+EA+ + M + + + F +LKA L D++ GKQ+HA + G+ D V+V N
Sbjct: 78 LREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVAN 137
Query: 153 ALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEP 212
L+++Y KCG + +VF + ER+ VSW S+IS C+ K + A+ F M E +EP
Sbjct: 138 TLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEP 197
Query: 213 NQFTYNAIIASYA-------------------RRGDSN--------AAFAFFSRMTAEGF 245
+ FT +++ + + R+G+ N A + ++ +
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKV 257
Query: 246 V------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
+ DLVTWN ++S Q+++ EAL+ + M++ G++P+ T++ VL A
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 300 IQIGREIHALVCRMG-LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++ G+E+HA + G L + F GSAL+DMY C + R +F+ + + WNAMI
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 359 CYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACS-----------HGGLVEKGLE 406
Y ++ ++ LF M E G+ AN T+ V+ AC HG +V++GL+
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 208/456 (45%), Gaps = 60/456 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN---DLNIFSLKSKLVGVYAGCGDVNSARLVFDK 72
+ +L C + LR GK++HA N D N F + S LV +Y C V S R VFD
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGRRVFDG 363
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKK 131
+ + + + N M+ + + +EA+ F M E N T + V+ ACV +
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
+ +H + G + D V N L+DMYS+ G + A R+F M +RD+V+W +MI+GY
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 192 VSKVDEAVVLFERMK-LE----------GLEPNQFTYNAIIASYA-----RRGDSNAAFA 235
++A++L +M+ LE L+PN T I+ S A +G A+A
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543
Query: 236 FFSRMTAEGFV--------------------------PDLVTWNAMISGFAQSKRENEAL 269
+ + + V +++TWN +I + EA+
Sbjct: 544 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 603
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDM 328
L + M+V G+KPN VT V A +G + G R + + G+ + ++D+
Sbjct: 604 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL 663
Query: 329 YSKCGSLKDARTLFEITR--IKNVASWNAMIGCYGKHGMVD----SSIELFERMLEEGMR 382
+ G +K+A L + +W++++G H ++ ++ L + LE +
Sbjct: 664 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ--LEPNVA 721
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
++ V L ++ S+ GL +K E+ R+MKE+ GV+
Sbjct: 722 SHYVLLANIYSS---AGLWDKATEVRRNMKEQ-GVR 753
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 1/152 (0%)
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
W ++ +S EA+ + M+V GIKP+N +L+A +++G++IHA V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 312 RMGLHIDVFT-GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
+ G +D T + L+++Y KCG +F+ +N SWN++I + ++
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E F ML+E + + TL+SV++ACS+ + E
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 196/570 (34%), Positives = 300/570 (52%), Gaps = 64/570 (11%)
Query: 27 KALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+ L GKQVHA L +LN F + + LV +Y G + S++++ + ++ W
Sbjct: 216 EGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRD--LVTWNT 272
Query: 86 MASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
+ S+ N Q EA+ Y M ++FT S VL AC L ++ GK++HA A + G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 144 -FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
+ + VG+AL+DMY C + S RRVF GMF+R + W +MI+GY EA++LF
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 203 ERMK------------------------------------LEGLEPNQFTYNAIIASYAR 226
M+ GL+ ++F N ++ Y+R
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL-----------KLFKGM 275
G + A F +M DLVTWN MI+G+ S+ +AL K+ KG
Sbjct: 453 LGKIDIAMRIFGKMEDR----DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 508
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+KPN++T+ +L + ++ G+EIHA + L DV GSAL+DMY+KCG L
Sbjct: 509 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ +R +F+ KNV +WN +I YG HG +I+L M+ +G++ NEVT ISV +AC
Sbjct: 569 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH G+V++GL IF MK YGV+ S +HYACVVD+L R+GR+ EAY L+ +P
Sbjct: 629 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNK-- 686
Query: 456 AGAFRN---GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
AGA+ + IH ++ + ++ +V+L+NI ++ G W +A +R+
Sbjct: 687 AGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRN 746
Query: 513 MKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
MKE+ V+K+PG S +E +E V K V +S
Sbjct: 747 MKEQGVRKEPGCSWIEHGDE-VHKFVAGDS 775
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 228/486 (46%), Gaps = 54/486 (11%)
Query: 14 NY-LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLK--SKLVGVYAGCGDVNSARLVF 70
NY LL + + GKQ+HA + + S+ + LV +Y CGD + VF
Sbjct: 97 NYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVF 156
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL--- 127
D+I N N ++ + ++ A+ F M + + FT V+ AC L
Sbjct: 157 DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+ GKQVHA + G N + N L+ MY K G L S++ + RD+V+W +++S
Sbjct: 217 GLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFS---- 238
C ++ EA+ M LEG+EP++FT ++++ + + R G A+A +
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 335
Query: 239 ----------------------RMTAEG-FVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
R +G F + WNAMI+G++Q++ + EAL LF GM
Sbjct: 336 ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 395
Query: 276 LVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
S G+ N+ T+ GV+ A +G+ IH V + GL D F + L+DMYS+ G
Sbjct: 396 EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 455
Query: 335 LKDARTLFEITRIKNVASWNAMIGCY--GKHG----MVDSSIELFERMLEEG-----MRA 383
+ A +F +++ +WN MI Y +H ++ ++ ER + +G ++
Sbjct: 456 IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 515
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFR-SMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
N +TL+++L +C+ + KG EI ++K ++ + +VDM + G + +
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG--SALVDMYAKCGCLQMSRK 573
Query: 443 LLRQVP 448
+ Q+P
Sbjct: 574 VFDQIP 579
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 180/360 (50%), Gaps = 47/360 (13%)
Query: 94 FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND-VSVGN 152
+EA+ + M + + + F +LKA L D++ GKQ+HA + G+ D V+V N
Sbjct: 78 LREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVAN 137
Query: 153 ALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEP 212
L+++Y KCG + +VF + ER+ VSW S+IS C+ K + A+ F M E +EP
Sbjct: 138 TLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEP 197
Query: 213 NQFTYNAIIASYA-------------------RRGDSN--------AAFAFFSRMTAEGF 245
+ FT +++ + + R+G+ N A + ++ +
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKV 257
Query: 246 V------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
+ DLVTWN ++S Q+++ EAL+ + M++ G++P+ T++ VL A
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 300 IQIGREIHALVCRMG-LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++ G+E+HA + G L + F GSAL+DMY C + R +F+ + + WNAMI
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 359 CYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACS-----------HGGLVEKGLE 406
Y ++ ++ LF M E G+ AN T+ V+ AC HG +V++GL+
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 208/456 (45%), Gaps = 60/456 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN---DLNIFSLKSKLVGVYAGCGDVNSARLVFDK 72
+ +L C + LR GK++HA N D N F + S LV +Y C V S R VFD
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGRRVFDG 363
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKK 131
+ + + + N M+ + + +EA+ F M E N T + V+ ACV +
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
+ +H + G + D V N L+DMYS+ G + A R+F M +RD+V+W +MI+GY
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 192 VSKVDEAVVLFERMK-LE----------GLEPNQFTYNAIIASYA-----RRGDSNAAFA 235
++A++L +M+ LE L+PN T I+ S A +G A+A
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543
Query: 236 FFSRMTAEGFV--------------------------PDLVTWNAMISGFAQSKRENEAL 269
+ + + V +++TWN +I + EA+
Sbjct: 544 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 603
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDM 328
L + M+V G+KPN VT V A +G + G R + + G+ + ++D+
Sbjct: 604 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL 663
Query: 329 YSKCGSLKDARTLFEITR--IKNVASWNAMIGCYGKHGMVD----SSIELFERMLEEGMR 382
+ G +K+A L + +W++++G H ++ ++ L + LE +
Sbjct: 664 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ--LEPNVA 721
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
++ V L ++ S+ GL +K E+ R+MKE+ GV+
Sbjct: 722 SHYVLLANIYSS---AGLWDKATEVRRNMKEQ-GVR 753
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 1/152 (0%)
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
W ++ +S EA+ + M+V GIKP+N +L+A +++G++IHA V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 312 RMGLHIDVFT-GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
+ G +D T + L+++Y KCG +F+ +N SWN++I + ++
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E F ML+E + + TL+SV++ACS+ + E
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 179/505 (35%), Positives = 266/505 (52%), Gaps = 44/505 (8%)
Query: 29 LRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+ G QVHA + L +L SK+V YA GD++S+ VF+ I P+ + N M+ A
Sbjct: 86 LKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRA 145
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
A G + + + M + + + FTF VLK+ V LL + GK VH + ++G + D
Sbjct: 146 YARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFD 205
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
+ V +LI +Y KCG + A +VF M RDV SW
Sbjct: 206 LYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSW------------------------- 240
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
NA++A Y + G +AA A F RM ++V+W MISG++QS +
Sbjct: 241 ----------NALLAGYTKSGCIDAALAIFERMPWR----NIVSWTTMISGYSQSGLAQQ 286
Query: 268 ALKLFKGMLV--SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
AL LF M+ SG++PN VT+ VL A +++ GR+IH L CRMGL+ + AL
Sbjct: 287 ALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIAL 346
Query: 326 IDMYSKCGSLKDARTLFE-ITR-IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
MY+KCGSL DAR F+ + R KN+ +WN MI Y +G ++ F M++ G++
Sbjct: 347 TAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQP 406
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
+++T +LS CSH GLV+ GL+ F M Y + EHYACV D+L R+GR+ EA L
Sbjct: 407 DDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKL 466
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ ++PM S+ G+ C H ++A T + F + +V+LSN+ A G W
Sbjct: 467 VGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRW 526
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVE 528
E + LR I+K + +K PG S +E
Sbjct: 527 QEVDKLRAIVKSQGTKKSPGCSWIE 551
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKI--PN 75
+L C + L +G+Q+H L C LN S+ L +YA CG + AR FDK+
Sbjct: 311 VLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNE 370
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGK 133
N+ N M+ A A G+ +A+ F M + + + TF+ +L C GL+D+ K
Sbjct: 371 KNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGL-K 429
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ ++T V + D+ + G L A ++
Sbjct: 430 YFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKL 466
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 194/570 (34%), Positives = 288/570 (50%), Gaps = 40/570 (7%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLC---TNDLNIFSLKSKLVGVYAGCGDVNSAR 67
LS N L L+ + ++ R G+ HA + N L F + + LV +Y+ NSA+
Sbjct: 4 LSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSF-IYNHLVNMYSKLDRPNSAQ 62
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
L+ PN +V ++ S G F A+ +FS MR + N FTF KA L
Sbjct: 63 LLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLR 122
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
GKQVHA+A + G +DV VG + DMYSK GL AR++F M ER++ +W + +S
Sbjct: 123 SPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLS 182
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII-----ASYARRGDSNAAFAFFSRMTA 242
+ D+A+ F + EG EPN T+ A + ASY R G F S A
Sbjct: 183 NSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEA 242
Query: 243 EGFV--------------------------PDLVTWNAMISGFAQSKRENEALKLFKGML 276
+ V P+ V+W +MI + Q+ E +A +F
Sbjct: 243 DVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRAR 302
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
GI+P + V+ VL A +++G+ +H L + + ++F GSAL+DMY KCGS++
Sbjct: 303 KEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIE 362
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR--ANEVTLISVLSA 394
DA F+ +N+ +WNAMIG Y G D ++ LF+ M R N VT + VLSA
Sbjct: 363 DAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSA 422
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS 454
CS G V G+EIF SM+ RYG++ EHYACVVD+L R+G + +AY ++++P+ T S
Sbjct: 423 CSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVS 482
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMK 514
+ GA + G+ +L + FE+ V+LSN+ AA G W EA +RK MK
Sbjct: 483 VWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMK 542
Query: 515 EKNVQKQPGFSRVEKRNE---FVEKEVQNE 541
+ ++K G S + N F K+ +E
Sbjct: 543 DVGIKKGAGCSWITAGNAVHVFQAKDTSHE 572
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 177/544 (32%), Positives = 295/544 (54%), Gaps = 45/544 (8%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C + +LR G+ VH + ++ SL + L+ +Y GD+ SA +F+ +P
Sbjct: 211 CSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCR--MTA 268
Query: 82 NWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
W M S + +G FQEA+ F+ M+EF N+ T VL AC L +K+G+ VH
Sbjct: 269 PWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFV 328
Query: 140 TQMGFENDVS-VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ + ++ +G AL+++Y+ G L +VF + E+ ++SW ++IS + + +EA
Sbjct: 329 IRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEA 388
Query: 199 VVLFERMKLEGLEP----------------------------------NQFTYNAIIASY 224
++LF +M+ +GL P N F NA+I Y
Sbjct: 389 LLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQNALIDMY 448
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
A+ G ++A F ++ + LVTWN+MI GF+Q+ EA+ LF M ++ +K +
Sbjct: 449 AKCGFVHSANKMFEKIKEKS----LVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDK 504
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
+T V+QA G ++ G+ +H + GL D + +AL DMYSKCG L+ A +F+
Sbjct: 505 LTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDR 564
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+++ SW+ MI YG HG ++++I LF +ML G++ N++T + +LSACSH G VE+G
Sbjct: 565 MSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEG 624
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
F SM E +GV+ +H+AC+VD+L R+G + AY ++ +P +S+ GA NGC
Sbjct: 625 KLYFNSMSE-FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCR 683
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
IH R D+ ++ + ++ + +LSNI A +G W + +R +MK K ++K PG+
Sbjct: 684 IHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGY 743
Query: 525 SRVE 528
S +E
Sbjct: 744 STIE 747
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 244/530 (46%), Gaps = 73/530 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKS-KLVGVYAGCGDVNSARLVFDKIPNPN 77
L +C S L Q+HA L L+ S KL+ YA G S++ VFD P P+
Sbjct: 7 LFRRCATSTTL---TQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPD 63
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR----CNKFTFSIVLKACVGLLDIKKGK 133
FM ++ + G F+EA+ SL E +Y+ + F F VLKAC G D+ G
Sbjct: 64 SFMWGVLIKCYVWGGFFEEAV---SLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGG 120
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+VH + GFE+D V +L+ MY + L A + F M RDVV+W+S++ +
Sbjct: 121 KVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNG 180
Query: 194 KVDEAVVLFERMKLEGLEPNQFTY-----------------------------------N 218
+ E + +F +M E +EP+ T N
Sbjct: 181 QASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNN 240
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
++I Y + GD +A F + P W MIS + QS EAL +F M
Sbjct: 241 SLIVMYGKLGDLYSAERLFENVPCRMTAP----WTPMISCYNQSGCFQEALNVFAKMQEF 296
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV-FTGSALIDMYSKCGSLKD 337
++PN VT+ GVL A G ++ GR +H V R + ++ F G AL+++Y+ G+L+D
Sbjct: 297 KMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRD 356
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+FE + K + SWN +I + ++G + ++ LF +M +G+ + +L S LSAC
Sbjct: 357 CHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGT 416
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHY-----ACVVDMLCRSGRMVEA---YDLLRQVPM 449
+ G +I +G I ++ ++DM + G + A ++ +++ +
Sbjct: 417 ISFSQLGAQI-------HGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSL 469
Query: 450 YVTNSMAGAF-RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
NSM F +NG ++ A+T+ ++ + M K D LS I A
Sbjct: 470 VTWNSMICGFSQNGYSVE-----AITLFDQMY-MNCVKMDKLTFLSVIQA 513
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 237/506 (46%), Gaps = 36/506 (7%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+++ L+ +Y ++ A FD +P +V + +V+ G E + FS M
Sbjct: 137 VETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEA 196
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ T V +AC L ++ G+ VH + E++ S+ N+LI MY K G L SA
Sbjct: 197 VEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAE 256
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR-- 226
R+F + R WT MIS Y EA+ +F +M+ +EPNQ T ++ + AR
Sbjct: 257 RLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLG 316
Query: 227 ---RGDSNAAFAFFSRMTAE---------------GFVPD------------LVTWNAMI 256
G S F M E G + D +++WN +I
Sbjct: 317 RVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLI 376
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
S F ++ + EAL LF M G+ P++ ++ L A G Q+G +IH + + G +
Sbjct: 377 SIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-N 435
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+ F +ALIDMY+KCG + A +FE + K++ +WN+MI + ++G +I LF++M
Sbjct: 436 FNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQM 495
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
++ +++T +SV+ ACSH G +EKG + + YG++ + DM + G
Sbjct: 496 YMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLI-MYGLRKDSYLDTALTDMYSKCGE 554
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSN 495
+ A+ + ++ S + G +HG+ + +++ + G++ D F+ + +
Sbjct: 555 LQMAHGVFDRMSERSIVSWS-VMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILS 613
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQ 521
C+ G E + M E V+ +
Sbjct: 614 ACSHAGAVEEGKLYFNSMSEFGVEPK 639
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 283/540 (52%), Gaps = 45/540 (8%)
Query: 28 ALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
L G+++H A N+F + + L+ +Y+ G AR +FD +P ++ N M+
Sbjct: 230 TLVDGRKIHCWAFKLGFQWNVF-VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMI 288
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
GN +A+ MR + N T +L C L DI +H + G E
Sbjct: 289 SGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLE 348
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
D+ V NALI+MY+K G L AR+ F MF DVVSW S+I+ Y A F +M
Sbjct: 349 FDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKM 408
Query: 206 KLEGLEPNQFTY------------------------------------NAIIASYARRGD 229
+L G +P+ T NA++ YA+ G
Sbjct: 409 QLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGL 468
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVT 288
++A F + V D+++WN +I+G+AQ+ +EA++++K M I PN T
Sbjct: 469 LDSAHKVFEIIP----VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWV 524
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
+L A G++Q G +IH V + LH+DVF + LID+Y KCG L DA +LF +
Sbjct: 525 SILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE 584
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+ +WNA+I C+G HG + +++LF ML+EG++ + VT +S+LSACSH G VE+G F
Sbjct: 585 SSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF 644
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
R M+E YG+K S +HY C+VD+L R+G + AYD ++ +P+ S+ GA C IHG
Sbjct: 645 RLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGN 703
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+L + FE+ + +V+LSNI A G+W + +R + +E+ ++K PG+S +E
Sbjct: 704 IELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIE 763
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 162/531 (30%), Positives = 273/531 (51%), Gaps = 53/531 (9%)
Query: 32 GKQVHALLCT-NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
K +HALL + + ++LV +YA GDV+ +R FD+IP +V+ N M+ A
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194
Query: 91 TGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
G+F EAIG ++ L+ R + +TF VLKAC L+D G+++H A ++GF+ +V
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVF 251
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE- 208
V +LI MYS+ G AR +F M RD+ SW +MISG +A+ + + M+LE
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 209 ----------------------------------GLEPNQFTYNAIIASYARRGDSNAAF 234
GLE + F NA+I YA+ G+ A
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F +M F+ D+V+WN++I+ + Q+ A F M ++G +P+ +T+ +
Sbjct: 372 KAFQQM----FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIV 427
Query: 295 GLTGSIQIGREIHALVCRMG-LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
+ + R +H + R G L DV G+A++DMY+K G L A +FEI +K+V SW
Sbjct: 428 AQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISW 487
Query: 354 NAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSACSHGGLVEKGLEIF-RSM 411
N +I Y ++G+ +IE+++ M E + + N+ T +S+L A +H G +++G++I R +
Sbjct: 488 NTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVI 547
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
K + + C++D+ + GR+V+A L QVP ++ A + IHG +
Sbjct: 548 KTNLHLDVFVA--TCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCHGIHGHAEK 604
Query: 472 AVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+ + E + G+ KPD FV L + C+ G E + ++M+E ++
Sbjct: 605 TLKLFGEMLDEGV-KPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKP 654
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 295/550 (53%), Gaps = 34/550 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C + +GK +H L D + FS + LV +YA GD+ A VF+KI
Sbjct: 261 LSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANA-LVDMYAKVGDLADAISVFEKI 319
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P++ N ++ + ++A+ M+ N FT S LKAC G+ + G+
Sbjct: 320 KQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGR 379
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H+ +M E+D+ V L+DMYSKC LL AR F+ + E+D+++W ++ISGY
Sbjct: 380 QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYW 439
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYA----------------RRGDSNAAFAFF 237
+ EA+ LF M EG+ NQ T + I+ S A + G + +
Sbjct: 440 EDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVN 499
Query: 238 S---------------RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
S R+ E + DLV++ +MI+ +AQ + EALKLF M +KP
Sbjct: 500 SLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKP 559
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ + +L A + + G+++H + + G +D+F G++L++MY+KCGS+ DA F
Sbjct: 560 DRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAF 619
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ + SW+AMIG +HG +++LF +ML+EG+ N +TL+SVL AC+H GLV
Sbjct: 620 SELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVT 679
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+ F SM+E +G K +EHYAC++D+L R+G++ EA +L+ ++P S+ GA
Sbjct: 680 EAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA 739
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
IH +L E F + K V+L+NI A+ G+W +R++M++ V+K+P
Sbjct: 740 ARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEP 799
Query: 523 GFSRVEKRNE 532
G S +E +++
Sbjct: 800 GMSWIEVKDK 809
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 164/548 (29%), Positives = 277/548 (50%), Gaps = 68/548 (12%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVF 70
SV+Y LL +C +K+LR G Q+HA + + L + S+++ L+ +Y+ C + AR +
Sbjct: 56 SVSYSK-LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLV 114
Query: 71 DKIPNPNVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
D+ P+ +++W + S + N A+ F M +CN+FTFS VLKAC + D
Sbjct: 115 DESSEPD--LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKD 172
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
++ GKQVH V GFE DV V N L+ MY+KC ++R+F + ER+VVSW ++ S
Sbjct: 173 LRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSC 232
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------------- 217
Y + EAV LF M L G++PN+F+
Sbjct: 233 YVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWD 292
Query: 218 ----NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
NA++ YA+ GD A + F ++ PD+V+WNA+I+G + +AL+L
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQ----PDIVSWNAVIAGCVLHEHHEQALELLG 348
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
M SGI PN T++ L+A G ++GR++H+ + +M + D+F L+DMYSKC
Sbjct: 349 QMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCD 408
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
L+DAR F + K++ +WNA+I Y ++ ++ LF M +EG+ N+ TL ++L
Sbjct: 409 LLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILK 468
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYA------CVVDMLCRSGRMVEAYDLLRQV 447
+ + GL++ ++ +G+ + ++ ++D + + +A + +
Sbjct: 469 STA-------GLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEEC 521
Query: 448 P---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV--MLSNICAADGE 502
+ SM A+ +G+ + A+ + E +M L KPD FV L N CA
Sbjct: 522 TIGDLVSFTSMITAYAQ----YGQGEEALKLFLEMQDMEL-KPDRFVCSSLLNACANLSA 576
Query: 503 WHEAENLR 510
+ + + L
Sbjct: 577 FEQGKQLH 584
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 161/331 (48%), Gaps = 11/331 (3%)
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
G F VS++ ++S C + + + + GL + N +I Y++ +
Sbjct: 50 GNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRN--- 106
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
F + ++ E PDLV+W+A+ISG+AQ+ AL F M + G+K N T + VL+
Sbjct: 107 -FGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLK 165
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A + ++IG+++H +V G DVF + L+ MY+KC D++ LF+ +NV S
Sbjct: 166 ACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVS 225
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
WNA+ CY + ++ LF M+ G++ NE +L S+++AC+ +G +I
Sbjct: 226 WNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRG-KIIHGYL 284
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV--PMYVTNSMAGAFRNGCNIHGRRD 470
+ G +VDM + G + +A + ++ P V+ A GC +H +
Sbjct: 285 IKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVS---WNAVIAGCVLHEHHE 341
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
A+ + + G+ P+ F + S + A G
Sbjct: 342 QALELLGQMKRSGI-CPNIFTLSSALKACAG 371
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 197/572 (34%), Positives = 301/572 (52%), Gaps = 68/572 (11%)
Query: 27 KALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+ L GKQVHA L +LN F + + LV +Y G + S++++ + ++ W
Sbjct: 129 EGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRD--LVTWNT 185
Query: 86 MASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
+ S+ N Q EA+ Y M ++FT S VL AC L ++ GK++HA A + G
Sbjct: 186 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 245
Query: 144 -FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
+ + VG+AL+DMY C + S RRVF GMF+R + W +MI+GY EA++LF
Sbjct: 246 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 305
Query: 203 ERMK------------------------------------LEGLEPNQFTYNAIIASYAR 226
M+ GL+ ++F N ++ Y+R
Sbjct: 306 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 365
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL-----------KLFKGM 275
G + A F +M DLVTWN MI+G+ S+ +AL K+ KG
Sbjct: 366 LGKIDIAMRIFGKMEDR----DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 421
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+KPN++T+ +L + ++ G+EIHA + L DV GSAL+DMY+KCG L
Sbjct: 422 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 481
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ +R +F+ KNV +WN +I YG HG +I+L M+ +G++ NEVT ISV +AC
Sbjct: 482 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 541
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT--- 452
SH G+V++GL IF MK YGV+ S +HYACVVD+L R+GR+ EAY L+ +P
Sbjct: 542 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG 601
Query: 453 --NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR 510
+S+ GA R IH ++ + ++ +V+L+NI ++ G W +A +R
Sbjct: 602 AWSSLLGASR----IHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVR 657
Query: 511 KIMKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
+ MKE+ V+K+PG S +E +E V K V +S
Sbjct: 658 RNMKEQGVRKEPGCSWIEHGDE-VHKFVAGDS 688
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 228/486 (46%), Gaps = 54/486 (11%)
Query: 14 NY-LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLK--SKLVGVYAGCGDVNSARLVF 70
NY LL + + GKQ+HA + + S+ + LV +Y CGD + VF
Sbjct: 10 NYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVF 69
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL--- 127
D+I N N ++ + ++ A+ F M + + FT V+ AC L
Sbjct: 70 DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 129
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+ GKQVHA + G N + N L+ MY K G L S++ + RD+V+W +++S
Sbjct: 130 GLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 188
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFS---- 238
C ++ EA+ M LEG+EP++FT ++++ + + R G A+A +
Sbjct: 189 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 248
Query: 239 ----------------------RMTAEG-FVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
R +G F + WNAMI+G++Q++ + EAL LF GM
Sbjct: 249 ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 308
Query: 276 LVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
S G+ N+ T+ GV+ A +G+ IH V + GL D F + L+DMYS+ G
Sbjct: 309 EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 368
Query: 335 LKDARTLFEITRIKNVASWNAMIGCY--GKHG----MVDSSIELFERMLEEG-----MRA 383
+ A +F +++ +WN MI Y +H ++ ++ ER + +G ++
Sbjct: 369 IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 428
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFR-SMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
N +TL+++L +C+ + KG EI ++K ++ + +VDM + G + +
Sbjct: 429 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG--SALVDMYAKCGCLQMSRK 486
Query: 443 LLRQVP 448
+ Q+P
Sbjct: 487 VFDQIP 492
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 174/344 (50%), Gaps = 47/344 (13%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND-VSVGNALIDMYSKCGLLCSAR 168
+ + + F +LKA L D++ GKQ+HA + G+ D V+V N L+++Y KCG +
Sbjct: 7 KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY 66
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA--- 225
+VF + ER+ VSW S+IS C+ K + A+ F M E +EP+ FT +++ + +
Sbjct: 67 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 126
Query: 226 ----------------RRGDSN--------AAFAFFSRMTAEGFV------PDLVTWNAM 255
R+G+ N A + ++ + + DLVTWN +
Sbjct: 127 MPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 186
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG- 314
+S Q+++ EAL+ + M++ G++P+ T++ VL A ++ G+E+HA + G
Sbjct: 187 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 246
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L + F GSAL+DMY C + R +F+ + + WNAMI Y ++ ++ LF
Sbjct: 247 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 306
Query: 375 RMLEE-GMRANEVTLISVLSACS-----------HGGLVEKGLE 406
M E G+ AN T+ V+ AC HG +V++GL+
Sbjct: 307 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 350
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 205/452 (45%), Gaps = 59/452 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN---DLNIFSLKSKLVGVYAGCGDVNSARLVFDK 72
+ +L C + LR GK++HA N D N F + S LV +Y C V S R VFD
Sbjct: 218 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGRRVFDG 276
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKK 131
+ + + + N M+ + + +EA+ F M E N T + V+ ACV +
Sbjct: 277 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 336
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
+ +H + G + D V N L+DMYS+ G + A R+F M +RD+V+W +MI+GY
Sbjct: 337 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 396
Query: 192 VSKVDEAVVLFERMK-LE----------GLEPNQFTYNAIIASYA-----RRGDSNAAFA 235
++A++L +M+ LE L+PN T I+ S A +G A+A
Sbjct: 397 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 456
Query: 236 FFSRMTAEGFV--------------------------PDLVTWNAMISGFAQSKRENEAL 269
+ + + V +++TWN +I + EA+
Sbjct: 457 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 516
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDM 328
L + M+V G+KPN VT V A +G + G R + + G+ + ++D+
Sbjct: 517 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL 576
Query: 329 YSKCGSLKDARTLFEITR--IKNVASWNAMIGCYGKHGMVD----SSIELFERMLEEGMR 382
+ G +K+A L + +W++++G H ++ ++ L + LE +
Sbjct: 577 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ--LEPNVA 634
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
++ V L ++ S+ GL +K E+ R+MKE+
Sbjct: 635 SHYVLLANIYSS---AGLWDKATEVRRNMKEQ 663
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT-GSALIDMYSKCG 333
M+V GIKP+N +L+A +++G++IHA V + G +D T + L+++Y KCG
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
+F+ +N SWN++I + ++E F ML+E + + TL+SV++
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 394 ACSHGGLVE 402
ACS+ + E
Sbjct: 121 ACSNLPMPE 129
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/576 (31%), Positives = 290/576 (50%), Gaps = 55/576 (9%)
Query: 5 IFPINNLSVNY-----LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAG 59
IF N + N+ L LL +C +K L +Q+H + ++ + L+
Sbjct: 8 IFKTINTNTNHSPIFLLLSLLKQCPSTKTL---QQIHTQFTIHSIH---KPNHLLSQSIS 61
Query: 60 CGDVNSARLVFDKI-PNPNVFMLNWMVMASAFT-GNFQEAIGYFSLMREFIYRCNKFTFS 117
D + L+F I P+PN + N M+ A+ T ++ + + M+ N FTF
Sbjct: 62 LKDFTYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFP 121
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
V AC L +I+ + H ++G +ND N+++ MY +CG AR+VF + E+
Sbjct: 122 FVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEK 181
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLE-GLEP------------------------ 212
D+VSW S++SGY + EAV +F R++ E G EP
Sbjct: 182 DLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWV 241
Query: 213 -----------NQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
N + +A+I+ Y++ G+ ++ F M + D +TWNA IS +AQ
Sbjct: 242 EGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSR----DFITWNAAISAYAQ 297
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
+ +EA+ LF M +G+ PN VT+T VL A G++ +G+++ GL D+F
Sbjct: 298 NGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFV 357
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG- 380
+ALIDMY+KCGSL+ A+ +F KN ASWNAMI HG ++ LFERM +EG
Sbjct: 358 ATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGG 417
Query: 381 -MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
R N++T +S+LSAC H GLV++G +F M +G+ EHY+C+VD+L R+G + E
Sbjct: 418 SARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYE 477
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A+D++ ++P N GA + C D+ + + E+ +++ S I
Sbjct: 478 AWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYEN 537
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
W +A +R +M+E V K PG S +E N+ E
Sbjct: 538 LNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLRE 573
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/576 (31%), Positives = 290/576 (50%), Gaps = 55/576 (9%)
Query: 5 IFPINNLSVNY-----LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAG 59
IF N + N+ L LL +C +K L +Q+H + ++ + L+
Sbjct: 8 IFKTINTNTNHSPIFLLLSLLKQCPSTKTL---QQIHTQFTIHSIHK---PNHLLSQSIS 61
Query: 60 CGDVNSARLVFDKI-PNPNVFMLNWMVMASAFT-GNFQEAIGYFSLMREFIYRCNKFTFS 117
D + L+F I P+PN + N M+ A+ T ++ + + M+ N FTF
Sbjct: 62 LKDFTYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFP 121
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
V AC L +I+ + H ++G +ND N+++ MY +CG AR+VF + E+
Sbjct: 122 FVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEK 181
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLE-GLEP------------------------ 212
D+VSW S++SGY + EAV +F R++ E G EP
Sbjct: 182 DLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWV 241
Query: 213 -----------NQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
N + +A+I+ Y++ G+ ++ F M + D +TWNA IS +AQ
Sbjct: 242 EGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSR----DFITWNAAISAYAQ 297
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
+ +EA+ LF M +G+ PN VT+T VL A G++ +G+++ GL D+F
Sbjct: 298 NGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFV 357
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG- 380
+ALIDMY+KCGSL+ A+ +F KN ASWNAMI HG ++ LFERM +EG
Sbjct: 358 ATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGG 417
Query: 381 -MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
R N++T +S+LSAC H GLV++G +F M +G+ EHY+C+VD+L R+G + E
Sbjct: 418 SARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYE 477
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A+D++ ++P N GA + C D+ + + E+ +++ S I
Sbjct: 478 AWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYEN 537
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
W +A +R +M+E V K PG S +E N+ E
Sbjct: 538 LNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLRE 573
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/480 (34%), Positives = 270/480 (56%), Gaps = 4/480 (0%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
++ +YA G V R++FD +P+ + N ++ A G A+G F M++ +
Sbjct: 95 MLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPT 154
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
++T VL AC LLD+++GKQ+H +V V NAL D+Y++CG + ARR+F
Sbjct: 155 EYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFD 214
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
M R+VV+W MISGY + ++ + LF M++ L+P+Q T ++++ +Y + G +
Sbjct: 215 RMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDE 274
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
A F + + D V W MI G AQ+ +E +AL LF ML+ +P+ T++ V+
Sbjct: 275 ARKVFGEIREK----DEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVS 330
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
+ S+ G+ +H MG++ D+ SAL+DMY KCG +DA T+F + +NV S
Sbjct: 331 SCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVS 390
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
WN+MIG Y +G ++ L+E MLEE ++ + VT + VLSAC H GLVE+G E F SM
Sbjct: 391 WNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMS 450
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLA 472
+++G++ + +HYAC+V++ RSG M +A DL+ + + + + C + G
Sbjct: 451 DQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHG 510
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
E+ ++MLSN+ AA G W + ++R +MK K+V+K +S +E NE
Sbjct: 511 EMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNE 570
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 152/309 (49%), Gaps = 11/309 (3%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
S ++G Y G ++ AR VF +I + M++ A G ++A+ FS M R
Sbjct: 260 SSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENAR 319
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ +T S V+ +C L + G+ VH A MG +D+ V +AL+DMY KCG+ A +
Sbjct: 320 PDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTI 379
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M R+VVSW SMI GY + EA+ L+E M E L+P+ T+ ++++ G
Sbjct: 380 FSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLV 439
Query: 231 NAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+F M+ + G P + M++ F +S ++A+ L M +PN++ T
Sbjct: 440 EEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSM---SQEPNSLIWTT 496
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI---DMYSKCGSLKDARTLFEITR 346
VL + G I+ G + R + ++ F I +MY+ G KD ++ + +
Sbjct: 497 VLSVCVMKGDIKHGE----MAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMK 552
Query: 347 IKNVASWNA 355
K+V ++A
Sbjct: 553 SKHVKKFSA 561
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 179/425 (42%), Gaps = 114/425 (26%)
Query: 19 LLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + LR+GKQ+H ++C N+F + L +YA CG+++ AR +FD++
Sbjct: 161 VLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNA-LTDLYARCGEIDQARRLFDRMVIR 219
Query: 77 NVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NV + W +M S + N Q + I F M+ + ++ T S VL A
Sbjct: 220 NV--VTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA------------ 265
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
Y + G + AR+VF + E+D V WT MI G K
Sbjct: 266 -----------------------YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGK 302
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------------- 223
++A++LF M LE P+ +T +++++S
Sbjct: 303 EEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSA 362
Query: 224 ----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
Y + G + A+ FS M ++V+WN+MI G+A + ++ EAL L++ ML
Sbjct: 363 LVDMYCKCGVTRDAWTIFSTMQTR----NVVSWNSMIGGYALNGQDLEALSLYENMLEEN 418
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+KP++VT GVL A G ++ G+E C M D D Y+
Sbjct: 419 LKPDSVTFVGVLSACVHAGLVEEGKE---YFCSMS---DQHGLEPTPDHYA--------- 463
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
M+ +G+ G +D +++L M +E N + +VLS C G
Sbjct: 464 ---------------CMVNLFGRSGHMDKAVDLISSMSQE---PNSLIWTTVLSVCVMKG 505
Query: 400 LVEKG 404
++ G
Sbjct: 506 DIKHG 510
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 77/143 (53%), Gaps = 5/143 (3%)
Query: 266 NEALKLFKGMLVSGIKPNNVTVTG-VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
++A +L M + KPN+ + +L +G I R++ + + D F+ +A
Sbjct: 39 DQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQR----DNFSWNA 94
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
++ +Y+K G ++D R +F+ ++ S+N +I + +G ++ +F RM +EG++
Sbjct: 95 MLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPT 154
Query: 385 EVTLISVLSACSHGGLVEKGLEI 407
E T +SVL+AC+ + +G +I
Sbjct: 155 EYTHVSVLNACTQLLDLRRGKQI 177
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 7/177 (3%)
Query: 16 LDCLLGKCMKSKALRQGKQVHA---LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDK 72
+ ++ C K +L G+ VH L+ ND + S S LV +Y CG A +F
Sbjct: 325 ISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVS--SALVDMYCKCGVTRDAWTIFST 382
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ NV N M+ A G EA+ + M E + + TF VL ACV +++G
Sbjct: 383 MQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEG 442
Query: 133 KQVH-AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF-ERDVVSWTSMIS 187
K+ +++ Q G E +++++ + G + A + M E + + WT+++S
Sbjct: 443 KEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLS 499
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/549 (32%), Positives = 283/549 (51%), Gaps = 43/549 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCT--NDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPN 75
LL C + QVHA D N F ++ + L+ Y ++ A ++F++IP
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+ N ++ G + E+I F MR+ ++ + FTFS VLKA VGL D G+Q+
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA++ GF D SVGN ++D YSK + R +F M E D VS+ +IS Y +
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 196 DEAVVLFERMKLEGLEPNQFTY-----------------------------------NAI 220
+ ++ F M+ G + F + N++
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSL 392
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
+ YA+ A F + V+W A+ISG+ Q LKLF M S +
Sbjct: 393 VDMYAKCEMFEEAELIFKSLPQRT----TVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+ + T VL+A S+ +G+++HA + R G +VF+GS L+DMY+KCGS+KDA
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQ 508
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+FE +N SWNA+I + +G +++I F +M+E G++ + V+++ VL+ACSH G
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGF 568
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
VE+G E F++M YG+ K+HYAC++D+L R+GR EA L+ ++P M +
Sbjct: 569 VEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Query: 461 NGCNIHGRRDLAVTMGEEFFEM-GLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
N C IH + LA E+ F M LR +V +SNI AA GEW + +++K M+E+ ++
Sbjct: 629 NACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688
Query: 520 KQPGFSRVE 528
K P +S VE
Sbjct: 689 KVPAYSWVE 697
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 200/438 (45%), Gaps = 50/438 (11%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYR 110
++ + GDV+SAR +FD +P+ V + W ++ + N F EA F L R+
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTV--VTWTILMGWYARNSHFDEA---FKLFRQMCRS 139
Query: 111 C-----NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND--VSVGNALIDMYSKCGL 163
+ TF+ +L C + QVHA A ++GF+ + ++V N L+ Y +
Sbjct: 140 SSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRR 199
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
L A +F + E+D V++ ++I+GY E++ LF +M+ G +P+ FT++ ++ +
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 224 YARRGD----------------------SNAAFAFFSR---------MTAEGFVPDLVTW 252
D N F+S+ + E D V++
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N +IS ++Q+ + +L F+ M G N +L S+Q+GR++H
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
+ G++L+DMY+KC ++A +F+ + SW A+I Y + G+ + ++L
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 373 FERMLEEGMRANEVTLISVLSACSHGG--LVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
F +M +RA++ T +VL A + L+ K L F R G + + +VDM
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFII---RSGNLENVFSGSGLVDM 496
Query: 431 LCRSGRMVEAYDLLRQVP 448
+ G + +A + ++P
Sbjct: 497 YAKCGSIKDAVQVFEEMP 514
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 164/388 (42%), Gaps = 58/388 (14%)
Query: 128 DIKKGKQVHA---VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
D+ + QV A V +M +N VS N +I + K G + SAR +F M +R VV+WT
Sbjct: 57 DLLRRGQVSAARKVYDEMPHKNTVST-NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTI 115
Query: 185 MISGYCNVSKVDEAVVLFERM--------------------------------------K 206
++ Y S DEA LF +M K
Sbjct: 116 LMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVK 175
Query: 207 LEGLEPNQF--TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
L G + N F N ++ SY + A F + + D VT+N +I+G+ +
Sbjct: 176 L-GFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK----DSVTFNTLITGYEKDGL 230
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
E++ LF M SG +P++ T +GVL+A +G+++HAL G D G+
Sbjct: 231 YTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQ 290
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
++D YSK + + R LF+ + S+N +I Y + ++S+ F M G
Sbjct: 291 ILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRR 350
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA-CVVDMLCRSGRMVEAYDL 443
++LS ++ ++ G ++ + S H +VDM + EA +
Sbjct: 351 NFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFEEAELI 408
Query: 444 LRQVPMYVTNS----MAGAFRNGCNIHG 467
+ +P T S ++G + G +HG
Sbjct: 409 FKSLPQRTTVSWTALISGYVQKG--LHG 434
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 117/266 (43%), Gaps = 43/266 (16%)
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
++V A + GF+ D N +++ + G + +AR+V+ M ++ VS +MISG+
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM--TAEGFVPDLV 250
V A LF+ M + T+ ++ YAR + AF F +M ++ +PD V
Sbjct: 93 GDVSSARDLFDAMP----DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
T+ ++ G N+A+ P N +G ++HA
Sbjct: 149 TFTTLLPGC------NDAV------------PQNA----------------VG-QVHAFA 173
Query: 311 CRMGLHIDVF--TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
++G + F + L+ Y + L A LFE K+ ++N +I Y K G+
Sbjct: 174 VKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTE 233
Query: 369 SIELFERMLEEGMRANEVTLISVLSA 394
SI LF +M + G + ++ T VL A
Sbjct: 234 SIHLFLKMRQSGHQPSDFTFSGVLKA 259
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/557 (31%), Positives = 281/557 (50%), Gaps = 54/557 (9%)
Query: 10 NLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
N VNY + L G +K T +N + S L+ +Y G + R V
Sbjct: 129 NSDVNYGELLHGYAVK---------------TGLVNSVFVGSALLDMYTKNGKIFEGRRV 173
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
F ++P NV ++ G +EA+ YFS M + +TF+I LKAC +
Sbjct: 174 FHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGAL 233
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
G+++HA A + GF+ V N L MY+KCG L +F M RDVVSWT++I+
Sbjct: 234 NYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTL 293
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------------- 217
+ + + AV F RM+ + PN++T+
Sbjct: 294 VQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASL 353
Query: 218 ---NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
N+I+ YA+ G ++ F MT D+V+W+ +I+G++Q +EA +L
Sbjct: 354 SVENSIMTMYAKCGQLTSSSVIFHEMTRR----DIVSWSTIIAGYSQGGHVSEAFELLSW 409
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M + G KP + VL A G ++ G+++HA V +GL SALI+MY KCGS
Sbjct: 410 MRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGS 469
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
+++A +F+ ++ SW AMI Y +HG I+LFE++ G+R + VT I VLSA
Sbjct: 470 IEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSA 529
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS 454
CSH GLV+ G F +M ++Y + SKEHY C++D+LCR+GR+ +A ++ +P + +
Sbjct: 530 CSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDV 589
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMK 514
+ C +HG + E ++ + L+NI A+ G+W EA ++RK+MK
Sbjct: 590 VWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMK 649
Query: 515 EKNVQKQPGFSRVEKRN 531
K V K+PG+S ++ ++
Sbjct: 650 SKGVIKEPGWSWIKVKD 666
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 228/485 (47%), Gaps = 57/485 (11%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAF--TGNFQEAIGYFSLMR-EFIYRCNKFTFS 117
G + +AR +FDK+ + ++W + S + + EA+ F MR E R + F S
Sbjct: 63 GHLGNARRMFDKMSQKD--EISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
+ KAC D+ G+ +H A + G N V VG+AL+DMY+K G + RRVFH M R
Sbjct: 121 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 180
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
+VVSWT++I+G EA+V F M +E + +T+ + + A G N
Sbjct: 181 NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIH 240
Query: 238 SRMTAEGF-------------------------------VPDLVTWNAMISGFAQSKREN 266
++ +GF + D+V+W +I+ Q +E
Sbjct: 241 AQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 300
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
A++ F M S + PN T V+ I+ G ++HAL+ +GL + ++++
Sbjct: 301 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIM 360
Query: 327 DMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
MY+KCG L + +F E+TR +++ SW+ +I Y + G V + EL M EG + E
Sbjct: 361 TMYAKCGQLTSSSVIFHEMTR-RDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTE 419
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV----VDMLCRSGRMVEA- 440
L SVLSAC + ++E G ++ Y + I EH A V ++M C+ G + EA
Sbjct: 420 FALASVLSACGNMAILEHGKQL-----HAYVLSIGLEHTAMVLSALINMYCKCGSIEEAS 474
Query: 441 --YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNI 496
+D + +M NG HG + + E+ +GLR PD F+ + +
Sbjct: 475 RIFDAAENDDIVSWTAMI----NGYAEHGYSREVIDLFEKIPRVGLR-PDSVTFIGVLSA 529
Query: 497 CAADG 501
C+ G
Sbjct: 530 CSHAG 534
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 160/328 (48%), Gaps = 33/328 (10%)
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+ D+ N + K G L +ARR+F M ++D +SWT++ISGY N + EA++LF+
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105
Query: 205 MKLE-GLEPNQF---------------TYNAIIASYA-RRGDSNAAF---AFFSRMTAEG 244
M++E GL + F Y ++ YA + G N+ F A T G
Sbjct: 106 MRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165
Query: 245 FV----------P--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
+ P ++V+W A+I+G ++ EAL F M S ++ ++ T L+
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALK 225
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A +G++ GREIHA + G + F + L MY+KCG L+ TLFE +++V S
Sbjct: 226 ACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVS 285
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
W +I + G + +++ F RM E + NE T +V+S C++ +E G E ++
Sbjct: 286 WTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWG-EQLHALI 344
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEA 440
G+ S ++ M + G++ +
Sbjct: 345 LHLGLAASLSVENSIMTMYAKCGQLTSS 372
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 287/530 (54%), Gaps = 49/530 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDV---NSARLVFDKIP 74
+L +C +L Q K+VHA + +L S + +KL+ + V + RL+F ++
Sbjct: 14 ILERC---SSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLH 70
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
PN F ++ A A G +A+ ++S MR+ FTFS + AC + G Q
Sbjct: 71 TPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQ 130
Query: 135 VHAVATQMG-FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+HA +G F +D+ V NA+IDMY KCG L AR VF M ERDV+SWT
Sbjct: 131 LHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWT---------- 180
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
+I +Y R GD AA F + V D+VTW
Sbjct: 181 -------------------------GLIVAYTRIGDMRAARDLFDGLP----VKDMVTWT 211
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
AM++G+AQ+ +AL++F+ + G++ + VT+ GV+ A G+ + I +
Sbjct: 212 AMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIRDIAESS 271
Query: 314 GLHI--DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
G + +V GSALIDMYSKCG++++A +F+ R +NV S+++MI + HG ++I+
Sbjct: 272 GFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFAIHGRARAAIK 331
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LF MLE G++ N VT + VL+ACSH GLV++G ++F SM++ YGV + E YAC+ D+L
Sbjct: 332 LFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELYACMTDLL 391
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
R+G + +A L+ +PM ++ GA ++HG D+A + FE+ ++
Sbjct: 392 SRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIASKRLFELEPDNIGNYL 451
Query: 492 MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNE 541
+LSN A+ G W + +RK+++EKN++K PG+S VE +N + K V +
Sbjct: 452 LLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKNGMIHKFVAGD 501
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/530 (33%), Positives = 283/530 (53%), Gaps = 19/530 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN---IFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
LL C ++L+ KQVHA +C L+ I + K L + ++ AR +F PN
Sbjct: 11 LLTNC---RSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPN 67
Query: 76 PNVFMLNWMVMASAFTGNFQEA-IGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
P+VFM N ++ A + Q + I + + R + F+F+ +LKA ++ G Q
Sbjct: 68 PDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQ 127
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H A G + + VG L+ MYS+CG + A++VF MFE +VV+W ++++
Sbjct: 128 LHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGD 187
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
V A ++F RM L ++N ++A Y + G+ A F M V D V+W+
Sbjct: 188 VKGADMMFNRMPFRNLT----SWNVMLAGYTKAGELELARKLFLEMP----VKDDVSWST 239
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MI GFA + EA F+ + G++PN V++TG L A G+I+ G+ +H + + G
Sbjct: 240 MIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSG 299
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFE-ITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
V +AL+D YSKCG++ AR +FE + +++ SW +MI HG + +I+LF
Sbjct: 300 FLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLF 359
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
M E G+R + + IS+L ACSH GL+EKG E F MK+ Y ++ + EHY C+VD+ R
Sbjct: 360 HEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGR 419
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G++ +AY+ + +P+ T + C+IHG LA + E E+ V+L
Sbjct: 420 AGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLL 479
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFVEKEVQN 540
SNI A G+W + +R+ M ++ + K PG+S +E FV EVQN
Sbjct: 480 SNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQN 529
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 296/581 (50%), Gaps = 65/581 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C SK+L GK+VH+++ +N++ + L KLV +YA CGD+ R VFD + N
Sbjct: 105 VLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKN 164
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMRE--------------FIYRCNKFTFSI----- 118
V++ N+MV A G+F+E+I F +M E F C++ S
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMIS 224
Query: 119 --------------------------------VLKACVGLLDIKKGKQVHAVATQMGFEN 146
VL C + GK VH++A + FE
Sbjct: 225 GYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFER 284
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
++ N L+DMYSKCG L A RVF M ER+VVSWTSMI+GY + D A+ L ++M+
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQME 344
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
EG++ + +I+ + AR G + + A +L NA++ + + +
Sbjct: 345 KEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMD 404
Query: 267 EALKLFKGMLVSGI----------KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
A +F M+V I KP++ T+ +L A +++ G+EIH + R G
Sbjct: 405 GANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYS 464
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
D +AL+D+Y KCG L AR LF++ K++ SW MI YG HG + +I F M
Sbjct: 465 SDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEM 524
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
+ G+ +EV+ IS+L ACSH GL+E+G F MK + ++ EHYAC+VD+L R+G
Sbjct: 525 RDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGN 584
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
+ +AY+ + +P+ ++ GA GC I+ +LA + E FE+ +V+L+NI
Sbjct: 585 LSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANI 644
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFV 534
A +W E + +R+ + +K ++K PG S +E K N FV
Sbjct: 645 YAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFV 685
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 165/325 (50%), Gaps = 24/325 (7%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
T+S VL+ C G + GK+VH++ D +G L+ +Y+ CG L RRVF M
Sbjct: 101 TYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTM 160
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
+++V W M+S Y + E++ LF+ M +G+E +R +S A
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE-------------GKRPES--AS 205
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F ++ D+++WN+MISG+ + L+++K M+ GI + T+ VL
Sbjct: 206 ELFDKLCDR----DVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGC 261
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
+G++ +G+ +H+L + + + L+DMYSKCG L A +FE +NV SW
Sbjct: 262 ANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
+MI Y + G D +I L ++M +EG++ + V S+L AC+ G ++ G ++ +K
Sbjct: 322 SMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKAN 381
Query: 415 YGVKISKEHYAC--VVDMLCRSGRM 437
+ + C ++DM + G M
Sbjct: 382 ---NMESNLFVCNALMDMYTKCGSM 403
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/583 (31%), Positives = 297/583 (50%), Gaps = 78/583 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN--IFSLKSKLV--GVYAGCGDVNSARLVFDKIP 74
LL KC +++R KQ+HA + L+ +F+L SKL+ + GD++ A +F+ I
Sbjct: 35 LLSKC---QSIRTFKQIHAHIIKTGLHNTLFAL-SKLIEFSAVSRSGDISYAISLFNSIE 90
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
PN+F+ N M+ + + + A+ +F M N +TF +LK+C L +GKQ
Sbjct: 91 EPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQ 150
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCG-------------------------------L 163
+HA ++GF +DV + +LI+MY++ G
Sbjct: 151 IHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGY 210
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT------- 216
+ AR++F M +DVVSW +MI+GY + + EA++LFE M+ + PN+ T
Sbjct: 211 MDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSA 270
Query: 217 ----------------------------YNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
NA+I Y++ GD A F M D
Sbjct: 271 CAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLER----D 326
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
+++WN MI G+ EAL LF+ ML SG++P +T +L + G+I +G+ IHA
Sbjct: 327 VISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHA 386
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
+ + + ++LID+Y+KCG++ AR +F+ +IK++ASWNAMI HG D
Sbjct: 387 YINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADK 446
Query: 369 SIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
+ ELF +M +G+ NE+T + +LSAC H GLV+ G + F SM + Y + +HY C++
Sbjct: 447 AFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMI 506
Query: 429 DMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
D+L R+G EA LL+ + + ++ G+ C HGR +L + E FE+ P
Sbjct: 507 DLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPG 566
Query: 489 GFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+V+LSNI A G+W + +R + ++ ++K PG + +E N
Sbjct: 567 AYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDN 609
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 269/476 (56%), Gaps = 14/476 (2%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM----REFIYRCNKFTF 116
G + A LVFD+IP P+ FM N ++ +A T ++A+ ++ M R +K TF
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 117 SIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE 176
VL+AC + G QVHA + G E+D V NALI M++ CG L A +F G
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAF 236
D V+W++MI+G + A LF+ ++ L ++N +I +YA+RGD A
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDL----VSWNVMITAYAKRGDMALAREL 201
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F ++ D+V+WN MISG+ + AL+LF+ M G KP+ VT+ +L A
Sbjct: 202 FDQVPER----DVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACAD 257
Query: 297 TGSIQIGREIHALVCRMGLH--IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
+G + +G+ +H+ + M V G+ALIDMY+KCGS+K A +F R K+V++WN
Sbjct: 258 SGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWN 317
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
+++G HG V SI++FE+ML+ +R +E+T ++VL ACSHGG+V+KG E F M+ +
Sbjct: 318 SIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHK 377
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVT 474
Y V+ + +HY C+VDML R+G + EA++ + + + + + C +HG +LA
Sbjct: 378 YRVEPNIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKH 437
Query: 475 MGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+ + + +V+LSNI A+ GEW +E +RK+M + V K+ R+ R
Sbjct: 438 ANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNKEADSERLHHR 493
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 133/258 (51%), Gaps = 10/258 (3%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYR 110
++ YA GD+ AR +FD++P +V ++W VM S + G+ A+ F M+ +
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDV--VSWNVMISGYVRCGSHLHALELFEQMQRMGEK 242
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN--DVSVGNALIDMYSKCGLLCSAR 168
+ T +L AC D+ G+++H+ + M N V +GNALIDMY+KCG + SA
Sbjct: 243 PDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAH 302
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
VF M ++DV +W S++ G V E++ +FE+M + P++ T+ A++ + + G
Sbjct: 303 EVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGG 362
Query: 229 DSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
+ FF+ M + V P++ + ++ ++ EA + M +PN+V
Sbjct: 363 MVDKGREFFNLMQHKYRVEPNIKHYGCIVDMLGRAGLLKEAFEFIDTM---KCEPNSVIW 419
Query: 288 TGVLQAGGLTGSIQIGRE 305
+L A + G I++ +
Sbjct: 420 RTLLSACRVHGEIELAKH 437
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-------LKSKLVGVYAGCGDVNSARLVFD 71
LL C S L G+++H+ L ++FS L + L+ +YA CG + SA VF
Sbjct: 251 LLSACADSGDLDVGQRLHSSLS----DMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFW 306
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+ + +V N +V A G+ E+I F M + R ++ TF VL AC + K
Sbjct: 307 SMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDK 366
Query: 132 GKQ-VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGY 189
G++ + + + E ++ ++DM + GLL A M E + V W +++S
Sbjct: 367 GREFFNLMQHKYRVEPNIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSA- 425
Query: 190 CNV 192
C V
Sbjct: 426 CRV 428
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 291/544 (53%), Gaps = 37/544 (6%)
Query: 30 RQGKQVHAL-LCTNDLNIFSLKSKLVGVYAG--CGDVNSARLVFDKIPNPNVFMLNWMVM 86
R+ Q+HAL + T LN S+ S+L+ +YA ++ A +FD I P + N ++
Sbjct: 29 REANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIK 88
Query: 87 ASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
+AI F L+ +F+ + FT VLK C L +++GKQ+H + ++GF
Sbjct: 89 CYIENQRSNDAIALFCKLLCDFVP--DSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFG 146
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
D V ++L+ MYSKCG + R+VF M ++DVVSW S+I GY +++ A+ +FE M
Sbjct: 147 VDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEM 206
Query: 206 K----------LEGLEP-----------------NQFTYNAIIASYARRGDSNAAFAFFS 238
++GL N ++NA+I Y + GDSN A F
Sbjct: 207 PEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFD 266
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
+M LVTWN+MI+G+ ++K+ +ALKLF+ ML I PN T+ G + A
Sbjct: 267 QMPERS----LVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMV 322
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
S+ GR +H+ + + G D G+ LI+MYSKCGS+K A +F K + W ++I
Sbjct: 323 SLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIV 382
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
G HG+V+ ++ELF+ M G++ + +T I VL+ACSH G E F+ M YG+K
Sbjct: 383 GLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIK 442
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEE 478
S EHY C++D+LCR+G + EA D + ++P+ + + +G HG + +
Sbjct: 443 PSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQH 502
Query: 479 FFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEV 538
++ +V+LSN+ AA G W + +R++MK+K ++K PG S +E + E V
Sbjct: 503 LIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIV 562
Query: 539 QNES 542
++S
Sbjct: 563 GDKS 566
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 176/390 (45%), Gaps = 52/390 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI--FSLKSKLVGVYAGCGDVNSARLVFDKI 73
L C+L C + AL++GKQ+H L+ + F L S LV +Y+ CG++ R VFD++
Sbjct: 117 LPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVL-SSLVSMYSKCGEIELCRKVFDRM 175
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+ +V N ++ A G + A+ F M E + F+++I++ GL K +
Sbjct: 176 EDKDVVSWNSLIDGYARCGEIELALEMFEEMPEK----DSFSWTILID---GLSKSGKLE 228
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
V +M N VS NA+I+ Y K G +A+ +F M ER +V+W SMI+GY
Sbjct: 229 AARDVFDRMPIRNSVS-WNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNK 287
Query: 194 KVDEAVVLFERMKLEGLEPN--------------------QFTYNAIIAS---------- 223
+ +A+ LFE M E + PN ++ ++ I+ S
Sbjct: 288 QFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGT 347
Query: 224 -----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
Y++ G +A F + + L W ++I G + L+LF M +
Sbjct: 348 LLIEMYSKCGSVKSALRVFRSIPKK----KLGHWTSVIVGLGMHGLVEQTLELFDEMCRT 403
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G+KP+ +T GVL A G + R + G+ + LID+ + G L++
Sbjct: 404 GLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEE 463
Query: 338 ARTLFEITRIK-NVASWNAMIGCYGKHGMV 366
A+ E IK N W +++ KHG +
Sbjct: 464 AKDTIERMPIKANKVIWTSLLSGSRKHGNI 493
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 187/511 (36%), Positives = 275/511 (53%), Gaps = 53/511 (10%)
Query: 31 QGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDV---NSARLVFDKIPNPNVFMLNWMVM 86
Q KQVHA + N L+ S + +KL+ + DV + LVF ++ PN F+ M+
Sbjct: 57 QIKQVHAHIIRNGLSQCSYVLTKLIRMLTKV-DVPMGSYPLLVFGQVNYPNPFLWTAMIR 115
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG-FE 145
A G E+ +++ MR FTFS + KAC L++ GKQVHA +G F
Sbjct: 116 GYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFA 175
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+D+ VGN++ID+Y KCG L AR+VF M ERDVVSWT +I Y ++ A LF+ +
Sbjct: 176 SDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDL 235
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
L+ + + A++ YA+ G A +F +M G D VT +IS AQ
Sbjct: 236 PLK----DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQ---- 287
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI--DVFTGS 323
G+++ I + R G +V GS
Sbjct: 288 -------------------------------LGAVKHANWIRDIAERSGFGPSGNVVVGS 316
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
ALIDMYSKCGS +A +FE+ + +NV S+++MI Y HG S+++LF ML+ +R
Sbjct: 317 ALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRP 376
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
N+VT I +LSACSH GLVE+G ++F M++ +GV S +HYAC+VD+L R+G + EA DL
Sbjct: 377 NKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDL 436
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG---FVMLSNICAAD 500
++ +PM + GA C IHG D+A E F++ +P+G +++LSNI A+
Sbjct: 437 VKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKL---EPNGIGNYILLSNIYASA 493
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
G W E LRK+++EK +K PG S E +N
Sbjct: 494 GRWEEVSKLRKVIREKGFKKNPGCSWFEGKN 524
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/557 (31%), Positives = 280/557 (50%), Gaps = 54/557 (9%)
Query: 10 NLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
N VNY + L G +K T +N + S L+ +Y G + R V
Sbjct: 129 NSDVNYGELLHGYAVK---------------TGLVNSVFVGSALLDMYTKNGKIFEGRRV 173
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
F ++P NV ++ G +EA+ YFS M + +TF+I LKAC +
Sbjct: 174 FHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGAL 233
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
G+++HA A + GF+ V N L MY+KCG L +F M RDVVSWT++I+
Sbjct: 234 NYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTL 293
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------------- 217
+ + + AV F RM+ + PN++T+
Sbjct: 294 VQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASL 353
Query: 218 ---NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
N+I+ YA+ G ++ F MT D+V+W+ +I+G+ Q +EA +L
Sbjct: 354 SVENSIMTMYAKCGQLTSSSVIFHEMTRR----DIVSWSTIIAGYXQGGHVSEAFELLSW 409
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M + G KP + VL A G ++ G+++HA V +GL SALI+MY KCGS
Sbjct: 410 MRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGS 469
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
+++A +F+ ++ SW AMI Y +HG I+LFE++ G+R + VT I VLSA
Sbjct: 470 IEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSA 529
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS 454
CSH GLV+ G F +M ++Y + SKEHY C++D+LCR+GR+ +A ++ +P + +
Sbjct: 530 CSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDV 589
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMK 514
+ C +HG + E ++ + L+NI A+ G+W EA ++RK+MK
Sbjct: 590 VWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMK 649
Query: 515 EKNVQKQPGFSRVEKRN 531
K V K+PG+S ++ ++
Sbjct: 650 SKGVIKEPGWSWIKVKD 666
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 228/485 (47%), Gaps = 57/485 (11%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAF--TGNFQEAIGYFSLMR-EFIYRCNKFTFS 117
G + +AR +FDK+ + ++W + S + + EA+ F MR E R + F S
Sbjct: 63 GHLGNARRMFDKMSQKD--EISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
+ KAC D+ G+ +H A + G N V VG+AL+DMY+K G + RRVFH M R
Sbjct: 121 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 180
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
+VVSWT++I+G EA+V F M +E + +T+ + + A G N
Sbjct: 181 NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIH 240
Query: 238 SRMTAEGF-------------------------------VPDLVTWNAMISGFAQSKREN 266
++ +GF + D+V+W +I+ Q +E
Sbjct: 241 AQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 300
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
A++ F M S + PN T V+ I+ G ++HAL+ +GL + ++++
Sbjct: 301 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIM 360
Query: 327 DMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
MY+KCG L + +F E+TR +++ SW+ +I Y + G V + EL M EG + E
Sbjct: 361 TMYAKCGQLTSSSVIFHEMTR-RDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTE 419
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV----VDMLCRSGRMVEA- 440
L SVLSAC + ++E G ++ Y + I EH A V ++M C+ G + EA
Sbjct: 420 FALASVLSACGNMAILEHGKQL-----HAYVLSIGLEHTAMVLSALINMYCKCGSIEEAS 474
Query: 441 --YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNI 496
+D + +M NG HG + + E+ +GLR PD F+ + +
Sbjct: 475 RIFDAAENDDIVSWTAMI----NGYAEHGYSREVIDLFEKIPRVGLR-PDSVTFIGVLSA 529
Query: 497 CAADG 501
C+ G
Sbjct: 530 CSHAG 534
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 172/354 (48%), Gaps = 37/354 (10%)
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+ D+ N + K G L +ARR+F M ++D +SWT++ISGY N + EA++LF+
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105
Query: 205 MKLE-GLEPNQF---------------TYNAIIASYA-RRGDSNAAF---AFFSRMTAEG 244
M++E GL + F Y ++ YA + G N+ F A T G
Sbjct: 106 MRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165
Query: 245 FV----------P--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
+ P ++V+W A+I+G ++ EAL F M S ++ ++ T L+
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALK 225
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A +G++ GREIHA + G + F + L MY+KCG L+ TLFE +++V S
Sbjct: 226 ACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVS 285
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
W +I + G + +++ F RM E + NE T +V+S C++ +E G E ++
Sbjct: 286 WTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWG-EQLHALI 344
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEA----YDLLRQVPMYVTNSMAGAFRNG 462
G+ S ++ M + G++ + +++ R+ + + +AG + G
Sbjct: 345 LHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGG 398
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 269/476 (56%), Gaps = 14/476 (2%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM----REFIYRCNKFTF 116
G + A LVFD+IP P+ FM N ++ +A T ++A+ ++ M R +K TF
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 117 SIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE 176
VL+AC + G QVHA + G E+D V NALI M++ CG L A +F G
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAF 236
D V+W++MI+G + A LF+ ++ L ++N +I +YA+RGD A
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDL----VSWNVMITAYAKRGDMALAREL 201
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F ++ D+V+WN MISG+ + AL+LF+ M G KP+ VT+ +L A
Sbjct: 202 FDQVPER----DVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACAD 257
Query: 297 TGSIQIGREIHALVCRMGLH--IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
+G + +G+ +H+ + M V G+ALIDMY+KCGS+K A +F R K+V++WN
Sbjct: 258 SGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWN 317
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
+++G HG V SI++FE+ML+ +R +E+T ++VL ACSHGG+V+KG E F M+ +
Sbjct: 318 SIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHK 377
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVT 474
Y V+ + +HY C+VDML R+G + EA++ + + + + + C +HG +LA
Sbjct: 378 YRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKH 437
Query: 475 MGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+ + + +V+LSNI A+ GEW +E +RK+M + V K+ R+ R
Sbjct: 438 ANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNKEADSERLHHR 493
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 133/258 (51%), Gaps = 10/258 (3%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYR 110
++ YA GD+ AR +FD++P +V ++W VM S + G+ A+ F M+ +
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDV--VSWNVMISGYVRCGSHLHALELFEQMQRMGEK 242
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN--DVSVGNALIDMYSKCGLLCSAR 168
+ T +L AC D+ G+++H+ + M N V +GNALIDMY+KCG + SA
Sbjct: 243 PDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAH 302
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
VF M ++DV +W S++ G V E++ +FE+M + P++ T+ A++ + + G
Sbjct: 303 EVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGG 362
Query: 229 DSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
+ FF+ M + V P++ + M+ ++ EA + M +PN+V
Sbjct: 363 MVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTM---KCEPNSVIW 419
Query: 288 TGVLQAGGLTGSIQIGRE 305
+L A + G I++ +
Sbjct: 420 RTLLSACRVHGEIELAKH 437
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-------LKSKLVGVYAGCGDVNSARLVFD 71
LL C S L G+++H+ L ++FS L + L+ +YA CG + SA VF
Sbjct: 251 LLSACADSGDLDVGQRLHSSLS----DMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFW 306
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+ + +V N +V A G+ E+I F M + R ++ TF VL AC + K
Sbjct: 307 SMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDK 366
Query: 132 GKQ-VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGY 189
G++ + + + E ++ ++DM + GLL A M E + V W +++S
Sbjct: 367 GREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSA- 425
Query: 190 CNV 192
C V
Sbjct: 426 CRV 428
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 281/520 (54%), Gaps = 16/520 (3%)
Query: 19 LLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
++ C L G +H AL+ N+F +++ L+ +Y CG V AR VF+ +
Sbjct: 190 VIKACSVMSMLNVGVLIHGRALVSGFSSNMF-VQNSLLAMYMNCGKVGLARQVFNVMLKR 248
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V N M+ G +EA+ F+ M + + T L +C L +++ G +VH
Sbjct: 249 SVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVH 308
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ + + + V NAL+DMYS+CG + A VF E+DV++WTSMI+GY
Sbjct: 309 KLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGNAK 368
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIAS-------YARRGDSNAAFAFFSRMTAEGFVPDL 249
A+ L M+L+G+ PN T +++++ YA+ + +F F++ + + VP
Sbjct: 369 SALALCPAMQLDGVVPNAVTLASLLSACASLCYMYAKCNAVSYSFQVFAKTSKKRTVP-- 426
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
WNA++SG ++ EA+ LFK ML+ ++ N+ T V+ A + ++ +H+
Sbjct: 427 --WNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSY 484
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE--ITRIKNVASWNAMIGCYGKHGMVD 367
+ R G + + LIDMYSKCGSL A +F+ + K++ W+ +I YG HG +
Sbjct: 485 LVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGE 544
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+++ LF +M+ GM+ NE+T SVL ACSH GLV+ GL +F+ M E Y HY CV
Sbjct: 545 TAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCV 604
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
VD+L R+GR+ EAYDL++ +P +S+ GA C IH +L E FE+
Sbjct: 605 VDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPEST 664
Query: 488 DGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
+++L+NI AA G W +AEN+R IM + ++K P S V
Sbjct: 665 GNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQSSV 704
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 141/553 (25%), Positives = 243/553 (43%), Gaps = 76/553 (13%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL----NIFSLKSKLVGVYAGCGDVNSAR 67
+V+ D LL +++L + K +H T+ L N L S L YA CG V AR
Sbjct: 78 NVHRCDSLLRHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLAR 137
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGL 126
+FD + +P++F+ N ++ G +A+ F S++ + +K+TF +V+KAC +
Sbjct: 138 KLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVM 197
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
+ G +H A GF +++ V N+L+ MY CG + AR+VF+ M +R VVSW +MI
Sbjct: 198 SMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMI 257
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------------- 217
SG+ + +EA+ +F M +EP+ T
Sbjct: 258 SGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQ 317
Query: 218 ------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
NA++ Y+R G + A F AE D++TW +MI+G+ + AL L
Sbjct: 318 EKIEVRNALVDMYSRCGGIDEASLVF----AETKEKDVITWTSMINGYIMNGNAKSALAL 373
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
M + G+ PN VT+ +L A C ++L MY+K
Sbjct: 374 CPAMQLDGVVPNAVTLASLLSA-----------------C-----------ASLCYMYAK 405
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
C ++ + +F T K WNA++ + + ++ LF+ ML E + AN T SV
Sbjct: 406 CNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSV 465
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
+ A + +++ + + S R G ++DM + G + A+ + ++P
Sbjct: 466 IPAYAILADLKQVMNL-HSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKE 524
Query: 452 TNSMA-GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENL 509
+ + G +HG + AV + + G++ + F + + C+ G + L
Sbjct: 525 KDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTL 584
Query: 510 RKIMKEKNVQKQP 522
K M E N P
Sbjct: 585 FKYMIE-NYPSSP 596
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/512 (33%), Positives = 282/512 (55%), Gaps = 1/512 (0%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C S+A+ +G+Q H L L + + L S ++ Y G + A +VF + +V
Sbjct: 266 CANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTW 325
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
N +V A G ++A+ +MRE R + T S +L D+ G + HA +
Sbjct: 326 NLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVK 385
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
FE DV V + +IDMY+KCG + ARRVF + ++D+V W +M++ EA+ L
Sbjct: 386 NDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKL 445
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
F +M+LE + PN ++N++I + + G A F+ M + G +P+L+TW M+SG Q
Sbjct: 446 FFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSGVMPNLITWTTMMSGLVQ 505
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
+ + A+ +F+ M GI+PN++++T L ++ GR IH V R L +
Sbjct: 506 NGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHI 565
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
++++DMY+KCGSL A+ +F++ K + +NAMI Y HG ++ LF++M +EG+
Sbjct: 566 ITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAREALVLFKQMEKEGI 625
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
+ +TL SVLSACSHGGL+++G+++F+ M +K S+EHY C+V +L G++ EA
Sbjct: 626 VPDHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDEAL 685
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
+ +P + + G+ C + +LA + + ++ +V LSN+ AA G
Sbjct: 686 RTILTMPSHPDAHILGSLLTACGQNNDIELADYIAKWLLKLDPDNSGNYVALSNVYAAVG 745
Query: 502 EWHEAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
+W + NLR +MKEK ++K PG S +E E
Sbjct: 746 KWDKVSNLRGLMKEKGLRKIPGCSWIEVGQEL 777
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 151/510 (29%), Positives = 241/510 (47%), Gaps = 56/510 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLC----TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
LL C+ +AL Q+HA + T LN F + SKLV +YA CG A +F P
Sbjct: 57 LLQGCVYERALPLALQLHADVIKRGPTFALNDFVI-SKLVILYAKCGASEPATRLFRDSP 115
Query: 75 NPNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+PNVF ++ TG +EA+ GY + ++ + N F VLKAC L ++ GK
Sbjct: 116 SPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDN-FVLPNVLKACGVLKWVRFGK 174
Query: 134 QVHA-VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
VHA V +G + V V +L+DMY KCG + A +VF M ER+ V+W SM+ Y
Sbjct: 175 GVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQN 234
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR------------------------G 228
EA+ +F M+L+G+E + + A G
Sbjct: 235 GMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLG 294
Query: 229 DSNAAFAFFSRMTAEG-------FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
S F F + E V D+VTWN +++G+AQ +AL++ M G++
Sbjct: 295 SSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLR 354
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+ VT++ +L T + +G + HA + DV S +IDMY+KCG + AR +
Sbjct: 355 FDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRV 414
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F R K++ WN M+ + G+ +++LF +M E + N V+ S++ G V
Sbjct: 415 FSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQV 474
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCR----SGRMV---EAYDL-LRQVPMYVTN 453
+ +F M GV + + ++ L + SG M+ E D+ +R M +T+
Sbjct: 475 AEARNMFAEMCSS-GVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITS 533
Query: 454 SMAGA-----FRNGCNIHG---RRDLAVTM 475
+++G ++G IHG RRDL+ ++
Sbjct: 534 ALSGCTSMALLKHGRAIHGYVMRRDLSQSI 563
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 209/463 (45%), Gaps = 57/463 (12%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG--FENDVS 149
G +EA+ + M + +L+ CV + Q+HA + G F +
Sbjct: 30 GRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPTFALNDF 89
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
V + L+ +Y+KCG A R+F +V SW ++I + +EA+ + +M+ +G
Sbjct: 90 VISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDG 149
Query: 210 LEPNQFTYNAIIAS-----YARRGDSNAAFAFFSRMTAE---------------GFVPDL 249
L P+ F ++ + + R G AF + E G V D
Sbjct: 150 LPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDA 209
Query: 250 ------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
VTWN+M+ +AQ+ EA+++F+ M + G++ V ++G A +
Sbjct: 210 GKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANS 269
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
++ GR+ H L GL +D GS++++ Y K G +++A +F +K+V +WN ++
Sbjct: 270 EAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVV 329
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
Y + GMV+ ++E+ M EEG+R + VTL ++L+ + + G++ Y V
Sbjct: 330 AGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMK-----AHAYCV 384
Query: 418 KISKEHYACV----VDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
K E V +DM + GRM A + +R+ + + N+M A C G
Sbjct: 385 KNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAA----CAEQGLSG 440
Query: 471 LAVTMGEEFFEMGLRK-PDGFVMLSNICAA---DGEWHEAENL 509
A+ + FF+M L P V +++ +G+ EA N+
Sbjct: 441 EALKL---FFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNM 480
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/490 (33%), Positives = 272/490 (55%), Gaps = 22/490 (4%)
Query: 42 NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF 101
N+ N+ + +KL+ Y CGD++SA VF+ + + N ++ A F + G+F
Sbjct: 37 NNNNVIA-SNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAA------FAKKPGHF 89
Query: 102 SLMREF---IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMY 158
R+ I + N +++I+L L + + M + DV+ N +I
Sbjct: 90 EYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDAR---GFFDSMPLK-DVASWNTMISAL 145
Query: 159 SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYN 218
++ GL+ ARR+F M E++ VSW++M+SGY +D AV F + + T+
Sbjct: 146 AQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSV----ITWT 201
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+I Y + G A F M+ LVTWNAMI+G+ ++ R + L+LF+ ML +
Sbjct: 202 AMITGYMKFGRVELAERLFQEMSMR----TLVTWNAMIAGYVENGRAEDGLRLFRTMLET 257
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G+KPN +++T VL ++Q+G+++H LVC+ L D G++L+ MYSKCG LKDA
Sbjct: 258 GVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDA 317
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
LF K+V WNAMI Y +HG ++ LF+ M +EG++ + +T ++VL AC+H
Sbjct: 318 WELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHA 377
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLV+ G++ F +M+ +G++ EHYAC+VD+L R+G++ EA DL++ +P ++ G
Sbjct: 378 GLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGT 437
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C IH +LA + E+ G+V L+N+ AA W ++R+ MK+ NV
Sbjct: 438 LLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNV 497
Query: 519 QKQPGFSRVE 528
K PG+S +E
Sbjct: 498 VKIPGYSWIE 507
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 53/362 (14%)
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL--------------------- 210
H +V++ +I+ Y +D AV +FE MK++
Sbjct: 34 HEFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYAR 93
Query: 211 -------EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
+PN +YN ++A + + A FF M + D+ +WN MIS AQ
Sbjct: 94 QLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMP----LKDVASWNTMISALAQVG 149
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
EA +LF M + V+G + G L +++ +A R V T +
Sbjct: 150 LMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVEC---FYAAPMR-----SVITWT 201
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
A+I Y K G ++ A LF+ ++ + +WNAMI Y ++G + + LF MLE G++
Sbjct: 202 AMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKP 261
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRMVEAY 441
N ++L SVL CS+ ++ G ++ + + + +S + A +V M + G + +A+
Sbjct: 262 NALSLTSVLLGCSNLSALQLGKQVHQLVCK---CPLSSDTTAGTSLVSMYSKCGDLKDAW 318
Query: 442 DLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+L Q+P + N+M + HG A+ + +E + GL KPD ++ + A
Sbjct: 319 ELFIQIPRKDVVCWNAMISGYAQ----HGAGKKALRLFDEMKKEGL-KPDWITFVAVLLA 373
Query: 499 AD 500
+
Sbjct: 374 CN 375
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 121/282 (42%), Gaps = 21/282 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPN 77
LLG C AL+ GKQVH L+C L+ + + LV +Y+ CGD+ A +F +IP +
Sbjct: 270 LLG-CSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKD 328
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQ- 134
V N M+ A G ++A+ F M++ + + TF VL AC GL+D+ G Q
Sbjct: 329 VVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDL--GVQY 386
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+ + G E ++D+ + G L A + M + + + G C + K
Sbjct: 387 FNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHK 446
Query: 195 VDEAVVLFERMKLEGLEPNQFT-YNAIIASYARRGDSNAAFAFFSRMTAEGFVP----DL 249
+ + F L L+P T Y + YA + + + M V
Sbjct: 447 -NLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSW 505
Query: 250 VTWNAMISGFAQSKRENEAL--------KLFKGMLVSGIKPN 283
+ N+++ GF S R + L L K M ++G P+
Sbjct: 506 IEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPD 547
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/567 (32%), Positives = 291/567 (51%), Gaps = 75/567 (13%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALL-----------CTNDL--------------- 44
L L LL C S+ALR+GK+VH L +N L
Sbjct: 57 LDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARK 116
Query: 45 --------NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQE 96
N++S + L G YA G + AR +FDK+P +V N MV+A A G + E
Sbjct: 117 VFDKMSARNLYSWNNMLSG-YAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDE 175
Query: 97 AIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALID 156
A+ ++S R+ +CN F+F+ VL CV L ++ +QVH GF ++V + ++++D
Sbjct: 176 ALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLD 235
Query: 157 MYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT 216
Y KCGL+ AR++F M RDV++WT+M+SGY
Sbjct: 236 AYVKCGLMGDARKLFDEMSARDVLAWTTMVSGY--------------------------- 268
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
A+ GD +A F M + + V+W A+ISG+A++ ++AL+LF M+
Sbjct: 269 --------AKWGDMKSANELFVEMPEK----NPVSWTALISGYARNGMGHKALELFTKMM 316
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+ ++P+ T + L A S++ G++IHA + R+ + SALIDMYSKCGSL
Sbjct: 317 LFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLG 376
Query: 337 DARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
R +F++ K +V WN +I +HG + +I++ + M+ G + +++T + +L+AC
Sbjct: 377 IGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNAC 436
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH GLV++GL F SM YG+ S+EHYAC++D+L R+G E D L ++P + +
Sbjct: 437 SHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRV 496
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
A C IHG +L E E+ + +V+LS+I A G W + +R++M E
Sbjct: 497 WNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNE 556
Query: 516 KNVQKQPGFSRVEKRNEFVEKEVQNES 542
+ V+K+ S +E N+ V + S
Sbjct: 557 RQVKKERAISWLEIENKVHSFSVSDSS 583
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 195/400 (48%), Gaps = 23/400 (5%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS-VGNALIDMYSKCGLLCSAR 168
R + T + +L+ C +++GK+VH G + + + N LI+MY+KCG AR
Sbjct: 56 RLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEAR 115
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
+VF M R++ SW +M+SGY + + A LF++M E + ++N ++ ++A+ G
Sbjct: 116 KVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMP----EKDVVSWNTMVIAHAQCG 171
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
+ A F+S G + ++ +++ + K ++ +LV+G N V +
Sbjct: 172 YWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSS 231
Query: 289 GVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
VL A G + R++ + R DV + ++ Y+K G +K A LF
Sbjct: 232 SVLDAYVKCGLMGDARKLFDEMSAR-----DVLAWTTMVSGYAKWGDMKSANELFVEMPE 286
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
KN SW A+I Y ++GM ++ELF +M+ +R ++ T S L AC+ ++ G +I
Sbjct: 287 KNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQI 346
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRM---VEAYDLL-RQVPMYVTNSMAGAFRNGC 463
+ R + + + ++DM + G + + +DL+ ++ + + N++ A
Sbjct: 347 HAYLL-RINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQ-- 403
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADG 501
HG + A+ M ++ G KPD FV++ N C+ G
Sbjct: 404 --HGCGEEAIQMLDDMVRSG-AKPDKITFVVILNACSHSG 440
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
I + + NEA+ + + G++ ++ T+ +LQ + +++ G+ +H + GL
Sbjct: 31 IVKLCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGL 90
Query: 316 -HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
F + LI+MY+KCG +AR +F+ +N+ SWN M+ Y K GM+ + +LF+
Sbjct: 91 KRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFD 150
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
+M E+ + V+ +++ A + G ++ L + ++
Sbjct: 151 KMPEKDV----VSWNTMVIAHAQCGYWDEALRFYSEFRQ 185
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/516 (31%), Positives = 283/516 (54%), Gaps = 4/516 (0%)
Query: 19 LLGKCM-KSKALRQGKQVHALL-CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL K + ++ ++ K++H ++ N SL KL+ YA CG+ R VFD++ +
Sbjct: 23 LLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDR 82
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV N M+ + + + + F M +R + +T+ VLKAC +++ G +H
Sbjct: 83 NVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIH 142
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++G + ++ VGN LI MY KCG L ARRVF M +DVVSW SM++GY + + D
Sbjct: 143 GDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFD 202
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
+A+ + M+ G +P+ T +++ + A N + ++ +L++WN MI
Sbjct: 203 DALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYV--EKIFVNLERKNLISWNVMI 260
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+ ++ +A+ L+ M ++P+ +T VL A G ++ +GR IH V + L
Sbjct: 261 RVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLC 320
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
++ ++LIDMY++CG L DA+ +F+ + ++VASW ++I YG G +++ LF M
Sbjct: 321 PNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEM 380
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
L G + + +++LSACSH GL+++G F+ M + Y + EHYAC+VD+L R+GR
Sbjct: 381 LNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGR 440
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
+ EAY++++Q+P+ + + C + D+ + + ++ + +V+LSNI
Sbjct: 441 VDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNI 500
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
A G W E +R +MK K ++K PG S VE N+
Sbjct: 501 YAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQ 536
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 160/351 (45%), Gaps = 19/351 (5%)
Query: 18 CLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C+L C S+ LR G +H L D N+F + + L+ +Y CG + AR VFD++
Sbjct: 124 CVLKACSCSENLRYGLLIHGDVLKVGLDFNLF-VGNGLIAMYGKCGCLFEARRVFDEMIW 182
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V N MV A F +A+ M ++ + + T + ++ A V + V
Sbjct: 183 KDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPA-VANTSSENVLYV 241
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM----FERDVVSWTSMISGYCN 191
+ + +N +S N +I +Y K L A ++ M E D +++ S++ +
Sbjct: 242 EKIFVNLERKNLIS-WNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGD 300
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
+S + + E ++ + L PN N++I YAR G + A F RM D+ +
Sbjct: 301 LSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFR----DVAS 356
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
W ++IS + + + A+ LF ML SG P+++ +L A +G + GR +
Sbjct: 357 WTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMT 416
Query: 312 ---RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK-NVASWNAMIG 358
R+ I+ + + L+D+ + G + +A + + I+ N W ++
Sbjct: 417 DDYRITPRIEHY--ACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLS 465
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 292/549 (53%), Gaps = 35/549 (6%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + + +G+++H ++ + F L + LV +YA C +V +R VFD+I + N
Sbjct: 144 VLKACSELRETDEGRKLHCQIVKVGSPDSFVL-TGLVDMYAKCREVEDSRRVFDEILDRN 202
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V M++ +E + F+ MRE + N++T ++ AC L + +GK VH
Sbjct: 203 VVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHG 262
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ GF+ + + L+D+Y KCG + A VF + D+VSWT+MI GY E
Sbjct: 263 YVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPRE 322
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGD---------------------SNAAFAF 236
A+ LF + + L PN T ++++++ A+ G NA
Sbjct: 323 ALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATFENALVDM 382
Query: 237 FSRMTAEG---------FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
+++ G F D++ WN++ISG+ Q+ EAL+LF M + P+ +T+
Sbjct: 383 YAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITL 442
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMG-LHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
VL A G+ ++G +H + G L V+ G+AL++ Y+KCG + AR +F+
Sbjct: 443 VSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMG 502
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
KN +W+AMIG YG G S+ELF ML+E + NEV ++LSACSH G++ +G
Sbjct: 503 EKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWR 562
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F +M + Y S +HYAC+VD+L R+GR+ EA D + ++P+ S+ GAF +GC +H
Sbjct: 563 YFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLH 622
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
R DL E+ K +V++SN+ A++G W +A + ++MK++ + K PG+S
Sbjct: 623 SRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSL 682
Query: 527 V--EKRNEF 533
V E N+F
Sbjct: 683 VDIETSNDF 691
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 234/441 (53%), Gaps = 46/441 (10%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAG 59
++R I I ++S N LLG C +LR+ +HALL + L+ L ++KLV +Y
Sbjct: 27 IDRTIASIQSISSNPCFSLLGICKTVSSLRK---IHALLVVHGLSEDLLCETKLVSLYGS 83
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSL-MREFIYRCNKFTFSI 118
G V ARL+FD+I NP+++ M+ ++ E + +++ +R+ + + FSI
Sbjct: 84 FGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSI 143
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
VLKAC L + +G+++H ++G D V L+DMY+KC + +RRVF + +R+
Sbjct: 144 VLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRN 202
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS--------------- 223
VV WTSMI GY + E +VLF RM+ +E NQ+T +++ +
Sbjct: 203 VVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHG 262
Query: 224 --------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
Y + GD AF+ F ++ DLV+W AMI G+AQ
Sbjct: 263 YVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELST----IDLVSWTAMIVGYAQRG 318
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
EALKLF + PN VT + VL A TGS+ +GR +H L ++G F +
Sbjct: 319 YPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATFE-N 377
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
AL+DMY+KC + DAR +FE K+V +WN++I Y ++G ++ELF++M + +
Sbjct: 378 ALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYP 437
Query: 384 NEVTLISVLSACSHGGLVEKG 404
+ +TL+SVLSAC+ G G
Sbjct: 438 DAITLVSVLSACASVGAYRVG 458
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 277/504 (54%), Gaps = 13/504 (2%)
Query: 28 ALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGC--GDVNSARLVFDKIPNPNVFMLNWM 84
+L+ Q+HAL L + + L+ YA + + A VF IPNPNVF+ N +
Sbjct: 45 SLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIV 104
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ +AI ++ M R NKFT+ + KAC +++G+Q+H + G
Sbjct: 105 IKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGI 163
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+DV + +A I MY+ G L AR++F+ E DVV W +MI GY ++ A LF +
Sbjct: 164 GSDVHIKSAGIQMYASFGRLEDARKMFYSG-ESDVVCWNTMIDGYLKCGVLEAAKGLFAQ 222
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M ++ N ++N +I A+ G+ A F M+ D ++W++M+ G+ + R
Sbjct: 223 MPVK----NIGSWNVMINGLAKGGNLGDARKLFDEMSER----DEISWSSMVDGYISAGR 274
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
EAL++F+ M +P ++ VL A G+I GR +HA + R + +D G+A
Sbjct: 275 YKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTA 334
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+DMY+KCG L +FE + + + +WNAMIG HG + ++ELF ++ E M+ N
Sbjct: 335 LLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPN 394
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
+TL+ VL+AC+H G V+KGL IF++M+E YGV EHY C+VD+L RSG EA DL+
Sbjct: 395 GITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLI 454
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+PM ++ GA C IHG DLA +G+ E+ + +V+LSNI A G +
Sbjct: 455 NSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFD 514
Query: 505 EAENLRKIMKEKNVQKQPGFSRVE 528
+ +RK+MK + ++ PG S V+
Sbjct: 515 DVSKIRKLMKNRGIKTVPGVSIVD 538
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 167/402 (41%), Gaps = 77/402 (19%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAG------------------ 59
L C ++A+++G+Q+H + + + + +KS + +YA
Sbjct: 138 LFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDV 197
Query: 60 ------------CGDVNSARLVFDKIPNPNV----FMLN--------------------- 82
CG + +A+ +F ++P N+ M+N
Sbjct: 198 VCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSER 257
Query: 83 ----WMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
W M + G ++EA+ F M+ R +F S VL AC + I +G+ VH
Sbjct: 258 DEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVH 317
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + + D +G AL+DMY+KCG L VF M ER++ +W +MI G + +
Sbjct: 318 AYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAE 377
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA-EGFVPDLVTWNAM 255
+A+ LF +++ ++PN T ++ + A G + F M G P+L + M
Sbjct: 378 DALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCM 437
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM-- 313
+ +S +EA L M +KPN +L A + G+ + + ++ +
Sbjct: 438 VDLLGRSGLFSEAEDLINSM---PMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEP 494
Query: 314 ---GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
G ++ L ++Y+K G D + ++ + + + +
Sbjct: 495 QNSGRYV------LLSNIYAKVGRFDDVSKIRKLMKNRGIKT 530
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C A+ QG+ VHA L N + + + L + L+ +YA CG ++ VF+++
Sbjct: 297 LSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMK 356
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+F N M+ A G ++A+ FS ++E + N T VL AC + KG +
Sbjct: 357 EREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLR 416
Query: 135 VHAVATQM-GFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+ + G + ++ ++D+ + GL A + + M + + W +++ G C +
Sbjct: 417 IFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALL-GACRI 475
Query: 193 SKVDEAVVLFERMKLEGLEP-NQFTYNAIIASYARRG 228
+ ++ LE LEP N Y + YA+ G
Sbjct: 476 HGNFDLAERVGKILLE-LEPQNSGRYVLLSNIYAKVG 511
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC--GSLKDARTLFE 343
TV + + +T S+Q ++HALV R G D + AL+ Y+ + A +F
Sbjct: 33 TVLKLFDSKSIT-SLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFS 91
Query: 344 ITRIKNVASWNAMI-GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
NV WN +I GC + + +I + RM+ + R N+ T ++ ACS V+
Sbjct: 92 SIPNPNVFIWNIVIKGCLENNKLF-KAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQ 149
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+G +I + ++G+ + + M GR+ +A
Sbjct: 150 EGRQIHGHVV-KHGIGSDVHIKSAGIQMYASFGRLEDA 186
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 286/542 (52%), Gaps = 32/542 (5%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C ALR G Q+H D + + + +Y C +++ A+ +F+ +PN N+
Sbjct: 285 CAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSY 344
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
N +++ A + EA+G F L+++ ++ + S +AC + +G QVH ++ +
Sbjct: 345 NAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMK 404
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
++++ V NA++DMY KCG L A VF M RD VSW ++I+ + ++ + L
Sbjct: 405 SLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSL 464
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF-----SRMTAEGFV---------- 246
F M G+EP++FTY +++ + A N SR+ + FV
Sbjct: 465 FVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSK 524
Query: 247 ----------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+V+WNA+ISGF+ K+ EA K F ML G+ P+N T +
Sbjct: 525 CGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATI 584
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L ++++G++IHA + + L D + S L+DMYSKCG+++D + +FE ++
Sbjct: 585 LDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDF 644
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+WNAM+ Y +HG+ + ++++FE M E ++ N T ++VL AC H GLVEKGL F S
Sbjct: 645 VTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHS 704
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M YG+ EHY+CVVD++ RSG++ +A +L+ +P + + C IHG +
Sbjct: 705 MLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVE 764
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+A ++ +V+LSNI A G W+E LRK+M+ ++K+PG S +E +
Sbjct: 765 VAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIK 824
Query: 531 NE 532
+E
Sbjct: 825 SE 826
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 147/533 (27%), Positives = 258/533 (48%), Gaps = 47/533 (8%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGD 62
R+I +V +CL+ +K L +V + D S + L G YAG GD
Sbjct: 67 RMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRD--TVSWNAMLFG-YAGRGD 123
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
+ A+ +FD +P +V N ++ G+ ++ I F M ++ TF++VLK+
Sbjct: 124 IGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKS 183
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C L D G Q+H +A +MGF+ DV G+AL+DMY+KC L + + FH M E++ VSW
Sbjct: 184 CSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSW 243
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFF 237
+++I+G + + LF+ M+ G+ +Q T+ ++ S A R G A
Sbjct: 244 SAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALK 303
Query: 238 SRMTAEGFV--------------------------PDLVTWNAMISGFAQSKRENEALKL 271
+ + + +L ++NA+I G+A+S + EAL +
Sbjct: 304 TDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGM 363
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F+ + SG+ + V+++G +A + G ++H L + ++ +A++DMY K
Sbjct: 364 FRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGK 423
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
CG+L +A +FE ++ SWNA+I + ++G + ++ LF ML+ GM +E T SV
Sbjct: 424 CGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSV 483
Query: 392 LSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQV 447
L AC+ + G+EI R +K R G + ++DM + G M +A +D L +
Sbjct: 484 LKACAGWQALNCGMEIHNRIIKSRLG--LDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQ 541
Query: 448 PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICA 498
+ N++ F ++ + + A + EMG+ PD F + + CA
Sbjct: 542 TVVSWNAIISGF----SLQKQSEEAQKTFSKMLEMGV-DPDNFTYATILDTCA 589
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 214/456 (46%), Gaps = 47/456 (10%)
Query: 32 GKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G Q+H L D ++ + S L+ +YA C ++ + F +P N + ++
Sbjct: 193 GIQIHGLAVKMGFDCDVVT-GSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCV 251
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
+ + + F M++ ++ TF+ V ++C GL ++ G Q+H A + F DV
Sbjct: 252 QNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVV 311
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK--- 206
+G A +DMY KC L A+++F+ + ++ S+ ++I GY K EA+ +F ++
Sbjct: 312 IGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSG 371
Query: 207 ---------------------LEGLE-----------PNQFTYNAIIASYARRGDSNAAF 234
LEGL+ N NAI+ Y + G A
Sbjct: 372 LGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEAC 431
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F M + D V+WNA+I+ Q+ E + L LF ML SG++P+ T VL+A
Sbjct: 432 LVFEEMVSR----DAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKAC 487
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
++ G EIH + + L +D F G ALIDMYSKCG ++ A L + + V SWN
Sbjct: 488 AGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWN 547
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
A+I + + + + F +MLE G+ + T ++L C++ VE G +I + ++
Sbjct: 548 AIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK 607
Query: 415 YGVKISKEHY--ACVVDMLCRSGRMVEAYDLLRQVP 448
++ + Y + +VDM + G M + + + P
Sbjct: 608 ---ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 640
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 148/337 (43%), Gaps = 42/337 (12%)
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
K TFS + + C + GKQ HA F+ V V N LI MY KC L A +VF
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD 101
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
GM +RD VSW +M+ GY + A LF+ M E + ++N++I+ Y GD
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMP----ERDVVSWNSLISGYLHNGDHRK 157
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
F +M G V D T+ ++ + + +
Sbjct: 158 VIDVFLQMGRMGTVFDRTTFAVVLK----------------------------SCSSLED 189
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
GG G +IH L +MG DV TGSAL+DMY+KC L + F KN S
Sbjct: 190 HGG-------GIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVS 242
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSM 411
W+A+I ++ + +ELF+ M + G+ ++ T SV +C+ + G ++ ++
Sbjct: 243 WSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHAL 302
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
K +G + +DM + + +A L +P
Sbjct: 303 KTDFGTDVVIG--TATLDMYMKCNNLSDAQKLFNSLP 337
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 132/259 (50%), Gaps = 2/259 (0%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKS-KLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C +AL G ++H + + L + S L+ +Y+ CG + A + D++
Sbjct: 483 VLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT 542
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V N ++ + +EA FS M E + FT++ +L C L+ ++ GKQ+HA
Sbjct: 543 VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA 602
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ ++D + + L+DMYSKCG + + +F RD V+W +M+ GY +E
Sbjct: 603 QIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEE 662
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMI 256
A+ +FE M+LE ++PN T+ A++ + G +F M + G P L ++ ++
Sbjct: 663 ALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVV 722
Query: 257 SGFAQSKRENEALKLFKGM 275
+S + ++AL+L +GM
Sbjct: 723 DIMGRSGQVSKALELIEGM 741
>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 299/548 (54%), Gaps = 40/548 (7%)
Query: 15 YLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDK 72
+L+ ++ C KS + G Q H+ + N++ + S +V +YA CG+++SAR++FD+
Sbjct: 71 FLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVY-ICSAVVDMYAKCGEISSARVLFDQ 129
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+P V N ++ + AI F M + + F+ S L C L + G
Sbjct: 130 MPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREVG 189
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
QVH + + G +V VG +L+DMYSKCG + +R VF M R+V++WTSM++GY +
Sbjct: 190 TQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYSQI 249
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG-----------------DSNAAFA 235
K DEA+ L + M L+ L PN TYN++++S++ +SN A
Sbjct: 250 EKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVYIA 309
Query: 236 F---------------FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
F ++ + D + WNA+I+G+++ R EAL+ F M +GI
Sbjct: 310 ATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQAGI 369
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL--HIDVFTGSALIDMYSKCGSLKDA 338
++ T+T V+ A G + ++ G+ +HAL+ R G H++V G L+ MY++CG++ D+
Sbjct: 370 DIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYISHLNVQNG--LVSMYARCGAIGDS 427
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+ +F +V SWNA++ + HG ++ELFE+M + ++ N T ++VL ACSH
Sbjct: 428 KRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPNSSTFLAVLCACSHV 487
Query: 399 GLVEKGLEIFRSMKERYGVKISK-EHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
G V+KG+E F +MK ++ K EHYA +VD R+G + EA + +P+ S+
Sbjct: 488 GFVDKGIEYFDTMKSDILLEPLKVEHYASLVDTFGRAGYLNEAEAFINSMPIVPAPSVYK 547
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
A + +HG R++A ++ E+ P +V+LS++ DG W +A +LRK+M ++
Sbjct: 548 ALLSASLVHGNREIAARSAKKLLELWPNDPATYVLLSSVLTVDGNWDDAADLRKLMCDRG 607
Query: 518 VQKQPGFS 525
++K+PG+S
Sbjct: 608 LRKKPGYS 615
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 203/426 (47%), Gaps = 49/426 (11%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
N + + ++ C G Q H+ ++GF ++V + +A++DMY+KCG + SAR +F
Sbjct: 68 NPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISSARVLF 127
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT--------------- 216
M +R VV+W S+I GY V+ A+ LF +M + + F+
Sbjct: 128 DQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEARE 187
Query: 217 ---------------YNAIIAS-----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
YN ++ + Y++ GD + + F M +++TW +M+
Sbjct: 188 VGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNR----NVITWTSMV 243
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+G++Q ++ +EA+ L K M++ ++PN VT +L + + ++H + ++GL
Sbjct: 244 TGYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLE 303
Query: 317 IDVFTGSALIDMYSKC-GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+V+ + L+ +YSKC SL+D + + + + +WNA+I Y K G + ++ F
Sbjct: 304 SNVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHE 363
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M + G+ + TL SV+ A + +E+G + ++ R G +V M R G
Sbjct: 364 MKQAGIDIDSYTLTSVVGAIGNSSFLEEG-KAMHALIHRTGYISHLNVQNGLVSMYARCG 422
Query: 436 RMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
+ ++ + + + + N++ AF + HG AV + E+ + + KP+
Sbjct: 423 AIGDSKRVFWFMEEHDVISWNALLTAFAH----HGYGREAVELFEQMRKTEI-KPNSSTF 477
Query: 493 LSNICA 498
L+ +CA
Sbjct: 478 LAVLCA 483
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 198/436 (45%), Gaps = 63/436 (14%)
Query: 8 INNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSA 66
IN + + CL G C + +A G QVH L+ L + + LV +Y+ CGDV+ +
Sbjct: 166 INVSAFSVSSCLAG-CSQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDS 224
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI---YRCNKFTFSIVLKAC 123
RLVFD + N NV + W M + ++ ++ +L++E + R N T++ +L +
Sbjct: 225 RLVFDHMVNRNV--ITWTSMVTGYS-QIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSF 281
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC-GLLCSARRVFHGMFERDVVSW 182
G + QVH Q+G E++V + L+ +YSKC L ++V + D ++W
Sbjct: 282 SGPDCLSYCLQVHCCIIQLGLESNVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAW 341
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------- 217
++I+GY + + +EA+ F MK G++ + +T
Sbjct: 342 NAVIAGYSKLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHR 401
Query: 218 ----------NAIIASYAR---RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
N +++ YAR GDS F F D+++WNA+++ FA
Sbjct: 402 TGYISHLNVQNGLVSMYARCGAIGDSKRVFWFMEEH-------DVISWNALLTAFAHHGY 454
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE----IHALVCRMGLHIDVF 320
EA++LF+ M + IKPN+ T VL A G + G E + + + L ++ +
Sbjct: 455 GREAVELFEQMRKTEIKPNSSTFLAVLCACSHVGFVDKGIEYFDTMKSDILLEPLKVEHY 514
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLE- 378
++L+D + + G L +A I S + A++ HG + + +++LE
Sbjct: 515 --ASLVDTFGRAGYLNEAEAFINSMPIVPAPSVYKALLSASLVHGNREIAARSAKKLLEL 572
Query: 379 -EGMRANEVTLISVLS 393
A V L SVL+
Sbjct: 573 WPNDPATYVLLSSVLT 588
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 260/460 (56%), Gaps = 10/460 (2%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
VF IPNPNVF+ N ++ +AI ++ M R NKFT+ + KAC
Sbjct: 89 VFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQA 147
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
+++G+Q+H + G +DV + +A I MY+ G L AR++F+ E DVV W +MI G
Sbjct: 148 VQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSG-ESDVVCWNTMIDG 206
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
Y ++ A LF +M ++ N ++N +I A+ G+ A F M+ D
Sbjct: 207 YLKCGVLEAAKGLFAQMPVK----NIGSWNVMINGLAKGGNLGDARKLFDEMSER----D 258
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
++W++M+ G+ + R EAL++F+ M +P ++ VL A G+I GR +HA
Sbjct: 259 EISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHA 318
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
+ R + +D G+AL+DMY+KCG L +FE + + + +WNAMIG HG +
Sbjct: 319 YLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAED 378
Query: 369 SIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
++ELF ++ E M+ N +TL+ VL+AC+H G V+KGL IF++M+E YGV EHY C+V
Sbjct: 379 ALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMV 438
Query: 429 DMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
D+L RSG EA DL+ +PM ++ GA C IHG DLA +G+ E+ +
Sbjct: 439 DLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSG 498
Query: 489 GFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+V+LSNI A G + + +RK+MK++ ++ PG S V+
Sbjct: 499 RYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVD 538
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 145/314 (46%), Gaps = 16/314 (5%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
NI S + G+ G G++ AR +FD++ + + MV G ++EA+ F M
Sbjct: 227 NIGSWNVMINGLAKG-GNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQM 285
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
+ R +F S VL AC + I +G+ VHA + + D +G AL+DMY+KCG L
Sbjct: 286 QREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRL 345
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
VF M ER++ +W +MI G + ++A+ LF +++ ++PN T ++ +
Sbjct: 346 DMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTAC 405
Query: 225 ARRGDSNAAFAFFSRMTA-EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
A G + F M G P+L + M+ +S +EA L M +KPN
Sbjct: 406 AHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM---PMKPN 462
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRM-----GLHIDVFTGSALIDMYSKCGSLKDA 338
+L A + G+ + + ++ + G ++ L ++Y+K G D
Sbjct: 463 AAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYV------LLSNIYAKVGRFDDV 516
Query: 339 RTLFEITRIKNVAS 352
+ ++ + + + +
Sbjct: 517 SKIRKLMKDRGIKT 530
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 18/288 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C A+ QG+ VHA L N + + + L + L+ +YA CG ++ VF+++
Sbjct: 297 LSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMK 356
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+F N M+ A G ++A+ FS ++E + N T VL AC + KG +
Sbjct: 357 EREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLR 416
Query: 135 VHAVATQM-GFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+ + G + ++ ++D+ + GL A + + M + + W +++ G C +
Sbjct: 417 IFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALL-GACRI 475
Query: 193 SKVDEAVVLFERMKLEGLEP-NQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF--VP-- 247
+ ++ LE LEP N Y + YA+ G + M G VP
Sbjct: 476 HGNFDLAERVGKILLE-LEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGV 534
Query: 248 DLVTWNAMISGF-------AQSKRENEALKLFKGML-VSGIKPNNVTV 287
+V N + F Q K LK+ K L ++G P+ V
Sbjct: 535 SIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQV 582
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 7/158 (4%)
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC--GSLKDARTLFE 343
TV + + +T S+Q ++H LV R G D + AL+ Y+ + A +F
Sbjct: 33 TVLKLFDSKSIT-SLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFS 91
Query: 344 ITRIKNVASWNAMI-GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
NV WN +I GC + + +I + RM+ + R N+ T ++ ACS V+
Sbjct: 92 SIPNPNVFIWNIVIKGCLENNKLF-KAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQ 149
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+G +I + ++G+ + + M GR+ +A
Sbjct: 150 EGRQIHGHVV-KHGIGSDVHIKSAGIHMYASFGRLEDA 186
>gi|356518950|ref|XP_003528138.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g64310-like [Glycine max]
Length = 551
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 186/550 (33%), Positives = 282/550 (51%), Gaps = 35/550 (6%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLV 69
+ +L C L KS L + KQ+HA L L+ +K+V +YA D+NSA +
Sbjct: 3 IPFEWLHCELNNICKS--LLRAKQLHAFLLKTHLSQDPFYATKIVRLYAANNDINSAHHL 60
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
FDK PN +V++ N M+ A A + F AI F M + T++ V++AC D
Sbjct: 61 FDKTPNRSVYLWNSMIRAFAQSQRFFNAISLFRTMLGADISPDGHTYACVIRACANNFDF 120
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
++VH A G D +AL+ YSK GL+ ARRVF G+ E D+V W S+ISGY
Sbjct: 121 GMLRRVHGGAVAAGLGRDPVCCSALVAAYSKLGLVHEARRVFDGIAEPDLVLWNSLISGY 180
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG-------------------DS 230
D + +F M+L G++P+ +T ++ A G DS
Sbjct: 181 GGFGLWDVGMQMFSMMRLFGMKPDGYTLAGLLVGIADSGMLSIGQGLHCLSQKSGLDSDS 240
Query: 231 NAAFAFFS------------RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+ S R+ PDLVTW+A+I G++QS + L F+ + +
Sbjct: 241 HVGSLLLSMYSRCKHMASAYRVFCSILNPDLVTWSALIVGYSQSGEYEKVLLFFRKLNME 300
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
KP++V + VL + ++ +G E+H R GL +DV SAL+DMYSKCG L
Sbjct: 301 SKKPDSVLIASVLASIAQMANVGLGCEVHGYALRHGLELDVRVSSALVDMYSKCGFLHLG 360
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+F + +N+ S+N++I +G HG + +F++MLE+G+ +E T S+L AC H
Sbjct: 361 ICVFRVMPERNIVSFNSVILGFGLHGCASEAFRMFDKMLEKGLVPDEATFSSLLCACCHA 420
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLV+ G EIF+ MK + ++ EHY +V +L +G + EAY+L + +P V ++ GA
Sbjct: 421 GLVKDGREIFQRMKHEFNIRARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGA 480
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
+ CNI G +LA T+ + FE VMLSNI A DG W + + LR M
Sbjct: 481 LLSCCNICGNSELAETVAHQLFESSPADNVYRVMLSNIYAGDGRWDDVKKLRDNMT-GGP 539
Query: 519 QKQPGFSRVE 528
+K PG S ++
Sbjct: 540 RKMPGLSWID 549
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 190/612 (31%), Positives = 297/612 (48%), Gaps = 103/612 (16%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C+K ++ R + VH L +F ++++L+ VY CG ++ AR VFD++
Sbjct: 30 LLDLCVKLRSSRDARSVHGRLIQTPFCEEVF-IQNRLIDVYGKCGYLDYARKVFDRMSER 88
Query: 77 NVFMLN-----------------------------WMVMASAFTGN--FQEAIGYFSLMR 105
NVF N W M + F + F+EA+ +F M
Sbjct: 89 NVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMH 148
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
+ N ++F L AC L D+K G Q+H + ++ + DV +G+ LID YSKCGL+
Sbjct: 149 RDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVG 208
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------- 217
ARRVF GM E++VVSW +I+ Y EA+ F RM G +P++ T
Sbjct: 209 CARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACA 268
Query: 218 ----------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVP-- 247
NA++ YA+ G N A F RM V
Sbjct: 269 TLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSET 328
Query: 248 -------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
D+V+WNA+I+G+ Q+ EAL LF+ + + P
Sbjct: 329 TMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCP 388
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI------DVFTGSALIDMYSKCGSLK 336
+ T +L A +++GR+ H+ V + G D+F G++LIDMY KCGS++
Sbjct: 389 THYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVE 448
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
+ +FE K+ SWN MI Y ++G ++ELF++MLE G + + VT+I L ACS
Sbjct: 449 EGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACS 508
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
H GLVE+G F SM + +G+ K+HY C+VD+L R+G + EA DL+ +P +
Sbjct: 509 HAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVW 568
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
+ + C +H L + E+ FE+ +V+L+N+ + G W +A ++RK+M+ +
Sbjct: 569 SSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRR 628
Query: 517 NVQKQPGFSRVE 528
V KQPG S ++
Sbjct: 629 GVVKQPGCSWID 640
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 177/370 (47%), Gaps = 50/370 (13%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
F+ +L CV L + + VH Q F +V + N LID+Y KCG L AR+VF M
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
ER N F++N+II++ R G + +
Sbjct: 87 ER-----------------------------------NVFSFNSIISTLMRWGFVDESAW 111
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
FS M + D +WN+MI+GFAQ R EAL F M N+ + L A
Sbjct: 112 LFSLMPEK----DQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACS 167
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
+++G +IH L+ + +DVF GS LID YSKCG + AR +F+ KNV SWN
Sbjct: 168 RLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNC 227
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF----RSM 411
+I CY ++G ++E F RM E G + +EVTL SV+SAC+ ++G++I +S
Sbjct: 228 LITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSD 287
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM---YVTNSMAGAFRNGCNIHGR 468
K R + + +VDM + GR+ EA + ++P+ +M + ++
Sbjct: 288 KFRNDLILGN----ALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAA 343
Query: 469 RDLAVTMGEE 478
R + T+ ++
Sbjct: 344 RSMFATIKQK 353
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 173/378 (45%), Gaps = 50/378 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C A ++G Q+HA + +D N L + LV +YA CG VN AR VFD++
Sbjct: 260 LASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRM 319
Query: 74 PNPNVF-----------------------------MLNWMVMASAFT--GNFQEAIGYFS 102
P N +++W + + +T G +EA+G F
Sbjct: 320 PVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFR 379
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF------ENDVSVGNALID 156
+++ +TF +L A L D++ G+Q H+ + GF E D+ VGN+LID
Sbjct: 380 MLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLID 439
Query: 157 MYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT 216
MY KCG + RVF M E+D VSW +MI GY EA+ LF++M G +P+ T
Sbjct: 440 MYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVT 499
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
+ + + G +F MT E G +P + M+ ++ EA L + M
Sbjct: 500 MIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESM 559
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA---LIDMYSKC 332
+P+ V + +L A + +I +G+ + + ID + L +MYS+
Sbjct: 560 ---PKQPDAVVWSSLLSACKVHRNITLGKYVAEKI----FEIDPTSSGPYVLLANMYSEL 612
Query: 333 GSLKDARTLFEITRIKNV 350
G DA ++ ++ R + V
Sbjct: 613 GRWGDAVSVRKLMRRRGV 630
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 269/476 (56%), Gaps = 14/476 (2%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM----REFIYRCNKFTF 116
G + A LVFD+IP P+ FM N ++ +A T ++A+ ++ M R +K TF
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 117 SIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE 176
VL+AC + G QVHA + G E+D V NALI M++ CG L A +F G
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAF 236
D V+W++MI+G + A LF+ ++ L ++N +I +YA+RGD A
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDL----VSWNVMITAYAKRGDMALAREL 201
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F ++ D+V+WN MISG+ + AL+LF+ M G KP+ VT+ +L A
Sbjct: 202 FDQVPER----DVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACAD 257
Query: 297 TGSIQIGREIHALVCRMGLH--IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
+G + +G+ +H+ + M V G+ALIDMY+KCGS+K A +F R K+V++WN
Sbjct: 258 SGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWN 317
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
+++G HG V SI++FE+ML+ +R +E+T ++VL ACSHGG+V+KG E F M+ +
Sbjct: 318 SIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHK 377
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVT 474
Y V+ + +HY C+VDML R+G + EA++ + + + + + C +HG +LA
Sbjct: 378 YRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKH 437
Query: 475 MGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+ + + +V+LSNI A+ GEW +E +RK+M + V K+ R+ R
Sbjct: 438 ANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNKEADSERLHHR 493
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 133/258 (51%), Gaps = 10/258 (3%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYR 110
++ YA GD+ AR +FD++P +V ++W VM S + G+ A+ F M+ +
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDV--VSWNVMISGYVRCGSHLHALELFEQMQRMGEK 242
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN--DVSVGNALIDMYSKCGLLCSAR 168
+ T +L AC D+ G+++H+ + M N V +GNALIDMY+KCG + SA
Sbjct: 243 PDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAH 302
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
VF M ++DV +W S++ G V E++ +FE+M + P++ T+ A++ + + G
Sbjct: 303 EVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGG 362
Query: 229 DSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
+ FF+ M + V P++ + M+ ++ EA + M +PN+V
Sbjct: 363 MVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTM---KCEPNSVIW 419
Query: 288 TGVLQAGGLTGSIQIGRE 305
+L A + G I++ +
Sbjct: 420 RTLLSACRVHGEIELAKH 437
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-------LKSKLVGVYAGCGDVNSARLVFD 71
LL C S L G+++H+ L ++FS L + L+ +YA CG + SA VF
Sbjct: 251 LLSACADSGDLDVGQRLHSSLS----DMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFW 306
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+ + +V N +V A G+ E+I F M + R ++ TF VL AC + K
Sbjct: 307 SMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDK 366
Query: 132 GKQ-VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGY 189
G++ + + + E ++ ++DM + GLL A M E + V W +++S
Sbjct: 367 GREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSA- 425
Query: 190 CNV 192
C V
Sbjct: 426 CRV 428
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 293/551 (53%), Gaps = 45/551 (8%)
Query: 31 QGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
Q KQ+HA L L FS L +KL+ + GD+ AR VFD +P P +F N ++
Sbjct: 36 QLKQIHARLLVLGLQ-FSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 94
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
+ +FQ+A+ +S M+ + FTF +LKAC GL ++ G+ VHA ++GF+ DV
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 149 SVGNALIDMYSKCGLLCSARRVFHG--MFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
V N LI +Y+KC L SAR VF G + ER +VSWT+++S Y + EA+ +F +M+
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 207 LEGLEP---------NQFTY-------NAIIAS-------------------YARRGDSN 231
++P N FT +I AS YA+ G
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A F +M + P+L+ WNAMISG+A++ EA+ +F M+ ++P+ +++T +
Sbjct: 275 TAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A GS++ R ++ V R DVF SALIDM++KCGS++ AR +F+ T ++V
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
W+AMI YG HG +I L+ M G+ N+VT + +L AC+H G+V +G F M
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 450
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
+ + + ++HYACV+D+L R+G + +AY++++ +P+ ++ GA + C H +L
Sbjct: 451 AD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVEL 509
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
++ F + +V LSN+ AA W +R MKEK + K G S VE R
Sbjct: 510 GEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRG 569
Query: 532 EFVEKEVQNES 542
V ++S
Sbjct: 570 RLEAFRVGDKS 580
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 137/264 (51%), Gaps = 5/264 (1%)
Query: 29 LRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+QG+ +HA + L I L L +YA CG V +A+++FDK+ +PN+ + N M+
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
A G +EAI F M R + + + + AC + +++ + ++ + + +D
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V + +ALIDM++KCG + AR VF +RDVV W++MI GY + EA+ L+ M+
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
G+ PN T+ ++ + G + FF+RM P + +I ++ ++
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQ 477
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVL 291
A ++ K M V +P VTV G L
Sbjct: 478 AYEVIKCMPV---QP-GVTVWGAL 497
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 276/505 (54%), Gaps = 14/505 (2%)
Query: 33 KQVHALLCTNDLNIFSLKSKLVGVYAGC----GDVNSARLVFDKIPNPNVFMLNWMVMAS 88
KQ+HA + N + + + +YA G + A +F I P+ FM N M+ S
Sbjct: 30 KQIHASMIVKGFNSNTSALREL-IYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGS 88
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
A + + AI +S M R +KFTF VLKAC L +K G VH ++GFE++
Sbjct: 89 AQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNT 148
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
V N LI ++ CG L AR +F G +RDVV+W+++ +GY ++ A LF+ M ++
Sbjct: 149 FVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVK 208
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
L ++N +I YA+RG+ +A F + D+VTWNAMI+G+ +A
Sbjct: 209 DL----VSWNVMITGYAKRGEMESARKLFDEVPKR----DVVTWNAMIAGYVLCGSNQQA 260
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH-IDVFTGSALID 327
L++F+ M G P+ VT+ +L A G + G+ IH + MG + V G+ALID
Sbjct: 261 LEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALID 320
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MY+KCGS+ A +F+ R K+V++WN+++G HG + SI LF M + +R +E+T
Sbjct: 321 MYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEIT 380
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
+ VL ACSH G VE+G + F M++ Y ++ + HY C+VD+L R+G + EA+D + +
Sbjct: 381 FVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTM 440
Query: 448 PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAE 507
+ + C IHG +L + +M + +V+LSNI A+ GEW E
Sbjct: 441 KIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVE 500
Query: 508 NLRKIMKEKNVQKQPGFSRVEKRNE 532
+RK+M + V+K+ G S +E N+
Sbjct: 501 KVRKLMDDSGVRKEAGCSLIEGDNK 525
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 284/544 (52%), Gaps = 42/544 (7%)
Query: 27 KALRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVF-DKIPNPNVFMLNWM 84
K L +GK++H+ + N LN + L+ +Y+ C +N A +F D NVF N +
Sbjct: 51 KNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAI 110
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ G +E ++ MR +KFTF +KAC+ +L+IKK +H + + G
Sbjct: 111 ISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIKK---IHGLLFKFGL 167
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
E DV +G+AL++ Y K GL+ A+ F + RDVV W +M++GY + + + + F R
Sbjct: 168 ELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRR 227
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAA---FAFFSRMTAEGFVP-------------- 247
M E + P++FT +++ +A GD N F +M + V
Sbjct: 228 MNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKC 287
Query: 248 --------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
D+ +WN+++S Q + L+L ML +GI+P+ VTVT VL A
Sbjct: 288 IEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPA 347
Query: 294 GGLTGSIQIGREIHALVCRMGLHID------VFTGSALIDMYSKCGSLKDARTLFEITRI 347
++ GREIH + GL D V +A+IDMY+KCGS++DA +FE
Sbjct: 348 CSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSN 407
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
K+VASWN MI YG HG + ++E+F RM E ++ +EVT + VLSACSH G V +G
Sbjct: 408 KDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNF 467
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
MK +Y V + EHY CV+DML R+G++ EAY+L +P+ + A C +H
Sbjct: 468 LVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHK 527
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
LA + FE+ +V++SN+ A G + E +R M+++NV+K PG S +
Sbjct: 528 HAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWI 587
Query: 528 EKRN 531
E +N
Sbjct: 588 ELKN 591
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 208/440 (47%), Gaps = 52/440 (11%)
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG-MFERD 178
L+A ++ KGK++H+ GF N +LI+MYSKC + A +F E +
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEIN 103
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------- 217
V ++ ++ISG+ +E +++M+ EG+ P++FT+
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIKKIHGLLF 163
Query: 218 -----------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
+A++ Y + G A F + + D+V WNAM++G+AQ +
Sbjct: 164 KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELP----IRDVVLWNAMVNGYAQIGQFE 219
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
L+ F+ M + P+ TVTGVL + G + GR IH +MG V ++LI
Sbjct: 220 MVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLI 279
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
DMY KC ++DA +FE+ R K++ SWN+++ + + G D ++ L +RML G++ + V
Sbjct: 280 DMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLV 339
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE-----HYACVVDMLCRSGRMVEAY 441
T+ +VL ACSH + G EI M K K+ V+DM + G M +A+
Sbjct: 340 TVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAH 399
Query: 442 DLLRQVPMYVTNSMAGAFR---NGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNI 496
+ + ++N ++ G +HG + A+ M E+ L KPD FV + +
Sbjct: 400 LVFER----MSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQL-KPDEVTFVGVLSA 454
Query: 497 CAADGEWHEAENLRKIMKEK 516
C+ G + N MK K
Sbjct: 455 CSHAGFVSQGRNFLVQMKSK 474
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 281 KPNNVTV-TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+P N+T LQA ++ G+EIH+ + G + ++LI+MYSKC + A
Sbjct: 33 QPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFAL 92
Query: 340 TLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC--- 395
++F + T NV ++NA+I + +G + E +++M EG+ ++ T + AC
Sbjct: 93 SIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDV 152
Query: 396 -----SHGGLVEKGLEI 407
HG L + GLE+
Sbjct: 153 LEIKKIHGLLFKFGLEL 169
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 291/543 (53%), Gaps = 49/543 (9%)
Query: 28 ALRQGKQVHALLC-TNDLNIFSLKSKLVGVYA--GCGDVNSARLVFDKIPNPNVFMLNWM 84
++ + KQ HALL T+ L+ SKL+ A GD+N AR +F ++ NP+ F+ N M
Sbjct: 23 SISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTM 82
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ A + N EA+ + M E + +T+ VL AC L +K G++ H + GF
Sbjct: 83 IRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGF 142
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+D+ V NALI Y CG A VF RDVV+W MI+ + N ++A L +
Sbjct: 143 GSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDE 202
Query: 205 M-KLEGLEPNQFTY-----------------------------------NAIIASYARRG 228
M KL+ L P++ T NAI+ Y +
Sbjct: 203 MTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCD 262
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
D +A F+R+ + D+++W +M+SG A+S EAL LF+ M ++ I+ + +T+
Sbjct: 263 DIESAQEVFNRIREK----DVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLV 318
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
GVL A TG++ G+ IH L+ + ++ D+ +AL+DMY+KCGS+ A +F R++
Sbjct: 319 GVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR 378
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
NV +WNA+IG HG + +I LF++M + + ++VT I++L ACSH GLV++GL +F
Sbjct: 379 NVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMF 438
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
++MK ++ ++ EHY CVVD+LCR+ ++ +A + +P+ + + C G
Sbjct: 439 QAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGH 498
Query: 469 RDLAVTMGEEFFEMGLRKPDG---FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
DLA +G E+ +PD +VMLSN+ A +W A LRK MK K ++K PG S
Sbjct: 499 FDLAEKIGRRVIEL---EPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCS 555
Query: 526 RVE 528
+E
Sbjct: 556 WIE 558
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 191/415 (46%), Gaps = 54/415 (13%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVN 64
P++N + ++ L C + A++ G++ H + N ++F + + L+ Y CG
Sbjct: 108 PVDNYTYPFV---LAACARLGAVKLGRRFHCEVLKNGFGSDLFVINA-LIQFYHNCGSFG 163
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI----YRCNKFTFSIVL 120
A VFD+ +V N M+ A G ++A F L+ E R ++ T ++
Sbjct: 164 CACDVFDESTVRDVVTWNIMINAHLNKGLSEKA---FDLLDEMTKLDNLRPDEVTMVSLV 220
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
AC L ++++GK +H+ + ++G + ++ V NA++DMY KC + SA+ VF+ + E+DV+
Sbjct: 221 PACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVL 280
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------- 217
SWTSM+SG EA+ LF++M+L +E ++ T
Sbjct: 281 SWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLI 340
Query: 218 ------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
A++ YA+ G + A F RM V ++ TWNA+I G A
Sbjct: 341 DKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR----VRNVFTWNALIGGLAMHGHG 396
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSA 324
+A+ LF M + P++VT +L A G + G + A+ + + +
Sbjct: 397 EDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGC 456
Query: 325 LIDMYSKCGSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLE 378
++D+ + + DA E IK N W ++G G D + ++ R++E
Sbjct: 457 VVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIE 511
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 162/542 (29%), Positives = 275/542 (50%), Gaps = 32/542 (5%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C A G Q+HA + ++ + + +YA C + AR VF+ PNP
Sbjct: 281 CAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSH 340
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
N +++ A EA+ F +++ ++ + S L AC + +G Q+H +A +
Sbjct: 341 NALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVK 400
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
G + ++ V N ++DMY+KCG L A +F M +D VSW ++I+ + V+E + L
Sbjct: 401 CGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLAL 460
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL------------ 249
F M +EP+ +T+ +++ + A + N R+ G D
Sbjct: 461 FVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCK 520
Query: 250 -------------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
V+WN++ISGF+ K+ AL F ML G+ P+N T V
Sbjct: 521 CGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATV 580
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L ++++G++IH + ++ LH DV+ S ++DMYSKCG+++D+R +FE ++
Sbjct: 581 LDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDY 640
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+W+AMI Y HG+ + +I+LFE M + ++ N ISVL AC+H G V+KGL FR
Sbjct: 641 VTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFRE 700
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M+ YG+ EHY+C+VD+L RSG++ EA +L+ +P + + C + G +
Sbjct: 701 MRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVE 760
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+A ++ + +V+LSN+ A G W E +R MK ++K+PG S ++ R
Sbjct: 761 VAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVR 820
Query: 531 NE 532
+E
Sbjct: 821 DE 822
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 153/558 (27%), Positives = 263/558 (47%), Gaps = 73/558 (13%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNS 65
P L+ +++ KC KA+ GKQ HA + T + + + L+ Y C ++N
Sbjct: 35 PTKKLTFSHI---FQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNY 91
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQ------------------------------ 95
A VFDK+P +V N M+ A GN +
Sbjct: 92 AFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFH 151
Query: 96 -EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNAL 154
++I F+ MR + + TF++VLKAC G+ D G QVH +A QMGF++DV G AL
Sbjct: 152 RKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTAL 211
Query: 155 IDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ 214
+DMYS C L A +F M ER+ V W+++I+GY + E + L++ M EG+ +Q
Sbjct: 212 VDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQ 271
Query: 215 FTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFV----------------------- 246
T+ + S A G A+A + + V
Sbjct: 272 ATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNT 331
Query: 247 ---PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
P + NA+I G+A+ + EAL++F+ + S + + ++++G L A G
Sbjct: 332 FPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG 391
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
++H L + GL ++ + ++DMY+KCG+L +A +F+ IK+ SWNA+I + ++
Sbjct: 392 IQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQN 451
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKE 422
V+ ++ LF ML M ++ T SV+ AC+ + G+E+ R +K G+
Sbjct: 452 EHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVG 511
Query: 423 HYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM 482
+ ++DM C+ G +VEA + ++ T S + +G + + + A++ ++
Sbjct: 512 --SAIIDMYCKCGMLVEAEKIHERLEERTTVSW-NSIISGFSSEKQGENALSYFSRMLQV 568
Query: 483 GLRKPDGFVMLS--NICA 498
G+ PD F + +ICA
Sbjct: 569 GV-IPDNFTYATVLDICA 585
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 177/561 (31%), Positives = 288/561 (51%), Gaps = 41/561 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + + G+ +H L L + + S LVG+YA C + A +FD++P+ +
Sbjct: 112 VLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKD 171
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V N ++ +G F+EA+ YF +MR F + + T + + +C LLD+ +G+++H
Sbjct: 172 VACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHK 231
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
GF D V AL+DMY KCG L A VF M + VV+W SMI+GY
Sbjct: 232 ELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGIS 291
Query: 198 AVVLFERMKLEG-----------------------------------LEPNQFTYNAIIA 222
+ LF+RM EG ++P+ F ++++
Sbjct: 292 CIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMD 351
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y + G +A F M V+WN MISG+ + +AL+LF M S ++P
Sbjct: 352 LYFKCGKVESAETIFKLMPKT----TTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEP 407
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ +T T VL A +++ GREIH L+ L + AL+DMY+KCG++++A +F
Sbjct: 408 DAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVF 467
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ +++ SW +MI YG HG V ++ELF ML+ ++ + VT +++LSACSH GLV+
Sbjct: 468 KCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVD 527
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN-SMAGAFRN 461
GL F M YG+ EHY+C++ +L R+GR+ EAY++L+ P + + +
Sbjct: 528 DGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFS 587
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C +H DL V + E + +++LSN+ A+ G+W E +R MK+ ++K
Sbjct: 588 ACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKN 647
Query: 522 PGFSRVEKRNEFVEKEVQNES 542
PG S +E + V V++ S
Sbjct: 648 PGCSWIEINEKIVPFFVEDNS 668
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 250/531 (47%), Gaps = 52/531 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL + SK+L+QGK +H + T L N + L+ +Y C + A+ VFD I NP
Sbjct: 9 LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPF 68
Query: 78 VFMLNWMVMASAFTGN--FQEAIGYFS-LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
L +MA +T N + EA+G F LM + + +T+ VLKAC GL + G+
Sbjct: 69 EISLCNGLMA-GYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQM 127
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + G D+ VG++L+ MY+KC A ++F M ++DV W ++IS Y K
Sbjct: 128 IHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGK 187
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD------ 248
+EA+ F M+ G EP+ T I+S AR D + + GF D
Sbjct: 188 FEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAA 247
Query: 249 -------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+V WN+MI+G+ ++LFK M G+KP
Sbjct: 248 LVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPT 307
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
T+T L A + + G+ +H + R + D+F S+L+D+Y KCG ++ A T+F+
Sbjct: 308 LTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFK 367
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ SWN MI Y G + ++ LF M + + + +T SVL+ACS +EK
Sbjct: 368 LMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEK 427
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFR 460
G EI + ER + ++ ++DM + G + EA+ + + +P + SM A+
Sbjct: 428 GREIHNLIVER-NLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYG 486
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA-------DGEWH 504
+ HGR A+ + E + + KPD L+ + A DG +H
Sbjct: 487 S----HGRVYEALELFAEMLQSNV-KPDRVTFLAILSACSHAGLVDDGLYH 532
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 296/510 (58%), Gaps = 15/510 (2%)
Query: 27 KALRQGKQVHA----LLCTNDLNIFSLKSKLVGVYAGCGDVNS--ARLVFDKIPNPNVFM 80
K+++ KQ+HA + + D + ++ ++L + A ++ A + ++ PN+ +
Sbjct: 48 KSIKGLKQIHASIIKTMPSPDAQL-TISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPL 106
Query: 81 LNWMV--MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
N ++ +A++ + + + Y ++ + I N +T VLKAC +++G++VH
Sbjct: 107 YNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDN-YTIPFVLKACAESRAVREGEEVHGQ 165
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
A +MG +DV V N L+ MY+ C ++ SAR+VF +RD+VSWT+MI GY + E
Sbjct: 166 AIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREG 225
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
V L+ ++ + + F NA++ Y + GD+N A F M V ++V+WN+MISG
Sbjct: 226 VGLY-IIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMP----VKNVVSWNSMISG 280
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
AQ + E+L +F+ M G+KP++VT+ VL + G +++G+ +HA + R + D
Sbjct: 281 LAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRAD 340
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
F G+AL+DMY+KCGS+ A +F+ K+V S+ AMI HG +++LF M +
Sbjct: 341 GFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPK 400
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
G+ +EVT + VL+ACSH GLVE+G + F M Y ++ EHY C+VD+L R+G +
Sbjct: 401 MGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLIN 460
Query: 439 EAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
EA + +R +P+ + GA C IHG+ +L ++ ++ ++ RK +V++SNI +
Sbjct: 461 EAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYS 520
Query: 499 ADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ W +A LRK MKE+N++K PG S +E
Sbjct: 521 SANRWRDALKLRKTMKERNLEKTPGCSSIE 550
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 178/427 (41%), Gaps = 101/427 (23%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C +S+A+R+G++VH L + + + L+ +YA C + SAR VFD P +
Sbjct: 146 VLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRD 205
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ M+ G +E +G + I+ + V L
Sbjct: 206 LVSWTTMIQGYVKMGFAREGVGLY----------------IIRNSNVNL----------- 238
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
DV VGNAL+DMY KCG AR+VF M ++VVSW SMISG + E
Sbjct: 239 ---------DVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKE 289
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGD---SNAAFAFFSR--MTAEGFV------ 246
++ +F +M+ G++P+ T A++ S A G A+ R + A+GF+
Sbjct: 290 SLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVD 349
Query: 247 --------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
D+ ++ AMI G A + +AL LF M GI+P+ VT
Sbjct: 350 MYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVT 409
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
GVL A G ++ GR+ +D T++ +
Sbjct: 410 FVGVLTACSHVGLVEEGRKY----------------------------FEDMSTIYNLR- 440
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+ + M+ G+ G+++ + E M + + L ++L AC G VE G
Sbjct: 441 -PQLEHYGCMVDLLGRAGLINEAEEFIRNM---PIEPDAFVLGALLGACKIHGKVELGES 496
Query: 407 IFRSMKE 413
+ + +++
Sbjct: 497 VMKKIEK 503
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 286/538 (53%), Gaps = 63/538 (11%)
Query: 32 GKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
GKQVH+ L C + F + + L+ +YA C D S VFD++ N N ++ A A
Sbjct: 194 GKQVHSKLIACGFKGDTF-VGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEA 252
Query: 90 FTGNFQEAIGYFSLMREFI--YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
G+F +A+ F M+E + ++FTF+ +L C + +G+Q+HA + +
Sbjct: 253 QFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKN 312
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
+ V L+ MYS+CG L A+ +F+ M ER+ SW SMI GY + EA+ LF++M+L
Sbjct: 313 IIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQL 372
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAA-----FAFFSRMTAEGFVP--------------- 247
G++P+ F+ +++++S DS F + M EG +
Sbjct: 373 NGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDY 432
Query: 248 -------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
+ WN++++G+A + E+ F ML S I+ + +T+ +
Sbjct: 433 AWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTI---- 488
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
++ LV +AL+DMYSKCG++ ART+F+ KN+ SWN
Sbjct: 489 -----------VNLLVLE----------TALVDMYSKCGAITKARTVFDNMNGKNIVSWN 527
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
AMI Y KHG ++ L+E M ++GM NEVT +++LSACSH GLVE+GL IF SM+E
Sbjct: 528 AMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQED 587
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVT 474
Y ++ EHY C+VD+L R+GR+ +A + + ++P+ S GA C +H D+
Sbjct: 588 YNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRL 647
Query: 475 MGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ FE+ + P +V++SNI AA G W E E++R++MK K V+K PG S +E +E
Sbjct: 648 AAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSE 705
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 220/430 (51%), Gaps = 47/430 (10%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYA--GC-GD 62
P ++++ L+ C+ S + ++GK +H + +N N + L +K++ +YA GC D
Sbjct: 65 PASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDD 124
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
+ AR +F+++P N+ N M++A A ++ EA G F M + + FTF+ L+
Sbjct: 125 LCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRV 184
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C L GKQVH+ GF+ D VGNALIDMY+KC S +VF M ER+ V+W
Sbjct: 185 CGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTW 244
Query: 183 TSMISGYCNVSKVDEAVVLFERMK--LEGLEPNQFTYNAIIA------------------ 222
S+IS ++A+VLF RM+ +G++P+QFT+ ++
Sbjct: 245 NSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL 304
Query: 223 -----------------SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
Y+ G N A F+RM + +WN+MI G+ Q+
Sbjct: 305 IRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAER----NAYSWNSMIEGYQQNGET 360
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EAL+LFK M ++GIKP+ +++ +L + Q GRE+H + R + + L
Sbjct: 361 QEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVL 420
Query: 326 IDMYSKCGSLKDARTLFE--ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
+DMY+KCGS+ A +++ I + +N A WN+++ Y G+ S F MLE +
Sbjct: 421 VDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEY 480
Query: 384 NEVTLISVLS 393
+ +T++++++
Sbjct: 481 DVLTMVTIVN 490
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 175/380 (46%), Gaps = 53/380 (13%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL---LCSAR 168
N +S +++ C+ ++GK +H G+ D + ++ +Y++ G LC AR
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
++F M ER++ +W +MI Y V EA +F+RM G+ P+ FT+
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALR 189
Query: 218 ------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
NA+I YA+ D + F M + VTWN
Sbjct: 190 SRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER----NQVTWN 245
Query: 254 AMISGFAQSKRENEALKLFKGMLVS--GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
++IS AQ N+AL LF M S GI+P+ T T +L + GR+IHA +
Sbjct: 246 SIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLI 305
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
R + ++ + L+ MYS+CG L A+ +F +N SWN+MI Y ++G ++
Sbjct: 306 RANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALR 365
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE----IFRSMKERYGVKISKEHYACV 427
LF++M G++ + +L S+LS+C +KG E I R+ E G+ +
Sbjct: 366 LFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGIL-----QVVL 420
Query: 428 VDMLCRSGRMVEAYDLLRQV 447
VDM + G M A+ + Q
Sbjct: 421 VDMYAKCGSMDYAWKVYDQT 440
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 181/540 (33%), Positives = 281/540 (52%), Gaps = 45/540 (8%)
Query: 28 ALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
L G+++H A N+F + + L+ +Y+ G AR +FD +P ++ N M+
Sbjct: 230 TLVDGRRIHCWAFKLGFQWNVF-VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMI 288
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
GN +A+ MR + N T +L C L DI +H + G E
Sbjct: 289 SGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLE 348
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
D+ V NALI+MY+K G L AR+ F MF DVVSW S+I+ Y A F +M
Sbjct: 349 FDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKM 408
Query: 206 KLEGLEPNQFTY------------------------------------NAIIASYARRGD 229
+L G +P+ T NA++ YA+ G
Sbjct: 409 QLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGL 468
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVT 288
++A F + V D+++WN +I+G+AQ+ +EA++++K M I PN T
Sbjct: 469 LDSAHKVFEII----LVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWV 524
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
+L A G++Q G IH V + LH+DVF + LID+Y KCG L DA +LF +
Sbjct: 525 SILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE 584
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+ +WNA+I C+G HG + +++LF ML+EG++ + VT +S+LSACSH G VE+G F
Sbjct: 585 SSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF 644
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
R M+E YG+K S +HY C+VD+L R+G + AY ++ +P+ S+ GA C IHG
Sbjct: 645 RLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGN 703
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+L + FE+ + +V+LSNI A G+W + +R + +E+ ++K PG+S +E
Sbjct: 704 IELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIE 763
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 162/531 (30%), Positives = 272/531 (51%), Gaps = 53/531 (9%)
Query: 32 GKQVHALLCT-NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
K +HALL + + ++LV +YA GDV+ +R FD+IP +V+ N M+ A
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 91 TGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
G+F EAIG ++ L+ R + +TF VLKAC L+D G+++H A ++GF+ +V
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVF 251
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE- 208
V +LI MYS+ G AR +F M RD+ SW +MISG +A+ + + M+LE
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 209 ----------------------------------GLEPNQFTYNAIIASYARRGDSNAAF 234
GLE + F NA+I YA+ G+ A
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F +M F+ D+V+WN++I+ + Q+ A F M ++G +P+ +T+ +
Sbjct: 372 KAFQQM----FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIV 427
Query: 295 GLTGSIQIGREIHALVCRMG-LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
+ + R +H + R G L DV G+A++DMY+K G L A +FEI +K+V SW
Sbjct: 428 AQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISW 487
Query: 354 NAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSACSHGGLVEKGLEIF-RSM 411
N +I Y ++G+ +IE+++ M E + + N+ T +S+L A +H G +++G+ I R +
Sbjct: 488 NTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVI 547
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
K + + C++D+ + GR+V+A L QVP ++ A + IHG +
Sbjct: 548 KTNLHLDVFVA--TCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCHGIHGHAEK 604
Query: 472 AVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+ + E + G+ KPD FV L + C+ G E + ++M+E ++
Sbjct: 605 TLKLFGEMLDEGV-KPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKP 654
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 185/549 (33%), Positives = 288/549 (52%), Gaps = 50/549 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ +C KSK L KQ+HA + N + + L SK++ + D+ A LVF+++ PN
Sbjct: 39 LIKQC-KSKNLL--KQIHAQMLINSIPKPNFLLSKIIDL----KDLAYASLVFNQLTKPN 91
Query: 78 VFMLNWMVMASAFT-GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N M+ A T + + + ++ + N FT+ + AC + + GK H
Sbjct: 92 IYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGH 151
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ + G + D V ++LI MY++CG + AR+VF M +RD+VSW SMISGY +
Sbjct: 152 CLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTK 211
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
EA+ LF M+ EG EP++ T +A+I
Sbjct: 212 EAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALI 271
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y + GD +A F M + D+VTWNA+I+G+AQ+ NEA+ LF GM +G
Sbjct: 272 DMYGKCGDLISARRVFDSMPNK----DVVTWNAIITGYAQNGASNEAIVLFNGMREAGPH 327
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ VT+ VL A G++ +G+ + GL DV+ SALIDMY+KCGSL DA +
Sbjct: 328 PDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRV 387
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG--MRANEVTLISVLSACSHGG 399
FE KN SWNAMI HG ++ LF RM ++ ++ N++T I VLSAC H G
Sbjct: 388 FESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAG 447
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LV++G ++F SM +G+ EHY+C+VD+ R+G + EA+DL++++P + G+
Sbjct: 448 LVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSL 507
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C D+ + + F EM L +V+ S I A W ++ +R +M++ V
Sbjct: 508 LGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVS 567
Query: 520 KQPGFSRVE 528
K PG S ++
Sbjct: 568 KTPGCSWID 576
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 284/544 (52%), Gaps = 42/544 (7%)
Query: 27 KALRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVF-DKIPNPNVFMLNWM 84
K L +GK++H+ + N LN + L+ +Y+ C +N A +F D NVF N +
Sbjct: 51 KNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAI 110
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ G +E ++ MR +KFTF +KAC+ +L+IKK +H + + G
Sbjct: 111 ISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIKK---IHGLLFKFGL 167
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
E DV +G+AL++ Y K GL+ A+ F + RDVV W +M++GY + + + + F R
Sbjct: 168 ELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRR 227
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAA---FAFFSRMTAEGFVP-------------- 247
M E + P++FT +++ +A GD N F +M + V
Sbjct: 228 MNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKC 287
Query: 248 --------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
D+ +WN+++S Q + L+L ML +GI+P+ VTVT VL A
Sbjct: 288 IEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPA 347
Query: 294 GGLTGSIQIGREIHALVCRMGLHID------VFTGSALIDMYSKCGSLKDARTLFEITRI 347
++ GREIH + GL D V +A+IDMY+KCGS++DA +FE
Sbjct: 348 CSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSN 407
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
K+VASWN MI YG HG + ++E+F RM E ++ +EVT + VLSACSH G V +G
Sbjct: 408 KDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNF 467
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
MK +Y V + EHY CV+DML R+G++ EAY+L +P+ + A C +H
Sbjct: 468 LVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHK 527
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
LA + FE+ +V++SN+ A G + E +R M+++NV+K PG S +
Sbjct: 528 HAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWI 587
Query: 528 EKRN 531
E +N
Sbjct: 588 ELKN 591
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 209/444 (47%), Gaps = 60/444 (13%)
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF-HGMFERD 178
L+A ++ KGK++H+ GF N +LI+MYSKC + A +F E +
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEIN 103
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------- 217
V ++ ++ISG+ +E +++M+ EG+ P++FT+
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIKKIHGLLF 163
Query: 218 -----------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
+A++ Y + G A F + + D+V WNAM++G+AQ +
Sbjct: 164 KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELP----IRDVVLWNAMVNGYAQIGQFE 219
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
L+ F+ M + P+ TVTGVL + G + GR IH +MG V ++LI
Sbjct: 220 MVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLI 279
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
DMY KC ++DA +FE+ R K++ SWN+++ + + G D ++ L +RML G++ + V
Sbjct: 280 DMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLV 339
Query: 387 TLISVLSACSHGGLVEKGLEIFRSM---------KERYGVKISKEHYACVVDMLCRSGRM 437
T+ +VL ACSH + G EI M K+ V + V+DM + G M
Sbjct: 340 TVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKN----AVIDMYAKCGSM 395
Query: 438 VEAYDLLRQVPMYVTNSMAGAFR---NGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVM 492
+A+ + + ++N ++ G +HG + A+ M E+ L KPD FV
Sbjct: 396 RDAHLVFER----MSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQL-KPDEVTFVG 450
Query: 493 LSNICAADGEWHEAENLRKIMKEK 516
+ + C+ G + N MK K
Sbjct: 451 VLSACSHAGFVSQGRNFLVQMKSK 474
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 281 KPNNVTV-TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+P N+T LQA ++ G+EIH+ + G + ++LI+MYSKC + A
Sbjct: 33 QPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFAL 92
Query: 340 TLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC--- 395
++F + T NV ++NA+I + +G + E +++M EG+ ++ T + AC
Sbjct: 93 SIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDV 152
Query: 396 -----SHGGLVEKGLEI 407
HG L + GLE+
Sbjct: 153 LEIKKIHGLLFKFGLEL 169
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 292/551 (52%), Gaps = 45/551 (8%)
Query: 31 QGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
Q KQ+HA L L FS L +KL+ + GD+ AR VFD +P P +F N ++
Sbjct: 36 QLKQIHARLLVLGLQ-FSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 94
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
+ +FQ+A+ +S M+ + FTF +LKAC GL ++ G+ VHA ++GF+ DV
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 149 SVGNALIDMYSKCGLLCSARRVFHG--MFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
V N LI +Y+KC L SAR VF G + ER +VSWT+++S Y + EA+ +F M+
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMR 214
Query: 207 LEGLEP---------NQFTY-------NAIIAS-------------------YARRGDSN 231
++P N FT +I AS YA+ G
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A F +M + P+L+ WNAMISG+A++ EA+ +F M+ ++P+ +++T +
Sbjct: 275 TAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A GS++ R ++ V R DVF SALIDM++KCGS++ AR +F+ T ++V
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
W+AMI YG HG +I L+ M G+ N+VT + +L AC+H G+V +G F M
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLM 450
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
+ + + ++HYACV+D+L R+G + +AY++++ +P+ ++ GA + C H +L
Sbjct: 451 AD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVEL 509
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
++ F + +V LSN+ AA W +R MKEK + K G S VE R
Sbjct: 510 GEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRG 569
Query: 532 EFVEKEVQNES 542
V ++S
Sbjct: 570 RLEAFRVGDKS 580
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 136/264 (51%), Gaps = 5/264 (1%)
Query: 29 LRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+QG+ +HA + L I L L +YA CG V +A+++FDK+ +PN+ + N M+
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
A G +EAI F M R + + + + AC + +++ + ++ + + +D
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V + +ALIDM++KCG + AR VF +RDVV W++MI GY + EA+ L+ M+
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
G+ PN T+ ++ + G + FF+ M P + +I ++ ++
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQ 477
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVL 291
A ++ K M V +P VTV G L
Sbjct: 478 AYEVIKCMPV---QP-GVTVWGAL 497
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 278/487 (57%), Gaps = 17/487 (3%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N S + L G +A G + AR +FD++P NV N M+ A + EAI F M
Sbjct: 232 NTVSWVTMLCG-FARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEM 290
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
E N +++ V+ V + + + +Q+ QM + N V+ A+I Y + +
Sbjct: 291 PE----KNSISWTTVINGYVRMGKLDEARQL---LNQMPYRN-VAAQTAMISGYVQNKRM 342
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
AR++F+ + RDVV W +MI+GY ++DEA+ LF++M ++ + ++N ++ASY
Sbjct: 343 DDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQM----VKKDIVSWNTMVASY 398
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
A+ G +AA F M + ++V+WN++ISG Q+ +ALK F M G KP+
Sbjct: 399 AQVGQMDAAIKIFEEMKEK----NIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQ 454
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
T L + ++Q+G+++H LV + G D+F +ALI MY+KCGS+ A LF+
Sbjct: 455 STFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKD 514
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+V SWN++I Y +G +++LF +M EG+ +EVT + +LSACSH GL+++G
Sbjct: 515 IDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQG 574
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
L++F+ M + Y ++ EHYAC+VD+L R+GR+ EA+ L+R + + + GA C
Sbjct: 575 LKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACR 634
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
IHG +LA E+ E K +V+LSN+ A G W E +R++MKEK +KQPG+
Sbjct: 635 IHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGW 694
Query: 525 SRVEKRN 531
S +E +N
Sbjct: 695 SWIELQN 701
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 187/388 (48%), Gaps = 44/388 (11%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ ++ +A G ++ AR +FD +P N+ N M+ A +EA F M
Sbjct: 50 NSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTR--- 106
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ +++++++ ++ K + + + + ++ + NA++ Y+K ARR+
Sbjct: 107 -DLYSWTLMITCYTRNGELAKARNLFNL---LPYKWNPVCCNAMVAGYAKNRQFDEARRL 162
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M +D+VSW SM++GY ++ + FE M E + ++N ++ + GD
Sbjct: 163 FDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMA----ERDVVSWNLMVDGFVEVGDL 218
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
N+++ FF ++ P+ V+W M+ GFA+ + EA +LF M + + N +
Sbjct: 219 NSSWEFFEKIPN----PNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAY 274
Query: 291 LQ----------------------AGGLTGSIQIGR--EIHALVCRMGLHIDVFTGSALI 326
+Q + G +++G+ E L+ +M + +V +A+I
Sbjct: 275 VQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMP-YRNVAAQTAMI 333
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
Y + + DAR +F I++V WN MI Y + G +D ++ LF++M+++ + V
Sbjct: 334 SGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDI----V 389
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKER 414
+ +++++ + G ++ ++IF MKE+
Sbjct: 390 SWNTMVASYAQVGQMDAAIKIFEEMKEK 417
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 185/411 (45%), Gaps = 56/411 (13%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFS 102
NI S S ++ Y V AR +FDK+P +++ +W +M + +T G +A F+
Sbjct: 76 NIVSWNS-MIAAYLHNDRVEEARQLFDKMPTRDLY--SWTLMITCYTRNGELAKARNLFN 132
Query: 103 LMREFIYRCNKFTFSIVLKACVG---------LLDIKKGKQVHAVATQM-GF-------- 144
L+ Y+ N + ++ L D K + + + + G+
Sbjct: 133 LLP---YKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRL 189
Query: 145 ---------ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
E DV N ++D + + G L S+ F + + VSW +M+ G+ K+
Sbjct: 190 GLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKI 249
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
EA LF++M + N +NA+IA+Y + + A + F M + + ++W +
Sbjct: 250 AEARRLFDQMPIR----NVVAWNAMIAAYVQNCHVDEAISLFMEMPEK----NSISWTTV 301
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
I+G+ + + +EA +L M + ++G +Q + + QI +I
Sbjct: 302 INGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIR------ 355
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
DV + +I YS+CG + +A LF+ K++ SWN M+ Y + G +D++I++FE
Sbjct: 356 --DVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEE 413
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
M E+ N V+ S++S + G L+ F M G K + +AC
Sbjct: 414 MKEK----NIVSWNSLISGLTQNGSYLDALKSFMLMGHE-GQKPDQSTFAC 459
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 162/335 (48%), Gaps = 28/335 (8%)
Query: 117 SIVLKACVGLLDIKKGKQVH---AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
S V + + + + K Q+ V M +N V+ N++I ++K G + AR++F G
Sbjct: 13 SYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVT-HNSMISAFAKNGRISDARQLFDG 71
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA 233
M +R++VSW SMI+ Y + +V+EA LF++M L +++ +I Y R G+ A
Sbjct: 72 MPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDL----YSWTLMITCYTRNGELAKA 127
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
F+ + + + V NAM++G+A++++ +EA +LF M + N +TG +
Sbjct: 128 RNLFNLLP---YKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRN 184
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
G + +Q E+ DV + + ++D + + G L + FE N SW
Sbjct: 185 GEMRLGLQFFEEM--------AERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSW 236
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
M+ + + G + + LF++M + A + + + C V++ + +F M E
Sbjct: 237 VTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCH----VDEAISLFMEMPE 292
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ + + V++ R G++ EA LL Q+P
Sbjct: 293 KNSIS-----WTTVINGYVRMGKLDEARQLLNQMP 322
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C L C AL+ GKQ+H L+ + ++F + + L+ +YA CG ++SA L+F I +
Sbjct: 459 CGLSSCAHLAALQVGKQLHQLVMKSGYATDLF-VSNALITMYAKCGSISSAELLFKDIDH 517
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGK 133
+V N ++ A A GN +EA+ F M ++ TF +L AC VGL+D +G
Sbjct: 518 FDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLID--QGL 575
Query: 134 QVHAVATQ-MGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
++ Q E ++D+ + G L A ++ GM + W +++ G C
Sbjct: 576 KLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALL-GACR 634
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
+ E + F KL EP++ T N ++ S
Sbjct: 635 IHGNLE-LAKFAAEKLLEFEPHK-TSNYVLLS 664
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 288/550 (52%), Gaps = 42/550 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C AL GKQ H+ ++ L+ L+ +Y C D+ +A F N
Sbjct: 378 LLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETEN 437
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V + N M++A N E+ F+ M+ N+FT+ +L+ C L + G+Q+H
Sbjct: 438 VVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHT 497
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ GF+ +V V + LIDMY+K G L A ++F + E+DVVSWT+MI+GY K E
Sbjct: 498 QVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAE 557
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
A+ LF+ M+ +G+ + + NA+++
Sbjct: 558 ALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVS 617
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YAR G A+ F ++ F D ++WN++ISGFAQS EAL LF M +G +
Sbjct: 618 LYARCGKVRDAYFAFDKI----FSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEI 673
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA-RTL 341
N+ T + A ++++G++IHA++ + G + + LI +Y+KCG++ DA R
Sbjct: 674 NSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQF 733
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
FE+ KN SWNAM+ Y +HG ++ LFE M + G+ N VT + VLSACSH GLV
Sbjct: 734 FEMPE-KNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLV 792
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
++G++ F+SM+E +G+ EHYACVVD+L RSG + A + ++P+ + +
Sbjct: 793 DEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLS 852
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C +H D+ E+ + +V+LSN+ A G+W + R++MK++ V+K+
Sbjct: 853 ACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKE 912
Query: 522 PGFSRVEKRN 531
PG S +E N
Sbjct: 913 PGRSWIEVNN 922
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 251/516 (48%), Gaps = 40/516 (7%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C+ S G ++H +L L +L+ +Y GD++ A VFD++P
Sbjct: 74 LLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRP 133
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC-VGLLDIKKGKQVH 136
+ N ++ +G F M + + ++ T++ VL+ C G + +++H
Sbjct: 134 LSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIH 193
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A G+EN + V N LID+Y K G L SA++VF G+ +RD VSW +M+SG +
Sbjct: 194 ARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEE 253
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIAS-----YARRGDS-----------------NAAF 234
EAV+LF +M G+ P + +++++++ + + G+ NA
Sbjct: 254 EAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALV 313
Query: 235 AFFSRMTAEGFVP-----------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+SR+ F+P D V++N++ISG +Q ++AL+LFK M + +KP+
Sbjct: 314 TLYSRLG--NFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPD 371
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
VTV +L A G++ +G++ H+ + G+ D+ AL+D+Y KC +K A F
Sbjct: 372 CVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFL 431
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
T +NV WN M+ YG ++ S ++F +M EG+ N+ T S+L CS V+
Sbjct: 432 STETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDL 491
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
G +I + + G + + + ++DM + G++ A + R++ S A G
Sbjct: 492 GEQI-HTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWT-AMIAGY 549
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICA 498
H + A+ + +E + G+ + GF + CA
Sbjct: 550 AQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACA 585
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 215/448 (47%), Gaps = 47/448 (10%)
Query: 33 KQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT 91
+++HA T+ N + + L+ +Y G +NSA+ VFD + + ++W+ M S +
Sbjct: 190 EKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRD--SVSWVAMLSGLS 247
Query: 92 --GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
G +EA+ F M + FS VL AC + K G+Q+H + + GF +
Sbjct: 248 QSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETY 307
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
V NAL+ +YS+ G A +VF+ M +RD VS+ S+ISG D+A+ LF++M L+
Sbjct: 308 VCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDC 367
Query: 210 LEPN---------------------QFTYNAIIAS--------------YARRGDSNAAF 234
L+P+ QF AI A Y + D A
Sbjct: 368 LKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAH 427
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
FF E ++V WN M+ + NE+ K+F M + GI+PN T +L+
Sbjct: 428 EFFLSTETE----NVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTC 483
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
++ +G +IH V + G +V+ S LIDMY+K G L A +F + K+V SW
Sbjct: 484 SSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWT 543
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKE 413
AMI Y +H ++ LF+ M ++G+ ++ + S +SAC+ + +G +I ++
Sbjct: 544 AMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVS 603
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAY 441
Y +S + +V + R G++ +AY
Sbjct: 604 GYSDDLSVGN--ALVSLYARCGKVRDAY 629
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 163/359 (45%), Gaps = 42/359 (11%)
Query: 79 FMLNWMVMASAFTGNFQEA--IGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
F+ + ++ A++ + EA I + LM E R N T+ +L C+ G ++H
Sbjct: 32 FLEHNTALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLH 91
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+MGF +V + L+D+Y G L A VF M R + W ++ +
Sbjct: 92 GKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAG 151
Query: 197 EAVVLFERMKLEGLEPNQFTY------------------------------------NAI 220
+ LF RM E ++P++ TY N +
Sbjct: 152 RVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPL 211
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I Y + G N+A F + D V+W AM+SG +QS E EA+ LF M SG+
Sbjct: 212 IDLYFKNGFLNSAKKVFDGLQKR----DSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGV 267
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P + VL A ++G ++H LV + G ++ + +AL+ +YS+ G+ A
Sbjct: 268 YPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQ 327
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F ++ S+N++I + G D ++ELF++M + ++ + VT+ S+LSACS G
Sbjct: 328 VFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVG 386
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 245 FVPDLVTWNAMISGFAQSKRENEA--LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI 302
F + N +S +A S E EA + M G++ N+ T +L +G
Sbjct: 28 FFQKFLEHNTALS-YAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSD 86
Query: 303 GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGK 362
G ++H + +MG +V L+D+Y G L A T+F+ ++ ++ WN ++ +
Sbjct: 87 GWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVA 146
Query: 363 HGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
M + LF RML+E ++ +E T VL C G
Sbjct: 147 GKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGG 182
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 295/557 (52%), Gaps = 52/557 (9%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLC----TNDLNIFSLKSKLVGVYAGCGDVNSARL 68
V C+L C L +G++VH + +D+++ + L+ +Y CGD+ SARL
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVN---ALITMYVKCGDIFSARL 251
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
VFD++P + ++W M S + N E + F +MREF + T + V+ AC L
Sbjct: 252 VFDRMPRRD--RISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEAL 309
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
D + G++VH + GF +VSV N+LI M+S G A VF M +D+VSWT+MI
Sbjct: 310 GDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMI 369
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------------- 217
SGY ++AV + M+ EG+ P++ T
Sbjct: 370 SGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLT 429
Query: 218 ------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
N++I Y++ + A F R+ + ++++W ++I G + R EAL
Sbjct: 430 SYVIVANSLIDMYSKCRCIDKALEVFHRIPNK----NVISWTSIILGLRLNYRSFEALFF 485
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F+ M++S +KPN+VT+ VL A G++ G+EIHA R GL D F +AL+DMY +
Sbjct: 486 FQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVR 544
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
CG ++ A F K+VASWN ++ Y + G ++ELF +M+E + +E+T S+
Sbjct: 545 CGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSL 603
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
L ACS G+V GLE F SM+ ++ + + +HYA VVD+L R+GR+ +AY+ ++++P+
Sbjct: 604 LCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDP 663
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRK 511
++ GA N C I+ +L + FEM + +++L N+ A G+W E +RK
Sbjct: 664 DPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRK 723
Query: 512 IMKEKNVQKQPGFSRVE 528
IM+E + PG S VE
Sbjct: 724 IMRENRLTVDPGCSWVE 740
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 167/566 (29%), Positives = 258/566 (45%), Gaps = 55/566 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C +A +G +VH+ + + L + L+ ++ GD+ A VF K+ +
Sbjct: 100 LLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERD 159
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+F N +V A G F EA+ + M R + +TF VL+ C GL D+ +G++VH
Sbjct: 160 LFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHL 219
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ GFE+DV V NALI MY KCG + SAR VF M RD +SW +MISGY E
Sbjct: 220 HVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLE 279
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP---------- 247
+ LF M+ ++P+ T ++I++ GD + GFV
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQ 339
Query: 248 ---------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
DLV+W AMISG+ ++ +A++ + M G+ P+ +T
Sbjct: 340 MHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEIT 399
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ VL A G + G +H R GL V ++LIDMYSKC + A +F
Sbjct: 400 IASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP 459
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
KNV SW ++I + ++ F++M+ ++ N VTL+SVLSAC+ G + G E
Sbjct: 460 NKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKE 518
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
I + R G+ ++DM R GRM A++ V + G
Sbjct: 519 I-HAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVAS--WNILLTGYAQQ 575
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA-------ADG---------EWHEAENLR 510
G+ LAV + + E + PD S +CA DG ++H A NL+
Sbjct: 576 GKGGLAVELFHKMIESDV-NPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLK 634
Query: 511 KIMKEKNVQKQPGFSRVEKRNEFVEK 536
++ + G R+E EF++K
Sbjct: 635 HYASVVDLLGRAG--RLEDAYEFIKK 658
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 198/409 (48%), Gaps = 45/409 (11%)
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NPN +++ G+ ++A+ + M+E + T+ +L+ C +G +
Sbjct: 61 NPNS-----LILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSR 115
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH+ ++ V +GNAL+ M+ + G L A VF M ERD+ SW ++ GY
Sbjct: 116 VHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGY 175
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
DEA+ L+ RM G+ P+ +T+ NA
Sbjct: 176 FDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNA 235
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+I Y + GD +A F RM D ++WNAMISG+ ++ E L+LF M
Sbjct: 236 LITMYVKCGDIFSARLVFDRMPRR----DRISWNAMISGYFENDVCLEGLRLFFMMREFF 291
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ P+ +T+T V+ A G ++GRE+H V + G +V ++LI M+S G +A
Sbjct: 292 VDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAE 351
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F K++ SW AMI Y K+G+ + ++E + M EG+ +E+T+ SVLSAC+ G
Sbjct: 352 MVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLG 411
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
L++KG+ + +R G+ ++DM + + +A ++ ++P
Sbjct: 412 LLDKGI-MLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP 459
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 295/557 (52%), Gaps = 52/557 (9%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLC----TNDLNIFSLKSKLVGVYAGCGDVNSARL 68
V C+L C L +G++VH + +D+++ + L+ +Y CGD+ SARL
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVN---ALITMYVKCGDIFSARL 251
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
VFD++P + ++W M S + N E + F +MREF + T + V+ AC L
Sbjct: 252 VFDRMPRRD--RISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEAL 309
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
D + G++VH + GF +VSV N+LI M+S G A VF M +D+VSWT+MI
Sbjct: 310 GDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMI 369
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------------- 217
SGY ++AV + M+ EG+ P++ T
Sbjct: 370 SGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLT 429
Query: 218 ------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
N++I Y++ + A F R+ + ++++W ++I G + R EAL
Sbjct: 430 SYVIVANSLIDMYSKCRCIDKALEVFHRIPNK----NVISWTSIILGLRLNYRSFEALFF 485
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F+ M++S +KPN+VT+ VL A G++ G+EIHA R GL D F +AL+DMY +
Sbjct: 486 FQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVR 544
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
CG ++ A F K+VASWN ++ Y + G ++ELF +M+E + +E+T S+
Sbjct: 545 CGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSL 603
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
L ACS G+V GLE F SM+ ++ + + +HYA VVD+L R+GR+ +AY+ ++++P+
Sbjct: 604 LCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDP 663
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRK 511
++ GA N C I+ +L + FEM + +++L N+ A G+W E +RK
Sbjct: 664 DPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRK 723
Query: 512 IMKEKNVQKQPGFSRVE 528
IM+E + PG S VE
Sbjct: 724 IMRENRLTVDPGCSWVE 740
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 167/566 (29%), Positives = 258/566 (45%), Gaps = 55/566 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C +A +G +VH+ + + L + L+ ++ GD+ A VF K+ +
Sbjct: 100 LLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERD 159
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+F N +V A G F EA+ + M R + +TF VL+ C GL D+ +G++VH
Sbjct: 160 LFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHL 219
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ GFE+DV V NALI MY KCG + SAR VF M RD +SW +MISGY E
Sbjct: 220 HVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLE 279
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP---------- 247
+ LF M+ ++P+ T ++I++ GD + GFV
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQ 339
Query: 248 ---------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
DLV+W AMISG+ ++ +A++ + M G+ P+ +T
Sbjct: 340 MHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEIT 399
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ VL A G + G +H R GL V ++LIDMYSKC + A +F
Sbjct: 400 IASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP 459
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
KNV SW ++I + ++ F++M+ ++ N VTL+SVLSAC+ G + G E
Sbjct: 460 NKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKE 518
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
I + R G+ ++DM R GRM A++ V + G
Sbjct: 519 I-HAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVAS--WNILLTGYAQQ 575
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA-------ADG---------EWHEAENLR 510
G+ LAV + + E + PD S +CA DG ++H A NL+
Sbjct: 576 GKGGLAVELFHKMIESDV-NPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLK 634
Query: 511 KIMKEKNVQKQPGFSRVEKRNEFVEK 536
++ + G R+E EF++K
Sbjct: 635 HYASVVDLLGRAG--RLEDAYEFIKK 658
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 198/409 (48%), Gaps = 45/409 (11%)
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NPN +++ G+ ++A+ + M+E + T+ +L+ C +G +
Sbjct: 61 NPNS-----LILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSR 115
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH+ ++ V +GNAL+ M+ + G L A VF M ERD+ SW ++ GY
Sbjct: 116 VHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGY 175
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
DEA+ L+ RM G+ P+ +T+ NA
Sbjct: 176 FDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNA 235
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+I Y + GD +A F RM D ++WNAMISG+ ++ E L+LF M
Sbjct: 236 LITMYVKCGDIFSARLVFDRMPRR----DRISWNAMISGYFENDVCLEGLRLFFMMREFF 291
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ P+ +T+T V+ A G ++GRE+H V + G +V ++LI M+S G +A
Sbjct: 292 VDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAE 351
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F K++ SW AMI Y K+G+ + ++E + M EG+ +E+T+ SVLSAC+ G
Sbjct: 352 MVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLG 411
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
L++KG+ + +R G+ ++DM + + +A ++ ++P
Sbjct: 412 LLDKGI-MLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP 459
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 291/556 (52%), Gaps = 50/556 (8%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLC----TNDLNIFSLKSKLVGVYAGCGDVNSARL 68
V C+L C L +G+++H + +D+++ + L+ +Y CGDVN+ARL
Sbjct: 207 VYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVN---ALITMYVKCGDVNTARL 263
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
VFDK+PN + N M+ G E + F +M ++ + T + V+ AC L D
Sbjct: 264 VFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGD 323
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
+ G+Q+H + F D S+ N+LI MYS GL+ A VF RD+VSWT+MISG
Sbjct: 324 DRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISG 383
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------------- 217
Y N +A+ ++ M+ EG+ P++ T
Sbjct: 384 YENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSY 443
Query: 218 ----NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
N++I YA+ + A F + ++V+W ++I G + R EAL F+
Sbjct: 444 SIVANSLIDMYAKCKCIDKALEIFHSTLEK----NIVSWTSIILGLRINNRCFEALFFFR 499
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
M + +KPN+VT+ VL A G++ G+EIHA R G+ D F +A++DMY +CG
Sbjct: 500 EM-IRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCG 558
Query: 334 SLKDA-RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
++ A + F + V SWN ++ Y + G + ELF+RM+E + NEVT IS+L
Sbjct: 559 RMEYAWKQFFSVDH--EVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISIL 616
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
ACS G+V +GLE F SMK +Y + + +HYACVVD+L RSG++ EAY+ ++++PM
Sbjct: 617 CACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPD 676
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
++ GA N C IH +L E F+ +++LSN+ A +G+W + +RK+
Sbjct: 677 PAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKM 736
Query: 513 MKEKNVQKQPGFSRVE 528
M++ + PG S VE
Sbjct: 737 MRQNGLIVDPGCSWVE 752
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 230/489 (47%), Gaps = 45/489 (9%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAG 59
M+ L P+ + + L+ C +A ++G +V++ + + ++ L + L+ ++
Sbjct: 97 MHELRIPVED---DAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVR 153
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
G++ A VF ++ N+F N +V A G F EA+ + M + + +TF V
Sbjct: 154 FGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCV 213
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
L+ C G+ ++ +G+++H + GFE+DV V NALI MY KCG + +AR VF M RD
Sbjct: 214 LRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDR 273
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT----------------------- 216
+SW +MISGY E + LF M ++P+ T
Sbjct: 274 ISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGY 333
Query: 217 ------------YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
+N++I Y+ G A FSR DLV+W AMISG+
Sbjct: 334 VLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECR----DLVSWTAMISGYENCLM 389
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+AL+ +K M GI P+ +T+ VL A ++ +G +H + + GL ++
Sbjct: 390 PQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANS 449
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
LIDMY+KC + A +F T KN+ SW ++I + ++ F M+ ++ N
Sbjct: 450 LIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPN 508
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
VTL+ VLSAC+ G + G EI + R GV ++DM R GRM A+
Sbjct: 509 SVTLVCVLSACARIGALTCGKEI-HAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQF 567
Query: 445 RQVPMYVTN 453
V VT+
Sbjct: 568 FSVDHEVTS 576
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 177/376 (47%), Gaps = 46/376 (12%)
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
PN +++ L GN A+ Y M E + +++ C K+G
Sbjct: 74 PNSHIYQL-------CLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGS 126
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+V++ + + +GNAL+ M+ + G L A VF M +R++ SW ++ GY
Sbjct: 127 RVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAG 186
Query: 194 KVDEAVVLFERMKLEGLEPNQFTY-----------------------------------N 218
DEA+ L+ RM G++P+ +T+ N
Sbjct: 187 LFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVN 246
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+I Y + GD N A F +M D ++WNAMISG+ ++ E L+LF M+
Sbjct: 247 ALITMYVKCGDVNTARLVFDKMPNR----DRISWNAMISGYFENGVCLEGLRLFGMMIKY 302
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+ P+ +T+T V+ A L G ++GR+IH V R D ++LI MYS G +++A
Sbjct: 303 PVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEA 362
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
T+F T +++ SW AMI Y M ++E ++ M EG+ +E+T+ VLSACS
Sbjct: 363 ETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCL 422
Query: 399 GLVEKGLEIFRSMKER 414
++ G+ + K++
Sbjct: 423 CNLDMGMNLHEVAKQK 438
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/462 (36%), Positives = 258/462 (55%), Gaps = 41/462 (8%)
Query: 69 VFDK-IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
+F+K + NVF N ++ A +G+ EA+ FS MR+ + N+ TF +K+C LL
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D+ G+Q H A GFE D+ V +AL+DMYSKCG L AR +F + R++VSWTSMI+
Sbjct: 91 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 150
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
G Y + D++ A F M
Sbjct: 151 G-----------------------------------YVQNDDAHRALRVFDGMAER---- 171
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREI 306
D+++WN++I+ +AQ+ E++++F M+ G I N VT++ VL A +GS ++G+ I
Sbjct: 172 DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCI 231
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H V +MGL +VF G+++IDMY KCG ++ AR F+ R KNV SW+AM+ YG HG
Sbjct: 232 HDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHA 291
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
++E+F M G++ N +T +SVL+ACSH GL+E+G F++M + V+ EHY C
Sbjct: 292 KEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGC 351
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
+VD+L R+G + EA+DL++ + + + GA C +H DL + FE+ +
Sbjct: 352 MVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKN 411
Query: 487 PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+V+LSNI A G W + E +R +MK + K PGFS V+
Sbjct: 412 CGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVD 453
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 160/339 (47%), Gaps = 53/339 (15%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAG 59
NR FP C + C L G+Q H AL+ + ++F + S LV +Y+
Sbjct: 75 NRSTFP----------CAIKSCSALLDLHSGRQAHQQALIFGFEPDLF-VSSALVDMYSK 123
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNF--------------QEAIGYFSLMR 105
CG++ AR +FD+I + N+ ++W M + + N ++ I + S++
Sbjct: 124 CGELRDARTLFDEISHRNI--VSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIA 181
Query: 106 ------------EFIYRC--------NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
E +R N T S VL AC + GK +H +MG E
Sbjct: 182 VYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLE 241
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
++V VG ++IDMY KCG + AR+ F M E++V SW++M++GY EA+ +F M
Sbjct: 242 SNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEM 301
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFAQSKR 264
+ G++PN T+ +++A+ + G + +F M+ E V P + + M+ ++
Sbjct: 302 NMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGY 361
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
EA L KGM ++P+ V +L A + ++ +G
Sbjct: 362 LKEAFDLIKGM---KLRPDFVVWGALLGACRMHKNVDLG 397
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 14/231 (6%)
Query: 8 INNLSVNY----LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCG 61
+ + +NY L +L C S + R GK +H + L N+F + + ++ +Y CG
Sbjct: 200 VKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVF-VGTSIIDMYCKCG 258
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLK 121
V AR FD++ NV + MV G+ +EA+ F M + N TF VL
Sbjct: 259 KVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLA 318
Query: 122 AC--VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER-D 178
AC GLL+ + A++ + E V ++D+ + G L A + GM R D
Sbjct: 319 ACSHAGLLE-EGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPD 377
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-YARRG 228
V W +++ G C + K + + R KL L+P Y ++++ YA G
Sbjct: 378 FVVWGALL-GACRMHKNVDLGEISAR-KLFELDPKNCGYYVLLSNIYADAG 426
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 275/516 (53%), Gaps = 42/516 (8%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
L+ Y G + +AR VF ++P+ + N M+M + G+ EA+ F+ MR
Sbjct: 181 LLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAAT 240
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
+FTFS VL G+ D+ G+QVH + + N V V N+L+D YSKC L +++FH
Sbjct: 241 RFTFSTVLTVATGVGDLCLGRQVHGLVARATSSN-VFVNNSLLDFYSKCDCLDEMKKLFH 299
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK-------------------------- 206
M ERD VS+ MI+GY + LF M+
Sbjct: 300 EMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGI 359
Query: 207 ---------LEGLEPNQFTYNAIIASYARRGDSNAAFA-FFSRMTAEGFVPDLVTWNAMI 256
L GL NA+I Y++ G +AA F ++ G V+W AMI
Sbjct: 360 GKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTG-----VSWTAMI 414
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+G Q+ ++ EAL+LF GM +G+ P+ T + ++A I +GR++H+ + R G
Sbjct: 415 TGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHM 474
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
VF+GSAL+DMY+KCG L +A F+ +N SWNA+I Y +G ++I++FE M
Sbjct: 475 SSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGM 534
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
L G + + VT +SVLSACSH GL E+ ++ F M+ YG+ KEHY+CV+D L R GR
Sbjct: 535 LCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGR 594
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
+ ++L ++P + + + C HG +DLA E+ F MG +V+LSNI
Sbjct: 595 FDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNI 654
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
A G+W +A ++KIM+++ ++K+ G+S VE +++
Sbjct: 655 FAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHK 690
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 245/543 (45%), Gaps = 53/543 (9%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
L+ LL + S L Q + + + + N FSL L G Y+ G +++A +F P
Sbjct: 37 LNLLLHSLISSGRLAQARALFDQMPHRN-NAFSLNRMLSG-YSRSGQLSAAHHLFLSSPP 94
Query: 76 PNVFMLNWMVMASAFT----GNFQEAIGYF-SLMREFIYRCNKFTFSIVL---KACVGLL 127
+ W VM AF +A+ F ++RE + ++ T + VL A G
Sbjct: 95 HLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAP-DRVTVATVLNLPPASGGTA 153
Query: 128 DIKKGKQVHAVATQMGF-ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
+H A ++G ++V V N L+D Y K GLL +ARRVF M RD V++ +M+
Sbjct: 154 AAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMM 213
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----------------- 229
G EA+ LF M+ +GL +FT++ ++ GD
Sbjct: 214 MGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSS 273
Query: 230 ----SNAAFAFFS---------RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
+N+ F+S ++ E D V++N MI+G+A ++ + L+LF+ M
Sbjct: 274 NVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQ 333
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+ +L G I IG++IHA + +GL + G+ALIDMYSKCG L
Sbjct: 334 SLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLD 393
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
A+T F K SW AMI ++G + +++LF M G+ + T S + A S
Sbjct: 394 AAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASS 453
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT---N 453
+ ++ G ++ S R G S + ++DM + G + EA ++P + N
Sbjct: 454 NLAMIGLGRQL-HSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWN 512
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICAADGEWHEAENLRK 511
++ A+ + +G+ A+ M E G KPD LS + C+ +G E +
Sbjct: 513 AVISAYAH----YGQAKNAIKMFEGMLCYGF-KPDSVTFLSVLSACSHNGLAEECMKYFE 567
Query: 512 IMK 514
+M+
Sbjct: 568 LME 570
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 285/541 (52%), Gaps = 45/541 (8%)
Query: 27 KALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
+ L G+++H + ++F + + L+ +Y+ G V AR +FD +P ++ N M
Sbjct: 186 QTLVDGRKIHCWVFKLGFQWDVF-VAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAM 244
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ GN +A+ MR + T + +L C L DI +H + G
Sbjct: 245 ISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGL 304
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
E ++ V NALI+MY+K G L A++VF MF RDVVSW S+I+ Y A F +
Sbjct: 305 EFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFK 364
Query: 205 MKLEGLEPNQFTY------------------------------------NAIIASYARRG 228
M+L GLEP+ T NA++ YA+ G
Sbjct: 365 MQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLG 424
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM-LVSGIKPNNVTV 287
++A F+ + V D+V+WN +ISG+ Q+ +EA+++++ M IK N T
Sbjct: 425 VIDSAHKVFNLIP----VKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTW 480
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
+L A G++Q G IH + + LH+DVF G+ LID+Y KCG L DA LF
Sbjct: 481 VSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPR 540
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
++ WNA+I C+G HG + +++LF M +EG++ + VT IS+LSACSH GLV++G
Sbjct: 541 ESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWF 600
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
F M+E YG+K S +HY C+VD+L R+G + AYD ++ +P++ S+ GA C IHG
Sbjct: 601 FHLMQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHG 659
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
+L + FE+ +V+LSNI A G+W + +R + +E+ ++K PG+S +
Sbjct: 660 NIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSI 719
Query: 528 E 528
E
Sbjct: 720 E 720
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 161/557 (28%), Positives = 285/557 (51%), Gaps = 61/557 (10%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTN---DLNIFSLKSKLVGVYAGCGDV 63
P N +++ + L C K+ K++HALL + N S++ LV +YA GDV
Sbjct: 71 PAKNEEIDF-NSLFDSCTKTLL---AKRLHALLVVSGKIQSNFISIR--LVNLYASLGDV 124
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKA 122
+ +R FD+I +V+ N M+ A G+F+EAI ++ L+ ++ + +TF VLKA
Sbjct: 125 SLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKA 184
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C L+D G+++H ++GF+ DV V +LI MYS+ G + AR +F M RD+ SW
Sbjct: 185 CQTLVD---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSW 241
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLE---------------------------------- 208
+MISG +A+ + + M+LE
Sbjct: 242 NAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIK 301
Query: 209 -GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
GLE F NA+I YA+ G+ A F +M F+ D+V+WN++I+ + Q+
Sbjct: 302 HGLEFELFVSNALINMYAKFGNLGDAQKVFQQM----FLRDVVSWNSIIAAYEQNDDPVT 357
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID-VFTGSALI 326
A F M ++G++P+ +T+ + + + R +H + R G ++ V G+A++
Sbjct: 358 ARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVM 417
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE--GMRAN 384
DMY+K G + A +F + +K+V SWN +I Y ++G+ +IE++ RM+EE ++ N
Sbjct: 418 DMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVY-RMMEECREIKLN 476
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
+ T +S+L+A +H G +++G+ I + + + + C++D+ + GR+V+A L
Sbjct: 477 QGTWVSILAAYAHVGALQQGMRIHGHLI-KTNLHLDVFVGTCLIDLYGKCGRLVDAMCLF 535
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGE 502
QVP ++ A + IHG + A+ + E + G+ KPD F+ L + C+ G
Sbjct: 536 YQVPRE-SSVPWNAIISCHGIHGHGEKALKLFREMQDEGV-KPDHVTFISLLSACSHSGL 593
Query: 503 WHEAENLRKIMKEKNVQ 519
E + +M+E ++
Sbjct: 594 VDEGKWFFHLMQEYGIK 610
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 277/547 (50%), Gaps = 40/547 (7%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
CLL C +R G Q+H L+ + + ++ + ++ +Y+ CG++ AR +FD +P
Sbjct: 283 CLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQT 342
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ N ++ G EA+ F M + + TF+ L + + +K K+VH
Sbjct: 343 DTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVH 402
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ + G DV + +AL+D+Y K G + A + F DV T+MISGY
Sbjct: 403 SYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNV 462
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
EA+ LF + EG+ PN T +++ +
Sbjct: 463 EALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSIT 522
Query: 224 --YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ G + A+ FF RM V D V WN MI F+Q+ + A+ LF+ M SG K
Sbjct: 523 YMYAKSGRLDLAYQFFRRMP----VKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTK 578
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
++V+++ L A ++ G+E+H V R D F S LIDMYSKCG L AR++
Sbjct: 579 FDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSV 638
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F++ KN SWN++I YG HG ++LF M+E G++ + VT + ++SAC H GLV
Sbjct: 639 FDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLV 698
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
++G+ FR M E YG+ EH+AC+VD+ R+GR+ EA+D ++ +P G+
Sbjct: 699 DEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLG 758
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C +HG +LA + E+ +V+LSN+ A GEW +R +MKEK VQK
Sbjct: 759 ACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKI 818
Query: 522 PGFSRVE 528
PG+S ++
Sbjct: 819 PGYSWID 825
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 237/506 (46%), Gaps = 50/506 (9%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
S L+ +Y G ++ A+ +FD++P + + N M+ G+F A+G F MR +
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N +F +L C ++ G Q+H + + GFE+D +V N +I MYSKCG L AR++
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------- 223
F M + D V+W +I+GY DEAV LF+ M G++ + T+ + + S
Sbjct: 336 FDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSL 395
Query: 224 ----------------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
Y + GD A F + T + D+ AM
Sbjct: 396 KYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNT----LVDVAVCTAM 451
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
ISG+ + EAL LF+ ++ G+ PN +T+ VL A S+++G+E+H + + GL
Sbjct: 452 ISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGL 511
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
GS++ MY+K G L A F +K+ WN MI + ++G + +I+LF +
Sbjct: 512 ENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQ 571
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M G + + V+L + LSAC++ + G E+ R + ++DM + G
Sbjct: 572 MGTSGTKFDSVSLSATLSACANYPALYYGKEL-HCFVVRNSFISDTFVASTLIDMYSKCG 630
Query: 436 RMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GF 490
++ A +D++ NS+ A+ N HGR + + E E G+ +PD F
Sbjct: 631 KLALARSVFDMMDWKNEVSWNSIIAAYGN----HGRPRECLDLFHEMVEAGI-QPDHVTF 685
Query: 491 VMLSNICAADGEWHEAENLRKIMKEK 516
+++ + C G E + M E+
Sbjct: 686 LVIMSACGHAGLVDEGIYYFRCMTEE 711
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 246/489 (50%), Gaps = 43/489 (8%)
Query: 30 RQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
+Q +Q+HA + +N +L S+++G+Y C +F ++ NW++
Sbjct: 93 QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGF 152
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
+ G F A+ +F M +K+TF V+KAC GL ++ K VH +A MGF D+
Sbjct: 153 SMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDL 212
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
+G++LI +Y+ G + A+ +F + RD + W M++GY + A+ F+ M+
Sbjct: 213 FIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNS 272
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF----------------------- 245
++PN ++ +++ A RG A + GF
Sbjct: 273 CVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDA 332
Query: 246 ------VP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+P D VTWN +I+G+ Q+ +EA+ LFK M+ SG+K +++T L + +
Sbjct: 333 RKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKS 392
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
GS++ +E+H+ + R G+ DV+ SAL+D+Y K G ++ A F+ + +VA AMI
Sbjct: 393 GSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMI 452
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
Y +G+ ++ LF +++EGM N +T+ SVL AC+ ++ G E+ + ++ G+
Sbjct: 453 SGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKK-GL 511
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVPM---YVTNSMAGAFRNGCNIHGRRDLAVT 474
+ + + + M +SGR+ AY R++P+ N M +F +G+ +LA+
Sbjct: 512 ENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQ----NGKPELAID 567
Query: 475 MGEEFFEMG 483
+ F +MG
Sbjct: 568 L---FRQMG 573
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 172/498 (34%), Positives = 264/498 (53%), Gaps = 31/498 (6%)
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLK 121
D N R +F +I PN+F+ N M+ F +AI ++ LMR + N FTF VLK
Sbjct: 61 DTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLK 120
Query: 122 ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS 181
AC LLD++ G ++H + + GF+ DV V +L+ +Y+KCG L A +VF + +++VVS
Sbjct: 121 ACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVS 180
Query: 182 WTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT 241
WT++ISGY V K EA+ +F R+ L P+ FT ++++ + GD N+ +
Sbjct: 181 WTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIM 240
Query: 242 AEGFV-------------------------------PDLVTWNAMISGFAQSKRENEALK 270
G V D+V+W AMI G+A + EA+
Sbjct: 241 EMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAID 300
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
LF M +KP+ TV GVL A G++++G + LV R + G+ALID+Y+
Sbjct: 301 LFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYA 360
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
KCGS+ A +F+ + K+ WNA+I +G V S LF ++ + G++ + T I
Sbjct: 361 KCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIG 420
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY 450
+L C+H GLV++G F SM + + S EHY C+VD+L R+G + EA+ L+R +PM
Sbjct: 421 LLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPME 480
Query: 451 VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR 510
+ GA C IH LA ++ E+ +V+LSNI +A+ +W EA +R
Sbjct: 481 ANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVR 540
Query: 511 KIMKEKNVQKQPGFSRVE 528
M EK +QK PG S +E
Sbjct: 541 LSMNEKRIQKPPGCSWIE 558
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 198/399 (49%), Gaps = 22/399 (5%)
Query: 6 FPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDV 63
F NN + ++ L C + L+ G ++H L+ D ++F +K+ LV +YA CG +
Sbjct: 108 FLPNNFTFPFV---LKACARLLDLQLGVKIHTLVVKGGFDCDVF-VKTSLVCLYAKCGYL 163
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLK 121
A VFD IP+ NV ++W + S + G F+EAI F + E + FT VL
Sbjct: 164 EDAHKVFDDIPDKNV--VSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLS 221
Query: 122 ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS 181
AC L D+ G+ +H +MG +V VG +L+DMY+KCG + AR VF GM E+D+VS
Sbjct: 222 ACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVS 281
Query: 182 WTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT 241
W +MI GY EA+ LF +M+ E ++P+ +T ++++ AR G +
Sbjct: 282 WGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVD 341
Query: 242 AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
F+ + V A+I +A+ + A ++FKGM + + V ++ + G ++
Sbjct: 342 RNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMK----EKDRVVWNAIISGLAMNGYVK 397
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE-----ITRIKNVASWNAM 356
I + V ++G+ D T L+ + G + + R F + ++ + M
Sbjct: 398 ISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCM 457
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ G+ G++D + +L M M AN + ++L AC
Sbjct: 458 VDLLGRAGLLDEAHQLIRNM---PMEANAIVWGALLGAC 493
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 186/511 (36%), Positives = 273/511 (53%), Gaps = 53/511 (10%)
Query: 31 QGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDV---NSARLVFDKIPNPNVFMLNWMVM 86
Q KQVHA + N L+ S + +KL+ + DV + LVF ++ PN F+ M+
Sbjct: 57 QIKQVHAHIIRNGLSQCSYVLTKLIRMLTKV-DVPMGSYPLLVFGQVNYPNPFLWTAMIR 115
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG-FE 145
A G E+ +++ MR FTFS + KAC L++ GKQVHA +G F
Sbjct: 116 GYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFA 175
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+D+ VGN++ID+Y KCG L AR+VF M ERDVVSWT +I Y ++ A LF+ +
Sbjct: 176 SDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDL 235
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
+ + A++ YA+ G A +F +M G D VT +IS AQ
Sbjct: 236 P----SKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQ---- 287
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI--DVFTGS 323
G+++ I + R G +V GS
Sbjct: 288 -------------------------------LGAVKHANWIRDIAERSGFGPSGNVVVGS 316
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
ALIDMYSKCGS +A +FE+ + +NV S+++MI Y HG S+++LF ML+ +R
Sbjct: 317 ALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRP 376
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
N+VT I +LSACSH GLVE+G ++F M++ +GV S +HYAC+VD+L R+G + EA DL
Sbjct: 377 NKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDL 436
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG---FVMLSNICAAD 500
++ +PM + GA C IHG D+A E F++ +P+G +++LSNI A+
Sbjct: 437 VKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKL---EPNGIGNYILLSNIYASA 493
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
G W E LRK+++EK +K PG S E +N
Sbjct: 494 GRWEEVSKLRKVIREKGFKKNPGCSWFEGKN 524
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 292/548 (53%), Gaps = 34/548 (6%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C++ C S+ L G++VHA++ D ++F+ + LV +Y+ GD+ A +VF K+P
Sbjct: 207 CVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANA-LVDMYSKLGDIRMAAVVFGKVPE 265
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V N + G+ Q A+ M+ N FT S +LKAC G G+Q+
Sbjct: 266 TDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQI 325
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + ++D + L+DMY+K GLL A++VF + +RD+V W ++ISG + ++
Sbjct: 326 HGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQH 385
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARR---GDSNAAFAFFSRM-------TAEGF 245
EA+ LF RM+ EG + N+ T A++ S A D+ A ++ G
Sbjct: 386 AEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGL 445
Query: 246 VP---------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+ D++ + +MI+ +Q +A+KLF ML G+ P+
Sbjct: 446 IDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDP 505
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
++ +L A + + G+++HA + + DVF G+AL+ Y+KCGS++DA F
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSG 565
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
K V SW+AMIG +HG ++++F RM++E + N +T+ SVL AC+H GLV++
Sbjct: 566 LPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEA 625
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
F SMKE +G++ ++EHYAC++D+L R+G++ +A +L+ +P ++ GA
Sbjct: 626 KRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASR 685
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
+H +L E+ F + K V+L+N A+ G W + +RK+MK+ V+K+P
Sbjct: 686 VHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAM 745
Query: 525 SRVEKRNE 532
S VE +++
Sbjct: 746 SWVELKDK 753
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 160/535 (29%), Positives = 251/535 (46%), Gaps = 67/535 (12%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
S+ + LL + +++L QG +HA L + L ++ L+ Y+ C SAR VFD
Sbjct: 3 SLETIGPLLTRYAATQSLLQGAHIHAHLLKSGL-FAVFRNHLLSFYSKCRLPGSARRVFD 61
Query: 72 KIPNPNVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
+IP+P ++W + +A++ N ++A+G F MR RCN+F +VLK D
Sbjct: 62 EIPDP--CHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAP---DA 116
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF-HGMFERDVVSWTSMISG 188
G Q+HA+A G D+ V NAL+ MY G + AR VF ER+ VSW ++S
Sbjct: 117 GFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSA 176
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQ---------------------------------- 214
Y + AV +F M G++PN+
Sbjct: 177 YVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKD 236
Query: 215 -FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP--DLVTWNAMISGFAQSKRENEALKL 271
FT NA++ Y++ GD A F G VP D+V+WNA ISG + AL+L
Sbjct: 237 VFTANALVDMYSKLGDIRMAAVVF------GKVPETDVVSWNAFISGCVLHGHDQHALEL 290
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
M SG+ PN T++ +L+A +G+ +GR+IH + + D + L+DMY+K
Sbjct: 291 LLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAK 350
Query: 332 CGSLKDARTLFEITRIKNVASWNAMI-GCYGKHGMVDS-SIELFERMLEEGMRANEVTLI 389
G L DA+ +F+ +++ WNA+I GC HG + ++ LF RM +EG N TL
Sbjct: 351 HGLLDDAKKVFDWIPQRDLVLWNALISGC--SHGAQHAEALSLFCRMRKEGFDVNRTTLA 408
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
+VL + + + ++ ++ E+ G ++D + + AY + +
Sbjct: 409 AVLKSTASLEAISDTRQV-HALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGS 467
Query: 450 Y---VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM--LSNICAA 499
Y SM A C+ HG A+ + E GL PD FV+ L N CA+
Sbjct: 468 YDIIAFTSMITALSQ-CD-HGED--AIKLFMEMLRKGL-DPDPFVLSSLLNACAS 517
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 205/418 (49%), Gaps = 37/418 (8%)
Query: 32 GKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G Q+HAL L +IF + + LV +Y G G V+ AR+VFD+ ++W + SA
Sbjct: 119 GTQLHALAMATGLGGDIF-VANALVAMYGGFGFVDEARMVFDE-AGCERNTVSWNGLMSA 176
Query: 90 FTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ N + A+ F M + N+F FS V+ AC G D++ G++VHA+ + G++ D
Sbjct: 177 YVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKD 236
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V NAL+DMYSK G + A VF + E DVVSW + ISG A+ L +MK
Sbjct: 237 VFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKS 296
Query: 208 EGLEPNQFTYNAIIASYARRG-------------------DSNAAFAFFSRMTAEG---- 244
GL PN FT ++I+ + A G D+ AF G
Sbjct: 297 SGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDD 356
Query: 245 ------FVP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
++P DLV WNA+ISG + + EAL LF M G N T+ VL++
Sbjct: 357 AKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTAS 416
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+I R++HAL ++G D + LID Y KC L A +FE ++ ++ +M
Sbjct: 417 LEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSM 476
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
I + + +I+LF ML +G+ + L S+L+AC+ E+G ++ + +R
Sbjct: 477 ITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 14/221 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L LL C A QGKQVHA L ++F+ + LV YA CG + A L F +
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFA-GNALVYTYAKCGSIEDADLAFSGL 566
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKK 131
P V + M+ A G+ + A+ F M + N T + VL AC GL+D K
Sbjct: 567 PEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAK 626
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYC 190
+ +++ G E +ID+ + G L A + + M F+ + W ++++
Sbjct: 627 -RYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAA-- 683
Query: 191 NVSKV--DEAVVLFERMKLEGLEPNQFTYNAIIA-SYARRG 228
S+V D + KL LEP + + ++A +YA G
Sbjct: 684 --SRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAG 722
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 287/552 (51%), Gaps = 40/552 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L C L C L G Q+H+L L ++ + L+ +YA C ++ A +F+ +P
Sbjct: 245 LACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMP 304
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
++ N M+ G F EA G F M+ R + T +L A L +K+GK+
Sbjct: 305 QDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKE 364
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + DV + +AL+D+Y KC + A+ ++ DVV ++MISGY
Sbjct: 365 VHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGM 424
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
+EA+ +F + + ++PN T +A
Sbjct: 425 SEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESA 484
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YA+ G + + F +M+ + D VTWN+MIS F+Q+ + EAL LF+ M + G
Sbjct: 485 LMDMYAKCGRLDLSHYIFLKMSQK----DEVTWNSMISSFSQNGKPQEALDLFRQMCMEG 540
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
IK NN+T++ L A +I G+EIH + + + D+F SALIDMY+KCG+L+ A
Sbjct: 541 IKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELAL 600
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+FE KN SWN++I YG HG+V S+ L M EEG + + VT ++++SAC+H G
Sbjct: 601 RVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAG 660
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVE+G+++F+ M ++Y + EH+AC+VD+ RSG++ +A + +P + GA
Sbjct: 661 LVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGAL 720
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ C +H +LA +E F++ +V++SNI A G W +R++MK+ +
Sbjct: 721 LHACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKIL 780
Query: 520 KQPGFSRVEKRN 531
K PG+S V+ N
Sbjct: 781 KIPGYSWVDVNN 792
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 149/500 (29%), Positives = 235/500 (47%), Gaps = 55/500 (11%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTN----DLNIFSLKSKLVGVYAGCGDVNSAR 67
S + L +L C+ + L G Q+HA + D N +L ++L+G+Y A
Sbjct: 31 SADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAV 90
Query: 68 LVFDKIPNP---NVFMLNWMVMASAFTGNFQEAIGYFSLM--REFIYRCNKFTFSIVLKA 122
VF +P + NW++ G A+ ++ M + T V+K+
Sbjct: 91 AVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKS 150
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C L + G+ VH A +G NDV VG+AL+ MY+ GLL +AR F G+ ERD V W
Sbjct: 151 CAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLW 210
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------- 217
M+ G VD AV LF M+ G EPN T
Sbjct: 211 NVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVK 270
Query: 218 ----------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
N ++A YA+ + A+ F M + DLVTWN MISG Q+ E
Sbjct: 271 CGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQD----DLVTWNGMISGCVQNGLFVE 326
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
A LF M SG +P+++T+ +L A ++ G+E+H + R +++DVF SAL+D
Sbjct: 327 AFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVD 386
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
+Y KC ++ A+ L++ R +V + MI Y +GM + ++++F +LE+ ++ N VT
Sbjct: 387 IYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVT 446
Query: 388 LISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRM-VEAYDLLR 445
+ SVL C+ + G +I ++ Y K E + ++DM + GR+ + Y L+
Sbjct: 447 IASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVE--SALMDMYAKCGRLDLSHYIFLK 504
Query: 446 --QVPMYVTNSMAGAF-RNG 462
Q NSM +F +NG
Sbjct: 505 MSQKDEVTWNSMISSFSQNG 524
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/558 (31%), Positives = 286/558 (51%), Gaps = 48/558 (8%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHAL-----LCTNDLNIFSLKSKLVGVYAGCGDVNSARL 68
N L L+ C L G+Q+HA +ND ++ L+ +YA C D+ +A
Sbjct: 373 NTLASLVVACSSDGTLFSGQQLHAYTTKLGFASND----KIEGALLNLYAKCSDIETALN 428
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
F + NV + N M++A + + + F M+ N++T+ +LK C+ L D
Sbjct: 429 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 488
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
++ G+Q+H+ + F+ + V + LIDMY+K G L +A + +DVVSWT+MI+G
Sbjct: 489 LELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 548
Query: 189 YCNVSKVDEAVVLFERM--------------------KLEGLEPNQFTY----------- 217
Y + D+A+ F +M L+ L+ Q +
Sbjct: 549 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 608
Query: 218 ----NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
NA++ Y++ G+ A+ F + A D + WNA++SGF QS EAL++F
Sbjct: 609 LPFQNALVTLYSKCGNIEEAYLAFEQTEA----GDNIAWNALVSGFQQSGNNEEALRVFA 664
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
M GI NN T ++A T +++ G+++HA++ + G + +A+I MY+KCG
Sbjct: 665 RMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCG 724
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
S+ DA+ F +KN SWNAMI Y KHG +++ F++M+ +R N VTL+ VLS
Sbjct: 725 SISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 784
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
ACSH GLV+KG+E F SM YG+ EHY CVVDML R+G + A D + ++P+
Sbjct: 785 ACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDA 844
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIM 513
+ + C +H ++ E+ +V+LSN+ A +W + R+ M
Sbjct: 845 LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKM 904
Query: 514 KEKNVQKQPGFSRVEKRN 531
KEK V+K+PG S +E +N
Sbjct: 905 KEKGVKKEPGQSWIEVKN 922
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 201/413 (48%), Gaps = 44/413 (10%)
Query: 33 KQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT 91
+Q+HA + L ++ + L+ +Y+ G V+ AR VFD + + +W+ M S +
Sbjct: 190 EQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKD--HSSWVAMISGLS 247
Query: 92 GNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
N EAI F M + FS VL AC + ++ G+Q+H + ++GF +D
Sbjct: 248 KNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 307
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
V NAL+ +Y G L SA +F M +RD V++ ++I+G ++A+ LF+RM+L+G
Sbjct: 308 VCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDG 367
Query: 210 LEPNQFTYNAIIAS-----------------------------------YARRGDSNAAF 234
LEP+ T +++ + YA+ D A
Sbjct: 368 LEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETAL 427
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
+F E V ++V WN M+ + + ++F+ M + I PN T +L+
Sbjct: 428 NYF----LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 483
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
G +++G +IH+ + + ++ + S LIDMY+K G L A + K+V SW
Sbjct: 484 IRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 543
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
MI Y ++ D ++ F +ML+ G+R++EV L + +SAC+ +++G +I
Sbjct: 544 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 596
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 226/473 (47%), Gaps = 55/473 (11%)
Query: 16 LDCLLGKCMKSK-ALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L LL C+K+ +L +G+++H+ +L N L KL+ Y GD++ A VFD++
Sbjct: 70 LKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEM 129
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG---LLDIK 130
P +F N M+ A + F M N+ TFS VL+AC G D+
Sbjct: 130 PERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVV 189
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
+Q+HA G V N LID+YS+ G + ARRVF G++ +D SW +MISG
Sbjct: 190 --EQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLS 247
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
EA+ LF M + G+ P + +
Sbjct: 248 KNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 307
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
NA+++ Y G +A FS M+ D VT+N +I+G +Q +A++LFK M
Sbjct: 308 VCNALVSLYFHLGSLISAEHIFSNMSQR----DAVTYNTLINGLSQCGYGEKAMELFKRM 363
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+ G++P++ T+ ++ A G++ G+++HA ++G + AL+++Y+KC +
Sbjct: 364 QLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDI 423
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ A F T ++NV WN M+ YG + +S +F +M E + N+ T S+L C
Sbjct: 424 ETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 483
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKE--HYAC--VVDMLCRSGRMVEAYDLL 444
G +E G +I + +K S + Y C ++DM + G++ A+D+L
Sbjct: 484 IRLGDLELGEQIHSQI-----IKTSFQLNAYVCSVLIDMYAKLGKLDTAWDIL 531
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 161/337 (47%), Gaps = 45/337 (13%)
Query: 110 RCNKFTFSIVLKACV---GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
R N T +L+ C+ G LD +G+++H+ ++GF+N+ + L+D Y G L
Sbjct: 64 RPNHQTLKWLLEGCLKTNGSLD--EGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------- 217
A +VF M ER + +W MI + S + LF RM E + PN+ T+
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181
Query: 218 ---------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV 250
N +I Y+R G + A F + ++ D
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGL----YLKDHS 237
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
+W AMISG ++++ E EA++LF M V GI P + VL A S++IG ++H LV
Sbjct: 238 SWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 297
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
++G D + +AL+ +Y GSL A +F ++ ++N +I + G + ++
Sbjct: 298 LKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 357
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
ELF+RM +G+ + TL S++ ACS G + G ++
Sbjct: 358 ELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQL 394
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/552 (32%), Positives = 296/552 (53%), Gaps = 47/552 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-----LKSKLVGVYAGCGDVNSARLVFDKI 73
LL +C++S + Q K++ + DL+++ L+++L+ +YA G+++ AR +FDK+
Sbjct: 28 LLLQCVRSNDVVQAKRLQTHM---DLHLYQPTDTFLQNRLLHLYAKSGNLSDARDLFDKM 84
Query: 74 PNPNVFMLNWMVMASAFTGNFQ-------------------------------EAIGYFS 102
+VF N M+ A + +GN + +A+ +F
Sbjct: 85 SRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFV 144
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA--VATQMGFENDVSVGNALIDMYSK 160
M+E + +T VL AC LLDIK+GKQ+H VAT +G V V NAL +MY+K
Sbjct: 145 RMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLG--ESVFVWNALTNMYAK 202
Query: 161 CGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAI 220
CG L AR +F M ++VVSW SMISGY + + LF M+ GL P+Q T + I
Sbjct: 203 CGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNI 262
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
+++Y + G + A F + + D V W M+ G AQ+ +E +AL LF+ ML+ +
Sbjct: 263 LSAYFQCGYIDEACKTFREIKEK----DKVCWTTMMVGCAQNGKEEDALLLFREMLLENV 318
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+P+N T++ V+ + S+ G+ +H G+ D+ SAL+DMYSKCG DA
Sbjct: 319 RPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWI 378
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F+ +NV SWN+MI Y ++G ++ L+E ML E ++ + +T + VLSAC H GL
Sbjct: 379 VFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGL 438
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
VE+G F S+ + +G+ + +HY+C++++L R+G M +A DL++ + +
Sbjct: 439 VERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLL 498
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+ C I+ + FE+ ++MLSNI AA G W + +R +MK ++K
Sbjct: 499 SVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKK 558
Query: 521 QPGFSRVEKRNE 532
+S +E N+
Sbjct: 559 FAAYSWIEIDNQ 570
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 160/337 (47%), Gaps = 45/337 (13%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHA-VATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N +++ +L CV D+ + K++ + + D + N L+ +Y+K G L AR +
Sbjct: 21 NSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDL 80
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M RDV SW +M+S Y V++ +F++M + + +YN +IA ++ G S
Sbjct: 81 FDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVH----DAVSYNTVIAGFSGNGCS 136
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+ A FF RM EGF + + T V
Sbjct: 137 SQALEFFVRMQEEGF-----------------------------------ESTDYTHVSV 161
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A I+ G++IH + L VF +AL +MY+KCG+L AR LF+ KNV
Sbjct: 162 LHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNV 221
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SWN+MI Y ++G ++ +LF M G+ ++VT+ ++LSA G +++ + FR
Sbjct: 222 VSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFRE 281
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
+KE+ V + C ++G+ +A L R++
Sbjct: 282 IKEKDKVCWTTMMVGCA-----QNGKEEDALLLFREM 313
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 173/554 (31%), Positives = 286/554 (51%), Gaps = 44/554 (7%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C++ C S+ L G+QVH + + ++F+ + LV +Y+ GD+ A VF+K+P
Sbjct: 210 CVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANA-LVDMYSKLGDIEMAATVFEKMPA 268
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V N + G+ A+ M+ N FT S VLKAC G G+Q+
Sbjct: 269 ADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQI 328
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + + D V L+DMY+K G L AR+VF M RD++ W ++ISG + +
Sbjct: 329 HGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRH 388
Query: 196 DEAVVLFERMKLEGLE-------------------------------------PNQFTYN 218
E + LF RM+ EGL+ + N
Sbjct: 389 GEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVIN 448
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+I SY + G + A F ++ D+++ M++ +Q +A+KLF ML
Sbjct: 449 GLIDSYWKCGQLDYAIKVFKESRSD----DIISSTTMMTALSQCDHGEDAIKLFVQMLRK 504
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G++P++ ++ +L A + + G+++HA + + DVF G+AL+ Y+KCGS++DA
Sbjct: 505 GLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDA 564
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
F + + SW+AMIG +HG +++LF RML+EG+ N +TL SVLSAC+H
Sbjct: 565 DMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHA 624
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLV+ + F SMKE +G+ ++EHYAC++D+L R+G++ +A +L+ +P ++ GA
Sbjct: 625 GLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGA 684
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
+H +L E+ F + K V+L+N A+ G W E +RK+MK+ NV
Sbjct: 685 LLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNV 744
Query: 519 QKQPGFSRVEKRNE 532
+K+P S VE +++
Sbjct: 745 KKEPAMSWVEIKDK 758
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 256/531 (48%), Gaps = 70/531 (13%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
L + S++L G +H+ L + L + + L+ +Y+ C ++AR VFD+IP+P
Sbjct: 11 LARFGTSRSLFAGAHLHSHLLKSGL-LAGFSNHLLTLYSRCRLPSAARAVFDEIPDP--C 67
Query: 80 MLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
++W + +A++ N ++A+ F MR CN+F +VLK D++ G QVHA
Sbjct: 68 HVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAP---DVRFGAQVHA 124
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF----ERDVVSWTSMISGYCNVS 193
+A +DV V NAL+ +Y G++ ARR+F ER+ VSW +MIS Y
Sbjct: 125 LAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKND 184
Query: 194 KVDEAVVLFERMKLEGLEPNQ-----------------------------------FTYN 218
+ +A+ +F M G PN+ FT N
Sbjct: 185 QSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTAN 244
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A++ Y++ GD A F +M A D+V+WNA ISG ++ AL+L M S
Sbjct: 245 ALVDMYSKLGDIEMAATVFEKMPA----ADVVSWNAFISGCVTHGHDHRALELLLQMKSS 300
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G+ PN T++ VL+A G+ +GR+IH + + D F L+DMY+K G L DA
Sbjct: 301 GLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDA 360
Query: 339 RTLFEITRIKNVASWNAMI-GCY--GKHGMVDSSIELFERMLEEG--MRANEVTLISVLS 393
R +F+ +++ WNA+I GC G+HG V + LF RM +EG + N TL SVL
Sbjct: 361 RKVFDFMPRRDLILWNALISGCSHDGRHGEV---LSLFHRMRKEGLDLDVNRTTLASVLK 417
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM---VEAYDLLRQVPMY 450
+ + + ++ ++ E+ G+ ++D + G++ ++ + R +
Sbjct: 418 STASSEAICHTRQV-HALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDII 476
Query: 451 VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICAA 499
+ +M A C+ HG A+ + + GL +PD FV+ S N C +
Sbjct: 477 SSTTMMTALSQ-CD-HGED--AIKLFVQMLRKGL-EPDSFVLSSLLNACTS 522
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 216/435 (49%), Gaps = 48/435 (11%)
Query: 22 KCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPN--PN 77
KC + +R G QVHAL L ++F + + LV VY G G V+ AR +FD+
Sbjct: 111 KC--APDVRFGAQVHALAVATRLVHDVF-VANALVAVYGGFGMVDEARRMFDEYVGVGGE 167
Query: 78 VFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIY---RCNKFTFSIVLKACVGLLDIKKG 132
++W M SA+ N Q +AIG F RE ++ R N+F FS V+ AC G D++ G
Sbjct: 168 RNAVSWNTMISAYVKNDQSGDAIGVF---REMVWSGERPNEFGFSCVVNACTGSRDLEAG 224
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+QVH + G+E DV NAL+DMYSK G + A VF M DVVSW + ISG
Sbjct: 225 RQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTH 284
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN----------AAFAFFSRMTA 242
A+ L +MK GL PN FT ++++ + A G N A A F A
Sbjct: 285 GHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVA 344
Query: 243 EG-------------------FVP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSG-- 279
G F+P DL+ WNA+ISG + R E L LF M G
Sbjct: 345 VGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLD 404
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ N T+ VL++ + +I R++HAL ++GL D + LID Y KCG L A
Sbjct: 405 LDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAI 464
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ +R ++ S M+ + + +I+LF +ML +G+ + L S+L+AC+
Sbjct: 465 KVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLS 524
Query: 400 LVEKGLEIFRSMKER 414
E+G ++ + +R
Sbjct: 525 AYEQGKQVHAHLIKR 539
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 10/219 (4%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L LL C A QGKQVHA L ++F+ + LV YA CG + A + F +
Sbjct: 513 LSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFA-GNALVYAYAKCGSIEDADMAFSGL 571
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKK 131
P + + M+ A G+ + A+ F M + N T + VL AC GL+D K
Sbjct: 572 PERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAK 631
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYC 190
K ++ G + +ID+ + G L A + + M F+ + W +++ G
Sbjct: 632 -KYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALL-GAS 689
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA-SYARRG 228
V + D + KL LEP + + ++A +YA G
Sbjct: 690 RVHR-DPELGRMAAEKLFTLEPEKSGTHVLLANTYASAG 727
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/473 (35%), Positives = 263/473 (55%), Gaps = 9/473 (1%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
G + A +F I P+ FM N M+ SA + + AI +S M R +KFTF VL
Sbjct: 26 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVL 85
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
KAC L +K G VH ++GFE++ V N LI ++ CG L AR +F G +RDVV
Sbjct: 86 KACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVV 145
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
+W+++ +GY ++ A LF+ M ++ L ++N +I YA+RG+ +A F +
Sbjct: 146 AWSALTAGYARRGELGVARQLFDEMPVKDL----VSWNVMITGYAKRGEMESARKLFDEV 201
Query: 241 TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI 300
D+VTWNAMI+G+ +AL++F+ M G P+ VT+ +L A G +
Sbjct: 202 PKR----DVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDL 257
Query: 301 QIGREIHALVCRMGLH-IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
G+ IH + MG + V G+ALIDMY+KCGS+ A +F+ R K+V++WN+++G
Sbjct: 258 DAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGG 317
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
HG + SI LF M + +R +E+T + VL ACSH G VE+G + F M++ Y ++
Sbjct: 318 LAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEP 377
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEF 479
+ HY C+VD+L R+G + EA+D + + + + C IHG +L +
Sbjct: 378 NIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQL 437
Query: 480 FEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+M + +V+LSNI A+ GEW E +RK+M + V+K+ G S +E N+
Sbjct: 438 LKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGDNK 490
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 134/259 (51%), Gaps = 5/259 (1%)
Query: 57 YAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTF 116
YA G++ SAR +FD++P +V N M+ G+ Q+A+ F MR ++ T
Sbjct: 185 YAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTM 244
Query: 117 SIVLKACVGLLDIKKGKQVHAVATQMGFEN-DVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+L AC L D+ G+++H ++MGF + V +GNALIDMY+KCG + A VF GM
Sbjct: 245 LSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMR 304
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
E+DV +W S++ G ++++ LF M+ + P++ T+ ++ + + G
Sbjct: 305 EKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQ 364
Query: 236 FFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
+F M E P++ + M+ ++ NEA M I+PN + +L A
Sbjct: 365 YFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTM---KIEPNAIVWRTLLGAC 421
Query: 295 GLTGSIQIGREIHALVCRM 313
+ G++++GR + + +M
Sbjct: 422 RIHGNVELGRRANMQLLKM 440
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCT---NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
LL C L G+++H + DL++ L + L+ +YA CG + A VF +
Sbjct: 247 LLSACTDLGDLDAGQRIHCCISEMGFRDLSVL-LGNALIDMYAKCGSIVRALEVFQGMRE 305
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ- 134
+V N ++ AF G+ +++I F+ MR+ R ++ TF VL AC +++G+Q
Sbjct: 306 KDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQY 365
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+ + E ++ ++D+ + GLL A M E + + W +++ G C +
Sbjct: 366 FDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLL-GACRI 423
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 186/558 (33%), Positives = 280/558 (50%), Gaps = 43/558 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L K L Q KQ+HA + ++L++ + KL+ ++ C + A F+++ PNV
Sbjct: 24 LSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNV 83
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
+ N M+ A + +A F M+ + + FTF +LK C G + + + VHA
Sbjct: 84 HLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQ 143
Query: 139 ATQMGFENDVSVGNALIDMYSKC----------------------------------GLL 164
+ GF +DV V N+LID YSKC GL
Sbjct: 144 IEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLY 203
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
AR+VF M E+D +SW +M+ GY V K+D+A LF+ M E N +++ ++ Y
Sbjct: 204 EEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMP----ERNVVSWSTMVLGY 259
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+ GD A F +M V +LV+W ++SGFA+ EA+ LF M + +K +N
Sbjct: 260 CKAGDMEMARMLFDKMP----VKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDN 315
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
TV +L A +G + +G +IHA + +AL+DMY+KCG L A +F
Sbjct: 316 GTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFND 375
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+ K+V SWNAM+ HG ++ELF+RM EEG N+VT+I VL AC+H GL++ G
Sbjct: 376 IKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDG 435
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
+ F +M+ Y + EHY C+VD+L R GR+ EA L+R +PM + G C
Sbjct: 436 IRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACR 495
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
+H +LA + + E+ F MLSNI AA G+W+ N R M+ +K G
Sbjct: 496 MHNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGA 555
Query: 525 SRVEKRNEFVEKEVQNES 542
S +E NE E V + S
Sbjct: 556 SSIEVNNEVHEFTVFDRS 573
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 289/539 (53%), Gaps = 45/539 (8%)
Query: 31 QGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
Q +Q+HA L L FS L +KL+ + GD+ AR VFD +P P VF N ++
Sbjct: 36 QLRQIHARLLVLGLQ-FSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGY 94
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
+ +FQ+A+ +S M+ + FTF +LKAC GL ++ G+ VHA ++GFE DV
Sbjct: 95 SRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADV 154
Query: 149 SVGNALIDMYSKCGLLCSARRVFHG--MFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
V N LI +Y+KC L AR VF G + ER +VSWT+++S Y + EA+ +F +M+
Sbjct: 155 FVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMR 214
Query: 207 LEGLEP---------NQFTY-------NAIIAS-------------------YARRGDSN 231
++P N FT +I AS YA+ G
Sbjct: 215 KMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVA 274
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A F +M + P+L+ WNAMISG+A++ +A+ LF M+ ++P+ +++T +
Sbjct: 275 TAKILFDKMKS----PNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAI 330
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A GS++ R + V R DVF SALIDM++KCGS++ AR++F+ T ++V
Sbjct: 331 SACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVV 390
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
W+AMI YG HG +I L+ M +G+ N+VT + +L AC+H G+V +G F M
Sbjct: 391 VWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRM 450
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
+ + + ++HYAC++D+L R+G + +AY++++ +P+ ++ GA + C H +L
Sbjct: 451 AD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVEL 509
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
++ F + +V LSN+ AA W +R MKEK + K G S VE R
Sbjct: 510 GKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR 568
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 136/264 (51%), Gaps = 5/264 (1%)
Query: 29 LRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L QG+ +HA + L L L +YA CG V +A+++FDK+ +PN+ + N M+
Sbjct: 238 LEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
A G ++AI F M R + + + + AC + +++ + + ++ + +D
Sbjct: 298 YAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDD 357
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V + +ALIDM++KCG + AR VF +RDVV W++MI GY + EA+ L+ M+
Sbjct: 358 VFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMER 417
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
+G+ PN T+ ++ + G + FF+RM P + +I ++ ++
Sbjct: 418 DGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQ 477
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVL 291
A ++ K M V +P VTV G L
Sbjct: 478 AYEVIKCMPV---QP-GVTVWGAL 497
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 288/554 (51%), Gaps = 41/554 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L LL + ++ + +QVH+ + + + + L+ Y + A +F+ IP
Sbjct: 201 LATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIP 260
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ N ++ + G +EAI F M+E YR +FTF+ +L A + L DI+ G+Q
Sbjct: 261 ERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQ 320
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + F +V V NAL+D YSK + A ++F+ M E D +S+ +++ Y +
Sbjct: 321 VHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGR 380
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
V E++ LF+ ++ G + F + N+
Sbjct: 381 VKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNS 440
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YA+ G+ A FS + + VP W AMIS + Q + LKLF M +
Sbjct: 441 LVDMYAKCGEFGEANRIFSDLAIQSSVP----WTAMISSYVQKGLHEDGLKLFVEMQRAK 496
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I + T +++A S+ +G+++H+ + G +VF+GSAL+DMY+KCGS+KDA
Sbjct: 497 IGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDAL 556
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ ++N SWNA+I Y ++G D ++ LFE M+ G++ + V+L+S+L ACSH G
Sbjct: 557 QMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCG 616
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVE+GL+ F SM Y + KEHYA +DMLCR GR EA L+ Q+P M +
Sbjct: 617 LVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSV 676
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMG-LRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
N C IH ++LA + F M LR +V +SNI AA GEW ++K M+E+ V
Sbjct: 677 LNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGV 736
Query: 519 QKQPGFSRVEKRNE 532
+K P +S VE +++
Sbjct: 737 KKVPAYSWVEIKHK 750
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/557 (23%), Positives = 256/557 (45%), Gaps = 73/557 (13%)
Query: 11 LSVNYLDCLLGKCMKS-----KALRQGKQVHALLCTNDLNIFSLKSK-LVGVYAGCGDVN 64
L+++ ++ ++ C ++ A + V A + N + +S LV + GD+N
Sbjct: 59 LTLSLMNNIIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLN 118
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGN------------------------------- 93
AR +FD++P+ N+F N M+M +GN
Sbjct: 119 GARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQ 178
Query: 94 FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNA 153
F+EA G F M + + + +L + + +QVH+ ++G+++ + V N+
Sbjct: 179 FREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNS 238
Query: 154 LIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN 213
L+D Y K L A ++F+ + ERD V++ ++++GY EA+ LF +M+ G P
Sbjct: 239 LLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPT 298
Query: 214 QFTYNAIIASYARRGD----------------------SNAAFAFF---------SRMTA 242
+FT+ AI+ + + D +NA F+ S++
Sbjct: 299 EFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFY 358
Query: 243 EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI 302
E D +++N +++ +A + R E+L+LFK + +G N +L ++ ++ I
Sbjct: 359 EMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDI 418
Query: 303 GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGK 362
GR+IH+ ++ G++L+DMY+KCG +A +F I++ W AMI Y +
Sbjct: 419 GRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQ 478
Query: 363 HGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
G+ + ++LF M + A+ T S++ AC+ + G ++ + G +
Sbjct: 479 KGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGS-GYISNVF 537
Query: 423 HYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA-GAFRNGCNIHGRRDLAVTMGEEFFE 481
+ +VDM + G + +A + +++P V NS++ A + +G D + + EE
Sbjct: 538 SGSALVDMYAKCGSIKDALQMFQEMP--VRNSVSWNALISAYAQNGDGDCTLRLFEEMVR 595
Query: 482 MGLRKPDGFVMLSNICA 498
GL +PD +LS +CA
Sbjct: 596 SGL-QPDSVSLLSILCA 611
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 190/616 (30%), Positives = 302/616 (49%), Gaps = 101/616 (16%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL +C +S++ R +VHA + + + ++++L+ VY CG V+ AR +FD++ N
Sbjct: 25 LLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERN 84
Query: 78 VFMLN-----------------------------WMVMASAFT--GNFQEAIGYFSLMRE 106
+F N W M S F G F EA+ YF+ M
Sbjct: 85 IFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHG 144
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
+ N+++F L AC GL D+K G Q+H++ + + +DV +G+AL+DMYSKCG +
Sbjct: 145 HGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEY 204
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------- 217
A+ VF M R VSW S+I+ Y VDEA+ +F M G+EP++ T
Sbjct: 205 AQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACAT 264
Query: 218 ---------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVP--- 247
NA++ YA+ N A F M V
Sbjct: 265 ISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETS 324
Query: 248 ------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
D++TWNA+I+G Q+ EAL LF+ + + P
Sbjct: 325 MVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPT 384
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI------DVFTGSALIDMYSKCGSLKD 337
+ T +L A +Q+GR+ H+ V + G DVF G++LIDMY KCGS+++
Sbjct: 385 HYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVEN 444
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+F+ K+ SWNAMI Y ++G + ++E+F +MLE G + VT+I VL ACSH
Sbjct: 445 GCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSH 504
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
GL+++G FRSM ++G+ K+HY C+VD+L R+G + EA +L+ ++ M + G
Sbjct: 505 AGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWG 564
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
+ C +H L + ++ E+ +V+LSN+ A + +W +RK+M+++
Sbjct: 565 SLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRG 624
Query: 518 VQKQPGFSRVEKRNEF 533
V KQPG S +E + E
Sbjct: 625 VVKQPGCSWIEIQGEL 640
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 196/406 (48%), Gaps = 49/406 (12%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
FS +L C + +VHA + F ++ + N LID+Y KCG + AR+
Sbjct: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARK------ 75
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
LF+RM LE N F++N+II ++ + G + A
Sbjct: 76 -------------------------LFDRM----LERNIFSWNSIICAFTKSGFLDDAVH 106
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F +M D +WN+MISGF Q R +EAL F M G N + L A
Sbjct: 107 IFEKMPQ----VDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACA 162
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
+++G +IH+LV R DV+ GSAL+DMYSKCG ++ A+++F+ +++ SWN+
Sbjct: 163 GLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNS 222
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
+I CY ++G VD ++++F M++ G+ +EVTL SV+SAC+ +++G +I + +
Sbjct: 223 LITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCD 282
Query: 416 GVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLA 472
+ ++DM + R+ EA +D++ + SM + + R +
Sbjct: 283 EFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYM- 341
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
F M ++ + L C +GE EA L +++K ++V
Sbjct: 342 ------FSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESV 381
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 157/331 (47%), Gaps = 43/331 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C A+++G+Q+HA + C N L + L+ +YA C +N AR++FD +
Sbjct: 255 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 314
Query: 74 PNPNV--------------------FMLNWMVMASAFT-----------GNFQEAIGYFS 102
P +V +M + M++ T G +EA+ F
Sbjct: 315 PIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFR 374
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF------ENDVSVGNALID 156
L++ +TF +L AC L D++ G+Q H+ + GF ++DV VGN+LID
Sbjct: 375 LLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLID 434
Query: 157 MYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT 216
MY KCG + + RVF M E+D VSW +MI GY ++A+ +F +M G P+ T
Sbjct: 435 MYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVT 494
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
++ + + G + +F MTA+ G +P + M+ ++ EA L + M
Sbjct: 495 MIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEM 554
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
++P+ + +L A + +IQ+G +
Sbjct: 555 ---SMQPDAIVWGSLLAACKVHRNIQLGEYV 582
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/568 (32%), Positives = 288/568 (50%), Gaps = 48/568 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
++ C+ +L GK VHA + +IF + + L+ +YA G + + VF+ +
Sbjct: 173 IIQSCIGLDSLELGKMVHAQIVMRGFATHIF-VSTSLLNMYAKLGSIEDSYWVFNMMTEH 231
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N N M+ G EA F M+ N +T V KA L+D+ GK+V
Sbjct: 232 NQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQ 291
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS--WTSMISGYCNVSK 194
A+++G E +V VG ALIDMYSKCG L AR VF F V+ W +MISGY
Sbjct: 292 NCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGC 351
Query: 195 VDEAVVLFERMKLEGLEPNQFTY------------------------------------N 218
EA+ L+ +M G+ + +TY N
Sbjct: 352 SQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNN 411
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
AI +Y++ G F RM D+V+W +++ ++QS EAL F M
Sbjct: 412 AIADAYSKCGFLEDVRKVFDRMEER----DIVSWTTLVTAYSQSSLGEEALATFCLMREE 467
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G PN T + VL + ++ GR++H L+C+ GL + SALIDMY+KCGS+ +A
Sbjct: 468 GFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEA 527
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+F+ ++ SW A+I Y +HG+V+ +++LF RM G++AN VTL+ VL ACSHG
Sbjct: 528 GKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHG 587
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
G+VE+GL F+ M++ YGV EHYAC++D+L R GR+ +A + +R++PM +
Sbjct: 588 GMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQT 647
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
GC +HG +L + + +V+LSN G + + +LR +MK++ V
Sbjct: 648 LLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGV 707
Query: 519 QKQPGFSRVEKR---NEFVEKEVQNESK 543
+K+PG+S + + ++F + Q+ K
Sbjct: 708 KKEPGYSWISVKGRVHKFYSGDQQHPQK 735
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 221/459 (48%), Gaps = 38/459 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN---DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C + ++R+ K VH L+ + D ++ L + VY+ C + +A VFD++P
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
NVF M++ S G F + +F M +KF +S ++++C+GL ++ GK V
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA GF + V +L++MY+K G + + VF+ M E + VSW +MISG +
Sbjct: 190 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 249
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN-------------------AAFAF 236
EA LF RMK PN +T ++ + + D N A
Sbjct: 250 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTAL 309
Query: 237 FSRMTAEGFVPDL--------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+ G + D WNAMISG++QS EAL+L+ M +GI
Sbjct: 310 IDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITS 369
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT-GSALIDMYSKCGSLKDARTL 341
+ T V A + S+Q GR +H +V + GL + V + +A+ D YSKCG L+D R +
Sbjct: 370 DLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKV 429
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ +++ SW ++ Y + + + ++ F M EEG N+ T SVL +C+ +
Sbjct: 430 FDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFL 489
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
E G ++ + + G+ K + ++DM + G + EA
Sbjct: 490 EYGRQV-HGLLCKAGLDTEKCIESALIDMYAKCGSITEA 527
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 286/553 (51%), Gaps = 40/553 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L C L C L G Q+H+L L ++ + L+ +YA C ++ A +F+ +P
Sbjct: 245 LACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLP 304
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
++ N M+ G EA+G F M R + T +L A L +K+GK+
Sbjct: 305 RDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKE 364
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + D + +AL+D+Y KC + +AR ++ DVV +++ISGY
Sbjct: 365 VHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGM 424
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------------- 223
++A+ +F + + ++PN T +++ +
Sbjct: 425 SEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESA 484
Query: 224 ----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
YA+ G + + FS+M+ + D VTWN+MIS F+Q+ EAL LF+ M + G
Sbjct: 485 LMDMYAKCGRLDLSHYIFSKMSLK----DEVTWNSMISSFSQNGEPQEALDLFRQMCMEG 540
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
IK NNVT++ L A +I G+EIH ++ + + D+F SALIDMY+KCG+++ A
Sbjct: 541 IKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELAL 600
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+FE KN SWN++I YG HG+V S+ RM EEG + + VT ++++SAC+H G
Sbjct: 601 RVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAG 660
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVE+GL++F+ M + Y + EH+AC+VD+ RSGR+ +A + +P + GA
Sbjct: 661 LVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGAL 720
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ C +H +LA +E F++ +V++SNI A G W +R++MK+ +
Sbjct: 721 LHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKIL 780
Query: 520 KQPGFSRVEKRNE 532
K PG+S V+ N
Sbjct: 781 KIPGYSWVDVNNS 793
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 150/500 (30%), Positives = 238/500 (47%), Gaps = 55/500 (11%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTN----DLNIFSLKSKLVGVYAGCGDVNSAR 67
S + L LL C+ + L G Q+HA + + N +L ++L+G+Y A
Sbjct: 31 SADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAV 90
Query: 68 LVFDKIPNP---NVFMLNWMVMASAFTGNFQEAIGYFSLM--REFIYRCNKFTFSIVLKA 122
VF +P + NW++ G+ A+ ++ M + T V+K+
Sbjct: 91 AVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKS 150
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C L + G+ VH A G +DV VG+ALI MYS GLL AR F GM RD V W
Sbjct: 151 CAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLW 210
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------- 217
M+ GY V AV LF M++ G EPN T
Sbjct: 211 NVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVK 270
Query: 218 ----------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
N +++ YA+ + A+ F + + DLVTWN MISG Q+ +E
Sbjct: 271 CGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRD----DLVTWNGMISGCVQNGLLDE 326
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
AL LF ML SG +P++VT+ +L A ++ G+E+H + R +H+D F SAL+D
Sbjct: 327 ALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVD 386
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
+Y KC ++ AR L++ R +V + +I Y +GM + ++++F +LE+ ++ N VT
Sbjct: 387 IYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVT 446
Query: 388 LISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
+ SVL AC+ + G EI ++ Y K E + ++DM + GR+ ++ + +
Sbjct: 447 VASVLPACASISALPLGQEIHGYVLRNAYEGKCYVE--SALMDMYAKCGRLDLSHYIFSK 504
Query: 447 VPM---YVTNSMAGAF-RNG 462
+ + NSM +F +NG
Sbjct: 505 MSLKDEVTWNSMISSFSQNG 524
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 181/426 (42%), Gaps = 56/426 (13%)
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGF---ENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+L+ CV + G Q+HA A G N +++ L+ MY A VF +
Sbjct: 38 LLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97
Query: 176 ERDV---VSWTSMISGYCNVSKVDEAVVLFERM--------------------------- 205
+ W +I G+ AV+ + +M
Sbjct: 98 RAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAV 157
Query: 206 ----------KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
+ GL + + +A+I Y+ G A F M D V WN M
Sbjct: 158 SLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWR----DCVLWNVM 213
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ G+ ++ A++LF+ M VSG +PN T+ L + G ++H+L + GL
Sbjct: 214 MDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGL 273
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+V + L+ MY+KC L DA LFE+ ++ +WN MI ++G++D ++ LF
Sbjct: 274 EQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCD 333
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML--CR 433
ML G R + VTL+S+L A + +++G E+ + R V + + +VD+ CR
Sbjct: 334 MLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYII-RNCVHMDAFLVSALVDIYFKCR 392
Query: 434 SGRMVE-AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
R YD R + + + +++ +G ++G + A+ M E + KP+ +
Sbjct: 393 DVRTARNLYDAARAIDVVIGSTVI----SGYVLNGMSEKALQMFRYLLEQCI-KPNAVTV 447
Query: 493 LSNICA 498
S + A
Sbjct: 448 ASVLPA 453
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 273/482 (56%), Gaps = 8/482 (1%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYR 110
L+ YA G + + + FD++P + N + + F+GN QE++ F M+ +
Sbjct: 95 LLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTI--AGFSGNSCPQESLELFKRMQREGFE 152
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
++T +L A LLD++ GKQ+H F +V + NAL DMY+KCG + AR +
Sbjct: 153 PTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWL 212
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F + ++++VSW MISGY + ++ + L +M+L G P+Q T + IIA+Y + G
Sbjct: 213 FDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRV 272
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+ A FS + D+V W AM+ G+A++ RE +AL LF ML+ I+P++ T++ V
Sbjct: 273 DEARRVFSEFKEK----DIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSV 328
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
+ + S+ G+ +H GL+ ++ SALIDMYSKCG + DAR++F + +NV
Sbjct: 329 VSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNV 388
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SWNAMI ++G ++ELFE ML++ + + VT I +LSAC H +E+G E F S
Sbjct: 389 VSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDS 448
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
+ ++G+ + +HYAC+V++L R+GR+ +A L++ + + + C+ G
Sbjct: 449 ISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIV 508
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
A FE+ ++MLSN+ A+ G W + ++R +MK KNV+K GFS +E
Sbjct: 509 NAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEID 568
Query: 531 NE 532
NE
Sbjct: 569 NE 570
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 179/393 (45%), Gaps = 91/393 (23%)
Query: 29 LRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
LR GKQ+H + + N+F + + L +YA CG++ AR +FD + N+ N M+
Sbjct: 171 LRYGKQIHGSIIVRNFLGNVF-IWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMIS 229
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
A G ++ IG MR + ++ T S ++ A
Sbjct: 230 GYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA------------------------ 265
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
Y +CG + ARRVF E+D+V WT+M+ GY + ++A++LF M
Sbjct: 266 -----------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML 314
Query: 207 LEGLEPNQFTYNAIIASYARRGD----------------------SNAAFAFFSRMTAEG 244
LE +EP+ +T +++++S A+ S+A +S+ G
Sbjct: 315 LEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKC---G 371
Query: 245 FVPD------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
F+ D +V+WNAMI G AQ+ + +AL+LF+ ML KP+NVT G+L
Sbjct: 372 FIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILS 431
Query: 293 AGGLTGSIQIGRE-IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A I+ G+E ++ + G+ + + ++++ + G ++ A L IKN+A
Sbjct: 432 ACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVAL-----IKNMA 486
Query: 352 S------WNAMIG-CYGKHGMVDSSI---ELFE 374
W+ ++ C K +V++ + LFE
Sbjct: 487 HDPDFLIWSTLLSICSTKGDIVNAEVAARHLFE 519
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 143/304 (47%), Gaps = 11/304 (3%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
S ++ Y CG V+ AR VF + ++ M++ A G ++A+ F+ M
Sbjct: 260 STIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIE 319
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ +T S V+ +C L + G+ VH + G N++ V +ALIDMYSKCG + AR V
Sbjct: 320 PDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSV 379
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F+ M R+VVSW +MI G +A+ LFE M + +P+ T+ I+++
Sbjct: 380 FNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWI 439
Query: 231 NAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+F ++ + G P L + M++ ++ R +A+ L K M P+ + +
Sbjct: 440 EQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNM---AHDPDFLIWST 496
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI---DMYSKCGSLKDARTLFEITR 346
+L G I + E+ A R +D I +MY+ G KD ++ + +
Sbjct: 497 LLSICSTKGDI-VNAEVAA---RHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMK 552
Query: 347 IKNV 350
KNV
Sbjct: 553 SKNV 556
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 5/176 (2%)
Query: 16 LDCLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C K +L G+ VH ++L + N+ + S L+ +Y+ CG ++ AR VF+ +
Sbjct: 325 LSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLL-VSSALIDMYSKCGFIDDARSVFNLM 383
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P NV N M++ A G+ ++A+ F M + ++ + TF +L AC+ I++G+
Sbjct: 384 PTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQ 443
Query: 134 Q-VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMIS 187
+ +++ Q G + ++++ + G + A + M + D + W++++S
Sbjct: 444 EYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
D F+ +AL+ Y+K GS+++ + F+ ++ S+N I + + S+ELF+RM
Sbjct: 88 DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY---GVKISKEHYACVVDMLCRS 434
EG E T++S+L+A + + G +I S+ R V I + + DM +
Sbjct: 148 REGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFI----WNALTDMYAKC 203
Query: 435 GRMVEA---YDLLRQVPMYVTNSM-AGAFRNG 462
G + +A +D L + + N M +G +NG
Sbjct: 204 GEIEQARWLFDCLTKKNLVSWNLMISGYAKNG 235
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 180/565 (31%), Positives = 305/565 (53%), Gaps = 46/565 (8%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAG--CGDVNSAR 67
L + + D +G C A ++ +Q+HA L T N + S+L+ +Y+ D+ AR
Sbjct: 12 LELGFADQRMGLC----APQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYAR 67
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI--YRCNKFTFSIVLKACVG 125
+FD+I + +++W + + N Q + L E + Y + FT V+K C
Sbjct: 68 SIFDRIQRRS--LIHWNTIIKCYVEN-QFSHDGIVLFHELVHEYLPDNFTLPCVIKGCAR 124
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
L +++GKQ+H +A ++GF +DV V +L++MYSKCG + AR+VF GM ++DVV W S+
Sbjct: 125 LGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSL 184
Query: 186 ISGYCNVSKVDEAVVLFERMK----------LEGLEP-----------------NQFTYN 218
I GY ++D A+ LFE M ++GL N ++N
Sbjct: 185 IDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWN 244
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+I Y + GD ++A F +M + DLVTWN MI+G+ + + +A+K+F ML
Sbjct: 245 AMINGYMKSGDFDSALELFYQMP----IWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKL 300
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G +P++ T+ VL A + GR IH+ + + G +D G++LI+MY+KCG ++ A
Sbjct: 301 GSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESA 360
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
T+F + K V W A+I G HGM + ++ LF M + G++ N + I VL+AC+H
Sbjct: 361 LTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHA 420
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLV+ G + F M Y ++ + EHY C+VD+LCR+G + EA + + +P+ + +
Sbjct: 421 GLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMS 480
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
G HG+ D+ + E+ +++LSN+ AA G W + ++R++M ++
Sbjct: 481 LLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGF 540
Query: 519 QKQPGFSRVEKR---NEFVEKEVQN 540
+K PG S VE + +EF+ ++ +
Sbjct: 541 RKDPGCSSVEHKGTLHEFIVGDISH 565
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 184/568 (32%), Positives = 288/568 (50%), Gaps = 48/568 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
++ C+ +L GK VHA + +IF + + L+ +YA G + + VF+ +
Sbjct: 227 IIQSCIGLDSLELGKMVHAQIVMRGFATHIF-VSTSLLNMYAKLGSIEDSYWVFNMMTEH 285
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N N M+ G EA F M+ N +T V KA L+D+ GK+V
Sbjct: 286 NQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQ 345
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS--WTSMISGYCNVSK 194
A+++G E +V VG ALIDMYSKCG L AR VF F V+ W +MISGY
Sbjct: 346 NCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGC 405
Query: 195 VDEAVVLFERMKLEGLEPNQFTY------------------------------------N 218
EA+ L+ +M G+ + +TY N
Sbjct: 406 SQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNN 465
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
AI +Y++ G F RM D+V+W +++ ++QS EAL F M
Sbjct: 466 AIADAYSKCGFLEDVRKVFDRMEER----DIVSWTTLVTAYSQSSLGEEALATFCLMREE 521
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G PN T + VL + ++ GR++H L+C+ GL + SALIDMY+KCGS+ +A
Sbjct: 522 GFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEA 581
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+F+ ++ SW A+I Y +HG+V+ +++LF RM G++AN VTL+ VL ACSHG
Sbjct: 582 GKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHG 641
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
G+VE+GL F+ M++ YGV EHYAC++D+L R GR+ +A + +R++PM +
Sbjct: 642 GMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQT 701
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
GC +HG +L + + +V+LSN G + + +LR +MK++ V
Sbjct: 702 LLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGV 761
Query: 519 QKQPGFSRVEKR---NEFVEKEVQNESK 543
+K+PG+S + + ++F + Q+ K
Sbjct: 762 KKEPGYSWISVKGRVHKFYSGDQQHPQK 789
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 221/459 (48%), Gaps = 38/459 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN---DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C + ++R+ K VH L+ + D ++ L + VY+ C + +A VFD++P
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
NVF M++ S G F + +F M +KF +S ++++C+GL ++ GK V
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA GF + V +L++MY+K G + + VF+ M E + VSW +MISG +
Sbjct: 244 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 303
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN-------------------AAFAF 236
EA LF RMK PN +T ++ + + D N A
Sbjct: 304 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTAL 363
Query: 237 FSRMTAEGFVPDL--------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+ G + D WNAMISG++QS EAL+L+ M +GI
Sbjct: 364 IDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITS 423
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT-GSALIDMYSKCGSLKDARTL 341
+ T V A + S+Q GR +H +V + GL + V + +A+ D YSKCG L+D R +
Sbjct: 424 DLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKV 483
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ +++ SW ++ Y + + + ++ F M EEG N+ T SVL +C+ +
Sbjct: 484 FDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFL 543
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
E G ++ + + G+ K + ++DM + G + EA
Sbjct: 544 EYGRQV-HGLLCKAGLDTEKCIESALIDMYAKCGSITEA 581
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 184/565 (32%), Positives = 290/565 (51%), Gaps = 65/565 (11%)
Query: 26 SKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
S + Q KQ+ AL+ + SL + + AR VFD+IP+P+ + +
Sbjct: 12 SLPINQLKQIQALII---IKYLSLTPLFIRRLLNASFIQYARQVFDQIPHPDQGVHCSFI 68
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
A + EA+ F M + R FT + K+C LL I GKQVH++ + GF
Sbjct: 69 TAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFH 128
Query: 146 NDVSVGNALIDMY-------------------------------SKCGLLCSARRVFHGM 174
+ V NALI+ Y S+ G + +AR +F M
Sbjct: 129 SSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKM 188
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----- 229
+R +VSW +MIS Y + ++F+RM+ E EPN+ T +++ A+ GD
Sbjct: 189 RDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGL 248
Query: 230 -----------------SNAAFAFFSRMTA--EGFV-------PDLVTWNAMISGFAQSK 263
S A + + A +G + D+VTW+AMI+G+AQ+
Sbjct: 249 RIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNG 308
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
R NEAL+LF+ M + IKPN+VT+ VL A GS++ G I + V GL +V+ S
Sbjct: 309 RSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVAS 368
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
AL+ MYSKCG++ AR +F+ ++ +WN+MI +G + +I L+ RM E ++
Sbjct: 369 ALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKP 428
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
N +T + +++AC+H G VE GLE FRSM+ + + + EH+AC+VD+ CRSGR+++AY+
Sbjct: 429 NNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEF 488
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ ++ + + G + IH +LA G++ E+ +V+LSNI A+ G W
Sbjct: 489 ICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRW 548
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVE 528
EA +RK+MK+K VQK +S VE
Sbjct: 549 QEALKVRKLMKDKRVQKAAAYSWVE 573
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 206/463 (44%), Gaps = 70/463 (15%)
Query: 19 LLGKCMKSKALRQGKQVHALL----------CTNDLNIFSLKSK---------------- 52
+ C A+ GKQVH+L+ C N L F K
Sbjct: 102 IFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKD 161
Query: 53 ------LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE 106
L+ Y+ G+V +AR +FDK+ + ++ N M+ A G++ + F M++
Sbjct: 162 TIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQD 221
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
+ N+ T + VL C L D++ G ++ + +++ V A+++MY KCG +
Sbjct: 222 EMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDD 281
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
R VF M RDVV+W++MI+GY + +EA+ LFE MK ++PN T +++++ A+
Sbjct: 282 GRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQ 341
Query: 227 RGDSNAAFAFFSRMTAEGFVP-------------------------------DLVTWNAM 255
G S + + G + D VTWN+M
Sbjct: 342 LGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSM 401
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE-IHALVCRMG 314
I G A + +A+ L+ M +KPNN+T G++ A G +++G E ++
Sbjct: 402 IMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHN 461
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK---NVASWNAMIGCYGKHGMVDSSIE 371
+ ++ + ++D++ + G L DA I R++ NV W ++ H V+ + E
Sbjct: 462 ISPNIEHFACIVDLFCRSGRLIDAYEF--ICRMEVEPNVVIWGTLLSASRIHLNVELA-E 518
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
L + L E N + + + + G ++ L++ + MK++
Sbjct: 519 LAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDK 561
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 287/552 (51%), Gaps = 40/552 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L C L C L G Q+H L L ++ + LV +YA C + A +F +P
Sbjct: 251 LACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMP 310
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
++ N M+ G +A+ F M++ + + T + +L A L K+GK+
Sbjct: 311 RDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKE 370
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + DV + +AL+D+Y KC + A+ VF DVV ++MISGY
Sbjct: 371 IHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRM 430
Query: 195 VDEAVVLFERMKLEGLEPNQ-----------------------------------FTYNA 219
+ AV +F + G++PN + +A
Sbjct: 431 SEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESA 490
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ Y++ G + + FS+M+A+ D VTWN+MIS FAQ+ EAL LF+ M++ G
Sbjct: 491 LMDMYSKCGRLDLSHYMFSKMSAK----DEVTWNSMISSFAQNGEPEEALDLFRQMIMEG 546
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+K NNVT++ +L A +I G+EIH ++ + + D+F SALIDMY KCG+L+ A
Sbjct: 547 VKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELAL 606
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+FE KN SWN++I YG HG+V S++L M EEG +A+ VT ++++SAC+H G
Sbjct: 607 RVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAG 666
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
V++GL +FR M E Y ++ EH +C+VD+ R+G++ +A + +P + GA
Sbjct: 667 QVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGAL 726
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ C +H +LA +E F++ +V++SNI A G W +R++MK+K VQ
Sbjct: 727 LHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQ 786
Query: 520 KQPGFSRVEKRN 531
K PG+S V+ N
Sbjct: 787 KIPGYSWVDVNN 798
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 216/462 (46%), Gaps = 45/462 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL------NIFSLKSKLVGVYAGCGDVNSARLVFDK 72
LL C+ L G ++HA T+ L +L+++LVG+Y A VF
Sbjct: 42 LLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAVFSS 101
Query: 73 IPNPNV---FMLNWMVMASAFTGNFQEAIGYFSLM--REFIYRCNKFTFSIVLKACVGLL 127
+P NW++ G+ + A+ ++ M R + T V+K+C L
Sbjct: 102 LPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALG 161
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+ G+ VH +G + D+ VG+ALI MY+ GLL AR VF GM ERD V W M+
Sbjct: 162 ALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMD 221
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
GY V AV LF M+ G +PN T ++ A D + + G P
Sbjct: 222 GYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEP 281
Query: 248 -------------------------------DLVTWNAMISGFAQSKRENEALKLFKGML 276
DLVTWN MISG Q+ ++AL+LF M
Sbjct: 282 EVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQ 341
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
SG++P++VT+ +L A + G+EIH + R H+DVF SAL+D+Y KC ++
Sbjct: 342 KSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVR 401
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
A+ +F+ T+ +V + MI Y + M ++++++F +L G++ N V + S L AC+
Sbjct: 402 MAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACA 461
Query: 397 HGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRM 437
+ G E+ +K Y + E + ++DM + GR+
Sbjct: 462 SMAAMRIGQELHGYVLKNAYEGRCYVE--SALMDMYSKCGRL 501
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 16/280 (5%)
Query: 225 ARR-GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV--SGIK 281
ARR D+ A F+ R A +P WN +I GF + A+ + M S +
Sbjct: 89 ARRFRDAVAVFSSLPRAAAAAALP----WNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPR 144
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ T+ V+++ G++ +GR +H +GL D++ GSALI MY+ G L AR +
Sbjct: 145 PDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREV 204
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ ++ WN M+ Y K G V S++ LF M G N TL LS C+ +
Sbjct: 205 FDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADL 264
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGA 458
G+++ ++ +YG++ +V M + + EA+ L +P + N M
Sbjct: 265 LSGVQL-HTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMI-- 321
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+GC +G D A+ + + + GL +PD + S + A
Sbjct: 322 --SGCVQNGLVDDALRLFCDMQKSGL-QPDSVTLASLLPA 358
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 287/552 (51%), Gaps = 40/552 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C S L G Q H+++ L N+F + + LV +YA CG + AR +F+++ +
Sbjct: 434 LLSTCAASHDLEMGSQFHSIIIKKKLAKNLF-VGNALVDMYAKCGALEDARQIFERMCDR 492
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ N ++ + N EA F M + + LKAC + + +GKQVH
Sbjct: 493 DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH 552
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ + G + D+ G++LIDMYSKCG++ AR+VF + E VVS ++I+GY + ++
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLE 611
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD-------- 248
EAVVLF+ M G+ P++ T+ I+ + + F ++T GF +
Sbjct: 612 EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISL 671
Query: 249 -------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+V W M+SG +Q+ EALK +K M G+ P+
Sbjct: 672 LGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPD 731
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF- 342
T VL+ + S++ GR IH+L+ + +D T + LIDMY+KCG +K + +F
Sbjct: 732 QATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFD 791
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E+ R NV SWN++I Y K+G + ++++F+ M + + +E+T + VL+ACSH G V
Sbjct: 792 EMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVS 851
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
G +IF M +YG++ +H AC+VD+L R G + EA D + + + +
Sbjct: 852 DGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGA 911
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IHG E+ E+ + +V+LSNI A+ G W +A LRK+M+++ V+K P
Sbjct: 912 CRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVP 971
Query: 523 GFS--RVEKRNE 532
G+S VE+R
Sbjct: 972 GYSWIDVEQRTH 983
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 219/425 (51%), Gaps = 15/425 (3%)
Query: 28 ALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
ALR GK VH+ L I S L + +V +YA C V+ A FD + +V N M
Sbjct: 75 ALRIGKAVHSKSLI--LGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSM 131
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ + G + + F + E NKFTFSIVL C +++ G+Q+H +MG
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
E + G AL+DMY+KC + ARRVF + + + V WT + SGY +EAV++FER
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M+ EG P+ + +I +Y R G A F M++ PD+V WN MISG +
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGC 307
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
E A++ F M S +K T+ VL A G+ ++ +G +HA ++GL +++ GS+
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+ MYSKC ++ A +FE KN WNAMI Y +G +ELF M G +
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNID 427
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRMVEAYD 442
+ T S+LS C+ +E G + + ++ K++K + +VDM + G + +A
Sbjct: 428 DFTFTSLLSTCAASHDLEMGSQFHSIIIKK---KLAKNLFVGNALVDMYAKCGALEDARQ 484
Query: 443 LLRQV 447
+ ++
Sbjct: 485 IFERM 489
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 220/460 (47%), Gaps = 49/460 (10%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
NI+ + S LV +Y+ C + +A VF+ + N N M+ A G + + F M
Sbjct: 361 NIY-VGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
+ Y + FTF+ +L C D++ G Q H++ + ++ VGNAL+DMY+KCG L
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL----------------- 207
AR++F M +RD V+W ++I Y EA LF+RM L
Sbjct: 480 EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Query: 208 ------------------EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL 249
GL+ + T +++I Y++ G A FS + +
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWS----V 595
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
V+ NA+I+G++Q+ E EA+ LF+ ML G+ P+ +T +++A S+ +G + H
Sbjct: 596 VSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQ 654
Query: 310 VCRMGLHID-VFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVD 367
+ + G + + G +L+ MY + +A LF E++ K++ W M+ + ++G +
Sbjct: 655 ITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYE 714
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+++ ++ M +G+ ++ T ++VL CS + +G I S+ + + +
Sbjct: 715 EALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI-HSLIFHLAHDLDELTSNTL 773
Query: 428 VDMLCRSGRM---VEAYDLLRQVPMYVT-NSMAGAF-RNG 462
+DM + G M + +D +R+ V+ NS+ + +NG
Sbjct: 774 IDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG 813
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 139/273 (50%), Gaps = 15/273 (5%)
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
L ++ GK VH+ + +G +++ +GNA++D+Y+KC + A + F E+DV +W SM+
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSML 132
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
S Y ++ K + + F + + PN+FT++ ++++ AR + M G
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
+ A++ +A+ R ++A ++F+ + + PN V T + +G ++ G
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI----VDPNTVCWTCL-----FSGYVKAGLPE 243
Query: 307 HALVC--RM---GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
A++ RM G D +I+ Y + G LKDAR LF +V +WN MI +G
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHG 303
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
K G +IE F M + +++ TL SVLSA
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 169/548 (30%), Positives = 289/548 (52%), Gaps = 34/548 (6%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C++ C S+ + G+QVHA++ D ++F+ + LV +Y G V+ A ++F+K+P+
Sbjct: 207 CVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANA-LVDMYMKMGRVDIASVIFEKMPD 265
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V N ++ G+ AI M+ N FT S +LKAC G G+Q+
Sbjct: 266 SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQI 325
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + ++D +G L+DMY+K L AR+VF MF RD++ ++ISG + +
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRH 385
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV--------- 246
DEA+ LF ++ EGL N+ T A++ S A ++ + GF+
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 247 ----------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
D++ +MI+ +Q A+KLF ML G++P+
Sbjct: 446 IDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
++ +L A + + G+++HA + + D F G+AL+ Y+KCGS++DA F
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+ V SW+AMIG +HG ++ELF RM++EG+ N +T+ SVL AC+H GLV++
Sbjct: 566 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
F SMKE +G+ ++EHY+C++D+L R+G++ +A +L+ +P S+ GA
Sbjct: 626 KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASR 685
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
+H +L E+ F + K V+L+N A+ G W+E +RK+MK+ N++K+P
Sbjct: 686 VHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAM 745
Query: 525 SRVEKRNE 532
S +E +++
Sbjct: 746 SWIEVKDK 753
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/413 (30%), Positives = 205/413 (49%), Gaps = 48/413 (11%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
L + ++AL G +HA L + ++ S ++ L+ Y+ C AR VFD+IP+P
Sbjct: 11 LTRYAAAQALLPGAHLHASLLKSG-SLASFRNHLISFYSKCRRPCCARRVFDEIPDP--C 67
Query: 80 MLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
++W + +A++ N + AI F MR CN+F +VLK CV D + G QVHA
Sbjct: 68 HVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVP--DARLGAQVHA 124
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH-GMFERDVVSWTSMISGYCNVSKVD 196
+A GF +DV V NAL+ MY G + ARRVF+ ER+ VSW ++S Y +
Sbjct: 125 MAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCG 184
Query: 197 EAVVLFERMKLEGLEPNQ-----------------------------------FTYNAII 221
+A+ +F M G++P + FT NA++
Sbjct: 185 DAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALV 244
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y + G + A F +M D+V+WNA+ISG + ++ A++L M SG+
Sbjct: 245 DMYMKMGRVDIASVIFEKMPDS----DVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN T++ +L+A G+ +GR+IH + + D + G L+DMY+K L DAR +
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV 360
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
F+ +++ NA+I G D ++ LF + +EG+ N TL +VL +
Sbjct: 361 FDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 156/538 (28%), Positives = 251/538 (46%), Gaps = 58/538 (10%)
Query: 22 KCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
KC+ R G QVHA+ ++F + + LV +Y G G ++ AR VF++ +
Sbjct: 111 KCVPDA--RLGAQVHAMAMATGFGSDVF-VANALVAMYGGFGFMDDARRVFNE-ADSERN 166
Query: 80 MLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
++W + SA+ N Q +AI F M + +F FS V+ AC G +I+ G+QVHA
Sbjct: 167 AVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHA 226
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ +MG++ DV NAL+DMY K G + A +F M + DVVSW ++ISG C ++ D
Sbjct: 227 MVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISG-CVLNGHDH 285
Query: 198 -AVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
A+ L +MK GL PN FT ++I+ +
Sbjct: 286 RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 345
Query: 224 --YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ + A F M F DL+ NA+ISG + R +EAL LF + G+
Sbjct: 346 DMYAKNHFLDDARKVFDWM----FHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLG 401
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
N T+ VL++ + R++HAL ++G D + LID Y KC L DA +
Sbjct: 402 VNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRV 461
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
FE ++ + +MI + + +I+LF ML +G+ + L S+L+AC+
Sbjct: 462 FEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAY 521
Query: 402 EKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
E+G ++ + +R + + +A +V + G + +A +P S + A
Sbjct: 522 EQGKQVHAHLIKR---QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWS-AM 577
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD--GEWHEAENLRKIMKE 515
G HG A+ + + G+ P+ M S +CA + G EA+ MKE
Sbjct: 578 IGGLAQHGHGKRALELFGRMVDEGI-NPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 186/390 (47%), Gaps = 49/390 (12%)
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G +HA + G + S N LI YSKC C ARRVF + + VSW+S+++ Y N
Sbjct: 23 GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------NA 219
A+ F M+ EG+ N+F NA
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANA 140
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++A Y G + A F+ +E + V+WN ++S + ++ + +A+++F M+ SG
Sbjct: 141 LVAMYGGFGFMDDARRVFNEADSE---RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I+P + V+ A + +I+ GR++HA+V RMG DVFT +AL+DMY K G + A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+FE +V SWNA+I +G +IEL +M G+ N TL S+L ACS G
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACV--VDMLCRSGRMVEA---YDLLRQVPMYVTNS 454
+ G +I M + + Y V VDM ++ + +A +D + + + N
Sbjct: 318 AFDLGRQIHGFMIK---ANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCN- 373
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
A +GC+ GR D A+++ E + GL
Sbjct: 374 ---ALISGCSHGGRHDEALSLFYELRKEGL 400
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 10/219 (4%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L LL C A QGKQVHA L + F+ + LV YA CG + A L F +
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA-GNALVYTYAKCGSIEDAELAFSSL 566
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKK 131
P V + M+ A G+ + A+ F M + N T + VL AC GL+D K
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYC 190
+ +++ G + + +ID+ + G L A + + M F+ + W +++ G
Sbjct: 627 -RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALL-GAS 684
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA-SYARRG 228
V K D + KL LEP + + ++A +YA G
Sbjct: 685 RVHK-DPELGKLAAEKLFILEPEKSGTHVLLANTYASAG 722
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 295/552 (53%), Gaps = 39/552 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C + + +G Q+H + + D +++ + + L+ Y+ G++ ARLVFD++
Sbjct: 154 LASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVY-VGTSLIDFYSKNGNIEEARLVFDQL 212
Query: 74 PNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+ W + + +T G ++ F+ MRE +++ S VL AC L ++
Sbjct: 213 SEKTA--VTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEG 270
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GKQ+HA + G E DVSV N LID Y+KC + + R++F M ++++SWT+MISGY
Sbjct: 271 GKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQ 330
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR-----GDSNAAFAFFSRMTAEGFV 246
S EA+ LF M G +P+ F +++ S R G A+ + + ++ FV
Sbjct: 331 NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFV 390
Query: 247 PD--------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
+ ++++NAMI G++ ++ +EAL+LF M V
Sbjct: 391 KNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQ 450
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
KPN T ++ A S++ G++ H + +MGL F +AL+DMY+KCGS+++AR
Sbjct: 451 KPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARK 510
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F + ++V WN+MI + +HG + ++ +F M++EG++ N VT ++VLSACSH G
Sbjct: 511 MFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGR 570
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
VE GL F SM +G+K EHYACVV +L RSG++ EA + + ++P+ + +
Sbjct: 571 VEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLL 629
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+ C I G +L E + +++LSNI A+ G W + + +R M V K
Sbjct: 630 SACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVK 689
Query: 521 QPGFSRVEKRNE 532
+PG S +E N+
Sbjct: 690 EPGRSWIEVNNK 701
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 147/517 (28%), Positives = 254/517 (49%), Gaps = 59/517 (11%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYF-SLMR 105
L + L+ V + V++AR+VFDK+P+ N ++ W M S ++ G +EA+ F L R
Sbjct: 86 LANILINVCSKSDRVDNARVVFDKMPHKN--LITWSSMVSMYSQQGYSEEALMVFVDLQR 143
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
+ N+F + V++AC L ++KG Q+H + GF+ DV VG +LID YSK G +
Sbjct: 144 KSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIE 203
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
AR VF + E+ V+WT++I+GY + ++ LF +M+ + P+++ ++++++ +
Sbjct: 204 EARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACS 263
Query: 226 ----------------RRGDS------NAAFAFFS---------RMTAEGFVPDLVTWNA 254
RRG N F++ ++ + V ++++W
Sbjct: 264 MLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTT 323
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MISG+ Q+ + EA+KLF M G KP+ T VL + G +++ GR++HA +
Sbjct: 324 MISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKAN 383
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L D F + LIDMY+K L DA+ +F++ +NV S+NAMI Y + ++ELF
Sbjct: 384 LESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFH 443
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
M + NE T ++++A S+ + G + F + + G+ +VDM +
Sbjct: 444 EMRVRLQKPNEFTFAALITAASNLASLRHGQQ-FHNQLVKMGLDFCPFVTNALVDMYAKC 502
Query: 435 GRMVEAYDLL-----RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD- 488
G + EA + R V + NSM HG + A+ M E + G+ +P+
Sbjct: 503 GSIEEARKMFNSSIWRDVVCW--NSMISTHAQ----HGEAEEALGMFREMMKEGI-QPNY 555
Query: 489 -GFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
FV + + C+ G + N + PGF
Sbjct: 556 VTFVAVLSACSHAGRVEDGLN--------HFNSMPGF 584
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 198/431 (45%), Gaps = 53/431 (12%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
R + F+ +L+ + I K +H G ++D + N LI++ SK + +AR
Sbjct: 46 RPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARV 105
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF-ERMKLEGLEPNQFTYNAIIASYARRG 228
VF M +++++W+SM+S Y +EA+++F + + G PN+F ++I + + G
Sbjct: 106 VFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLG 165
Query: 229 DSNAAFAFFSRMTAEGFVPDL-------------------------------VTWNAMIS 257
+ GF D+ VTW +I+
Sbjct: 166 VVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIA 225
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
G+ + R +L+LF M + + P+ V+ VL A + ++ G++IHA V R G +
Sbjct: 226 GYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM 285
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
DV + LID Y+KC +K R LF+ +KN+ SW MI Y ++ +++LF M
Sbjct: 286 DVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMN 345
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV----VDMLCR 433
G + + SVL++C +E+G ++ Y +K + E V +DM +
Sbjct: 346 RLGWKPDGFACTSVLTSCGSREALEQGRQV-----HAYTIKANLESDEFVKNGLIDMYAK 400
Query: 434 SGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR--KPD 488
S +++A +D++ + + N+M + + + L+ + E F EM +R KP+
Sbjct: 401 SNLLIDAKKVFDVMAEQNVISYNAMIEGYSS------QEKLSEAL-ELFHEMRVRLQKPN 453
Query: 489 GFVMLSNICAA 499
F + I AA
Sbjct: 454 EFTFAALITAA 464
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+ ++P +LQ I + IH + GL D F + LI++ SK +
Sbjct: 42 IPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVD 101
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF-ERMLEEGMRANEVTLISVLSAC 395
+AR +F+ KN+ +W++M+ Y + G + ++ +F + + G NE L SV+ AC
Sbjct: 102 NARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRAC 161
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP--MYVTN 453
+ G+VEKG ++ R G ++D ++G + EA + Q+ VT
Sbjct: 162 TQLGVVEKGAQL-HGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTW 220
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+ A C GR +++ + + E + PD +V+ S + A
Sbjct: 221 TTIIAGYTKC---GRSAVSLELFAQMRETNV-VPDRYVVSSVLSA 261
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 169/548 (30%), Positives = 289/548 (52%), Gaps = 34/548 (6%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C++ C S+ + G+QVHA++ D ++F+ + LV +Y G V+ A ++F+K+P+
Sbjct: 207 CVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANA-LVDMYMKMGRVDIASVIFEKMPD 265
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V N ++ G+ AI M+ N FT S +LKAC G G+Q+
Sbjct: 266 SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQI 325
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + ++D +G L+DMY+K L AR+VF MF RD++ ++ISG + +
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRH 385
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV--------- 246
DEA+ LF ++ EGL N+ T A++ S A ++ + GF+
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 247 ----------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
D++ +MI+ +Q A+KLF ML G++P+
Sbjct: 446 IDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
++ +L A + + G+++HA + + D F G+AL+ Y+KCGS++DA F
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+ V SW+AMIG +HG ++ELF RM++EG+ N +T+ SVL AC+H GLV++
Sbjct: 566 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
F SMKE +G+ ++EHY+C++D+L R+G++ +A +L+ +P S+ GA
Sbjct: 626 KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASR 685
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
+H +L E+ F + K V+L+N A+ G W+E +RK+MK+ N++K+P
Sbjct: 686 VHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAM 745
Query: 525 SRVEKRNE 532
S +E +++
Sbjct: 746 SWIEVKDK 753
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 204/413 (49%), Gaps = 48/413 (11%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
L + ++AL G +HA L + ++ S ++ L+ Y+ C AR FD+IP+P
Sbjct: 11 LTRYAAAQALLPGAHLHASLLKSG-SLASFRNHLISFYSKCRRPCCARRFFDEIPDP--C 67
Query: 80 MLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
++W + +A++ N + AI F MR CN+F +VLK CV D + G QVHA
Sbjct: 68 HVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVP--DARLGAQVHA 124
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH-GMFERDVVSWTSMISGYCNVSKVD 196
+A GF +DV V NAL+ MY G + ARRVF+ ER+ VSW ++S Y +
Sbjct: 125 MAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCG 184
Query: 197 EAVVLFERMKLEGLEPNQ-----------------------------------FTYNAII 221
+A+ +F M G++P + FT NA++
Sbjct: 185 DAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALV 244
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y + G + A F +M D+V+WNA+ISG + ++ A++L M SG+
Sbjct: 245 DMYMKMGRVDIASVIFEKMPDS----DVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN T++ +L+A G+ +GR+IH + + D + G L+DMY+K L DAR +
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV 360
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
F+ +++ NA+I G D ++ LF + +EG+ N TL +VL +
Sbjct: 361 FDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 156/538 (28%), Positives = 251/538 (46%), Gaps = 58/538 (10%)
Query: 22 KCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
KC+ R G QVHA+ ++F + + LV +Y G G ++ AR VF++ +
Sbjct: 111 KCVPDA--RLGAQVHAMAMATGFGSDVF-VANALVAMYGGFGFMDDARRVFNE-ADSERN 166
Query: 80 MLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
++W + SA+ N Q +AI F M + +F FS V+ AC G +I+ G+QVHA
Sbjct: 167 AVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHA 226
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ +MG++ DV NAL+DMY K G + A +F M + DVVSW ++ISG C ++ D
Sbjct: 227 MVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISG-CVLNGHDH 285
Query: 198 -AVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
A+ L +MK GL PN FT ++I+ +
Sbjct: 286 RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 345
Query: 224 --YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ + A F M F DL+ NA+ISG + R +EAL LF + G+
Sbjct: 346 DMYAKNHFLDDARKVFDWM----FHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLG 401
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
N T+ VL++ + R++HAL ++G D + LID Y KC L DA +
Sbjct: 402 VNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRV 461
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
FE ++ + +MI + + +I+LF ML +G+ + L S+L+AC+
Sbjct: 462 FEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAY 521
Query: 402 EKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
E+G ++ + +R + + +A +V + G + +A +P S + A
Sbjct: 522 EQGKQVHAHLIKR---QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWS-AM 577
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD--GEWHEAENLRKIMKE 515
G HG A+ + + G+ P+ M S +CA + G EA+ MKE
Sbjct: 578 IGGLAQHGHGKRALELFGRMVDEGI-NPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 185/390 (47%), Gaps = 49/390 (12%)
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G +HA + G + S N LI YSKC C ARR F + + VSW+S+++ Y N
Sbjct: 23 GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------NA 219
A+ F M+ EG+ N+F NA
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANA 140
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++A Y G + A F+ +E + V+WN ++S + ++ + +A+++F M+ SG
Sbjct: 141 LVAMYGGFGFMDDARRVFNEADSE---RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I+P + V+ A + +I+ GR++HA+V RMG DVFT +AL+DMY K G + A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+FE +V SWNA+I +G +IEL +M G+ N TL S+L ACS G
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACV--VDMLCRSGRMVEA---YDLLRQVPMYVTNS 454
+ G +I M + + Y V VDM ++ + +A +D + + + N
Sbjct: 318 AFDLGRQIHGFMIK---ANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCN- 373
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
A +GC+ GR D A+++ E + GL
Sbjct: 374 ---ALISGCSHGGRHDEALSLFYELRKEGL 400
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 10/219 (4%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L LL C A QGKQVHA L + F+ + LV YA CG + A L F +
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA-GNALVYTYAKCGSIEDAELAFSSL 566
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKK 131
P V + M+ A G+ + A+ F M + N T + VL AC GL+D K
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYC 190
+ +++ G + + +ID+ + G L A + + M F+ + W +++ G
Sbjct: 627 -RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALL-GAS 684
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA-SYARRG 228
V K D + KL LEP + + ++A +YA G
Sbjct: 685 RVHK-DPELGKLAAEKLFILEPEKSGTHVLLANTYASAG 722
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 285/547 (52%), Gaps = 41/547 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+G C SK L+QG+ +HA++ L F L + L+ +YA C D+ AR FD++
Sbjct: 65 IGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKT 124
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLM---REFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ N ++ + G+ + A+ + M + + TFS L AC + DI +G++
Sbjct: 125 LVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGRE 184
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+ A G+ +D V NALI+MYSKCG L SAR+VF + RDV++W +MISGY
Sbjct: 185 IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGA 244
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV---- 250
+A+ LF+RM +PN T+ ++ + D A ++ +G+ DLV
Sbjct: 245 ATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNV 304
Query: 251 ----------------------------TWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
TWN +I + Q + +AL +FK M + + P
Sbjct: 305 LLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAP 364
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N +T++ VL A + G+ + G+ +HAL+ DV ++L++MY++CGSL D +F
Sbjct: 365 NEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVF 424
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
R K++ SW+ +I Y +HG + +E F +L+EG+ A++VT++S LSACSHGG+++
Sbjct: 425 AAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLK 484
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G++ F SM +G+ H+ C+VD+L R+GR+ A +L+ +P + +G
Sbjct: 485 EGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFV-MLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C +H A + ++ FE+ V +LSN+ A G W +++RK + +K
Sbjct: 545 CKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRW---DDVRKTRNRRAARKN 601
Query: 522 PGFSRVE 528
PG S +E
Sbjct: 602 PGCSYIE 608
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 198/385 (51%), Gaps = 36/385 (9%)
Query: 56 VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFT 115
+Y CG V A VF I +PN +V A A G+++EA+GY+ M R +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMG-FENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
F + + C D+K+G+ +HA+ + E D+ +G ALI MY++C L AR+ F M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERM---KLEGLEPNQFTYNAIIASYARRGDSN 231
++ +V+W ++I+GY A+ +++ M EG++P+ T+++ + + GD +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 232 AAFAFFSRMTAEGFVP-------------------------------DLVTWNAMISGFA 260
+R A G+ D++ WN MISG+A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
+ +AL+LF+ M + KPN VT G+L A ++ GR IH V G D+
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300
Query: 321 TGSALIDMYSKC-GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
G+ L++MY+KC SL++AR +FE R ++V +WN +I Y ++G ++++F++M E
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360
Query: 380 GMRANEVTLISVLSACSHGGLVEKG 404
+ NE+TL +VLSAC+ G +G
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQG 385
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 146/296 (49%), Gaps = 43/296 (14%)
Query: 157 MYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT 216
MY KCG + A VFH + + VSWT +++ + EA+ + RM LEGL P+
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 217 Y------------------------------------NAIIASYARRGDSNAAFAFFSRM 240
+ A+I YAR D A F M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 241 TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML---VSGIKPNNVTVTGVLQAGGLT 297
+ LVTWNA+I+G++++ ALK+++ M+ G+KP+ +T + L A +
Sbjct: 121 GKK----TLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVV 176
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
G I GREI A G D +ALI+MYSKCGSL+ AR +F+ + ++V +WN MI
Sbjct: 177 GDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMI 236
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
Y K G ++ELF+RM + N VT I +L+AC++ +E+G I R ++E
Sbjct: 237 SGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVRE 292
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 153/347 (44%), Gaps = 18/347 (5%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN----DLNIFSLKSKLVGVYAGCGD-VNSARLVFDKI 73
LL C + L QG+ +H + + DL I ++ L+ +Y C + AR VF+++
Sbjct: 270 LLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNV---LLNMYTKCSSSLEEARQVFERM 326
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+V N +++A G ++A+ F M+ N+ T S VL AC L ++GK
Sbjct: 327 RTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGK 386
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VHA+ + DV + N+L++MY++CG L VF + ++ +VSW+++I+ Y
Sbjct: 387 AVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHG 446
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD-SNAAFAFFSRMTAEGFVPDLVTW 252
+ F + EGL + T + +++ + G F S + G PD +
Sbjct: 447 HSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHF 506
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
M+ +++ R A L M P+ V T +L L + + +
Sbjct: 507 LCMVDLLSRAGRLEAAENLIHDM---PFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
+ + T + L ++Y++ G D R TR + A N GC
Sbjct: 564 LESEDEHSTVTLLSNVYAEAGRWDDVRK----TRNRRAARKNP--GC 604
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALL----CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
L +L C A RQGK VHAL+ C D+ L++ L+ +Y CG ++ VF
Sbjct: 369 LSNVLSACAVLGAKRQGKAVHALIASGRCKADV---VLENSLMNMYNRCGSLDDTVGVFA 425
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
I + ++ + ++ A A G+ + + +F + + + T L AC +K+
Sbjct: 426 AIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKE 485
Query: 132 GKQVH-AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISG 188
G Q ++ G D ++D+ S+ G L +A + H M F D V+WTS++SG
Sbjct: 486 GVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 168/490 (34%), Positives = 277/490 (56%), Gaps = 9/490 (1%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNF--QEAIGYFS 102
+IFS + L+ YA G + + + FD++P + N + + F+GN QE++ F
Sbjct: 88 DIFSWNA-LLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTI--AGFSGNSCPQESLELFK 144
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M+ + ++T +L A L D++ GKQ+H F +V + NAL DMY+KCG
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
+ AR +F + ++++VSW MISGY + ++ + L +M+L G P+Q T + IIA
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIA 264
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+Y + G + A FS + D+V W AM+ G+A++ RE +AL LF ML+ I+P
Sbjct: 265 AYCQCGRVDEARRVFSEFKEK----DIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEP 320
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
++ T++ V+ + S+ G+ +H GL+ ++ SALIDMYSKCG + DAR++F
Sbjct: 321 DSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVF 380
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ +NV SWNAMI ++G ++ELFE ML++ + + VT I +LSAC H +E
Sbjct: 381 NLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIE 440
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G E F S+ ++G+ + +HYAC+V++L R+GR+ +A L++ + + +
Sbjct: 441 QGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSI 500
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C+ G A FE+ ++MLSN+ A+ G W + ++R +MK KNV+K
Sbjct: 501 CSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFA 560
Query: 523 GFSRVEKRNE 532
GFS +E NE
Sbjct: 561 GFSWIEIDNE 570
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 179/393 (45%), Gaps = 91/393 (23%)
Query: 29 LRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
LR GKQ+H + + N+F + + L +YA CG++ AR +FD + N+ N M+
Sbjct: 171 LRYGKQIHGSIIVRNFLGNVF-IWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMIS 229
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
A G ++ IG MR + ++ T S ++ A
Sbjct: 230 GYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA------------------------ 265
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
Y +CG + ARRVF E+D+V WT+M+ GY + ++A++LF M
Sbjct: 266 -----------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML 314
Query: 207 LEGLEPNQFTYNAIIASYARRGD----------------------SNAAFAFFSRMTAEG 244
LE +EP+ +T +++++S A+ S+A +S+ G
Sbjct: 315 LEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKC---G 371
Query: 245 FVPD------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
F+ D +V+WNAMI G AQ+ + +AL+LF+ ML KP+NVT G+L
Sbjct: 372 FIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILS 431
Query: 293 AGGLTGSIQIGRE-IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A I+ G+E ++ + G+ + + ++++ + G ++ A L IKN+A
Sbjct: 432 ACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVAL-----IKNMA 486
Query: 352 S------WNAMIG-CYGKHGMVDSSI---ELFE 374
W+ ++ C K +V++ + LFE
Sbjct: 487 HDPDFLIWSTLLSICSTKGDIVNAEVAARHLFE 519
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 40/300 (13%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFE-NDVSVGNALIDMYSKCGLLCSARRVFHGM 174
++ ++ CV +I + K++ + F+ D + N L+ +Y+K G L A+ +F M
Sbjct: 25 YTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM 84
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
+RD+ SW +++S Y + F+RM + +YN IA ++ +
Sbjct: 85 LKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFR----DSVSYNTTIAGFSGNSCPQESL 140
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F RM EGF +P T+ +L A
Sbjct: 141 ELFKRMQREGF-----------------------------------EPTEYTIVSILNAS 165
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
++ G++IH + +VF +AL DMY+KCG ++ AR LF+ KN+ SWN
Sbjct: 166 AQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWN 225
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
MI Y K+G + I L +M G ++VT+ ++++A G V++ +F KE+
Sbjct: 226 LMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEK 285
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 183/510 (35%), Positives = 267/510 (52%), Gaps = 17/510 (3%)
Query: 26 SKALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCG-----DVNSARLVFDKIPNPNVF 79
+ +L KQ HAL L T L + LV YA S+ VFD + PNVF
Sbjct: 44 TTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVF 103
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
+ N M+ +AI + M +R NK+T+ VLKAC + +G QVHA
Sbjct: 104 LWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHL 163
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF-ERDVVSWTSMISGYCNVSKVDEA 198
+ G D + ++ I MY+ G L ARR+ E D V W +MI GY +V+ A
Sbjct: 164 VKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAA 223
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
LFE M + T+NA+I+ ++R G A FF M D ++W+AMI G
Sbjct: 224 RELFEGMPDRSMIS---TWNAMISGFSRCGMVEVAREFFDEMKER----DEISWSAMIDG 276
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
+ Q EAL++F M I+P + VL A G++ GR IH R + +D
Sbjct: 277 YIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLD 336
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
G++L+DMY+KCG + A +FE K V+SWNAMIG HG + +I+LF +M
Sbjct: 337 GVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM-- 394
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
+ NE+T + VL+AC+HGGLV+KGL IF SM++ YGV+ EHY C+VD+L R+G +
Sbjct: 395 -DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLT 453
Query: 439 EAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
EA ++ +P T ++ GA C HG +L +G+ E+ + + +LSNI A
Sbjct: 454 EAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYA 513
Query: 499 ADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
G W E +RK+MKE+ ++ PG S ++
Sbjct: 514 KAGRWEEVGEVRKLMKERGIKTTPGTSIID 543
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 13/219 (5%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C AL QG+ +H N + + L + LV +YA CG ++ A VF+K+
Sbjct: 305 LPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS 364
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N V N M+ A G ++AI FS M N+ TF VL AC ++KG
Sbjct: 365 NKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLT 421
Query: 135 V-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+ +++ + G E + ++D+ + GLL A +V + E W +++ G C
Sbjct: 422 IFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALL-GAC-- 478
Query: 193 SKVDEAVVLFERMK--LEGLEP-NQFTYNAIIASYARRG 228
+ V L ER+ L LEP N Y + YA+ G
Sbjct: 479 -RKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAG 516
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 292/581 (50%), Gaps = 65/581 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C K+ GK+VH+++ +N + + +L KLV YA CGD+ R VFD + N
Sbjct: 105 VLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKN 164
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMRE--------------FIYRCNKFTFSI----- 118
V++ N+MV A G+F+E+I F +M E F C++ S
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMIS 224
Query: 119 --------------------------------VLKACVGLLDIKKGKQVHAVATQMGFEN 146
VL C + GK VH++A + FE
Sbjct: 225 GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
++ N L+DMYSKCG L A RVF M ER+VVSWTSMI+GY + D A+ L ++M+
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQME 344
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
EG++ + +I+ + AR G + + A +L NA++ +A+
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSME 404
Query: 267 EALKLFKGMLVSGI----------KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
A +F M+V I KP++ T+ VL A +++ G+EIH + R G
Sbjct: 405 AANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYS 464
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
D +AL+D+Y KCG L AR LF++ K++ SW MI YG HG + +I F M
Sbjct: 465 SDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEM 524
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
+ G+ +EV+ IS+L ACSH GL+E+G F MK + ++ EHYAC+VD+L R+G
Sbjct: 525 RDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGN 584
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
+ +AY+ + +P+ ++ GA GC + +LA + E FE+ +V+L+NI
Sbjct: 585 LSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANI 644
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFV 534
A +W E + LR+ + ++ ++K PG S +E K N FV
Sbjct: 645 YAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFV 685
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 198/405 (48%), Gaps = 46/405 (11%)
Query: 48 SLKSKLVG-VYAGCGDV----NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS 102
SLK+K+ +++ C + R + ++ + N +L++ + G+ + A+
Sbjct: 36 SLKTKIFSPIFSSCIPIRISATPTRTIDHQVTDYNAKILHFCQL-----GDLENAM---- 86
Query: 103 LMREFIYRCNKF-----TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDM 157
E I C K T+ VL+ C GL GK+VH++ D ++G L+
Sbjct: 87 ---ELICMCQKSELETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSF 143
Query: 158 YSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
Y+ CG L RRVF M +++V W M+S Y + E++ LF+ M +G+E
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE------ 197
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
+R +S AF F ++ D+++WN+MISG+ + L ++K M+
Sbjct: 198 -------GKRPES--AFELFDKLCDR----DVISWNSMISGYVSNGLTERGLGIYKQMMY 244
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
GI + T+ VL +G++ +G+ +H+L + + + L+DMYSKCG L
Sbjct: 245 LGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDG 304
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A +FE +NV SW +MI Y + G D +I+L ++M +EG++ + V + S+L AC+
Sbjct: 305 ALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACAR 364
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYAC--VVDMLCRSGRMVEA 440
G ++ G ++ +K + + C ++DM + G M A
Sbjct: 365 SGSLDNGKDVHDYIKAN---NMESNLFVCNALMDMYAKCGSMEAA 406
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C AL +GK++H + N + + + LV +Y CG + ARL+FD IP+
Sbjct: 437 CVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 496
Query: 77 NVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKG 132
+ +++W VM + + G EAI F+ MR+ ++ +F +L AC GLL+ +
Sbjct: 497 D--LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLE-QGW 553
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
+ + + E + ++D+ S+ G L A + D W +++ G N
Sbjct: 554 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRN 613
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
++ A + ER + LEP Y ++A+
Sbjct: 614 YHDIELAEKVAER--VFELEPENTGYYVLLAN 643
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 280/513 (54%), Gaps = 43/513 (8%)
Query: 25 KSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
+S+ + Q +HA L N + F + +L+ + C ++ A +F NPNV++
Sbjct: 58 RSRHINQVLPIHAQLIRNGHSQDPF-MVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYT 116
Query: 83 WMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
++ +GN+ EAI +S M + + + +LKAC L +++G++VH+ A ++
Sbjct: 117 ALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKL 176
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
GF ++ V ++++Y KCG L ARRVF M E DVV+ T MIS Y + V+E
Sbjct: 177 GFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVEE----- 230
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
A A FSR+ + D V W AMI GF ++
Sbjct: 231 ------------------------------AGAVFSRVRRK----DTVCWTAMIDGFVRN 256
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
+ N AL+ F+GM ++PN T+ VL A G+++IGR +H+ + + + +++F G
Sbjct: 257 EETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVG 316
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+ALI+MYS+CGS+ +A+T+F+ + ++V ++N MI +G +IELF M+ +R
Sbjct: 317 NALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLR 376
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
VT + VL+ACSHGGLV+ G EIF SM Y V+ EHY C+VD+L R GR+ EAYD
Sbjct: 377 PTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYD 436
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
L+R + M + M G + C +H +L + +E + G +V+LS++ A+ G+
Sbjct: 437 LIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGK 496
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
W EA +R MKE +QK+PG S +E NE E
Sbjct: 497 WKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHE 529
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 18 CLLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C+L C + AL G+ VH+ + +LN+F + + L+ +Y+ CG ++ A+ VFD++ +
Sbjct: 283 CVLSACSQLGALEIGRWVHSYMRKFEIELNLF-VGNALINMYSRCGSIDEAQTVFDEMKD 341
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV--GLLDIKKGK 133
+V N M+ + G ++AI F +M R TF VL AC GL+D G
Sbjct: 342 RDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDF--GF 399
Query: 134 QV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
++ H++A E + ++D+ + G L A + M
Sbjct: 400 EIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM 441
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 188/593 (31%), Positives = 297/593 (50%), Gaps = 80/593 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L KC K LR G QVHA L N +++ L S+L+ VY G V AR +FDK+ N
Sbjct: 16 ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 75
Query: 78 VFMLNWMVMASAFTG--NFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
VF +W + + G +++E I F LM R + F F V KAC L + + GK V
Sbjct: 76 VF--SWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 133
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
+ +GFE + V +++DM+ KCG + ARR F + +DV W M+SGY + +
Sbjct: 134 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 193
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIA-----SYARRG-------------DS-----NA 232
+A+ +F +M LEG++PN T + ++ S R G DS N+
Sbjct: 194 KKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 253
Query: 233 AFAFFSRMTAE-------GFV--PDLVTWNAM---------------------------- 255
++++ + G + DLV+WNAM
Sbjct: 254 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSV 313
Query: 256 ---------------ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI 300
IS AQS R AL L + M +S ++ N VT+ L A ++
Sbjct: 314 FSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAAL 373
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY 360
+ G+EIH + R GL F ++LIDMY +CGS++ +R +F++ +++ SWN MI Y
Sbjct: 374 RQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVY 433
Query: 361 GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKIS 420
G HG ++ LF++ G++ N +T ++LSACSH GL+E+G + F+ MK Y + +
Sbjct: 434 GMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPA 493
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF 480
E YAC+VD+L R+G+ E + + ++P ++ G+ C IH DLA F
Sbjct: 494 VEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLF 553
Query: 481 EMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
E+ + +V+++NI +A G W +A +R +MKE+ V K PG S +E + +
Sbjct: 554 ELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKL 606
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 215/479 (44%), Gaps = 86/479 (17%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
++ +L+ C L +++ G QVHA G + +G+ L+++Y + G + ARR+F M
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
ER+V SWT+++ YC + +E + LF M EG+ P+ F + + + + +
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132
Query: 236 FFSRMTAEGF-------------------------------VPDLVTWNAMISGFAQSKR 264
+ M + GF D+ WN M+SG+
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM-GLHIDVFTGS 323
+AL +F+ M++ G+KPN++T+ + A ++ GREIH ++ L D+ G+
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 252
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG--KHGMVDSSIELFERM----- 376
+L+D Y+KC S++ AR F + + ++ SWNAM+ G ++G +++E F+RM
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312
Query: 377 --------------------------------LEE----GMRANEVTLISVLSACSHGGL 400
L E + N VT++S L ACS
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAG 457
+ +G EI + + R G+ ++DM R G + ++ +DL+ Q + N M
Sbjct: 373 LRQGKEIHQFII-RCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMIS 431
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMK 514
+ +HG AV + ++F MGL KP+ F L + C+ G E K+MK
Sbjct: 432 VY----GMHGFGMDAVNLFQQFRTMGL-KPNHITFTNLLSACSHSGLIEEGWKYFKMMK 485
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 190/554 (34%), Positives = 282/554 (50%), Gaps = 46/554 (8%)
Query: 22 KCMKSKA-LRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
KC + A + +G+QVH L+C N + ++ + L+ Y V A+ +FD++ + +V
Sbjct: 259 KCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVI 318
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
N M+ G I F M F + T V AC + + GK +H+ +
Sbjct: 319 SWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYS 378
Query: 140 TQMG-FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ + +V N L+DMYSKCG L SA RVF M E+ VVSWTSMI+GY D A
Sbjct: 379 IKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGA 438
Query: 199 VVLFERMKLEG-----------------------------------LEPNQFTYNAIIAS 223
+ LF+ MK G LE N F NA+
Sbjct: 439 IKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDM 498
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
YA+ G A FS M + D+++WN MI G+ ++ NEAL LF M KP+
Sbjct: 499 YAKCGSMKDAHDVFSHMKKK----DVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPD 553
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
TV +L A ++ GREIH R G D + +A++DMY KCG L AR+LF+
Sbjct: 554 GTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFD 613
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ K++ SW MI YG HG +I F +M G+ +EV+ IS+L ACSH GL+++
Sbjct: 614 MIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDE 673
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
G +IF MK+ ++ + EHYAC+VD+L R+G +V+A+ ++ +P+ ++ GA GC
Sbjct: 674 GWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGC 733
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
IH LA + E FE+ +V+L+NI A +W E + LRK + ++ ++K PG
Sbjct: 734 RIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPG 793
Query: 524 FSRVE---KRNEFV 534
S +E K N FV
Sbjct: 794 CSWIEIKGKINIFV 807
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 160/545 (29%), Positives = 267/545 (48%), Gaps = 48/545 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + K++R G++V +++ ++ + I L KLV +Y CGD+ R+VFDK+
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+F+ N M+ + +GN+ E+I F M E + N +TFS +LK + +++G+QVH
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ ++GF + +V N+LI Y + A+++F + +RDV+SW SMISGY D
Sbjct: 276 LICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDR 335
Query: 198 AVVLFERMKLEGLEPNQFTY------------------------------------NAII 221
+ +F +M + G++ + T N ++
Sbjct: 336 GIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLL 395
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y++ GD N+A F RM + +V+W +MI+G+ + + A+KLF M G+
Sbjct: 396 DMYSKCGDLNSAIRVFERMDEK----TVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVV 451
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ VT +L A + G+++ G+ +H + L + F +AL DMY+KCGS+KDA +
Sbjct: 452 PDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDV 511
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F + K+V SWN MIG Y K+ + + ++ LF M E + + T+ +L AC+ +
Sbjct: 512 FSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAAL 570
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
+KG EI R G K VVDM + G +V A L +P S
Sbjct: 571 DKGREI-HGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWT-VMIA 628
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
G +HG A+ + G+ +PD F+ + C+ G E + IMK K Q
Sbjct: 629 GYGMHGYGSEAINTFNQMRMTGI-EPDEVSFISILYACSHSGLLDEGWKIFNIMK-KECQ 686
Query: 520 KQPGF 524
+P
Sbjct: 687 IEPNL 691
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 147/281 (52%), Gaps = 13/281 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK-LVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + L+ GK VH + N+L S S L +YA CG + A VF + +
Sbjct: 460 ILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKD 519
Query: 78 VFMLNWMVMASAFTGNF--QEAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
V ++W M +T N EA+ F+ M RE + + T + +L AC L + KG++
Sbjct: 520 V--ISWNTMIGGYTKNSLPNEALTLFAEMQRE--SKPDGTTVACILPACASLAALDKGRE 575
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H A + G+ D V NA++DMY KCGLL AR +F + +D+VSWT MI+GY
Sbjct: 576 IHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGY 635
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWN 253
EA+ F +M++ G+EP++ ++ +I+ + + G + + F+ M E + P+L +
Sbjct: 636 GSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYA 695
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
M+ A++ +A K K M IKP + T+ G L G
Sbjct: 696 CMVDLLARTGNLVKAHKFIKAM---PIKP-DATIWGALLCG 732
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 175/546 (32%), Positives = 293/546 (53%), Gaps = 43/546 (7%)
Query: 29 LRQGKQVHALLCTNDL--NIFSLKSKLVGVYA--GCGDVNSARLVFDKIPNPNVFMLNWM 84
+ Q KQ+HA + L + F+ SK+V + G + ARLVF +IPNP + N +
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPFT-ASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSI 59
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ QEA+ ++ M +++TF + K+C + +GKQ+H +T++GF
Sbjct: 60 IRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQIHCHSTKLGF 116
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+D N L++MYS CG L SAR+VF M ++ VVSW +MI + + +EAV LF+R
Sbjct: 117 ASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDR 176
Query: 205 -MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF------------------ 245
MK E ++PN+ T ++ + AR D + GF
Sbjct: 177 MMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCG 236
Query: 246 -------------VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
+L +WN MI+G + EAL LF+ M GIK + VT+ +L
Sbjct: 237 CVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLL 296
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A G++++G+ +HA + + + +DV G+AL+DMY+KCGS++ A +F K+V +
Sbjct: 297 ACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMT 356
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
W A+I G +++++ F+ M +G++ + +T + VL+ACSH G V++G+ F SM
Sbjct: 357 WTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMS 416
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLA 472
+ YG++ + EHY +VD+L R+GR+ EA +L++ +PM + G C IHG + A
Sbjct: 417 DTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAA 476
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR-- 530
++ E+ +V+LSNI + +W EA+ R++M E+ ++K PG S++E
Sbjct: 477 ERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGV 536
Query: 531 -NEFVE 535
+EFV+
Sbjct: 537 VHEFVK 542
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 156/288 (54%), Gaps = 11/288 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIP 74
+L C +++ L K++H + D + F L + L+ VY CG V AR +FDK
Sbjct: 193 VLTACARARDLAMVKRIHEYI---DEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQ 249
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N+F N M+ N++EA+ F M+ + +K T + +L AC L ++ GK
Sbjct: 250 EKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKW 309
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+HA + + DV++G AL+DMY+KCG + +A +VFH M E+DV++WT++I G +
Sbjct: 310 LHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQ 369
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT-AEGFVPDLVTWN 253
+ A+ F+ M ++G++P+ T+ ++A+ + G + + F+ M+ G P + +
Sbjct: 370 AENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYG 429
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
++ ++ R EA +L K M ++ P+ + G+L A + G+++
Sbjct: 430 GLVDILGRAGRIAEAEELIKSMPMA---PDQFVLGGLLGACRIHGNLE 474
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 292/581 (50%), Gaps = 65/581 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C K+ GK+VH+++ +N + + +L KLV YA CGD+ R VFD + N
Sbjct: 105 VLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKN 164
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMRE--------------FIYRCNKFTFSI----- 118
V++ N+MV A G+F+E+I F +M E F C++ S
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMIS 224
Query: 119 --------------------------------VLKACVGLLDIKKGKQVHAVATQMGFEN 146
VL C + GK VH++A + FE
Sbjct: 225 GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
++ N L+DMYSKCG L A RVF M ER+VVSWTSMI+GY + D A+ L ++M+
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQME 344
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
EG++ + +I+ + AR G + + A +L NA++ +A+
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSME 404
Query: 267 EALKLFKGMLVSGI----------KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
A +F M+V I KP++ T+ VL A +++ G+EIH + R G
Sbjct: 405 AANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYS 464
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
D +AL+D+Y KCG L AR LF++ K++ SW MI YG HG + +I F M
Sbjct: 465 SDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEM 524
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
+ G+ +EV+ IS+L ACSH GL+E+G F MK + ++ EHYAC+VD+L R+G
Sbjct: 525 RDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGN 584
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
+ +AY+ + +P+ ++ GA GC + +LA + E FE+ +V+L+NI
Sbjct: 585 LSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANI 644
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFV 534
A +W E + LR+ + ++ ++K PG S +E K N FV
Sbjct: 645 YAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFV 685
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 199/405 (49%), Gaps = 46/405 (11%)
Query: 48 SLKSKLVG-VYAGCGDV----NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS 102
SLK+K+ +++ C + R + ++ + N +L++ + G+ + A+
Sbjct: 36 SLKTKIFSPIFSSCIPIRISATPTRTIDHQVTDYNAKILHFCQL-----GDLENAM---- 86
Query: 103 LMREFIYRCNKF-----TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDM 157
E I C K T+S VL+ C GL GK+VH++ D ++G L+
Sbjct: 87 ---ELICMCKKSELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSF 143
Query: 158 YSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
Y+ CG L RRVF M +++V W M+S Y + E++ LF+ M +G+E
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE------ 197
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
+R +S AF F ++ D+++WN+MISG+ + L ++K M+
Sbjct: 198 -------GKRPES--AFELFDKLCDR----DVISWNSMISGYVSNGLTERGLGIYKQMMY 244
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
GI + T+ VL +G++ +G+ +H+L + + + L+DMYSKCG L
Sbjct: 245 LGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDG 304
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A +FE +NV SW +MI Y + G D +I+L ++M +EG++ + V + S+L AC+
Sbjct: 305 ALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACAR 364
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYAC--VVDMLCRSGRMVEA 440
G ++ G ++ +K + + C ++DM + G M A
Sbjct: 365 SGSLDNGKDVHDYIKAN---NMESNLFVCNALMDMYAKCGSMEAA 406
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C AL +GK++H + N + + + LV +Y CG + ARL+FD IP+
Sbjct: 437 CVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 496
Query: 77 NVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKG 132
+ +++W VM + + G EAI F+ MR+ ++ +F +L AC GLL+ +
Sbjct: 497 D--LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLE-QGW 553
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
+ + + E + ++D+ S+ G L A + D W +++ G N
Sbjct: 554 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRN 613
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
++ A + ER + LEP Y ++A+
Sbjct: 614 YHDIELAEKVAER--VFELEPENSGYYVLLAN 643
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/516 (33%), Positives = 272/516 (52%), Gaps = 40/516 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
LV Y ++ A +F ++P + N M+ + G ++A+ F M+ +
Sbjct: 190 LVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPT 249
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
+FTF+ VL A +GL DI G+Q+H+ + F +V V NAL+D YSK + AR++F
Sbjct: 250 EFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFD 309
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------- 217
M E+D VS+ +ISGY K A LF ++ + QF +
Sbjct: 310 EMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEM 369
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
N+++ YA+ G A F+ +T VP W AMIS
Sbjct: 370 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVP----WTAMIS 425
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
+ Q E L+LF M + + + T +L+A S+ +G+++H+ + + G
Sbjct: 426 AYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMS 485
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
+VF+GSAL+D+Y+KCGS+KDA F+ +N+ SWNAMI Y ++G +++++ F+ M+
Sbjct: 486 NVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMV 545
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
G++ + V+ + VLSACSH GLVE+GL F SM + Y + +EHYA VVDMLCRSGR
Sbjct: 546 LSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRF 605
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM-GLRKPDGFVMLSNI 496
EA L+ ++P+ M + N C IH ++LA ++ F M LR +V +SNI
Sbjct: 606 NEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNI 665
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
AA G+W + K M+++ V+K P +S VE ++E
Sbjct: 666 YAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHE 701
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/526 (24%), Positives = 231/526 (43%), Gaps = 84/526 (15%)
Query: 54 VGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEA---------------- 97
VG + G+++ AR +F+K+P+ N N M+ +GN EA
Sbjct: 59 VGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWT 118
Query: 98 --IGYFSLMREF---------IYRC----NKFTFSIVLKACVGLLDIKKGKQVHAVATQ- 141
IG +S + +F + RC + TF +L C G + G Q+ V TQ
Sbjct: 119 ILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH---EMGNQITQVQTQI 175
Query: 142 --MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
+G+++ + VGN L+D Y K L A ++F M E D VS+ +MI+GY ++AV
Sbjct: 176 IKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAV 235
Query: 200 VLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------SNAAFAFF 237
LF M+ GL+P +FT+ A++ + D SNA F+
Sbjct: 236 NLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFY 295
Query: 238 SRMTA---------EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
S+ + E D V++N +ISG+A + A LF+ + +
Sbjct: 296 SKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFA 355
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
+L T ++GR+IHA ++ G++L+DMY+KCG ++A +F +
Sbjct: 356 TMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHR 415
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+ W AMI Y + G + ++LF +M + + A++ T S+L A + + G ++
Sbjct: 416 SAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQL- 474
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNI 465
S + G + + ++D+ + G + +A +++P + N+M A+
Sbjct: 475 HSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQ---- 530
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA-------ADGEWH 504
+G + + +E GL +PD L + A +G WH
Sbjct: 531 NGEAEATLKSFKEMVLSGL-QPDSVSFLGVLSACSHSGLVEEGLWH 575
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 164/356 (46%), Gaps = 59/356 (16%)
Query: 32 GKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G+Q+H+ + + N+F + + L+ Y+ V AR +FD++P + N ++ A
Sbjct: 269 GQQIHSFVIKTNFVWNVF-VSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYA 327
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
+ G + A F ++ + +F F+ +L LD + G+Q+HA ++++
Sbjct: 328 WDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL 387
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL-- 207
VGN+L+DMY+KCG A +F + R V WT+MIS Y +E + LF +M+
Sbjct: 388 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQAS 447
Query: 208 ---------------------------------EGLEPNQFTYNAIIASYARRGDSNAAF 234
G N F+ +A++ YA+ G A
Sbjct: 448 VIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 507
Query: 235 AFFSRMTAEGFVPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
F M PD +V+WNAMIS +AQ+ LK FK M++SG++P++V+ GVL
Sbjct: 508 QTFQEM------PDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLS 561
Query: 293 AGGLTGSIQIG-------REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
A +G ++ G +I+ L R + ++++DM + G +A L
Sbjct: 562 ACSHSGLVEEGLWHFNSMTQIYKLDPRREHY------ASVVDMLCRSGRFNEAEKL 611
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 165/337 (48%), Gaps = 11/337 (3%)
Query: 32 GKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G+Q+HA ++ T D I + + LV +YA CG A ++F + + + + W M SA
Sbjct: 370 GRQIHAQTIVTTADSEIL-VGNSLVDMYAKCGKFEEAEMIFTNLTHRSA--VPWTAMISA 426
Query: 90 FT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ G ++E + F+ MR+ ++ TF+ +L+A + + GKQ+H+ + GF ++
Sbjct: 427 YVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSN 486
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V G+AL+D+Y+KCG + A + F M +R++VSW +MIS Y + + + F+ M L
Sbjct: 487 VFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVL 546
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA-EGFVPDLVTWNAMISGFAQSKREN 266
GL+P+ ++ ++++ + G F+ MT P + +++ +S R N
Sbjct: 547 SGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFN 606
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
EA KL M I P+ + + VL A + + ++ R + M D +
Sbjct: 607 EAEKLMAEM---PIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMS 663
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
++Y+ G ++ + + R + V A KH
Sbjct: 664 NIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKH 700
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+ A + GF+ D S N + + K G L AR++F M ++ VS MISGY
Sbjct: 39 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW-- 252
+ EA LF+ M +E T+ +I Y++ AF F +M G PD VT+
Sbjct: 99 LGEARKLFDGM----VERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVT 154
Query: 253 ---------------------------------NAMISGFAQSKRENEALKLFKGMLV-- 277
N ++ + +S R + A +LFK M
Sbjct: 155 LLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEID 214
Query: 278 -----------------------------SGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
SG+KP T VL A I +G++IH+
Sbjct: 215 SVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHS 274
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
V + +VF +AL+D YSK S+ DAR LF+ ++ S+N +I Y G
Sbjct: 275 FVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKY 334
Query: 369 SIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
+ +LF + + ++LS S+ E G +I
Sbjct: 335 AFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQI 373
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 91/231 (39%), Gaps = 42/231 (18%)
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
I A + + G D + + + K G L AR LFE KN S N MI Y K G
Sbjct: 39 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98
Query: 366 VDSSIELFERMLEE-------------------------------GMRANEVTLISVLSA 394
+ + +LF+ M+E G + VT +++LS
Sbjct: 99 LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACV----VDMLCRSGRMVEAYDLLRQVPMY 450
C+ E G +I + + +K+ + V VD C+S R+ A L +++P
Sbjct: 159 CNGH---EMGNQITQVQTQI--IKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP-E 212
Query: 451 VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
+ + A G + G + AV + E GL KP F + +CA G
Sbjct: 213 IDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGL-KPTEFTFAAVLCANIG 262
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 294/552 (53%), Gaps = 39/552 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
+ +L C + L GKQ+H + ++ S+ + ++ Y C V + R +F+++
Sbjct: 258 ISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLV 317
Query: 75 NPNVFMLNWMV---MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+ +V M+ M ++F G +A+ F M ++ + F + VL +C L ++K
Sbjct: 318 DKDVVSWTTMIAGCMQNSFHG---DAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQK 374
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G+QVHA A ++ +ND V N LIDMY+KC L +AR+VF + +VVS+ +MI GY
Sbjct: 375 GRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSR 434
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY-------------------NAIIASYARRGDSNA 232
K+ EA+ LF M+L P T+ + +I + DS A
Sbjct: 435 QDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFA 494
Query: 233 AFAF---FSRMTAEG---------FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
A +S+ + G + D+V WNAM SG++Q E+LKL+K + +S +
Sbjct: 495 GSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRL 554
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
KPN T V+ A S++ G++ H V +MGL D F ++L+DMY+KCGS++++
Sbjct: 555 KPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHK 614
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
F T +++A WN+MI Y +HG ++E+FERM+ EG++ N VT + +LSACSH GL
Sbjct: 615 AFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGL 674
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
++ G F SM ++G++ +HYAC+V +L R+G++ EA + ++++P+ + +
Sbjct: 675 LDLGFHHFESM-SKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLL 733
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+ C + G +L E +++LSNI A+ G W +R+ M V K
Sbjct: 734 SACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRVVK 793
Query: 521 QPGFSRVEKRNE 532
+PG+S +E NE
Sbjct: 794 EPGWSWIEVNNE 805
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 147/538 (27%), Positives = 257/538 (47%), Gaps = 49/538 (9%)
Query: 23 CMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
C + L Q Q+H + +++ + + L+ YA G V+ ARL+FD +
Sbjct: 164 CTQLGNLSQALQLHGFVVKGGFVQDVY-VGTSLIDFYAKRGYVDEARLIFDGLKVKTTVT 222
Query: 81 LNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVAT 140
++ A G + ++ F+ MRE +++ S VL AC L ++ GKQ+H
Sbjct: 223 WTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVL 282
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ GF+ DVSV N +ID Y KC + + R++F+ + ++DVVSWT+MI+G S +A+
Sbjct: 283 RRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMD 342
Query: 201 LFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFVP-------- 247
LF M +G +P+ F +++ S ++G A+A + + FV
Sbjct: 343 LFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYA 402
Query: 248 ------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
++V++NAMI G+++ + EAL LF+ M +S P +T
Sbjct: 403 KCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVS 462
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
+L +++ +IH L+ + G+ +D F GSALID+YSKC + DAR +FE ++
Sbjct: 463 LLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRD 522
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ WNAM Y + + S++L++ + ++ NE T +V++A S+ + G + F
Sbjct: 523 IVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQ-FH 581
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVE---AYDLLRQVPMYVTNSMAGAFRNGCNIH 466
+ + G+ +VDM + G + E A+ Q + NSM + H
Sbjct: 582 NQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQ----H 637
Query: 467 GRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADG----EWHEAENLRKIMKEKNV 518
G A+ + E G+ KP+ FV L + C+ G +H E++ K E +
Sbjct: 638 GDAAKALEVFERMIMEGV-KPNYVTFVGLLSACSHAGLLDLGFHHFESMSKFGIEPGI 694
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 200/385 (51%), Gaps = 48/385 (12%)
Query: 33 KQVHA---LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
K++HA +L + ++F L + L+ Y+ + A+ +FD +P+ N ++ W M S
Sbjct: 71 KKIHAHIVVLGFHQHDVF-LVNTLLHAYSKMNLQSDAQKLFDTMPHRN--LVTWSSMVSM 127
Query: 90 FT--GNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
+T G EA+ F MR + N++ + V++AC L ++ + Q+H + GF
Sbjct: 128 YTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQ 187
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
DV VG +LID Y+K G + AR +F G+ + V+WT++I+GY + + + ++ LF +M+
Sbjct: 188 DVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMR 247
Query: 207 LEGLEPNQFTYNAIIASYA----------------RRG-DSNAAFA-------------- 235
+ P+++ ++++++ + RRG D + +
Sbjct: 248 EGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVK 307
Query: 236 ----FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
F+R+ + D+V+W MI+G Q+ +A+ LF M+ G KP+ T VL
Sbjct: 308 TGRKLFNRLVDK----DVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVL 363
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
+ G ++Q GR++HA ++ + D F + LIDMY+KC SL +AR +F++ NV
Sbjct: 364 NSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVV 423
Query: 352 SWNAMIGCYGKHGMVDSSIELFERM 376
S+NAMI Y + + +++LF M
Sbjct: 424 SYNAMIEGYSRQDKLVEALDLFREM 448
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 5/194 (2%)
Query: 215 FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLF-K 273
F N ++ +Y++ + A F M +LVTW++M+S + Q EAL LF +
Sbjct: 88 FLVNTLLHAYSKMNLQSDAQKLFDTMPHR----NLVTWSSMVSMYTQHGYSVEALLLFCR 143
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
M KPN + V++A G++ ++H V + G DV+ G++LID Y+K G
Sbjct: 144 FMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRG 203
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
+ +AR +F+ ++K +W A+I Y K G + S++LF +M E + + + SVLS
Sbjct: 204 YVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLS 263
Query: 394 ACSHGGLVEKGLEI 407
ACS +E G +I
Sbjct: 264 ACSMLEFLEGGKQI 277
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/526 (33%), Positives = 279/526 (53%), Gaps = 47/526 (8%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLV 69
+S N L L+ K SK + Q+HA+L + L+ L KL YA G ++ + +
Sbjct: 28 ISTNRLAVLIDK---SKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVAL 84
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
F + NP+VF ++ A G ++A+ +++ M N FTFS +LK C I
Sbjct: 85 FGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PI 140
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
+ GK +H+ A ++GF++D+ V L+D+Y++ G + SA+++F M E+ +VS T+M++ Y
Sbjct: 141 EPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCY 200
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL 249
++D A VLF+ M+ E + +N +I Y + G N A F R
Sbjct: 201 AKHGELDAARVLFDGME----ERDGVCWNVMIDGYTQNGMPNEALVLFRR---------- 246
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
ML + KPN VTV VL A G G+++ GR +H+
Sbjct: 247 -------------------------MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSY 281
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
+ G+ +V G+AL+DMYSKCGSL+DAR +F+ K+V +WN+MI Y HG +
Sbjct: 282 IENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEA 341
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
++LF+ M G+ +T I +LSAC H G V +G +IF MK+ YG++ EHY C+V+
Sbjct: 342 LQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVN 401
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
+L R+G + +AY+L++ + + + G C +HG+ L + E + L
Sbjct: 402 LLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGT 461
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
+++LSNI AA G W LR +MK+ V+K+PG S +E N+ E
Sbjct: 462 YILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHE 507
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 181/513 (35%), Positives = 269/513 (52%), Gaps = 43/513 (8%)
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI 118
G GD+ SA VF+K+P N M+ G EAI F M Y ++FT S
Sbjct: 217 GRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSG 276
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC---GLLCSARRVFHGMF 175
V+ AC + + G+Q+H+ A + G D VG LI+MY+KC G +C+AR++F +
Sbjct: 277 VISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQIL 336
Query: 176 ERDVVSWTSMISGYCNVSKVD-EAVVLFERMKLEGLEPNQFTY----------------- 217
+ +V SWT+MI+GY D EA+ LF M L + PN FT+
Sbjct: 337 DHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGE 396
Query: 218 ------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
N++I+ YAR G + A F + F +L+++N +I +
Sbjct: 397 QVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL----FEKNLISYNTVIDAY 452
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
A++ EAL+LF + G+ + T +L G+I G +IHA V + GL ++
Sbjct: 453 AKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQ 512
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+ALI MYS+CG+++ A +FE +NV SW ++I + KHG ++ELF +MLEE
Sbjct: 513 SVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEE 572
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G+R NEVT I+VLSACSH GLV +G + F+SM +GV EHYAC+VD+L RSG + E
Sbjct: 573 GVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSE 632
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A + +P + F C +HG +L + E P +++LSN+ A+
Sbjct: 633 AIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYAS 692
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+W E N+RK MKEK + K+ G S VE N+
Sbjct: 693 ISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENK 725
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 242/512 (47%), Gaps = 53/512 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPN 77
L KC+++++ G VH L +DL + S+ + L+ +Y+ CG A +F ++ +
Sbjct: 72 FLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIF-RLMGSS 130
Query: 78 VFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+++W M S F N A+ F M E Y N++ F+ +AC + G +
Sbjct: 131 RDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSI 190
Query: 136 HAVATQMGF-ENDVSVGNALIDMYSKC-GLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+ G+ ++DV VG LIDM+ K G L SA +VF M ER+ V+WT MI+
Sbjct: 191 FGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFG 250
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------------ 223
EA+ LF M G EP++FT + +I++
Sbjct: 251 YAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGC 310
Query: 224 -----YAR---RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS-KRENEALKLFKG 274
YA+ G AA F ++ ++ +W AMI+G+ Q + EAL LF+G
Sbjct: 311 CLINMYAKCSVDGSMCAARKIFDQILDH----NVFSWTAMITGYVQKGGYDEEALDLFRG 366
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M+++ + PN+ T + L+A +++IG ++ ++G ++LI MY++ G
Sbjct: 367 MILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGR 426
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
+ DAR F+I KN+ S+N +I Y K+ + ++ELF + ++GM A+ T S+LS
Sbjct: 427 IDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSG 486
Query: 395 CSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
+ G + KG +I R +K G+K+++ ++ M R G + A+ + +
Sbjct: 487 AASIGTIGKGEQIHARVIKS--GLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVI 544
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
S G HG A+ + + E G+R
Sbjct: 545 SWTSII-TGFAKHGFATQALELFHKMLEEGVR 575
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 197/446 (44%), Gaps = 60/446 (13%)
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
L F NPN L ++ G +AI M + T+S+ LK C+
Sbjct: 23 LQFPTFTNPNP--LTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTR 80
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMI 186
G VH TQ + D N+LI +YSKCG A +F M RD++SW++M+
Sbjct: 81 SFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMV 140
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNA---------------------IIASYA 225
S + N + A++ F M G PN++ + A I Y
Sbjct: 141 SCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYL 200
Query: 226 R----------------RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
+ RGD +AF F +M + VTW MI+ Q EA+
Sbjct: 201 QSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPER----NAVTWTLMITRLMQFGYAGEAI 256
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
LF M+ SG +P+ T++GV+ A + +G+++H+ R GL +D G LI+MY
Sbjct: 257 DLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMY 316
Query: 330 SKC---GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD-SSIELFERMLEEGMRANE 385
+KC GS+ AR +F+ NV SW AMI Y + G D +++LF M+ + N
Sbjct: 317 AKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNH 376
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV----VDMLCRSGRMVE-- 439
T S L AC++ + G ++F + VK+ CV + M RSGR+ +
Sbjct: 377 FTFSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCVANSLISMYARSGRIDDAR 431
Query: 440 -AYDLLRQVPMYVTNSMAGAFRNGCN 464
A+D+L + + N++ A+ N
Sbjct: 432 KAFDILFEKNLISYNTVIDAYAKNLN 457
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 188/396 (47%), Gaps = 50/396 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGC---GDVNSARLVFD 71
L ++ C + L G+Q+H+ + L + + L+ +YA C G + +AR +FD
Sbjct: 274 LSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFD 333
Query: 72 KIPNPNVFMLNWMVMASAFT---GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
+I + NVF +W M + + G +EA+ F M N FTFS LKAC L
Sbjct: 334 QILDHNVF--SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAA 391
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
++ G+QV A ++GF + V N+LI MY++ G + AR+ F +FE++++S+ ++I
Sbjct: 392 LRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDA 451
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------------- 217
Y +EA+ LF ++ +G+ + FT+
Sbjct: 452 YAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLN 511
Query: 218 ----NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
NA+I+ Y+R G+ +AF F M ++++W ++I+GFA+ +AL+LF
Sbjct: 512 QSVCNALISMYSRCGNIESAFQVFEDMEDR----NVISWTSIITGFAKHGFATQALELFH 567
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKC 332
ML G++PN VT VL A G + G + ++ G+ + + ++D+ +
Sbjct: 568 KMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRS 627
Query: 333 GSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVD 367
GSL +A K + W +G HG ++
Sbjct: 628 GSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLE 663
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 158/301 (52%), Gaps = 9/301 (2%)
Query: 20 LGKCMKSKALRQGKQV--HAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L C ALR G+QV HA+ L + +N + + L+ +YA G ++ AR FD +
Sbjct: 383 LKACANLAALRIGEQVFTHAVKLGFSSVN--CVANSLISMYARSGRIDDARKAFDILFEK 440
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N+ N ++ A A N +EA+ F+ + + + FTF+ +L + I KG+Q+H
Sbjct: 441 NLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIH 500
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + G + + SV NALI MYS+CG + SA +VF M +R+V+SWTS+I+G+
Sbjct: 501 ARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFAT 560
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM-TAEGFVPDLVTWNAM 255
+A+ LF +M EG+ PN+ TY A++++ + G N + F M T G +P + + +
Sbjct: 561 QALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACI 620
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ +S +EA++ M K + + L A + G++++G+ ++
Sbjct: 621 VDILGRSGSLSEAIQFINSM---PYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEP 677
Query: 316 H 316
H
Sbjct: 678 H 678
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 181/513 (35%), Positives = 269/513 (52%), Gaps = 43/513 (8%)
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI 118
G GD+ SA VF+K+P N M+ G EAI F M Y ++FT S
Sbjct: 217 GRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSG 276
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC---GLLCSARRVFHGMF 175
V+ AC + + G+Q+H+ A + G D VG LI+MY+KC G +C+AR++F +
Sbjct: 277 VISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQIL 336
Query: 176 ERDVVSWTSMISGYCNVSKVD-EAVVLFERMKLEGLEPNQFTY----------------- 217
+ +V SWT+MI+GY D EA+ LF M L + PN FT+
Sbjct: 337 DHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGE 396
Query: 218 ------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
N++I+ YAR G + A F + F +L+++N +I +
Sbjct: 397 QVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL----FEKNLISYNTVIDAY 452
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
A++ EAL+LF + G+ + T +L G+I G +IHA V + GL ++
Sbjct: 453 AKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQ 512
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+ALI MYS+CG+++ A +FE +NV SW ++I + KHG ++ELF +MLEE
Sbjct: 513 SVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEE 572
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G+R N VT I+VLSACSH GLV +G + F+SM +GV EHYAC+VD+L RSG + E
Sbjct: 573 GVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSE 632
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A + +P + F C +HG +L + E P +++LSN+ A+
Sbjct: 633 AIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYAS 692
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+W E N+RK MKEKN+ K+ G S VE N+
Sbjct: 693 TSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENK 725
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 243/512 (47%), Gaps = 53/512 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPN 77
L KC+++++ G VH L +DL + S+ + L+ +Y+ CG A +F ++ +
Sbjct: 72 FLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIF-QLMGSS 130
Query: 78 VFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+++W M S F N A+ F M E Y N++ F+ +AC + G +
Sbjct: 131 RDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSI 190
Query: 136 HAVATQMGF-ENDVSVGNALIDMYSKC-GLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+ G+ ++DV VG LIDM+ K G L SA +VF M ER+ V+WT MI+
Sbjct: 191 FGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFG 250
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------------ 223
EA+ LF M L G EP++FT + +I++
Sbjct: 251 YAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGC 310
Query: 224 -----YAR---RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS-KRENEALKLFKG 274
YA+ G AA F ++ ++ +W AMI+G+ Q + EAL LF+G
Sbjct: 311 CLINMYAKCSVDGSMCAARKIFDQILDH----NVFSWTAMITGYVQKGGYDEEALDLFRG 366
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M+++ + PN+ T + L+A +++IG ++ ++G ++LI MY++ G
Sbjct: 367 MILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGR 426
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
+ DAR F+I KN+ S+N +I Y K+ + ++ELF + ++GM A+ T S+LS
Sbjct: 427 IDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSG 486
Query: 395 CSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
+ G + KG +I R +K G+K+++ ++ M R G + A+ + +
Sbjct: 487 AASIGTIGKGEQIHARVIKS--GLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVI 544
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
S G HG A+ + + E G+R
Sbjct: 545 SWTSII-TGFAKHGFATQALELFHKMLEEGVR 575
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 199/446 (44%), Gaps = 60/446 (13%)
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
L F NPN L ++ G +AI M + T+S+ LK C+
Sbjct: 23 LQFPTFTNPNP--LTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTR 80
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMI 186
G VH TQ + D N+LI +YSKCG A +F M RD++SW++M+
Sbjct: 81 SFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMV 140
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNA--------------------------- 219
S + N + A++ F M G PN++ + A
Sbjct: 141 SCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYL 200
Query: 220 ---------IIASYAR-RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
+I + + RGD +AF F +M + VTW MI+ Q EA+
Sbjct: 201 QSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPER----NAVTWTLMITRLMQFGYAGEAI 256
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
LF M++SG +P+ T++GV+ A + +G+++H+ R GL +D G LI+MY
Sbjct: 257 DLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMY 316
Query: 330 SKC---GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD-SSIELFERMLEEGMRANE 385
+KC GS+ AR +F+ NV SW AMI Y + G D +++LF M+ + N
Sbjct: 317 AKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNH 376
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV----VDMLCRSGRMVE-- 439
T S L AC++ + G ++F + VK+ CV + M RSGR+ +
Sbjct: 377 FTFSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCVANSLISMYARSGRIDDAR 431
Query: 440 -AYDLLRQVPMYVTNSMAGAFRNGCN 464
A+D+L + + N++ A+ N
Sbjct: 432 KAFDILFEKNLISYNTVIDAYAKNLN 457
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 188/396 (47%), Gaps = 50/396 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGC---GDVNSARLVFD 71
L ++ C + L G+Q+H+ + L + + L+ +YA C G + +AR +FD
Sbjct: 274 LSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFD 333
Query: 72 KIPNPNVFMLNWMVMASAFT---GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
+I + NVF +W M + + G +EA+ F M N FTFS LKAC L
Sbjct: 334 QILDHNVF--SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAA 391
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
++ G+QV A ++GF + V N+LI MY++ G + AR+ F +FE++++S+ ++I
Sbjct: 392 LRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDA 451
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------------- 217
Y +EA+ LF ++ +G+ + FT+
Sbjct: 452 YAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLN 511
Query: 218 ----NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
NA+I+ Y+R G+ +AF F M ++++W ++I+GFA+ +AL+LF
Sbjct: 512 QSVCNALISMYSRCGNIESAFQVFEDMEDR----NVISWTSIITGFAKHGFATQALELFH 567
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKC 332
ML G++PN VT VL A G + G + ++ G+ + + ++D+ +
Sbjct: 568 KMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRS 627
Query: 333 GSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVD 367
GSL +A K + W +G HG ++
Sbjct: 628 GSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLE 663
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 170/335 (50%), Gaps = 10/335 (2%)
Query: 20 LGKCMKSKALRQGKQV--HAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L C ALR G+QV HA+ L + +N + + L+ +YA G ++ AR FD +
Sbjct: 383 LKACANLAALRIGEQVFTHAVKLGFSSVN--CVANSLISMYARSGRIDDARKAFDILFEK 440
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N+ N ++ A A N +EA+ F+ + + + FTF+ +L + I KG+Q+H
Sbjct: 441 NLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIH 500
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + G + + SV NALI MYS+CG + SA +VF M +R+V+SWTS+I+G+
Sbjct: 501 ARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFAT 560
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM-TAEGFVPDLVTWNAM 255
+A+ LF +M EG+ PN TY A++++ + G N + F M T G +P + + M
Sbjct: 561 QALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACM 620
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ +S +EA++ M K + + L A + G++++G+ ++
Sbjct: 621 VDILGRSGSLSEAIQFINSM---PYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEP 677
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
H D L ++Y+ + + + + KN+
Sbjct: 678 H-DPAAYILLSNLYASTSKWDEVSNIRKAMKEKNL 711
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/506 (34%), Positives = 276/506 (54%), Gaps = 31/506 (6%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
LV VY CG +++ VFD+I NV N ++ + +F G + +A+ F LM + R N
Sbjct: 282 LVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPN 341
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
T S +L L K G +VH + +M E+DV + N+LIDMY+K G A +F+
Sbjct: 342 SVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFN 401
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
M R++VSW +MI+ + EAV L +M+ +G PN T+ ++ + AR G N
Sbjct: 402 KMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNV 461
Query: 233 AFAFFSRMTAEGFVPDL------------------------------VTWNAMISGFAQS 262
+R+ G DL V++N +I G++++
Sbjct: 462 GKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNISVRDEVSYNILIIGYSRT 521
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
E+L+LF M + G++P+ V+ GV+ A I+ G+EIH L+ R H +F
Sbjct: 522 NDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVA 581
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
++L+D+Y++CG + A +F + K+VASWN MI YG G +D++I LFE M E+G+
Sbjct: 582 NSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVE 641
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
+ V+ ++VLSACSHGGL+EKG + F+ M + ++ + HYAC+VD+L R+G M EA D
Sbjct: 642 YDSVSFVAVLSACSHGGLIEKGRKYFKMMCD-LNIEPTHTHYACMVDLLGRAGLMEEAAD 700
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
L+R + + ++ GA C IHG +L + E FE+ + +++LSN+ A
Sbjct: 701 LIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAER 760
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVE 528
W EA +R++MK + +K PG S V+
Sbjct: 761 WDEANKVRELMKSRGAKKNPGCSWVQ 786
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 220/432 (50%), Gaps = 49/432 (11%)
Query: 19 LLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDK--IP 74
LL C L Q KQVHA LL SL + L+ YA G +++ L+F
Sbjct: 40 LLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAY 99
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ + F+ N ++ A++ G F + G ++ M + ++ T+ VLK C ++++KG++
Sbjct: 100 SRSAFLWNTLIRANSIAGVF-DGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGRE 158
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH VA ++GF+ DV VGN L+ Y CGL A +VF M ERD VSW ++I G C++
Sbjct: 159 VHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVI-GLCSLHG 217
Query: 195 VDEAVVLFERMKL---EGLEPNQFTY---------------------------------- 217
E + F R+ + G++P+ T
Sbjct: 218 FYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVK 277
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
NA++ Y + G A+ F + ++++WNA+I+ F+ + +AL +F+ M
Sbjct: 278 VGNALVDVYGKCGSEKASKKVFDEIDER----NVISWNAIITSFSFRGKYMDALDVFRLM 333
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+ G++PN+VT++ +L G G ++G E+H +M + DVF ++LIDMY+K GS
Sbjct: 334 IDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSS 393
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ A T+F ++N+ SWNAMI + ++ + ++EL +M +G N VT +VL AC
Sbjct: 394 RIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPAC 453
Query: 396 SHGGLVEKGLEI 407
+ G + G EI
Sbjct: 454 ARLGFLNVGKEI 465
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/510 (31%), Positives = 282/510 (55%), Gaps = 17/510 (3%)
Query: 26 SKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
S L Q Q+HA + + N+FS + ++L+ ++ A +F +PN+F+ N
Sbjct: 50 SNTLPQLHQIHAQIFLH--NLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFN 107
Query: 83 WMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
++ A F+ ++ +F LM R ++ T VLK+ L+D+ G+ +H ++
Sbjct: 108 ALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKL 167
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD----VVSWTSMISGYCNVSKVDEA 198
G E D V +L+DMY K G L ++F +R+ ++ W +I+G C V + +A
Sbjct: 168 GLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKA 227
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
LFE M E N ++N++I + R GD + A F +M + ++V+W MI+G
Sbjct: 228 ASLFEAMP----ERNAGSWNSLINGFVRNGDLDRARELFVQMPEK----NVVSWTTMING 279
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
F+Q+ +AL +F ML G++PN++TV L A G++Q+G IH + G ++
Sbjct: 280 FSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLN 339
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
G+AL+DMY+KCG++K A +F T+ K++ +W+ MI + HG D +++ F +M
Sbjct: 340 RGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKS 399
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
G+ +EV +++L+ACSH G V++GL F SM+ Y ++ + +HY +VD+L R+GR+
Sbjct: 400 AGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLD 459
Query: 439 EAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
EA ++ +P+ + GA C H ++A E+ ++ + P +V LSN+ A
Sbjct: 460 EALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYA 519
Query: 499 ADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
A G W + E +R +MK + V+K PG+S +E
Sbjct: 520 AVGRWEDVERVRTLMKNRGVEKDPGWSYIE 549
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 100/226 (44%), Gaps = 8/226 (3%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSAR 67
N+L+V + LL C K AL+ G+++H L +N + + + LV +YA CG++ SA
Sbjct: 304 NDLTV--VSALLA-CTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSAS 360
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
VF + ++ + M+ A G F +A+ F M+ ++ F +L AC
Sbjct: 361 RVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSG 420
Query: 128 DIKKGKQ-VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSM 185
++ +G ++ E + ++D+ + G L A M D V W ++
Sbjct: 421 NVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGAL 480
Query: 186 ISGYCNVSKVDEAVVLFER-MKLEGLEPNQFTY-NAIIASYARRGD 229
++ A + E+ ++LE P + + + + A+ R D
Sbjct: 481 FCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWED 526
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 284/547 (51%), Gaps = 41/547 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+G C SK L+QG+ +HA++ L F L + L+ +YA C D+ AR FD++
Sbjct: 65 IGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKT 124
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLM---REFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ N ++ + G+ + A+ + M + + TFS L AC + DI +G++
Sbjct: 125 LVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGRE 184
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+ A G+ +D V NALI+MYSKCG L SAR+VF + RDV++W +MISGY
Sbjct: 185 IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGA 244
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV---- 250
+A+ LF+RM +PN T+ ++ + D A ++ G+ DLV
Sbjct: 245 ATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNV 304
Query: 251 ----------------------------TWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
TWN +I + Q + +AL +FK M + + P
Sbjct: 305 LLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAP 364
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N +T++ VL A + G+ + G+ +HAL+ DV ++L++MY++CGSL D +F
Sbjct: 365 NEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVF 424
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
R K++ SW+ +I Y +HG + +E F +L+EG+ A++VT++S LSACSHGG+++
Sbjct: 425 AAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLK 484
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G++ F SM +G+ H+ C+VD+L R+GR+ A +L+ +P + +G
Sbjct: 485 EGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFV-MLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C +H A + ++ FE+ V +LSN+ A G W +++RK + +K
Sbjct: 545 CKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRW---DDVRKTRNRRAARKN 601
Query: 522 PGFSRVE 528
PG S +E
Sbjct: 602 PGCSYIE 608
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 201/386 (52%), Gaps = 38/386 (9%)
Query: 56 VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFT 115
+Y CG V A VF I +PN +V A A G+++EA+GY+ M R +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 116 FSIVLKACVGLLDIKKGKQVHA--VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
F + + C D+K+G+ +HA + TQ+ E D+ +G ALI MY++C L AR+ F
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQL-LEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERM---KLEGLEPNQFTYNAIIASYARRGDS 230
M ++ +V+W ++I+GY A+ +++ M EG++P+ T+++ + + + GD
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179
Query: 231 NAAFAFFSRMTAEGFVP-------------------------------DLVTWNAMISGF 259
+ +R A G+ D++ WN MISG+
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
A+ +AL+LF+ M + KPN VT G+L A ++ GR IH V G D+
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299
Query: 320 FTGSALIDMYSKC-GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
G+ L++MY+KC SL++AR +FE R ++V +WN +I Y ++G ++++F++M
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359
Query: 379 EGMRANEVTLISVLSACSHGGLVEKG 404
E + NE+TL +VLSAC+ G +G
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQG 385
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 146/296 (49%), Gaps = 43/296 (14%)
Query: 157 MYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT 216
MY KCG + A VFH + + VSWT +++ + EA+ + RM LEGL P+
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 217 Y------------------------------------NAIIASYARRGDSNAAFAFFSRM 240
+ A+I YAR D A F M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 241 TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML---VSGIKPNNVTVTGVLQAGGLT 297
+ LVTWNA+I+G++++ ALK+++ M+ G+KP+ +T + L A +
Sbjct: 121 GKK----TLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVV 176
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
G I GREI A G D +ALI+MYSKCGSL+ AR +F+ + ++V +WN MI
Sbjct: 177 GDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMI 236
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
Y K G ++ELF+RM + N VT I +L+AC++ +E+G I R +KE
Sbjct: 237 SGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKE 292
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 18/347 (5%)
Query: 19 LLGKCMKSKALRQGKQVHALL----CTNDLNIFSLKSKLVGVYAGCGD-VNSARLVFDKI 73
LL C + L QG+ +H + +DL I ++ L+ +Y C + AR VF+++
Sbjct: 270 LLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNV---LLNMYTKCSSSLEEARQVFERL 326
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+V N +++A G ++A+ F M+ N+ T S VL AC L ++GK
Sbjct: 327 RTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGK 386
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VHA+ + DV + N+L++MY++CG L VF + ++ +VSW+++I+ Y
Sbjct: 387 AVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHG 446
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD-SNAAFAFFSRMTAEGFVPDLVTW 252
+ F + EGL + T + +++ + G +F S + G PD +
Sbjct: 447 HSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHF 506
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
M+ +++ R A L M P+ V T +L L + + +
Sbjct: 507 LCMVDLLSRAGRLEAAENLIHDM---PFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
+ + T + L ++Y++ G D R TR + A N GC
Sbjct: 564 LESEDEHSTVTLLSNVYAEAGRWDDVRK----TRNRRAARKNP--GC 604
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALL----CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
L +L C A RQGK VHAL+ C D+ L++ L+ +Y CG ++ VF
Sbjct: 369 LSNVLSACAVLGAKRQGKAVHALIASGRCKADV---VLENSLMNMYNRCGSLDDTVGVFA 425
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
I + ++ + ++ A A G+ + + +F + + + T L AC +K+
Sbjct: 426 AIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKE 485
Query: 132 GKQVH-AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISG 188
G Q ++ G D ++D+ S+ G L +A + H M F D V+WTS++SG
Sbjct: 486 GVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 288/557 (51%), Gaps = 43/557 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L KC L Q KQ+HA + +L+ + KL+ + C N A VF+++ PNV
Sbjct: 26 LPKCAN---LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
+ N ++ A A +A FS M+ F + FT+ +LKAC G + K +H
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 139 ATQMGFENDVSVGNALIDMYSKC---------------------------------GLLC 165
++G +D+ V NALID YS+C G L
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
ARR+F M +RD++SW +M+ GY ++ +A LFE+M E N +++ ++ Y+
Sbjct: 203 DARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP----ERNTVSWSTMVMGYS 258
Query: 226 RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ GD A F +M ++VTW +I+G+A+ EA +L M+ SG+K +
Sbjct: 259 KAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
V +L A +G + +G IH+++ R L + + +AL+DMY+KCG+LK A +F
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI 376
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
K++ SWN M+ G HG +IELF RM EG+R ++VT I+VL +C+H GL+++G+
Sbjct: 377 PKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGI 436
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
+ F SM++ Y + EHY C+VD+L R GR+ EA +++ +PM + GA C +
Sbjct: 437 DYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRM 496
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
H D+A + + ++ P + +LSNI AA +W ++R MK V+K G S
Sbjct: 497 HNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGAS 556
Query: 526 RVEKRNEFVEKEVQNES 542
VE + E V ++S
Sbjct: 557 SVELEDGIHEFTVFDKS 573
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 278/523 (53%), Gaps = 49/523 (9%)
Query: 51 SKLVGVYAGCGD-VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIY 109
S L GV +G D N A + + NV N ++ A G+ EA+ FS +R+
Sbjct: 1952 SILFGVPSGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGL 2011
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
+ +F +K+C L D+ G+ H A GFE D+ V +ALIDMYSKCG L AR
Sbjct: 2012 IPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARA 2071
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF-----ERMKLE---------------- 208
+F + R+VVSWTSMI+GY + D A++LF E ++E
Sbjct: 2072 LFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVL 2131
Query: 209 ----------------------GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
G + + N ++ +YA+ G + F M +
Sbjct: 2132 SACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEK--- 2188
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGRE 305
D ++WN+MI+ +AQS EAL++F GM+ G++ N VT++ VL A G+++ G+
Sbjct: 2189 -DDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKC 2247
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
IH V +M L +V G+++IDMY KCG ++ A+ F+ + KNV SW AM+ YG HG
Sbjct: 2248 IHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGR 2307
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
++++F +M+ G++ N +T +SVL+ACSH GLVE+G F +MK +Y ++ EHY
Sbjct: 2308 AKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYG 2367
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
C+VD+ R+G + EAY+L++++ M + G+ C IH DL ++ FE+
Sbjct: 2368 CMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPD 2427
Query: 486 KPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+V+LSN+ A G W + E +R +MK + + K PGFS VE
Sbjct: 2428 NCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVE 2470
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 147/447 (32%), Positives = 214/447 (47%), Gaps = 43/447 (9%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGC 60
N + P N+ LL C K LRQ +HA + + L N L KL+ +Y+
Sbjct: 16 NIPLTPRGNIRAKKALFLLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTH 72
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
G + A L+F +I NP F N ++ A+ G ++A+ + M +KFTF V+
Sbjct: 73 GRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVI 132
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
KAC L I GK VH + GF DV V N LID Y KCG A +VF M R+VV
Sbjct: 133 KACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVV 192
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
SWT++ISG + + EA +F+ + N ++ A+I Y R A F RM
Sbjct: 193 SWTTVISGLISCGDLQEARRIFDEIP----SKNVVSWTAMINGYIRNQQPEEALELFKRM 248
Query: 241 TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI 300
AE I PN T+ +++A G +
Sbjct: 249 QAE-----------------------------------NIFPNEYTMVSLIKACTEMGIL 273
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY 360
+GR IH + + I V+ G+ALIDMYSKCGS+KDA +FE K++ +WN+MI
Sbjct: 274 TLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSL 333
Query: 361 GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKIS 420
G HG+ ++ LF M ++ + +T I VL AC H V++G F M + YG+
Sbjct: 334 GVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPI 393
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQV 447
EHY C+ ++ RS + EA+ ++V
Sbjct: 394 PEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 182/412 (44%), Gaps = 63/412 (15%)
Query: 18 CLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C + C L G+ H A + + ++F + S L+ +Y+ CG + AR +FD+IP
Sbjct: 2020 CTIKSCSALCDLVSGRMSHQQAFVFGFETDLF-VSSALIDMYSKCGQLKDARALFDEIPL 2078
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR-----------CNKFTFSIVLKACV 124
NV ++W M + + N ++A L ++F+ + VL AC
Sbjct: 2079 RNV--VSWTSMITGYVQN-EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 2135
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
+ + VH + GF+ + VGN L+D Y+KCG +++VF M E+D +SW S
Sbjct: 2136 RVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNS 2195
Query: 185 MISGYCNVSKVDEAVVLFERM-KLEGLEPNQFTYNA------------------------ 219
MI+ Y EA+ +F M + G+ N T +A
Sbjct: 2196 MIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKM 2255
Query: 220 -----------IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
II Y + G A F RM + ++ +W AM++G+ R EA
Sbjct: 2256 DLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEK----NVKSWTAMVAGYGMHGRAKEA 2311
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE-IHALVCRMGLHIDVFTGSALID 327
L +F M+ +G+KPN +T VL A G ++ G +A+ + + + ++D
Sbjct: 2312 LDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVD 2371
Query: 328 MYSKCGSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVD----SSIELFE 374
++ + G L +A L + ++K + W +++G H VD ++ +LFE
Sbjct: 2372 LFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE 2423
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/490 (34%), Positives = 274/490 (55%), Gaps = 13/490 (2%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
L+ YA G V + +VFD++P + N ++ A G+ +A+ M+E ++
Sbjct: 95 LLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPT 154
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
+++ L+AC LLD++ GKQ+H + V NA+ DMY+KCG + AR +F
Sbjct: 155 QYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFD 214
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
GM +++VVSW MISGY + +E + LF M+L GL+P+ T + ++ +Y R G +
Sbjct: 215 GMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDD 274
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
A F ++ + D + W MI G+AQ+ RE +A LF ML +KP++ T++ ++
Sbjct: 275 ARNLFIKLPKK----DEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVS 330
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
+ S+ G+ +H V MG+ + SAL+DMY KCG DAR +FE I+NV +
Sbjct: 331 SCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVIT 390
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
WNAMI Y ++G V ++ L+ERM +E + + +T + VLSAC + +V++G + F S+
Sbjct: 391 WNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSIS 450
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL- 471
E +G+ + +HYAC++ +L RSG + +A DL++ +P + + C + DL
Sbjct: 451 E-HGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVC---AKGDLK 506
Query: 472 -AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE-- 528
A FE+ R ++MLSN+ AA G W + +R +MKEKN +K +S VE
Sbjct: 507 NAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVG 566
Query: 529 -KRNEFVEKE 537
K + FV ++
Sbjct: 567 NKVHRFVSED 576
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 159/342 (46%), Gaps = 19/342 (5%)
Query: 24 MKSKALRQGKQVHALLCTNDLNIFSLKSKLVGV------YAGCGDVNSARLVFDKIPNPN 77
M S ++ G + N++ + LK LV V Y CG V+ AR +F K+P +
Sbjct: 227 MISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKD 286
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
M++ A G ++A F M + + +T S ++ +C L + G+ VH
Sbjct: 287 EICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHG 346
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
MG +N + V +AL+DMY KCG+ AR +F M R+V++W +MI GY +V E
Sbjct: 347 KVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLE 406
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
A+ L+ERM+ E +P+ T+ ++++ +F ++ G P L + MI+
Sbjct: 407 ALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMIT 466
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNN---VTVTGVLQAGGLTGSIQIGREIHALVCR-M 313
+S ++A+ L +GM +PN T+ V G L + + L R
Sbjct: 467 LLGRSGSVDKAVDLIQGM---PHEPNYRIWSTLLSVCAKGDLKNAELAASHLFELDPRNA 523
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
G +I L ++Y+ CG KD + + + KN + A
Sbjct: 524 GPYI------MLSNLYAACGRWKDVAVVRSLMKEKNAKKFAA 559
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 153/346 (44%), Gaps = 66/346 (19%)
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D + N L+ +Y+K G L A+ VF M +RDV SW +++S Y + V+ V+F++M
Sbjct: 57 DSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMP 116
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
+ +YN +IA +A G S A RM +GF
Sbjct: 117 YR----DSVSYNTLIACFASNGHSGKALKVLVRMQEDGF--------------------- 151
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
+P + LQA ++ G++IH + L + F +A+
Sbjct: 152 --------------QPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMT 197
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
DMY+KCG + AR LF+ KNV SWN MI Y K G + I LF M G++ + V
Sbjct: 198 DMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLV 257
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML---CRSGRMVEAY-- 441
T+ +VL+A G V+ +F +K+ K+ C M+ ++GR +A+
Sbjct: 258 TVSNVLNAYFRCGRVDDARNLF--------IKLPKKDEICWTTMIVGYAQNGREEDAWML 309
Query: 442 --DLLR---QVPMYVTNSMA------GAFRNGCNIHGRRDLAVTMG 476
D+LR + Y +SM + +G +HG+ V MG
Sbjct: 310 FGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGK---VVVMG 352
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 191/443 (43%), Gaps = 88/443 (19%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C + LR GKQ+H + DL N F +++ + +YA CGD++ ARL+FD + + N
Sbjct: 162 LQACSQLLDLRHGKQIHGRIVVADLGENTF-VRNAMTDMYAKCGDIDKARLLFDGMIDKN 220
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V N M+ GN E I F+ M+
Sbjct: 221 VVSWNLMISGYVKMGNPNECIHLFNEMQ-------------------------------- 248
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
G + D+ + +++ Y +CG + AR +F + ++D + WT+MI GY + ++
Sbjct: 249 ---LSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREED 305
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIAS---------------------------------- 223
A +LF M ++P+ +T +++++S
Sbjct: 306 AWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVD 365
Query: 224 -YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y + G + A F M + +++TWNAMI G+AQ+ + EAL L++ M KP
Sbjct: 366 MYCKCGVTLDARVIFETMP----IRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKP 421
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+N+T GVL A ++ G++ + G+ + + +I + + GS+ A L
Sbjct: 422 DNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLI 481
Query: 343 E-ITRIKNVASWNAMIGCYGKHGMVDSSI---ELFERMLEEGMRANEVTLISVLSACSHG 398
+ + N W+ ++ K + ++ + LFE L+ + L ++ +AC
Sbjct: 482 QGMPHEPNYRIWSTLLSVCAKGDLKNAELAASHLFE--LDPRNAGPYIMLSNLYAACGRW 539
Query: 399 GLVEKGLEIFRS-MKERYGVKIS 420
K + + RS MKE+ K +
Sbjct: 540 ----KDVAVVRSLMKEKNAKKFA 558
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 282/558 (50%), Gaps = 48/558 (8%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+ LL +C+ +++Q KQ+HA L TN +I S L + A D A + F I +
Sbjct: 35 FNSLLQQCL---SIKQLKQIHAQLLTN--SIHKPNSFLYKI-ADLKDFAYASVFFSNILD 88
Query: 76 PNVFMLNWMVMASAFTGNFQE-AIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
P + N M+ + N A+ ++S M+ + N T+ + AC LL ++ G+
Sbjct: 89 PTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRM 148
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H + G + D V ++LI MY++CG + AR+VF + ++D+VSW SMISGY +
Sbjct: 149 GHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRH 208
Query: 195 VDEAVVLFERMKLEGLEPNQ-----------------------------------FTYNA 219
EAV LF M G +PN+ F +A
Sbjct: 209 AGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSA 268
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+I Y + GD +A F M + D VTWNAMI+G+AQ+ EA+KLF+ M +S
Sbjct: 269 LIHMYGKCGDLVSARRIFDSMKKK----DKVTWNAMITGYAQNGMSEEAIKLFQDMRMSS 324
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
P+ +T+ G+L A G++ +G+++ G DV+ G+AL+DMY+KCGSL +A
Sbjct: 325 TAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAF 384
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG--MRANEVTLISVLSACSH 397
+F KN SWNAMI HG ++ LF+ M+ EG + N++T + VLSAC H
Sbjct: 385 RVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVH 444
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
GLV++G +F M +G+ EHY+C+VD+ R+G + EA+D + +P + G
Sbjct: 445 AGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILG 504
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
A C D++ + + E+ +V+ S + A W ++ +R +MK+K
Sbjct: 505 ALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKG 564
Query: 518 VQKQPGFSRVEKRNEFVE 535
V K PG S ++ ++ E
Sbjct: 565 VSKTPGCSWIDINSQLHE 582
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 258/495 (52%), Gaps = 46/495 (9%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFS 102
N+ S + +VG Y G+V A+ +FD++ ++W M S + N F EA+ F
Sbjct: 207 NVVSYNTMIVG-YCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFR 265
Query: 103 --LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSK 160
LM E I + FT VL AC + +++GK+VHA A G + VG AL++MYSK
Sbjct: 266 DLLMEEGI-EADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSK 324
Query: 161 CGLLCSARRVFHGMFERDVVSWTSMISGY--CNVSKVDEAVVLFERMKLEGLEPNQFTYN 218
C L +A+ F G+ ERD +W +ISGY CN +LE ++
Sbjct: 325 CEDLKAAQLAFDGVTERDTATWNVLISGYACCN--------------QLENIQ------- 363
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+M +GF P++ TWN +ISG ++ AL+LF M S
Sbjct: 364 ----------------NLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTS 407
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
++P+ TV +L A +I G+++HA R G +DV G+AL+DMY+KCGS+K A
Sbjct: 408 SLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHA 467
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
++ N+ S NAM+ Y HG D I LF ML G R + VT +SVLS+C H
Sbjct: 468 MQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHA 527
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
G VE G E F M Y V S +HY C+VD+L R+GR+ EAY+L++++P + M GA
Sbjct: 528 GAVETGHEFFDLMT-YYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGA 586
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
GC I G +L E E+ +V+L+N+ A G WH+ + R+++K++ +
Sbjct: 587 LLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGM 646
Query: 519 QKQPGFSRVEKRNEF 533
K PG S +E R +
Sbjct: 647 HKSPGCSWIEDREDI 661
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 214/493 (43%), Gaps = 100/493 (20%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
T++ +L++C L GKQVHA + GF V L+ MY + G L A VF M
Sbjct: 64 TYASLLESCRTL---NLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKM 120
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE--GLE--------------------- 211
+R++ SWT+++S + + +EA+ LFE+++L+ GLE
Sbjct: 121 PQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGR 180
Query: 212 -------------------------PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
N +YN +I Y G+ A F +M G
Sbjct: 181 QLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVG-- 238
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
D ++WN+MISG+A + +EAL +F+ +L+ GI+ ++ T+ VL A S++ G+E
Sbjct: 239 KDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKE 298
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE---------------------- 343
+HA GLH + F G AL++MYSKC LK A+ F+
Sbjct: 299 VHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQ 358
Query: 344 -------ITRIK------NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
I ++K NV +WN +I + ++G + ++ LF M +R + T+
Sbjct: 359 LENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGI 418
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM---VEAYDLLRQV 447
+L AC+ + +G ++ + R G ++ A +VDM + G + ++ Y+ +
Sbjct: 419 ILPACARLATIARGKQV-HAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNP 477
Query: 448 PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHE 505
+ N+M A+ +HG D + + G R PD LS + C G
Sbjct: 478 NLVSQNAMLTAYA----MHGHGDEGIALFRNMLGNGFR-PDHVTFLSVLSSCVHAGAVET 532
Query: 506 AENLRKIMKEKNV 518
+M NV
Sbjct: 533 GHEFFDLMTYYNV 545
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 153/326 (46%), Gaps = 41/326 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L +L C +LR+GK+VHA L N F + LV +Y+ C D+ +A+L FD +
Sbjct: 280 LGSVLAACADMASLRRGKEVHAQAVVRGLHWNTF-VGGALVEMYSKCEDLKAAQLAFDGV 338
Query: 74 P-----------------------------------NPNVFMLNWMVMASAFTGNFQEAI 98
PNV+ N ++ G+ + A+
Sbjct: 339 TERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELAL 398
Query: 99 GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMY 158
F+ M+ R + +T I+L AC L I +GKQVHA + + G+E DV +G AL+DMY
Sbjct: 399 RLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMY 458
Query: 159 SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYN 218
+KCG + A +V++ + ++VS +M++ Y DE + LF M G P+ T+
Sbjct: 459 AKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFL 518
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
++++S G FF MT P L + ++ +++ R +EA +L K +
Sbjct: 519 SVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKI--- 575
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGR 304
KP++V +L + G++++G
Sbjct: 576 PRKPDSVMWGALLGGCVIWGNVELGE 601
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/551 (31%), Positives = 276/551 (50%), Gaps = 41/551 (7%)
Query: 29 LRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
L +GK++H AL D +I + + L+ +YA CG+ A+ +F + ++ + ++
Sbjct: 345 LEKGKEIHGCALQQRIDSDIL-VATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
A TG +EA+ F M+ + N+ T +L AC L +K GK +H + ++
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDS 463
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D+S G AL+ MY+KCG +A F+ M RD+V+W S+I+GY + A+ +F +++
Sbjct: 464 DLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLR 523
Query: 207 LEGLEPNQFTY-----------------------------------NAIIASYARRGDSN 231
L + P+ T NA+I YA+ G
Sbjct: 524 LSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLP 583
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
+A F++ F D VTWN +I+ + Q+ EA+ F M + PN+VT VL
Sbjct: 584 SAEFLFNKT---DFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVL 640
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A + + G HA + +MG + G++LIDMY+KCG L + LF K+
Sbjct: 641 PAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTV 700
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SWNAM+ Y HG D +I LF M E ++ + V+ +SVLSAC H GLVE+G +IF SM
Sbjct: 701 SWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSM 760
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
++Y +K EHYAC+VD+L R+G E ++ +P+ + GA C +H L
Sbjct: 761 SDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKL 820
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+ ++ R P FV+LS+I A G W +A R M + ++K PG S VE +N
Sbjct: 821 GEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKN 880
Query: 532 EFVEKEVQNES 542
+ V ++S
Sbjct: 881 KVHAFRVGDKS 891
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 244/500 (48%), Gaps = 44/500 (8%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
SV+ L+ G C K + + +H + D + ++ + L+ +Y+ CGDV+ AR VFD
Sbjct: 230 SVSLLNLFPGIC-KLSNIELCRSIHGYVFRRDFSS-AVSNGLIDLYSKCGDVDVARRVFD 287
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
++ + + M+ A G F E + F M+ R NK + A +D++K
Sbjct: 288 QMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEK 347
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GK++H A Q ++D+ V L+ MY+KCG A+++F G+ RD+V+W+++I+
Sbjct: 348 GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQ 407
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY---------------------------------- 217
+EA+ LF+ M+ + ++PN+ T
Sbjct: 408 TGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLST 467
Query: 218 -NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
A+++ YA+ G AA F+RM++ D+VTWN++I+G+AQ A+ +F +
Sbjct: 468 GTALVSMYAKCGFFTAALTTFNRMSSR----DIVTWNSLINGYAQIGDPYNAIDMFYKLR 523
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+S I P+ T+ GV+ A L + G IH L+ ++G D +ALIDMY+KCGSL
Sbjct: 524 LSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLP 583
Query: 337 DARTLFEITRI-KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
A LF T K+ +WN +I Y ++G +I F +M E N VT +SVL A
Sbjct: 584 SAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAA 643
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
++ +G+ F + + G + ++DM + G++ + L ++ T S
Sbjct: 644 AYLAAFREGMA-FHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSW 702
Query: 456 AGAFRNGCNIHGRRDLAVTM 475
A +G +HG D A+ +
Sbjct: 703 -NAMLSGYAVHGHGDRAIAL 721
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 210/430 (48%), Gaps = 42/430 (9%)
Query: 13 VNYLDC--LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
NYL LL C K L Q+HA + + + L+ +Y+ + AR VF
Sbjct: 30 TNYLHYPRLLSSC---KHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVF 86
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
D PNP+ + N M+ A + + EA+ + M E +K+TF+ VLKAC G L+++
Sbjct: 87 DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQ 146
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
+G H + G E DV +G L+DMYSK G L AR VF M +RDVV+W +MI+G
Sbjct: 147 EGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLS 206
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
EAV F M+L G+EP+ +
Sbjct: 207 QSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS 266
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
N +I Y++ GD + A F +M + D V+W M++G+A + E L+LF M +
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQ----DDVSWGTMMAGYAHNGCFVEVLELFDKMKL 322
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
++ N V+ A T ++ G+EIH + + D+ + L+ MY+KCG +
Sbjct: 323 GNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEK 382
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A+ LF + +++ +W+A+I + G + ++ LF+ M + M+ N VTL+S+L AC+
Sbjct: 383 AKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACAD 442
Query: 398 GGLVEKGLEI 407
L++ G I
Sbjct: 443 LSLLKLGKSI 452
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
P + WN+MI + +SK+ NEAL+++ M+ G++P+ T T VL+A ++Q G
Sbjct: 92 PSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWF 151
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H + R GL DVF G+ L+DMYSK G LK AR +F+ ++V +WNAMI +
Sbjct: 152 HGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDP 211
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
+++ F M G+ + V+L+++ G +E+ RS+ +G ++ +
Sbjct: 212 CEAVDFFRSMQLVGVEPSSVSLLNLFP----GICKLSNIELCRSI---HGYVFRRDFSSA 264
Query: 427 V----VDMLCRSGRMVEA---YD-LLRQVPMYVTNSMAGAFRNGC 463
V +D+ + G + A +D ++ Q + MAG NGC
Sbjct: 265 VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGC 309
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 305 EIHALVCRMGL-HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
+IHA + G H T LI++YS AR++F+ T + WN+MI Y +
Sbjct: 50 QIHAQIIVSGFKHHHSITH--LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRS 107
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
+ ++E++ M+E+G+ ++ T VL AC+ +++G+ F +R G++
Sbjct: 108 KQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV-WFHGEIDRRGLERDVFI 166
Query: 424 YACVVDMLCRSGRMVEAYDLLRQVP 448
A +VDM + G + A ++ ++P
Sbjct: 167 GAGLVDMYSKMGDLKRAREVFDKMP 191
>gi|297830768|ref|XP_002883266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329106|gb|EFH59525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 564
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/523 (33%), Positives = 281/523 (53%), Gaps = 48/523 (9%)
Query: 47 FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLM 104
L L+ +Y GDV AR +FD+IP +V ++W M S F+ G ++A+ F M
Sbjct: 47 LQLNDMLIDLYLKQGDVKHARKLFDRIPKRDV--VSWTAMISRFSRCGYHRDALLLFKQM 104
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
R N+FT+ VLK+C L +K+G Q+ + ++ V +AL+ +Y++CG +
Sbjct: 105 HRQDVRANQFTYGSVLKSCKDLGCLKEGMQIQGCLEKGKCAGNLIVRSALLSLYARCGKM 164
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------- 217
AR F M ERD+VSW SMI GY + VD + LF+ M EG +P+ FT+
Sbjct: 165 EDARLQFDSMKERDLVSWNSMIDGYTTNACVDTSFSLFQLMFAEGKKPDCFTFGSLLRAS 224
Query: 218 ----------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDL 249
+++ +Y + G A+ T DL
Sbjct: 225 IVVKCLEPVGQLHGLAIKLGFGRSSALIRSLVDAYVKCGSIANAWKLHEDTTKR----DL 280
Query: 250 VTWNAMISGFAQSKR-ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
++ A+I+GFAQ ++A +F M++ K + V V+ +L+ S+ +GR+IH
Sbjct: 281 ISCTALITGFAQQNICTSDAFDIFNEMILMKTKMDEVVVSSMLKICTTIASVTVGRQIHG 340
Query: 309 LVCRMG-LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+ + D+ G++LIDMY+K G ++DA FE + K+V SW ++I YG+HG +
Sbjct: 341 FALKSSQIRFDIALGNSLIDMYAKSGDIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFE 400
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+I+L+ RM EG++ N+VT +S+LSACSH G E G +IF M ++G+K +EH++C+
Sbjct: 401 KAIDLYNRMEHEGIKPNDVTFLSLLSACSHTGQTELGWKIFNKMINKHGIKAREEHFSCI 460
Query: 428 VDMLCRSGRMVEAYDLLRQVP--MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
+DML RSG + EAY+L+R + +++S GAF + C HG L+ + + +
Sbjct: 461 IDMLARSGYLEEAYELIRSKDGIISLSSSTWGAFLDACRRHGNVQLSKVAASQLLSVEPK 520
Query: 486 KPDGFVMLSNICAADGEWHEAENLRKIMKEK-NVQKQPGFSRV 527
KP ++ L+++ AA+G W A R++MKE + K PG+S V
Sbjct: 521 KPVNYINLASVHAANGAWDSALKTRQLMKESGSCNKTPGYSLV 563
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 284/556 (51%), Gaps = 44/556 (7%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVF 70
N L L+ C L +G+Q+HA T L S ++ L+ +YA C D+ +A F
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAY--TTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ NV + N M++A + + + F M+ N++T+ +LK C+ L D++
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
G+Q+H+ + F+ + V + LIDMY+K G L +A + +DVVSWT+MI+GY
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 191 NVSKVDEAVVLFERM--------------------KLEGLEPNQFTY------------- 217
+ D+A+ F +M L+ L+ Q +
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
NA++ Y+R G ++ F + A D + WNA++SGF QS EAL++F M
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEA----GDNIAWNALVSGFQQSGNNEEALRVFVRM 683
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
GI NN T ++A T +++ G+++HA++ + G + +ALI MY+KCGS+
Sbjct: 684 NREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSI 743
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
DA F KN SWNA+I Y KHG +++ F++M+ +R N VTL+ VLSAC
Sbjct: 744 SDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSAC 803
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH GLV+KG+ F SM YG+ EHY CVVDML R+G + A + ++++P+ +
Sbjct: 804 SHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALV 863
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
+ C +H ++ E+ +V+LSN+ A +W + R+ MKE
Sbjct: 864 WRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKE 923
Query: 516 KNVQKQPGFSRVEKRN 531
K V+K+PG S +E +N
Sbjct: 924 KGVKKEPGQSWIEVKN 939
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 223/471 (47%), Gaps = 51/471 (10%)
Query: 16 LDCLLGKCMKSK-ALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKI 73
L LL C+K+ +L +G+++H+ + L+ L KL Y GD+ A VFD++
Sbjct: 87 LKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEM 146
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG---LLDIK 130
P +F N M+ A E G F M N+ TFS VL+AC G D+
Sbjct: 147 PERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV 206
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
+Q+HA G + V N LID+YS+ G + ARRVF G+ +D SW +MISG
Sbjct: 207 --EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 264
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
EA+ LF M + G+ P + +
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
NA+++ Y G+ +A FS M+ D VT+N +I+G +Q +A++LFK M
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQR----DAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+ G++P++ T+ ++ A G++ G+++HA ++G + AL+++Y+KC +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ A F T ++NV WN M+ YG + +S +F +M E + N+ T S+L C
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYAC--VVDMLCRSGRMVEAYDLL 444
G +E G +I + + Y C ++DM + G++ A+D+L
Sbjct: 501 IRLGDLELGEQIHSQIIK---TNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 213/453 (47%), Gaps = 45/453 (9%)
Query: 33 KQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT 91
+Q+HA + L ++ + L+ +Y+ G V+ AR VFD + + +W+ M S +
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD--HSSWVAMISGLS 264
Query: 92 GNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
N EAI F M + FS VL AC + ++ G+Q+H + ++GF +D
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
V NAL+ +Y G L SA +F M +RD V++ ++I+G ++A+ LF+RM L+G
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 384
Query: 210 LEPNQFTYNAIIAS-----------------------------------YARRGDSNAAF 234
LEP+ T +++ + YA+ D A
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
+F E V ++V WN M+ + + ++F+ M + I PN T +L+
Sbjct: 445 DYF----LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
G +++G +IH+ + + ++ + S LIDMY+K G L A + K+V SW
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
MI Y ++ D ++ F +ML+ G+R++EV L + +SAC+ +++G +I +
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACV 619
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
G +V + R G++ E+Y Q
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 652
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 161/338 (47%), Gaps = 47/338 (13%)
Query: 110 RCNKFTFSIVLKACV---GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
R N T +L+ C+ G LD +G+++H+ ++G +++ + L D Y G L
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLD--EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------- 217
A +VF M ER + +W MI + + + E LF RM E + PN+ T+
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 218 ---------------------------NAIIASYARRGDSNAAFAFFSRMTAEGF-VPDL 249
N +I Y+R G F +R +G + D
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNG-----FVDLARRVFDGLRLKDH 253
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
+W AMISG ++++ E EA++LF M V GI P + VL A S++IG ++H L
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
V ++G D + +AL+ +Y G+L A +F ++ ++N +I + G + +
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
+ELF+RM +G+ + TL S++ ACS G + +G ++
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 279 GIKPNNVTVTGVLQAGGLT-GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
GI+PN+ T+ +L+ T GS+ GR++H+ + ++GL + L D Y G L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A +F+ + + +WN MI ++ LF RM+ E + NE T VL AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
G + +E + G++ S ++D+ R+G + DL R+V
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV----DLARRV 244
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 284/556 (51%), Gaps = 44/556 (7%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVF 70
N L L+ C L +G+Q+HA T L S ++ L+ +YA C D+ +A F
Sbjct: 350 NTLASLVVACSADGTLFRGQQLHAY--TTKLGFASNNKIEGALLNLYAKCADIETALDYF 407
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ NV + N M++A + + + F M+ N++T+ +LK C+ L D++
Sbjct: 408 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 467
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
G+Q+H+ + F+ + V + LIDMY+K G L +A + +DVVSWT+MI+GY
Sbjct: 468 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 527
Query: 191 NVSKVDEAVVLFERM--------------------KLEGLEPNQFTY------------- 217
+ D+A+ F +M L+ L+ Q +
Sbjct: 528 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 587
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
NA++ Y+R G ++ F + A D + WNA++SGF QS EAL++F M
Sbjct: 588 FQNALVTLYSRCGKIEESYLAFEQTEA----GDNIAWNALVSGFQQSGNNEEALRVFVRM 643
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
GI NN T ++A T +++ G+++HA++ + G + +ALI MY+KCGS+
Sbjct: 644 NREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSI 703
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
DA F KN SWNA+I Y KHG +++ F++M+ +R N VTL+ VLSAC
Sbjct: 704 SDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSAC 763
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH GLV+KG+ F SM YG+ EHY CVVDML R+G + A + ++++P+ +
Sbjct: 764 SHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALV 823
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
+ C +H ++ E+ +V+LSN+ A +W + R+ MKE
Sbjct: 824 WRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKE 883
Query: 516 KNVQKQPGFSRVEKRN 531
K V+K+PG S +E +N
Sbjct: 884 KGVKKEPGQSWIEVKN 899
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 223/471 (47%), Gaps = 51/471 (10%)
Query: 16 LDCLLGKCMKSK-ALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKI 73
L LL C+K+ +L +G+++H+ + L+ L KL Y GD+ A VFD++
Sbjct: 47 LKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEM 106
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG---LLDIK 130
P +F N M+ A E G F M N+ TFS VL+AC G D+
Sbjct: 107 PERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV 166
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
+Q+HA G + V N LID+YS+ G + ARRVF G+ +D SW +MISG
Sbjct: 167 --EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 224
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
EA+ LF M + G+ P + +
Sbjct: 225 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 284
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
NA+++ Y G+ +A FS M+ D VT+N +I+G +Q +A++LFK M
Sbjct: 285 VCNALVSLYFHLGNLISAEHIFSNMSQR----DAVTYNTLINGLSQCGYGEKAMELFKRM 340
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+ G++P++ T+ ++ A G++ G+++HA ++G + AL+++Y+KC +
Sbjct: 341 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 400
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ A F T ++NV WN M+ YG + +S +F +M E + N+ T S+L C
Sbjct: 401 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 460
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYAC--VVDMLCRSGRMVEAYDLL 444
G +E G +I + + Y C ++DM + G++ A+D+L
Sbjct: 461 IRLGDLELGEQIHSQIIK---TNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 508
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 213/453 (47%), Gaps = 45/453 (9%)
Query: 33 KQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT 91
+Q+HA + L ++ + L+ +Y+ G V+ AR VFD + + +W+ M S +
Sbjct: 167 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD--HSSWVAMISGLS 224
Query: 92 GNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
N EAI F M + FS VL AC + ++ G+Q+H + ++GF +D
Sbjct: 225 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 284
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
V NAL+ +Y G L SA +F M +RD V++ ++I+G ++A+ LF+RM L+G
Sbjct: 285 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 344
Query: 210 LEPNQFTYNAIIAS-----------------------------------YARRGDSNAAF 234
LEP+ T +++ + YA+ D A
Sbjct: 345 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 404
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
+F E V ++V WN M+ + + ++F+ M + I PN T +L+
Sbjct: 405 DYF----LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 460
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
G +++G +IH+ + + ++ + S LIDMY+K G L A + K+V SW
Sbjct: 461 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 520
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
MI Y ++ D ++ F +ML+ G+R++EV L + +SAC+ +++G +I +
Sbjct: 521 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACV 579
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
G +V + R G++ E+Y Q
Sbjct: 580 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 612
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 161/338 (47%), Gaps = 47/338 (13%)
Query: 110 RCNKFTFSIVLKACV---GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
R N T +L+ C+ G LD +G+++H+ ++G +++ + L D Y G L
Sbjct: 41 RPNHQTLKWLLEGCLKTNGSLD--EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 98
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------- 217
A +VF M ER + +W MI + + + E LF RM E + PN+ T+
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158
Query: 218 ---------------------------NAIIASYARRGDSNAAFAFFSRMTAEGF-VPDL 249
N +I Y+R G F +R +G + D
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNG-----FVDLARRVFDGLRLKDH 213
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
+W AMISG ++++ E EA++LF M V GI P + VL A S++IG ++H L
Sbjct: 214 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 273
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
V ++G D + +AL+ +Y G+L A +F ++ ++N +I + G + +
Sbjct: 274 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 333
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
+ELF+RM +G+ + TL S++ ACS G + +G ++
Sbjct: 334 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 371
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 279 GIKPNNVTVTGVLQAGGLT-GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
GI+PN+ T+ +L+ T GS+ GR++H+ + ++GL + L D Y G L
Sbjct: 39 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 98
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A +F+ + + +WN MI ++ LF RM+ E + NE T VL AC
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
G + +E + G++ S ++D+ R+G + DL R+V
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV----DLARRV 204
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 282/558 (50%), Gaps = 48/558 (8%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+ LL +C+ +++Q KQ+HA L TN +I S L + A D A + F I +
Sbjct: 35 FNSLLQQCL---SIKQLKQIHAQLLTN--SIHKPNSFLYKI-ADLKDFAYASVFFSNILD 88
Query: 76 PNVFMLNWMVMASAFTGNFQE-AIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
P + N M+ + N A+ ++S M+ + N T+ + AC LL ++ G+
Sbjct: 89 PTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRM 148
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H + G + D V ++LI MY++CG + AR+VF + ++D+VSW SMISGY +
Sbjct: 149 GHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRH 208
Query: 195 VDEAVVLFERMKLEGLEPNQ-----------------------------------FTYNA 219
EAV LF M G +PN+ F +A
Sbjct: 209 AGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSA 268
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+I Y + GD +A F M + D VTWNAMI+G+AQ+ EA+KLF+ M +S
Sbjct: 269 LIHMYGKCGDLVSARRIFDSMKKK----DKVTWNAMITGYAQNGMSEEAIKLFQDMRMSS 324
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
P+ +T+ G+L A G++ +G+++ G DV+ G+AL+DMY+KCGSL +A
Sbjct: 325 TAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAF 384
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG--MRANEVTLISVLSACSH 397
+F KN SWNAMI HG ++ LF+ M+ EG + N++T + VLSAC H
Sbjct: 385 RVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVH 444
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
GLV++G +F M +G+ EHY+C+VD+ R+G + EA+D + +P + G
Sbjct: 445 AGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILG 504
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
A C D++ + + E+ +V+ S + A W ++ +R +MK+K
Sbjct: 505 ALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKG 564
Query: 518 VQKQPGFSRVEKRNEFVE 535
V K PG S ++ ++ E
Sbjct: 565 VSKTPGCSWIDINSQLHE 582
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 184/573 (32%), Positives = 293/573 (51%), Gaps = 54/573 (9%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C+ K L GKQ+H + + + + S+ + + Y C V R +FD++
Sbjct: 245 LSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMV 304
Query: 75 NPNVFMLNWM-VMASAFTGNFQ-EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ NV ++W V+A +F +A+ F M + + F + VL +C L+ ++KG
Sbjct: 305 DKNV--VSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKG 362
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+QVHA A ++ +ND V N LIDMY+KC L AR+VF+ M D+VS+ +MI GY
Sbjct: 363 RQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQ 422
Query: 193 SKVDEAVVLFERMKLE-----------------------------------GLEPNQFTY 217
K+ EA+ LF M+L G+ ++F
Sbjct: 423 DKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAG 482
Query: 218 NAIIASYA---RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
+A+I Y+ R GD+ F E D+V W AM SG+ Q E+LKL+K
Sbjct: 483 SALIDVYSKCSRVGDARLVFE-------EIQDKDIVVWTAMFSGYTQQSENEESLKLYKC 535
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
+ +S +KPN T V+ A S++ G++ H V +MG D F + L+DMY+K GS
Sbjct: 536 LQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGS 595
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
+++A F T K+ A WN+MI Y +HG + ++++FE M+ EG++ N VT + VLSA
Sbjct: 596 IEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSA 655
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS 454
CSH GL++ G + F SM + +G++ EHY C+V +L R+G++ EA + + ++P+
Sbjct: 656 CSHTGLLDLGFDHFDSMSQ-FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAV 714
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMK 514
+ + + C + G +L E +V+LSNI A+ G W LR+ M
Sbjct: 715 VWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMD 774
Query: 515 EKNVQKQPGFSRVEKRNE---FVEKEVQNESKA 544
V K+PG S +E NE F+ K+ + A
Sbjct: 775 ISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSA 807
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 239/517 (46%), Gaps = 45/517 (8%)
Query: 23 CMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
C + L Q+H L+ +++ S L+ Y ++ ARL+FD + F
Sbjct: 151 CTQFGGLNPALQIHGLVVKGGYVQDVYVCTS-LIDFYTKHACIDDARLLFDGLQVKTSFT 209
Query: 81 LNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVAT 140
++ + G Q ++ F M+E +K+ S VL AC+ L ++ GKQ+H
Sbjct: 210 WTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVL 269
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ G DVS+ N ID Y KC + R++F M +++VVSWT++I+G S +A+
Sbjct: 270 RSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALD 329
Query: 201 LFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFVP-------- 247
LF M G P+ F +++ S +G A+A + + FV
Sbjct: 330 LFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYA 389
Query: 248 ------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
DLV++NAMI G+++ + EAL LF+ M +S P +
Sbjct: 390 KCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVS 449
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
+L +++ +IH L+ + G+ +D F GSALID+YSKC + DAR +FE + K+
Sbjct: 450 LLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKD 509
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ W AM Y + + S++L++ + ++ NE T +V++A S+ + G + F
Sbjct: 510 IVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQ-FH 568
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT---NSMAGAFRNGCNIH 466
+ + G +VDM +SG + EA+ T NSM + H
Sbjct: 569 NQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQ----H 624
Query: 467 GRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADG 501
G + A+ + E+ GL KP+ FV + + C+ G
Sbjct: 625 GEAEKALQVFEDMIMEGL-KPNYVTFVGVLSACSHTG 660
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 218/458 (47%), Gaps = 41/458 (8%)
Query: 20 LGKCMKSKALRQGKQVHALLCT---NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L ++S + K++H+ + + +IF L + L+ Y+ VN A +FD + +
Sbjct: 45 LANLLQSPHIPCCKKIHSKIVVFGFHKHDIF-LVNTLLHAYSKLNLVNHANKLFDTMSHK 103
Query: 77 NVFMLNWMVMASAFTGNFQ--EAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
N ++ W M S +T + EA+ F MR + N++ + V++AC +
Sbjct: 104 N--LVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPAL 161
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H + + G+ DV V +LID Y+K + AR +F G+ + +WT++I+GY
Sbjct: 162 QIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQG 221
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIAS-----YARRGDSNAAFAFFSRMTAE----- 243
+ ++ LF++MK + P+++ ++++++ + G + S + +
Sbjct: 222 RSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVN 281
Query: 244 GFV---------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
GF+ ++V+W +I+G Q+ +AL LF M G P
Sbjct: 282 GFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNP 341
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ T VL + G +++ GR++HA ++ + D F + LIDMY+KC SL DAR +F
Sbjct: 342 DAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVF 401
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ ++ S+NAMI Y + + +++LF M + +S+L + +E
Sbjct: 402 NLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLE 461
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+I + +YGV + + + ++D+ + R+ +A
Sbjct: 462 LSNQI-HGLIIKYGVSLDEFAGSALIDVYSKCSRVGDA 498
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 281/531 (52%), Gaps = 38/531 (7%)
Query: 7 PINNLSVN-YLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNS 65
P N L++N + LL +C+ L+Q + L + ++ K A +++
Sbjct: 48 PQNQLNLNNSVLALLERCIHLNHLKQLQAFLITLGHAQTHFYAFKLLRFCTLA-LSNLSY 106
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACV 124
AR +FD + +PNV++ M+ A A + A+ Y +++R N F + VLK+C
Sbjct: 107 ARFIFDHVESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCT 166
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSK-CGLLCSARRVFHGMFERDVVSWT 183
++ + VH + GFE V AL+D Y + + SAR +F M ER+VVSWT
Sbjct: 167 QVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWT 226
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE 243
+MISGY + ++ AV+LFE M E + ++NA+IA Y + G A + F RM A
Sbjct: 227 AMISGYTRLGQIGNAVLLFEEMP----ERDVPSWNALIAGYTQNGLFMEALSLFRRMIA- 281
Query: 244 GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
+ G G +PN VT L A G TG +++G
Sbjct: 282 ---------------------------VEAGAWGQGNRPNQVTAVCSLSACGHTGMLRLG 314
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
+ IH V R GL +D F +AL+DMY KCG LK+AR +F+ T +++ SWN+MI C H
Sbjct: 315 KWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRTLERSLTSWNSMINCLALH 374
Query: 364 GMVDSSIELFERMLE--EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
G ++I +FE M+ G++ +EVT I +L+AC+HGGLVEKG F M + YG++
Sbjct: 375 GQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHGGLVEKGWLYFELMTQNYGIEPQI 434
Query: 422 EHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFE 481
EHY C+VD+L R+G+ EA +++R + + + G+ NGC IHG DLA ++ +
Sbjct: 435 EHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCKIHGHTDLAEFSIKKLID 494
Query: 482 MGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
M +ML+NI G+W E +RK++KE+N K PG S +E N+
Sbjct: 495 MDPNNGGYGIMLANIYGELGKWDEVRKVRKVLKEQNAHKTPGCSWIEIDNQ 545
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 285/555 (51%), Gaps = 45/555 (8%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
+ +L C + L GKQ+HA + + S+ + L+ Y C V + R +FD++
Sbjct: 141 VSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV 200
Query: 75 NPNVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
N+ ++W M S + N EA+ F M ++ + F + VL +C L +++G
Sbjct: 201 VKNI--ISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQG 258
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+QVHA + E++ V N LIDMY+K LL A++VF M E++V+S+ +MI GY +
Sbjct: 259 RQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQ 318
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTY----------------------------------- 217
K+ EA+ LF M++ P+ T+
Sbjct: 319 EKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAG 378
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
+A+I Y++ A F M + D+V WNAM G+ Q EALKL+ +
Sbjct: 379 SALIDVYSKCSYVKDARHVFEEMNEK----DIVVWNAMFFGYTQHLENEEALKLYSTLQF 434
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
S KPN T ++ A S++ G++ H + +MGL F +AL+DMY+KCGS+++
Sbjct: 435 SRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEE 494
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
AR +F + ++V WN+MI + +HG + ++ +F M++EG++ N VT ++VLSACSH
Sbjct: 495 ARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSH 554
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
G VE GL F SM +G+K EHYACVV +L RSG++ EA + + ++P+ +
Sbjct: 555 AGXVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWR 613
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
+ + C I G +L E + +++LSNI A+ G W + + +R M
Sbjct: 614 SLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSE 673
Query: 518 VQKQPGFSRVEKRNE 532
V K+PG S +E N+
Sbjct: 674 VVKEPGRSWIEVNNK 688
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 154/555 (27%), Positives = 266/555 (47%), Gaps = 69/555 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C + + +G Q+H + + D +++ + + L+ Y+ GB+ ARLVFD++
Sbjct: 40 LASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVY-VGTSLIDFYSKNGBIEVARLVFDQL 98
Query: 74 PNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+ W + + +T G ++ F+ MRE +++ S VL AC L ++
Sbjct: 99 LEKTA--VTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEG 156
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GKQ+HA + G E DVSV N LID Y+KC + + R++F M ++++SWT+MISGY
Sbjct: 157 GKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQ 216
Query: 192 VSKVDEAVVLFERMKLEG-----------------------------------LEPNQFT 216
S EA+ LF M G LE N+F
Sbjct: 217 NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFV 276
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
N +I YA+ A F M + +++++NAMI G++ ++ +EAL+LF M
Sbjct: 277 KNGLIDMYAKSNLLXDAKKVFDVMAEQ----NVISYNAMIEGYSSQEKLSEALELFHEMR 332
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
V P+ +T +L ++++ ++IH L+ + G+ +D+F GSALID+YSKC +K
Sbjct: 333 VRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVK 392
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
DAR +FE K++ WNAM Y +H + +++L+ + + NE T ++++A S
Sbjct: 393 DARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAAS 452
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL-----RQVPMYV 451
+ + G + F + + G+ +VDM + G + EA + R V +
Sbjct: 453 NLASLRHGQQ-FHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCW- 510
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENL 509
NSM HG + A+ M E + G+ +P+ FV + + C+ G + N
Sbjct: 511 -NSMISTHAQ----HGEAEEALGMFREMMKEGI-QPNYVTFVAVLSACSHAGXVEDGLN- 563
Query: 510 RKIMKEKNVQKQPGF 524
+ PGF
Sbjct: 564 -------HFNSMPGF 571
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 182/359 (50%), Gaps = 43/359 (11%)
Query: 92 GNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
G +EA+ F L R+ N+F + V++AC L ++KG Q+H + GF+ DV V
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
G +LID YSK G + AR VF + E+ V+WT++I+GY + ++ LF +M+ +
Sbjct: 75 GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134
Query: 211 EPNQFTYNAIIASYA----------------RRGDS------NAAFAFFS---------R 239
P+++ ++++++ + RRG N F++ +
Sbjct: 135 VPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRK 194
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
+ + V ++++W MISG+ Q+ + EA+KLF M G KP+ T VL + G +
Sbjct: 195 LFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEA 254
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
++ GR++HA + L + F + LIDMY+K L DA+ +F++ +NV S+NAMI
Sbjct: 255 LEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEG 314
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLEI 407
Y + ++ELF M + +T +S+L + HG +++ G+ +
Sbjct: 315 YSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSL 373
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 267 EALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EAL +F + SG PN + V++A G ++ G ++H V R G DV+ G++L
Sbjct: 19 EALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSL 78
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
ID YSK G ++ AR +F+ K +W +I Y K G S+ELF +M E + +
Sbjct: 79 IDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDR 138
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
+ SVLSACS +E G +I + R G ++ ++D + R+ L
Sbjct: 139 YVVSSVLSACSMLEFLEGGKQIHAYVLRR-GTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 197
Query: 446 QVP----MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
Q+ + T ++G +N + A+ + E +G KPDGF S
Sbjct: 198 QMVVKNIISWTTMISGYMQNSFDWE-----AMKLFGEMNRLGW-KPDGFACTS 244
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 184/572 (32%), Positives = 288/572 (50%), Gaps = 62/572 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C K+L GK+VH+++ +N + + +L KLV YA CGD+ R VFD + N
Sbjct: 105 VLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKN 164
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMRE--------------FIYRCNKFTFSI----- 118
V++ N+MV A G+F+E+I F +M E F C++ S
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMIS 224
Query: 119 --------------------------------VLKACVGLLDIKKGKQVHAVATQMGFEN 146
VL C + GK VH++A + FE
Sbjct: 225 GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
++ N L+DMYSKCG L A RVF M ER+VVSWTSMI+GY D A++L ++M+
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQME 344
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
EG++ + +I+ + AR G + + A +L NA++ +A+
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSME 404
Query: 267 EALKLFKGMLVSGI----------KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
A +F M+V I KP++ T+ +L A +++ G+EIH + R G
Sbjct: 405 GANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYS 464
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
D +AL+D+Y KCG L AR LF++ K++ SW MI YG HG + +I F M
Sbjct: 465 SDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEM 524
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
+ G+ +EV+ IS+L ACSH GL+E+G F MK + ++ EHYAC+VD+L R+G
Sbjct: 525 RDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGN 584
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
+ +AY + +P+ ++ GA GC I+ +LA + E FE+ +V+L+NI
Sbjct: 585 LSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANI 644
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
A + E + +R+ + +K ++K PG S +E
Sbjct: 645 YAEAEKREEVKRMREKIGKKGLRKNPGCSWIE 676
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 166/325 (51%), Gaps = 24/325 (7%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
T+ VL+ C GL + GK+VH++ D ++G L+ Y+ CG L RRVF M
Sbjct: 101 TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
+++V W M+S Y + E++ LF+ M +G+E +R +S A
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE-------------GKRPES--AS 205
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F ++ D+++WN+MISG+ + L ++K M+ GI + T+ VL
Sbjct: 206 ELFDKLCDR----DVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
+G++ +G+ +H+L + + + L+DMYSKCG L A +FE +NV SW
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
+MI Y + G D +I L ++M +EG++ + V + S+L AC+ G ++ G ++ +K
Sbjct: 322 SMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 381
Query: 415 YGVKISKEHYAC--VVDMLCRSGRM 437
++ + C ++DM + G M
Sbjct: 382 ---NMASNLFVCNALMDMYAKCGSM 403
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C AL +GK++H + N + + + LV +Y CG + ARL+FD IP+
Sbjct: 437 CILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 496
Query: 77 NVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKG 132
+ +++W VM + + G EAI F+ MR+ ++ +F +L AC GLL+ +
Sbjct: 497 D--LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLE-QGW 553
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
+ + + E + ++D+ S+ G L A + + D W +++ G
Sbjct: 554 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRI 613
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
++ A + ER + LEP Y ++A+
Sbjct: 614 YHDIELAEKVAER--VFELEPENTGYYVLLAN 643
>gi|224118458|ref|XP_002331487.1| predicted protein [Populus trichocarpa]
gi|222873565|gb|EEF10696.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/484 (35%), Positives = 268/484 (55%), Gaps = 3/484 (0%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
GD+N A L+F ++ NPN ++ N M+ + Q +F M + + +F L
Sbjct: 98 GDINHAHLLFSQLQNPNTYIWNTMIRGYSKAKMGQTGFLFFCQMVQKGVEMDCRSFVFAL 157
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
KAC L + +GK VH V +MGF + V N L+ Y G L AR VF + ERDVV
Sbjct: 158 KACEQFLGVLEGKSVHCVVWKMGFVYTLLVQNGLVHFYGLRGCLGLARLVFDEISERDVV 217
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGL-EPNQFTYNAIIASYARRGDSNAAFAFFSR 239
SWTSMI GY DEA+ LF+ M + G+ EPN+ T A+++S +++GD F
Sbjct: 218 SWTSMIDGYSKHKWCDEALKLFDSMLMYGVVEPNEVTMIAVLSSCSQKGDLILGKTFLEY 277
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
+ L NA++ + + + A ++F M + P T+ VL G G
Sbjct: 278 VKTRNVTRSLNLMNAILDMYVKCGCLDSAREIFDTM-GAAFAPMENTLACVLPVCGQLGC 336
Query: 300 IQIGREIHALVCRMGLH-IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
+ +G+ IH RM + I V +ALIDMY+KCG + +A +F +N+ SWN+MI
Sbjct: 337 LDVGQWIHRNYVRMRYNEISVILANALIDMYAKCGVIHEAAKVFNDMPERNLVSWNSMIT 396
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
Y HG ++ +FERM+ G + +++TL+ VLSACSHGGLV +G E F++MK +YG++
Sbjct: 397 AYASHGHAKQALSVFERMISGGFKPDDITLVGVLSACSHGGLVAEGQEYFQNMKRKYGIE 456
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEE 478
EHYAC++D+L R G + +AY+L+ ++PM + + GA + C +HG ++A
Sbjct: 457 PKNEHYACMIDLLGRVGLLEDAYELITKMPMEPSAAAWGALVHACRMHGNVEVAKIAAPR 516
Query: 479 FFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEV 538
E+ +V+L+NICA+ W + + R++M+E+ V+K PG S VE +F E
Sbjct: 517 LLELDPEDSGIYVLLANICASGRRWGDVKMARRMMRERRVKKIPGRSIVEVEGQFHEFLA 576
Query: 539 QNES 542
+ES
Sbjct: 577 GDES 580
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 177/374 (47%), Gaps = 26/374 (6%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSL--KSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C + + +GK VH ++ +++L ++ LV Y G + ARLVFD+I +
Sbjct: 157 LKACEQFLGVLEGKSVHCVVWKMGF-VYTLLVQNGLVHFYGLRGCLGLARLVFDEISERD 215
Query: 78 VFMLNWMVMASAFTGN--FQEAIGYFSLMREF-IYRCNKFTFSIVLKACVGLLDIKKGKQ 134
V ++W M ++ + EA+ F M + + N+ T VL +C D+ GK
Sbjct: 216 V--VSWTSMIDGYSKHKWCDEALKLFDSMLMYGVVEPNEVTMIAVLSSCSQKGDLILGKT 273
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE-----RDVVSWTSMISGY 189
+++ NA++DMY KCG L SAR +F M + ++ + G
Sbjct: 274 FLEYVKTRNVTRSLNLMNAILDMYVKCGCLDSAREIFDTMGAAFAPMENTLACVLPVCGQ 333
Query: 190 CNVSKVDEAVVL-FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
V + + + RM+ E + NA+I YA+ G + A F+ M +
Sbjct: 334 LGCLDVGQWIHRNYVRMRYN--EISVILANALIDMYAKCGVIHEAAKVFNDMPER----N 387
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE-IH 307
LV+WN+MI+ +A +AL +F+ M+ G KP+++T+ GVL A G + G+E
Sbjct: 388 LVSWNSMITAYASHGHAKQALSVFERMISGGFKPDDITLVGVLSACSHGGLVAEGQEYFQ 447
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI---KNVASWNAMIGCYGKHG 364
+ + G+ + +ID+ + G L+DA L IT++ + A+W A++ HG
Sbjct: 448 NMKRKYGIEPKNEHYACMIDLLGRVGLLEDAYEL--ITKMPMEPSAAAWGALVHACRMHG 505
Query: 365 MVDSSIELFERMLE 378
V+ + R+LE
Sbjct: 506 NVEVAKIAAPRLLE 519
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 44/292 (15%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + L GK + T ++ +L + ++ +Y CG ++SAR +FD
Sbjct: 258 VLSSCSQKGDLILGKTFLEYVKTRNVTRSLNLMNAILDMYVKCGCLDSAREIFD------ 311
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQV 135
M +AF + T + VL C +G LD+ G+ +
Sbjct: 312 -------TMGAAFAP-------------------MENTLACVLPVCGQLGCLDV--GQWI 343
Query: 136 HAVATQMGFENDVSV--GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
H +M + N++SV NALIDMY+KCG++ A +VF+ M ER++VSW SMI+ Y +
Sbjct: 344 HRNYVRMRY-NEISVILANALIDMYAKCGVIHEAAKVFNDMPERNLVSWNSMITAYASHG 402
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTW 252
+A+ +FERM G +P+ T ++++ + G +F M + G P +
Sbjct: 403 HAKQALSVFERMISGGFKPDDITLVGVLSACSHGGLVAEGQEYFQNMKRKYGIEPKNEHY 462
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
MI + +A +L M ++P+ ++ A + G++++ +
Sbjct: 463 ACMIDLLGRVGLLEDAYELITKM---PMEPSAAAWGALVHACRMHGNVEVAK 511
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 8/223 (3%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVH---ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
N L C+L C + L G+ +H + N++++ L + L+ +YA CG ++ A VF
Sbjct: 322 NTLACVLPVCGQLGCLDVGQWIHRNYVRMRYNEISVI-LANALIDMYAKCGVIHEAAKVF 380
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ +P N+ N M+ A A G+ ++A+ F M ++ + T VL AC +
Sbjct: 381 NDMPERNLVSWNSMITAYASHGHAKQALSVFERMISGGFKPDDITLVGVLSACSHGGLVA 440
Query: 131 KGKQ-VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISG 188
+G++ + + G E +ID+ + GLL A + M E +W +++
Sbjct: 441 EGQEYFQNMKRKYGIEPKNEHYACMIDLLGRVGLLEDAYELITKMPMEPSAAAWGALVHA 500
Query: 189 YCNVSKVDEAVVLFER-MKLEGLEPNQFTYNAIIASYARR-GD 229
V+ A + R ++L+ + + A I + RR GD
Sbjct: 501 CRMHGNVEVAKIAAPRLLELDPEDSGIYVLLANICASGRRWGD 543
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 189/552 (34%), Positives = 279/552 (50%), Gaps = 41/552 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK-LVGVYAGCGDVNSARLVFDKIPNPN 77
LL C L G+ VHA L L S+ S L +Y C AR VFD++P+ +
Sbjct: 22 LLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRD 81
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMR--EFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
N +V A G A+ M+ E R + T VL AC + ++V
Sbjct: 82 RVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREV 141
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA A + G + V+V A++D Y KCG + +AR VF M R+ VSW +MI GY +
Sbjct: 142 HAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNA 201
Query: 196 DEAVVLFERMKLEG-----------------------------------LEPNQFTYNAI 220
EA+ LF RM EG L N NA+
Sbjct: 202 TEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNAL 261
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I +YA+ ++ A F+ + G ++WNAMI GF Q++ +A +LF M + +
Sbjct: 262 ITTYAKCKRADLAAQVFNEL---GNKKTRISWNAMILGFTQNECPEDAERLFARMQLENV 318
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+P++ T+ V+ A R IH R L DV+ +ALIDMYSKCG + AR
Sbjct: 319 RPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARR 378
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
LF+ R ++V +WNAMI YG HG +++ELFE M G NE T +SVL+ACSH GL
Sbjct: 379 LFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGL 438
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V++G + F SMK+ YG++ EHY +VD+L R+G++ EA+ ++ +P+ S+ GA
Sbjct: 439 VDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAML 498
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
C +H +LA + FE+G + V+L+NI A W + +R M++K +QK
Sbjct: 499 GACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQK 558
Query: 521 QPGFSRVEKRNE 532
PG+S ++ +NE
Sbjct: 559 TPGWSIIQLKNE 570
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/460 (28%), Positives = 196/460 (42%), Gaps = 68/460 (14%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
TF+ +LK C D+ G+ VHA G ++ AL +MY KC ARRVF M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE--GLEPNQFTY--------------- 217
RD V+W ++++GY A+ RM+ E G P+ T
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
A++ +Y + G AA A F M V + V+WNAMI
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMP----VRNSVSWNAMID 193
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
G+A + EA+ LF M+ G+ + +V LQA G G + R +H L+ R+GL
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253
Query: 318 DVFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+V +ALI Y+KC A +F E+ K SWNAMI + ++ + + LF RM
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH--------YACVV 428
E +R + TL+SV+ A + +I ++ R+ S H ++
Sbjct: 314 QLENVRPDSFTLVSVIPAVA---------DISDPLQARWIHGYSIRHQLDQDVYVLTALI 364
Query: 429 DMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMG-L 484
DM + GR+ A +D R + N+M +G HG AV + EE G L
Sbjct: 365 DMYSKCGRVSIARRLFDSARDRHVITWNAMI----HGYGSHGFGQAAVELFEEMKGTGSL 420
Query: 485 RKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
F+ + C+ G E + MK K+ +PG
Sbjct: 421 PNETTFLSVLAACSHAGLVDEGQKYFASMK-KDYGLEPGM 459
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 284/552 (51%), Gaps = 48/552 (8%)
Query: 25 KSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
K L +GKQ+HA L + SL+++++ VY C + A+ +F+++P NV N
Sbjct: 72 KKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNI 131
Query: 84 MVMASAFTGNFQEAIG------YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
M+ AS + E+ G YF M + + TF+ ++ C DI+ G Q+H
Sbjct: 132 MIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHC 191
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
++GF+ D VG AL+ +Y+KCG + +ARRVF + RD+V W M+S Y S +E
Sbjct: 192 FTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEE 251
Query: 198 AVVLFERMKLEGLEPNQFTYN-------------------------------------AI 220
A +F M+L+ + ++FT++ A+
Sbjct: 252 AFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASAL 311
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I YA+ + A F M+ + ++V WN MI GF NE +KL K ML G
Sbjct: 312 INMYAKSENIIDARRVFDEMS----IRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGF 367
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P+ +T++ ++ + G +I ++HA ++ + ++LI YSKCGS+ A
Sbjct: 368 LPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFK 427
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
FE+T ++ +W ++I Y HG+ + S E+FE+ML G++ + + + VLSAC+H GL
Sbjct: 428 CFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGL 487
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V KGL F+ M Y + EHY C+VD+L R G + EA+++LR +P+ V + GAF
Sbjct: 488 VTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFI 547
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
C +H +LA E+ F + K + ++SNI A+ W++ E +RK M++K K
Sbjct: 548 GSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDAK 607
Query: 521 QPGFSRVEKRNE 532
PG S +E N+
Sbjct: 608 VPGCSWIEIGNQ 619
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 282 PNNVTV--TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
PN V + + L+ G + G+++HA + + G + + ++ +Y KC +DA+
Sbjct: 56 PNTVHLFCSNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAK 115
Query: 340 TLFEITRIKNVASWNAMI-GCYGKHGMVDSS-----IELFERMLEEGMRANEVTLISVLS 393
LFE ++NV SWN MI G++ +SS F RML E M + +T ++
Sbjct: 116 KLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLIC 175
Query: 394 ACSHGGLVEKGLEI 407
C+ +E G+++
Sbjct: 176 LCTQFNDIEMGVQL 189
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 285/549 (51%), Gaps = 43/549 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCT--NDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPN 75
LL C + QVHA D N+F ++ + L+ Y ++ A ++F++I +
Sbjct: 147 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILD 206
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+ N ++ G + EAI F MR+ ++ + FTFS VLKA VGL D G+Q+
Sbjct: 207 KDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQL 266
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H ++ GF D SVGN ++ YSK + R +F+ M E D VS+ +IS Y +
Sbjct: 267 HGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQY 326
Query: 196 DEAVVLFERMKLEGLEPNQFTY-----------------------------------NAI 220
+E++ LF M+ G + F + N++
Sbjct: 327 EESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSL 386
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
+ YA+ + A F ++ V+W A+ISG+ Q LKLF M + +
Sbjct: 387 VDMYAKCEMFDEAELIFKSLSQRS----TVSWTALISGYVQKGLHGAGLKLFTKMRGANL 442
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+ + T VL+A S+ +G+++HA + R G +VF+GS L+DMY+KCGS+KDA
Sbjct: 443 RADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQ 502
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+FE +N SWNA+I Y +G +++I F +M++ G++ + V+++ VL ACSH G
Sbjct: 503 VFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGF 562
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
VE+G E F++M YG+ K+HYAC++D+L R+GR EA L+ ++P M +
Sbjct: 563 VEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 622
Query: 461 NGCNIHGRRDLAVTMGEEFFEM-GLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
N C I+ + LA E+ F M LR +V +SNI AA G+W +++K M+E+ ++
Sbjct: 623 NACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIK 682
Query: 520 KQPGFSRVE 528
K P +S VE
Sbjct: 683 KVPAYSWVE 691
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 129/514 (25%), Positives = 242/514 (47%), Gaps = 56/514 (10%)
Query: 29 LRQGKQVHALLCTNDL---NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
LR+G+ AL +++ N S + + G Y GD++SAR +FD +P+ V + W +
Sbjct: 55 LRRGQVSAALKVYDEMPHKNTVSTNTMISG-YVKMGDLSSARHLFDAMPDRTV--VTWTI 111
Query: 86 MASAFTGN--FQEAIGYFSLMREFIYRC---NKFTFSIVLKACVGLLDIKKGKQVHAVAT 140
+ + GN F EA F L R+ C + TF+ +L C + QVHA A
Sbjct: 112 LMGWYAGNNHFDEA---FKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAV 168
Query: 141 QMGFEND--VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
++GF+ + ++V N L+ Y + L A +F + ++D V++ ++I+GY EA
Sbjct: 169 KLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEA 228
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------SNAAFAF 236
+ LF +M+ G +P+ FT++ ++ + D N F
Sbjct: 229 IHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHF 288
Query: 237 FSRM-----TAEGF--VP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
+S+ T F +P D V++N +IS ++Q+++ E+L LF+ M G N
Sbjct: 289 YSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPF 348
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
+L S+Q+GR++H + G++L+DMY+KC +A +F+
Sbjct: 349 ATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQ 408
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
++ SW A+I Y + G+ + ++LF +M +RA++ T +VL A + + G ++
Sbjct: 409 RSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQL 468
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCN 464
+ R G + + +VDM + G + +A + ++P N++ A+ +
Sbjct: 469 -HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYAD--- 524
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+G + A+ + + GL +PD +L + A
Sbjct: 525 -NGDGEAAIGAFTKMIQSGL-QPDSVSILGVLIA 556
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 37/316 (11%)
Query: 128 DIKKGKQVHA---VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
D+ + QV A V +M +N VS N +I Y K G L SAR +F M +R VV+WT
Sbjct: 53 DLLRRGQVSAALKVYDEMPHKNTVST-NTMISGYVKMGDLSSARHLFDAMPDRTVVTWTI 111
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEG 244
++ Y + DEA LF +M P+ T+ ++ NA + G
Sbjct: 112 LMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLG 171
Query: 245 FVPDL---------------------------------VTWNAMISGFAQSKRENEALKL 271
F +L VT+N +I+G+ + EA+ L
Sbjct: 172 FDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHL 231
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F M SG KP++ T +GVL+A +G+++H L G D G+ ++ YSK
Sbjct: 232 FLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSK 291
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
+ + R LF + S+N +I Y + + S+ LF M G ++
Sbjct: 292 HDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATM 351
Query: 392 LSACSHGGLVEKGLEI 407
LS ++ ++ G ++
Sbjct: 352 LSIAANLSSLQVGRQV 367
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 136/324 (41%), Gaps = 54/324 (16%)
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
++V A + GF D N ++ + G + +A +V+ M ++ VS +MISGY +
Sbjct: 29 RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
+ A LF+ M + T+ ++ YA + AF F +M +PD VT+
Sbjct: 89 GDLSSARHLFDAMP----DRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTF 144
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
++ G N+A+ P N +G ++HA +
Sbjct: 145 TTLLPGC------NDAV------------PQNA----------------VG-QVHAFAVK 169
Query: 313 MGLHIDVFTG--SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
+G ++F + L+ Y + L A LFE K+ ++N +I Y K G+ +I
Sbjct: 170 LGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAI 229
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK--EHYACV- 427
LF +M + G + ++ T VL A GL F ++ +G+ ++ A V
Sbjct: 230 HLFLKMRQSGHKPSDFTFSGVLKAVV-------GLHDFALGQQLHGLSVTTGFSRDASVG 282
Query: 428 ---VDMLCRSGRMVEAYDLLRQVP 448
+ + R++E +L ++P
Sbjct: 283 NQILHFYSKHDRVLETRNLFNEMP 306
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/520 (32%), Positives = 278/520 (53%), Gaps = 41/520 (7%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+++ L+ +Y CG++ AR VFD + + N M+ G +EA+ F M
Sbjct: 160 VQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKG 219
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ T VL C L +++ G++VHA+ D+SV N+L+DMY+KCG + A+
Sbjct: 220 IEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQ 279
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
+F+ M +RDVVSWT+M++GY A++L + M+ E ++PN T
Sbjct: 280 MIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLY 339
Query: 218 ------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
A+I YA+ + N +F FS+ + + P WN
Sbjct: 340 SLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAP----WN 395
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
A+ISG + +A++LFK ML+ + PN+ T+ +L A +Q R +H + R
Sbjct: 396 AIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRS 455
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFE--ITRIKNVASWNAMIGCYGKHGMVDSSIE 371
G + + LID+YSKCGSL+ A +F + K++ +W+A+I YG HG +++I
Sbjct: 456 GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAIS 515
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LF++M++ G++ NE+T S+L ACSH GLV++GL +F+ M E + + +HY CV+D+L
Sbjct: 516 LFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLL 575
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
R+GR+ EAY+L+R + +++ GA C IH +L + FE+ +V
Sbjct: 576 GRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYV 635
Query: 492 MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+L+NI +A G W +AE++R +M ++K P S +E RN
Sbjct: 636 LLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRN 675
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 262/547 (47%), Gaps = 59/547 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS------LKSKLVGVYAGCGDVNSARLVFDK 72
LL +C K++ KQ+HA T L + S L S L YA CG AR +FD+
Sbjct: 24 LLQRCTSRKSIPNTKQIHAHTIT--LGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDE 81
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC-NKFTFSIVLKACVGLLDIKK 131
+ NP++F N M+ +G +A+G F M R + +T+ V+KAC L +
Sbjct: 82 LRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEM 141
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G +HA GF++D V N+L+ MY CG + ARRVF M ER +VSW +MI+GY
Sbjct: 142 GALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFK 201
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFT----------------------------------- 216
V EA+++F+ M +G+EP+ T
Sbjct: 202 NGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISV 261
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
+N+++ YA+ G+ + A F M D+V+W M++G+ + AL L + M
Sbjct: 262 WNSLLDMYAKCGNMDEAQMIFYEMDKR----DVVSWTTMMNGYILNGDARSALLLCQMMQ 317
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+KPN VT+ VL A S++ GR +H R L +V +ALIDMY+KC ++
Sbjct: 318 FESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVN 377
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
+ +F + A WNA+I +G+ +IELF++ML E + N+ TL S+L A
Sbjct: 378 LSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPA-- 435
Query: 397 HGGLVEKGLEIFRSMKE---RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
+ L + L+ R+M R G E ++D+ + G + A+++ +P +
Sbjct: 436 YAFLTD--LQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKD 493
Query: 454 SMA-GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLR 510
+ A G +HG + A+++ ++ + G+ KP+ F + + C+ G E L
Sbjct: 494 IITWSAIIAGYGMHGHGETAISLFDQMVQSGV-KPNEITFTSILHACSHAGLVDEGLGLF 552
Query: 511 KIMKEKN 517
K M E N
Sbjct: 553 KFMLEDN 559
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 208/447 (46%), Gaps = 50/447 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C K L G++VHAL+ +L S+ + L+ +YA CG+++ A+++F ++ +
Sbjct: 230 VLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRD 289
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V M+ G+ + A+ +M+ + N T + VL AC L +K G+ +H
Sbjct: 290 VVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHG 349
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
A + E++V V ALIDMY+KC + + RVF ++ W ++ISG + +
Sbjct: 350 WAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRK 409
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF------------ 245
A+ LF++M +E ++PN T N+++ +YA D A + GF
Sbjct: 410 AIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILID 469
Query: 246 -----------------VP----DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+P D++TW+A+I+G+ A+ LF M+ SG+KPN
Sbjct: 470 IYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNE 529
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVC---RMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+T T +L A G + G + + +M L D +T +ID+ + G L++A L
Sbjct: 530 ITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYT--CVIDLLGRAGRLEEAYEL 587
Query: 342 FEITRIK-NVASWNAMIGCYGKHGMVD----SSIELFERMLEEGMRANEVTLISVLSACS 396
+ N A W A++G H V+ ++ LFE LE G N V L ++ SA
Sbjct: 588 IRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFE--LEPGNTGNYVLLANIYSAVG 645
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEH 423
+ E R M G++ + H
Sbjct: 646 RW----RDAEHVRLMMNNIGLRKTPAH 668
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 176/535 (32%), Positives = 275/535 (51%), Gaps = 50/535 (9%)
Query: 20 LGKCMKSKALRQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C K R G+QVH L+ + + ++S LV +YA C AR VFD +P NV
Sbjct: 158 LSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNV 217
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
N ++ G EA+ F M + ++ T S V+ AC GL ++G+QVHA
Sbjct: 218 VSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAH 277
Query: 139 ATQMG-FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ +D+ + NAL+DMY+KCG AR +F M R +VS TS+++GY + V++
Sbjct: 278 MVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVED 337
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
A V+ FS+M + +++ WN +I+
Sbjct: 338 AQVV-----------------------------------FSQMVEK----NVIAWNVLIA 358
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
+AQ+ E EA++LF + I P + T VL A G +Q+G++ H V + G
Sbjct: 359 AYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRF 418
Query: 318 D------VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
D VF G++L+DMY K GS+ D +FE ++ SWNAMI Y ++G ++
Sbjct: 419 DFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALH 478
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LFERML + VT+I VLSAC H GLV++G F SM E +G+ S++HY C+VD+L
Sbjct: 479 LFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLL 538
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
R+G + EA +L+ +PM + + + C +H +L FE+ + +V
Sbjct: 539 GRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYV 598
Query: 492 MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFVEKEVQNESK 543
+LSN+ A G+W E +R+ MK++ V KQPG S +E K N F+ ++ ++ +
Sbjct: 599 LLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSWIEIGRKMNVFLARDKRHPCR 653
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 155/323 (47%), Gaps = 41/323 (12%)
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
++ + HA + + + N L+ Y++ G L ARRVF + R+ S+ +++S
Sbjct: 32 NLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLS 91
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA--FFSRMTAEGF 245
Y + + DEA LFE + +P+Q +YNA++A+ AR G +AA A F + M A+ F
Sbjct: 92 AYARLGRPDEARALFEAIP----DPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDF 147
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
V + ++ + +S A K + G +
Sbjct: 148 VLNAYSFASALSACAAEKDS-----------------------------------RTGEQ 172
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+H LV R DV SAL+DMY+KC +DAR +F+ +NV SWN++I CY ++G
Sbjct: 173 VHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGP 232
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
V ++ LF M+ G +EVTL SV+SAC+ +G ++ M + ++
Sbjct: 233 VGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNN 292
Query: 426 CVVDMLCRSGRMVEAYDLLRQVP 448
+VDM + GR EA + +P
Sbjct: 293 ALVDMYAKCGRTWEARCIFDSMP 315
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 150/329 (45%), Gaps = 45/329 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C A R+G+QVHA + C + L + LV +YA CG AR +FD +
Sbjct: 255 LSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSM 314
Query: 74 PN-------------------------------PNVFMLNWMVMASAFTGNFQEAIGYF- 101
P+ NV N ++ A A G +EAI F
Sbjct: 315 PSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFV 374
Query: 102 SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF------ENDVSVGNALI 155
L R+ I+ + +T+ VL AC + D++ G+Q H + GF E+DV VGN+L+
Sbjct: 375 QLKRDSIWPTH-YTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLV 433
Query: 156 DMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF 215
DMY K G + +VF M RD VSW +MI GY + +A+ LFERM P+
Sbjct: 434 DMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSV 493
Query: 216 TYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
T ++++ G + +F MT + G P + M+ ++ EA +L
Sbjct: 494 TMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIND 553
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
M ++P++V +L A L ++++G
Sbjct: 554 M---PMEPDSVLWASLLGACRLHKNVELG 579
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
LV+ ++ ++ + A L+G+ R HA + + + + F + L+ Y++ G L
Sbjct: 13 LVAHLRASSPLADLLRSAPNLSGA----RAAHARILKSPVAGETFLLNTLVSTYARLGRL 68
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+DAR +F+ ++N S+NA++ Y + G D + LFE
Sbjct: 69 RDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFE 107
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/520 (32%), Positives = 278/520 (53%), Gaps = 41/520 (7%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+++ L+ +Y CG++ AR VFD + + N M+ G +EA+ F M
Sbjct: 160 VQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKG 219
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ T VL C L +++ G++VHA+ D+SV N+L+DMY+KCG + A+
Sbjct: 220 IEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQ 279
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
+F+ M +RDVVSWT+M++GY A++L + M+ E ++PN T
Sbjct: 280 MIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLY 339
Query: 218 ------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
A+I YA+ + N +F FS+ + + P WN
Sbjct: 340 SLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAP----WN 395
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
A+ISG + +A++LFK ML+ + PN+ T+ +L A +Q R +H + R
Sbjct: 396 AIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRS 455
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFE--ITRIKNVASWNAMIGCYGKHGMVDSSIE 371
G + + LID+YSKCGSL+ A +F + K++ +W+A+I YG HG +++I
Sbjct: 456 GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAIS 515
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LF++M++ G++ NE+T S+L ACSH GLV++GL +F+ M E + + +HY CV+D+L
Sbjct: 516 LFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLL 575
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
R+GR+ EAY+L+R + +++ GA C IH +L + FE+ +V
Sbjct: 576 GRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYV 635
Query: 492 MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+L+NI +A G W +AE++R +M ++K P S +E RN
Sbjct: 636 LLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRN 675
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 262/547 (47%), Gaps = 59/547 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS------LKSKLVGVYAGCGDVNSARLVFDK 72
LL +C K++ KQ+HA T L + S L S L YA G AR +FD+
Sbjct: 24 LLQRCTSRKSIPNTKQIHAHTIT--LGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDE 81
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC-NKFTFSIVLKACVGLLDIKK 131
+ NP++F N M+ +G +A+G F M R + +T+ V+KAC L +
Sbjct: 82 LRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEM 141
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G +HA GF++D V N+L+ MY CG + ARRVF M ER +VSW +MI+GY
Sbjct: 142 GALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFK 201
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFT----------------------------------- 216
V EA+++F+ M +G+EP+ T
Sbjct: 202 NGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISV 261
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
+N+++ YA+ G+ + A F M D+V+W M++G+ + AL L + M
Sbjct: 262 WNSLLDMYAKCGNMDEAQMIFYEMDKR----DVVSWTTMMNGYILNGDARSALLLCQMMQ 317
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+KPN VT+ VL A S++ GR +H R L +V +ALIDMY+KC ++
Sbjct: 318 FESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVN 377
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
+ +F T + A WNA+I +G+ +IELF++ML E + N+ TL S+L A
Sbjct: 378 LSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPA-- 435
Query: 397 HGGLVEKGLEIFRSMKE---RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
+ L + L+ R+M R G E ++D+ + G + A+++ +P +
Sbjct: 436 YAFLTD--LQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKD 493
Query: 454 SMA-GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLR 510
+ A G +HG + A+++ ++ + G+ KP+ F + + C+ G E L
Sbjct: 494 IITWSAIIAGYGMHGHGETAISLFDQMVQSGV-KPNEITFTSILHACSHAGLVDEGLGLF 552
Query: 511 KIMKEKN 517
K M E N
Sbjct: 553 KFMLEDN 559
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 208/447 (46%), Gaps = 50/447 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C K L G++VHAL+ +L S+ + L+ +YA CG+++ A+++F ++ +
Sbjct: 230 VLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRD 289
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V M+ G+ + A+ +M+ + N T + VL AC L +K G+ +H
Sbjct: 290 VVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHG 349
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
A + E++V V ALIDMY+KC + + RVF ++ W ++ISG + +
Sbjct: 350 WAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRK 409
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF------------ 245
A+ LF++M +E ++PN T N+++ +YA D A + GF
Sbjct: 410 AIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILID 469
Query: 246 -----------------VP----DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+P D++TW+A+I+G+ A+ LF M+ SG+KPN
Sbjct: 470 IYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNE 529
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVC---RMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+T T +L A G + G + + +M L D +T +ID+ + G L++A L
Sbjct: 530 ITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYT--CVIDLLGRAGRLEEAYEL 587
Query: 342 FEITRIK-NVASWNAMIGCYGKHGMVD----SSIELFERMLEEGMRANEVTLISVLSACS 396
+ N A W A++G H V+ ++ LFE LE G N V L ++ SA
Sbjct: 588 IRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFE--LEPGNTGNYVLLANIYSAVG 645
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEH 423
+ E R M G++ + H
Sbjct: 646 RW----RDAEHVRLMMNNIGLRKTPAH 668
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 284/555 (51%), Gaps = 45/555 (8%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
+ +L C + L GKQ+HA + + S+ + L+ Y C V + R +FD++
Sbjct: 233 VSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV 292
Query: 75 NPNVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
N+ ++W M S + N EA+ F M ++ + F + VL +C +++G
Sbjct: 293 VKNI--ISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQG 350
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+QVHA + E+D V N LIDMY+K LL A++VF M E++V+S+ +MI GY +
Sbjct: 351 RQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQ 410
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTY----------------------------------- 217
K+ EA+ LF M++ P+ T+
Sbjct: 411 EKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAG 470
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
+A+I Y++ A F M + D+V WNAM G+ Q EALKL+ +
Sbjct: 471 SALIDVYSKCSYVKDARHVFEEMNEK----DIVVWNAMFFGYTQHLENEEALKLYSTLQF 526
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
S KPN T ++ A S++ G++ H + +MGL F +AL+DMY+KCGS+++
Sbjct: 527 SRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEE 586
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
AR +F + ++V WN+MI + +HG + ++ +F M++EG++ N VT ++VLSACSH
Sbjct: 587 ARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSH 646
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
G VE GL F SM +G+K EHYACVV +L RSG++ EA + + ++P+ +
Sbjct: 647 AGRVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWR 705
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
+ + C I G +L E + +++LSNI A+ G W + + +R M
Sbjct: 706 SLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSE 765
Query: 518 VQKQPGFSRVEKRNE 532
V K+PG S +E N+
Sbjct: 766 VVKEPGRSWIEVNNK 780
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 151/551 (27%), Positives = 269/551 (48%), Gaps = 61/551 (11%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C + + +G Q+H + + D +++ + + L+ Y+ G++ ARLVFD++
Sbjct: 132 LASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVY-VGTSLIDFYSKNGNIEEARLVFDQL 190
Query: 74 PNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+ W + + +T G ++ F+ MRE +++ S VL AC L ++
Sbjct: 191 SEKTA--VTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEG 248
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GKQ+HA + G E DVSV N LID Y+KC + + R++F M ++++SWT+MISGY
Sbjct: 249 GKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQ 308
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR-----GDSNAAFAFFSRMTAEGFV 246
S EA+ LF M G +P+ F +++ S R G A+ + + ++ FV
Sbjct: 309 NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFV 368
Query: 247 P--------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
+++++NAMI G++ ++ +EAL+LF M V
Sbjct: 369 KNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLF 428
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P+ +T +L ++++ ++IH L+ + G+ +D+F GSALID+YSKC +KDAR
Sbjct: 429 PPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARH 488
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+FE K++ WNAM Y +H + +++L+ + + NE T ++++A S+
Sbjct: 489 VFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLAS 548
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL-----RQVPMYVTNSM 455
+ G + F + + G+ +VDM + G + EA + R V + NSM
Sbjct: 549 LRHGQQ-FHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCW--NSM 605
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIM 513
HG + A+ M E + G+ +P+ FV + + C+ G + N
Sbjct: 606 ISTHAQ----HGEAEEALGMFREMMKEGI-QPNYVTFVAVLSACSHAGRVEDGLN----- 655
Query: 514 KEKNVQKQPGF 524
+ PGF
Sbjct: 656 ---HFNSMPGF 663
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 243/488 (49%), Gaps = 45/488 (9%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYF-SLMR 105
L + L+ V + V++AR+VFDK+P+ N ++ W M S ++ G +EA+ F L R
Sbjct: 64 LANILINVCSKSDRVDNARVVFDKMPHKN--LITWSSMVSMYSQQGYSEEALMVFVDLQR 121
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
+ N+F + V++AC L ++KG Q+H + GF+ DV VG +LID YSK G +
Sbjct: 122 KSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIE 181
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
AR VF + E+ V+WT++I+GY + ++ LF +M+ + P+++ ++++++ +
Sbjct: 182 EARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACS 241
Query: 226 ----------------RRGDS------NAAFAFFS---------RMTAEGFVPDLVTWNA 254
RRG N F++ ++ + V ++++W
Sbjct: 242 MLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTT 301
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MISG+ Q+ + EA+KLF M G KP+ T VL + G +++ GR++HA +
Sbjct: 302 MISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKAN 361
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L D F + LIDMY+K L DA+ +F++ +NV S+NAMI Y + ++ELF
Sbjct: 362 LESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFH 421
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
M + +T +S+L + +E +I + ++GV + + ++D+ +
Sbjct: 422 EMRVRLFPPSLLTFVSLLGVSASLFALELSKQI-HGLIIKFGVSLDLFAGSALIDVYSKC 480
Query: 435 GRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
+ +A ++ + + + V N+M + L T+ + +KP+ F
Sbjct: 481 SYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTL-----QFSRQKPNEFT 535
Query: 492 MLSNICAA 499
+ I AA
Sbjct: 536 FAALITAA 543
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 178/385 (46%), Gaps = 44/385 (11%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
R + F+ +L+ + I K +H G ++D + N LI++ SK + +AR
Sbjct: 24 RPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARV 83
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF-ERMKLEGLEPNQFTYNAIIASYARRG 228
VF M +++++W+SM+S Y +EA+++F + + G PN+F ++I + + G
Sbjct: 84 VFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLG 143
Query: 229 DSNAAFAFFSRMTAEGFVPDL-------------------------------VTWNAMIS 257
+ GF D+ VTW +I+
Sbjct: 144 VVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIA 203
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
G+ + R +L+LF M + + P+ V+ VL A + ++ G++IHA V R G +
Sbjct: 204 GYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM 263
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
DV + LID Y+KC +K R LF+ +KN+ SW MI Y ++ +++LF M
Sbjct: 264 DVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMN 323
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV----VDMLCR 433
G + + SVL++C +E+G ++ Y +K + E V +DM +
Sbjct: 324 RLGWKPDGFACTSVLTSCGSREALEQGRQV-----HAYTIKANLESDEFVKNGLIDMYAK 378
Query: 434 SGRMVEA---YDLLRQVPMYVTNSM 455
S +++A +D++ + + N+M
Sbjct: 379 SNLLIDAKKVFDVMAEQNVISYNAM 403
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 146/300 (48%), Gaps = 16/300 (5%)
Query: 200 VLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
++ ++ + GL+ + F N +I ++ + A F +M + +L+TW++M+S +
Sbjct: 48 IIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHK----NLITWSSMVSMY 103
Query: 260 AQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
+Q EAL +F + SG PN + V++A G ++ G ++H V R G D
Sbjct: 104 SQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQD 163
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
V+ G++LID YSK G++++AR +F+ K +W +I Y K G S+ELF +M E
Sbjct: 164 VYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRE 223
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
+ + + SVLSACS +E G +I + R G ++ ++D + R+
Sbjct: 224 TNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR-GTEMDVSVVNVLIDFYTKCNRVK 282
Query: 439 EAYDLLRQVP----MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
L Q+ + T ++G +N + A+ + E +G KPDGF S
Sbjct: 283 AGRKLFDQMVVKNIISWTTMISGYMQNSFDWE-----AMKLFGEMNRLGW-KPDGFACTS 336
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 17/250 (6%)
Query: 255 MISGFAQSKR---ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
M +G ++K EN L+ + ++P +LQ I + IH +
Sbjct: 1 MATGMQKTKDMEDENPCLQ------IPNLRPKRREFANLLQLSISRNPIIHYKIIHGQII 54
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
GL D F + LI++ SK + +AR +F+ KN+ +W++M+ Y + G + ++
Sbjct: 55 VSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALM 114
Query: 372 LF-ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
+F + + G NE L SV+ AC+ G+VEKG ++ R G ++D
Sbjct: 115 VFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQL-HGFVVRSGFDQDVYVGTSLIDF 173
Query: 431 LCRSGRMVEAYDLLRQVP--MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
++G + EA + Q+ VT + A C GR +++ + + E + PD
Sbjct: 174 YSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKC---GRSAVSLELFAQMRETNV-VPD 229
Query: 489 GFVMLSNICA 498
+V+ S + A
Sbjct: 230 RYVVSSVLSA 239
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/584 (29%), Positives = 293/584 (50%), Gaps = 82/584 (14%)
Query: 33 KQVHALLCTNDLNIFS-LKSKLVGVYA-GCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
K++HA L L+ L S ++ Y+ +++ A LVF++I P + + N M+ +
Sbjct: 34 KELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGLSQ 93
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
+ + EAI ++ M N T + KAC + DI G+++H A ++GFE+ + V
Sbjct: 94 SDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFV 153
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM----- 205
NALI MY+ CG L A+++F GM +RD+VSW ++I GY +K E + LF+ M
Sbjct: 154 SNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANI 213
Query: 206 ------------------------------KLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
K LE + + N +I Y RR + A
Sbjct: 214 KADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQG 273
Query: 236 FFSRMTAEGFVP---------------------------DLVTWNAMISGFAQSKRENEA 268
F RM V D+++W +MI+G++Q+ + ++A
Sbjct: 274 VFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDA 333
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
+KLF+ M+ + +KP+ VTV VL A G + +G +H + R G+ D++ G++LIDM
Sbjct: 334 VKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDM 393
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y KCG ++ A +F + K+ SW ++I +G +S+++LF +ML EG++ T
Sbjct: 394 YCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTF 453
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ +L AC+H GLV KGLE F SM+ +G+ + +HY CVVD+L RSG + +AY+ ++++P
Sbjct: 454 VGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMP 513
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
+ + + C +HG LA + E+ +V+LSN A W +A
Sbjct: 514 IVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMK 573
Query: 509 LRKIMKEKNVQK------------------QPGFSRVEKRNEFV 534
+R++M++ +VQK +PG +VE RN+F
Sbjct: 574 MRELMEDSDVQKPSGSSSIEVDGMVSNYSQEPGLLQVETRNDFT 617
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 20/231 (8%)
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS-LKDARTLFEITRIKNVASWNAMI 357
S +E+HA + R LH D F S +I YS + L A +F + WN MI
Sbjct: 29 STDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMI 88
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
+ +I ++ RM +G+ N +TLI + AC+ + G +I + +
Sbjct: 89 RGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKI-----HVHAL 143
Query: 418 KISKEHYACVVDMLC-------RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
K+ E Y V + L + G + +D + + N++ + + +
Sbjct: 144 KLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQ----YNKYK 199
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRKIMKEKNVQ 519
+ + + + K D M+ I C+ G+W A+++ K +KE N++
Sbjct: 200 EVLRLFDAMTAANI-KADAVTMVKIILACSHLGDWEFADSMVKYIKENNLE 249
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 175/551 (31%), Positives = 276/551 (50%), Gaps = 41/551 (7%)
Query: 29 LRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
L +GK++H AL D +I + + L+ +YA CG+ A+ +F + ++ + ++
Sbjct: 345 LEKGKEIHGCALQQRIDSDIL-VATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
A TG +EA+ F M+ + N+ T +L AC L +K GK +H + ++
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDS 463
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D+S G AL+ MY+KCG +A F+ M RD+V+W S+I+GY + A+ +F +++
Sbjct: 464 DLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLR 523
Query: 207 LEGLEPNQFTY-----------------------------------NAIIASYARRGDSN 231
L + P+ T NA+I YA+ G
Sbjct: 524 LSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLP 583
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
+A F++ F D VTWN +I+ + Q+ EA+ F M + PN+VT VL
Sbjct: 584 SAEFLFNKT---DFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVL 640
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A + + G HA + +MG + G++LIDMY+KCG L + LF K+
Sbjct: 641 PAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTV 700
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SWNAM+ Y HG D +I LF M E ++ + V+ +SVLSAC H GLVE+G +IF SM
Sbjct: 701 SWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSM 760
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
++Y +K EHYAC+VD+L R+G E ++ +P+ + GA C +H L
Sbjct: 761 SDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKL 820
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+ ++ R P FV+LS+I A G W +A R M + ++K PG S VE +N
Sbjct: 821 GEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKN 880
Query: 532 EFVEKEVQNES 542
+ V ++S
Sbjct: 881 KVHAFRVGDKS 891
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 244/500 (48%), Gaps = 44/500 (8%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
SV+ L+ G C K + + +H + D + ++ + L+ +Y+ CGDV+ AR VFD
Sbjct: 230 SVSLLNLFPGIC-KLSNIELCRSIHGYVFRRDFSS-AVSNGLIDLYSKCGDVDVARRVFD 287
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
++ + + M+ A G F E + F M+ R NK + A +D++K
Sbjct: 288 QMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEK 347
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GK++H A Q ++D+ V L+ MY+KCG A+++F G+ RD+V+W+++I+
Sbjct: 348 GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQ 407
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY---------------------------------- 217
+EA+ LF+ M+ + ++PN+ T
Sbjct: 408 TGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLST 467
Query: 218 -NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
A+++ YA+ G AA F+RM++ D+VTWN++I+G+AQ A+ +F +
Sbjct: 468 GTALVSMYAKCGFFTAALTTFNRMSSR----DIVTWNSLINGYAQIGDPYNAIDMFYKLR 523
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+S I P+ T+ GV+ A L + G IH L+ ++G D +ALIDMY+KCGSL
Sbjct: 524 LSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLP 583
Query: 337 DARTLFEITRI-KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
A LF T K+ +WN +I Y ++G +I F +M E N VT +SVL A
Sbjct: 584 SAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAA 643
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
++ +G+ F + + G + ++DM + G++ + L ++ T S
Sbjct: 644 AYLAAFREGMA-FHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSW 702
Query: 456 AGAFRNGCNIHGRRDLAVTM 475
A +G +HG D A+ +
Sbjct: 703 -NAMLSGYAVHGHGDRAIAL 721
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 210/430 (48%), Gaps = 42/430 (9%)
Query: 13 VNYLDC--LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
NYL LL C K L Q+HA + + + L+ +Y+ + AR VF
Sbjct: 30 TNYLHYPRLLSSC---KHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVF 86
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
D PNP+ + N M+ A + + EA+ + M E +K+TF+ VLKAC G L+++
Sbjct: 87 DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQ 146
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
+G H + G E DV +G L+DMYSK G L AR VF M +RDVV+W +MI+G
Sbjct: 147 EGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLS 206
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
EAV F M+L G+EP+ +
Sbjct: 207 QSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS 266
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
N +I Y++ GD + A F +M + D V+W M++G+A + E L+LF M +
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQ----DDVSWGTMMAGYAHNGCFVEVLELFDKMKL 322
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
++ N V+ A T ++ G+EIH + + D+ + L+ MY+KCG +
Sbjct: 323 GNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEK 382
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A+ LF + +++ +W+A+I + G + ++ LF+ M + M+ N VTL+S+L AC+
Sbjct: 383 AKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACAD 442
Query: 398 GGLVEKGLEI 407
L++ G I
Sbjct: 443 LSLLKLGKSI 452
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
P + WN+MI + +SK+ NEAL+++ M+ G++P+ T T VL+A ++Q G
Sbjct: 92 PSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWF 151
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H + R GL DVF G+ L+DMYSK G LK AR +F+ ++V +WNAMI +
Sbjct: 152 HGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDP 211
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
+++ F M G+ + V+L+++ G +E+ RS+ +G ++ +
Sbjct: 212 CEAVDFFRSMQLVGVEPSSVSLLNLFP----GICKLSNIELCRSI---HGYVFRRDFSSA 264
Query: 427 V----VDMLCRSGRMVEA---YD-LLRQVPMYVTNSMAGAFRNGC 463
V +D+ + G + A +D ++ Q + MAG NGC
Sbjct: 265 VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGC 309
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 305 EIHALVCRMGL-HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
+IHA + G H T LI++YS AR++F+ T + WN+MI Y +
Sbjct: 50 QIHAQIIVSGFKHHHSITH--LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRS 107
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
+ ++E++ M+E+G+ ++ T VL AC+ +++G+ F +R G++
Sbjct: 108 KQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV-WFHGEIDRRGLERDVFI 166
Query: 424 YACVVDMLCRSGRMVEAYDLLRQVP 448
A +VDM + G + A ++ ++P
Sbjct: 167 GAGLVDMYSKMGDLKRAREVFDKMP 191
>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
Length = 917
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/488 (33%), Positives = 268/488 (54%), Gaps = 40/488 (8%)
Query: 43 DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS 102
+L++F L S L+ +++ G+V AR +FD + + ++ M ++ + G+ +A+G
Sbjct: 436 ELDVF-LVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTR 494
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
LMR N FT L AC L + +GK +HA A + GF +VGNALI+MY+KCG
Sbjct: 495 LMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCG 554
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----- 217
L A RVFH +++VSW ++ + Y K EA+ LF+ M+LEGL+ ++ ++
Sbjct: 555 CLEEADRVFH-QCGKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLN 613
Query: 218 ---------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV 250
A++ Y + A FSRM D+V
Sbjct: 614 GCSSASEGRKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRME----FRDIV 669
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA--GGLTGSIQIGREIHA 308
+WNAMI+G A+ EA+++F+ M + G+ P+ ++ VL A G S++ R +
Sbjct: 670 SWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEK 729
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
L+ G D G+A++ M+ + G L +AR FE R ++ ASWN ++ + +HG V+
Sbjct: 730 LISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQ 789
Query: 369 SIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
+++LF RM +E R + +TL+SVLSACSHGGL+E+G F SM +G+ S+EHY CVV
Sbjct: 790 ALKLFRRMQQESSRPDSITLVSVLSACSHGGLIEEGYHHFTSMGREFGIAGSQEHYGCVV 849
Query: 429 DMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
D+L R+GR+ +A +LLR++P+ + + + C + G A +GE E+ R+P
Sbjct: 850 DLLARAGRLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRAKRVGERVMELDPRRPA 909
Query: 489 GFVMLSNI 496
+V+LS++
Sbjct: 910 AYVVLSSV 917
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 153/535 (28%), Positives = 254/535 (47%), Gaps = 60/535 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C L +GK +H + L N+ + + L+ +Y CG V AR VFDK+
Sbjct: 109 VLDGCSAIGDLSRGKLLHGFVLEAGLERNVM-VGTSLIKMYGKCGCVEDARRVFDKLALQ 167
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V M+M EA+ F MR N+ T++ + AC + + GK +H
Sbjct: 168 DVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIH 227
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ + GFE+DV V A+++MY KCG L AR VF M + VSW ++++
Sbjct: 228 SQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCV 287
Query: 197 EAVVLFERMKLEG-LEPNQFTY-----------------------------------NAI 220
EA+ F+RM+L+G + P++ T+ N I
Sbjct: 288 EALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCI 347
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
+ Y+ G + A AFFS M D ++WN +ISG AQ+ +EA+ LF+ ML GI
Sbjct: 348 MTMYSSCGRIDNAAAFFSTMVER----DAISWNTIISGHAQAGFCDEAVHLFRRMLAEGI 403
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P+ T ++ T +Q + + L+ G+ +DVF SALI+M+S+ G++++AR+
Sbjct: 404 TPDKFTFISIIDG---TARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARS 460
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
LF+ + +++ W ++I Y +HG D ++ M EG+ N+ TL++ L+AC+
Sbjct: 461 LFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTA 520
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV--PMYVTNSMAGA 458
+ +G I ER G S +++M + G + EA + Q + N++A A
Sbjct: 521 LSEGKLIHAHAIER-GFAASPAVGNALINMYAKCGCLEEADRVFHQCGKNLVSWNTIAAA 579
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLR--KPD--GFVMLSNICAADGEWHEAENL 509
+ +RD + F EM L K D FV + N C++ E + N+
Sbjct: 580 YV-------QRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSASEGRKIHNI 627
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 221/476 (46%), Gaps = 50/476 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LLG C K A+ +G+ VH+ + ++ L ++ + +Y CG V A VF + +P+
Sbjct: 8 LLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLDHPS 67
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
N ++ A A G FQ+A F M+ ++ TF VL C + D+ +GK +H
Sbjct: 68 QVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGKLLHG 127
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ G E +V VG +LI MY KCG + ARRVF + +DVVSWTSMI Y + E
Sbjct: 128 FVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVE 187
Query: 198 AVVLFERMKLEGLEPNQFTYN-----------------------------------AIIA 222
A+ LF RM+ G+ PN+ TY AI+
Sbjct: 188 ALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVN 247
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM-LVSGIK 281
Y + G A F RM P+ V+WNA+++ Q EAL F+ M L GI
Sbjct: 248 MYGKCGSLEDAREVFERMPH----PNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGIT 303
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ VT +L A ++ G +H + + G + G+ ++ MYS CG + +A
Sbjct: 304 PDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAF 363
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F ++ SWN +I + + G D ++ LF RML EG+ ++ T IS++ G
Sbjct: 364 FSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIID----GTAR 419
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL-----RQVPMYVT 452
+ +I + GV++ + +++M R G + EA L R + M+ +
Sbjct: 420 MQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTS 475
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 243/527 (46%), Gaps = 70/527 (13%)
Query: 19 LLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C L G+ +H L C D ++ + + ++ +Y+ CG +++A F +
Sbjct: 312 ILNACSSPATLTFGELLHECILQCGYDTHLI-VGNCIMTMYSSCGRIDNAAAFFSTMVER 370
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ N ++ A G EA+ F M +KFTF ++ G +++ K +
Sbjct: 371 DAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIID---GTARMQEAKILS 427
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ + G E DV + +ALI+M+S+ G + AR +F M +RD+V WTS+IS Y D
Sbjct: 428 ELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSD 487
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
+A+ M+LEGL N FT NA+I
Sbjct: 488 DALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVGNALI 547
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ G A F + +LV+WN + + + Q + EAL+LF+ M + G+K
Sbjct: 548 NMYAKCGCLEEADRVFHQCG-----KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLK 602
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+ V+ VL S GR+IH ++ G+ D +AL++MY+ SL +A +
Sbjct: 603 ADKVSFVTVLNG---CSSASEGRKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRI 659
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F +++ SWNAMI +HG+ +I++F+RM EG+ ++++ ++VL+A S G
Sbjct: 660 FSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFS--GSS 717
Query: 402 EKGLEIFRSMKERYGVKISKEHYA-------CVVDMLCRSGRMVE---AYDLLRQVPMYV 451
L+ R +++ IS + Y +V M RSGR+ E A++ +R+
Sbjct: 718 PSSLKQARLVEK----LISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAAS 773
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
N + A HG + A+ + + R PD ++S + A
Sbjct: 774 WNVIVTAHAQ----HGEVEQALKLFRRMQQESSR-PDSITLVSVLSA 815
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 197/442 (44%), Gaps = 46/442 (10%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
TF +L C I +G+ VH+ F D V NA I MY KCG + A VF +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------- 217
VSW S+++ + + +A +F+RMKL+GL P++ T+
Sbjct: 64 DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGK 123
Query: 218 ------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
++I Y + G A F ++ + D+V+W +MI +
Sbjct: 124 LLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLA----LQDVVSWTSMIMTY 179
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
Q R EAL+LF M SG+ PN +T + A S+ G+ IH+ V G DV
Sbjct: 180 VQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDV 239
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM-LE 378
A+++MY KCGSL+DAR +FE N SWNA++ +HG ++ F+RM L+
Sbjct: 240 VVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQ 299
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
G+ ++VT I++L+ACS + G E+ + G C++ M GR+
Sbjct: 300 GGITPDKVTFITILNACSSPATLTFG-ELLHECILQCGYDTHLIVGNCIMTMYSSCGRID 358
Query: 439 EAYDLLRQVPMYVTNSMA-GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
A M ++++ +G G D AV + G+ PD F +S I
Sbjct: 359 NAAAFFS--TMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGI-TPDKFTFIS-II 414
Query: 498 AADGEWHEAENLRKIMKEKNVQ 519
EA+ L ++M E V+
Sbjct: 415 DGTARMQEAKILSELMVESGVE 436
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/530 (31%), Positives = 279/530 (52%), Gaps = 33/530 (6%)
Query: 32 GKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
GK VH + + + + S VG+YA C A +FD++P +V N ++
Sbjct: 317 GKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQ 376
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
G ++A+ F M+ ++ + T + V+ +C LLD+++GK++H + GF D V
Sbjct: 377 DGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFV 436
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
+AL+DMY KCG L A+ VF + ++VVSW SMI+GY + LF RM EG+
Sbjct: 437 SSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGI 496
Query: 211 EPNQFTYNAIIASYARR-----GDSNAAFAFFSRMTAEGFV------------------- 246
P T ++I+ + +R G + +R+ A+ FV
Sbjct: 497 RPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAEN 556
Query: 247 -------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
++V+WN MISG+ + EAL +F M +G+KP+ +T T VL A
Sbjct: 557 VFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAV 616
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
++ G+EIH + L I+ AL+DMY+KCG++ +A +F ++ SW +MI
Sbjct: 617 LEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAA 676
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
YG HG +++LFE+M + + ++VT +++LSACSH GLV++G F M YG K
Sbjct: 677 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKP 736
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN-SMAGAFRNGCNIHGRRDLAVTMGEE 478
+ EHY+C++D+L R GR+ EAY++L++ P + + + C++H + DL +G
Sbjct: 737 AVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRL 796
Query: 479 FFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
E P +++LSN+ A+ +W E +R +KE ++K PG S +E
Sbjct: 797 LIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIE 846
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 161/520 (30%), Positives = 256/520 (49%), Gaps = 54/520 (10%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
L+ LLGK + K + G Q + LC + L+ +Y C SA+LVF I N
Sbjct: 209 LEELLGKLIHQKIVSLGLQNNITLCKS----------LINLYFSCHLFQSAKLVFQTIEN 258
Query: 76 PNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIY-RCNKFTFSIVLKACVGLLDIKKG 132
P L W + +A T NF E + F + F Y + + FT+ VLKAC GL + G
Sbjct: 259 PLDITL-WNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYG 317
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
K VH + GF DV V ++ + MY+KC + A ++F M ERDV SW ++IS Y
Sbjct: 318 KMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQD 377
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD---- 248
+ ++A+ LFE MK+ G +P+ T +I+S AR D + GF D
Sbjct: 378 GQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS 437
Query: 249 ---------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+V+WN+MI+G++ ++LF+ M GI+
Sbjct: 438 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIR 497
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P T++ +L A + ++Q+G+ IH + R + D+F S+LID+Y KCG++ A +
Sbjct: 498 PTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENV 557
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ NV SWN MI Y K G ++ +F M + G++ + +T SVL ACS ++
Sbjct: 558 FQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVL 617
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM--YVT-NSMAGA 458
EKG EI + E ++I++ ++DM + G + EA + Q+P +V+ SM A
Sbjct: 618 EKGKEIHNFIIES-KLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAA 676
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+ + HG+ A+ + E+ + KPD L+ + A
Sbjct: 677 YGS----HGQAFEALKLFEK-MQQSDAKPDKVTFLAILSA 711
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 177/333 (53%), Gaps = 11/333 (3%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLV 69
++ L +L C +S L+ GK +H + N + +IF + S L+ +Y CG++ SA V
Sbjct: 499 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIF-VNSSLIDLYFKCGNIGSAENV 557
Query: 70 FDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
F +P NV ++W VM S + G++ EA+ F+ MR+ + + TF+ VL AC L
Sbjct: 558 FQNMPKTNV--VSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLA 615
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
++KGK++H + E + V AL+DMY+KCG + A +F+ + ERD VSWTSMI+
Sbjct: 616 VLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIA 675
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFV 246
Y + + EA+ LFE+M+ +P++ T+ AI+++ + G + +F++M AE GF
Sbjct: 676 AYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFK 735
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
P + ++ +I + R EA ++ + I+ + ++ + A L + +G +I
Sbjct: 736 PAVEHYSCLIDLLGRVGRLREAYEILQR--TPDIREDVGLLSTLFSACHLHKKLDLGEQI 793
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
L+ D T L +MY+ + R
Sbjct: 794 GRLLIEKDPD-DPSTYIILSNMYASVKKWDEVR 825
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 183/510 (35%), Positives = 266/510 (52%), Gaps = 17/510 (3%)
Query: 26 SKALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCG-----DVNSARLVFDKIPNPNVF 79
+ +L KQ HAL L T L + LV YA S+ VFD + PNVF
Sbjct: 45 TTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVF 104
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
+ N M+ +AI + M R NK+T+ VLKAC + +G QVHA
Sbjct: 105 LWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHL 164
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF-ERDVVSWTSMISGYCNVSKVDEA 198
+ G D + ++ I MY+ G L ARR+ E D V W +MI GY +V+ A
Sbjct: 165 VKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAA 224
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
LFE M + T+NA+I+ ++R G A FF M D ++W+AMI G
Sbjct: 225 RELFEGMPDRSMIS---TWNAMISGFSRCGMVEVAREFFDEMKER----DEISWSAMIDG 277
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
+ Q EAL++F M I+P + VL A G++ GR IH R + +D
Sbjct: 278 YIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLD 337
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
G++L+DMY+KCG + A +FE K V+SWNAMIG HG + +I+LF +M
Sbjct: 338 GVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM-- 395
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
+ NE+T + VL+AC+HGGLV+KGL IF SM++ YGV+ EHY C+VD+L R+G +
Sbjct: 396 -DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLT 454
Query: 439 EAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
EA ++ +P T ++ GA C HG +L +G+ E+ + + +LSNI A
Sbjct: 455 EAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYA 514
Query: 499 ADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
G W E +RK+MKE+ ++ PG S ++
Sbjct: 515 KAGRWEEVGEVRKLMKERGIKTTPGTSIID 544
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 13/219 (5%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C AL QG+ +H N + + L + LV +YA CG ++ A VF+K+
Sbjct: 306 LPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS 365
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N V N M+ A G ++AI FS M IY N+ TF VL AC ++KG
Sbjct: 366 NKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD--IYP-NEITFVGVLNACAHGGLVQKGLT 422
Query: 135 V-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+ +++ + G E + ++D+ + GLL A +V + E W +++ G C
Sbjct: 423 IFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALL-GAC-- 479
Query: 193 SKVDEAVVLFERMK--LEGLEP-NQFTYNAIIASYARRG 228
+ V L ER+ L LEP N Y + YA+ G
Sbjct: 480 -RKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAG 517
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 281/517 (54%), Gaps = 43/517 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C + QG+Q+HA L ++ NI ++++LV +Y+ CG +N A+ +F+++
Sbjct: 485 LLTLCANQRNDNQGRQIHAHLIRANITKNII-VETELVHMYSECGRLNYAKEIFNRMAER 543
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N + N M+ G QEA+ F M+ + + F+ S +L +CV L D +KG+++H
Sbjct: 544 NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELH 603
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ E + + L+DMY+KCG + A +V+ ++DV+ M+S + N
Sbjct: 604 NFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVN----- 658
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
G +N A F +M + WN+++
Sbjct: 659 ------------------------------SGRANDAKNLFDQMEQR----NTALWNSIL 684
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG-L 315
+G+A + E+ F ML S I+ + +T+ ++ +++ G ++H+L+ + G +
Sbjct: 685 AGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFV 744
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+ V +AL+DMYSKCG++ ART+F+ KN+ SWNAMI Y KHG ++ L+E
Sbjct: 745 NCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEE 804
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M ++GM NEVT +++LSACSH GLVE+GL IF SM+E Y ++ EHY C+VD+L R+G
Sbjct: 805 MPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAG 864
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
R+ +A + + ++P+ S GA C +H D+ + FE+ + P +V++SN
Sbjct: 865 RLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSN 924
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
I AA G W E E++R++MK K V+K PG S +E +E
Sbjct: 925 IYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSE 961
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 159/590 (26%), Positives = 274/590 (46%), Gaps = 94/590 (15%)
Query: 32 GKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
GKQVH+ L C + F + + L+ +YA C D S VFD++ N N ++ A A
Sbjct: 295 GKQVHSKLIACGFKGDTF-VGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEA 353
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
G+F +A+ F M+E Y+ N+F +L A GL DI KG+++H + +D+
Sbjct: 354 QFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDII 413
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE- 208
+G+AL+DMYSKCG++ A +VF + ER+ VS+ ++++GY K +EA+ L+ M+ E
Sbjct: 414 LGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSED 473
Query: 209 GLEPNQFTYNAIIA-----------------------------------SYARRGDSNAA 233
G++P+QFT+ ++ Y+ G N A
Sbjct: 474 GIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYA 533
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
F+RM + +WN+MI G+ Q+ EAL+LFK M ++GIKP+ +++ +L +
Sbjct: 534 KEIFNRMAER----NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSS 589
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL------------------ 335
Q GRE+H + R + + L+DMY+KCGS+
Sbjct: 590 CVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILN 649
Query: 336 -------------KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
DA+ LF+ +N A WN+++ Y G+ S F MLE +
Sbjct: 650 NVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIE 709
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA-- 440
+ +T++++++ CS +E G ++ + ++ V S +VDM + G + +A
Sbjct: 710 YDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKART 769
Query: 441 -YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICA 498
+D + + N+M + HG A+ + EE + G+ + F+ + + C+
Sbjct: 770 VFDNMNGKNIVSWNAMISGYSK----HGCSKEALILYEEMPKKGMYPNEVTFLAILSACS 825
Query: 499 ADGEWHEAENLRKIMKEK-NVQKQPGF-----------SRVEKRNEFVEK 536
G E + M+E N++ + R+E EFVEK
Sbjct: 826 HTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEK 875
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 258/531 (48%), Gaps = 53/531 (9%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYA--GC-GD 62
P ++++ L+ C+ S + ++GK +H + +N N + L +K++ +YA GC D
Sbjct: 65 PASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDD 124
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
+ AR +F+++P N+ N M++A A ++ E + + MR +KFTF V+KA
Sbjct: 125 LCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKA 184
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C+ + D+ +Q+ + + G ++ VG AL+D Y++ G + A + VV+W
Sbjct: 185 CIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTW 244
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------- 217
++I+GY + +EA +F+RM G+ P+ FT+
Sbjct: 245 NAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIA 304
Query: 218 ----------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
NA+I YA+ D + F M + VTWN++IS AQ N+
Sbjct: 305 CGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER----NQVTWNSIISAEAQFGHFND 360
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
AL LF M SG K N + +L A I GRE+H + R L+ D+ GSAL+D
Sbjct: 361 ALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVD 420
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML-EEGMRANEV 386
MYSKCG +++A +F +N S+NA++ Y + G + ++EL+ M E+G++ ++
Sbjct: 421 MYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQF 480
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T ++L+ C++ +G +I + R + + +V M GR+ A ++ +
Sbjct: 481 TFTTLLTLCANQRNDNQGRQIHAHLI-RANITKNIIVETELVHMYSECGRLNYAKEIFNR 539
Query: 447 VP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
+ Y NSM ++ +G A+ + ++ G+ KPD F + S
Sbjct: 540 MAERNAYSWNSMIEGYQQ----NGETQEALRLFKQMQLNGI-KPDCFSLSS 585
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 178/504 (35%), Positives = 276/504 (54%), Gaps = 48/504 (9%)
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ +VF N ++ A +G+ EA+ FS MR+ + +F +KAC L DI G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
KQ H A G+++D+ V +ALI MYS CG L AR+VF + +RD+VSWTSMI GY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLN 155
Query: 193 SKVDEAVVLFE----------------------------RMKLEGLEPNQFTY------- 217
+AV LF+ R+ +GL + ++
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 218 ------NAIIASYARRGDSNAAFA--FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
N ++ +YA+ G+ A A F ++ + D V++N+++S +AQS NEA
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK----DRVSYNSIMSVYAQSGMSNEAF 271
Query: 270 KLFKGMLVSGIKP-NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
++F+ ++ + + N +T++ VL A +G+++IG+ IH V RMGL DV G+++IDM
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y KCG ++ AR F+ + KNV SW AMI YG HG ++ELF M++ G+R N +T
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+SVL+ACSH GL +G F +MK R+GV+ EHY C+VD+L R+G + +AYDL++++
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
M + + + C IH +LA FE+ +++LS+I A G W + E
Sbjct: 452 MKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVER 511
Query: 509 LRKIMKEKNVQKQPGFSRVEKRNE 532
+R IMK + + K PGFS +E E
Sbjct: 512 VRMIMKNRGLVKPPGFSLLELNGE 535
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 181/412 (43%), Gaps = 63/412 (15%)
Query: 18 CLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C + C + GKQ H A + +IF + S L+ +Y+ CG + AR VFD+IP
Sbjct: 81 CAIKACSSLFDIFSGKQTHQQAFVFGYQSDIF-VSSALIVMYSTCGKLEDARKVFDEIPK 139
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNK-----FTFSI----VLKACVGL 126
++ M+ GN +A+ SL ++ + N F S+ V+ AC +
Sbjct: 140 RDIVSWTSMIRGYDLNGNALDAV---SLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL--LCSARRVFHGMFERDVVSWTS 184
+ +H+ + GF+ VSVGN L+D Y+K G + AR++F + ++D VS+ S
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 185 MISGYCNVSKVDEAVVLFERMKLE------------------------------------ 208
++S Y +EA +F R+
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
GLE + +II Y + G A F RM + ++ +W AMI+G+ +A
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK----NVRSWTAMIAGYGMHGHAAKA 372
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTG-SIQIGREIHALVCRMGLHIDVFTGSALID 327
L+LF M+ SG++PN +T VL A G ++ R +A+ R G+ + ++D
Sbjct: 373 LELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVD 432
Query: 328 MYSKCGSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVD----SSIELFE 374
+ + G L+ A L + ++K + W++++ H V+ S LFE
Sbjct: 433 LLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFE 484
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 179/558 (32%), Positives = 282/558 (50%), Gaps = 45/558 (8%)
Query: 14 NY-LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFD 71
NY L ++ C K L+ G+ +H ++ L++ + LV +Y C ++ AR +FD
Sbjct: 30 NYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFD 89
Query: 72 KIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
K+ + ++ W VM + G E++ F MRE +K V+ AC L +
Sbjct: 90 KMQERD--LVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAM 147
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
K + + + F+ DV +G A+IDMY+KCG + SAR +F M E++V+SW++MI+ Y
Sbjct: 148 HKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAY 207
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYN------------------------------- 218
+ +A+ LF M G+ P++ T
Sbjct: 208 GYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDH 267
Query: 219 ----AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
A++ Y + + A F +M DLVTW MI G+A+ NE+L LF
Sbjct: 268 FVCAALVDMYGKCREIEDARFLFDKMPER----DLVTWTVMIGGYAECGNANESLVLFDK 323
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M G+ P+ V + V+ A G++ R I + R +DV G+A+IDM++KCG
Sbjct: 324 MREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGC 383
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
++ AR +F+ KNV SW+AMI YG HG +++LF ML G+ N++TL+S+L A
Sbjct: 384 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYA 443
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS 454
CSH GLVE+GL F M E Y V+ +HY CVVD+L R+GR+ EA L+ + +
Sbjct: 444 CSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEG 503
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMK 514
+ GAF C H LA E+ + P +++LSNI A G W + R +M
Sbjct: 504 LWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMS 563
Query: 515 EKNVQKQPGFSRVEKRNE 532
++ ++K PG++ +E N+
Sbjct: 564 QRRLKKIPGWTWIEVDNK 581
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 236/472 (50%), Gaps = 62/472 (13%)
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRC----NKFTFSIVLKACVGLLDIKKGKQVHAVA 139
MV A G++ G F RE I RC + +T V++AC L +++ G+ +H +
Sbjct: 1 MVGGFAKVGDYINCFGTF---RELI-RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIV 56
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
+ G + D V AL+DMY KC + AR +F M ERD+V+WT MI GY K +E++
Sbjct: 57 YKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESL 116
Query: 200 VLFERMKLEGLEPNQFTY-----------------------------------NAIIASY 224
VLFE+M+ EG+ P++ A+I Y
Sbjct: 117 VLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMY 176
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
A+ G +A F RM + ++++W+AMI+ + + +AL LF+ ML SG+ P+
Sbjct: 177 AKCGCVESAREIFDRMEEK----NVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDK 232
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
+T+ +L A ++Q+GR IH +V + GL +D F +AL+DMY KC ++DAR LF+
Sbjct: 233 ITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDK 292
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+++ +W MIG Y + G + S+ LF++M EEG+ ++V +++V+ AC+ G + K
Sbjct: 293 MPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKA 352
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSG---RMVEAYDLLRQVPMYVTNSMAGAFRN 461
I +R ++ ++DM + G E +D + + + ++M A+
Sbjct: 353 RTI-DDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAY-- 409
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRK---PDGFVMLSNICAADGEWHEAENLR 510
G + GR+ L + F M LR P+ ++S + A E LR
Sbjct: 410 GYHGQGRKAL------DLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLR 455
>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 273/518 (52%), Gaps = 1/518 (0%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
L L + +GKQ HAL + L + + L S L+ Y+ G V A LVF ++
Sbjct: 285 LSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEML 344
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ N +V G A+ +M+ R + T + ++ A ++K GK+
Sbjct: 345 EKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKE 404
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H+ + E+DV+V +++IDMY+KC L ARRVF +RD++ W ++++ Y
Sbjct: 405 GHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQGH 464
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
E + LF +M+LEGL PN ++N++I +G + A F M + G P+L+TW
Sbjct: 465 SGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQAKDTFMEMQSLGICPNLITWTT 524
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
+I G AQ+ +EA F+ M +GIKPN+++++ +L A S+ GR IH + R
Sbjct: 525 LICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHE 584
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L + +L++MY+KCGS+ A+ +F++ K + +NAMI Y HG ++ LF
Sbjct: 585 LSVSTPVLCSLVNMYAKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALSLFR 644
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
R+ EE ++ +E+T S+LSAC H GLV +GLE+F M + + EHY C+V +L RS
Sbjct: 645 RLKEECIKPDEITFTSILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRS 704
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
+ EA ++ +P + G+ C H +L + E ++ +V LS
Sbjct: 705 HNLDEALRIILGMPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALS 764
Query: 495 NICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
N AA G W EA +R +MKE+++ K PG S ++ N+
Sbjct: 765 NAYAATGMWDEASKVRGLMKERSLSKIPGHSLIQIGNK 802
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 214/428 (50%), Gaps = 34/428 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDKIPN 75
LL C+ +AL G+Q+H + N +I +++KLV Y+ C + A +F K+
Sbjct: 84 LLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQV 143
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
N F ++ + G QEA+ F M E+ + F I KA L I GK V
Sbjct: 144 QNEFSWAAIMGLKSRMGFNQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSV 203
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA +MG + V +L+DMY KCGL A++VF + E+++V+W SMI +
Sbjct: 204 HAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLN 263
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYA--------RRGDSNAAFA------------ 235
EAV F M++EG+ P Q T ++ +++ A ++G + A +
Sbjct: 264 AEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSL 323
Query: 236 --FFSRMT---------AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
F+S++ +E D VTWN ++SG+ + + AL L M ++ ++
Sbjct: 324 INFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDS 383
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
VT+ ++ A + ++++G+E H+ R L DV S++IDMY+KC L+ AR +F+
Sbjct: 384 VTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDA 443
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
T +++ WN ++ Y + G +++LF +M EG+ N ++ SV+ + G V++
Sbjct: 444 TAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQA 503
Query: 405 LEIFRSMK 412
+ F M+
Sbjct: 504 KDTFMEMQ 511
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 172/554 (31%), Positives = 289/554 (52%), Gaps = 42/554 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C + QG+++H L D + FS + LV +YA G + A VFD+I
Sbjct: 114 LSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANA-LVDMYAKVGILEDASSVFDEI 172
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P++ N ++ A+ M + N FT S LKAC G+ + G+
Sbjct: 173 AKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGR 232
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H+ +M +D +G LIDMYSKC + AR VF M ERD+++W ++ISG+
Sbjct: 233 QLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNE 292
Query: 194 KVDEAVVLFERMKLEGLEPNQ-----------------------------------FTYN 218
+ +EA LF M EG+ NQ + N
Sbjct: 293 EDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVN 352
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
++I +Y + G A +R+ E + DLV + ++++ +AQ + EAL+L+ M
Sbjct: 353 SLIDTYGKCGHVEDA----TRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDR 408
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
GIKP++ + +L A + + G+++H + + G D+F G++L++MY+KCGS++DA
Sbjct: 409 GIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDA 468
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
F ++ + SW+AMIG +HG +++LF++ML+ G+ N +TL+SVL AC+H
Sbjct: 469 SCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHA 528
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLV + F SMK +G++ +EHYAC++D+L R+G++ A +L+ ++P + GA
Sbjct: 529 GLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGA 588
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
IH DL E + K V+L+NI A+ G W + +R++MK+ V
Sbjct: 589 LLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKV 648
Query: 519 QKQPGFSRVEKRNE 532
+K+PG S +E +++
Sbjct: 649 KKEPGMSWLEVKDK 662
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 138/519 (26%), Positives = 249/519 (47%), Gaps = 45/519 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C +K L GKQVH ++ D + F + + LV +YA CG AR +FD IP+
Sbjct: 16 VLKACTVTKDLVLGKQVHGIVVVTGFDSDEF-VANSLVILYAKCGGFGDARSLFDAIPDR 74
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V N + + EA+ F M R N+F+ S ++ C GL D +G+++H
Sbjct: 75 SVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIH 134
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++G+++D NAL+DMY+K G+L A VF + + D+VSW ++I+G
Sbjct: 135 GYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHH 194
Query: 197 EAVVLFERMKLEGLEPNQFTYNA-----------------------------------II 221
A+ L M G+ PN FT ++ +I
Sbjct: 195 RALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLI 254
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y++ + A F M D++ WNA+ISG +Q++ + EA LF M GI
Sbjct: 255 DMYSKCNSMDDARLVFKLMPER----DMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIG 310
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
N T++ VL++ + + R+IHAL + G D + ++LID Y KCG ++DA +
Sbjct: 311 FNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRV 370
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
FE + I ++ + +++ Y + G + ++ L+ M + G++ + S+L+AC+
Sbjct: 371 FEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAY 430
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
E+G ++ + ++G +V+M + G + +A ++P+ S + A
Sbjct: 431 EQGKQVHVHIL-KFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWS-AMIG 488
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
G HG A+ + ++ ++G+ P+ ++S +CA +
Sbjct: 489 GLAQHGYGKEALQLFKQMLKVGV-PPNHITLVSVLCACN 526
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 217/441 (49%), Gaps = 50/441 (11%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
+CN+F F VLKAC D+ GKQVH + GF++D V N+L+ +Y+KCG AR
Sbjct: 7 KCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARS 66
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------ 217
+F + +R VVSW ++ S Y + EAV LF M L G+ PN+F+
Sbjct: 67 LFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLED 126
Query: 218 -----------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
NA++ YA+ G A + F + PD+V+WNA
Sbjct: 127 SVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAK----PDIVSWNA 182
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
+I+G + + AL+L + M SG+ PN T++ L+A ++GR++H+ + +M
Sbjct: 183 IIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMD 242
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+ D F G LIDMYSKC S+ DAR +F++ +++ +WNA+I + ++ + + LF
Sbjct: 243 MGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFP 302
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
M EG+ N+ TL +VL + + +I ++ + G + ++D +
Sbjct: 303 LMHTEGIGFNQTTLSTVLKSIAALQANYMCRQI-HALSLKSGFEFDNYVVNSLIDTYGKC 361
Query: 435 GRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
G + +A + + P + + S+ A+ G+ + A+ + E + G+ KPD FV
Sbjct: 362 GHVEDATRVFEESPIVDLVLFTSLVTAYAQD----GQGEEALRLYLEMQDRGI-KPDSFV 416
Query: 492 --MLSNICAADGEWHEAENLR 510
L N CA+ + + + +
Sbjct: 417 CSSLLNACASLSAYEQGKQVH 437
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 161/344 (46%), Gaps = 15/344 (4%)
Query: 5 IFPI-NNLSVNYLDCLLGKCMKSKALRQG----KQVHALLCTNDLNIFS-LKSKLVGVYA 58
+FP+ + + + L +KS A Q +Q+HAL + + + + L+ Y
Sbjct: 300 LFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYG 359
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI 118
CG V A VF++ P ++ + +V A A G +EA+ + M++ + + F S
Sbjct: 360 KCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSS 419
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+L AC L ++GKQVH + GF +D+ GN+L++MY+KCG + A F + R
Sbjct: 420 LLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRG 479
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
+VSW++MI G EA+ LF++M G+ PN T +++ + G A +F+
Sbjct: 480 IVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFN 539
Query: 239 RMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
M G P + MI ++ + A++L M + N + +L A +
Sbjct: 540 SMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKM---PFQANALVWGALLGAARIH 596
Query: 298 GSIQIGREIHALVCRM-----GLHIDVFTGSALIDMYSKCGSLK 336
+I +G + ++ + G H+ + A + M+ K ++
Sbjct: 597 KNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVR 640
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 119/237 (50%), Gaps = 23/237 (9%)
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M + GIK N VL+A +T + +G+++H +V G D F ++L+ +Y+KCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
DAR+LF+ ++V SWNA+ CY M ++ LF M+ G+R NE +L S+++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 395 CSHGGLVEKGLEIFRSMKER----YGVKISKEHYA----CVVDMLCRSGRMVEAYDLLRQ 446
C+ GLE S++ R Y +K+ + A +VDM + G + +A + +
Sbjct: 121 CT-------GLE--DSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDE 171
Query: 447 V--PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
+ P V+ A GC +H A+ + E + G+ P+ F + S + A G
Sbjct: 172 IAKPDIVS---WNAIIAGCVLHEYHHRALELLREMNKSGM-CPNMFTLSSALKACAG 224
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 169/530 (31%), Positives = 279/530 (52%), Gaps = 33/530 (6%)
Query: 32 GKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
GK VH + + + + S VG+YA C A +FD++P +V N ++
Sbjct: 125 GKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQ 184
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
G ++A+ F M+ ++ + T + V+ +C LLD+++GK++H + GF D V
Sbjct: 185 DGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFV 244
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
+AL+DMY KCG L A+ VF + ++VVSW SMI+GY + LF RM EG+
Sbjct: 245 SSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGI 304
Query: 211 EPNQFTYNAIIASYARR-----GDSNAAFAFFSRMTAEGFV------------------- 246
P T ++I+ + +R G + +R+ A+ FV
Sbjct: 305 RPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAEN 364
Query: 247 -------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
++V+WN MISG+ + EAL +F M +G+KP+ +T T VL A
Sbjct: 365 VFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAV 424
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
++ G+EIH + L I+ AL+DMY+KCG++ +A +F ++ SW +MI
Sbjct: 425 LEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAA 484
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
YG HG +++LFE+M + + ++VT +++LSACSH GLV++G F M YG K
Sbjct: 485 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKP 544
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN-SMAGAFRNGCNIHGRRDLAVTMGEE 478
+ EHY+C++D+L R GR+ EAY++L++ P + + + C++H + DL +G
Sbjct: 545 AVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRL 604
Query: 479 FFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
E P +++LSN+ A+ +W E +R +KE ++K PG S +E
Sbjct: 605 LIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIE 654
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 260/518 (50%), Gaps = 45/518 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C+ SK L+QGK +H + + L N +L L+ +Y C SA+LVF I NP
Sbjct: 9 LLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL 68
Query: 78 VFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIY-RCNKFTFSIVLKACVGLLDIKKGKQ 134
L W + +A T NF E + F + F Y + + FT+ VLKAC GL + GK
Sbjct: 69 DITL-WNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKM 127
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + GF DV V ++ + MY+KC + A ++F M ERDV SW ++IS Y +
Sbjct: 128 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 187
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD------ 248
++A+ LFE MK+ G +P+ T +I+S AR D + GF D
Sbjct: 188 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSA 247
Query: 249 -------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+V+WN+MI+G++ ++LF+ M GI+P
Sbjct: 248 LVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPT 307
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
T++ +L A + ++Q+G+ IH + R + D+F S+LID+Y KCG++ A +F+
Sbjct: 308 LTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQ 367
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
NV SWN MI Y K G ++ +F M + G++ + +T SVL ACS ++EK
Sbjct: 368 NMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEK 427
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM--YVT-NSMAGAFR 460
G EI + E ++I++ ++DM + G + EA + Q+P +V+ SM A+
Sbjct: 428 GKEIHNFIIES-KLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYG 486
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+ HG+ A+ + E+ + KPD L+ + A
Sbjct: 487 S----HGQAFEALKLFEK-MQQSDAKPDKVTFLAILSA 519
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 177/333 (53%), Gaps = 11/333 (3%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLV 69
++ L +L C +S L+ GK +H + N + +IF + S L+ +Y CG++ SA V
Sbjct: 307 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIF-VNSSLIDLYFKCGNIGSAENV 365
Query: 70 FDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
F +P NV ++W VM S + G++ EA+ F+ MR+ + + TF+ VL AC L
Sbjct: 366 FQNMPKTNV--VSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLA 423
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
++KGK++H + E + V AL+DMY+KCG + A +F+ + ERD VSWTSMI+
Sbjct: 424 VLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIA 483
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFV 246
Y + + EA+ LFE+M+ +P++ T+ AI+++ + G + +F++M AE GF
Sbjct: 484 AYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFK 543
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
P + ++ +I + R EA ++ + I+ + ++ + A L + +G +I
Sbjct: 544 PAVEHYSCLIDLLGRVGRLREAYEILQR--TPDIREDVGLLSTLFSACHLHKKLDLGEQI 601
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
L+ D T L +MY+ + R
Sbjct: 602 GRLLIEKDPD-DPSTYIILSNMYASVKKWDEVR 633
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 171/515 (33%), Positives = 274/515 (53%), Gaps = 40/515 (7%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
L +KLV + G+V+ AR +FDK P+P+VF+ N +V + G F AI ++ M+
Sbjct: 109 LIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVAC 168
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ F+F VLKAC L ++ G++VH + GFE+DV V N L+ +Y+KCG + A
Sbjct: 169 VSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRAN 228
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS----- 223
VF + +R +VSWTS+ISGY + EA+ +F M+ + P+ +++ +
Sbjct: 229 AVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVE 288
Query: 224 ------------------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
YA+ G A FF+++ P L+ WN
Sbjct: 289 DLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVEN----PSLIFWN 344
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
AMISG+ ++ EA++LF+ M I+P+++TVT + A GS+++ R + +
Sbjct: 345 AMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMS 404
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
DV ++LID Y+KCGS+ AR +F+ K+V W+AM+ YG HG SI LF
Sbjct: 405 EFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILF 464
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
M + G+ N+VT + +L+AC + GLVE+G ++F M++ YG++ +HYACVVD+L R
Sbjct: 465 HAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRD-YGIEPRHQHYACVVDLLGR 523
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G + AY+ + +P+ S+ GA + C IH L E F + +V L
Sbjct: 524 AGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQL 583
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
SN+ A+ W +R +M+EK + K G+S +E
Sbjct: 584 SNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIE 618
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 180/389 (46%), Gaps = 47/389 (12%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C+L C AL G++VH + + + ++F +++ LV +YA CG++ A VF ++ +
Sbjct: 178 CVLKACSALPALEMGRRVHGQIFRHGFESDVF-VQNGLVALYAKCGEIVRANAVFGRLVD 236
Query: 76 PNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+ ++W + S + N Q EA+ FS MR+ R + VL+A + D++ GK
Sbjct: 237 RTI--VSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGK 294
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+H +MG E + + +L +Y+KCG + AR F+ + ++ W +MISGY
Sbjct: 295 SIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNG 354
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIA------------------------------- 222
+EA+ LF MK + + P+ T + IA
Sbjct: 355 YAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNT 414
Query: 223 ----SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+YA+ G + A F R+ + D+V W+AM+ G+ + E++ LF M +
Sbjct: 415 SLIDTYAKCGSVDMARFVFDRIPDK----DVVVWSAMMVGYGLHGQGRESIILFHAMRQA 470
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G+ PN+VT G+L A +G ++ G ++ + G+ + ++D+ + G L A
Sbjct: 471 GVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRA 530
Query: 339 RTLFEITRIK-NVASWNAMIGCYGKHGMV 366
I+ V+ W A++ H V
Sbjct: 531 YNFVMNMPIEPGVSVWGALLSACKIHRHV 559
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 186/552 (33%), Positives = 283/552 (51%), Gaps = 37/552 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL KSK Q Q+HA L T +L + F+ L V + +VN A LVF +I P
Sbjct: 14 LLSLLQKSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQP 73
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N F+ N MV + + A+ +++ MR + +T+ VLKAC + + +G V
Sbjct: 74 NSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQ 133
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + GF DV V N LI MY +CG AR VF G E+D+VSW SM+ GY +++
Sbjct: 134 GEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEME 193
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARR-GDSNAAFAFFSRMTAEGFVP-------- 247
A +F+ M E + +++ +I Y ++ G+ N A FF M V
Sbjct: 194 NAQNMFDEMP----ERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGY 249
Query: 248 -------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
++++W+ MI G+AQ + EAL LF+ ML GIKP+ V+V
Sbjct: 250 AKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVV 309
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
G + A G++ GR IH + R + +D+ +AL+DMY KCGS +AR +F +
Sbjct: 310 GAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPER 369
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
NV SWN MI G +G ++E F +M E + +++ + VL ACSH LV +GL IF
Sbjct: 370 NVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIF 429
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
MK Y ++ EHY C+VD+L R+G++ + ++++ +PM ++ G+ C IH
Sbjct: 430 NQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQN 489
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
LA + E E+ +V++SNI A G W +RK+MKE+ ++K G S +E
Sbjct: 490 VTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIE 549
Query: 529 ---KRNEFVEKE 537
EFV E
Sbjct: 550 VDGNVEEFVSGE 561
>gi|357516987|ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522804|gb|AET03258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1002
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 172/525 (32%), Positives = 286/525 (54%), Gaps = 10/525 (1%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L C +A+ +GKQ HAL+ + + L S ++ Y+ G + LVF +
Sbjct: 316 LSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMA 375
Query: 75 NPNVFM--LNWMVMASAFT--GNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDI 129
V + W +M S++ G F++A+ MRE R + T S +L D+
Sbjct: 376 ---VLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDV 432
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH-GMFERDVVSWTSMISG 188
K GK++H + F +D++V + ++DMY+KCG++ AR VFH ++D+V W +M++
Sbjct: 433 KLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAA 492
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
EA+ LF +M++E + PN ++N++I + R G A FS M G P+
Sbjct: 493 CAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPN 552
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
L+TW MISG AQ+ EA ++F+ M +G++PN++++T L A + GR IH
Sbjct: 553 LITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIHG 612
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
V R + + +++IDMY+KCG+L DA+ +F I K + +NAMI Y HG
Sbjct: 613 YVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKSAE 672
Query: 369 SIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
++ LF+ ++++G+ + +T SVLSACSHG L+++GLE+F+ M +K S++HY C+V
Sbjct: 673 ALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHYGCLV 732
Query: 429 DMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
+L G++ EA ++ +P + G+ C + +LA + + ++ P
Sbjct: 733 KLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHETELANYIAKWLLKVEPNNPG 792
Query: 489 GFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
+V LSN+ AA G+W E N+R MKEK ++K PG S +E E
Sbjct: 793 NYVALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCSWIEVGQEL 837
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 230/476 (48%), Gaps = 52/476 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALL-------CTNDLNIFSLKSKLVGVYAGCGDVNSARLVF- 70
LL C+ ++ L G Q+HA L TN+ ++SKLV +YA C A F
Sbjct: 109 LLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEF----VESKLVILYAKCNLTRVAVHFFR 164
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ + N N+F +V A G ++EA+ + M E + + F LKAC GL I
Sbjct: 165 NVVKNQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIG 224
Query: 131 KGKQVHAVATQMGFEND--VSVGNALIDMYSKCGLLCSARRVFHGMF--ERDVVSWTSMI 186
G+ +H +MG E D V V +L+DMY KCG+L A +VF M +R+ V W SMI
Sbjct: 225 FGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMI 284
Query: 187 SGYCNVSKVDEAVVLFERMKLE-GLEPNQFTYNAIIASYA--------RRGDS------- 230
GY EAV LFE+M+ E G+EP++ + + ++ A ++G +
Sbjct: 285 VGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGF 344
Query: 231 -------NAAFAFFSRM----------TAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
++ F+S++ + + D VTWN MIS + Q +AL++
Sbjct: 345 ELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCH 404
Query: 274 GML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
M ++ + VT++ +L T +++G+++H R + D+ S ++DMY+KC
Sbjct: 405 WMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKC 464
Query: 333 GSLKDARTLFEIT-RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
G + AR +F + K++ WN M+ + G+ +++LF +M E + N V+ S+
Sbjct: 465 GIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSL 524
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
+ G V + ++F M + GV + + ++ L ++G EA + +Q+
Sbjct: 525 IFGFFRNGQVVEAQDMFSEM-QLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQM 579
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 123/494 (24%), Positives = 217/494 (43%), Gaps = 89/494 (18%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNP--NVFMLNWMVMASAFTGNFQEAIGYFSLMR-EF 107
+ LV +Y CG + A VFD++PN N + N M++ G EA+G F MR E
Sbjct: 248 TSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEG 307
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
++ + S AC L +++GKQ HA+ MGFE + +G+++++ YSK GL+
Sbjct: 308 GVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEV 367
Query: 168 RRVFHGM-FERDVVSWTSMISGYCNVSKVDEAVVLFERMK-LEGLEPNQFTYNAIIASYA 225
VF M +D V+W MIS Y ++A+ + M+ E L + T ++++A A
Sbjct: 368 ELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAA 427
Query: 226 -----RRGDSNAAFA----FFSRMTA-----------------------EGFVPDLVTWN 253
+ G F F+S M G D+V WN
Sbjct: 428 DTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWN 487
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
M++ A+ EALKLF M + + PN
Sbjct: 488 TMLAACAEKGLSGEALKLFFQMQMESVPPN------------------------------ 517
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI----KNVASWNAMIGCYGKHGMVDSS 369
V + ++LI + + G + +A+ +F ++ N+ +W MI ++G+ +
Sbjct: 518 -----VVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEA 572
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+F++M GMR N +++ S LSAC++ L+ G I + + + S + ++D
Sbjct: 573 SRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNF-MSFSLQITTSIID 631
Query: 430 MLCRSGRMVEAYDLL-----RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
M + G + +A + +++P+Y N+M A+ + HG+ A+ + +E + G+
Sbjct: 632 MYAKCGNLDDAKFVFIICSTKELPVY--NAMISAYAS----HGKSAEALALFQELVKQGI 685
Query: 485 RKPDGFVMLSNICA 498
PD S + A
Sbjct: 686 M-PDHITFTSVLSA 698
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 295/552 (53%), Gaps = 37/552 (6%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLV 69
+ + L+ ++ C KS ++ G Q+H+ + D N++ + S LV +Y CG V+SA+ +
Sbjct: 78 TAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVY-ICSALVDMYGKCGAVSSAQRL 136
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
FD++P+ NV N ++ G + AI F M + F+ S VL C + D
Sbjct: 137 FDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDT 196
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
K G QVH ++ + GF ++ VG LID+YSK + ++R +F M ER++++WTSM++GY
Sbjct: 197 KLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGY 256
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP-- 247
+ + A+VL M+ G+ N TYN +++S++ D + R+ EG
Sbjct: 257 AHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNS 316
Query: 248 -------------------------------DLVTWNAMISGFAQSKRENEALKLFKGML 276
D ++WNA+I G + ALK F M
Sbjct: 317 YLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMR 376
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+GI + T T VL+A G+ ++ G++IHALV + G ++ + L+ MY++CGS+
Sbjct: 377 QAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSIN 436
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
DA+ +F + +V SWN+++ HG ++ELFE+M G++ + T + VLSAC
Sbjct: 437 DAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSACR 496
Query: 397 HGGLVEKGLEIFRSMKERYGVK-ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
H GL++KGLE F M+ Y ++ + EHY+ +VD+ R+G + EA D + +P+ S+
Sbjct: 497 HVGLLDKGLEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFINTMPIEPGPSV 556
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
A + C +HG ++AV ++ +M P +V+LSN+ A G W ++RK+M +
Sbjct: 557 YKALLSACQVHGNVEIAVRCAKKLLQMCPNDPVIYVLLSNVQATVGYWDNVASIRKVMCD 616
Query: 516 KNVQKQPGFSRV 527
+ V+K+PG+S +
Sbjct: 617 RGVRKEPGYSWI 628
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 110/217 (50%), Gaps = 8/217 (3%)
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
D + N+ I+ K+ + LKL + G P + ++ + +GS+ +G ++H
Sbjct: 43 DFFSCNSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLH 102
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+ + ++G +V+ SAL+DMY KCG++ A+ LF+ +NV +WN++I Y G +
Sbjct: 103 STIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPE 162
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYAC 426
+IELF M++ G+ ++ +VL C + G+++ SMK + I C
Sbjct: 163 IAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVG--TC 220
Query: 427 VVDMLCRSGRMVEA----YDLLRQVPMYVTNSMAGAF 459
++D+ + G ++A +DL+ + + SM +
Sbjct: 221 LIDLYSK-GWNIDASRLMFDLMPERNIITWTSMVAGY 256
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 176/545 (32%), Positives = 292/545 (53%), Gaps = 47/545 (8%)
Query: 23 CMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
C+++KA + G +H + TN NI L +KL+ Y+ GD SAR VFD++P V
Sbjct: 7 CIETKAKKPGHLIHNQILTNGFASNI-HLSTKLIIFYSKLGDTVSARKVFDRMPERTV-- 63
Query: 81 LNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
++W S ++ N +Q+A+ F M ++ N+FT+ VL+AC GL +++G Q+
Sbjct: 64 VSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGC 123
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ F +++ V +AL+D++SKCG + A +F M ERDVVSW ++I Y ++
Sbjct: 124 LEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDS 183
Query: 199 VVLFERMKLEGLEPNQFTYNAI-----------------------------------IAS 223
+F M EG+ P+ FT+ ++ I +
Sbjct: 184 FRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDA 243
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ-SKRENEALKLFKGMLVSGIKP 282
YA+ +A + M + D+++ A+++G+A+ S ++AL LFK + +K
Sbjct: 244 YAKCESLASAHCLYKSMP----MKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKI 299
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
++V + + S+ +GR+IHAL + DV G+ALIDMY+K G +KDA F
Sbjct: 300 DDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAF 359
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
KNV SW ++I YG HG +I LF++M EG++ N++T +S+L AC+H GL
Sbjct: 360 NEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTG 419
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G E F +M +Y + EH++C+VD+ R G + EAY+L+ ++ + S+ GA
Sbjct: 420 EGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGA 479
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C I+G LA F+M +V+L++I AA G W A +RK+M+E+N++K P
Sbjct: 480 CYIYGNMPLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAP 539
Query: 523 GFSRV 527
G+S +
Sbjct: 540 GYSFI 544
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 192/433 (44%), Gaps = 54/433 (12%)
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
L+ C+ K G +H GF +++ + LI YSK G SAR+VF M ER V
Sbjct: 4 LQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTV 63
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS---------------- 223
VSW++ ISGY +A+++F M G + NQFTY +++ +
Sbjct: 64 VSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGC 123
Query: 224 -------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
+++ G A F M D+V+WNA+I +A
Sbjct: 124 LEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEER----DVVSWNAIIGAYAVQGF 179
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
++ ++F+ M+ G+ P+ T VL+A G+ + +IH L+ ++G + +
Sbjct: 180 SGDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGS 239
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS-SIELFERMLEEGMRA 383
LID Y+KC SL A L++ +K++ S A++ Y + S +++LF+ + + M+
Sbjct: 240 LIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKI 299
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFR---SMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++V L S+ + C++ + G +I K Y V + ++DM +SG + +A
Sbjct: 300 DDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGN----ALIDMYAKSGEIKDA 355
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS-----N 495
++ S + G HG A+ + ++ GL KP+ LS N
Sbjct: 356 NRAFNEMEEKNVISWT-SLITGYGSHGHGHEAIALFKKMEYEGL-KPNDITFLSLLFACN 413
Query: 496 ICAADGEWHEAEN 508
C GE E N
Sbjct: 414 HCGLTGEGWECFN 426
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 178/509 (34%), Positives = 266/509 (52%), Gaps = 49/509 (9%)
Query: 29 LRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
++ G+Q HA + + L N F L +K+V +YA GD++SA +VFD+I NP+ + N ++
Sbjct: 93 IKLGQQAHAQIVLHGLQPNAF-LAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIR 151
Query: 87 ASAFTGNFQEA---IGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
A G + ++ M + FT VLK+C L + G+ VH ++G
Sbjct: 152 AYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVG 211
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
E D VG +LIDMY KCG++ AR++F M RD+ SW
Sbjct: 212 LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASW--------------------- 250
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
NA+IA Y + G+ A F RM ++V+W AMISG+ Q+
Sbjct: 251 --------------NALIAGYMKEGEIGVAEDLFERMEHR----NIVSWTAMISGYTQNG 292
Query: 264 RENEALKLFKGMLVSG--IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
+AL LF ML G +KPN VT+ VL A + +++ GR IH +GLH++
Sbjct: 293 FAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSV 352
Query: 322 GSALIDMYSKCGSLKDARTLFEITRI--KNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+AL MY+KC SL +AR F++ KN+ +WN MI Y HG ++ +FE ML
Sbjct: 353 QTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRA 412
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G++ + VT + +LS CSH GL++ GL F M + V+ EHYACVVD+L R+GR+VE
Sbjct: 413 GVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVE 472
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A +L+ Q+PM S+ GA C H ++A F + +V+LSN+ A
Sbjct: 473 AKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAE 532
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
G W E + LR ++K + ++K PG S +E
Sbjct: 533 AGMWEEVKKLRALLKYQGMKKSPGCSWIE 561
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 193/599 (32%), Positives = 297/599 (49%), Gaps = 76/599 (12%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLV 69
LS + +L C + + LR GK +H L+ + F L S L+ YA C ++ AR V
Sbjct: 96 LSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRV 155
Query: 70 FD-------------------------------KIPNPNVFMLNWMVMASAFTGNFQ--- 95
FD K+P +V + W + S F+ N
Sbjct: 156 FDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDV--VAWTTLISGFSKNGDGCG 213
Query: 96 EAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNAL 154
+A+ F LM R N+FTF V++AC L + G+ VH + + G E D S+G AL
Sbjct: 214 KALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGAL 273
Query: 155 IDMYSKC-------------------------------GLLCSARRVFHGMFERDVVSWT 183
++ Y +C G + A VF+GM E + VS+
Sbjct: 274 VEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYN 333
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE 243
MI GY ++D++ LFE+M + F+ N +I+ Y+R G+ + A F E
Sbjct: 334 LMIKGYAVGGQMDDSKRLFEKMPCRTI----FSSNTMISVYSRNGEIDKALELFEETKNE 389
Query: 244 GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
D VTWN+MISG+ S + EALKL+ M I+ T + + A GS+ G
Sbjct: 390 ---KDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQG 446
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
+ +HA + + +V+ G++LIDMYSKCGS+ +A+T F NVA+W A+I + H
Sbjct: 447 QLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYH 506
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
G+ +I LF+RM+E+G+ N T + VLSACS GLV +G++IF SM+ Y V + EH
Sbjct: 507 GLGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEH 566
Query: 424 YACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMG 483
YACVVD+L RSG + EA + ++++P+ + GA + C ++ + E+ F
Sbjct: 567 YACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFD 626
Query: 484 LRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
+ +V+LSNI A G W E +RKI++ V+K PG S +E N+ +++ S
Sbjct: 627 PKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRS 685
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 214/487 (43%), Gaps = 91/487 (18%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGV--YAGCGDVNSARLVFDKIPNPN 77
+ K K + L++ K L + N+ + S + + YA ++ AR +FD++P
Sbjct: 7 ISKAWKHQRLKEFK----LYTAHQSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRT 62
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V N M+ + + G F EA+ M + ++ TFS VL C L ++ GK +H
Sbjct: 63 VVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHC 122
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ + G E+ VG+AL+ Y+ C + ARRVF + R+ V W+ M+ GY + +D+
Sbjct: 123 LVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDD 182
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
A+ +F +M RR D+V W +IS
Sbjct: 183 ALSVFVKM-------------------PRR--------------------DVVAWTTLIS 203
Query: 258 GFAQSKRE-NEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
GF+++ +AL++F+ M+ SG PN T V++A G G + +GR +H L+ + GL
Sbjct: 204 GFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGL 263
Query: 316 HIDVFTGSALIDMYSKC-------------------------------GSLKDARTLFEI 344
D G AL++ Y +C G ++DA +F
Sbjct: 264 EYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNG 323
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
N S+N MI Y G +D S LFE+M + ++ T+ISV S G ++K
Sbjct: 324 MTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSN-TMISVY---SRNGEIDKA 379
Query: 405 LEIFRSMK-ERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFR 460
LE+F K E+ V + ++ SG+ EA Y + ++ + T S A
Sbjct: 380 LELFEETKNEKDPVT-----WNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALF 434
Query: 461 NGCNIHG 467
+ C+ G
Sbjct: 435 HACSCLG 441
>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 800
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 176/545 (32%), Positives = 287/545 (52%), Gaps = 44/545 (8%)
Query: 21 GKCMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
G C + LR K VH + + L LV +Y+ C D +SA +F + N ++
Sbjct: 208 GACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSI- 266
Query: 80 MLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+W M S + + F++A+ F M EF N T VL +C G +++GK VH
Sbjct: 267 -ASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHC 325
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
A + +D S+G ALI+ Y++ G L +V H + +R+++SW +IS Y + E
Sbjct: 326 YAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKE 385
Query: 198 AVVLFERMKLEGLEPN----------------------------------QFTYNAIIAS 223
A+ +F +M+ +G P+ +F N++I
Sbjct: 386 ALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILDEFVQNSLIDM 445
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
Y++ G + A+ F R+ ++ +V WN+MI GF+Q EA++LF M ++ + N
Sbjct: 446 YSKCGHVDLAYLIFDRIQSKS----VVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMN 501
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
VT +QA G ++ G+ +H + G+ D+F +ALIDMY+KCG L+ A +F+
Sbjct: 502 EVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFD 561
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
++V SW+AMIG G HG +D++I LF M++ M+ N++T +++LSACSH G VE+
Sbjct: 562 SMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEE 621
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
G F SMK + V+ + EH+AC+VD+L R+G + EAY ++ +P S+ GA NGC
Sbjct: 622 GKFYFNSMK-NFEVEPNLEHFACMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNGC 680
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
IH R D+ + + +M + +LSNI A +G W + +R MK ++K PG
Sbjct: 681 RIHQRMDMIRNIERDLLDMRTDDTGYYTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPG 740
Query: 524 FSRVE 528
+S +E
Sbjct: 741 YSTIE 745
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 145/561 (25%), Positives = 263/561 (46%), Gaps = 48/561 (8%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGC 60
N++I+ +S +L C L G++VH + L++ +++ L+G+Y
Sbjct: 88 NKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDL 147
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSI 118
G +++A+ VFD + + +++W + S + N + E + F L+ + T
Sbjct: 148 GCLSNAKKVFDNMTTRD--LVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLS 205
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+ AC L ++ K VH + E + +AL+ MYS+C SA R+F MF R
Sbjct: 206 IAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRS 265
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAA 233
+ SWT+MIS Y +A+ +F M + PN T A+++S A R G S
Sbjct: 266 IASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHC 325
Query: 234 FA-----------------FFSRMTAEGFVP---------DLVTWNAMISGFAQSKRENE 267
+A ++++ + ++++WN +IS +A E
Sbjct: 326 YAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKE 385
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
AL +F M G P++ +++ + A G + +G +IH + + +D F ++LID
Sbjct: 386 ALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHI-LDEFVQNSLID 444
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MYSKCG + A +F+ + K+V +WN+MI + + G +I LF++M + NEVT
Sbjct: 445 MYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVT 504
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLL 444
++ + ACSH G +EKG + + YGVK ++DM + G + A +D +
Sbjct: 505 FLTAIQACSHMGHLEKGKWLHHKLIA-YGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSM 563
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEW 503
+ + ++M G GC +HG D A+++ E + ++ D F+ + + C+ G
Sbjct: 564 SERSVVSWSAMIG----GCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYV 619
Query: 504 HEAENLRKIMKEKNVQKQPGF 524
E + M KN + +P
Sbjct: 620 EEGKFYFNSM--KNFEVEPNL 638
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 226/477 (47%), Gaps = 57/477 (11%)
Query: 28 ALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
+LR +H+ LL T + +KL+ Y+ G + S++LVF+ NP+ FM ++
Sbjct: 13 SLRPLTLLHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIK 72
Query: 87 ASAFTGNFQEAIGYFSLMREFIYR---CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
++ EAI SL + IY+ + F FS VL+AC G ++ G++VH + G
Sbjct: 73 CHVWSNFCGEAI---SLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYG 129
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
+ D V +L+ MY G L +A++VF M RD+VSW+S+IS Y + + E + +F
Sbjct: 130 LDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFR 189
Query: 204 RMKLEGLEPNQFTY-----------------------------------NAIIASYARRG 228
+ + +E + T +A++ Y+R
Sbjct: 190 LLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCD 249
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
D ++A FS M F + +W AMIS + +S+ +AL++F ML + PN VT+
Sbjct: 250 DFSSAERIFSNM----FNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIM 305
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDV---FTGSALIDMYSKCGSLKDARTLFEIT 345
VL + ++ G+ +H C HID+ G ALI+ Y++ G L +
Sbjct: 306 AVLSSCAGFNLLREGKSVH---CYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTI 362
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
+N+ SWN +I Y G+ ++ +F +M +G + +L S +SAC++ GL+ G
Sbjct: 363 GKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGH 422
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY---DLLRQVPMYVTNSMAGAF 459
+I +R+ + ++ ++DM + G + AY D ++ + NSM F
Sbjct: 423 QIHGYAIKRHILDEFVQN--SLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGF 477
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 185/552 (33%), Positives = 282/552 (51%), Gaps = 38/552 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L +L C + G +VH L D + FS + L+ +YA G +A VF +I
Sbjct: 191 LSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANA-LLDMYAKSGCPEAAIAVFYEI 249
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P P++ N ++ A+ M + + FT S LKAC + +K G+
Sbjct: 250 PKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGR 309
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H+ +M E D VG LIDMYSKCGLL AR VF M +DV+ W S+ISGY N
Sbjct: 310 QLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCG 369
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF-------AFFSRMTAEGFV 246
EA+ LF M EGLE NQ T + I+ S A G F + S +G+V
Sbjct: 370 YDIEAMSLFTNMYKEGLEFNQTTLSTILKSTA--GSQANGFCEQVHTISIKSGYQYDGYV 427
Query: 247 P--------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
DLV + +MI+ ++Q EALK++ M I
Sbjct: 428 ANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDI 487
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
KP+ + + A + + G++IH V + GL DVF G++L++MY+KCGS+ DA
Sbjct: 488 KPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASC 547
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F + + SW+AMIG +HG +++LF +ML+ G+ N +TL+SVLSAC+H GL
Sbjct: 548 IFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGL 607
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V + F M++ +G+ ++EHYAC+VD+L R GR+ EA L++++P + ++ GA
Sbjct: 608 VTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALL 667
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
IH +L E + K ++L+NI A+ G W +R+ MK V+K
Sbjct: 668 GAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKK 727
Query: 521 QPGFSRVEKRNE 532
+PG S +E +++
Sbjct: 728 EPGMSWIELKDK 739
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 182/367 (49%), Gaps = 36/367 (9%)
Query: 77 NVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFI---YRCNKFTFSIVLKACVGLLDIKK 131
N F + ++ + T N + + I +L+ E I N+F+ S VL AC GL D
Sbjct: 147 NEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENY 206
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G +VH ++G+++D NAL+DMY+K G +A VF+ + + D+VSW ++I+G
Sbjct: 207 GMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVL 266
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG-------------------DSNA 232
K D A+ L +M + P+ FT ++ + + A G DS
Sbjct: 267 HEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFV 326
Query: 233 AFAFFSRMTAEGFV------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
+ G + D++ WN++ISG++ + EA+ LF M G+
Sbjct: 327 GVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGL 386
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+ N T++ +L++ + + ++H + + G D + ++L+D Y KC L+DA
Sbjct: 387 EFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAK 446
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+FE+ +++ ++ +MI Y ++G+ + +++++ RM + ++ + S+ +AC++
Sbjct: 447 VFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSA 506
Query: 401 VEKGLEI 407
E+G +I
Sbjct: 507 YEQGKQI 513
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 192/477 (40%), Gaps = 121/477 (25%)
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D+ G +HA ++ + + N L+++YSKC AR++ E D+VSW+++IS
Sbjct: 65 DVSSGMAIHA---RIIRLGLLGLRNRLVNLYSKCQCFRVARKLVIDSSEPDLVSWSALIS 121
Query: 188 GYCNVSKVDEAVVLFERMKL---------------------------------------- 207
GY + +EA++ + M L
Sbjct: 122 GYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMIS 181
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
G+ PN+F+ + ++ + A D N + G+ D + NA++ +A+S
Sbjct: 182 TGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEA 241
Query: 268 ALKLFKGMLVSGIKPNNVTVTG-------------------------------VLQAGGL 296
A+ +F + I N + G L+A
Sbjct: 242 AIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAA 301
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
G +++GR++H+ + +M + D F G LIDMYSKCG L+DAR +F++ K+V WN++
Sbjct: 302 IGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSI 361
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGL 405
I Y G ++ LF M +EG+ N+ TL ++L + + H ++ G
Sbjct: 362 ISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGY 421
Query: 406 E----IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
+ + S+ + YG C+++ + + A DL+ M S G
Sbjct: 422 QYDGYVANSLLDSYG-------KCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYG---- 470
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLR------KPDGFVM--LSNICAADGEWHEAENLR 510
+GEE +M LR KPD F+ L N CA + + + +
Sbjct: 471 -------------LGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIH 514
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 190/611 (31%), Positives = 294/611 (48%), Gaps = 103/611 (16%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN--IFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C+KSK++ + + VHA + + IF ++++LV VY CG + AR VFD +
Sbjct: 25 LLDTCVKSKSVFEARLVHARIIKTQFSSEIF-IQNRLVDVYGKCGFLEDARKVFDHMQQR 83
Query: 77 NVFMLN-----------------------------WMVMASAFT--GNFQEAIGYFSLMR 105
N F N W M S F F+EA+ + M
Sbjct: 84 NTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMH 143
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
+ N+++F L AC GL+D+ G Q+H + + + DV +G+AL+DMYSKC ++
Sbjct: 144 SEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVA 203
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------- 217
SA+R F M R++VSW S+I+ Y +A+ +F RM G+EP++ T
Sbjct: 204 SAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACA 263
Query: 218 ----------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPD- 248
NA++ YA+ N A F RM V +
Sbjct: 264 SLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSET 323
Query: 249 --------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+V+WNA+I+G+ Q+ EA++LF + I P
Sbjct: 324 SMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWP 383
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI------DVFTGSALIDMYSKCGSLK 336
+ T +L A +++GR+ H + + G D+F G++LIDMY KCG ++
Sbjct: 384 THYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVE 443
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
D R +FE ++ SWNAMI Y ++G ++E+F ML G R + VT+I VLSACS
Sbjct: 444 DGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACS 503
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
H GLVE+G F+SM +G+ K+HY C+VD+L R+G + EA +L++ +PM +
Sbjct: 504 HAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVW 563
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
G+ C +HG L + E E+ +V+LSN+ A G W + +RK M++
Sbjct: 564 GSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQM 623
Query: 517 NVQKQPGFSRV 527
V KQPG S +
Sbjct: 624 GVIKQPGCSWI 634
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 166/336 (49%), Gaps = 43/336 (12%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
F+ +L CV + + + VHA + F +++ + N L+D+Y KCG L AR+VF M
Sbjct: 22 FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ 81
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
+R N F++NA++ + + G + A
Sbjct: 82 QR-----------------------------------NTFSWNAVLGALTKFGALDEALN 106
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F M D +WNAM+SGFAQ R EAL+ M N + L A
Sbjct: 107 LFKCMPER----DQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACA 162
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
+ IG +IH L+ + +DV+ GSAL+DMYSKC + A+ F+ ++N+ SWN+
Sbjct: 163 GLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNS 222
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMK-E 413
+I CY ++G ++E+F RM+ G+ +E+TL SV SAC+ + +GL+I R MK +
Sbjct: 223 LITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHD 282
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
+Y + + +VDM + R+ EA + ++P+
Sbjct: 283 KYRNDLVLGN--ALVDMYAKCRRVNEARLVFDRMPL 316
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 287/548 (52%), Gaps = 34/548 (6%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C++ C S+ + G+QVHA++ + ++F+ + LV +Y G V+ A ++F+K+P+
Sbjct: 114 CVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANA-LVDMYVKMGRVDIASVIFEKMPD 172
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V N ++ G+ AI M+ N F S +LKAC G G+Q+
Sbjct: 173 SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQI 232
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + ++D +G L+DMY+K L A +VF M RD++ W ++ISG + +
Sbjct: 233 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRH 292
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV--------- 246
DEA +F ++ EGL N+ T A++ S A ++A + GF+
Sbjct: 293 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 352
Query: 247 ----------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
D++ +MI+ +Q A+KLF ML G++P+
Sbjct: 353 IDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 412
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
++ +L A + + G+++HA + + D F G+AL+ Y+KCGS++DA F
Sbjct: 413 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 472
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+ V SW+AMIG +HG ++ELF RM++EG+ N +T+ SVL AC+H GLV++
Sbjct: 473 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 532
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
F SMKE +G+ ++EHY+C++D+L R+G++ +A +L+ +P S+ GA
Sbjct: 533 KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASR 592
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
+H +L E+ F + K V+L+N A+ G W+E +RK+MK+ N++K+P
Sbjct: 593 VHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAM 652
Query: 525 SRVEKRNE 532
S VE +++
Sbjct: 653 SWVEVKDK 660
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 156/538 (28%), Positives = 250/538 (46%), Gaps = 58/538 (10%)
Query: 22 KCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
KC+ L G QVHA+ ++F + + LV +Y G G ++ AR VFD+ +
Sbjct: 18 KCVPDAQL--GAQVHAMAMATGFGSDVF-VANALVAMYGGFGFMDDARRVFDEAGSERN- 73
Query: 80 MLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
++W + SA+ N Q +AI F M + +F FS V+ AC G +I G+QVHA
Sbjct: 74 AVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHA 133
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ +MG+E DV NAL+DMY K G + A +F M + DVVSW ++ISG C ++ D
Sbjct: 134 MVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISG-CVLNGHDH 192
Query: 198 -AVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
A+ L +MK GL PN F ++I+ +
Sbjct: 193 RAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 252
Query: 224 --YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ + A F M+ DL+ WNA+ISG + R +EA +F G+ G+
Sbjct: 253 DMYAKNHFLDDAMKVFDWMSHR----DLILWNALISGCSHGGRHDEAFSIFYGLRKEGLG 308
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
N T+ VL++ + R++HAL ++G D + LID Y KC L DA +
Sbjct: 309 VNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRV 368
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
FE ++ + +MI + + +I+LF ML +G+ + L S+L+AC+
Sbjct: 369 FEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAY 428
Query: 402 EKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
E+G ++ + +R + + +A +V + G + +A +P S + A
Sbjct: 429 EQGKQVHAHLIKR---QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWS-AM 484
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD--GEWHEAENLRKIMKE 515
G HG A+ + + G+ P+ M S +CA + G EA+ MKE
Sbjct: 485 IGGLAQHGHGKRALELFGRMVDEGI-NPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 541
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 171/554 (30%), Positives = 290/554 (52%), Gaps = 44/554 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C + + G+Q+HA + + + + ++ L+ +Y G + A VF +IP +
Sbjct: 266 VIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKD 325
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+++W M + + G EA+ F L+R+ Y+ N+F F V AC LL+++ GKQ
Sbjct: 326 --LISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQ 383
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + + G +V G +L DMY+K G L SA+ F + D+VSW ++I+ + +
Sbjct: 384 VHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGD 443
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
+EA+ F +M GL P+ TY N+
Sbjct: 444 ANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNS 503
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ Y + + A F ++ +LV+WNA++S Q K+E E +L+K M SG
Sbjct: 504 LLTMYTKCSHLHDALNVFRDISRNA---NLVSWNAILSACLQKKQEGETFRLYKEMHFSG 560
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
KP+++T+T +L S+ +G ++H + GL +DV + LIDMY+KCGSLK AR
Sbjct: 561 NKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHAR 620
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ T+ ++ SW+++I Y + G+ ++ LF M G++ NEVT + LSACSH G
Sbjct: 621 DVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIG 680
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVE+G +++SM+ +G+ ++EH++C+VD+L R+G + EA +++ + +
Sbjct: 681 LVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTL 740
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C H D+A ++ VML NI A+ G W E LRK+MK+ VQ
Sbjct: 741 LAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQ 800
Query: 520 KQPGFSRVEKRNEF 533
K PG S +E +++F
Sbjct: 801 KVPGQSWIEVKDKF 814
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 230/466 (49%), Gaps = 47/466 (10%)
Query: 19 LLGKCMKSKALRQGKQVH-ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ C ++L K++H +L +N L++ ++ +Y CG + AR VFD + PN
Sbjct: 165 LVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPN 224
Query: 78 VFMLNWMVMASAFTGNFQE---AIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
V ++W M S ++ N Q I Y + R + ++ TF V+KAC DI G+Q
Sbjct: 225 V--VSWTSMISGYSQNGQANDAIIMYIQMTRSGQFP-DQLTFGSVIKACYIAGDIDLGRQ 281
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+HA + F + ++ NALI MY+ G + A VF + +D++SW +MI+GY +
Sbjct: 282 LHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGY 341
Query: 195 VDEAVVLFERMKLEG-LEPNQFTYNAIIAS-------------------YARRGDSNAAF 234
EA+ LF + +G +PN+F + ++ ++ + R + A
Sbjct: 342 RVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGC 401
Query: 235 AFFSRMTAEGFV------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+ GF+ PD+V+WNA+I+ FA + NEA+ F+ M+ G+ P
Sbjct: 402 SLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTP 461
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+++T +L G + GR+IH+ + ++G ++ ++L+ MY+KC L DA +F
Sbjct: 462 DSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVF 521
Query: 343 -EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
+I+R N+ SWNA++ + + L++ M G + + +T+ ++L C+ +
Sbjct: 522 RDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSL 581
Query: 402 EKGLEIF-RSMKERYGVKISKEHYAC--VVDMLCRSGRMVEAYDLL 444
G ++ S+K + +S C ++DM + G + A D+
Sbjct: 582 GVGNQVHCYSIKSGLILDVS----VCNGLIDMYAKCGSLKHARDVF 623
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 179/373 (47%), Gaps = 49/373 (13%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
T++ ++ AC + K++H + ++ + + N +I+MY KCG + AR+VF M
Sbjct: 161 TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTM 220
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------- 217
+VVSWTSMISGY + ++A++++ +M G P+Q T+
Sbjct: 221 QLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGR 280
Query: 218 ------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
NA+I+ Y G A F+R+ + DL++W MI+G+
Sbjct: 281 QLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTK----DLISWGTMITGY 336
Query: 260 AQSKRENEALKLFKGMLVSGI-KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
Q EAL LF+ +L G +PN V A ++ G+++H + + GL +
Sbjct: 337 IQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRN 396
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
VF G +L DMY+K G L A+ F + ++ SWNA+I + +G + +I+ F +M+
Sbjct: 397 VFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIH 456
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI--SKEHYAC--VVDMLCRS 434
G+ + +T IS+L C + +G +I Y VKI KE C ++ M +
Sbjct: 457 IGLTPDSITYISLLCTCGSPVRLNQGRQI-----HSYIVKIGFDKEITVCNSLLTMYTKC 511
Query: 435 GRMVEAYDLLRQV 447
+ +A ++ R +
Sbjct: 512 SHLHDALNVFRDI 524
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 117/240 (48%), Gaps = 7/240 (2%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVF 70
S+ Y+ LL C L QG+Q+H+ + + ++ + L+ +Y C ++ A VF
Sbjct: 463 SITYIS-LLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVF 521
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNK---FTFSIVLKACVGLL 127
I N +++W + SA QE F L +E + NK T + +L C L
Sbjct: 522 RDISR-NANLVSWNAILSACLQKKQEG-ETFRLYKEMHFSGNKPDSITITTLLGTCAELT 579
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+ G QVH + + G DVSV N LIDMY+KCG L AR VF D+VSW+S+I
Sbjct: 580 SLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIV 639
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
GY EA+ LF M G++PN+ TY +++ + G + + M E +P
Sbjct: 640 GYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIP 699
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 170/552 (30%), Positives = 283/552 (51%), Gaps = 41/552 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L L C++S R G+++H ++ + F + S LV +YA GD+ +AR VFD++P
Sbjct: 126 LSLALKACVRSADFRYGRRLHCDVVKAGGADGFVMNS-LVDMYAKAGDLENARKVFDRVP 184
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NV M+ S G +E + F+ MR+ +++T VL AC L + +G+
Sbjct: 185 ERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRW 244
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + G + + +L+DMY+KC + ARRVF + D+V WT+MI GY +
Sbjct: 245 IHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKR 304
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
+A+ LF K + PN T NA
Sbjct: 305 PLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNA 364
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YA+ A + F R+ + D+V WN+M++G++++ NE+L LF M + G
Sbjct: 365 LVDMYAKCQALPEANSIFGRI----LIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQG 420
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I P+ ++V L A + IG+ H + +++ +AL+++YSKC L A+
Sbjct: 421 ISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQ 480
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F +N +W+AMIG YG G SI+LF ML+E + NEV S+LSACSH G
Sbjct: 481 RVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTG 540
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
+V G E F SM + + S +HYAC+VD++ R+G + EA + ++ +P+ S+ G+F
Sbjct: 541 MVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSF 600
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+GC +H R + ++ + PD +V++SN+ + G W +++ +R+ M+E+ +
Sbjct: 601 LHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGLV 660
Query: 520 KQPGFSRVEKRN 531
K PG S V N
Sbjct: 661 KLPGCSSVGHEN 672
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 218/417 (52%), Gaps = 48/417 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL C ++LR LL + L ++KL+ YA GD+ SAR V D P P+
Sbjct: 27 LLPACGTLRSLRALHGRLLLLTSGLLRGIRARTKLLSCYAALGDLASARGVLDGTPRPDA 86
Query: 79 F----MLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN-----KFTFSIVLKACVGLLDI 129
+ ML W+V A G+ +A+ +L R+ RC S+ LKACV D
Sbjct: 87 YAYRVMLGWLVDA----GSHADAV---ALHRDMRRRCPAAAQADVVLSLALKACVRSADF 139
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
+ G+++H + G D V N+L+DMY+K G L +AR+VF + ER+VVSWTSM+SG
Sbjct: 140 RYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGS 198
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA----------------RRGDSNAA 233
+E +VLF M+ + + P+++T +++A+ A + G S +
Sbjct: 199 IQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNS 258
Query: 234 FAFFS---------------RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
F S R+ E D+V W AMI G+ Q+KR +AL+LF
Sbjct: 259 FISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFV 318
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
I PN+VT+ V+ A + +GR +HA+ ++G +AL+DMY+KC +L +A
Sbjct: 319 SIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEA 378
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
++F IK+V +WN+M+ Y ++GM + S+ LF RM +G+ + +++++ LSAC
Sbjct: 379 NSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSAC 435
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 172/540 (31%), Positives = 282/540 (52%), Gaps = 41/540 (7%)
Query: 26 SKALRQ-GKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
S+AL + G Q+H L+ + + L + LV +Y+ G ++ A +F+ +P+ NV N
Sbjct: 85 SEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNG 144
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
M+ G EA FS M + TF+ L + +K+GK++H + G
Sbjct: 145 MIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHG 204
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
DV + +ALID+Y KC + A ++F D+V T++ISGY ++A+ +F
Sbjct: 205 IALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFR 264
Query: 204 RMKLEGLEPNQFTY-----------------------------------NAIIASYARRG 228
+ E + PN T +AI+ YA+ G
Sbjct: 265 WLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCG 324
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
+ A+ F RM + D V WNA+I+ +Q+ + EA+ LF+ M G+ + V+++
Sbjct: 325 RLDLAYQIFRRMPEK----DAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSIS 380
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
L A ++ G+ IH+ + + +VF SALIDMY KCG+L AR +F++ R K
Sbjct: 381 AALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREK 440
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
N SWN++I YG HG ++ S+ LF +MLE+G++ + VT +++LSAC H G V+KG++ F
Sbjct: 441 NEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYF 500
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
R M E YG+ EHYAC+VD+ R+GR+ EA++ ++ +P + + G C +HG
Sbjct: 501 RCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGN 560
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+LA ++ +V+LSN+ A G+W +R +MK++ VQK PG+S +E
Sbjct: 561 VELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIE 620
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 144/507 (28%), Positives = 243/507 (47%), Gaps = 52/507 (10%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
S L+ +YA G + AR +FDK+PN + + N M+ G A+ F MR +
Sbjct: 11 SSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTK 70
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N TF+ VL C + G Q+H + GF D V NAL+ MYSK G L A ++
Sbjct: 71 PNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKL 130
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------- 217
F+ M + +VV+W MI+G+ +DEA +LF M G+ P+ T+
Sbjct: 131 FNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASL 190
Query: 218 ----------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
+A+I Y + D A F + T D+V A+
Sbjct: 191 KQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNV----DIVVCTAI 246
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
ISG+ + N+AL++F+ +L + PN VT+ VL A ++ +G+E+HA + + GL
Sbjct: 247 ISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGL 306
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
GSA++DMY+KCG L A +F K+ WNA+I ++G +I+LF +
Sbjct: 307 DERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQ 366
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM-KERYGVKISKEHYACVVDMLCRS 434
M EG+ + V++ + LSAC++ + G I M K + ++ E + ++DM +
Sbjct: 367 MGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAE--SALIDMYGKC 424
Query: 435 GRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--G 489
G + A +D++R+ NS+ A+ + HG ++++ + + E G+ +PD
Sbjct: 425 GNLSVARCVFDMMREKNEVSWNSIIAAYGS----HGHLEVSLALFHKMLEDGI-QPDHVT 479
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEK 516
F+ + + C G+ + + M E+
Sbjct: 480 FLTILSACGHAGQVDKGIQYFRCMTEE 506
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 179/344 (52%), Gaps = 44/344 (12%)
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
MGF D VG++LI +Y++ G + ARR+F M +D V W M++G+ + + AV +
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 202 FERMKLEGLEPNQFTY-----------------------------------NAIIASYAR 226
FE M+ +PN T+ NA++A Y++
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120
Query: 227 RGDSNAAFAFFSRMTAEGFVPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
G + A F+ M PD +VTWN MI+GF Q+ +EA LF M+ +G+ P++
Sbjct: 121 FGQLSDALKLFNTM------PDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDS 174
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
+T L + + S++ G+EIH + R G+ +DVF SALID+Y KC + A +F+
Sbjct: 175 ITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQ 234
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+ ++ A+I Y +G+ + ++E+F +LEE M N VTL SVL AC+ + G
Sbjct: 235 STNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLG 294
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
E+ ++ ++G+ + + ++DM + GR+ AY + R++P
Sbjct: 295 KELHANIL-KHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMP 337
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 206/440 (46%), Gaps = 48/440 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L +S +L+QGK++H + + L++F LKS L+ +Y C DV A +F + N
Sbjct: 180 FLPSVTESASLKQGKEIHGYILRHGIALDVF-LKSALIDIYFKCRDVGMACKIFKQSTNV 238
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ + ++ G +A+ F + E N T + VL AC GL + GK++H
Sbjct: 239 DIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELH 298
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + G + VG+A++DMY+KCG L A ++F M E+D V W ++I+ K
Sbjct: 299 ANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQ 358
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAF----AFFSRMTAEGFVP 247
EA+ LF +M EGL + + +A +++ A G + +F AF S + AE +
Sbjct: 359 EAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALI 418
Query: 248 DL----------------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
D+ V+WN++I+ + +L LF ML GI+P++V
Sbjct: 419 DMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHV 478
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVC---RMGLHIDVFTGSALIDMYSKCGSLKDA-RTL 341
T +L A G G Q+ + I C G+ + + ++D++ + G L +A T+
Sbjct: 479 TFLTILSACGHAG--QVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETI 536
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE---VTLISVLSACSHG 398
+ + W ++G HG V+ + E+ R L + N V L +V +
Sbjct: 537 KNMPFSPDDGVWGTLLGACRVHGNVELA-EVASRCLLDLDPENSGCYVLLSNVHADAGQW 595
Query: 399 GLVEKGLEIFRSMKERYGVK 418
G V K RS+ ++ GV+
Sbjct: 596 GSVRK----IRSLMKKRGVQ 611
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 178/515 (34%), Positives = 274/515 (53%), Gaps = 47/515 (9%)
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTF 116
G GD+ SA VFD++P+ NV + W +M + F G ++A+ F M Y ++FT
Sbjct: 91 GNGDLESAYKVFDRMPDRNV--VTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTL 148
Query: 117 SIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC---GLLCSARRVFHG 173
S V+ AC + + G+Q H + + G + DV VG +L+DMY+KC G + AR+VF
Sbjct: 149 SGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDR 208
Query: 174 MFERDVVSWTSMISGYCNVSKVD-EAVVLFERMKLEGLEPNQFTY--------------- 217
M +V+SWT++I+GY D EA+ LF M ++PN FT+
Sbjct: 209 MPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWL 268
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
N++I+ Y+R G+ A F + F +LV++N +++
Sbjct: 269 GEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVL----FEKNLVSYNTIVN 324
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
+A+S EA +LF + +G N T +L G+I G +IH+ + + G
Sbjct: 325 AYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKS 384
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
++ +ALI MYS+CG+++ A +F NV SW +MI + KHG ++E F +ML
Sbjct: 385 NLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKML 444
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
E G+ NEVT I+VLSACSH GL+ +GL+ F+SMK +G+ EHYACVVD+L RSG +
Sbjct: 445 EAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHL 504
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
EA +L+ +P + F C +HG DL E E P +++LSN+
Sbjct: 505 EEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLH 564
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
A+ G+W E +RK MKE+N+ K+ G S +E N+
Sbjct: 565 ASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENK 599
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 207/407 (50%), Gaps = 40/407 (9%)
Query: 80 MLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+++W + S + N + EAI F M E + N++ F+ V +AC +I GK +
Sbjct: 7 LVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFG 66
Query: 138 VATQMG-FENDVSVGNALIDMYSKC-GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
+ G FE+DV VG ALIDM+ K G L SA +VF M +R+VV+WT MI+ + +
Sbjct: 67 FLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFS 126
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAF------------------- 236
+AV LF M L G P++FT + ++++ A G + F
Sbjct: 127 RDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSL 186
Query: 237 ---FSRMTAEGFVPD------------LVTWNAMISGFAQSKR-ENEALKLFKGMLVSGI 280
+++ A+G V D +++W A+I+G+ QS + EA++LF M+ +
Sbjct: 187 VDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQV 246
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
KPN+ T + VL+A I +G +++ALV +M L G++LI MYS+CG++++AR
Sbjct: 247 KPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARK 306
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
F++ KN+ S+N ++ Y K + + ELF + G N T S+LS S G
Sbjct: 307 AFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGA 366
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
+ KG +I S + G K + ++ M R G + A+ + ++
Sbjct: 367 IGKGEQI-HSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEM 412
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 163/339 (48%), Gaps = 61/339 (17%)
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR-------- 227
+RD+VSW+++IS Y N K EA+ F M G PN++ + + + + +
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 228 -----------------------------GDSNAAFAFFSRMTAEGFVPD--LVTWNAMI 256
GD +A+ F RM PD +VTW MI
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRM------PDRNVVTWTLMI 117
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+ F Q +A+ LF M++SG P+ T++GV+ A G + +GR+ H LV + GL
Sbjct: 118 TRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLD 177
Query: 317 IDVFTGSALIDMYSKC---GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD-SSIEL 372
+DV G +L+DMY+KC GS+ DAR +F+ + NV SW A+I Y + G D +IEL
Sbjct: 178 LDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIEL 237
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV----V 428
F M++ ++ N T SVL AC++ + G +++ + VK+ CV +
Sbjct: 238 FLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALV-----VKMRLASINCVGNSLI 292
Query: 429 DMLCRSGRMV---EAYDLLRQVPMYVTNSMAGAFRNGCN 464
M R G M +A+D+L + + N++ A+ N
Sbjct: 293 SMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLN 331
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 156/300 (52%), Gaps = 5/300 (1%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + G+QV+AL+ L +I + + L+ +Y+ CG++ +AR FD + N
Sbjct: 256 VLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKN 315
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ N +V A A + N +EA F+ + N FTF+ +L + I KG+Q+H+
Sbjct: 316 LVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHS 375
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ GF++++ + NALI MYS+CG + +A +VF+ M + +V+SWTSMI+G+
Sbjct: 376 RILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATR 435
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMI 256
A+ F +M G+ PN+ TY A++++ + G + F M E G VP + + ++
Sbjct: 436 ALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVV 495
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+S EA++L M K + + + L A + G++ +G+ ++ H
Sbjct: 496 DLLGRSGHLEEAMELVNSM---PFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPH 552
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 287/548 (52%), Gaps = 34/548 (6%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C++ C S+ + G+QVHA++ + ++F+ + LV +Y G V+ A ++F+K+P+
Sbjct: 207 CVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANA-LVDMYVKMGRVDIASVIFEKMPD 265
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V N ++ G+ AI M+ N F S +LKAC G G+Q+
Sbjct: 266 SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQI 325
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + ++D +G L+DMY+K L A +VF M RD++ W ++ISG + +
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRH 385
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV--------- 246
DEA +F ++ EGL N+ T A++ S A ++A + GF+
Sbjct: 386 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 445
Query: 247 ----------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
D++ +MI+ +Q A+KLF ML G++P+
Sbjct: 446 IDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
++ +L A + + G+++HA + + D F G+AL+ Y+KCGS++DA F
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+ V SW+AMIG +HG ++ELF RM++EG+ N +T+ SVL AC+H GLV++
Sbjct: 566 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
F SMKE +G+ ++EHY+C++D+L R+G++ +A +L+ +P S+ GA
Sbjct: 626 KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASR 685
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
+H +L E+ F + K V+L+N A+ G W+E +RK+MK+ N++K+P
Sbjct: 686 VHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAM 745
Query: 525 SRVEKRNE 532
S VE +++
Sbjct: 746 SWVEVKDK 753
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 248/534 (46%), Gaps = 59/534 (11%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
L + ++AL G +HA L + + SL++ L+ Y+ C AR VFD+IP+P
Sbjct: 11 LTRYAAAQALLPGAHLHANLLKSGF-LASLRNHLISFYSKCRRPCCARRVFDEIPDP--C 67
Query: 80 MLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
++W + +A++ N + AI F MR CN+F +VLK CV D + G QVHA
Sbjct: 68 HVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVP--DAQLGAQVHA 124
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVF-HGMFERDVVSWTSMISGYCNVSKVD 196
+A GF +DV V NAL+ MY G + ARRVF ER+ VSW ++S Y +
Sbjct: 125 MAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCG 184
Query: 197 EAVVLFERMKLEGLEPNQ-----------------------------------FTYNAII 221
+A+ +F M G++P + FT NA++
Sbjct: 185 DAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALV 244
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y + G + A F +M D+V+WNA+ISG + ++ A++L M SG+
Sbjct: 245 DMYVKMGRVDIASVIFEKMPDS----DVVSWNALISGCVLNGHDHRAIELLLQMKSSGLV 300
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN ++ +L+A G+ +GR+IH + + D + G L+DMY+K L DA +
Sbjct: 301 PNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKV 360
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ +++ WNA+I G D + +F + +EG+ N TL +VL + +
Sbjct: 361 FDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAA 420
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGA 458
++ ++ E+ G ++D + + +A + + + SM A
Sbjct: 421 SATRQV-HALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITA 479
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICAADGEWHEAENLR 510
C+ HG + + M E GL +PD FV+ S N CA+ + + + +
Sbjct: 480 LSQ-CD-HGEGAIKLFM--EMLRKGL-EPDPFVLSSLLNACASLSAYEQGKQVH 528
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 156/538 (28%), Positives = 250/538 (46%), Gaps = 58/538 (10%)
Query: 22 KCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
KC+ L G QVHA+ ++F + + LV +Y G G ++ AR VFD+ +
Sbjct: 111 KCVPDAQL--GAQVHAMAMATGFGSDVF-VANALVAMYGGFGFMDDARRVFDEAGSERN- 166
Query: 80 MLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
++W + SA+ N Q +AI F M + +F FS V+ AC G +I G+QVHA
Sbjct: 167 AVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHA 226
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ +MG+E DV NAL+DMY K G + A +F M + DVVSW ++ISG C ++ D
Sbjct: 227 MVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISG-CVLNGHDH 285
Query: 198 -AVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
A+ L +MK GL PN F ++I+ +
Sbjct: 286 RAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 345
Query: 224 --YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ + A F M+ DL+ WNA+ISG + R +EA +F G+ G+
Sbjct: 346 DMYAKNHFLDDAMKVFDWMSHR----DLILWNALISGCSHGGRHDEAFSIFYGLRKEGLG 401
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
N T+ VL++ + R++HAL ++G D + LID Y KC L DA +
Sbjct: 402 VNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRV 461
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
FE ++ + +MI + + +I+LF ML +G+ + L S+L+AC+
Sbjct: 462 FEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAY 521
Query: 402 EKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
E+G ++ + +R + + +A +V + G + +A +P S + A
Sbjct: 522 EQGKQVHAHLIKR---QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWS-AM 577
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD--GEWHEAENLRKIMKE 515
G HG A+ + + G+ P+ M S +CA + G EA+ MKE
Sbjct: 578 IGGLAQHGHGKRALELFGRMVDEGI-NPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 159/485 (32%), Positives = 266/485 (54%), Gaps = 2/485 (0%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
SL KL+ YA G+ AR VFD IP NV N M+ + + +A+ F M
Sbjct: 68 SLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSG 127
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
+ + +T+ VLKAC +++ G Q+H ++G + ++ VGN LI +Y KCG L A
Sbjct: 128 GFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEA 187
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR 227
R V M +DVVSW SM++GY + D+A+ + M +P+ T +++ +
Sbjct: 188 RCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNT 247
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
N + M E LV+WN MIS + ++ +++ L+ M ++P+ +T
Sbjct: 248 SSENVLYVEEMFMNLEK--KSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITC 305
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
VL+A G ++ +GR IH V R L ++ ++LIDMY++CG L+DA+ +F+ +
Sbjct: 306 ASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKF 365
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
++VASW ++I YG G +++ LF M G + + +++LSACSH GL+ +G
Sbjct: 366 RDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFY 425
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
F+ M + Y + EH+AC+VD+L RSGR+ EAY++++Q+PM + GA + C ++
Sbjct: 426 FKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYS 485
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
D+ + ++ ++ + +V+LSNI A G W E +R +MK + ++K PG S V
Sbjct: 486 NMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNV 545
Query: 528 EKRNE 532
E N+
Sbjct: 546 ELNNQ 550
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 118/535 (22%), Positives = 218/535 (40%), Gaps = 79/535 (14%)
Query: 18 CLLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C+L C S LR G Q+H + DLN+F + + L+ +Y CG + AR V D++ +
Sbjct: 138 CVLKACSCSDNLRIGLQLHGAVFKVGLDLNLF-VGNGLIALYGKCGCLPEARCVLDEMQS 196
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V N MV A F +A+ M + + T + +L A + + +
Sbjct: 197 KDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPA---VTNTSSENVL 253
Query: 136 HAVATQMGFENDVSVG-NALIDMYSKCGLLCSARRVFHGM----FERDVVSWTSMISGYC 190
+ M E V N +I +Y K + + ++ M E D ++ S++
Sbjct: 254 YVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACG 313
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV 250
++S + + E ++ + L PN N++I YAR G A F RM D+
Sbjct: 314 DLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFR----DVA 369
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
+W ++IS + + + A+ LF M SG P+++ +L A +G + G+
Sbjct: 370 SWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGK------ 423
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
F + D Y +IT I + + ++ G+ G VD +
Sbjct: 424 ---------FYFKQMTDDY-------------KITPI--IEHFACLVDLLGRSGRVDEAY 459
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL----EIFRSMKERYGVKISKEHYAC 426
+ ++M M+ NE ++LS+C ++ G+ ++ + E G +Y
Sbjct: 460 NIIKQM---PMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESG------YYVL 510
Query: 427 VVDMLCRSGRMVEAYDL--------LRQVPMYVT---NSMAGAFRNGCNIHGR-----RD 470
+ ++ ++GR E + +R++P N+ F G H + +
Sbjct: 511 LSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEE 570
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH---EAENLRKIMKEKNVQKQP 522
L+V +G + E+G P L ++ D E H +E L + N Q+ P
Sbjct: 571 LSVLVG-KMKELGY-VPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQESP 623
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/546 (31%), Positives = 284/546 (52%), Gaps = 34/546 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L +L C SK L+QG+ +H+L+ C + N F + LV +Y+ CG A VF I
Sbjct: 317 LTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF-IGCGLVDMYSKCGLAIDAIGVFKTI 375
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P++ + + ++ G +E+I F LMR N++T +L A +++ G+
Sbjct: 376 KKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQ 435
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+HA + GFE DV+V NAL+ MY K G + +++ M +RD++SW + +SG +
Sbjct: 436 SIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCG 495
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIAS--------YARR----------GDSNAAFA 235
D + +F M EG PN +T+ +I+ S Y R+ D+N
Sbjct: 496 MYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCT 555
Query: 236 FFSRMTAEGF-------------VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
M A+ V DL TW +I+ +AQ+ + +AL F+ M G+KP
Sbjct: 556 ALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKP 615
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N T+ G L S++ G+++H++V + G D+F GSAL+DMY+KCG +++A LF
Sbjct: 616 NEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALF 675
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E ++ +WN +I Y ++G + ++ F ML+EG+ + VT +LSACSH GLVE
Sbjct: 676 EALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVE 735
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G E F SM +G+ + +H AC+VD+L R G+ E D ++++ + +
Sbjct: 736 EGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGA 795
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
+H L + FE+ + +++LSNI A +G W + + +R +M K V+K+P
Sbjct: 796 SKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEP 855
Query: 523 GFSRVE 528
G S VE
Sbjct: 856 GCSWVE 861
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 148/525 (28%), Positives = 249/525 (47%), Gaps = 55/525 (10%)
Query: 20 LGKCMKSKALRQGKQVHA------LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L C AL GKQ+HA LL L++F + S LV +YA CG++ A +F +
Sbjct: 220 LKACSLCMALDLGKQMHAQAFKLGLL----LDLF-VGSALVDLYAKCGEIELASKMFIGM 274
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P N N ++ A G+ + F M E +CN+FT + VLK C ++K+G+
Sbjct: 275 PEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQ 334
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+H++ + G+E + +G L+DMYSKCGL A VF + + D+V W+++I+
Sbjct: 335 VIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQG 394
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------SN 231
+ +E++ LF M+L PNQ+T +++++ G+ SN
Sbjct: 395 QSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSN 454
Query: 232 AAFAFF---------SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
A + +++ DL++WNA +SG + L +F ML G P
Sbjct: 455 ALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIP 514
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N T +L + + GR++HA + + L + F +ALIDMY+KC L+DA F
Sbjct: 515 NMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAF 574
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
++++ +W +I Y + + ++ F +M +EG++ NE TL LS CS +E
Sbjct: 575 NRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLE 634
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA----YDLLRQVPMYVTNSMAGA 458
G ++ SM + G + +VDM + G M EA L+R+ + + G
Sbjct: 635 GGQQL-HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGY 693
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNICAADG 501
+N G+ + A+T + G+ PDG F + + C+ G
Sbjct: 694 AQN-----GQGNKALTAFRMMLDEGI-SPDGVTFTGILSACSHQG 732
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 204/420 (48%), Gaps = 40/420 (9%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFD 71
+ Y +L +C ++L K +H L+ + +N S L LV VYA C ARLV
Sbjct: 112 LKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLA 171
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
K+P+ +V ++ G ++I F M+ N+FT + LKAC + +
Sbjct: 172 KMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDL 231
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GKQ+HA A ++G D+ VG+AL+D+Y+KCG + A ++F GM E++ V+W +++GY
Sbjct: 232 GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQ 291
Query: 192 VSKVDEAVVLF-ERMKLE----------------------------------GLEPNQFT 216
V + LF M+L+ G E N+F
Sbjct: 292 RGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFI 351
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
++ Y++ G + A F + PD+V W+A+I+ Q + E++KLF M
Sbjct: 352 GCGLVDMYSKCGLAIDAIGVFKTIKK----PDIVVWSALITCLDQQGQSEESIKLFHLMR 407
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+ PN T+ +L A TG++Q G+ IHA V + G DV +AL+ MY K G +
Sbjct: 408 LGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVH 467
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
D L+E +++ SWNA + GM D + +F MLEEG N T IS+L +CS
Sbjct: 468 DGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 131/239 (54%), Gaps = 7/239 (2%)
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
+ P+ + +++ YA+ S A ++M D+V+W A+I G N+++
Sbjct: 143 INPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR----DVVSWTALIQGLVAEGFANDSI 198
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
LF+ M GI PN T+ L+A L ++ +G+++HA ++GL +D+F GSAL+D+Y
Sbjct: 199 YLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLY 258
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
+KCG ++ A +F +N +WN ++ Y + G V ++LF M+E ++ NE TL
Sbjct: 259 AKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLT 318
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC-VVDMLCRSGRMVEAYDLLRQV 447
+VL C++ +++G ++ S+ + G + E C +VDM + G ++A + + +
Sbjct: 319 TVLKGCANSKNLKQG-QVIHSLIIKCGYE-GNEFIGCGLVDMYSKCGLAIDAIGVFKTI 375
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/543 (30%), Positives = 283/543 (52%), Gaps = 34/543 (6%)
Query: 23 CMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
C AL+ G Q+HA L C +I ++ + + +YA CG + A+ +F+ +P ++
Sbjct: 287 CAGLSALKVGTQLHAHALKCDFGSDI-TVGTATLDMYAKCGSLADAQRIFNSLPKHSLQC 345
Query: 81 LNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVAT 140
N +++ EA+ +F L+ + N+ + S AC + G+Q+H+++
Sbjct: 346 YNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSV 405
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ +++ V N+++DMY KC L A +F M RD VSW ++I+ + +E +
Sbjct: 406 KSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLN 465
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD------------ 248
LF M +EP+QFTY +++ + + + N+ +R+ G D
Sbjct: 466 LFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYC 525
Query: 249 -------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+V+WNA+I+GF K +A F ML +KP+N T
Sbjct: 526 KCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAI 585
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
VL A S+ +G++IH + ++ LH DV+ S L+DMYSKCG+++D+ +FE K+
Sbjct: 586 VLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKD 645
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+WNAMI Y +HG+ + ++ FERM E +R N T +S+L AC+H G ++KGL F
Sbjct: 646 FVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFN 705
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
+M YG++ EHY+C++D++ RSGR+ EA L++++P + + C IHG
Sbjct: 706 AMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNI 765
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEK 529
++A ++ ++LSNI A G W + +RK+M+ ++K+PG S +E
Sbjct: 766 EIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEV 825
Query: 530 RNE 532
++E
Sbjct: 826 KDE 828
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 249/545 (45%), Gaps = 83/545 (15%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ +C +L+ GKQ HA ++ + + + + L+ +Y C +N A VF+K+ +
Sbjct: 49 IIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRD 108
Query: 78 VFMLNWMVMASAFTGNFQEAIGYF------------SLMREFIY--RCNK---------- 113
V N M+ A G A +F S++ F+ C K
Sbjct: 109 VISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGR 168
Query: 114 --------FTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
TF++VLKAC L D G QVH + +MGF DV G+AL+DMY+KC L
Sbjct: 169 SEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLD 228
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-- 223
+ ++F + ++ V W+++I+G + + LF+ M+ G+ +Q Y ++ S
Sbjct: 229 DSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCA 288
Query: 224 ---------------------------------YARRGDSNAAFAFFSRMTAEGFVPDLV 250
YA+ G A F+ + L
Sbjct: 289 GLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHS----LQ 344
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA-GGLTGSIQIGREIHAL 309
+NA+I G ++++ EAL+ F+ +L SG+ N ++++G A + G + GR++H+L
Sbjct: 345 CYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLD-GRQLHSL 403
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
+ L ++ ++++DMY KC +L +A +F+ ++ SWNA+I + ++G + +
Sbjct: 404 SVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEET 463
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+ LF ML M ++ T SVL ACS + G+EI + + G+ + ++D
Sbjct: 464 LNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRII-KSGLGLDSFVGGALID 522
Query: 430 MLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
M C+ G + EA +D + Q M N++ F + + A + E +M + K
Sbjct: 523 MYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGF----TLLKHSEDAHSFFYEMLKMSV-K 577
Query: 487 PDGFV 491
PD F
Sbjct: 578 PDNFT 582
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 184/385 (47%), Gaps = 54/385 (14%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
TFS +++ C +K GKQ HA GF DV + N L+ MY +C L A +VF M
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
+RDV+S+ +MISGY + +++ A N+F Y+ +R
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLA--------------NEFFYDT-----PKR------- 138
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQA 293
D+V+WN+M+SGF Q+ +++ +F M S + + T VL+A
Sbjct: 139 -------------DVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKA 185
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
+ +G ++H L+ RMG + DV TGSAL+DMY+KC L D+ +F +KN W
Sbjct: 186 CSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCW 245
Query: 354 NAMI-GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSM 411
+A+I GC + +ELF+ M + G+ ++ SV +C+ ++ G ++ ++
Sbjct: 246 SAIIAGCVQNDEHI-LGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHAL 304
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC--NIHGRR 469
K +G I+ +DM + G + +A + +P + A GC N G
Sbjct: 305 KCDFGSDITVG--TATLDMYAKCGSLADAQRIFNSLPKHSLQCY-NAIIVGCVRNEKGFE 361
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLS 494
L +FF++ L+ GF +S
Sbjct: 362 AL------QFFQLLLKSGLGFNEIS 380
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 151/291 (51%), Gaps = 9/291 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C +AL G ++H + + L + S + L+ +Y CG + A+ + D+I
Sbjct: 485 VLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQT 544
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
M++W + + FT + ++A +F M + + + FT++IVL AC L + GKQ+
Sbjct: 545 --MVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQI 602
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H ++ +DV + + L+DMYSKCG + + VF +D V+W +MI GY
Sbjct: 603 HGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLG 662
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNA 254
+EA+ FERM+LE + PN T+ +I+ + A G + +F+ M E G P + ++
Sbjct: 663 EEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSC 722
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
MI +S R +EALKL + M + + V +L + G+I+I +
Sbjct: 723 MIDIIGRSGRISEALKLIQEM---PFEADAVIWRTLLSICKIHGNIEIAEK 770
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 266 NEALKLFKGMLVSGIKPNNV-------TVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
N+ L++F +S ++ N T + ++Q S++ G++ HA + G D
Sbjct: 18 NKTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPD 77
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
V+ + L+ MY +C L A +FE ++V S+N MI Y G ++ + E F
Sbjct: 78 VYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFF----Y 133
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
+ + + V+ S+LS G K +++F M V + +A V+
Sbjct: 134 DTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVL 183
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 271/509 (53%), Gaps = 48/509 (9%)
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
N A + + NV N ++ A G+ EA+ FS +R+ + +F +K+C
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
L D+ G+ H A GFE D+ V +ALIDMYSKCG L AR +F + R+VVSWT
Sbjct: 1153 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 1212
Query: 184 SMISGYCNVSKVDEAVVLF-----ERMKLE------------------------------ 208
SMI+GY + D A++LF E ++E
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 1272
Query: 209 --------GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
G + + N ++ +YA+ G + F M + D ++WN+MI+ +A
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEK----DDISWNSMIAVYA 1328
Query: 261 QSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
QS EAL++F GM+ G++ N VT++ VL A G+++ G+ IH V +M L +V
Sbjct: 1329 QSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNV 1388
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
G+++IDMY KCG ++ A+ F+ + KNV SW AM+ YG HG ++++F +M+
Sbjct: 1389 CVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRA 1448
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G++ N +T +SVL+ACSH GLVE+G F +MK +Y ++ EHY C+VD+ R+G + E
Sbjct: 1449 GVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNE 1508
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
AY+L++++ M + G+ C IH DL ++ FE+ +V+LSN+ A
Sbjct: 1509 AYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYAD 1568
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
G W + E +R +MK + + K PGFS VE
Sbjct: 1569 AGRWADVERMRMLMKNRQLVKPPGFSLVE 1597
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 147/447 (32%), Positives = 215/447 (48%), Gaps = 43/447 (9%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGC 60
N + P N+ LL C K LRQ +HA + + L N L KL+ +Y+
Sbjct: 16 NIPLTPRGNIRAKKALFLLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTH 72
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
G + A L+F +I NP F N ++ A+ G ++A+ + M +KFTF V+
Sbjct: 73 GRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVI 132
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
KAC L I GK VH + GF DV V N LID Y KCG A +VF M R+VV
Sbjct: 133 KACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVV 192
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
SWT++ISG + + EA +F+ + + N ++ A+I Y R A F RM
Sbjct: 193 SWTTVISGLISCGDLQEARRIFDEIPSK----NVVSWTAMINGYIRNQQPEEALELFKRM 248
Query: 241 TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI 300
AE I PN T+ +++A G +
Sbjct: 249 QAE-----------------------------------NIFPNEYTMVSLIKACTEMGIL 273
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY 360
+GR IH + + I V+ G+ALIDMYSKCGS+KDA +FE K++ +WN+MI
Sbjct: 274 TLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSL 333
Query: 361 GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKIS 420
G HG+ ++ LF M ++ + +T I VL AC H V++G F M + YG+
Sbjct: 334 GVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPI 393
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQV 447
EHY C+ ++ RS + EA+ ++V
Sbjct: 394 PEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 182/414 (43%), Gaps = 63/414 (15%)
Query: 16 LDCLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
C + C L G+ H A + + ++F + S L+ +Y+ CG + AR +FD+I
Sbjct: 1145 FPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLF-VSSALIDMYSKCGQLKDARALFDEI 1203
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR-----------CNKFTFSIVLKA 122
P NV ++W M + + N ++A L ++F+ + VL A
Sbjct: 1204 PLRNV--VSWTSMITGYVQN-EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSA 1260
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C + + VH + GF+ + VGN L+D Y+KCG +++VF M E+D +SW
Sbjct: 1261 CSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISW 1320
Query: 183 TSMISGYCNVSKVDEAVVLFERM-KLEGLEPNQFTYNA---------------------- 219
SMI+ Y EA+ +F M + G+ N T +A
Sbjct: 1321 NSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVI 1380
Query: 220 -------------IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
II Y + G A F RM + ++ +W AM++G+ R
Sbjct: 1381 KMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEK----NVKSWTAMVAGYGMHGRAK 1436
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE-IHALVCRMGLHIDVFTGSAL 325
EAL +F M+ +G+KPN +T VL A G ++ G +A+ + + + +
Sbjct: 1437 EALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCM 1496
Query: 326 IDMYSKCGSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVD----SSIELFE 374
+D++ + G L +A L + ++K + W +++G H VD ++ +LFE
Sbjct: 1497 VDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE 1550
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 8/218 (3%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C + ALR GK +H + DL + + ++ +Y CG V A+ FD++
Sbjct: 1356 LSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMK 1415
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NV MV G +EA+ F M + N TF VL AC +++G
Sbjct: 1416 EKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWH 1475
Query: 135 -VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+A+ + E + ++D++ + G L A + M + D V W S++ G C +
Sbjct: 1476 WFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL-GACRI 1534
Query: 193 SK-VDEAVVLFERMKLEGLEPNQFTYNAIIAS-YARRG 228
K VD + + KL L+P+ Y ++++ YA G
Sbjct: 1535 HKNVDLGEIAAQ--KLFELDPDNCGYYVLLSNLYADAG 1570
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 274/504 (54%), Gaps = 48/504 (9%)
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ +VF N ++ A +G+ EA+ FS MR+ + +F +KAC LLDI G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSG 95
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
KQ H A G+++D+ V +ALI MYS CG L AR+VF + +R++VSWTSMI GY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 193 SKVDEAVVLFERMKLE----------------------------GLEPNQFTY------- 217
+AV LF+ + +E GL + ++
Sbjct: 156 GNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFD 215
Query: 218 ------NAIIASYARRGDSNAAFA--FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
N ++ +YA+ G+ A A F ++ + D V++N+++S +AQS NEA
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK----DRVSYNSIMSVYAQSGMSNEAF 271
Query: 270 KLFKGMLVSGIKP-NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
+F+ ++ + N +T++ VL A +G+++IG+ IH V RMGL DV G+++IDM
Sbjct: 272 DVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y KCG ++ AR F+ + KNV SW AMI YG HG ++ELF M++ G+R N +T
Sbjct: 332 YCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+SVL+ACSH GL + G F +MK R+GV+ EHY C+VD+L R+G + +AYDL++++
Sbjct: 392 VSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMK 451
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
M + + + C IH +LA FE+ +++LS+I A G W + E
Sbjct: 452 MEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVER 511
Query: 509 LRKIMKEKNVQKQPGFSRVEKRNE 532
+R MK + + K PGFS +E E
Sbjct: 512 VRMTMKNRGLVKPPGFSLLELNGE 535
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 179/409 (43%), Gaps = 57/409 (13%)
Query: 18 CLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C + C + GKQ H A + +IF + S L+ +Y+ CG + AR VFD+IP
Sbjct: 81 CAIKACSSLLDIFSGKQTHQQAFVFGYQSDIF-VSSALIVMYSTCGKLEDARKVFDEIPK 139
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFS--LMREFIYRCNKFTFSI----VLKACVGLLDI 129
N+ M+ GN +A+ F L+ E F S+ V+ AC +
Sbjct: 140 RNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAK 199
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL--LCSARRVFHGMFERDVVSWTSMIS 187
+ +H+ + GF+ VSVGN L+D Y+K G + AR++F + ++D VS+ S++S
Sbjct: 200 GLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMS 259
Query: 188 GYCNVSKVDEAVVLFERMKLE------------------------------------GLE 211
Y +EA +F R+ E GLE
Sbjct: 260 VYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLE 319
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
+ +II Y + G A F RM + ++ +W AMI+G+ +AL+L
Sbjct: 320 DDVIVGTSIIDMYCKCGRVETARLAFDRMKNK----NVRSWTAMIAGYGMHGHAAKALEL 375
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE-IHALVCRMGLHIDVFTGSALIDMYS 330
F M+ SG++PN +T VL A G +G +A+ R G+ + ++D+
Sbjct: 376 FPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLG 435
Query: 331 KCGSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVD----SSIELFE 374
+ G L+ A L + +++ + W++++ H V+ S LFE
Sbjct: 436 RAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFE 484
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
+GKC+ + +R G + ++ T+ ++ +Y CG V +ARL FD++ N NV
Sbjct: 305 IGKCIHDQVIRMGLEDDVIVGTS----------IIDMYCKCGRVETARLAFDRMKNKNVR 354
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHA 137
M+ G+ +A+ F M + R N TF VL AC GL D+ +A
Sbjct: 355 SWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDV-GWHWFNA 413
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSK-V 195
+ + G E + ++D+ + G L A + M E D + W+S+++ C + K V
Sbjct: 414 MKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAA-CRIHKNV 472
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIAS-YARRG 228
+ A + R L L+P+ Y +++ YA G
Sbjct: 473 ELAEISVAR--LFELDPSNCGYYMLLSHIYADSG 504
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 269/513 (52%), Gaps = 41/513 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
LV Y G V A FD++ + +V N M+ EA+G F M +
Sbjct: 110 LVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGD 169
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
T S VL CV L D +H A + G ++++ V NA+ID+Y K G+L R+VF
Sbjct: 170 AVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFD 229
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------- 217
GM RD+V+W S+ISG+ +V AV +F M+ G+ P+ T
Sbjct: 230 GMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICG 289
Query: 218 ---------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
NAI+ YA+ AA F M V D V+WN +I
Sbjct: 290 GRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMP----VRDAVSWNTLI 345
Query: 257 SGFAQSKRENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+G+ Q+ +EA+ ++ M G+KP T VL A G++Q G +HAL + GL
Sbjct: 346 TGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGL 405
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
++DV+ G+ +ID+Y+KCG L +A LFE T ++ WNA+I G HG ++ LF +
Sbjct: 406 NLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQ 465
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M +EG+ + VT +S+L+ACSH GLV++G F M+ YG+K +HYAC+VDM R+G
Sbjct: 466 MQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAG 525
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
++ +A+D +R +P+ +++ GA C IHG ++ + FE+ + +V++SN
Sbjct: 526 QLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSN 585
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ A G+W + +R +++ +N+QK PG+S +E
Sbjct: 586 MYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIE 618
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 212/439 (48%), Gaps = 42/439 (9%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF-ENDVSVGNALIDMYSKCGLLCSARRV 170
+ FTF +L+A G Q+HA A ++G D AL+ Y + G + A R
Sbjct: 70 DAFTFPPLLRAAQG---PGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M RDV +W +M+SG C ++ EAV LF RM +EG+ + T ++++ GD
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186
Query: 231 NAAFAFFSRMTAEG-----FV--------------------------PDLVTWNAMISGF 259
A A G FV DLVTWN++ISG
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI-D 318
Q + A+++F GM SG+ P+ +T+ + A G I GR +H + R G + D
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+ G+A++DMY+K ++ A+ +F+ +++ SWN +I Y ++G+ +I +++ M +
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQK 366
Query: 379 -EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
EG++ + T +SVL A SH G +++G + ++ + G+ + CV+D+ + G++
Sbjct: 367 HEGLKPIQGTFVSVLPAYSHLGALQQGTRM-HALSIKTGLNLDVYVGTCVIDLYAKCGKL 425
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSN 495
EA L Q P T A +G +HG A+++ + + G+ PD FV L
Sbjct: 426 DEAMLLFEQTPRRSTGPW-NAVISGVGVHGHGAKALSLFSQMQQEGI-SPDHVTFVSLLA 483
Query: 496 ICAADGEWHEAENLRKIMK 514
C+ G + N +M+
Sbjct: 484 ACSHAGLVDQGRNFFNMMQ 502
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 28 ALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
AL+QG ++HAL LN+ + + ++ +YA CG ++ A L+F++ P + N ++
Sbjct: 389 ALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVIS 448
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQ-VHAVATQMG 143
G+ +A+ FS M++ + TF +L AC GL+D +G+ + + T G
Sbjct: 449 GVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVD--QGRNFFNMMQTAYG 506
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKVDEAVVLF 202
+ ++DM+ + G L A M + D W +++ G C + E +
Sbjct: 507 IKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALL-GACRIHGNVEMGKVA 565
Query: 203 ERMKLEGLEPNQFTYNAIIAS-YARRG 228
+ E L+P Y ++++ YA+ G
Sbjct: 566 SQNLFE-LDPKNVGYYVLMSNMYAKVG 591
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 285/550 (51%), Gaps = 34/550 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L +L C SK L+QG+ +H+L+ C + N F + LV +Y+ CG A VF I
Sbjct: 317 LTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF-IGCGLVDMYSKCGLAIDAIGVFKTI 375
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P++ + + ++ G +E+I F LMR N++T +L A +++ G+
Sbjct: 376 KKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQ 435
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+HA + GFE DV+V NAL+ MY K G + +++ M +RD++SW + +SG +
Sbjct: 436 SIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCG 495
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIAS--------YARR----------GDSNAAFA 235
D + +F M EG PN +T+ +I+ S Y R+ D+N
Sbjct: 496 MYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCT 555
Query: 236 FFSRMTAEGF-------------VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
M A+ V DL TW +I+ +AQ+ + +AL F+ M G+KP
Sbjct: 556 ALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKP 615
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N T+ G L S++ G+++H++V + G D+F GSAL+DMY+KCG +++A LF
Sbjct: 616 NEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALF 675
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E ++ +WN +I Y ++G + ++ F ML+EG+ + VT +LSACSH GLVE
Sbjct: 676 EALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVE 735
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G E F SM +G+ + +H AC+VD+L R G+ E D ++++ + +
Sbjct: 736 EGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGA 795
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
+H L + FE+ + +++LSNI A +G W + + +R +M K V+K+P
Sbjct: 796 SKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEP 855
Query: 523 GFSRVEKRNE 532
G S VE +
Sbjct: 856 GCSWVEANGQ 865
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 148/525 (28%), Positives = 249/525 (47%), Gaps = 55/525 (10%)
Query: 20 LGKCMKSKALRQGKQVHA------LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L C AL GKQ+HA LL L++F + S LV +YA CG++ A +F +
Sbjct: 220 LKACSLCMALDLGKQMHAQAFKLGLL----LDLF-VGSALVDLYAKCGEIELASKMFIGM 274
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P N N ++ A G+ + F M E +CN+FT + VLK C ++K+G+
Sbjct: 275 PEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQ 334
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+H++ + G+E + +G L+DMYSKCGL A VF + + D+V W+++I+
Sbjct: 335 VIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQG 394
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------SN 231
+ +E++ LF M+L PNQ+T +++++ G+ SN
Sbjct: 395 QSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSN 454
Query: 232 AAFAFF---------SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
A + +++ DL++WNA +SG + L +F ML G P
Sbjct: 455 ALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIP 514
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N T +L + + GR++HA + + L + F +ALIDMY+KC L+DA F
Sbjct: 515 NMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAF 574
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
++++ +W +I Y + + ++ F +M +EG++ NE TL LS CS +E
Sbjct: 575 NRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLE 634
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA----YDLLRQVPMYVTNSMAGA 458
G ++ SM + G + +VDM + G M EA L+R+ + + G
Sbjct: 635 GGQQL-HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGY 693
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNICAADG 501
+N G+ + A+T + G+ PDG F + + C+ G
Sbjct: 694 AQN-----GQGNKALTAFRMMLDEGI-SPDGVTFTGILSACSHQG 732
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 204/420 (48%), Gaps = 40/420 (9%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFD 71
+ Y +L +C ++L K +H L+ + +N S L LV VYA C ARLV
Sbjct: 112 LKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLA 171
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
K+P+ +V ++ G ++I F M+ N+FT + LKAC + +
Sbjct: 172 KMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDL 231
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GKQ+HA A ++G D+ VG+AL+D+Y+KCG + A ++F GM E++ V+W +++GY
Sbjct: 232 GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQ 291
Query: 192 VSKVDEAVVLF-ERMKLE----------------------------------GLEPNQFT 216
V + LF M+L+ G E N+F
Sbjct: 292 RGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFI 351
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
++ Y++ G + A F + PD+V W+A+I+ Q + E++KLF M
Sbjct: 352 GCGLVDMYSKCGLAIDAIGVFKTIKK----PDIVVWSALITCLDQQGQSEESIKLFHLMR 407
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+ PN T+ +L A TG++Q G+ IHA V + G DV +AL+ MY K G +
Sbjct: 408 LGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVH 467
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
D L+E +++ SWNA + GM D + +F MLEEG N T IS+L +CS
Sbjct: 468 DGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 131/239 (54%), Gaps = 7/239 (2%)
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
+ P+ + +++ YA+ S A ++M D+V+W A+I G N+++
Sbjct: 143 INPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR----DVVSWTALIQGLVAEGFANDSI 198
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
LF+ M GI PN T+ L+A L ++ +G+++HA ++GL +D+F GSAL+D+Y
Sbjct: 199 YLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLY 258
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
+KCG ++ A +F +N +WN ++ Y + G V ++LF M+E ++ NE TL
Sbjct: 259 AKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLT 318
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC-VVDMLCRSGRMVEAYDLLRQV 447
+VL C++ +++G ++ S+ + G + E C +VDM + G ++A + + +
Sbjct: 319 TVLKGCANSKNLKQG-QVIHSLIIKCGYE-GNEFIGCGLVDMYSKCGLAIDAIGVFKTI 375
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 280/544 (51%), Gaps = 33/544 (6%)
Query: 32 GKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
GK +H L L + + S LVG+Y C A +F+++P +V N ++
Sbjct: 125 GKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQ 184
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
+GNF++A+ YF LMR F + N T + + +C LLD+ +G ++H GF D +
Sbjct: 185 SGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFI 244
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
+AL+DMY KCG L A +F M ++ VV+W SMISGY + + LF+RM EG+
Sbjct: 245 SSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGV 304
Query: 211 EPNQFTYNAIIASYAR-----RGDSNAAFAFFSRMTAEGFV------------------- 246
+P T +++I +R G + +R+ + FV
Sbjct: 305 KPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEK 364
Query: 247 -------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
+V+WN MISG+ + EAL LF M S ++ + +T T VL A +
Sbjct: 365 IFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAA 424
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
++ G+EIH L+ L + AL+DMY+KCG++ +A ++F+ +++ SW +MI
Sbjct: 425 LEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITA 484
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
YG HG ++ELF ML+ ++ + V +++LSAC H GLV++G F M YG+
Sbjct: 485 YGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIP 544
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN-SMAGAFRNGCNIHGRRDLAVTMGEE 478
EHY+C++D+L R+GR+ EAY++L+Q P + + + C +H DL +
Sbjct: 545 RVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIART 604
Query: 479 FFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEV 538
+ +++LSN+ A+ +W E +R MKE ++K PG S +E + + V
Sbjct: 605 LIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFV 664
Query: 539 QNES 542
++ S
Sbjct: 665 EDNS 668
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 152/524 (29%), Positives = 246/524 (46%), Gaps = 49/524 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL CM SK+L+QGK +H + T L +IF K+ L+ Y C + A+ VFD + NP
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKT-LINQYLSCHLYDHAKCVFDNMENP 67
Query: 77 NVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIY-RCNKFTFSIVLKACVGLLDIKKGK 133
L W + + +T N+ EA+ F + + Y + + +T+ V KAC GL GK
Sbjct: 68 CEISL-WNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGK 126
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+H + G D+ VG++L+ MY KC A +F+ M E+DV W ++IS Y
Sbjct: 127 MIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSG 186
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD----- 248
+A+ F M+ G EPN T I+S AR D N + GF+ D
Sbjct: 187 NFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISS 246
Query: 249 --------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+V WN+MISG+ ++LFK M G+KP
Sbjct: 247 ALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKP 306
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
T++ ++ + + G+ +H R + DVF S+L+D+Y KCG ++ A +F
Sbjct: 307 TLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIF 366
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
++ V SWN MI Y G + ++ LF M + + ++ +T SVL+ACS +E
Sbjct: 367 KLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALE 426
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAF 459
KG EI + E+ + ++ ++DM + G + EA+ + + +P + SM A+
Sbjct: 427 KGKEIHNLIIEK-KLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAY 485
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADG 501
+ HG A+ + E + + KPD F+ + + C G
Sbjct: 486 GS----HGHAYGALELFAEMLQSNV-KPDRVAFLAILSACGHAG 524
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 157/300 (52%), Gaps = 10/300 (3%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLV 69
++ L L+ C +S L +GK VH N + ++F + S L+ +Y CG V A +
Sbjct: 307 TLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVF-VNSSLMDLYFKCGKVELAEKI 365
Query: 70 FDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
F IP V ++W VM S + G EA+G FS MR+ + TF+ VL AC L
Sbjct: 366 FKLIPKSKV--VSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLA 423
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
++KGK++H + + +N+ V AL+DMY+KCG + A VF + +RD+VSWTSMI+
Sbjct: 424 ALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMIT 483
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM-TAEGFV 246
Y + A+ LF M ++P++ + AI+++ G + +F++M G +
Sbjct: 484 AYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGII 543
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
P + ++ +I ++ R +EA ++ + I+ + ++ + A L +I +G EI
Sbjct: 544 PRVEHYSCLIDLLGRAGRLHEAYEILQQN--PEIRDDVELLSTLFSACRLHRNIDLGAEI 601
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/517 (33%), Positives = 277/517 (53%), Gaps = 47/517 (9%)
Query: 27 KALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCG-DVNSARL-VFDKIPNPNVFMLN 82
K L Q KQVHA + N D + + L +KL+ V+ L +F+++ PN F+ N
Sbjct: 57 KNLTQIKQVHARILLNGLDQSCYVL-AKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYN 115
Query: 83 WMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
++ +E+ ++SLMR+ FTF+ + KAC +D+ G+Q+H +
Sbjct: 116 ALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILV 175
Query: 143 G-FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
G F D+ VGN++IDMY KCG L R+VF M RDV+SWT +IS
Sbjct: 176 GGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELIS-------------- 221
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
+Y + G+ +A F + V D+V W M+SGFAQ
Sbjct: 222 ---------------------AYVKSGNMESAGELFDGLP----VKDMVAWTVMVSGFAQ 256
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV--CRMGLHIDV 319
+ + EA+ F+ M G++ + +T+ GV+ A G+ + I + G V
Sbjct: 257 NAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSV 316
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
GSALIDMYSKCGS+ DA +F+ + +NV S+++MI + HG V +++LF+ M++
Sbjct: 317 VVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKT 376
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
++ N VT I VL+ACSH G+VE+G +IF M++ YG+K S +HY C+VD+L R+GR+ E
Sbjct: 377 EIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQE 436
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A++L++ +P+ + GA C IH D+A FE+ +++L+NI A+
Sbjct: 437 AHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYAS 496
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEK 536
G W++ +RK+M+ + ++K P FS +E V +
Sbjct: 497 CGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHE 533
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 193/599 (32%), Positives = 297/599 (49%), Gaps = 76/599 (12%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLV 69
LS + +L C + + LR GK +H L+ + F L S L+ YA C ++ AR V
Sbjct: 136 LSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRV 195
Query: 70 FD-------------------------------KIPNPNVFMLNWMVMASAFTGNFQ--- 95
FD K+P +V + W + S F+ N
Sbjct: 196 FDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDV--VAWTTLISGFSKNGDGCG 253
Query: 96 EAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNAL 154
+A+ F LM R N+FTF V++AC L + G+ VH + + G E D S+G AL
Sbjct: 254 KALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGAL 313
Query: 155 IDMYSKC-------------------------------GLLCSARRVFHGMFERDVVSWT 183
++ Y +C G + A VF+GM E + VS+
Sbjct: 314 VEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYN 373
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE 243
MI GY ++D++ LFE+M + F+ N +I+ Y+R G+ + A F E
Sbjct: 374 LMIKGYAVGGQMDDSKRLFEKMPCRTI----FSSNTMISVYSRNGEIDKALELFEETKNE 429
Query: 244 GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
D VTWN+MISG+ S + EALKL+ M I+ T + + A GS+Q G
Sbjct: 430 ---KDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQG 486
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
+ +HA + + +V+ G++LIDMYSKCGS+ +A+T F NVA+W A+I + H
Sbjct: 487 QLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYH 546
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
G+ +I LF+ M+E+G+ N T + VLSACS GLV +G++IF SM+ Y V + EH
Sbjct: 547 GLGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEH 606
Query: 424 YACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMG 483
YACVVD+L RSG + EA + ++++P+ + GA + C ++ + E+ F
Sbjct: 607 YACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFD 666
Query: 484 LRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
+ +V+LSNI A G W E +RKI++ V+K PG S +E N+ +++ S
Sbjct: 667 PKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRS 725
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 220/499 (44%), Gaps = 91/499 (18%)
Query: 8 INNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGV--YAGCGDVNS 65
+ ++S+ + + K K + L++ K L + N+ + S + + YA ++
Sbjct: 35 LRSISMMLIKASISKAWKHQRLKEFK----LYTAHQSNLSEIISTNIAISNYAKQSKLDV 90
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
AR +FD++P V N M+ + + G F EA+ M + ++ TFS VL C
Sbjct: 91 ARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCAR 150
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
L ++ GK +H + + G E+ VG+AL+ Y+ C + ARRVF + R+ V W+ M
Sbjct: 151 LRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLM 210
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
+ GY + +D+A+ +F +M RR
Sbjct: 211 LVGYVTCNVMDDALSVFVKM-------------------PRR------------------ 233
Query: 246 VPDLVTWNAMISGFAQSKRE-NEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIG 303
D+V W +ISGF+++ +AL++F+ M+ SG PN T V++A G G + +G
Sbjct: 234 --DVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVG 291
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKC------------------------------- 332
R +H L+ + GL D G AL++ Y +C
Sbjct: 292 RTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISM 351
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G ++DA +F N S+N MI Y G +D S LFE+M + ++ T+ISV
Sbjct: 352 GRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSN-TMISVY 410
Query: 393 SACSHGGLVEKGLEIFRSMK-ERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVP 448
S G ++K LE+F K E+ V + ++ SG+ EA Y + ++
Sbjct: 411 ---SRNGEIDKALELFEETKNEKDPVT-----WNSMISGYIHSGQPEEALKLYITMHRLS 462
Query: 449 MYVTNSMAGAFRNGCNIHG 467
+ T S A + C+ G
Sbjct: 463 IQQTRSTFSALFHACSCLG 481
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 167/515 (32%), Positives = 282/515 (54%), Gaps = 51/515 (9%)
Query: 28 ALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
AL G+Q+H + + L N+F + + LV +Y CG +++AR VFD P +V N ++
Sbjct: 133 ALEYGRQLHGHVLKHGLQYNVF-VHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMII 191
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
A G F+E+ F +M + T +VL AC L D++ GK+VH+ E
Sbjct: 192 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVE 251
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+++ + NA+IDMY+ CG + SA +F M RD++SWT+++SG+ N+ ++D
Sbjct: 252 SNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEID--------- 302
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
A +F +M + D V+W AMI G+ +S R
Sbjct: 303 --------------------------VARNYFDKMPEK----DYVSWTAMIDGYIRSNRF 332
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EAL+LF+ M + +KP+ T+ VL A G++++G I + R + D+F +AL
Sbjct: 333 KEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNAL 392
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
IDMY KCG + A ++F ++ +W AMI +G + ++++F ML+ + +E
Sbjct: 393 IDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDE 452
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
+T I VLSAC+H GLV+KG + F M ++G++ + HY C+VD+L R+GR+ EAY+++
Sbjct: 453 ITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIE 512
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG---FVMLSNICAADGE 502
+P+ + + GA GC ++ D+A + ++ E+ +PD +V+L NI AA
Sbjct: 513 NMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILEL---EPDNGAVYVLLCNIYAACKR 569
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFV 534
W++ LR++M +K ++K PG S +E + +EFV
Sbjct: 570 WNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFV 604
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 179/373 (47%), Gaps = 53/373 (14%)
Query: 19 LLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNS----------- 65
+L C K K LR GK+VH+ + C + N+ L++ ++ +YA CG+++S
Sbjct: 225 VLSACSKLKDLRTGKKVHSYVKNCKVESNLV-LENAMIDMYADCGEMDSALGIFRSMNNR 283
Query: 66 --------------------ARLVFDKIPNPNVFMLNWMVMASAF--TGNFQEAIGYFSL 103
AR FDK+P + ++W M + + F+EA+ F
Sbjct: 284 DIISWTTIVSGFTNLGEIDVARNYFDKMPEKDY--VSWTAMIDGYIRSNRFKEALELFRN 341
Query: 104 MREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
M+ + ++FT VL AC L ++ G+ + + +ND+ V NALIDMY KCG
Sbjct: 342 MQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGD 401
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
+ A +F M +RD +WT+MI G ++A+ +F M + P++ TY ++++
Sbjct: 402 VDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSA 461
Query: 224 YARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
G + +F RMT++ G P++ + ++ A++ R EA ++ + M IK
Sbjct: 462 CTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENM---PIKA 518
Query: 283 NNVTVTGVLQAGGLTGSIQIGRE--IHALVCRMGLHIDVFTGSA---LIDMYSKCGSLKD 337
N++ V G L AG ++ RE + +V + L ++ G+ L ++Y+ C D
Sbjct: 519 NSI-VWGALLAG-----CRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWND 572
Query: 338 ARTLFEITRIKNV 350
R L ++ K +
Sbjct: 573 LRELRQMMMDKGI 585
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 13/290 (4%)
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
F + R+ E P+L WN MI G+++ + L+ ML G+KP+ T + +
Sbjct: 68 FQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKG 127
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
+++ GR++H V + GL +VF +AL+ MY CG L AR +F++ +V +W
Sbjct: 128 FTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITW 187
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
N +I Y K G + S LF M ++ + VTL+ VLSACS + G ++ +K
Sbjct: 188 NMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKN 247
Query: 414 -RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV---PMYVTNSMAGAFRNGCNIHGRR 469
+ + E+ ++DM G M A + R + + ++ F N I R
Sbjct: 248 CKVESNLVLEN--AMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVAR 305
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ M E+ + DG++ + EA L + M+ NV+
Sbjct: 306 NYFDKMPEKDYVSWTAMIDGYI-------RSNRFKEALELFRNMQATNVK 348
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/516 (31%), Positives = 273/516 (52%), Gaps = 45/516 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C +AL +G+++H+ + L + + L+ +Y C + AR FD++ +
Sbjct: 286 LLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRD 345
Query: 78 VFMLNWMVMASAFTG-----NFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
V + M+ A +G + E MR NK TF +LKAC +++G
Sbjct: 346 VISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQG 405
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+Q+HA +++GFE+D S+ A+ +MY+KCG + A +VF M ++VV+W S+++ Y
Sbjct: 406 RQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKC 465
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
GD +A FS M+ ++V+W
Sbjct: 466 -----------------------------------GDLTSAEKVFSEMSTR----NVVSW 486
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N MI+G+AQS + +L M V G +P+ VT+ +L+A G +++ G+ +HA +
Sbjct: 487 NLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVK 546
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
+GL D ++LI MYSKCG + +ART+F+ ++ +WNAM+ YG+HG+ +++L
Sbjct: 547 LGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDL 606
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F+RML+E + NE+T +V+SAC GLV++G EIFR M+E + +K K+HY C+VD+L
Sbjct: 607 FKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLG 666
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
R+GR+ EA + ++++P S+ A C H LA + +V
Sbjct: 667 RAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVT 726
Query: 493 LSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
LSNI A G W ++ +RK+M +K ++K G S +E
Sbjct: 727 LSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIE 762
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 165/587 (28%), Positives = 266/587 (45%), Gaps = 88/587 (14%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDK 72
N C++ C K + GK VH L L I L + L+ Y+ GDV S VF +
Sbjct: 79 NTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRR 138
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGY--FSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ +V + W M +A+ GN A + F M++ N+ TF +LKAC ++
Sbjct: 139 MTLRDV--VTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLE 196
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
K +++H V G E DV+V ALI MYSKCG + A +F M ER+VVSWT++I
Sbjct: 197 KAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANA 256
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
K++EA L+E+M G+ PN T+
Sbjct: 257 QHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVV 316
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE-----NEALK 270
NA+I Y + A F RM+ D+++W+AMI+G+AQS + +E +
Sbjct: 317 VANALITMYCKCNCIQDARETFDRMSKR----DVISWSAMIAGYAQSGYQDKESLDEVFQ 372
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
L + M G+ PN VT +L+A + G+++ GR+IHA + ++G D +A+ +MY+
Sbjct: 373 LLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYA 432
Query: 331 KCGSLKDARTLF----------------------EIT---------RIKNVASWNAMIGC 359
KCGS+ +A +F ++T +NV SWN MI
Sbjct: 433 KCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAG 492
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
Y + G + EL M EG + + VT+IS+L AC +E+G ++ + + G++
Sbjct: 493 YAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERG-KLVHAEAVKLGLES 551
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEF 479
++ M + G + EA + ++ T + A G HG AV + +
Sbjct: 552 DTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAW-NAMLAGYGQHGIGPEAVDLFKRM 610
Query: 480 FEMGLRKPDG---FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
+ R P F + + C G E + +IM+E + + +PG
Sbjct: 611 LKE--RVPPNEITFTAVISACGRAGLVQEGREIFRIMQE-DFRMKPG 654
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 195/389 (50%), Gaps = 45/389 (11%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G +EAI ++++ N T+ +++ C L + GK VH ++G D+ +G
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N+LI+ YSK G + S +VF M RDVV+W+SMI+ Y + +A FERMK +E
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176
Query: 212 PNQFTY-----------------------------------NAIIASYARRGDSNAAFAF 236
PN+ T+ A+I Y++ G+ + A
Sbjct: 177 PNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEI 236
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F +M ++V+W A+I AQ ++ NEA +L++ ML +GI PN VT +L +
Sbjct: 237 FQKMKER----NVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNT 292
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
++ GR IH+ + GL DV +ALI MY KC ++DAR F+ ++V SW+AM
Sbjct: 293 PEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAM 352
Query: 357 IGCYGKHGM-----VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
I Y + G +D +L ERM EG+ N+VT +S+L ACS G +E+G +I +
Sbjct: 353 IAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEI 412
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ G + + + +M + G + EA
Sbjct: 413 S-KVGFESDRSLQTAIFNMYAKCGSIYEA 440
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 39/260 (15%)
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-------------------------- 223
C ++ EA+ L +K GL N TY II
Sbjct: 54 CKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDI 113
Query: 224 ---------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
Y++ GD + F RMT + D+VTW++MI+ +A + +A F+
Sbjct: 114 YLGNSLINFYSKFGDVASVEQVFRRMT----LRDVVTWSSMIAAYAGNNHPAKAFDTFER 169
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M + I+PN +T +L+A ++ REIH +V G+ DV +ALI MYSKCG
Sbjct: 170 MKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGE 229
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
+ A +F+ + +NV SW A+I +H ++ + EL+E+ML+ G+ N VT +S+L++
Sbjct: 230 ISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNS 289
Query: 395 CSHGGLVEKGLEIFRSMKER 414
C+ + +G I + ER
Sbjct: 290 CNTPEALNRGRRIHSHISER 309
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 281/542 (51%), Gaps = 32/542 (5%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C L GK+VHA + T ++ F + + LV +Y G ++ AR VFD + +
Sbjct: 164 VLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRD 223
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V N MV A +G++++A F M++ + NK +F +L C + GK VHA
Sbjct: 224 VSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHA 283
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
G +D+ V +LI MY+ CG + ARRVF M RDVVSWT MI GY +++
Sbjct: 284 QCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIED 343
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL-------- 249
A LF M+ EG++P++ TY I+ + A + N A S++ GF DL
Sbjct: 344 AFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVH 403
Query: 250 -----------------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
V+W+AMI + ++ EA + F M S I+P+ VT
Sbjct: 404 MYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVT 463
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+L A G G++ +G EI+ + L V G+ALI M +K GS++ AR +F+
Sbjct: 464 YINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMV 523
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
++V +WNAMIG Y HG ++ LF+RML+E R N VT + VLSACS G V++G
Sbjct: 524 RRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRR 583
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F + E G+ + + Y C+VD+L R+G + EA L++ +P+ T+S+ + C IH
Sbjct: 584 FFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIH 643
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
G D+A E + +V LS++ AA G W +RK+M+ + ++K+ G +
Sbjct: 644 GNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTW 703
Query: 527 VE 528
+E
Sbjct: 704 IE 705
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/427 (31%), Positives = 212/427 (49%), Gaps = 42/427 (9%)
Query: 19 LLGKCMKSKALRQGKQV--HALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L +C + + GKQV H + LNI+ L + L+ +Y+ CG+V AR +FD + N
Sbjct: 63 LFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNT-LIKLYSICGNVTEARQIFDSVENK 121
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
V N ++ A G+ +EA F M + + TF VL AC + GK+VH
Sbjct: 122 TVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVH 181
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A GF +D +G AL+ MY K G + AR+VF G+ RDV ++ M+ GY +
Sbjct: 182 AQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWE 241
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
+A LF RM+ GL+PN+ ++ ++I
Sbjct: 242 KAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLI 301
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y G A F M V D+V+W MI G+A++ +A LF M GI+
Sbjct: 302 RMYTTCGSIEGARRVFDNMK----VRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQ 357
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ +T ++ A ++ ++ REIH+ V G D+ +AL+ MY+KCG++KDAR +
Sbjct: 358 PDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQV 417
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ ++V SW+AMIG Y ++G + E F M + + VT I++L+AC H G +
Sbjct: 418 FDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGAL 477
Query: 402 EKGLEIF 408
+ G+EI+
Sbjct: 478 DVGMEIY 484
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 212/464 (45%), Gaps = 53/464 (11%)
Query: 81 LNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKF---TFSIVLKACVGLLDIKKGKQVHA 137
L V ++ F F +G +++ N T+ + + C L D GKQV
Sbjct: 22 LQLPVPSARFRSTFTRRVGANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRD 81
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
Q G + ++ N LI +YS CG + AR++F + + VV+W ++I+GY V V E
Sbjct: 82 HIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKE 141
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP---------- 247
A LF +M EGLEP+ T+ +++ + + N +++ GFV
Sbjct: 142 AFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVS 201
Query: 248 ---------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
D+ T+N M+ G+A+S +A +LF M G+KPN ++
Sbjct: 202 MYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKIS 261
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+L ++ G+ +HA GL D+ ++LI MY+ CGS++ AR +F+ +
Sbjct: 262 FLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMK 321
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+++V SW MI Y ++G ++ + LF M EEG++ + +T + +++AC+ + E
Sbjct: 322 VRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHARE 381
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAF-RNG 462
I S + G +V M + G + +A + +P + ++M GA+ NG
Sbjct: 382 I-HSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENG 440
Query: 463 CNIHGRRDLAVTMGEEFFEMGLR---KPDG--FVMLSNICAADG 501
T E F + R +PDG ++ L N C G
Sbjct: 441 YG---------TEAFETFHLMKRSNIEPDGVTYINLLNACGHLG 475
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 180/555 (32%), Positives = 280/555 (50%), Gaps = 33/555 (5%)
Query: 10 NLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARL 68
+L + L CL K +Q Q+ A + N + KLV + A + AR
Sbjct: 95 HLRLTALRCLRENMRSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQ 154
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
+FD+IP+PN+ + N M A + +++E + F M+ R N FTF +VLK+C +
Sbjct: 155 LFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINA 214
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
+ +G+QVH + GF + VG LIDMYS G + A ++F MFER+VV+WTSMI+G
Sbjct: 215 LIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMING 274
Query: 189 YCNVSKVDEAVVLF-------------------------ERMKLEGLEPNQ--FTYNAII 221
Y + + A LF E KL PN+ +N ++
Sbjct: 275 YILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVL 334
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV-SGI 280
YA G+ A F M ++ +WNA+I G+A + E L FK ML S +
Sbjct: 335 KGYATNGNVEALEGLFEEMPER----NIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDV 390
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
PN+ T+ VL A G++ +G+ +H GL +V+ G+AL+DMY+KCG +++A +
Sbjct: 391 PPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAIS 450
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F K++ SWN +IG H ++ LF +M G + + +T I +L AC+H GL
Sbjct: 451 VFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGL 510
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
VE G F+SM + Y + EHY C+VDML R+GR+ +A +R++P+ +
Sbjct: 511 VEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLL 570
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
C I+ +LA + E+ + P +VMLSNI G W + L+ M++ +K
Sbjct: 571 GACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKK 630
Query: 521 QPGFSRVEKRNEFVE 535
PG S +E + VE
Sbjct: 631 LPGCSLIEVNDAVVE 645
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 167/515 (32%), Positives = 282/515 (54%), Gaps = 51/515 (9%)
Query: 28 ALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
AL G+Q+H + + L N+F + + LV +Y CG +++AR VFD P +V N ++
Sbjct: 154 ALEYGRQLHGHVLKHGLQYNVF-VHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMII 212
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
A G F+E+ F +M + T +VL AC L D++ GK+VH+ E
Sbjct: 213 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVE 272
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+++ + NA+IDMY+ CG + SA +F M RD++SWT+++SG+ N+ ++D
Sbjct: 273 SNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEID--------- 323
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
A +F +M + D V+W AMI G+ +S R
Sbjct: 324 --------------------------VARNYFDKMPEK----DYVSWTAMIDGYIRSNRF 353
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EAL+LF+ M + +KP+ T+ VL A G++++G I + R + D+F +AL
Sbjct: 354 KEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNAL 413
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
IDMY KCG + A ++F ++ +W AMI +G + ++++F ML+ + +E
Sbjct: 414 IDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDE 473
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
+T I VLSAC+H GLV+KG + F M ++G++ + HY C+VD+L R+GR+ EAY+++
Sbjct: 474 ITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIE 533
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG---FVMLSNICAADGE 502
+P+ + + GA GC ++ D+A + ++ E+ +PD +V+L NI AA
Sbjct: 534 NMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILEL---EPDNGAVYVLLCNIYAACKR 590
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFV 534
W++ LR++M +K ++K PG S +E + +EFV
Sbjct: 591 WNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFV 625
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 179/373 (47%), Gaps = 53/373 (14%)
Query: 19 LLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNS----------- 65
+L C K K LR GK+VH+ + C + N+ L++ ++ +YA CG+++S
Sbjct: 246 VLSACSKLKDLRTGKKVHSYVKNCKVESNLV-LENAMIDMYADCGEMDSALGIFRSMNNR 304
Query: 66 --------------------ARLVFDKIPNPNVFMLNWMVMASAF--TGNFQEAIGYFSL 103
AR FDK+P + ++W M + + F+EA+ F
Sbjct: 305 DIISWTTIVSGFTNLGEIDVARNYFDKMPEKDY--VSWTAMIDGYIRSNRFKEALELFRN 362
Query: 104 MREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
M+ + ++FT VL AC L ++ G+ + + +ND+ V NALIDMY KCG
Sbjct: 363 MQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGD 422
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
+ A +F M +RD +WT+MI G ++A+ +F M + P++ TY ++++
Sbjct: 423 VDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSA 482
Query: 224 YARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
G + +F RMT++ G P++ + ++ A++ R EA ++ + M IK
Sbjct: 483 CTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENM---PIKA 539
Query: 283 NNVTVTGVLQAGGLTGSIQIGRE--IHALVCRMGLHIDVFTGSA---LIDMYSKCGSLKD 337
N++ V G L AG ++ RE + +V + L ++ G+ L ++Y+ C D
Sbjct: 540 NSI-VWGALLAG-----CRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWND 593
Query: 338 ARTLFEITRIKNV 350
R L ++ K +
Sbjct: 594 LRELRQMMMDKGI 606
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 13/290 (4%)
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
F + R+ E P+L WN MI G+++ + L+ ML G+KP+ T + +
Sbjct: 89 FQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKG 148
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
+++ GR++H V + GL +VF +AL+ MY CG L AR +F++ +V +W
Sbjct: 149 FTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITW 208
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
N +I Y K G + S LF M ++ + VTL+ VLSACS + G ++ +K
Sbjct: 209 NMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKN 268
Query: 414 -RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV---PMYVTNSMAGAFRNGCNIHGRR 469
+ + E+ ++DM G M A + R + + ++ F N I R
Sbjct: 269 CKVESNLVLEN--AMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVAR 326
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ M E+ + DG++ + EA L + M+ NV+
Sbjct: 327 NYFDKMPEKDYVSWTAMIDGYI-------RSNRFKEALELFRNMQATNVK 369
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 169/563 (30%), Positives = 288/563 (51%), Gaps = 44/563 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L + ALR+GK +H+ + + L++F + + LV Y CG + AR VFD +P
Sbjct: 16 VLNSVVDPDALRKGKFIHSCVRESEHSLDVF-VNTALVNTYTKCGSLTDARKVFDGMPCR 74
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V N M+ A + + EA F M+ RC++ TF +L ACV +++ GK V
Sbjct: 75 SVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVR 134
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ FE D+ VG ALI MY++C +A +VF M ++++++W+++I+ + +
Sbjct: 135 ESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCG 194
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
EA+ F M+ EG+ PN+ T+ NA++
Sbjct: 195 EALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALV 254
Query: 222 ASYAR--RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
Y R G+ + A M + + WN +I+G+ R EAL+ ++ + +
Sbjct: 255 NVYGRCETGELDVAEVILQEMDEQ----QITAWNVLINGYTLHGRSREALETYQRLQLEA 310
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I + VT VL A + S+ G+ IH+ GL DV +AL +MYSKCGS+++AR
Sbjct: 311 IPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENAR 370
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ I++ SWN M+ Y +HG + ++L +M +EG++ N +T +SVLS+CSH G
Sbjct: 371 RIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAG 430
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
L+ +G + F S+ G+++ EHY C+VD+L R+G++ EA + ++P +
Sbjct: 431 LIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASL 490
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C +H D + E+ V+LSNI + G+W A LR+ M + V+
Sbjct: 491 LGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVK 550
Query: 520 KQPGFSRVEKRNEFVEKEVQNES 542
K PG S ++ +N+ E V++ S
Sbjct: 551 KVPGISSIQVKNKVHEFRVRDTS 573
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 160/346 (46%), Gaps = 54/346 (15%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
+ N TF VL + V ++KGK +H+ + DV V AL++ Y+KCG L AR+
Sbjct: 7 KANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARK 66
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG-------------------- 209
VF GM R V +W SMIS Y + EA +F+RM+ EG
Sbjct: 67 VFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPEN 126
Query: 210 ---------------LEPNQFTYNAIIASYAR-RGDSNAAFAFFSRMTAEGFVPDLVTWN 253
E + F A+I YAR R NAA F RM + +L+TW+
Sbjct: 127 LQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAA-QVFGRMKQK----NLITWS 181
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
A+I+ FA EAL+ F+ M GI PN VT +L ++ IH L+
Sbjct: 182 AIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEH 241
Query: 314 GLHIDVFTGSALIDMYSKC--GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
GL +AL+++Y +C G L A + + + + +WN +I Y HG ++E
Sbjct: 242 GLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALE 301
Query: 372 LFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE 406
++R+ E + ++VT ISVL+AC+ H VE GL+
Sbjct: 302 TYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLD 347
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%)
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
ML+ G+K N +T VL + +++ G+ IH+ V +DVF +AL++ Y+KCGS
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
L DAR +F+ ++V +WN+MI Y + +F+RM EG R + VT +S+L A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 395 CSHGGLVEKGLEIFRSMKE 413
C + ++ G + S+ E
Sbjct: 121 CVNPENLQHGKHVRESISE 139
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/478 (32%), Positives = 266/478 (55%), Gaps = 9/478 (1%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMR-EFIY 109
S +V Y G + AR +F+++P NV M+ G ++ G F MR E
Sbjct: 194 SSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFV 253
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
+ N T +++ +AC + K+G Q+H + ++MGFE DV +GNA+I MY + + AR+
Sbjct: 254 KVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARK 313
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD 229
+F M +DVVSW ++I+GY +V+E VLFE+ + + + ++ +I ++ +G
Sbjct: 314 IFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQ----QKDVISWTTMITGFSNKGK 369
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+ F M + D + W A+ISGF + EA+ F ML ++PN +T++
Sbjct: 370 MGKSIELFRMMPKQ----DDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSS 425
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
VL A ++ G +IH LV +MG+ D+ ++L+ MY+KCG++ D +F N
Sbjct: 426 VLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPN 485
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ S+N+MI + ++G + ++ELF +ML EG + NE+T + VLSAC+H GL+E+G F+
Sbjct: 486 IVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFK 545
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
SMK Y ++ HYAC+VD+L R+G + +A DL+R +P + + GA IH R
Sbjct: 546 SMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRL 605
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
D+A ++ F++ + +LS + ++ G ++E +R K V+K G+S +
Sbjct: 606 DVAKLAAQQIFKLEPDNAAPYAVLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWI 663
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 211/452 (46%), Gaps = 76/452 (16%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ--EAIGYFS 102
N S + L Y G + AR +F+K+P N M+ A + EA F+
Sbjct: 61 NAISWTAMLTAYYEN-GHIAKARKMFEKMPQRTTASYNAMITAYTRSNPMMIGEASKLFA 119
Query: 103 LMREFIYRCNKFTFSIVLK--ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSK 160
MRE N +++ ++ A G++D ++++ + T + + + V NALI Y K
Sbjct: 120 EMRE----RNSISYAAMITGLARAGMVD--NAEELY-LETPVEWRDPV-CSNALISGYLK 171
Query: 161 CGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAI 220
G L A R+F GM ERDV+SW+SM+ GYC K+ A LFERM E N T+ A+
Sbjct: 172 VGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMP----ERNVVTWTAM 227
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I + + G F F RM EGFV
Sbjct: 228 IDGHMKMGCYEVGFGLFLRMRKEGFV---------------------------------- 253
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
K N T+T + +A G + G ++H LV RMG DVF G+A+I MY + + +AR
Sbjct: 254 KVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARK 313
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F++ K+V SWNA+I Y ++ V+ LFE+ ++ + ++ ++++ S+ G
Sbjct: 314 IFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDV----ISWTTMITGFSNKGK 369
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA----YDLLRQV----PMYVT 452
+ K +E+FR M ++ + + V+ +G EA ++LR+V P+ ++
Sbjct: 370 MGKSIELFRMMPKQDDIA-----WTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLS 424
Query: 453 NSMAGA-----FRNGCNIHGRRDLAVTMGEEF 479
+ ++ + G IH L V MG EF
Sbjct: 425 SVLSASAGLATLNQGLQIH---TLVVKMGMEF 453
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 157/317 (49%), Gaps = 22/317 (6%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
++ I + + G L A +F M ++ +SWT+M++ Y + +A +FE+M +
Sbjct: 35 HSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMP----Q 90
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
+YNA+I +Y R A S++ AE + +++ AMI+G A++ + A +L
Sbjct: 91 RTTASYNAMITAYTRSNPMMIGEA--SKLFAEMRERNSISYAAMITGLARAGMVDNAEEL 148
Query: 272 FKGMLVSGIKP--NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
+ V P +N ++G L+ G L + +I MG DV + S+++D Y
Sbjct: 149 YLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEG-------MG-ERDVISWSSMVDGY 200
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTL 388
K G + AR LFE +NV +W AMI + K G + LF RM +EG ++ N TL
Sbjct: 201 CKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTL 260
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLR 445
+ ACS G ++G+++ + R G + ++ M CR +VEA +D++
Sbjct: 261 TVMFEACSEFGEYKEGIQM-HGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMN 319
Query: 446 QVPMYVTNSM-AGAFRN 461
+ + N++ AG +N
Sbjct: 320 RKDVVSWNALIAGYVQN 336
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L L QG Q+H L+ + S+++ LV +Y CG+V +F I
Sbjct: 423 LSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSIN 482
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLD 128
+PN+ N M+ A G +EA+ F M + N+ TF VL AC VGLL+
Sbjct: 483 SPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLE 538
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
I + + G LK+A ++F KN SW AM+ Y ++G + + ++FE+M + A+
Sbjct: 38 ITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQR-TTASY 96
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
+I+ + S+ ++ + ++F M+ER + YA ++ L R+G + A +L
Sbjct: 97 NAMITAYTR-SNPMMIGEASKLFAEMRERNSIS-----YAAMITGLARAGMVDNAEELYL 150
Query: 446 QVPMYVTNSM-AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+ P+ + + + A +G GR + A + F MG R + + + G+
Sbjct: 151 ETPVEWRDPVCSNALISGYLKVGRLEEATRI---FEGMGERDVISWSSMVDGYCKKGKIG 207
Query: 505 EAENLRKIMKEKNV 518
A L + M E+NV
Sbjct: 208 HARELFERMPERNV 221
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/531 (33%), Positives = 281/531 (52%), Gaps = 41/531 (7%)
Query: 34 QVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTG 92
++HAL+ T + +KL+ YA G + SAR VFDK P V N M++A + G
Sbjct: 25 KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84
Query: 93 NFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGN 152
EA+ + M R + T+++VLKAC LD++ G++ A G+ +DV VG
Sbjct: 85 AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144
Query: 153 ALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEP 212
A++++Y+KCG + A RVF M RD+V WT+MI+G + EAV ++ +M + +E
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204
Query: 213 NQ-----------------------------------FTYNAIIASYARRGDSNAAFAFF 237
+ +++ YA+ G A F
Sbjct: 205 DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVF 264
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
RM ++++W+A+ISGFAQ+ AL+L M G KP++V++ VL A
Sbjct: 265 RRM----LYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQV 320
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
G +++G+ +H + R LH D + +A+IDMYSKCGSL ART+F+ ++ SWNA+I
Sbjct: 321 GFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAII 379
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
YG HG + ++ LF +M E ++ + T S+LSA SH GLVEKG F M Y +
Sbjct: 380 ASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKI 439
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
+ S++HYAC+VD+L R+GR+ EA +L+ + ++ A +GC HG+ + +
Sbjct: 440 QPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAK 499
Query: 478 EFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ E+ P + ++SN A W E +RKIMK+ ++K PG+S +E
Sbjct: 500 KVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVME 550
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 276/504 (54%), Gaps = 48/504 (9%)
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ +VF N ++ A +G+ EA+ FS MR+ + +F +KAC L DI G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
KQ H A G+++D+ V +ALI MYS CG L AR+VF + +R++VSWTSMI GY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 193 SKVDEAVVLFE----------------------------RMKLEGLEPNQFTY------- 217
+AV LF+ R+ +GL + ++
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 218 ------NAIIASYARRGDSNAAFA--FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
N ++ +YA+ G+ A A F ++ + D V++N+++S +AQS NEA
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK----DRVSYNSIMSVYAQSGMSNEAF 271
Query: 270 KLFKGMLVSGIKP-NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
++F+ ++ + + N +T++ VL A +G+++IG+ IH V RMGL DV G+++IDM
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y KCG ++ AR F+ + KNV SW AMI YG HG ++ELF M++ G+R N +T
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+SVL+ACSH GL +G F +MK R+GV+ EHY C+VD+L R+G + +AYDL++++
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
M + + + C IH +LA FE+ +++LS+I A G W + E
Sbjct: 452 MKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVER 511
Query: 509 LRKIMKEKNVQKQPGFSRVEKRNE 532
+R IMK + + K PGFS +E E
Sbjct: 512 VRMIMKNRGLVKPPGFSLLELNGE 535
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 181/412 (43%), Gaps = 63/412 (15%)
Query: 18 CLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C + C + GKQ H A + +IF + S L+ +Y+ CG + AR VFD+IP
Sbjct: 81 CAIKACSSLFDIFSGKQTHQQAFVFGYQSDIF-VSSALIVMYSTCGKLEDARKVFDEIPK 139
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNK-----FTFSI----VLKACVGL 126
N+ M+ GN +A+ SL ++ + N F S+ V+ AC +
Sbjct: 140 RNIVSWTSMIRGYDLNGNALDAV---SLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL--LCSARRVFHGMFERDVVSWTS 184
+ +H+ + GF+ VSVGN L+D Y+K G + AR++F + ++D VS+ S
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 185 MISGYCNVSKVDEAVVLFERMKLE------------------------------------ 208
++S Y +EA +F R+
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
GLE + +II Y + G A F RM + ++ +W AMI+G+ +A
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK----NVRSWTAMIAGYGMHGHAAKA 372
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTG-SIQIGREIHALVCRMGLHIDVFTGSALID 327
L+LF M+ SG++PN +T VL A G ++ R +A+ R G+ + ++D
Sbjct: 373 LELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVD 432
Query: 328 MYSKCGSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVD----SSIELFE 374
+ + G L+ A L + ++K + W++++ H V+ S LFE
Sbjct: 433 LLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFE 484
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/478 (32%), Positives = 266/478 (55%), Gaps = 9/478 (1%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMR-EFIY 109
S +V Y G + AR +F+++P NV M+ G ++ G F MR E
Sbjct: 273 SSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFV 332
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
+ N T +++ +AC + K+G Q+H + ++MGFE DV +GNA+I MY + + AR+
Sbjct: 333 KVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARK 392
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD 229
+F M +DVVSW ++I+GY +V+E VLFE+ + + + ++ +I ++ +G
Sbjct: 393 IFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQ----QKDVISWTTMITGFSNKGK 448
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+ F M + D + W A+ISGF + EA+ F ML ++PN +T++
Sbjct: 449 MGKSIELFRMMPKQ----DDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSS 504
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
VL A ++ G +IH LV +MG+ D+ ++L+ MY+KCG++ D +F N
Sbjct: 505 VLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPN 564
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ S+N+MI + ++G + ++ELF +ML EG + NE+T + VLSAC+H GL+E+G F+
Sbjct: 565 IVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFK 624
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
SMK Y ++ HYAC+VD+L R+G + +A DL+R +P + + GA IH R
Sbjct: 625 SMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRL 684
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
D+A ++ F++ + +LS + ++ G ++E +R K V+K G+S +
Sbjct: 685 DVAKLAAQQIFKLEPDNAAPYAVLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWI 742
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 211/452 (46%), Gaps = 76/452 (16%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ--EAIGYFS 102
N S + L Y G + AR +F+K+P N M+ A + EA F+
Sbjct: 140 NAISWTAMLTAYYEN-GHIAKARKMFEKMPQRTTASYNAMITAYTRSNPMMIGEASKLFA 198
Query: 103 LMREFIYRCNKFTFSIVLK--ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSK 160
MRE N +++ ++ A G++D ++++ + T + + + V NALI Y K
Sbjct: 199 EMRE----RNSISYAAMITGLARAGMVD--NAEELY-LETPVEWRDPV-CSNALISGYLK 250
Query: 161 CGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAI 220
G L A R+F GM ERDV+SW+SM+ GYC K+ A LFERM E N T+ A+
Sbjct: 251 VGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMP----ERNVVTWTAM 306
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I + + G F F RM EGFV
Sbjct: 307 IDGHMKMGCYEVGFGLFLRMRKEGFV---------------------------------- 332
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
K N T+T + +A G + G ++H LV RMG DVF G+A+I MY + + +AR
Sbjct: 333 KVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARK 392
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F++ K+V SWNA+I Y ++ V+ LFE+ ++ + ++ ++++ S+ G
Sbjct: 393 IFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDV----ISWTTMITGFSNKGK 448
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA----YDLLRQV----PMYVT 452
+ K +E+FR M ++ + + V+ +G EA ++LR+V P+ ++
Sbjct: 449 MGKSIELFRMMPKQDDIA-----WTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLS 503
Query: 453 NSMAGA-----FRNGCNIHGRRDLAVTMGEEF 479
+ ++ + G IH L V MG EF
Sbjct: 504 SVLSASAGLATLNQGLQIH---TLVVKMGMEF 532
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 155/314 (49%), Gaps = 22/314 (7%)
Query: 155 IDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ 214
I + + G L A +F M ++ +SWT+M++ Y + +A +FE+M +
Sbjct: 117 ITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMP----QRTT 172
Query: 215 FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
+YNA+I +Y R A S++ AE + +++ AMI+G A++ + A +L+
Sbjct: 173 ASYNAMITAYTRSNPMMIGEA--SKLFAEMRERNSISYAAMITGLARAGMVDNAEELYLE 230
Query: 275 MLVSGIKP--NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
V P +N ++G L+ G L + +I MG DV + S+++D Y K
Sbjct: 231 TPVEWRDPVCSNALISGYLKVGRLEEATRIFEG-------MG-ERDVISWSSMVDGYCKK 282
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISV 391
G + AR LFE +NV +W AMI + K G + LF RM +EG ++ N TL +
Sbjct: 283 GKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVM 342
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVP 448
ACS G ++G+++ + R G + ++ M CR +VEA +D++ +
Sbjct: 343 FEACSEFGEYKEGIQM-HGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKD 401
Query: 449 MYVTNSM-AGAFRN 461
+ N++ AG +N
Sbjct: 402 VVSWNALIAGYVQN 415
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L L QG Q+H L+ + S+++ LV +Y CG+V +F I
Sbjct: 502 LSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSIN 561
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLD 128
+PN+ N M+ A G +EA+ F M + N+ TF VL AC VGLL+
Sbjct: 562 SPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLE 617
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
I + + G LK+A ++F KN SW AM+ Y ++G + + ++FE+M + A+
Sbjct: 117 ITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQR-TTASY 175
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
+I+ + S+ ++ + ++F M+ER + YA ++ L R+G + A +L
Sbjct: 176 NAMITAYTR-SNPMMIGEASKLFAEMRERNSIS-----YAAMITGLARAGMVDNAEELYL 229
Query: 446 QVPMYVTNSM-AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+ P+ + + + A +G GR + A + F MG R + + + G+
Sbjct: 230 ETPVEWRDPVCSNALISGYLKVGRLEEATRI---FEGMGERDVISWSSMVDGYCKKGKIG 286
Query: 505 EAENLRKIMKEKNV 518
A L + M E+NV
Sbjct: 287 HARELFERMPERNV 300
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/546 (32%), Positives = 297/546 (54%), Gaps = 50/546 (9%)
Query: 27 KALRQGKQVHA----LLCTNDLNIFSLKSKLVGVYAGCGDVNS--ARLVFDKIPNPNVFM 80
K+++ KQ+HA + + D + ++ ++L + A ++ A + ++ PN+ +
Sbjct: 33 KSIKGLKQIHASIIKTMPSPDAQL-TISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPL 91
Query: 81 LNWMV--MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
N ++ +A++ + + + Y ++ + I N +T VLKAC +++G++VH
Sbjct: 92 YNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDN-YTIPFVLKACAESRAVREGEEVHGQ 150
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
A +MG +DV V N L+ MY+ C ++ SAR+VF +RD+VSWT+MI GY + E
Sbjct: 151 AIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREG 210
Query: 199 VVLFERMKLEGLEPNQFTY------------------------------------NAIIA 222
V LF M E L+ + T NA++
Sbjct: 211 VGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVD 270
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y + GD+N A F M V ++V+WN+MISG AQ + E+L +F+ M G+KP
Sbjct: 271 MYLKCGDANFARKVFQEMP----VKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKP 326
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
++VT+ VL + G +++G+ +HA + R + D F G+AL+DMY+KCGS+ A +F
Sbjct: 327 DDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVF 386
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ K+V S+ AMI HG +++LF M + G+ +EVT + VL+ACSH GLVE
Sbjct: 387 QAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVE 446
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G + F M Y ++ EHY C+VD+L R+G + EA + +R +P+ + GA
Sbjct: 447 EGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGA 506
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IHG+ +L ++ ++ ++ RK +V++SNI ++ W +A LRK MKE+N++K P
Sbjct: 507 CKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTP 566
Query: 523 GFSRVE 528
G S +E
Sbjct: 567 GCSSIE 572
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 193/428 (45%), Gaps = 66/428 (15%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C +S+A+R+G++VH L + + + L+ +YA C + SAR VFD P +
Sbjct: 131 VLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRD 190
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ M+ G +E +G F M + + T IVL +C L D++ G+++H
Sbjct: 191 LVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHR 250
Query: 138 VATQMGFEN-DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ N DV VGNAL+DMY KCG AR+VF M ++VVSW SMISG +
Sbjct: 251 YIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFK 310
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGD---SNAAFAFFSR--MTAEGFV----- 246
E++ +F +M+ G++P+ T A++ S A G A+ R + A+GF+
Sbjct: 311 ESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALV 370
Query: 247 ---------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
D+ ++ AMI G A + +AL LF M GI+P+ V
Sbjct: 371 DMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEV 430
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T GVL A G ++ GR+ +D T++ +
Sbjct: 431 TFVGVLTACSHVGLVEEGRKY----------------------------FEDMSTIYNLR 462
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
+ + M+ G+ G+++ + E M + + L ++L AC G VE G
Sbjct: 463 --PQLEHYGCMVDLLGRAGLINEAEEFIRNM---PIEPDAFVLGALLGACKIHGKVELGE 517
Query: 406 EIFRSMKE 413
+ + +++
Sbjct: 518 SVMKKIEK 525
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 168/338 (49%), Gaps = 13/338 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN---DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C + LR G+++H + N +L++F + + LV +Y CGD N AR VF ++P
Sbjct: 232 VLSSCARLGDLRLGRKLHRYIIRNSNVNLDVF-VGNALVDMYLKCGDANFARKVFQEMPV 290
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
NV N M+ A G F+E++ F M+ + + T VL +C L ++ GK V
Sbjct: 291 KNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWV 350
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA + D +GNAL+DMY+KCG + A VF M +DV S+T+MI G +
Sbjct: 351 HAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQG 410
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM-TAEGFVPDLVTWNA 254
+A+ LF M G+EP++ T+ ++ + + G +F M T P L +
Sbjct: 411 GKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGC 470
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M+ ++ NEA + + M I+P+ + +L A + G +++G + + ++
Sbjct: 471 MVDLLGRAGLINEAEEFIRNM---PIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIE 527
Query: 315 LHIDVFTGSALI--DMYSKCGSLKDARTLFEITRIKNV 350
D G+ ++ ++YS +DA L + + +N+
Sbjct: 528 PRKD---GAYVLMSNIYSSANRWRDALKLRKTMKERNL 562
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 169/562 (30%), Positives = 296/562 (52%), Gaps = 45/562 (8%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFD-- 71
L +L C ++ G+ +H + N N+F + + LV +YA C V+ A +F
Sbjct: 165 LGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVV-TGLVDMYAKCKCVSEAEFLFKGL 223
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+ N + MV A G+ +A+ +F M CN++TF +L AC +L
Sbjct: 224 EFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCF 283
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G+QVH + GF ++V V +AL+DMY+KCG L +A+ + M + DVVSW S++ G+
Sbjct: 284 GEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVR 343
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY---------------------------------N 218
+EA+ LF+ M ++ + +T+ N
Sbjct: 344 HGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSN 403
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A++ YA+ GD + A+ F +M + D+++W ++++G+AQ+ E+LK+F M V+
Sbjct: 404 ALVDMYAKTGDMDCAYTVFEKMLEK----DVISWTSLVTGYAQNNSHEESLKIFCDMRVT 459
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G+ P+ V +L A ++ G+++H + GL ++L+ MY+KCG L DA
Sbjct: 460 GVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDA 519
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+F ++K+V +W A+I Y ++G +S++ ++ M+ G R + +T I +L ACSH
Sbjct: 520 DAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHA 579
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLV++G + F+ M + YG+K EHYAC++D+ RSG++ EA LL Q+ + ++ +
Sbjct: 580 GLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKS 639
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
+ C +H +LA FE+ +VMLSN+ +A +W++ +RK+MK K +
Sbjct: 640 LLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGI 699
Query: 519 QKQPGFSRVE---KRNEFVEKE 537
K+PG S +E + N F+ +
Sbjct: 700 VKEPGCSWLEINSRVNTFISDD 721
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 219/476 (46%), Gaps = 76/476 (15%)
Query: 33 KQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTG 92
+ +H + +I+ ++L+ + G VN AR +FDK+P + + N M+ + G
Sbjct: 52 RSIHTTTAASYESIYQ-TNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVG 110
Query: 93 NFQEA-------------------IGY------------FSLMREFIYRCNKFTFSIVLK 121
EA GY F MR ++ ++FT VL+
Sbjct: 111 RLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLR 170
Query: 122 ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FER-DV 179
C L I+ G+ +H + GFE +V V L+DMY+KC + A +F G+ F+R +
Sbjct: 171 VCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNH 230
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS---------------- 223
V WT+M++GY +AV F M +G+E NQ+T+ I+ +
Sbjct: 231 VLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGF 290
Query: 224 -------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
YA+ GD A M + D+V+WN+++ GF +
Sbjct: 291 IVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDD----DVVSWNSLMVGFVRHGL 346
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
E EAL+LFK M +K ++ T VL + GSI + +H L+ + G +A
Sbjct: 347 EEEALRLFKNMHGRNMKIDDYTFPSVLNC-CVVGSIN-PKSVHGLIIKTGFENYKLVSNA 404
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+DMY+K G + A T+FE K+V SW +++ Y ++ + S+++F M G+ +
Sbjct: 405 LVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPD 464
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ + S+LSAC+ L+E G ++ + G++ S+ Y +V M + G + +A
Sbjct: 465 QFIVASILSACAELTLLEFGKQVHLDFI-KSGLRWSQSVYNSLVAMYAKCGCLDDA 519
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 71/362 (19%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE-------- 203
N L++ SK G + AR++F M ++D SW +MIS Y NV ++ EA LF+
Sbjct: 69 NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 128
Query: 204 -----------------------RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
M+LEG + +QFT +++ + G +
Sbjct: 129 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 188
Query: 241 TAEGFVPDL---------------------------------VTWNAMISGFAQSKRENE 267
GF ++ V W AM++G+AQ+ +
Sbjct: 189 VKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYK 248
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
A++ F+ M G++ N T +L A + G ++H + + G +V+ SAL+D
Sbjct: 249 AVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVD 308
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MY+KCG LK+A+ + E +V SWN+++ + +HG+ + ++ LF+ M M+ ++ T
Sbjct: 309 MYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYT 368
Query: 388 LISVLSACSHGGLVEKGLE--IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
SVL+ C G + K + I ++ E Y + + +VDM ++G M AY +
Sbjct: 369 FPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSN-----ALVDMYAKTGDMDCAYTVFE 423
Query: 446 QV 447
++
Sbjct: 424 KM 425
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 146/302 (48%), Gaps = 48/302 (15%)
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
+V++A LF++M + +++++N +I+SY G A F + + +TW+
Sbjct: 80 QVNDARKLFDKMP----QKDEYSWNTMISSYVNVGRLVEARELFDGCSCKS----SITWS 131
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
++ISG+ + + EA LF+ M + G K + T+ VL+ G IQ G IH V +
Sbjct: 132 SIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKN 191
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLF---EITRIKNVASWNAMIGCYGKHGMVDSSI 370
G +VF + L+DMY+KC + +A LF E R KN W AM+ Y ++G ++
Sbjct: 192 GFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDR-KNHVLWTAMVTGYAQNGDGYKAV 250
Query: 371 ELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLEIFRSMKERYGVKI 419
E F M +G+ N+ T ++L+ACS HG +V+ G +G +
Sbjct: 251 EFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSG----------FGSNV 300
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQV---PMYVTNS-MAGAFRNGC---------NIH 466
+ + +VDM + G + A ++L + + NS M G R+G N+H
Sbjct: 301 YVQ--SALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMH 358
Query: 467 GR 468
GR
Sbjct: 359 GR 360
>gi|413944103|gb|AFW76752.1| hypothetical protein ZEAMMB73_846363 [Zea mays]
Length = 562
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 295/555 (53%), Gaps = 53/555 (9%)
Query: 19 LLGKCMKSKALRQGKQVH--ALLCTN----DLNIFSLKSKLVGVYAGCGDVNSARLVFDK 72
LL M + A RQGK VH A++ ++ DL+ L +KLV Y+ GDV +AR VFD
Sbjct: 17 LLQSSMGANAFRQGKSVHHRAIITSSASPPDLH---LNTKLVIFYSHFGDVAAARRVFDG 73
Query: 73 IPNPNVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+P+ +V ++W M S + N QEA+ F+ M R N+FTF ++AC G +
Sbjct: 74 MPHRSV--VSWTAMVSGYAKNSRPQEALDLFAFMLRSGARPNQFTFGSAVRACTGARCAR 131
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
G+Q+HA A + F D+ V +AL+DM+ +CG + ARR+F M +D+VSW S++ G+
Sbjct: 132 SGEQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMRGFV 191
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYN-------------------------------- 218
++A+ LF+ M +G+ P+ FT+
Sbjct: 192 EREHCNDALGLFDSMLRDGMLPDHFTFGSALKACGAISVLFNVELIHACIIKLGYWDENV 251
Query: 219 ---AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR-ENEALKLFKG 274
++I SYA+ ++A + M PDLV+ A+ISG++ + ++A+KLF
Sbjct: 252 AIASLIDSYAKCRSLSSARVIYDSMCE----PDLVSSTALISGYSMDRNYSDDAMKLFCK 307
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
+ G++ + + ++ +L SI+ G +IHA + + D+ +AL+DMY+K G
Sbjct: 308 IHRKGLRIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGE 367
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
D+R F+ +NV SW ++I +HG + ++ LF RM E+G++ N+VT +S+LSA
Sbjct: 368 FLDSRRAFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSA 427
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS 454
CSH G++ KG+E F SM +YG+ +HY+ VD+L R G++ +A+ L++ +S
Sbjct: 428 CSHSGMMNKGMEYFTSMMSKYGIDPRFKHYSSAVDLLARGGQLEDAWMLVQNTNTECKSS 487
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMK 514
M G C +HG L T + + + +L+N+ A W +A+ RK++
Sbjct: 488 MYGTMLGACKVHGNMPLGETAAKNLLSIDPESSVNYAVLANMYAESHLWEDAQRTRKLLV 547
Query: 515 EKNVQKQPGFSRVEK 529
E + K+ GFS + +
Sbjct: 548 ETSKGKEAGFSVISR 562
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L LLG C +++ G Q+HA + + +L + LV +YA G+ +R FD++P
Sbjct: 320 LSSLLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEFLDSRRAFDEMP 379
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N NV ++ + A G ++A+ F+ M E + N TF +L AC + KG +
Sbjct: 380 NRNVISWTSLITSCAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGMMNKGME 439
Query: 135 -VHAVATQMGFENDVSVGNALIDMYSKCGLL 164
++ ++ G + ++ +D+ ++ G L
Sbjct: 440 YFTSMMSKYGIDPRFKHYSSAVDLLARGGQL 470
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/589 (31%), Positives = 298/589 (50%), Gaps = 82/589 (13%)
Query: 16 LDC-----LLGKCMKSKALRQGKQVHALLCTNDLNIFS------LKSKLVGVYAGCGDVN 64
LDC LL + + Q KQ+HA L +FS L SKLV +Y+ +
Sbjct: 22 LDCGIYGHLLHHLTELRLPLQAKQLHARLI-----LFSVTPENYLASKLVALYSKTNHLA 76
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
AR VFD+IP+ N F N M+++ + +A+ FS + N + + +LK+
Sbjct: 77 FARYVFDQIPHKNTFSYNAMLISYSLHNRHGDALDLFSSLASS-NLVNNISITCLLKSLS 135
Query: 125 G--LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
L D+K GK+VH + GF+ DV V NALI YSKC L +R+VF M +RDVVSW
Sbjct: 136 SFTLSDVKLGKEVHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSW 195
Query: 183 TSMISGYCNVSKVDEAVVLFERM-KLEGLEPNQFTY------------------------ 217
SMISGY ++ L+ M G PN T
Sbjct: 196 NSMISGYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIV 255
Query: 218 -----------NAIIASYARRGDSNAAFAFFSRMTAE---------------GFVPD--- 248
NA+I YA+ G + A F M+ + G+V
Sbjct: 256 DNQVEIDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLE 315
Query: 249 ---------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
L TWNA+I+G Q+ R L L + M G +PN VT++ VL S
Sbjct: 316 LFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSS 375
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
++ G+EIH+ ++G H +++ +A+IDMY+K G L+ A+ +F+ ++ +++ W A+I
Sbjct: 376 LKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISA 435
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
Y HG + ++ LF ML++G++ + VT +VL+AC+H G+V+K EIF SM ++YG++
Sbjct: 436 YAVHGDANLALGLFHEMLKQGIQPDPVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQP 495
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEF 479
EHYACVV L ++ R+ EA + + ++P+ + + GA +G +I +L ++ +
Sbjct: 496 LVEHYACVVGALGKARRLSEAKEFVSKMPIEPSAKVWGALLHGASISSDVELGKSVCDYL 555
Query: 480 FEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
FE+ +V+++N+ + G W EA+ +R+ M + +QK PG S +E
Sbjct: 556 FEIEPENTGNYVIMANLYSQAGRWKEADEVRERMNKVGLQKIPGSSWIE 604
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/536 (31%), Positives = 285/536 (53%), Gaps = 38/536 (7%)
Query: 31 QGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
+G QVH ++ N L+ + + L+ +Y CG+V AR++FDK +V N M+ A
Sbjct: 216 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 275
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
G EA+G F MR R ++ +F+ ++K C L +++ +Q+H + GF D +
Sbjct: 276 ANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQN 335
Query: 150 VGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
+ AL+ YSKC + A R+F F +VVSWT+MISG+ +EAV LF MK +
Sbjct: 336 IRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRK 395
Query: 209 GLEPNQFTYN-------------------------------AIIASYARRGDSNAAFAFF 237
G+ PN+FTY+ A++ +Y + G + A F
Sbjct: 396 GVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVF 455
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA-GGL 296
S + + D+V W+AM++G+AQ+ A+K+F + G+KPN T + +L
Sbjct: 456 SGIDNK----DIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAAT 511
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
T S+ G++ H + L + SAL+ MY+K G ++ A +F+ R K++ SWN+M
Sbjct: 512 TASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSM 571
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I Y +HG ++++F+ M + ++ + VT I V +AC+H GLVE+G + F M
Sbjct: 572 ISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 631
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
+ +KEH +C+VD+ R+G++ +A ++ +P +++ C +H + +L
Sbjct: 632 IAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAA 691
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
E+ M +V+LSN+ A G+W E +RK+M E+NV+K+PG+S +E +N+
Sbjct: 692 EKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNK 747
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 219/481 (45%), Gaps = 52/481 (10%)
Query: 61 GDVNSARL-----VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFT 115
G +S+RL +FDK P+ + ++ + G QEA F ++ +
Sbjct: 40 GAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSI 99
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
FS VLK L D G+Q+H + GF +DVSVG +L+D Y K R VF M
Sbjct: 100 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMK 159
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
ER+VV+WT++ISGY S +E + LF RM+ EG +PN FT+ A + A G
Sbjct: 160 ERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQ 219
Query: 236 FFSRMTAEGF-------------------------------VPDLVTWNAMISGFAQSKR 264
+ + G V +VTWN+MISG+A +
Sbjct: 220 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 279
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+ EAL +F M ++ ++ + + +++ ++ ++H V + G D +A
Sbjct: 280 DLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTA 339
Query: 325 LIDMYSKCGSLKDARTLFEITR-IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
L+ YSKC ++ DA LF+ T + NV SW AMI + ++ + ++ LF M +G+R
Sbjct: 340 LMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRP 399
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
NE T +L+A E ++ ++ ER S ++D + G++ EA +
Sbjct: 400 NEFTYSVILTALPVISPSEVHAQVVKTNYER-----SSTVGTALLDAYVKLGKVDEAAKV 454
Query: 444 LRQV---PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICA 498
+ + ++M + G + A+ + E + G+ KP+ F S N+CA
Sbjct: 455 FSGIDNKDIVAWSAMLAGYAQA----GETEAAIKIFSELTKGGV-KPNEFTFSSILNVCA 509
Query: 499 A 499
A
Sbjct: 510 A 510
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 196/404 (48%), Gaps = 49/404 (12%)
Query: 32 GKQVH-ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
G+Q+H + L+ S+ + LV Y + R VFD++ NV + W + S +
Sbjct: 116 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNV--VTWTTLISGY 173
Query: 91 TGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK----KGKQVHAVATQMGF 144
N +E + F M++ + N FTF+ A +G+L + +G QVH V + G
Sbjct: 174 ARNSLNEEVLTLFMRMQDEGTQPNSFTFA----AALGVLAEEGVGGRGLQVHTVVVKNGL 229
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+ + V N+LI++Y KCG + AR +F + VV+W SMISGY EA+ +F
Sbjct: 230 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 289
Query: 205 MKLEGLEPNQFTYNAII-------------------ASYARRGDSNAAFAF---FSRMTA 242
M+L + ++ ++ +II Y D N A +S+ A
Sbjct: 290 MRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMA 349
Query: 243 ----------EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
GF+ ++V+W AMISGF Q+ + EA+ LF M G++PN T + +L
Sbjct: 350 MLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILT 409
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A + E+HA V + G+AL+D Y K G + +A +F K++ +
Sbjct: 410 ALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVA 465
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
W+AM+ Y + G +++I++F + + G++ NE T S+L+ C+
Sbjct: 466 WSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCA 509
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 278/521 (53%), Gaps = 44/521 (8%)
Query: 50 KSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYF-SLMRE 106
++ L+ +Y G + A VF I + +++W M + FT G EA+ F + R+
Sbjct: 219 QNALISMYTKFGQIAHASDVFTMISTKD--LISWASMITGFTQLGYEIEALYLFRDMFRQ 276
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
+Y+ N+F F V AC LL + G+Q+ + + G +V G +L DMY+K G L S
Sbjct: 277 GVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPS 336
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------- 217
A+R F+ + D+VSW ++I+ N S V+EA+ F +M GL P+ T+
Sbjct: 337 AKRAFYQIESPDLVSWNAIIAALAN-SDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGS 395
Query: 218 --------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
N+++ Y + + + AF F ++ G +LV+
Sbjct: 396 PMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENG---NLVS 452
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
WNA++S +Q K+ EA +LFK ML S KP+N+T+T +L S+++G ++H
Sbjct: 453 WNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSV 512
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
+ GL +DV + LIDMY+KCG LK AR +F+ T+ ++ SW+++I Y + G+ ++
Sbjct: 513 KSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALN 572
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LF M G++ NEVT + VLSACSH GLVE+G ++ +M+ G+ ++EH +C+VD+L
Sbjct: 573 LFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLL 632
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
R+G + EA + +++ +M C HG D+A E ++ V
Sbjct: 633 ARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALV 692
Query: 492 MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+LSNI A+ G W E LR +MK+ VQK PG S +E +++
Sbjct: 693 LLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQ 733
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 233/463 (50%), Gaps = 50/463 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALL----CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L+ C ++L+ GK++H + C DL L++ ++ +Y CG + AR FD +
Sbjct: 86 LILACTNVRSLKYGKRIHDHILKSNCQPDL---VLQNHILNMYGKCGSLKDARKAFDTMQ 142
Query: 75 NPNVFMLNWMVMASAFTGNFQE---AIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+V ++W +M S ++ N QE I Y ++R Y ++ TF ++KAC DI
Sbjct: 143 LRSV--VSWTIMISGYSQNGQENDAIIMYIQMLRSG-YFPDQLTFGSIIKACCIAGDIDL 199
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G Q+H + G+++ + NALI MY+K G + A VF + +D++SW SMI+G+
Sbjct: 200 GGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQ 259
Query: 192 VSKVDEAVVLFERMKLEGL-EPNQFTYNAIIAS--------YARR--------------- 227
+ EA+ LF M +G+ +PN+F + ++ ++ + R+
Sbjct: 260 LGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVF 319
Query: 228 -----GDSNAAFAFFS---RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
D A F F R + PDLV+WNA+I+ A S NEA+ F M+ G
Sbjct: 320 AGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSDV-NEAIYFFCQMIHMG 378
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ P+++T +L A G ++ G +IH+ + +MGL ++L+ MY+KC +L DA
Sbjct: 379 LMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAF 438
Query: 340 TLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+F +I+ N+ SWNA++ +H + LF+ ML + + +T+ ++L C+
Sbjct: 439 NVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAEL 498
Query: 399 GLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+E G ++ S+K V +S + ++DM + G + A
Sbjct: 499 VSLEVGNQVHCFSVKSGLVVDVSVSNR--LIDMYAKCGLLKHA 539
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 204/444 (45%), Gaps = 54/444 (12%)
Query: 93 NFQEAIGYFSL-MREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
+++EA+ F+ ++ + T+ ++ AC + +K GK++H + + D+ +
Sbjct: 59 HYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQ 118
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N +++MY KCG L AR+ F M R VVSWT MISGY + ++A++++ +M G
Sbjct: 119 NHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYF 178
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF-------------------------- 245
P+Q T+ +II + GD + + G+
Sbjct: 179 PDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDV 238
Query: 246 -----VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI-KPNNVTVTGVLQAGGLTGS 299
DL++W +MI+GF Q E EAL LF+ M G+ +PN V A
Sbjct: 239 FTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLK 298
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
+ GR+I + + GL +VF G +L DMY+K G L A+ F ++ SWNA+I
Sbjct: 299 PEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAA 358
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
V+ +I F +M+ G+ +++T +++L AC + +G++I Y +K+
Sbjct: 359 LANSD-VNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQI-----HSYIIKM 412
Query: 420 SKEHYACVVD----MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTM 475
+ A V + M + + +A+++ + + A + C+ H +
Sbjct: 413 GLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQP------ 466
Query: 476 GEEF--FEMGL---RKPDGFVMLS 494
GE F F++ L KPD + +
Sbjct: 467 GEAFRLFKLMLFSENKPDNITITT 490
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 165/339 (48%), Gaps = 21/339 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C L QG Q+H+ + L+ + ++ + L+ +Y C +++ A VF I + N
Sbjct: 389 LLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDI-SEN 447
Query: 78 VFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+++W + SA + + Q EA F LM + + T + +L C L+ ++ G QV
Sbjct: 448 GNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQV 507
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + + G DVSV N LIDMY+KCGLL AR VF D+VSW+S+I GY
Sbjct: 508 HCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLG 567
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNA 254
EA+ LF M+ G++PN+ TY ++++ + G + ++ M E G P +
Sbjct: 568 QEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSC 627
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M+ A++ EA K +G P+ +L + G++ I +
Sbjct: 628 MVDLLARAGCLYEAENFIKK---TGFDPDITMWKTLLASCKTHGNVDIAERAAENI---- 680
Query: 315 LHIDVFTGSALI---DMYSKCGSLKDARTLFEITRIKNV 350
L +D +AL+ ++++ G+ K E+ R++N+
Sbjct: 681 LKLDPSNSAALVLLSNIHASAGNWK------EVARLRNL 713
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 175/383 (45%), Gaps = 38/383 (9%)
Query: 32 GKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G+Q+ + L N+F+ L +YA G + SA+ F +I +P++ N ++ A A
Sbjct: 302 GRQIQGMCAKFGLGRNVFA-GCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALA 360
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
+ EAI +F M + TF +L AC + + +G Q+H+ +MG + +
Sbjct: 361 -NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAA 419
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFER-DVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
V N+L+ MY+KC L A VF + E ++VSW +++S + EA LF+ M
Sbjct: 420 VCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFS 479
Query: 209 GLEPNQFTYNAIIASYARR-----GDSNAAFAFFSRMTAEGFV----------------- 246
+P+ T I+ + A G+ F+ S + + V
Sbjct: 480 ENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHA 539
Query: 247 ---------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
PD+V+W+++I G+AQ EAL LF+ M G++PN VT GVL A
Sbjct: 540 RYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHI 599
Query: 298 GSIQIGREIH-ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI-KNVASWNA 355
G ++ G ++ + +G+ S ++D+ ++ G L +A + T ++ W
Sbjct: 600 GLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKT 659
Query: 356 MIGCYGKHGMVDSSIELFERMLE 378
++ HG VD + E +L+
Sbjct: 660 LLASCKTHGNVDIAERAAENILK 682
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 284/532 (53%), Gaps = 32/532 (6%)
Query: 32 GKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
G+Q+H + L+ ++ + LV VY CG V +R VFD+I N N ++ + A+
Sbjct: 128 GRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAY 187
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
Q+A+ F LM + + N TFS +L V L GK++H + + G E+D+ V
Sbjct: 188 LERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFV 247
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
NALIDMY+K G A VF+ + E+++VSW +M++ + AV L +M+ +G
Sbjct: 248 ANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGE 307
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL--------------------- 249
PN T+ ++ + AR G +R G DL
Sbjct: 308 IPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARR 367
Query: 250 ---------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI 300
V++N +I G++Q+ +E+L+LF M + G+K + V+ GV+ A ++
Sbjct: 368 VFKISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAAL 427
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY 360
+ G+E+H L R LH +F +AL+D Y KCG + A +F ++ ASWN+MI Y
Sbjct: 428 KQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGY 487
Query: 361 GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKIS 420
G G + +I LFE M E+G+ + V+ I+VLSACSHGGLVE+G + F M+ + +K +
Sbjct: 488 GMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQ-NIKPT 546
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF 480
+ HYAC+VD+L R+G + EA L+ +P+ ++ GA C IHG +LA E F
Sbjct: 547 QMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLF 606
Query: 481 EMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
++ + + +LSN+ A G+W EA +RK+MK + +K PG S V+ N+
Sbjct: 607 KLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQ 658
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 155/546 (28%), Positives = 274/546 (50%), Gaps = 59/546 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C S ++++G+++H ++ D ++F + + L+ Y CG + + VFD++
Sbjct: 13 VLKACADSLSVQKGREIHGVVFKLGFDSDVF-VGNTLLLFYGNCGGLKDVKRVFDEMLER 71
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMR-EFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V N ++ + G + EAI F M +R N + VL C GL D G+Q+
Sbjct: 72 DVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQI 131
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + G ++ V+VGNAL+D+Y KCG + +RRVF + ER+ VSW ++I+ + +
Sbjct: 132 HCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERN 191
Query: 196 DEAVVLFERMKLEGLEPNQFTY-----------------------------------NAI 220
+A+ +F M G++PN T+ NA+
Sbjct: 192 QDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANAL 251
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I YA+ G S A F+++ + ++V+WNAM++ FAQ++ E A+ L + M G
Sbjct: 252 IDMYAKSGRSLQASNVFNQIGEK----NIVSWNAMVANFAQNRLELAAVDLVRQMQADGE 307
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
PN+VT T VL A G ++ G+EIHA R G +D+F +AL DMY+KCG L AR
Sbjct: 308 IPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARR 367
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F+I+ +++ S+N +I Y + S+ LF M +GM+ + V+ + V+SAC++
Sbjct: 368 VFKIS-LRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAA 426
Query: 401 VEKGLEIFRSMKERYGVKISKEHYA------CVVDMLCRSGRMVEAYDLLRQVPMYVTNS 454
+++G KE +G+ + K + ++D + GR+ A + RQ+P T S
Sbjct: 427 LKQG-------KEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTAS 479
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENLRKIM 513
G + G +A+ + E E G+ ++ + + C+ G E + + M
Sbjct: 480 WNSMIL-GYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHM 538
Query: 514 KEKNVQ 519
+ +N++
Sbjct: 539 QVQNIK 544
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 165/337 (48%), Gaps = 46/337 (13%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
R + TF VLKAC L ++KG+++H V ++GF++DV VGN L+ Y CG L +R
Sbjct: 4 RLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKR 63
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL-EGLEPNQFTY----------- 217
VF M ERDVVSW S+I + EA+ LF M L G PN +
Sbjct: 64 VFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLE 123
Query: 218 ------------------------NAIIASYARRG---DSNAAFAFFSRMTAEGFVPDLV 250
NA++ Y + G DS F S V
Sbjct: 124 DGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNG-------V 176
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
+WNA+I+ A +R +AL++F+ M+ G+KPN+VT + +L G+EIH
Sbjct: 177 SWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFS 236
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
R GL D+F +ALIDMY+K G A +F KN+ SWNAM+ + ++ + +++
Sbjct: 237 LRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAV 296
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
+L +M +G N VT +VL AC+ G + G EI
Sbjct: 297 DLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEI 333
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G++ ++ T VL+A + S+Q GREIH +V ++G DVF G+ L+ Y CG LKD
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM-LEEGMRANEVTLISVLSACS 396
+ +F+ ++V SWN++IG + HG +I LF M L G R N V+++SVL C+
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 167/553 (30%), Positives = 293/553 (52%), Gaps = 44/553 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C + +Q+HA + ++ ++ L+ +Y + A VF +I +
Sbjct: 205 IVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKD 264
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+++W M + F+ G EA+ +F ++ + +Y+ N+F F AC LL+ G+Q
Sbjct: 265 --LISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQ 322
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + + G +D+ G +L DMY+KCG L SAR VF+ + + D+V+W ++I+G+ +VS
Sbjct: 323 IHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSN 382
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
E+ F +M+ GL PN T N+
Sbjct: 383 AKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNS 442
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+++ Y++ + N A F + G D+V+WN +++ Q + E L+L K M S
Sbjct: 443 LLSMYSKCSNLNDALQVFEDI---GNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASR 499
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
IKP++VT+T VL + G S ++G +IH + + GL++D+ +ALI+MY+KCGSL+ AR
Sbjct: 500 IKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECAR 559
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ ++ SW+++I Y + G + ELF M G++ NE+T + +L+ACSH G
Sbjct: 560 KMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIG 619
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
+VE+GL+++R+M+E Y + +KEH +C+VD+L R+G + A D +RQ+P +
Sbjct: 620 MVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTL 679
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C +HG ++ E ++ VML NI A+ G W + LR M+ +V
Sbjct: 680 LAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVG 739
Query: 520 KQPGFSRVEKRNE 532
K PG S +E +++
Sbjct: 740 KVPGQSWIEIKDK 752
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 151/553 (27%), Positives = 258/553 (46%), Gaps = 66/553 (11%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVH-ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
SV Y L+ C ++L G+++H +L N L++ ++ +Y CG + AR +F
Sbjct: 98 SVTYTH-LINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMF 156
Query: 71 DKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
D +P NV ++W M S ++ G AI + M + + FTF ++K+C GL D
Sbjct: 157 DSMPLKNV--VSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDD 214
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
K +Q+HA + F D+ NALI MY+K + A VF + +D++SW SMI+G
Sbjct: 215 FKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAG 274
Query: 189 YCNVSKVDEAVVLFERMKLEGL-EPNQFTYNAIIASYARRGDSNAA---------FAFFS 238
+ + EA+ F M + + +PN+F + + ++ ++ + + F S
Sbjct: 275 FSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGS 334
Query: 239 RMTAE----------GFV------------PDLVTWNAMISGFAQSKRENEALKLFKGML 276
+ A GF+ PDLV WNA+I+GFA E+ F M
Sbjct: 335 DLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMR 394
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+G+ PN+VTV +L A + G ++H+ + +MG ++D+ ++L+ MYSKC +L
Sbjct: 395 HTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLN 454
Query: 337 DARTLFE-ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
DA +FE I ++ SWN ++ + + L + M ++ + VTL +VL +
Sbjct: 455 DALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSS 514
Query: 396 SHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV--PMYVT 452
E G +I MK + IS + +++M + G + A + + P ++
Sbjct: 515 GQIASYEVGSQIHCFIMKSGLNLDISVSN--ALINMYTKCGSLECARKMFDSIGNPDIIS 572
Query: 453 NS--MAGAFRNGCNIHGRRDLAVTMGEEFFEM-----GL-RKPD--GFVMLSNICAADGE 502
S + G + GC G+E FE+ GL KP+ FV + C+ G
Sbjct: 573 WSSLIVGYAQAGC------------GKEAFELFRTMRGLGVKPNEITFVGILTACSHIGM 620
Query: 503 WHEAENLRKIMKE 515
E L + M+E
Sbjct: 621 VEEGLKLYRTMQE 633
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 15/232 (6%)
Query: 267 EALKLFKGMLVSGIKP-NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EALK F P +VT T ++ A S++ GR+IH + D+ + +
Sbjct: 80 EALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHI 139
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
+ MY KCGSLK+AR +F+ +KNV SW +MI Y ++G D++I L+ +ML G +
Sbjct: 140 LSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDH 199
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA------CVVDMLCRSGRMVE 439
T S++ +CS GL+ F+ ++ + + E A ++ M + +M +
Sbjct: 200 FTFGSIVKSCS-------GLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMAD 252
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
A ++ ++ + S G+ G + G A+ E + +P+ FV
Sbjct: 253 AINVFSRIIIKDLISW-GSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFV 303
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 305/612 (49%), Gaps = 102/612 (16%)
Query: 19 LLGKCMKSK-ALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C+KSK + + VHA + + N ++++L+ Y+ CG + R VFDK+P
Sbjct: 25 LLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR 84
Query: 77 NVFMLN-----------------------------WMVMASAFTGN--FQEAIGYFSLMR 105
N++ N W M S F + +EA+ YF++M
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
+ + N+++F+ VL AC GL D+ KG QVH++ + F +DV +G+AL+DMYSKCG +
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
A+RVF M +R+VVSW S+I+ + EA+ +F+ M +EP++ T ++I++ A
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264
Query: 226 R--------------------RGD---SNA---AFAFFSRMTAEGFVPD----------- 248
R D SNA +A SR+ F+ D
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 249 --------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+V+WNA+I+G+ Q+ EAL LF + + P
Sbjct: 325 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCP 384
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI------DVFTGSALIDMYSKCGSLK 336
+ + +L+A + +G + H V + G D+F G++LIDMY KCG ++
Sbjct: 385 THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVE 444
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
+ +F ++ SWNAMI + ++G + ++ELF MLE G + + +T+I VLSAC
Sbjct: 445 EGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
H G VE+G F SM +GV ++HY C+VD+L R+G + EA ++ ++PM + +
Sbjct: 505 HAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIW 564
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
G+ C +H L + E+ E+ +V+LSN+ A G+W + N+RK M+++
Sbjct: 565 GSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKE 624
Query: 517 NVQKQPGFSRVE 528
V KQPG S ++
Sbjct: 625 GVTKQPGCSWIK 636
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 176/370 (47%), Gaps = 51/370 (13%)
Query: 116 FSIVLKACV-GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
F+ +L +C+ L + VHA + GF N++ + N LID YSKCG L R+VF M
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
+R++ +T+N+++ + G + A
Sbjct: 82 PQRNI-----------------------------------YTWNSVVTGLTKLGFLDEAD 106
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
+ F M D TWN+M+SGFAQ R EAL F M G N + VL A
Sbjct: 107 SLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSAC 162
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
+ G ++H+L+ + DV+ GSAL+DMYSKCG++ DA+ +F+ +NV SWN
Sbjct: 163 SGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN 222
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF----RS 410
++I C+ ++G ++++F+ MLE + +EVTL SV+SAC+ ++ G E+ ++
Sbjct: 223 SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM---YVTNSMAGAFRNGCNIHG 467
K R + +S VDM + R+ EA + +P+ SM + +
Sbjct: 283 DKLRNDIILSN----AFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 338
Query: 468 RRDLAVTMGE 477
R + M E
Sbjct: 339 ARLMFTKMAE 348
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 150/331 (45%), Gaps = 43/331 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C A++ G++VH + ND N L + V +YA C + AR +FD +
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 74 PNPNVF-----------------------------MLNWMVMASAFT--GNFQEAIGYFS 102
P NV +++W + + +T G +EA+ F
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF------ENDVSVGNALID 156
L++ ++F+ +LKAC L ++ G Q H + GF E+D+ VGN+LID
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 157 MYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT 216
MY KCG + VF M ERD VSW +MI G+ +EA+ LF M G +P+ T
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
++++ G +FS MT + G P + M+ ++ EA + + M
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
++P++V +L A + +I +G+ +
Sbjct: 556 ---PMQPDSVIWGSLLAACKVHRNITLGKYV 583
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 294/582 (50%), Gaps = 81/582 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN--IFSLKSKLVGVYA--GCGDVNSARLVFDKIP 74
LL C K+ + KQ+H+ + L+ F+L SKL+ A G+++ A L+F+ I
Sbjct: 38 LLSTC---KSFQNLKQIHSQIIKTGLHNTQFAL-SKLIEFCAISPFGNLSYALLLFESIE 93
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
PN F+ N M+ ++ + + AI ++ M N +TF +LK+C + ++GKQ
Sbjct: 94 QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQ 153
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCG-------------------------------L 163
+H ++G E+D V +LI+MY++ G
Sbjct: 154 IHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGC 213
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT------- 216
L ARR+F + RD VSW +MI+GY + +EA+ F+ MK + PN+ T
Sbjct: 214 LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273
Query: 217 ----------------------------YNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
NA+I Y++ GD + A F + + D
Sbjct: 274 CAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEK----D 329
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
+++WN MI G++ EAL LF+ M S ++PN+VT +L A G++ +G+ IHA
Sbjct: 330 IISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHA 389
Query: 309 LVCR--MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
+ + +GL + ++LIDMY+KCG+++ A+ +F + K++ SWNAMI HG
Sbjct: 390 YIDKKFLGL-TNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHA 448
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
+ ++ELF +M +EG +++T + VLSACSH GLVE G + F SM E Y + +HY C
Sbjct: 449 NMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGC 508
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
++D+L R+G EA L++ + M ++ G+ C +HG +L + FE+
Sbjct: 509 MIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPEN 568
Query: 487 PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
P +V+LSNI A G W + +R + +K ++K PG S +E
Sbjct: 569 PGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIE 610
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 283/551 (51%), Gaps = 42/551 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + G+++H L+ DL+ FS + LV +Y+ G++ A VF I +P
Sbjct: 189 ILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANA-LVDMYSKAGEIEGAVAVFQDIAHP 247
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V N ++ A+ M+ R N FT S LKAC + + G+Q+H
Sbjct: 248 DVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLH 307
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ +M +D+ L+DMYSKC ++ ARR + M ++D+++W ++ISGY
Sbjct: 308 SSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHL 367
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
+AV LF +M E ++ NQ T N+++
Sbjct: 368 DAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLL 427
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+Y + + A F T E DLV + +MI+ ++Q EALKL+ M + IK
Sbjct: 428 DTYGKCNHIDEASKIFEERTWE----DLVAYTSMITAYSQYGDGEEALKLYLQMQDADIK 483
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ + +L A + + G+++H + G D+F ++L++MY+KCGS++DA
Sbjct: 484 PDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRA 543
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F + + SW+AMIG Y +HG ++ LF +ML +G+ N +TL+SVL AC+H GLV
Sbjct: 544 FSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLV 603
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
+G + F M+ +G+K ++EHYAC++D+L RSG++ EA +L+ +P + GA
Sbjct: 604 NEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLG 663
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
IH +L + F++ K V+L+NI A+ G W +RK MK+ V+K+
Sbjct: 664 AARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKE 723
Query: 522 PGFSRVEKRNE 532
PG S +E +++
Sbjct: 724 PGMSWIEIKDK 734
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 200/384 (52%), Gaps = 43/384 (11%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMR 105
SL++ LV +Y+ C AR + D+ +V ++W + S + N +EA+ F+ M
Sbjct: 17 SLRNHLVTLYSKCRRFGYARKLVDESSELDV--VSWSSLLSGYVQNGFVEEALLVFNEMC 74
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
+CN+FTF VLKAC D+ G++VH +A GFE+D V N L+ MY+KCGLL
Sbjct: 75 LLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLD 134
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN------------ 213
+RR+F G+ ER+VVSW ++ S Y EAV LF+ M G+ PN
Sbjct: 135 DSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACA 194
Query: 214 -----------------------QFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV 250
QF+ NA++ Y++ G+ A A F + PD+V
Sbjct: 195 GLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAH----PDVV 250
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
+WNA+I+G + AL L M SG +PN T++ L+A G ++GR++H+ +
Sbjct: 251 SWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSL 310
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
+M H D+F L+DMYSKC + DAR ++ K++ +WNA+I Y + G ++
Sbjct: 311 IKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAV 370
Query: 371 ELFERMLEEGMRANEVTLISVLSA 394
LF +M E + N+ TL +VL +
Sbjct: 371 SLFSKMFSEDIDFNQTTLSTVLKS 394
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 188/369 (50%), Gaps = 40/369 (10%)
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
++HA + GF D S+ N L+ +YSKC AR++ E DVVSW+S++SGY
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN-----AAFAFFSRMTAEGFVPD 248
V+EA+++F M L G++ N+FT+ +++ + + + D N A + ++GFV +
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 249 --------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+V+WNA+ S + QS+ EA+ LFK M+ SGI P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N +++ +L A +GR+IH L+ +MGL +D F+ +AL+DMYSK G ++ A +F
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ +V SWNA+I H D ++ L + M G R N TL S L AC+ G E
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKE 301
Query: 403 KGLEIFRSMKERYGVKISKEHYACV--VDMLCRSGRMVE---AYDLLRQVPMYVTNSMAG 457
G ++ S+ + + + +A V VDM + M + AYD + + + N++
Sbjct: 302 LGRQLHSSLIK---MDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALIS 358
Query: 458 AFRNGCNIH 466
+ C H
Sbjct: 359 GYSQ-CGDH 366
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 145/292 (49%), Gaps = 5/292 (1%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L +A++ KQ+H + + + + F + + L+ Y C ++ A +F++
Sbjct: 388 LSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERT 447
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
++ M+ A + G+ +EA+ + M++ + + F S +L AC L ++GKQ
Sbjct: 448 WEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQ 507
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H A + GF D+ N+L++MY+KCG + A R F + R +VSW++MI GY
Sbjct: 508 LHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGH 567
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWN 253
EA+ LF +M +G+ PN T +++ + G N +F +M G P +
Sbjct: 568 GKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYA 627
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
MI +S + NEA++L + + + +L A + +I++G++
Sbjct: 628 CMIDLLGRSGKLNEAVELVNSI---PFEADGFVWGALLGAARIHKNIELGQK 676
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 174/513 (33%), Positives = 279/513 (54%), Gaps = 43/513 (8%)
Query: 25 KSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
+SK + Q +HA L N + F + +L+ + C ++ A +F NPNV++
Sbjct: 58 RSKHINQVLPIHAQLIRNGHSQDPF-MVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYT 116
Query: 83 WMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
++ +GN+ +AI +S M + + + +LKAC L +++G++VH+ A ++
Sbjct: 117 ALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKL 176
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G ++ V ++++Y KCG L ARRVF M E DVV+ T MIS Y + V+E
Sbjct: 177 GLSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVEE----- 230
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
A A FSR+ + D V W AMI GF ++
Sbjct: 231 ------------------------------AGAVFSRVRRK----DTVCWTAMIDGFVRN 256
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
+ N AL+ F+GM ++PN T+ VL A G+++IGR +H+ + + + +++F G
Sbjct: 257 EEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVG 316
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+ALI+MYS+CGS+ +A+T+F+ + ++V ++N MI +G +IELF M+ +R
Sbjct: 317 NALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLR 376
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
VT + VL+ACSHGGLV+ G +IF SM YGV+ EHY C+VD+L R GR+ EAYD
Sbjct: 377 PTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYD 436
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
L+R + M + M G + C +H +L + + + G +V+LS++ A+ G+
Sbjct: 437 LIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGK 496
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
W EA +R MKE +QK+PG S +E NE E
Sbjct: 497 WKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHE 529
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 18 CLLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C+L C + AL G+ VH+ + +LN+F + + L+ +Y+ CG ++ A+ VFD++ +
Sbjct: 283 CVLSACSQLGALEIGRWVHSYMRKFEIELNLF-VGNALINMYSRCGSIDEAQTVFDEMKD 341
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV--GLLDIKKGK 133
+V N M+ + G ++AI F +M R TF VL AC GL+D K
Sbjct: 342 RDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDF-GFK 400
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
H++ G E + ++D+ + G L A + M
Sbjct: 401 IFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM 441
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 288/554 (51%), Gaps = 40/554 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C L GKQ+HA +L SL + L+ Y CG V +A +FD +P
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMP 311
Query: 75 NPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
N N+ ++W + S + N +EA+ F+ M +F + + F S +L +C L ++ G
Sbjct: 312 NKNI--ISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFG 369
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
QVHA + ND V N+LIDMY+KC L AR+VF DVV + +MI GY +
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRL 429
Query: 193 S---KVDEAVVLFERMKLEGLEPNQFTYNAII---ASYARRGDS---------------- 230
++ +A+ +F M+ + P+ T+ +++ AS G S
Sbjct: 430 GTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDI 489
Query: 231 ---NAAFAFFSR---------MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+A A +S + E V DLV WN+M SG+ Q EAL LF + +S
Sbjct: 490 FAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLS 549
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+P+ T ++ A G S+Q+G+E H + + GL + + +AL+DMY+KCGS +DA
Sbjct: 550 RDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDA 609
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
F+ ++V WN++I Y HG ++++ E+M+ EG+ N +T + VLSACSH
Sbjct: 610 HKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHA 669
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLVE GL+ F M R+G++ EHY C+V +L R+GR+ EA +L+ ++P + +
Sbjct: 670 GLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRS 728
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
+GC G +LA E + F +LSNI A+ G W +A+ +R+ MK + V
Sbjct: 729 LLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGV 788
Query: 519 QKQPGFSRVEKRNE 532
K+PG S +E E
Sbjct: 789 VKEPGRSWIEINKE 802
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 191/404 (47%), Gaps = 46/404 (11%)
Query: 35 VHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN 93
VH + + L + + L + L+ +Y+ G + AR VF+K+P N+ + MV A G
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 94 FQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGK--QVHAVATQMGFENDVSV 150
++E++ F R N++ S ++AC GL + Q+ + + F+ DV V
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYV 185
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
G LID Y K G + AR VF + E+ V+WT+MISG + + ++ LF ++ +
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNV 245
Query: 211 EPNQFTY-----------------------------------NAIIASYARRGDSNAAFA 235
P+ + N +I SY + G AA
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHK 305
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F M + ++++W ++SG+ Q+ EA++LF M G+KP+ + +L +
Sbjct: 306 LFDGMPNK----NIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCA 361
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
+++ G ++HA + L D + ++LIDMY+KC L +AR +F+I +V +NA
Sbjct: 362 SLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNA 421
Query: 356 MIGCYGKHGM---VDSSIELFERMLEEGMRANEVTLISVLSACS 396
MI Y + G + ++ +F M +R + +T +S+L A +
Sbjct: 422 MIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASA 465
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 147/307 (47%), Gaps = 34/307 (11%)
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH G E D + N L+++YS+ G + AR+VF M ER++V+W++M+S +
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 195 VDEAVVLF-ERMKLEGLEPNQFTYNAIIASYARRGDSN-------AAFAFFSRMTAEGFV 246
+E++V+F + + PN++ ++ I + + S +F SR + +V
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYV 185
Query: 247 PDL--------------------------VTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
L VTW MISG + R +L+LF ++ +
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNV 245
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P+ ++ VL A + ++ G++IHA + R G D + LID Y KCG ++ A
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHK 305
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
LF+ KN+ SW ++ Y ++ + ++ELF M + G++ + S+L++C+
Sbjct: 306 LFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHA 365
Query: 401 VEKGLEI 407
+E G ++
Sbjct: 366 LEFGTQV 372
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 120/255 (47%), Gaps = 14/255 (5%)
Query: 200 VLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
V+ ++ + GLE + + N ++ Y+R G A F +M +LVTW+ M+S
Sbjct: 65 VVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPER----NLVTWSTMVSAC 120
Query: 260 AQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQA-GGLTGSIQIGR----EIHALVCRM 313
E+L +F PN ++ +QA GL GS GR ++ + + +
Sbjct: 121 NHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGS---GRWMVFQLQSFLVKS 177
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
DV+ G+ LID Y K G++ AR +F+ K+ +W MI K G S++LF
Sbjct: 178 RFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
+++E + + L +VLSACS +E G +I + RYG + ++D +
Sbjct: 238 YQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL-RYGHEKDASLMNVLIDSYVK 296
Query: 434 SGRMVEAYDLLRQVP 448
GR+ A+ L +P
Sbjct: 297 CGRVRAAHKLFDGMP 311
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 282 PNNVTVTG------VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
P+ + + G +LQ L + +H + GL +D + + L+++YS+ G +
Sbjct: 36 PSTIGIRGRREFARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGM 95
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA-NEVTLISVLSA 394
AR +FE +N+ +W+ M+ HG + S+ +F + NE L S + A
Sbjct: 96 VYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQA 155
Query: 395 CSHGGLVEKG-LEIFRSMKERYGVKISKEHY--ACVVDMLCRSGRMVEAYDLLRQVPMYV 451
CS GL G +F+ + ++ Y ++D + G + A + +P
Sbjct: 156 CS--GLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKS 213
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
T + +GC GR +++ + + E G PDG++ LS + +A
Sbjct: 214 TVTWTTMI-SGCVKMGRSYVSLQLFYQLME-GNVVPDGYI-LSTVLSA 258
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 178/552 (32%), Positives = 284/552 (51%), Gaps = 40/552 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L C L L G Q+H L L + ++ + LV +YA C ++ +F +P
Sbjct: 250 LACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP 309
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
++ N M+ G +A+ F M++ R + T +L A L +GK+
Sbjct: 310 RDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKE 369
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + DV + +AL+D+Y KC + A+ V+ DVV ++MISGY
Sbjct: 370 LHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGM 429
Query: 195 VDEAVVLFERMKLEGLEPNQ-----------------------------------FTYNA 219
EAV +F + +G+ PN + +A
Sbjct: 430 SQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESA 489
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YA+ G + + FS+++A+ D VTWN+MIS FAQ+ EAL LF+ M + G
Sbjct: 490 LMDMYAKCGRLDLSHYIFSKISAK----DEVTWNSMISSFAQNGEPEEALNLFREMCMEG 545
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+K +NVT++ VL A +I G+EIH +V + + D+F SALIDMY KCG+L+ A
Sbjct: 546 VKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAH 605
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+FE KN SWN++I YG +G+V S+ L M EEG +A+ VT ++++SAC+H G
Sbjct: 606 RVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAG 665
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
V++GL +FR M E Y + EH+AC+VD+ R+G++ +A +L+ +P + GA
Sbjct: 666 QVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGAL 725
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ C +H +LA +E F++ +V++SNI A G W +R++MK+ VQ
Sbjct: 726 LHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQ 785
Query: 520 KQPGFSRVEKRN 531
K PG+S V+ N
Sbjct: 786 KIPGYSWVDVNN 797
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 241/487 (49%), Gaps = 45/487 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIF--SLKSKLVGVYAGCGDVNSARLVFDKIPN- 75
+L C+ L G QVH T L+ +L+++LVG+Y A VF +P
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 76 --PNVFMLNWMVMASAFTGNFQEAIGYFSLM--REFIYRCNKFTFSIVLKACVGLLDIKK 131
NW++ G+++ A+ ++ M + TF V+K+C L I
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G+ VH A +G + D+ VG+ALI MY+ GLL AR+VF GM ERD V W M+ GY
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD---------------------- 229
V AV LF M+ G EPN T ++ A D
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAV 284
Query: 230 SNAAFAFFSRMTAE-------GFVP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
+N + +++ G +P DLVTWN MISG Q+ ++AL LF M SGI
Sbjct: 285 ANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGI 344
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+P++VT+ +L A G+E+H + R +H+DVF SAL+D+Y KC +++ A++
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS 404
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+++ ++ +V + MI Y +GM ++++F +LE+G+R N V + SVL AC+
Sbjct: 405 VYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAA 464
Query: 401 VEKGLEIFR-SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM---YVTNSMA 456
++ G E+ ++K Y + E + ++DM + GR+ ++ + ++ NSM
Sbjct: 465 MKLGQELHSYALKNAYEGRCYVE--SALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMI 522
Query: 457 GAF-RNG 462
+F +NG
Sbjct: 523 SSFAQNG 529
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 186/606 (30%), Positives = 296/606 (48%), Gaps = 77/606 (12%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVY---AGCGDV 63
P N + N ++ C +RQ KQ+ A + + + V + A GD+
Sbjct: 151 PTNVIITNPTLLIMESC---STMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDL 207
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
+ A +F+++ PN FM N M+ A +F M + + +F LKAC
Sbjct: 208 HYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKAC 267
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+ +G+ V+ V +MGF+ ++ V N LI Y++ GLL +AR+VF ++DVV+WT
Sbjct: 268 QQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWT 327
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD-------------- 229
+MI GY +EA+ +FE M L +EPN+ T A++++ + G+
Sbjct: 328 TMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEK 387
Query: 230 --------SNA-------------AFAFFSRMTAEGFVPDLVTWNAMISGFA-------- 260
NA A F RM + D+ +W +M++G+A
Sbjct: 388 NMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK----DVYSWTSMVNGYAKCGDLESA 443
Query: 261 -----QSKREN------------------EALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
Q+ R+N E+LKLF M+ G+ P T+ VL A G
Sbjct: 444 RRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQL 503
Query: 298 GSIQIGREIHA-LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+ +G IH V + + V +A++DMY+KCGS+ A +F +N+ SWN M
Sbjct: 504 TCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTM 563
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I Y +G +I +F++M G N +T +S+L+ACSHGGL+ +G E F +M+ +YG
Sbjct: 564 IAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYG 623
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
+K + HYAC+VD+L R+G + EAY L+ +PM + GA N C +HG +LA
Sbjct: 624 IKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSA 683
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEK 536
+ +V+L+N CA D +W + +R +MK+K V+K PG+S +E FVE
Sbjct: 684 HNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEF 743
Query: 537 EVQNES 542
V +ES
Sbjct: 744 LVADES 749
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 179/567 (31%), Positives = 277/567 (48%), Gaps = 75/567 (13%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ--EAIGYFS 102
N FS + L+ YA G + AR +F+ IP+P+ N +V A A G +A+ + +
Sbjct: 82 NTFSYNA-LLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLA 140
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M + N ++F+ L AC D++ G+QVH + + +DV +G AL+DMY+KC
Sbjct: 141 AMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCE 200
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----- 217
ARRVF M ER+VVSW S+I+ Y V EA+VLF M G P++ T
Sbjct: 201 RPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMS 260
Query: 218 -------------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFV 246
NA++ YA+ G + A F M + V
Sbjct: 261 ACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVV 320
Query: 247 PD---------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+ ++ WN +I+ +AQ+ E EA++LF +
Sbjct: 321 SETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDS 380
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI------DVFTGSALIDMYSKCG 333
I P + T VL A G +Q+G++ H V + G DVF G++L+DMY K G
Sbjct: 381 IWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTG 440
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
S+ D +FE ++ SWNAMI Y ++G ++ LFERML + VT+I VLS
Sbjct: 441 SIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLS 500
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
AC H GLV++G F M E +G+ S++HY C+VD+L R+G + EA +L++ +P +
Sbjct: 501 ACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDS 560
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIM 513
+ + C +H +L FE+ +V+LSN+ A G+W + +R+ M
Sbjct: 561 VLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSM 620
Query: 514 KEKNVQKQPGFSRVE---KRNEFVEKE 537
K++ V KQPG S +E K N F+ ++
Sbjct: 621 KDRGVSKQPGCSWIEIGSKMNVFLARD 647
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 150/303 (49%), Gaps = 14/303 (4%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWT----SMISGYCNVSKVDEAVVLFERMKL 207
+ L D+ L AR + + V T +++S Y + ++ EA +F+ + L
Sbjct: 21 SPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPL 80
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN- 266
N F+YNA++++YAR G + A A F + PD ++NA+++ A+ R +
Sbjct: 81 R----NTFSYNALLSAYARLGRPDEARALFEAIPD----PDQCSYNAVVAALARHGRGHA 132
Query: 267 -EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
+AL+ M N + L A ++ G ++H LV R DV G+AL
Sbjct: 133 GDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTAL 192
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
+DMY+KC DAR +F+ +NV SWN++I CY ++G V ++ LF M+ G +E
Sbjct: 193 VDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDE 252
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
VTL SV+SAC+ +G ++ M +R ++ +VDM + GR EA +
Sbjct: 253 VTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFD 312
Query: 446 QVP 448
+P
Sbjct: 313 SMP 315
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 148/329 (44%), Gaps = 45/329 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C A R+G+QVHA + D + L + LV +YA CG AR +FD +
Sbjct: 255 LSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSM 314
Query: 74 PN-------------------------------PNVFMLNWMVMASAFTGNFQEAIGYF- 101
P+ NV N ++ A A G +EAI F
Sbjct: 315 PSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFV 374
Query: 102 SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF------ENDVSVGNALI 155
L R+ I+ + +T+ VL AC + ++ G+Q H + GF E+DV VGN+L+
Sbjct: 375 QLKRDSIWPTH-YTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLV 433
Query: 156 DMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF 215
DMY K G + +VF M RD VSW +MI GY + +A+ LFERM P+
Sbjct: 434 DMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSV 493
Query: 216 TYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
T ++++ G + F MT + G P + M+ ++ EA +L K
Sbjct: 494 TMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKD 553
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
M +P++V +L A L ++++G
Sbjct: 554 M---PTEPDSVLWASLLGACRLHKNVELG 579
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 172/546 (31%), Positives = 279/546 (51%), Gaps = 38/546 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C S L G Q H+++ L N+F + + LV +YA CG + AR +F+ + +
Sbjct: 434 LLSTCAVSHDLEMGSQFHSIIIKKKLTKNLF-VGNALVDMYAKCGALEDARQIFEHMCDR 492
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ N ++ N EA F M + + LKAC + + +GKQVH
Sbjct: 493 DNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVH 552
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ + G + + G++LIDMYSKCG++ AR+VF M E VVS ++I+GY + ++
Sbjct: 553 CLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQ-NNLE 611
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD-------- 248
EAVVLF+ M +G+ P++ T+ I+ + + F ++ GF +
Sbjct: 612 EAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISL 671
Query: 249 -------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+V W M+SG +Q+ EALK +K M G P+
Sbjct: 672 LGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPD 731
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF- 342
T VL+ + S++ GR IH+L+ + +D T + LIDMY+KCG +K + +F
Sbjct: 732 QATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFD 791
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E+ R NV SWN++I Y K+G + ++++F+ M + + +E+T + VL+ACSH G V
Sbjct: 792 EMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVS 851
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
G +IF M +YG++ +H AC+VD+L R G + EA D + + + +
Sbjct: 852 DGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGA 911
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IHG E E+ + +V+LSNI A+ G W EA LRK M+++ V+K P
Sbjct: 912 CRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVP 971
Query: 523 GFSRVE 528
G+S ++
Sbjct: 972 GYSWID 977
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/425 (32%), Positives = 217/425 (51%), Gaps = 15/425 (3%)
Query: 28 ALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
ALR GK VH+ L I S L + +V +YA C V+ A F+ + +V N M
Sbjct: 75 ALRIGKAVHSKSLI--LGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSM 131
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ + G + + F + E + NKFTFSIVL +++ G+Q+H +MG
Sbjct: 132 LSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGL 191
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
E + G AL+DMY+KC L A+RVF G+ + + V WT + SGY +EAV++FER
Sbjct: 192 ERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFER 251
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M+ EG P+ + +I +Y G A F M + PD+V WN MISG +
Sbjct: 252 MRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPS----PDVVAWNVMISGHGKRGC 307
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
E A++ F M S +K T+ VL A G+ ++ +G +HA ++GL +++ GS+
Sbjct: 308 EIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+ MYSKC ++ A +FE +N WNAMI Y +G +ELF M G +
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNID 427
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRMVEAYD 442
+ T S+LS C+ +E G + + ++ K++K + +VDM + G + +A
Sbjct: 428 DFTFTSLLSTCAVSHDLEMGSQFHSIIIKK---KLTKNLFVGNALVDMYAKCGALEDARQ 484
Query: 443 LLRQV 447
+ +
Sbjct: 485 IFEHM 489
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 221/457 (48%), Gaps = 59/457 (12%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
++ Y G + ARL+F ++P+P+V N M+ G AI YF MR+ +
Sbjct: 267 VINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKST 326
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
+ T VL A + ++ G VHA A ++G +++ VG++L+ MYSKC + +A +VF
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
+ ER+ V W +MI GY + + + + LF MK G + FT+ +++++ A D
Sbjct: 387 ALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEM 446
Query: 233 AFAFFS-----RMTAEGFV--------------------------PDLVTWNAMISGFAQ 261
F S ++T FV D V+WN +I G+ Q
Sbjct: 447 GSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQ 506
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
+ E+EA LF M GI + + L+A + G+++H L + GL + T
Sbjct: 507 DENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHT 566
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
GS+LIDMYSKCG ++DAR +F +V S NA+I Y ++ + + ++ LF+ ML +G+
Sbjct: 567 GSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKGV 625
Query: 382 RANEVTLISVLSACS-----------HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
+E+T +++ AC HG +++ G F S E G+ + + +
Sbjct: 626 NPSEITFATIVEACHKPESLTLGTQFHGQIIKWG---FSSEGEYLGISL--------LGL 674
Query: 431 LCRSGRMVEAYDLLRQV--PMYV---TNSMAGAFRNG 462
S RM EA L ++ P + T M+G +NG
Sbjct: 675 YMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 220/460 (47%), Gaps = 49/460 (10%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
NI+ + S LV +Y+ C + +A VF+ + N + N M+ A G + + F M
Sbjct: 361 NIY-VGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDM 419
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
+ Y + FTF+ +L C D++ G Q H++ + ++ VGNAL+DMY+KCG L
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGAL 479
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK--------------LE-- 208
AR++F M +RD VSW ++I GY EA LF RM L+
Sbjct: 480 EDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKAC 539
Query: 209 -------------------GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL 249
GL+ T +++I Y++ G A FS M +
Sbjct: 540 TNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWS----V 595
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
V+ NA+I+G++Q+ E EA+ LF+ ML G+ P+ +T +++A S+ +G + H
Sbjct: 596 VSMNALIAGYSQNNLE-EAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQ 654
Query: 310 VCRMGLHID-VFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVD 367
+ + G + + G +L+ +Y + +A LF E++ K++ W M+ + ++G +
Sbjct: 655 IIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYE 714
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+++ ++ M +G ++ T ++VL CS + +G I S+ + + +
Sbjct: 715 EALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAI-HSLIFHLAHDLDELTSNTL 773
Query: 428 VDMLCRSGRM---VEAYDLLRQVPMYVT-NSMAGAF-RNG 462
+DM + G M + +D +R+ V+ NS+ + +NG
Sbjct: 774 IDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNG 813
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 139/273 (50%), Gaps = 15/273 (5%)
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
L ++ GK VH+ + +G +++ +GNA++D+Y+KC + A + F+ + E+DV +W SM+
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSML 132
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
S Y ++ + + + F + + PN+FT++ ++++ AR + M G
Sbjct: 133 SMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLE 192
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
+ A++ +A+ R +A ++F G+ + PN V T + +G ++ G
Sbjct: 193 RNSYCGGALVDMYAKCDRLGDAQRVFDGI----VDPNTVCWTCL-----FSGYVKAGLPE 243
Query: 307 HALVC--RM---GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
A++ RM G D +I+ Y G LKDAR LF +V +WN MI +G
Sbjct: 244 EAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHG 303
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
K G +IE F M + +++ TL SVLSA
Sbjct: 304 KRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSA 336
>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 287/542 (52%), Gaps = 41/542 (7%)
Query: 23 CMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C + LR K H + + N + S L+ +YA CG + SA +VF+ + +
Sbjct: 210 CGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTW 269
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
M+ + G +EA+ F M++ N T I+L++C L +++GK VH V +
Sbjct: 270 TAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIK 329
Query: 142 MGFENDVS-VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ ++ +G L+++Y+ ++ H + R + W ++IS Y + E V
Sbjct: 330 NDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVD 389
Query: 201 LFERMKLEGLEPN----------------------------------QFTYNAIIASYAR 226
LF RM+ +G P+ ++ +N++I Y++
Sbjct: 390 LFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYVFNSLINMYSK 449
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G + A+ F +M +G +VTWN+MISG +Q+ +A+ LF M V+ + V
Sbjct: 450 CGYVDLAYMIFDQMEPKG----VVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVA 505
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
V+QA G ++ G+ IH + G+ +F +AL+DMY+KCG L+ A+ +F+
Sbjct: 506 FVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMS 565
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
++V SW+++I YG HG + I LF +MLE G++ N+VT+++VLSACSH G V++G+
Sbjct: 566 ERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGML 625
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F SM++ +G++ +EH+ C+VD+L R+G + EAY++++ +P S+ GA NGC IH
Sbjct: 626 FFNSMRD-FGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIH 684
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
R D+A + E + + + +LSNI AA GEW+E +R +MK ++K P +S
Sbjct: 685 QRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSV 744
Query: 527 VE 528
VE
Sbjct: 745 VE 746
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 134/479 (27%), Positives = 229/479 (47%), Gaps = 49/479 (10%)
Query: 26 SKALRQGKQVHALLCTNDLNIFSLKS-KLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
S LR Q+HA + L+ L S KL+ Y+ GD+ S+ VF +P+ FM +
Sbjct: 11 STTLRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVL 70
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ + + G +QEAI + M + N +TF VL+AC G D+ G++VH + GF
Sbjct: 71 LKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGF 130
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+ D V AL+ +Y + G L SAR+VF M RD+VSW+S+IS +++E + F
Sbjct: 131 DMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRC 190
Query: 205 MKLE-----------------------------------GLEPNQFTYNAIIASYARRGD 229
M E G+E ++F +++I YA+ G
Sbjct: 191 MVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGS 250
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+A F +T TW AMIS + EAL LF M + ++PN+VT+
Sbjct: 251 LRSAEIVFENVTYR----STSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRI 306
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDV-FTGSALIDMYSKCGSLKDARTLFEITRIK 348
+L++ ++ G+ +H +V + L ++ G L+++Y+ + +
Sbjct: 307 ILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGR 366
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+A WN +I Y + G++ +++LF RM ++G + +L S LSA + G ++ GL+I
Sbjct: 367 GIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIH 426
Query: 409 RSMKERYGVKISKEH-YACVVDMLCRSGRMVEAYDLLRQV-PMYVT--NSM-AGAFRNG 462
+ +R E+ + +++M + G + AY + Q+ P V NSM +G +NG
Sbjct: 427 GHVIKR---PFMDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNG 482
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 168/380 (44%), Gaps = 44/380 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C LR+GK VH ++ NDL N+ L L+ +YA + + +I
Sbjct: 307 ILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGR 366
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ + N ++ A G +E + F M++ + + F+ + L A +++ G Q+H
Sbjct: 367 GIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIH 426
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ F ++ V N+LI+MYSKCG + A +F M + VV+W SMISG
Sbjct: 427 GHVIKRPFMDEY-VFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYST 485
Query: 197 EAVVLFERMKLE-----------------------------------GLEPNQFTYNAII 221
+A+ LF+ M + G+ F A++
Sbjct: 486 KAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALV 545
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ GD A F M+ +V+W+++IS + + +E + LF ML SGIK
Sbjct: 546 DMYAKCGDLQTAQRVFDNMSER----SVVSWSSLISSYGVHGQISEVIFLFSKMLESGIK 601
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN+VTV VL A G ++ G + G+ ++D+ S+ G L +A +
Sbjct: 602 PNDVTVMNVLSACSHAGCVKEGMLFFNSMRDFGIEPKREHFVCIVDLLSRAGDLDEAYEI 661
Query: 342 FEITRIKNVAS-WNAMI-GC 359
++ AS W A++ GC
Sbjct: 662 IKLMPFPPGASIWGALLNGC 681
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/550 (30%), Positives = 295/550 (53%), Gaps = 35/550 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+ L+ + K+ Q KQ+HA + S ++ +Y ++ A LVF + +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLVFKTLES 67
Query: 76 PNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P V L W + FT F A+ F MR + F VLK+C ++D++ G+
Sbjct: 68 PPV--LAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH ++G + D+ GNAL++MYSK + S R+VF M +DVVS+ ++I+GY
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSG 185
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYA----------------RRG-DSN----- 231
++A+ + M L+P+ FT ++++ ++ R+G DS+
Sbjct: 186 MYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGS 245
Query: 232 ---------AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
A R+ + + D ++WN++++G+ Q+ R NEAL+LF+ M+ + ++P
Sbjct: 246 SLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRP 305
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
V + V+ A ++ +G+++H V R G ++F SAL+DMYSKCG+++ AR +F
Sbjct: 306 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIF 365
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ + + SW A+I + HG ++ LFE M +G++ N+V ++VL+ACSH GLV+
Sbjct: 366 DRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 425
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+ F SM + YG+ EHYA V D+L R+G++ EAYD + ++ + T S+ +
Sbjct: 426 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSS 485
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C++H +LA + E+ F + +V++ N+ A++G W E LR +++K ++K+P
Sbjct: 486 CSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKP 545
Query: 523 GFSRVEKRNE 532
S +E +N+
Sbjct: 546 ACSWIEMKNK 555
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 190/405 (46%), Gaps = 48/405 (11%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
N +L C LR G+ VH + D ++++ + L+ +Y+ ++S R VF+
Sbjct: 106 NVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT-GNALMNMYSKLLGIDSVRKVFE 164
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+P +V N ++ A +G +++A+ M + + FT S VL +D+ K
Sbjct: 165 LMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLK 224
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GK++H + G ++DV +G++L+DMY+K + + RVF ++ RD +SW S+++GY
Sbjct: 225 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQ 284
Query: 192 VSKVDEAVVLFERMKLEGLEP-----------------------------------NQFT 216
+ +EA+ LF +M + P N F
Sbjct: 285 NGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFI 344
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
+A++ Y++ G+ AA F RM + D V+W A+I G A +EA+ LF+ M
Sbjct: 345 ASALVDMYSKCGNIQAARKIFDRMN----LHDEVSWTAIIMGHALHGHGHEAVSLFEEMK 400
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSI-QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
G+KPN V VL A G + + +++ GL+ ++ +A+ D+ + G L
Sbjct: 401 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 460
Query: 336 KDARTLFEITRIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLEE 379
++A R++ S W+ ++ H ++EL E++ E+
Sbjct: 461 EEAYDFISKMRVEPTGSVWSTLLSSCSVH----KNLELAEKVAEK 501
>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 287/542 (52%), Gaps = 41/542 (7%)
Query: 23 CMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C + LR K H + + N + S L+ +YA CG + SA +VF+ + +
Sbjct: 210 CGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTW 269
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
M+ + G +EA+ F M++ N T I+L++C L +++GK VH V +
Sbjct: 270 TAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIK 329
Query: 142 MGFENDVS-VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ ++ +G L+++Y+ ++ H + R + W ++IS Y + E V
Sbjct: 330 NDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVD 389
Query: 201 LFERMKLEGLEPN----------------------------------QFTYNAIIASYAR 226
LF RM+ +G P+ ++ +N++I Y++
Sbjct: 390 LFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYVFNSLINMYSK 449
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G + A+ F +M +G +VTWN+MISG +Q+ +A+ LF M V+ + V
Sbjct: 450 CGYVDLAYMIFDQMEPKG----VVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVA 505
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
V+QA G ++ G+ IH + G+ +F +AL+DMY+KCG L+ A+ +F+
Sbjct: 506 FVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMS 565
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
++V SW+++I YG HG + I LF +MLE G++ N+VT+++VLSACSH G V++G+
Sbjct: 566 ERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGML 625
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F SM++ +G++ +EH+ C+VD+L R+G + EAY++++ +P S+ GA NGC IH
Sbjct: 626 FFNSMRD-FGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIH 684
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
R D+A + E + + + +LSNI AA GEW+E +R +MK ++K P +S
Sbjct: 685 QRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSV 744
Query: 527 VE 528
VE
Sbjct: 745 VE 746
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 230/479 (48%), Gaps = 49/479 (10%)
Query: 26 SKALRQGKQVHALLCTNDLNIFSLKS-KLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
S LRQ Q+HA + L+ L S KL+ Y+ GD+ S+ VF +P+ FM +
Sbjct: 11 STTLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVL 70
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ + + G +QEAI + M + N +TF VL+AC G D+ G++VH + GF
Sbjct: 71 LKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGF 130
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+ D V AL+ +Y + G L SAR+VF M RD+VSW+S+IS +++E + F
Sbjct: 131 DMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRC 190
Query: 205 MKLE-----------------------------------GLEPNQFTYNAIIASYARRGD 229
M E G+E ++F +++I YA+ G
Sbjct: 191 MVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGS 250
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+A F +T TW AMIS + EAL LF M + ++PN+VT+
Sbjct: 251 LRSAEIVFENVTYR----STSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRI 306
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDV-FTGSALIDMYSKCGSLKDARTLFEITRIK 348
+L++ ++ G+ +H +V + L ++ G L+++Y+ + +
Sbjct: 307 ILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGR 366
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+A WN +I Y + G++ +++LF RM ++G + +L S LSA + G ++ GL+I
Sbjct: 367 GIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIH 426
Query: 409 RSMKERYGVKISKEH-YACVVDMLCRSGRMVEAYDLLRQV-PMYVT--NSM-AGAFRNG 462
+ +R E+ + +++M + G + AY + Q+ P V NSM +G +NG
Sbjct: 427 GHVIKR---PFMDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNG 482
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 168/380 (44%), Gaps = 44/380 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C LR+GK VH ++ NDL N+ L L+ +YA + + +I
Sbjct: 307 ILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGR 366
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ + N ++ A G +E + F M++ + + F+ + L A +++ G Q+H
Sbjct: 367 GIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIH 426
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ F ++ V N+LI+MYSKCG + A +F M + VV+W SMISG
Sbjct: 427 GHVIKRPFMDEY-VFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYST 485
Query: 197 EAVVLFERMKLE-----------------------------------GLEPNQFTYNAII 221
+A+ LF+ M + G+ F A++
Sbjct: 486 KAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALV 545
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ GD A F M+ +V+W+++IS + + +E + LF ML SGIK
Sbjct: 546 DMYAKCGDLQTAQRVFDNMSER----SVVSWSSLISSYGVHGQISEVIFLFSKMLESGIK 601
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN+VTV VL A G ++ G + G+ ++D+ S+ G L +A +
Sbjct: 602 PNDVTVMNVLSACSHAGCVKEGMLFFNSMRDFGIEPKREHFVCIVDLLSRAGDLDEAYEI 661
Query: 342 FEITRIKNVAS-WNAMI-GC 359
++ AS W A++ GC
Sbjct: 662 IKLMPFPPGASIWGALLNGC 681
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 276/557 (49%), Gaps = 48/557 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI-PNPN 77
L +C +K L +QVH + N +I + + L+ + + L+F I P+PN
Sbjct: 30 LAKQCSSTKTL---QQVHTQMVVNS-SIHTPNNHLLSKAIHLKNFPYSSLLFSHIAPHPN 85
Query: 78 VFMLNWMVMASAFT-GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ N M+ A T N+ A+ F M + FTF +C L + H
Sbjct: 86 DYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAH 145
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ ++ +D ++LI Y++CGL+ SAR+VF + RD VSW SMI+GY
Sbjct: 146 SLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAR 205
Query: 197 EAVVLFERM-KLEGLEP-----------------------------------NQFTYNAI 220
EAV +F M + +G EP N + +A+
Sbjct: 206 EAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSAL 265
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I+ YA+ G+ +A F M A D++TWNA+ISG+AQ+ +EA+ LF GM +
Sbjct: 266 ISMYAKCGELESARRIFDGMAAR----DVITWNAVISGYAQNGMADEAILLFHGMKEDCV 321
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
N +T+T VL A G++ +G++I + G D+F +ALIDMY+K GSL +A+
Sbjct: 322 TANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQR 381
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE--GMRANEVTLISVLSACSHG 398
+F+ KN ASWNAMI HG ++ LF+ M +E G R N++T + +LSAC H
Sbjct: 382 VFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHA 441
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLV++G +F M +G+ EHY+C+VD+L R+G + EA+DL+R++P GA
Sbjct: 442 GLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGA 501
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C D+ + E+ +++ S I A W ++ +R +M++K +
Sbjct: 502 LLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGI 561
Query: 519 QKQPGFSRVEKRNEFVE 535
K PG S +E N E
Sbjct: 562 TKTPGCSWIEVENHLHE 578
>gi|297794367|ref|XP_002865068.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
gi|297310903|gb|EFH41327.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
Length = 659
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 170/537 (31%), Positives = 278/537 (51%), Gaps = 18/537 (3%)
Query: 4 LIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGD 62
L P + + L L C +S + G+ +HA T+ L + + L+ +Y G
Sbjct: 78 LFDPAVSPDTSVLSVALKACGQSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGK 137
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
++ +F ++ N +V G +E + YFS M + F F+ LKA
Sbjct: 138 IDKGCRIFTEMQFRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKA 197
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C L +K GK++H G + + V N+LI+MY++CG + +F M ERDV SW
Sbjct: 198 CARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFESMSERDVFSW 257
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLE-PNQFTY----------NAIIASYARRGDSN 231
T++I Y + + ++AV F +K+E +Q+TY N+++ Y+ G +
Sbjct: 258 TTLIDAYSQMGQEEKAVATF--LKIEIFRRTSQWTYFCLGDSLSVSNSMMKMYSTCGKLD 315
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
+A F M D++TW+ +I G++Q+ E F M +G KP + + +L
Sbjct: 316 SASVLFQGMRRR----DIITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALASLL 371
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
G ++ GR++HAL +GL + SALI+MYSKCGS+++A +FE T ++
Sbjct: 372 SVSGTMAVLEQGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIFEETDTDDIV 431
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
S AMI Y +HG +I+LFE+ L+ G+R + VT ISVL+ACSH G ++ G F M
Sbjct: 432 SLTAMINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACSHSGQLDLGFRYFNLM 491
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
++ Y ++ KEHY C+VD+LCR+GR+ +A ++ ++P + + N C G +
Sbjct: 492 QDEYNIRPVKEHYGCMVDLLCRAGRLSDAEKMINEMPWKKDDVVWTTLLNACKAKGDTER 551
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
E E+ FV L+NI ++ G+ EA ++RK MK K V K PG+S ++
Sbjct: 552 GRRAAERILELDPTSETAFVTLANIYSSTGKLEEAAHVRKAMKSKGVIKVPGWSSIK 608
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 204/455 (44%), Gaps = 29/455 (6%)
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS-LMREFIYRCNKFTFSIVLKAC 123
+AR +FD++P+ ++ ++ N EA+ FS L+ + + S+ LKAC
Sbjct: 38 AARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKAC 97
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+I G+ +HA A + V VG L++MY + G + R+F M R+ V+WT
Sbjct: 98 GQSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTVTWT 157
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE 243
+++SG + E + F M + F + + + AR + +
Sbjct: 158 AIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKACARLRQVKYGKEIHTHVIVR 217
Query: 244 GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
G L N++I+ + + ++ + LF+ M + + + T ++ A Q+G
Sbjct: 218 GSDASLCVVNSLINMYTECGEMHDGVHLFESM----SERDVFSWTTLIDAYS-----QMG 268
Query: 304 REIHALVCRMGLHI--------------DVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
+E A+ + + I + ++++ MYS CG L A LF+ R ++
Sbjct: 269 QEEKAVATFLKIEIFRRTSQWTYFCLGDSLSVSNSMMKMYSTCGKLDSASVLFQGMRRRD 328
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ +W+ +IG Y + G+ + F M + G + + L S+LS ++E+G ++
Sbjct: 329 IITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALASLLSVSGTMAVLEQGRQV-H 387
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
++ G++ + + +++M + G + EA + + S+ A NG HG
Sbjct: 388 ALALYLGLEQNSTIRSALINMYSKCGSIEEASKIFEETDTDDIVSLT-AMINGYAEHGNT 446
Query: 470 DLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGE 502
A+ + E+ ++GLR PD F+ + C+ G+
Sbjct: 447 KEAIDLFEKSLKVGLR-PDTVTFISVLTACSHSGQ 480
>gi|224054634|ref|XP_002298341.1| predicted protein [Populus trichocarpa]
gi|222845599|gb|EEE83146.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/419 (36%), Positives = 245/419 (58%), Gaps = 1/419 (0%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
NKF VLK C + D++ G+ +H+V + E+DV V ++LIDMYSKCG + ARRVF
Sbjct: 9 NKFVIPSVLKCCGHVYDVQTGRILHSVILKYSIESDVYVISSLIDMYSKCGEVEKARRVF 68
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M E+D+V+ +M+SGY E L ++M+ G++PN T+N++I+ +A++GD
Sbjct: 69 DRMVEKDLVALNAMLSGYGQHGFAKEGFALMDKMEKLGIKPNVITWNSLISGFAQKGDDA 128
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
F M + G PD+++W ++ISG Q+ R A FK ML G P + T++ VL
Sbjct: 129 MVSKMFELMISNGVEPDVISWTSVISGLVQNFRNEAAFDAFKQMLGRGFLPTSATISTVL 188
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A +++ GREIH + + D++ SAL+DMY+KCG + +A LF + +N
Sbjct: 189 AACATMANVRRGREIHGYAVVIRVEDDIYVRSALVDMYAKCGFISEASVLFYMMPERNTV 248
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+WN+MI Y HG D +IELF++M + EG + + +T +VL+ACSH G+VE G +F
Sbjct: 249 TWNSMIFGYANHGYCDEAIELFDQMEKSEGNKLDHLTFTAVLTACSHAGMVEHGQSLFLL 308
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M+++Y + EHYAC+VD+L R+G + EAYD+++++P+ + GA C HG
Sbjct: 309 MQQKYKIVPRLEHYACMVDLLGRAGNLNEAYDMIKKMPVKPDLFVWGALLGACRNHGDIG 368
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEK 529
LA E+ +++SN+ A G W +K+MK K ++ PG S +E+
Sbjct: 369 LAEVAARHLAELEPENAGNNMLMSNLYADAGSWENVSRSKKMMKRKRLKNFPGCSWIEE 427
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M G+ N + VL+ G +Q GR +H+++ + + DV+ S+LIDMYSKCG
Sbjct: 1 MQKQGLGANKFVIPSVLKCCGHVYDVQTGRILHSVILKYSIESDVYVISSLIDMYSKCGE 60
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
++ AR +F+ K++ + NAM+ YG+HG L ++M + G++ N +T S++S
Sbjct: 61 VEKARRVFDRMVEKDLVALNAMLSGYGQHGFAKEGFALMDKMEKLGIKPNVITWNSLISG 120
Query: 395 CSHGG---LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ----- 446
+ G +V K E+ S GV+ + V+ L ++ R A+D +Q
Sbjct: 121 FAQKGDDAMVSKMFELMIS----NGVEPDVISWTSVISGLVQNFRNEAAFDAFKQMLGRG 176
Query: 447 -VPMYVTNSMAGA-------FRNGCNIHG 467
+P T S A R G IHG
Sbjct: 177 FLPTSATISTVLAACATMANVRRGREIHG 205
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 170/389 (43%), Gaps = 76/389 (19%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
+ +L C ++ G+ +H+++ + +++ + S L+ +Y+ CG+V AR VFD++
Sbjct: 13 IPSVLKCCGHVYDVQTGRILHSVILKYSIESDVYVISS-LIDMYSKCGEVEKARRVFDRM 71
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
++ LN M+ G +E F+LM +
Sbjct: 72 VEKDLVALNAMLSGYGQHGFAKEG---FALMDKM-------------------------- 102
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF----ERDVVSWTSMISGY 189
++G + +V N+LI +++ G ++F M E DV+SWTS+ISG
Sbjct: 103 ------EKLGIKPNVITWNSLISGFAQKGDDAMVSKMFELMISNGVEPDVISWTSVISGL 156
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAE- 243
+ + A F++M G P T + ++A+ A RRG +A R+ +
Sbjct: 157 VQNFRNEAAFDAFKQMLGRGFLPTSATISTVLAACATMANVRRGREIHGYAVVIRVEDDI 216
Query: 244 -------------GFVPD------------LVTWNAMISGFAQSKRENEALKLFKGMLVS 278
GF+ + VTWN+MI G+A +EA++LF M S
Sbjct: 217 YVRSALVDMYAKCGFISEASVLFYMMPERNTVTWNSMIFGYANHGYCDEAIELFDQMEKS 276
Query: 279 -GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA-LIDMYSKCGSLK 336
G K +++T T VL A G ++ G+ + L+ + + A ++D+ + G+L
Sbjct: 277 EGNKLDHLTFTAVLTACSHAGMVEHGQSLFLLMQQKYKIVPRLEHYACMVDLLGRAGNLN 336
Query: 337 DARTLFEITRIK-NVASWNAMIGCYGKHG 364
+A + + +K ++ W A++G HG
Sbjct: 337 EAYDMIKKMPVKPDLFVWGALLGACRNHG 365
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 9/219 (4%)
Query: 16 LDCLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
+ +L C +R+G+++H A++ + +I+ ++S LV +YA CG ++ A ++F +
Sbjct: 184 ISTVLAACATMANVRRGREIHGYAVVIRVEDDIY-VRSALVDMYAKCGFISEASVLFYMM 242
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKKG 132
P N N M+ A G EAI F M + + + TF+ VL AC ++ G
Sbjct: 243 PERNTVTWNSMIFGYANHGYCDEAIELFDQMEKSEGNKLDHLTFTAVLTACSHAGMVEHG 302
Query: 133 KQVHAVATQ-MGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYC 190
+ + + Q + ++D+ + G L A + M + D+ W +++
Sbjct: 303 QSLFLLMQQKYKIVPRLEHYACMVDLLGRAGNLNEAYDMIKKMPVKPDLFVWGALLGACR 362
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-YARRG 228
N + A V L LEP N ++++ YA G
Sbjct: 363 NHGDIGLAEVAARH--LAELEPENAGNNMLMSNLYADAG 399
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 282/509 (55%), Gaps = 17/509 (3%)
Query: 33 KQVHALLCTNDLNIFSLKSKLVG-VYAGC----GDVNSARLVFDKIPNPNVFMLNWMVMA 87
KQ+HA L N S ++ L ++AG G +N A VF +I P++FM N M+
Sbjct: 30 KQIHATLIIKGFN--SNRAALRELIFAGAMTISGAINYAHQVFAQITEPDIFMWNTMMRG 87
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
S+ + N + + ++ M + +KFTFS +LK C L K G VH + GFE +
Sbjct: 88 SSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGCTRLEWRKTGFCVHGKVLKYGFEVN 147
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V N LI +S CG L AR +F+ + ER VVSW+++ +GY ++ A +F+ M +
Sbjct: 148 SFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARRGELGVARQIFDEMPV 207
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
+ L ++N +I Y + G+ A F E D+VTWN MI+G+ + +
Sbjct: 208 KDL----VSWNVMITGYVKNGEMENARTLFD----EAPEKDVVTWNTMIAGYVLRGEQRQ 259
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL-HIDVFTGSALI 326
AL++F+ M G P+ VT+ +L A G +Q+GR++H + M + V G+AL+
Sbjct: 260 ALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRGDLSVLLGNALV 319
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANE 385
DMY+KCGS++ A +F+ R K+V +WN++IG HG + SI+LF M + ++ NE
Sbjct: 320 DMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIKPNE 379
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
+T + V+ ACSH G VE+G F+ M+ERY ++ + H+ C+VD+L R+G + EA++L+
Sbjct: 380 ITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFELIA 439
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
++ + + C +HG +L E ++ + +V+LSNI A+ GEW
Sbjct: 440 KMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDESGDYVLLSNIYASAGEWDG 499
Query: 506 AENLRKIMKEKNVQKQPGFSRVEKRNEFV 534
AE +RK+M + V+K+ G S +E + V
Sbjct: 500 AEEVRKLMDDGGVRKEAGRSLIEADDRAV 528
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 178/552 (32%), Positives = 284/552 (51%), Gaps = 40/552 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L C L L G Q+H L L + ++ + LV +YA C ++ +F +P
Sbjct: 250 LACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP 309
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
++ N M+ G +A+ F M++ R + T +L A L +GK+
Sbjct: 310 RDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKE 369
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + DV + +AL+D+Y KC + A+ V+ DVV ++MISGY
Sbjct: 370 LHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGM 429
Query: 195 VDEAVVLFERMKLEGLEPNQ-----------------------------------FTYNA 219
EAV +F + +G+ PN + +A
Sbjct: 430 SQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESA 489
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YA+ G + + FS+++A+ D VTWN+MIS FAQ+ EAL LF+ M + G
Sbjct: 490 LMDMYAKCGRLDLSHYIFSKISAK----DEVTWNSMISSFAQNGEPEEALNLFREMCMEG 545
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+K +NVT++ VL A +I G+EIH +V + + D+F SALIDMY KCG+L+ A
Sbjct: 546 VKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAH 605
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+FE KN SWN++I YG +G+V S+ L M EEG +A+ VT ++++SAC+H G
Sbjct: 606 RVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAG 665
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
V++GL +FR M E Y + EH+AC+VD+ R+G++ +A +L+ +P + GA
Sbjct: 666 QVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGAL 725
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ C +H +LA +E F++ +V++SNI A G W +R++MK+ VQ
Sbjct: 726 LHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQ 785
Query: 520 KQPGFSRVEKRN 531
K PG+S V+ N
Sbjct: 786 KIPGYSWVDVNN 797
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 241/487 (49%), Gaps = 45/487 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIF--SLKSKLVGVYAGCGDVNSARLVFDKIPN- 75
+L C+ L G QVH T L+ +L+++LVG+Y A VF +P
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 76 --PNVFMLNWMVMASAFTGNFQEAIGYFSLM--REFIYRCNKFTFSIVLKACVGLLDIKK 131
NW++ G+++ A+ ++ M + TF V+K+C L I
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G+ VH A +G + D+ VG+ALI MY+ GLL AR+VF GM ERD V W M+ GY
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD---------------------- 229
V AV LF M+ G EPN T ++ A D
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAV 284
Query: 230 SNAAFAFFSRMTAE-------GFVP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
+N + +++ G +P DLVTWN MISG Q+ ++AL LF M SGI
Sbjct: 285 ANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGI 344
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+P++VT+ +L A G+E+H + R +H+DVF SAL+D+Y KC +++ A++
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS 404
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+++ ++ +V + MI Y +GM ++++F +LE+G+R N V + SVL AC+
Sbjct: 405 VYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAA 464
Query: 401 VEKGLEIFR-SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM---YVTNSMA 456
++ G E+ ++K Y + E + ++DM + GR+ ++ + ++ NSM
Sbjct: 465 MKLGQELHSYALKNAYEGRCYVE--SALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMI 522
Query: 457 GAF-RNG 462
+F +NG
Sbjct: 523 SSFAQNG 529
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 190/581 (32%), Positives = 296/581 (50%), Gaps = 80/581 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL + +L Q Q+HA + L L++ L+ ++ AR V D+ P+P
Sbjct: 2 LLSLLRTATSLTQIHQIHAQTLIHGL---PLQTHLIPKLIDLHSIDYARFVLDQTPSPTD 58
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
F N ++ A G+ Q ++ + M + + FTF VLKAC L + +G+Q+H
Sbjct: 59 FSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTH 118
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM------------------------ 174
++GF +D+ V N+LIDMY KC L SAR + M
Sbjct: 119 VLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKA 178
Query: 175 ---FE-----RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG--LEPNQFT-------- 216
FE R+VV WT+MI+GY E + LF +M + ++PN T
Sbjct: 179 RDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSAC 238
Query: 217 ---------------------------YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL 249
A+I Y++ GD A+ F ++ + +L
Sbjct: 239 STLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCK----NL 294
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
+WNA+I+G Q EA+ L++ M +KPN +T+ VL A G++++GRE+H
Sbjct: 295 PSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLY 354
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
+ R GL ++V +AL+DMY+KCG + DA +F T K+VA WNAMI HG S
Sbjct: 355 LGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDS 414
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+ +F +M+ G++ N+VT I VLSAC+H GLVE+G F SM +++G+ EHYAC+VD
Sbjct: 415 LAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVD 474
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD- 488
+L R+G + EAY+L++ + + + + GA + C IH +LA + E M + P+
Sbjct: 475 LLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETI--MASQDPNI 532
Query: 489 GF-VMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
GF ++LSNI A+ G W + +R+ +KEK ++K G S VE
Sbjct: 533 GFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVE 573
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 139/291 (47%), Gaps = 5/291 (1%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNP 76
CLL C G+ + + N + + + L + L+ +Y+ CGDV A +FD +
Sbjct: 233 CLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCK 292
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N+ N ++ G +EAI + M+ + N+ T VL AC GL ++ G++VH
Sbjct: 293 NLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVH 352
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ G + +V + AL+DMY+KCG + A +F E+DV W +MI G
Sbjct: 353 LYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGR 412
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT-AEGFVPDLVTWNAM 255
+++ +F +M G++PN T+ ++++ G FS M G P L + M
Sbjct: 413 DSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACM 472
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
+ ++ EA +L + ML I P+++ +L A + ++++ +I
Sbjct: 473 VDLLGRAGHLKEAYELVQNML---IPPDSIIWGALLSACRIHRNLELADKI 520
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 175/556 (31%), Positives = 280/556 (50%), Gaps = 42/556 (7%)
Query: 10 NLSVNYLDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSAR 67
N S L +L C S LR G+ VH+L +L+ F + LV +Y+ CG A
Sbjct: 327 NFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEF-ISCCLVDMYSKCGLAGDAL 385
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
VF +I +P+V + ++ G +EA F MR N+FT + ++ A L
Sbjct: 386 KVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLG 445
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D+ G+ +HA + GFE D +V NAL+ MY K G + RVF RD++SW +++S
Sbjct: 446 DLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLS 505
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------ 223
G+ + D + +F +M EG PN +T+ +I+ S
Sbjct: 506 GFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDG 565
Query: 224 -----------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLF 272
YA+ A F+R+ DL W +++G+AQ + +A+K F
Sbjct: 566 NDFVGTALVDMYAKNRFLEDAETIFNRLIKR----DLFAWTVIVAGYAQDGQGEKAVKCF 621
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
M G+KPN T+ L ++ GR++H++ + G D+F SAL+DMY+KC
Sbjct: 622 IQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKC 681
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G ++DA +F+ ++ SWN +I Y +HG +++ FE ML+EG +EVT I VL
Sbjct: 682 GCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVL 741
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
SACSH GL+E+G + F S+ + YG+ + EHYAC+VD+L R+G+ E + ++ +
Sbjct: 742 SACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSN 801
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
+ C +HG + + FE+ +++LSN+ AA G W + N+R +
Sbjct: 802 VLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRAL 861
Query: 513 MKEKNVQKQPGFSRVE 528
M + V+K+PG S VE
Sbjct: 862 MSTRGVKKEPGCSWVE 877
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 220/423 (52%), Gaps = 36/423 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C L +GK +H + + +N S L + LV VYA CG N A VF +IP +
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
V ++W + + F G A+ F MR N+FT++ LKAC LD++ GKQV
Sbjct: 194 V--VSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQV 251
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA A ++G +D+ VG+AL+D+Y+KCG + A RVF M +++ VSW ++++G+ +
Sbjct: 252 HAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDA 311
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA---------------------- 233
++ + LF RM + ++FT + ++ A G+ A
Sbjct: 312 EKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCL 371
Query: 234 FAFFSRMTAEG-----FV----PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+S+ G FV PD+V+W+A+I+ Q + EA ++FK M SG+ PN
Sbjct: 372 VDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQ 431
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
T+ ++ A G + G IHA VC+ G D +AL+ MY K GS++D +FE
Sbjct: 432 FTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEA 491
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
T +++ SWNA++ + + D+ + +F +ML EG N T IS+L +CS V+ G
Sbjct: 492 TTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 551
Query: 405 LEI 407
++
Sbjct: 552 KQV 554
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 166/327 (50%), Gaps = 39/327 (11%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+S +L+ C D+ +GK +H + G D + N+L+++Y+KCG A +VF +
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------ 217
ERDVVSWT++I+G+ AV LF M+ EG+E N+FTY
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 218 -----------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
+A++ YA+ G+ A F M + + V+WNA+++GFA
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQ----NAVSWNALLNGFA 306
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q + L LF M S I + T++ VL+ +G+++ G+ +H+L R+G +D F
Sbjct: 307 QMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEF 366
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
L+DMYSKCG DA +F +V SW+A+I C + G + E+F+RM G
Sbjct: 367 ISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSG 426
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEI 407
+ N+ TL S++SA + G + G I
Sbjct: 427 VIPNQFTLASLVSAATDLGDLYYGESI 453
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 279/527 (52%), Gaps = 42/527 (7%)
Query: 44 LNIFSLKSKLVGVYAGCGDVNSARLVF-DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS 102
+++ S + L+ +Y+ C + A LVF D NVF N ++ G + ++
Sbjct: 7 IHLPSSITSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYK 66
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
MR +KFTF V++AC ++++K +H +MG E +V VG+AL++ Y K
Sbjct: 67 RMRSVGVMPDKFTFPCVVRACCEFMEVRK---IHGCLFKMGLELNVFVGSALVNTYLKVD 123
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
A +VF + ERDVV W +MI+GY + +++AVV+F+RM EG+ ++FT +I++
Sbjct: 124 GTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILS 183
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVP-------------------------------DLVT 251
GD N A +T G+ DL +
Sbjct: 184 ILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFS 243
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
WN++IS Q + L+LF ML S + P+ +T+T VL A ++ GREIH +
Sbjct: 244 WNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMI 303
Query: 312 RMGLHI-----DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
GL DV +A++DMY+KCG +K+A +F++ R K+VASWN MI Y HG
Sbjct: 304 VNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYG 363
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
++++F RM E ++ + VT + VLSACSH G V +G M+ +GV + EHY C
Sbjct: 364 TEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTC 423
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
++DML R+G + EAYDL +++P+ + A C +HG +L +GE+ ++ +
Sbjct: 424 IIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKITQLEPKH 483
Query: 487 --PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
++++S++ G + EA +R+ MKE+NV+K PG S +E ++
Sbjct: 484 CGSGSYILMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIELKD 530
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 183/418 (43%), Gaps = 54/418 (12%)
Query: 43 DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS 102
+LN+F + S LV Y A VF+++P +V + N M+ G+ +A+ F
Sbjct: 106 ELNVF-VGSALVNTYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFK 164
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M E ++FT + +L + DI G+ +H + T+MG+ + V+V NALIDMY KC
Sbjct: 165 RMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCK 224
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----- 217
A +F + E+D+ SW S+IS + D + LF +M + P+ T
Sbjct: 225 HTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLP 284
Query: 218 -----------------------------------NAIIASYARRGDSNAAFAFFSRMTA 242
NAI+ YA+ G A F M
Sbjct: 285 ACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRN 344
Query: 243 EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI 302
+ D+ +WN MI G+A EAL +F M + IKP+ VT GVL A G +
Sbjct: 345 K----DVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQ 400
Query: 303 GREIHALVCRMGLHIDVFTG----SALIDMYSKCGSLKDARTLFE-ITRIKNVASWNAMI 357
GR + + RM L V + +IDM + G L +A L + I N+ W A++
Sbjct: 401 GR---SFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALL 457
Query: 358 GCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
G HG + + E++ + E + I + S G E+ LE+ R+MKE+
Sbjct: 458 GACRLHGNAELGNVVGEKITQLEPKHCGSGSYILMSSLYGVVGRYEEALEVRRTMKEQ 515
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 190/416 (45%), Gaps = 55/416 (13%)
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMF-ERDVVSWTSMISGYCNVSKVDEAVVL 201
GF + S +LI+MYS+C + A VF + ER+V ++ ++I+G+ +
Sbjct: 5 GFIHLPSSITSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQF 64
Query: 202 FERMKLEGLEPNQFTY--------------------------------NAIIASYARRGD 229
++RM+ G+ P++FT+ +A++ +Y +
Sbjct: 65 YKRMRSVGVMPDKFTFPCVVRACCEFMEVRKIHGCLFKMGLELNVFVGSALVNTYLKVDG 124
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+ A F + D+V WNAMI+G+ + N+A+ +FK M GI + T T
Sbjct: 125 TEDAEKVFEELPER----DVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTS 180
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
+L G I GR IH +V +MG V +ALIDMY KC +DA +FE+ K+
Sbjct: 181 ILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKD 240
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ SWN++I + + D ++ LF +ML + + +T+ +VL ACSH + G EI
Sbjct: 241 LFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHG 300
Query: 410 SM------KERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFR 460
M K G + + ++DM + G M A +DL+R + N M +
Sbjct: 301 YMIVNGLGKNENGDDVLLNN--AIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYA 358
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMK 514
+HG A+ M E + KPD FV + + C+ G H+ + M+
Sbjct: 359 ----MHGYGTEALDMFHRMCEAQI-KPDVVTFVGVLSACSHAGFVHQGRSFLTRME 409
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 164/516 (31%), Positives = 271/516 (52%), Gaps = 45/516 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C +AL +G+++H+ + L + + L+ +Y C V AR +FD++ +
Sbjct: 264 LLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRD 323
Query: 78 VFMLNWMVMASAFTG-----NFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
V + M+ A +G + E MR NK TF +L+AC +++G
Sbjct: 324 VISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQG 383
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+Q+HA +++GFE D S+ A+ +MY+KCG + A +VF M ++VV+WTS +S Y
Sbjct: 384 RQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKC 443
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
GD ++A FS M ++V+W
Sbjct: 444 -----------------------------------GDLSSAEKVFSEMPTR----NVVSW 464
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N MI+G+AQ+ + +L M G +P+ VTV +L+A G ++ G+ +HA +
Sbjct: 465 NLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVK 524
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
+GL D ++LI MYSKCG + +ART+F+ ++ +WNAM+ YG+HG +++L
Sbjct: 525 LGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDL 584
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F+RML+E + NE+TL +V+SACS GLV++G EIFR M+E + + K+HY C+VD+L
Sbjct: 585 FKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLG 644
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
R+GR+ EA + ++ +P S+ A C H LA E+ ++
Sbjct: 645 RAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYIT 704
Query: 493 LSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
LSNI A G W ++ +R++M ++ ++K G S +E
Sbjct: 705 LSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIE 740
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 151/523 (28%), Positives = 241/523 (46%), Gaps = 84/523 (16%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDK 72
N C++ C K++ GK VH L + I L + L+ Y+ DV SA VF +
Sbjct: 57 NTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRR 116
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGY--FSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ +V + W M +A+ GN A + F M + N+ TF +LKAC ++
Sbjct: 117 MTLRDV--VTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILE 174
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
KG+++H + MG E DV+V ALI MYSKCG + A VFH M ER+VVSWT++I
Sbjct: 175 KGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANA 234
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
K++EA L+E+M G+ PN T+
Sbjct: 235 QHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMI 294
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE-----NEALK 270
NA+I Y + A F RM+ D+++W+AMI+G+AQS + +E +
Sbjct: 295 VANALITMYCKCNSVQEAREIFDRMSKR----DVISWSAMIAGYAQSGYKDKESIDEVFQ 350
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
L + M G+ PN VT +L+A G+++ GR+IHA + ++G +D +A+ +MY+
Sbjct: 351 LLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYA 410
Query: 331 KCGS-------------------------------LKDARTLFEITRIKNVASWNAMIGC 359
KCGS L A +F +NV SWN MI
Sbjct: 411 KCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAG 470
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
Y ++G + EL M EG + + VT+I++L AC +E+G ++ + + G++
Sbjct: 471 YAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERG-KLVHAEAVKLGLES 529
Query: 420 SKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
++ M + G++ EA +D + N+M +
Sbjct: 530 DTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGY 572
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 198/389 (50%), Gaps = 45/389 (11%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G +EAI ++++ N T+ V++ C + GK VH ++G E D+ +G
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N+LI+ YSK + SA +VF M RDVV+W+SMI+ Y + +A FERM +E
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154
Query: 212 PNQFTY-----------------------------------NAIIASYARRGDSNAAFAF 236
PN+ T+ A+I Y++ G+ + A
Sbjct: 155 PNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEV 214
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F +MT ++V+W A+I AQ ++ NEA +L++ ML +GI PN VT +L +
Sbjct: 215 FHKMTER----NVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNT 270
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
++ GR IH+ + GL D+ +ALI MY KC S+++AR +F+ ++V SW+AM
Sbjct: 271 PEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAM 330
Query: 357 IGCYGKHGM-----VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
I Y + G +D +L ERM EG+ N+VT +S+L AC+ G +E+G +I +
Sbjct: 331 IAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAEL 390
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ G ++ + + +M + G + EA
Sbjct: 391 S-KVGFELDRSLQTAIFNMYAKCGSIYEA 418
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 184/552 (33%), Positives = 282/552 (51%), Gaps = 37/552 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL SK Q Q+HA L T +L + F+ L V + +VN A LVF +I P
Sbjct: 14 LLSLLQXSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQP 73
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N F+ N MV + + A+ +++ MR+ + +T+ VLKAC + + +G V
Sbjct: 74 NSFICNTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQ 133
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + GF DV V N LI MY +CG AR VF G E+D+VSW SM+ GY +++
Sbjct: 134 GEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEME 193
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARR-GDSNAAFAFFSRMTAEGFVP-------- 247
A +F+ M E + +++ +I Y ++ G+ N A FF M V
Sbjct: 194 NAQNMFDEMP----ERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGY 249
Query: 248 -------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
++++W+ MI G+A + EAL LF+ ML GIKP+ V+V
Sbjct: 250 AKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVV 309
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
G + A G++ GR IH + R + +D+ +AL+DMY KCGS +AR +F +
Sbjct: 310 GAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPER 369
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
NV SWN MI G +G ++E F +M E + +++ + VL ACSH LV +GL IF
Sbjct: 370 NVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIF 429
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
MK Y ++ EHY C+VD+L R+G++ + ++++ +PM ++ G+ C IH
Sbjct: 430 NQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQN 489
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
LA + E E+ +V++SNI A G W +RK+MKE+ ++K G S +E
Sbjct: 490 VTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIE 549
Query: 529 ---KRNEFVEKE 537
EFV E
Sbjct: 550 VDGNVEEFVSGE 561
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 271/529 (51%), Gaps = 58/529 (10%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQV-HALLCTNDLNIFSLKSKLVGVYAGCGDV 63
IFP+N + + +C++S + +V H + N + SL L+G+ +
Sbjct: 61 IFPLNKI--------IARCVRSGDIDGALRVFHGMRAKNTITWNSL---LIGISKDPSRM 109
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
A +FD+IP P+ F N M+ NF++A +F
Sbjct: 110 MEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFD--------------------- 148
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+M F+ D + N +I Y++ G + AR +F+ M E++ VSW
Sbjct: 149 -----------------RMPFK-DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWN 190
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE 243
+MISGY +++A F+ + G+ + A+I Y + A A F MT
Sbjct: 191 AMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKKVELAEAMFKDMTVN 246
Query: 244 GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
+LVTWNAMISG+ ++ R + LKLF+ ML GI+PN+ ++ L ++Q+G
Sbjct: 247 K---NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLG 303
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
R+IH +V + L DV ++LI MY KCG L DA LFE+ + K+V +WNAMI Y +H
Sbjct: 304 RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQH 363
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
G D ++ LF M++ +R + +T ++VL AC+H GLV G+ F SM Y V+ +H
Sbjct: 364 GNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH 423
Query: 424 YACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMG 483
Y C+VD+L R+G++ EA L+R +P ++ G C +H +LA E+ ++
Sbjct: 424 YTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLN 483
Query: 484 LRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ G+V L+NI A+ W + +RK MKE NV K PG+S +E RN+
Sbjct: 484 SQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNK 532
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 165/523 (31%), Positives = 286/523 (54%), Gaps = 48/523 (9%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+ + L+ +Y G V +AR++FD++P ++ N M+ +GN +EA+ +R
Sbjct: 187 VAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAM- 245
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ T +L AC D +G +H+ + + G E+++ V N LID+Y++ G L +
Sbjct: 246 ---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQ 302
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
+VF M+ RD++SW S+I Y + A++LF+ M+L ++P+ T
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 218 -------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
NA++ YA+ G ++A A F+ + + D+++W
Sbjct: 363 EIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNK----DVISW 418
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSG--IKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
N +ISG+AQ+ +EA++++ M G I N T VL A G+++ G ++H +
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRL 478
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSS 369
+ GL++DVF G++L DMY KCG L DA +LF +I R+ +V WN +I C+G HG + +
Sbjct: 479 LKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVP-WNTLIACHGFHGHGEKA 537
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+ LF+ ML+EG++ + +T +++LSACSH GLV++G F M+ YG+ S +HY C+VD
Sbjct: 538 VMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVD 597
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
+ R+G++ A + ++ +P+ S+ GA + C +HG DL E FE+
Sbjct: 598 LYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 657
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
V+LSN+ A+ G+W + +R I K ++K PG+S +E N+
Sbjct: 658 HVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNK 700
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 162/526 (30%), Positives = 256/526 (48%), Gaps = 52/526 (9%)
Query: 29 LRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+ K +HA L+ +N + + +KLV +Y G+V AR FD I N +V+ N M+
Sbjct: 67 LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISG 126
Query: 88 SAFTGNFQEAIGYFSL-MREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
G E I FSL M + + TF VLKAC + D G ++H +A + GF
Sbjct: 127 YGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMW 183
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
DV V +LI +Y + G + +AR +F M RD+ SW +MISGYC EA+ L + ++
Sbjct: 184 DVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLR 243
Query: 207 L-------------------------------EGLEPNQFTYNAIIASYARRGDSNAAFA 235
GLE F N +I YA G
Sbjct: 244 AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQK 303
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F RM +V DL++WN++I + +++ A+ LF+ M +S I+P+ +T+ +
Sbjct: 304 VFDRM----YVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILS 359
Query: 296 LTGSIQIGREIHALVCRMGLHI-DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
G I+ R + R G + D+ G+A++ MY+K G + AR +F K+V SWN
Sbjct: 360 QLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWN 419
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEG--MRANEVTLISVLSACSHGGLVEKGLEIF-RSM 411
+I Y ++G +IE++ M EEG + AN+ T +SVL ACS G + +G+++ R +
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLL 479
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN-IHGRRD 470
K G+ + + DM + GR+ +A L Q+P NS+ C+ HG +
Sbjct: 480 KN--GLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPR--VNSVPWNTLIACHGFHGHGE 535
Query: 471 LAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMK 514
AV + +E + G+ KPD FV L + C+ G E E ++M+
Sbjct: 536 KAVMLFKEMLDEGV-KPDHITFVTLLSACSHSGLVDEGEWCFEMMQ 580
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 137/305 (44%), Gaps = 41/305 (13%)
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+++ K +HA +V + L+++Y G + AR F + RDV +W MIS
Sbjct: 66 NLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMIS 125
Query: 188 GYCNVSKVDEAVVLFERMKL-EGLEPNQFTYNAIIAS----------------------- 223
GY E + F L GL+P+ T+ +++ +
Sbjct: 126 GYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNKIHCLALKFGFMWDV 185
Query: 224 ---------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
Y R G A F M D+ +WNAMISG+ QS EAL L G
Sbjct: 186 YVAASLIHLYCRYGAVVNARILFDEMPTR----DMGSWNAMISGYCQSGNAKEALTLSDG 241
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
+ ++VTV +L A G G IH+ + GL ++F + LID+Y++ GS
Sbjct: 242 LRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGS 297
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
LKD + +F+ ++++ SWN++I Y + +I LF+ M ++ + +TLIS+ S
Sbjct: 298 LKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASI 357
Query: 395 CSHGG 399
S G
Sbjct: 358 LSQLG 362
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 255/491 (51%), Gaps = 34/491 (6%)
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
PN+ + ++ A G +EA+ M+ + N T + VL AC L ++ GK++
Sbjct: 9 PNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKEI 68
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H T+ GF ++ V N L+D+Y +C + SA ++F G ++VVS+ +MI GYC V
Sbjct: 69 HGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNV 128
Query: 196 DEAVVLFERMKLEG---------------------------------LEPNQFTYNAIIA 222
++A LF++M+L G E + T+N +I+
Sbjct: 129 EKAKELFDQMELVGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTATWNVLIS 188
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA +M +GF P++ TWN +ISG ++ AL+LF M S ++P
Sbjct: 189 GYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRP 248
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ TV +L A +I G+++HA R G +DV G+AL+DMY+KCGS+K A ++
Sbjct: 249 DIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVY 308
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
N+ S NAM+ Y HG D I LF ML G R + VT +SVLS+C H G VE
Sbjct: 309 NRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVE 368
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
G E F M Y V S +HY C+VD+L R+GR+ EAY+L++++P + M GA G
Sbjct: 369 TGHEFFDLMT-YYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGG 427
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C I G +L E E+ +V+L+N+ A G WH+ + R+++K++ + K P
Sbjct: 428 CVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSP 487
Query: 523 GFSRVEKRNEF 533
G S +E R +
Sbjct: 488 GCSWIEDREDI 498
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 131/256 (51%), Gaps = 7/256 (2%)
Query: 53 LVGVYAGCGDVNSARLVFDKIP----NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
L+ YA C + + + + K+ PNV+ N ++ G+ + A+ F+ M+
Sbjct: 186 LISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSS 245
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
R + +T I+L AC L I +GKQVHA + + G+E DV +G AL+DMY+KCG + A
Sbjct: 246 LRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAM 305
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
+V++ + ++VS +M++ Y DE + LF M G P+ T+ ++++S G
Sbjct: 306 QVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAG 365
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
FF MT P L + ++ +++ R +EA +L K + KP++V
Sbjct: 366 AVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKI---PRKPDSVMWG 422
Query: 289 GVLQAGGLTGSIQIGR 304
+L + G++++G
Sbjct: 423 ALLGGCVIWGNVELGE 438
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 81/135 (60%)
Query: 242 AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
+E P+LV+W+A+I GFAQ+ + EAL+L M +G +PN T+ VL A ++
Sbjct: 4 SENSKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLN 63
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
+G+EIH V R G + F + L+D+Y +C + A +F +KNV S+N MI Y
Sbjct: 64 LGKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYC 123
Query: 362 KHGMVDSSIELFERM 376
++G V+ + ELF++M
Sbjct: 124 ENGNVEKAKELFDQM 138
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 179/506 (35%), Positives = 271/506 (53%), Gaps = 11/506 (2%)
Query: 26 SKALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGC--GDVNSARLVFDKIPNPNVFMLN 82
S +L KQVHA+ L T + LV YA ++N A VF+ +PNPNVF+ N
Sbjct: 40 STSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFN 99
Query: 83 WMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
++ +AI + M R NKFT+ + KAC ++G QVHA +
Sbjct: 100 IIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQ 159
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G DV + +A I MY G + ARR+ DV+ + +MI GY +V+ A LF
Sbjct: 160 GLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELF 219
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
M+ + N ++N +++ A+ G A F+ M + + ++W+AMI G+ +
Sbjct: 220 WSME----DKNVGSWNVMVSGMAKCGMIEEARELFNEMKEK----NEISWSAMIDGYIKG 271
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
EAL++F M I+P ++ VL A G++ GR IHA V D G
Sbjct: 272 GYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLG 331
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+AL+DMY+KCG L A +FE K V +WNAMI G HG + +IELF +M ++ R
Sbjct: 332 TALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFR 391
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
N +TL+ VLSAC+H G+V++GL IF SM+E YG++ EHY CVVD+L R+G + EA +
Sbjct: 392 PNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEE 451
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
++ +PM + ++ GA C HG +L +G+ E+ + + +LSNI A G
Sbjct: 452 VMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGR 511
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVE 528
W + N+RK+MKE+ V+ G S ++
Sbjct: 512 WDDVANVRKLMKERGVKTSTGISMID 537
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 12/220 (5%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKI 73
L +L C AL QG+ +HA + N+ N F L + LV +YA CG ++ A VF+K+
Sbjct: 296 LSSVLAACANLGALDQGRWIHAYV-NNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKM 354
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
VF N M+ G ++AI F M++ +R N T VL AC + +G
Sbjct: 355 EKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGL 414
Query: 134 QV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
++ +++ G E + ++D+ + GLL A V + M E W +++ G C
Sbjct: 415 RIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALL-GAC- 472
Query: 192 VSKVDEAVVLFERMK--LEGLEPNQFTYNAIIAS-YARRG 228
+ V L ER+ L LEP A++++ YAR G
Sbjct: 473 --RKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAG 510
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 170/527 (32%), Positives = 273/527 (51%), Gaps = 49/527 (9%)
Query: 47 FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE 106
F + A + N L +V+ N ++ A G+ E++ FS MR+
Sbjct: 16 FKIHKNHFSTTAAATNTNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRK 75
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
+ N+ TF +K+C L D+ GKQ H A GFE+D+ V +ALIDMYSKCG L +
Sbjct: 76 LDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSN 135
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE------------------ 208
AR +F + R++V+WTS+I+GY EA+++F+ E
Sbjct: 136 ARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAM 195
Query: 209 --------------------------GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA 242
GL+ N ++ +YA+ G+ + + F M
Sbjct: 196 ISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAE 255
Query: 243 EGFVPDLVTWNAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQ 301
+ D+V+WN+MI+ +AQ+ +A ++F GML G K N VT++ +L A G+++
Sbjct: 256 K----DVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALR 311
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
+G +H V +MG +V +++IDMY KCG + AR F+ + KNV SW AMI YG
Sbjct: 312 VGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYG 371
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
HG ++++F +M+ G++ N +T ISVL+ACSH G +E+G F +M Y V+
Sbjct: 372 MHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGV 431
Query: 422 EHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFE 481
EHY C+VD+L R+G + EAY+L++ + + + G+ C IH +LA E F+
Sbjct: 432 EHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFK 491
Query: 482 MGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ +V+L+NI A G W + E +R ++K++ + K PG+S VE
Sbjct: 492 LDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVE 538
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 138/264 (52%), Gaps = 7/264 (2%)
Query: 19 LLGKCMK--SKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C + +KA+ +G VH + L+ + +++ L+ YA CG+V+ +R VFD +
Sbjct: 198 VLSACSRVSNKAVSEG--VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAE 255
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+V N M+ A G +A F +++ + N+ T S +L AC ++ G
Sbjct: 256 KDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMC 315
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H +MG+ N+V + ++IDMY KCG AR F GM E++V SWT+MI+GY
Sbjct: 316 LHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGF 375
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWN 253
EA+ +F +M G++PN T+ +++A+ + G + +F+ M+ E V P + +
Sbjct: 376 AREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYG 435
Query: 254 AMISGFAQSKRENEALKLFKGMLV 277
M+ ++ EA L K M V
Sbjct: 436 CMVDLLGRAGYIKEAYNLIKSMKV 459
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 6/217 (2%)
Query: 16 LDCLLGKCMKSKALRQGKQVH-ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L LL C ALR G +H ++ +N + + ++ +Y CG AR FD +
Sbjct: 297 LSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMK 356
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-K 133
NV M+ G +EA+ F M + N TF VL AC +++G +
Sbjct: 357 EKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWR 416
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+A++ + E V ++D+ + G + A + M RD V W S+++ C +
Sbjct: 417 WFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAA-CRI 475
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-YARRG 228
K E + R +L L+P+ Y ++A+ YA G
Sbjct: 476 HKDVELAEISAR-ELFKLDPSNCGYYVLLANIYADAG 511
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 182/577 (31%), Positives = 288/577 (49%), Gaps = 51/577 (8%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSA 66
NN + +L C K L + +H + + +I+ +++ +V +Y CG V+ A
Sbjct: 51 NNFTFPFLS---KACAKLSHLTNSQIIHTHVVKSPFYSDIY-VQTAMVDMYVKCGKVDDA 106
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
+FDK+P N+ N M++ + G+ F MR R + T + +A +
Sbjct: 107 YNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISA 166
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE--RDVVSWTS 184
++ K VHA+ + G + D SV N I YSKCG L A+ VFHG+ + R VSW S
Sbjct: 167 KSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNS 226
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------- 217
+I+ Y + K +AV ++ + +G +P+ T
Sbjct: 227 LIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLG 286
Query: 218 --------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
N +I+ Y+R GD ++A F M+ + V+W AMISG+++ R ++AL
Sbjct: 287 CDSDISLINTLISMYSRCGDISSATILFDGMS----IRTCVSWTAMISGYSEVGRVDDAL 342
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
LF M +G KP+ VTV ++ G TG++ +G I L DV +ALIDMY
Sbjct: 343 VLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMY 402
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
+KCGSL DAR +F + V SW AMI +G +++LF + E G+ N +T +
Sbjct: 403 AKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFL 462
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
+VL AC HGG +EKG E F M ERYG+ +HY+C++D+L R G+++EA ++++ +PM
Sbjct: 463 AVLQACCHGGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPM 522
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENL 509
+ GA C IH ++ + FE+ R FV ++NI A+ G W E +
Sbjct: 523 KPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAM 582
Query: 510 RKIMKEKNVQKQPGFSRVEKRNE----FVEKEVQNES 542
RK M+ ++K PG S V+ FVE ++S
Sbjct: 583 RKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRSHHDS 619
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 203/442 (45%), Gaps = 48/442 (10%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
GN +A+ F ++ + N FTF + KAC L + + +H + F +D+ V
Sbjct: 31 GNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVVKSPFYSDIYVQ 90
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
A++DMY KCG + A +F M R++ SW +MI G+ + +D LF M+L G
Sbjct: 91 TAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTR 150
Query: 212 PNQFTY-----------------------------------NAIIASYARRGDSNAAFAF 236
P+ T N IA+Y++ G+ A
Sbjct: 151 PDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMV 210
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F + + V+WN++I+ +A + +A+K +KG+L G KP+ T+ +L +
Sbjct: 211 FHGI--QKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQ 268
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
++ G IH ++G D+ + LI MYS+CG + A LF+ I+ SW AM
Sbjct: 269 PEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAM 328
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG--LEIFRSMKER 414
I Y + G VD ++ LF M E G + + VT++S++S C G + G ++ + S+ E
Sbjct: 329 ISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHE- 387
Query: 415 YGVKISKEHYAC--VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLA 472
+ K+ C ++DM + G + +A ++ +P S A C ++G A
Sbjct: 388 ----LKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWT-AMIAACALNGEFREA 442
Query: 473 VTMGEEFFEMGLRKPDGFVMLS 494
+ + E G+ +P+ L+
Sbjct: 443 LDLFSLLSESGI-EPNNITFLA 463
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 154/352 (43%), Gaps = 44/352 (12%)
Query: 182 WTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------ 217
W S I G N +A+ LF ++KL GL+PN FT+
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 218 -----------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
A++ Y + G + A+ F +M V ++ +WNAMI GF+Q +
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMP----VRNIASWNAMIIGFSQIGSLD 135
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
LF GM + G +P+ TV G+ +A S++ + +HA+ GL D + I
Sbjct: 136 RVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWI 195
Query: 327 DMYSKCGSLKDARTLFEITR--IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
YSKCG L+ A+ +F + ++ SWN++I CY G +++ ++ +L +G + +
Sbjct: 196 AAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPD 255
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
T+IS+LS+C + G + + G ++ M R G + A L
Sbjct: 256 ASTIISLLSSCQQPEALIYGF-LIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILF 314
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
+ + S A +G + GR D A+ + E G KPD +LS I
Sbjct: 315 DGMSIRTCVSWT-AMISGYSEVGRVDDALVLFNAMEETG-EKPDIVTVLSLI 364
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 11/184 (5%)
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
L WN+ I G ++AL LF + ++G++PNN T + +A + + IH
Sbjct: 17 LTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHT 76
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
V + + D++ +A++DMY KCG + DA LF+ ++N+ASWNAMI + + G +D
Sbjct: 77 HVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDR 136
Query: 369 SIELFERMLEEGMRANEVTLI----SVLSACS-------HGGLVEKGLEIFRSMKERYGV 417
LF M G R + T+I +V+SA S H +E GL+ S+ +
Sbjct: 137 VFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIA 196
Query: 418 KISK 421
SK
Sbjct: 197 AYSK 200
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 180/546 (32%), Positives = 277/546 (50%), Gaps = 36/546 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C SK Q Q+ A + N + KLV + A + AR +FD+IP+PN
Sbjct: 44 LLQSCKTSK---QVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPN 100
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ + N M A + +++E + F M+ R N FTF +VLK+C + + +G+QVH
Sbjct: 101 IALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHC 160
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ GF + VG LIDMYS G + A ++F MFER+VV+WTSMI+GY + +
Sbjct: 161 FLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVS 220
Query: 198 AVVLF-------------------------ERMKLEGLEPNQ--FTYNAIIASYARRGDS 230
A LF E KL PN+ +N ++ YA G+
Sbjct: 221 ARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNV 280
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV-SGIKPNNVTVTG 289
A F M ++ +WNA+I G+A + E L FK ML S + PN+ T+
Sbjct: 281 EALEGLFEEMPER----NIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVT 336
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
VL A G++ +G+ +H GL +V+ G+AL+DMY+KCG +++A ++F K+
Sbjct: 337 VLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKD 396
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ SWN +IG H ++ LF +M G + + +T I +L AC+H GLVE G F+
Sbjct: 397 LISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQ 456
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
SM + Y + EHY C+VDML R+GR+ +A +R++P+ + C I+
Sbjct: 457 SMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNV 516
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEK 529
+LA + E+ + P +VMLSNI G W + L+ M++ +K PG S +E
Sbjct: 517 ELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEV 576
Query: 530 RNEFVE 535
+ VE
Sbjct: 577 NDAVVE 582
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 279/530 (52%), Gaps = 18/530 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGC---GDVNSARLVFDKIPN 75
L KC K+LR KQ+ AL+ LN + L S + ++ ++ AR +F I N
Sbjct: 11 LFSKC---KSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRN 67
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
P+VFM N ++ + + A+ F M R+ + + F+F+ +LKA + G Q
Sbjct: 68 PDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQ 127
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H +A G ++ + VG LI MY++C L AR+VF M E ++V+W ++++
Sbjct: 128 LHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEG 187
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
V +A +F M + L ++N ++A Y + G+ A F +M + D V+W+
Sbjct: 188 VKDAEQVFRCMPIRNLT----SWNIMLAGYTKAGELQLAREVFMKMP----LKDDVSWST 239
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MI GFA + N+A F+ + G++PN V++TGVL A G+ + GR +H V + G
Sbjct: 240 MIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSG 299
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+ +ALID YSKCG+L AR +F+ ++ SW AMI HG + +I LF
Sbjct: 300 FLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFN 359
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
M E ++ + +T IS+L ACSH GLV+ G F M YG++ EHY C+VD+ R+
Sbjct: 360 EMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRA 419
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
G++ +AYD + Q+P+ + + C+IHG LA + + E+ V+LS
Sbjct: 420 GKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLS 479
Query: 495 NICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFVEKEVQNE 541
NI A G+W + LR+ M + ++K PG+S +E FV E QN+
Sbjct: 480 NIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQND 529
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 293/553 (52%), Gaps = 44/553 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C + +Q+HA + ++ ++ L+ +Y + A VF +I +
Sbjct: 205 IVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKD 264
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+++W M + F+ G EA+ +F ++ + +Y+ N+F F AC LL+ G+Q
Sbjct: 265 --LISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQ 322
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + + G +D+ G +L DMY+KCG L SAR VF+ + + D+V+W ++I+G+ +VS
Sbjct: 323 IHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSN 382
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
E+ F +M+ GL PN T N+
Sbjct: 383 AKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNS 442
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+++ Y++ + N A F + G D+V+WN +++ Q + E L+L K M S
Sbjct: 443 LLSMYSKCSNLNDALQVFEDI---GNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASR 499
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
IKP++VT+T VL + G S ++G +IH + + GL++D+ +ALI+MY+KCGSL+ AR
Sbjct: 500 IKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECAR 559
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ ++ SW+++I Y + G + ELF M G++ NE+T + +L+ACSH G
Sbjct: 560 KMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIG 619
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
+VE+GL+++R+M+E Y + +KEH +C+VD+L R+G + A D ++Q+P +
Sbjct: 620 MVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTL 679
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C +HG ++ E ++ VML NI A+ G W + LR M+ +V
Sbjct: 680 LAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVG 739
Query: 520 KQPGFSRVEKRNE 532
K PG S +E +++
Sbjct: 740 KVPGQSWIEIKDK 752
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 151/553 (27%), Positives = 258/553 (46%), Gaps = 66/553 (11%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVH-ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
SV Y L+ C ++L G+++H +L N L++ ++ +Y CG + AR +F
Sbjct: 98 SVTYTH-LINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMF 156
Query: 71 DKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
D +P NV ++W M S ++ G AI + M + + FTF ++K+C GL D
Sbjct: 157 DSMPLKNV--VSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDD 214
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
K +Q+HA + F D+ NALI MY+K + A VF + +D++SW SMI+G
Sbjct: 215 FKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAG 274
Query: 189 YCNVSKVDEAVVLFERMKLEGL-EPNQFTYNAIIASYARRGDSNAA---------FAFFS 238
+ + EA+ F M + + +PN+F + + ++ ++ + + F S
Sbjct: 275 FSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGS 334
Query: 239 RMTAE----------GFV------------PDLVTWNAMISGFAQSKRENEALKLFKGML 276
+ A GF+ PDLV WNA+I+GFA E+ F M
Sbjct: 335 DLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMR 394
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+G+ PN+VTV +L A + G ++H+ + +MG ++D+ ++L+ MYSKC +L
Sbjct: 395 HTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLN 454
Query: 337 DARTLFE-ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
DA +FE I ++ SWN ++ + + L + M ++ + VTL +VL +
Sbjct: 455 DALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSS 514
Query: 396 SHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV--PMYVT 452
E G +I MK + IS + +++M + G + A + + P ++
Sbjct: 515 GQIASYEVGSQIHCFIMKSGLNLDISVSN--ALINMYTKCGSLECARKMFDSIGNPDIIS 572
Query: 453 NS--MAGAFRNGCNIHGRRDLAVTMGEEFFEM-----GL-RKPD--GFVMLSNICAADGE 502
S + G + GC G+E FE+ GL KP+ FV + C+ G
Sbjct: 573 WSSLIVGYAQAGC------------GKEAFELFRTMRGLGVKPNEITFVGILTACSHIGM 620
Query: 503 WHEAENLRKIMKE 515
E L + M+E
Sbjct: 621 VEEGLKLYRTMQE 633
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKP-NNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
I + EALK F P +VT T ++ A S++ GR+IH +
Sbjct: 69 IISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCN 128
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
D+ + ++ MY KCGSLK+AR +F+ +KNV SW +MI Y ++G D++I L+
Sbjct: 129 YQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYV 188
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA------CVV 428
+ML G + T S++ +CS GL+ F+ ++ + + E A ++
Sbjct: 189 QMLRSGHIPDHFTFGSIVKSCS-------GLDDFKLARQLHAHVLKSEFGADLIAQNALI 241
Query: 429 DMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
M + +M +A ++ ++ + S G+ G + G A+ E + +P+
Sbjct: 242 SMYTKFSQMADAINVFSRIIIKDLISW-GSMIAGFSQLGYELEALCHFREMLSQSVYQPN 300
Query: 489 GFV 491
FV
Sbjct: 301 EFV 303
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 288/546 (52%), Gaps = 50/546 (9%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C + LR + VH + + +L + L+ +Y+ CGD+ S+ +F+KI N +
Sbjct: 770 CAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNA--V 827
Query: 82 NWMVMASAFT-GNFQE-AIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHA 137
+W M S++ G F E A+ FS M + N T +L +C GL I++GK VH
Sbjct: 828 SWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGL--IREGKSVHG 885
Query: 138 VATQMGFE-NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + + N S+ AL+++Y++CG L + H + +R++V W S IS Y + V
Sbjct: 886 FAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVI 945
Query: 197 EAVVLFERMKLEGLEPNQFTY----------------------------------NAIIA 222
EA+ LF +M ++P+ FT N++I
Sbjct: 946 EALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVSDEFVQNSVID 1005
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y++ G N A F ++ +VTWN+M+ GF+Q+ EA+ LF M S ++
Sbjct: 1006 MYSKSGFVNLACTVFDQIKHRS----IVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEI 1061
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N VT V+QA GS++ GR +H + G+ D+FT +ALIDMY+KCG L A T+F
Sbjct: 1062 NKVTFLAVIQACSSIGSLEKGRWVHHKLIVCGIK-DLFTDTALIDMYAKCGDLNTAETVF 1120
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+++ SW++MI YG HG + S+I F +M+E G + NEV ++VLSAC H G VE
Sbjct: 1121 RAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVE 1180
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G F MK +GV + EH+AC +D+L RSG + EAY ++++P S+ G+ NG
Sbjct: 1181 EGKYYFNLMK-LFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 1239
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IH + D+ + + ++ + +LSNI A +GEW E +R MK N++K P
Sbjct: 1240 CRIHQKMDIIKAIKNDISDIVTDDTGYYTLLSNIYAEEGEWEEFRRMRSAMKSLNLKKVP 1299
Query: 523 GFSRVE 528
G+S +E
Sbjct: 1300 GYSAIE 1305
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 238/480 (49%), Gaps = 50/480 (10%)
Query: 28 ALRQGKQVHA-LLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+LR Q+HA LL T L L +KL+ YA G +S+RLVF+ P P+ FM ++
Sbjct: 571 SLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLI 630
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD-IKKGKQVHAVATQMGF 144
+ + AI + + + +KF F VL+AC G + + G++VH + G
Sbjct: 631 KCNVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGV 690
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
++D + +L+ MY + G L A +VF GM RD+V+W++++S +V +A+ +F+
Sbjct: 691 DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKC 750
Query: 205 MKLEGLEPNQFTY-----------------------------------NAIIASYARRGD 229
M +G+EP+ T N+++ Y++ GD
Sbjct: 751 MVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGD 810
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
++ F ++ + + V+W AMIS + + + +AL+ F ML SGI+PN VT+
Sbjct: 811 LLSSEKIFEKIAKK----NAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYS 866
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS-ALIDMYSKCGSLKDARTLFEITRIK 348
+L + GL G I+ G+ +H R L + + S AL+++Y++CG L D T+ + +
Sbjct: 867 ILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDR 926
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
N+ WN+ I Y GMV ++ LF +M+ ++ + TL S++SAC + GLV G +I
Sbjct: 927 NIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIH 986
Query: 409 RSMKERYGVKISKEHYA-CVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCN 464
+ +S E V+DM +SG + A +D ++ + NSM F N
Sbjct: 987 GHVIR---TDVSDEFVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGN 1043
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 148/553 (26%), Positives = 268/553 (48%), Gaps = 49/553 (8%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKA-LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAG 59
+RL+ +S +L C S+ L G++VH + + ++ + +++ L+ +Y
Sbjct: 647 HRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQ 706
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFS 117
G+++ A VFD +P + ++ W + S+ N + +A+ F M + + T
Sbjct: 707 TGNLSDAEKVFDGMPVRD--LVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMI 764
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
V++ C L ++ + VH T+ F+ D ++ N+L+ MYSKCG L S+ ++F + ++
Sbjct: 765 SVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKK 824
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-----YARRGDSNA 232
+ VSWT+MIS Y ++A+ F M G+EPN T +I++S R G S
Sbjct: 825 NAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVH 884
Query: 233 AFAFFSRMTA--EGFVP-------------------------DLVTWNAMISGFAQSKRE 265
FA + E P ++V WN+ IS +A
Sbjct: 885 GFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMV 944
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EAL LF+ M+ IKP++ T+ ++ A TG +++G++IH V R + D F +++
Sbjct: 945 IEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVS-DEFVQNSV 1003
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
IDMYSK G + A T+F+ + +++ +WN+M+ + ++G +I LF+ M + N+
Sbjct: 1004 IDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINK 1063
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY--ACVVDMLCRSGRMVEAYDL 443
VT ++V+ ACS G +EKG R + + V K+ + ++DM + G + A +
Sbjct: 1064 VTFLAVIQACSSIGSLEKG----RWVHHKLIVCGIKDLFTDTALIDMYAKCGDLNTAETV 1119
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICAADG 501
R + S + N +HGR A++ + E G KP+ V ++ + C G
Sbjct: 1120 FRAMSNRSIVSWSSMI-NAYGMHGRIGSAISTFNQMVESG-TKPNEVVFMNVLSACGHSG 1177
Query: 502 EWHEAENLRKIMK 514
E + +MK
Sbjct: 1178 SVEEGKYYFNLMK 1190
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 182/558 (32%), Positives = 294/558 (52%), Gaps = 52/558 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C K+ QG QVHA + + L+ +Y C V+ A VFD++ N
Sbjct: 10 LLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERN 69
Query: 78 VFMLNWMVMASAFTGNFQE--AIGYFSLMREFIY---RCNKFTFSIVLKACVGLLDIKKG 132
V ++W + G QE A G +L+ E Y + N+FTFS LKAC L ++ G
Sbjct: 70 V--VSWTAL---MCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENG 124
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
Q+H + + GFE VGNA IDMYSKCG + A +VF+ M R++VSW +MI+G+ +
Sbjct: 125 MQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHE 184
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTY----------------------------------- 217
+++VLF+RM+ +G P++FT+
Sbjct: 185 GNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNI 244
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
+AI+ YA+ G A F R+ + +L++W+A+I GFAQ EA+ LF+ +
Sbjct: 245 IASAIVDLYAKCGYLFEAQKVFDRIEQK----NLISWSALIQGFAQEGNLLEAMDLFRQL 300
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
S + ++ ++ ++ G+++H + ++ +D+ +++IDMY KCG
Sbjct: 301 RESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLT 360
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
++A LF +++NV SW MI YGKHG+ + +I LF RM +G+ +EV +++LSAC
Sbjct: 361 EEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSAC 420
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH GL+ + E F + + +K + EHYAC+VD+L R+G++ EA +L+ + + +
Sbjct: 421 SHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGI 480
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
+ C +HG ++ +GE F M P +VM+SNI A G W E E +RK++K
Sbjct: 481 WQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKA 540
Query: 516 KNVQKQPGFSRVEKRNEF 533
K ++K+ G S VE E
Sbjct: 541 KGLKKEAGQSWVEINKEI 558
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 182/555 (32%), Positives = 280/555 (50%), Gaps = 42/555 (7%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARL 68
LS N L ++ + ++ G+ HA + F L + LV +YA +NSA+L
Sbjct: 4 LSQNSLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKL 63
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
+ + P +V ++ S G F A+ +FS M R N FTF VLKA GL
Sbjct: 64 ILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRM 123
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
GKQ+HA+A + G NDV VG ++ DMYSK G L A +VF M R++ +W + IS
Sbjct: 124 DTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISN 183
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------------- 217
+ +++V+ F + G +P+ T+
Sbjct: 184 SVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQN 243
Query: 218 ----NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
N +I Y + G+ + F RM + V+W+++I+ + Q+ E +A LF
Sbjct: 244 VSVSNGLIDFYGKCGEVECSEMVFDRMGER----NSVSWSSLIAAYVQNNEEEKASCLFL 299
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
I+P + V+ VL A I+ GR + AL + + ++F SAL+DMY KCG
Sbjct: 300 RARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCG 359
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVL 392
S+ +A F +N+ SWNA++G Y G + ++ L E M G+ + V+LI L
Sbjct: 360 SIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICAL 419
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
SACS G ++ G++IF SMKERYGV+ EHYAC+VD+L R+G + AYD ++++P T
Sbjct: 420 SACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPT 479
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
S+ GA C +HG+ +L E+ FE+ + V+LSN+ AA G W E +R
Sbjct: 480 ISIWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNE 539
Query: 513 MKEKNVQKQPGFSRV 527
MKE ++K GFS +
Sbjct: 540 MKEVGIKKGAGFSWI 554
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 279/562 (49%), Gaps = 45/562 (8%)
Query: 1 MNRLIFPINNLSVN-YLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAG 59
M+R P+ N N + L C K LR KQVHA + T+ + F L +
Sbjct: 83 MSRTPNPLTNPPSNPQILSLFNPC---KTLRHLKQVHAQIITHHNSPFQLSALASLSALS 139
Query: 60 CGD--VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
+ A+ +F + NP + N ++ A + + EA+ + M + + + T+
Sbjct: 140 PFPTFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYP 199
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFE-------------------------------N 146
V+KAC G VH + GFE
Sbjct: 200 FVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSAR 259
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
DV NA+ID Y K + AR VF M RDV+SW +MI+GY V K+DEA LF+ M
Sbjct: 260 DVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMP 319
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
E N ++N+++A + + G+ AF FS M D+V+WN+M++ +AQ + N
Sbjct: 320 ----ERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCR----DVVSWNSMLACYAQCGKPN 371
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
EAL LF M G+KP TV +L A G++ G +H + + ++ G+AL+
Sbjct: 372 EALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALV 431
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
DMY+KCG + A +F K+V +WN +I HG V + +LF+ M E G+ N++
Sbjct: 432 DMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDI 491
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T +++LSACSH G+V++G ++ M YG++ EHY CV+D+L R+G + EA +L+
Sbjct: 492 TFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGT 551
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
+PM S GA GC IHG +L +G+ + +++LSNI AA +W +A
Sbjct: 552 MPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDA 611
Query: 507 ENLRKIMKEKNVQKQPGFSRVE 528
+R +MK + K PG S +E
Sbjct: 612 RKVRNLMKVNGISKVPGVSVIE 633
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 172/515 (33%), Positives = 272/515 (52%), Gaps = 49/515 (9%)
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI 118
G GD+ SA VFDK+P N+ M+ A G ++AI F M Y ++FT+S
Sbjct: 195 GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSS 254
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC---GLLCSARRVFHGMF 175
VL AC L + GKQ+H+ ++G DV VG +L+DMY+KC G + +R+VF M
Sbjct: 255 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 314
Query: 176 ERDVVSWTSMISGYCNVSKVD-EAVVLFERMKLEGLEPNQFTY----------------- 217
E +V+SWT++I+ Y + D EA+ LF +M + PN F++
Sbjct: 315 EHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 374
Query: 218 ------------------NAIIASYARRG---DSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
N++I+ YAR G D+ AF F +LV++NA++
Sbjct: 375 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL-------FEKNLVSYNAIV 427
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
G+A++ + EA LF + +GI + T +L G++ G +IH + + G
Sbjct: 428 DGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK 487
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+ +ALI MYS+CG+++ A +F +NV SW +MI + KHG ++E+F +M
Sbjct: 488 SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM 547
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
LE G + NE+T ++VLSACSH G++ +G + F SM + +G+ EHYAC+VD+L RSG
Sbjct: 548 LETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGL 607
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
+VEA + + +P+ + C +HG +L E E P +++LSN+
Sbjct: 608 LVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNL 667
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
A+ G+W + +RK MKE+N+ K+ G S +E N
Sbjct: 668 HASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVEN 702
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 212/436 (48%), Gaps = 58/436 (13%)
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ NPN L ++ G A LM + + T+SI+LK+C+ + + G
Sbjct: 4 LKNPNFEPLKNRLIRQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLG 63
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
K VH Q G E D V N LI +YSKCG +AR +F GM +RD+VSW++M+S + N
Sbjct: 64 KLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFAN 123
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAII-----ASYAR-------------------- 226
S +A+ F M G PN++ + A+I A+YA
Sbjct: 124 NSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVC 183
Query: 227 ------------RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
GD +A+ F +M +LVTW MI+ FAQ +A+ LF
Sbjct: 184 VGCELIDMFVKGSGDLGSAYKVFDKMPER----NLVTWTLMITRFAQLGCARDAIDLFLD 239
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC-- 332
M +SG P+ T + VL A G + +G+++H+ V R+GL +DV G +L+DMY+KC
Sbjct: 240 MELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAA 299
Query: 333 -GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD-SSIELFERMLEEGMRANEVTLIS 390
GS+ D+R +FE NV SW A+I Y + G D +IELF +M+ +R N + S
Sbjct: 300 DGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSS 359
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV----VDMLCRSGRMVE---AYDL 443
VL AC + G +++ Y VK+ CV + M RSGRM + A+D+
Sbjct: 360 VLKACGNLSDPYTGEQVY-----SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDI 414
Query: 444 LRQVPMYVTNSMAGAF 459
L + + N++ +
Sbjct: 415 LFEKNLVSYNAIVDGY 430
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 150/546 (27%), Positives = 267/546 (48%), Gaps = 53/546 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C++ + + GK VH L + L + S+ + L+ +Y+ CGD +ARL+F+ + N
Sbjct: 50 LLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKR 109
Query: 78 VFMLNWMVMASAFTGNFQE--AIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+++W M S F N E AI F M E + N++ F+ V++AC G+ +
Sbjct: 110 D-LVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEII 168
Query: 136 HAVATQMGF-ENDVSVGNALIDMYSK-CGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+ + G+ E DV VG LIDM+ K G L SA +VF M ER++V+WT MI+ + +
Sbjct: 169 YGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLG 228
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM------------- 240
+A+ LF M+L G P++FTY++++++ G SR+
Sbjct: 229 CARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGC 288
Query: 241 ---------TAEGFVPD------------LVTWNAMISGFAQSKR-ENEALKLFKGMLVS 278
A+G V D +++W A+I+ + QS + EA++LF M+
Sbjct: 289 SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG 348
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
I+PN+ + + VL+A G G ++++ ++G+ G++LI MY++ G ++DA
Sbjct: 349 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 408
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
R F+I KN+ S+NA++ Y K+ + + LF + + G+ + T S+LS +
Sbjct: 409 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 468
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSM 455
G + KG +I + + G K ++ ++ M R G + A+ + ++ + SM
Sbjct: 469 GAMGKGEQIHGRLL-KGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSM 527
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAE-NLRKI 512
F HG A+ M + E G KP+ +V + + C+ G E + + +
Sbjct: 528 ITGFAK----HGFATRALEMFHKMLETG-TKPNEITYVAVLSACSHVGMISEGQKHFNSM 582
Query: 513 MKEKNV 518
KE +
Sbjct: 583 YKEHGI 588
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 217/451 (48%), Gaps = 65/451 (14%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGC---GDVNSARLVFDKIP 74
+L C + L GKQ+H+ + L + + LV +YA C G V+ +R VF+++P
Sbjct: 255 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 314
Query: 75 NPNVFMLNWMVMASAFTGNFQ---EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
NV ++W + +A+ + + EAI F M R N F+FS VLKAC L D
Sbjct: 315 EHNV--MSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 372
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G+QV++ A ++G + VGN+LI MY++ G + AR+ F +FE+++VS+ +++ GY
Sbjct: 373 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 432
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY---------------------------------- 217
K +EA +LF + G+ + FT+
Sbjct: 433 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI 492
Query: 218 -NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
NA+I+ Y+R G+ AAF F+ M ++++W +MI+GFA+ AL++F ML
Sbjct: 493 CNALISMYSRCGNIEAAFQVFNEMEDR----NVISWTSMITGFAKHGFATRALEMFHKML 548
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREI-------HALVCRMGLHIDVFTGSALIDMY 329
+G KPN +T VL A G I G++ H +V RM + + ++D+
Sbjct: 549 ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHY------ACMVDLL 602
Query: 330 SKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVT 387
+ G L +A + + + W ++G HG + E +LE E
Sbjct: 603 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYI 662
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
L+S L A + G + ++I +SMKER +K
Sbjct: 663 LLSNLHASA--GQWKDVVKIRKSMKERNLIK 691
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 182/555 (32%), Positives = 280/555 (50%), Gaps = 42/555 (7%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARL 68
LS N L ++ + ++ G+ HA + F L + LV +YA +NSA+L
Sbjct: 4 LSQNSLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKL 63
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
+ + P +V ++ S G F A+ +FS M R N FTF VLKA GL
Sbjct: 64 ILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRM 123
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
GKQ+HA+A + G NDV VG ++ DMYSK G L A +VF M R++ +W + IS
Sbjct: 124 DTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISN 183
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------------- 217
+ +++V+ F + G +P+ T+
Sbjct: 184 SVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQN 243
Query: 218 ----NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
N +I Y + G+ + F RM + V+W+++I+ + Q+ E +A LF
Sbjct: 244 VSVSNGLIDFYGKCGEVECSEMVFDRMGER----NSVSWSSLIAAYVQNNEEEKASCLFL 299
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
I+P + V+ VL A I+ GR + AL + + ++F SAL+DMY KCG
Sbjct: 300 RARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCG 359
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVL 392
S+ +A F +N+ SWNA++G Y G + ++ L E M G+ + V+LI L
Sbjct: 360 SIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICAL 419
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
SACS G ++ G++IF SMKERYGV+ EHYAC+VD+L R+G + AYD ++++P T
Sbjct: 420 SACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPT 479
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
S+ GA C +HG+ +L E+ FE+ + V+LSN+ AA G W E +R
Sbjct: 480 ISIWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNE 539
Query: 513 MKEKNVQKQPGFSRV 527
MKE ++K GFS +
Sbjct: 540 MKEVGIKKGAGFSWI 554
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/550 (31%), Positives = 281/550 (51%), Gaps = 37/550 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L L C++S G ++H + + F + S LV +YA GD+ AR VF++IP
Sbjct: 136 LSLALKACIRSADYGYGTRLHCDAVKVGGADGFVMNS-LVDMYAKAGDLECARKVFERIP 194
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGY--FSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
NV ++W M S N A G F+ MR+ +++T + V+ AC L+ + +G
Sbjct: 195 GRNV--VSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQG 252
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+ +H + G ++ + AL+DMY KCG L A+ VF + D+V WT+MI GY
Sbjct: 253 RWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQN 312
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV------ 246
+A+ LF K + PN T ++++ A+ D + + G V
Sbjct: 313 GNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVV 372
Query: 247 -------------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
D+V WN+M+SG+A++ N+AL LFK M + G
Sbjct: 373 NALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPS 432
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ ++V L A G + IG+ H + +++ +AL+++Y+KCG L AR +
Sbjct: 433 PDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRV 492
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ +N +W AMIG YG G SI+LF ML++G+ N+V S+LS CSH G+V
Sbjct: 493 FDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMV 552
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
F SM + + + S +HYAC+VD+L R+G + EA + + +PM S+ GAF +
Sbjct: 553 TAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLH 612
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
GC +H R + + +PD +V++SN+ ++G W +++ +R+ M+EK + K
Sbjct: 613 GCELHSRLQFGEEAIKRMMVLHPERPDLYVLISNLYTSNGMWEKSQAIRRWMQEKGLVKL 672
Query: 522 PGFSRVEKRN 531
PG+S + + N
Sbjct: 673 PGYSSIGREN 682
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 205/427 (48%), Gaps = 52/427 (12%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTND----LNIFSLKSKLVGVYAGCGDVNSA 66
LS L LL C +LR +HA L T+ L ++KL+ YA GD+ SA
Sbjct: 27 LSAGDLLRLLPSCGTLPSLRV---LHARLLTHTQGLLLGSLRARTKLLSCYAALGDLASA 83
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC----NKFTFSIVLKA 122
R+VFD P P+ + M+ EA+ MR C + F S+ LKA
Sbjct: 84 RMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRR-RPCPEAQDDFVLSLALKA 142
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C+ D G ++H A ++G D V N+L+DMY+K G L AR+VF + R+VVSW
Sbjct: 143 CIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSW 201
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------- 223
TSM+SG + ++LF +M+ + + P+++T +I +
Sbjct: 202 TSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIK 261
Query: 224 ----------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
Y + G+ A F ++ DLV W MI G+ Q+ +
Sbjct: 262 QGLMSNSFISAALLDMYVKCGELEDAQCVFDELS----YIDLVLWTTMIVGYTQNGNPLD 317
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
AL+LF + I PN+VT+ VL A + +GR IH + ++GL +AL+D
Sbjct: 318 ALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVD 377
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MY+KC ++ +A +F K+V +WN+M+ Y ++ M + ++ LF++M +G + ++
Sbjct: 378 MYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAIS 437
Query: 388 LISVLSA 394
++ LSA
Sbjct: 438 VVHALSA 444
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 281/552 (50%), Gaps = 41/552 (7%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L S +R+ K+VH + + ++ + L+ Y CG+V SAR++FD++ +
Sbjct: 163 CVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDR 222
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V N M+ G + + +F M + T VL AC + ++ G+ +H
Sbjct: 223 DVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALH 282
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + GF V N L+DMYSKCG L A VF M E +VSWTS+I+ +
Sbjct: 283 AYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHY 342
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
EA+ LF+ M+ +GL P+ + NA++
Sbjct: 343 EAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALM 402
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ G A FS++ V ++V+WN MI G++Q+ NEAL+LF M +K
Sbjct: 403 NMYAKCGSMEEANLIFSQLP----VKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLK 457
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P++VT+ VL A +++ GREIH + R G D+ AL+DMY KCG L A+ L
Sbjct: 458 PDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQL 517
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F++ K++ W MI YG HG +I FE+M G+ E + S+L AC+H GL+
Sbjct: 518 FDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLL 577
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
++G ++F SMK ++ EHYAC+VD+L RSG + AY + +P+ ++ GA +
Sbjct: 578 KEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLS 637
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
GC IH +LA + E FE+ +V+L+N+ A +W E + +++ + + ++
Sbjct: 638 GCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKND 697
Query: 522 PGFSRVEKRNEF 533
G S +E + +F
Sbjct: 698 QGCSWIEVQGKF 709
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/554 (29%), Positives = 275/554 (49%), Gaps = 55/554 (9%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLV 69
L +N +L C + K+L GK+VH+++ +N + I L +KLV +Y CGD+ R +
Sbjct: 55 LELNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRI 114
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
FD I N +F+ N ++ A GN++E++G F M+E R + +TF+ VLK +
Sbjct: 115 FDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKV 174
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
++ K+VH ++GF + +V N+LI Y KCG + SAR +F + +RDVVSW SMISG
Sbjct: 175 RECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGC 234
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------------- 217
+ F +M G++ + T
Sbjct: 235 TMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGV 294
Query: 218 ---NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
N ++ Y++ G+ N A F +M +V+W ++I+ + EA+ LF
Sbjct: 295 MFNNTLLDMYSKCGNLNGANEVFVKMGE----TTIVSWTSIIAAHVREGLHYEAIGLFDE 350
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M G++P+ VT V+ A + S+ GRE+H + + + ++ +AL++MY+KCGS
Sbjct: 351 MQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGS 410
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
+++A +F +KN+ SWN MIG Y ++ + + +++LF M ++ ++ ++VT+ VL A
Sbjct: 411 MEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPA 469
Query: 395 CSHGGLVEKGLEIF-RSMKERYGVKISKEHYAC-VVDMLCRSGRMVEAYDLLRQVP---M 449
C+ +EKG EI +++ Y S H AC +VDM + G +V A L +P M
Sbjct: 470 CAGLAALEKGREIHGHILRKGY---FSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDM 526
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAEN 508
+ M + +HG A++ E+ G+ + F + C G E
Sbjct: 527 ILWTVMIAGY----GMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWK 582
Query: 509 LRKIMK-EKNVQKQ 521
L MK E N++ +
Sbjct: 583 LFDSMKSECNIEPK 596
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/498 (32%), Positives = 269/498 (54%), Gaps = 52/498 (10%)
Query: 39 LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAI 98
LC +D + F + L+G G +F +I NPN+F+ N ++ + +A
Sbjct: 55 LCVDD-STFHKPTNLLGYAYG---------IFSQIQNPNLFVFNVLIRCFSTGAEPSKAF 104
Query: 99 GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMY 158
G+++ M + + TF ++KA + + G+Q H+ + GF+NDV V N+L+ MY
Sbjct: 105 GFYTQMLKSRIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMY 164
Query: 159 SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYN 218
+ CGL+ +A R+F M RDVVSWTSM++GYC V++A +F+ M P++
Sbjct: 165 ANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEM------PHR---- 214
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+L TW+ MI+G+A++ +A+ LF+ M
Sbjct: 215 -----------------------------NLFTWSIMINGYAKNNCFEKAIDLFELMKRE 245
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G+ N + V+ + G+++ G H V + + +++ G+AL+DMY +CG ++ A
Sbjct: 246 GVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKA 305
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+FE K+ SW+++I HG +I F +M+ G ++TL +VLSACSHG
Sbjct: 306 IRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHG 365
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLV+KGLEI+ +MK YG++ EHY C+VDML R+G++ EA + + ++P+ + GA
Sbjct: 366 GLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGA 425
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C I+ ++A +G E+ +V+LSNI A G+W + E+LR IMKEK V
Sbjct: 426 LLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLV 485
Query: 519 QKQPGFSRVE---KRNEF 533
+K PG+S +E K N+F
Sbjct: 486 KKPPGWSLIEIDGKINKF 503
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 7/209 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C AL G++ H + + + + L + LV +Y CG++ A VF+++P+ +
Sbjct: 257 VISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKD 316
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV--GLLDIKKGKQV 135
+ ++ A G+ +AI YFS M + T + VL AC GL+D KG ++
Sbjct: 317 SLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVD--KGLEI 374
Query: 136 HA-VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+ + G E + ++DM + G L A M + + G C + K
Sbjct: 375 YENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYK 434
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
E M +E ++P Y ++++
Sbjct: 435 NTEVAERVGNMLIE-VKPEHSGYYVLLSN 462
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/515 (33%), Positives = 272/515 (52%), Gaps = 49/515 (9%)
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI 118
G GD+ SA VFDK+P N+ M+ A G ++AI F M Y ++FT+S
Sbjct: 177 GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSS 236
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC---GLLCSARRVFHGMF 175
VL AC L + GKQ+H+ ++G DV VG +L+DMY+KC G + +R+VF M
Sbjct: 237 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 296
Query: 176 ERDVVSWTSMISGYCNVSKVD-EAVVLFERMKLEGLEPNQFTY----------------- 217
E +V+SWT++I+ Y + D EA+ LF +M + PN F++
Sbjct: 297 EHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 356
Query: 218 ------------------NAIIASYARRG---DSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
N++I+ YAR G D+ AF F +LV++NA++
Sbjct: 357 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL-------FEKNLVSYNAIV 409
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
G+A++ + EA LF + +GI + T +L G++ G +IH + + G
Sbjct: 410 DGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK 469
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+ +ALI MYS+CG+++ A +F +NV SW +MI + KHG ++E+F +M
Sbjct: 470 SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM 529
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
LE G + NE+T ++VLSACSH G++ +G + F SM + +G+ EHYAC+VD+L RSG
Sbjct: 530 LETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGL 589
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
+VEA + + +P+ + C +HG +L E E P +++LSN+
Sbjct: 590 LVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNL 649
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
A+ G+W + +RK MKE+N+ K+ G S +E N
Sbjct: 650 HASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVEN 684
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 205/417 (49%), Gaps = 58/417 (13%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G A LM + + T+SI+LK+C+ + + GK VH Q G E D V
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 152 NALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
N LI +YSKCG +AR +F GM +RD+VSW++M+S + N S +A+ F M G
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124
Query: 211 EPNQFTYNAII-----ASYAR--------------------------------RGDSNAA 233
PN++ + A+I A+YA GD +A
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
+ F +M +LVTW MI+ FAQ +A+ LF M +SG P+ T + VL A
Sbjct: 185 YKVFDKMPER----NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 240
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC---GSLKDARTLFEITRIKNV 350
G + +G+++H+ V R+GL +DV G +L+DMY+KC GS+ D+R +FE NV
Sbjct: 241 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 300
Query: 351 ASWNAMIGCYGKHGMVD-SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
SW A+I Y + G D +IELF +M+ +R N + SVL AC + G +++
Sbjct: 301 MSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY- 359
Query: 410 SMKERYGVKISKEHYACV----VDMLCRSGRMVE---AYDLLRQVPMYVTNSMAGAF 459
Y VK+ CV + M RSGRM + A+D+L + + N++ +
Sbjct: 360 ----SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 412
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 150/546 (27%), Positives = 267/546 (48%), Gaps = 53/546 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C++ + + GK VH L + L + S+ + L+ +Y+ CGD +ARL+F+ + N
Sbjct: 32 LLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKR 91
Query: 78 VFMLNWMVMASAFTGNFQE--AIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+++W M S F N E AI F M E + N++ F+ V++AC G+ +
Sbjct: 92 D-LVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEII 150
Query: 136 HAVATQMGF-ENDVSVGNALIDMYSK-CGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+ + G+ E DV VG LIDM+ K G L SA +VF M ER++V+WT MI+ + +
Sbjct: 151 YGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLG 210
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM------------- 240
+A+ LF M+L G P++FTY++++++ G SR+
Sbjct: 211 CARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGC 270
Query: 241 ---------TAEGFVPD------------LVTWNAMISGFAQSKR-ENEALKLFKGMLVS 278
A+G V D +++W A+I+ + QS + EA++LF M+
Sbjct: 271 SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG 330
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
I+PN+ + + VL+A G G ++++ ++G+ G++LI MY++ G ++DA
Sbjct: 331 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 390
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
R F+I KN+ S+NA++ Y K+ + + LF + + G+ + T S+LS +
Sbjct: 391 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 450
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSM 455
G + KG +I + + G K ++ ++ M R G + A+ + ++ + SM
Sbjct: 451 GAMGKGEQIHGRLL-KGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSM 509
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAE-NLRKI 512
F HG A+ M + E G KP+ +V + + C+ G E + + +
Sbjct: 510 ITGFAK----HGFATRALEMFHKMLETG-TKPNEITYVAVLSACSHVGMISEGQKHFNSM 564
Query: 513 MKEKNV 518
KE +
Sbjct: 565 YKEHGI 570
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 217/451 (48%), Gaps = 65/451 (14%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGC---GDVNSARLVFDKIP 74
+L C + L GKQ+H+ + L + + LV +YA C G V+ +R VF+++P
Sbjct: 237 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 296
Query: 75 NPNVFMLNWMVMASAFTGNFQ---EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
NV ++W + +A+ + + EAI F M R N F+FS VLKAC L D
Sbjct: 297 EHNV--MSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 354
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G+QV++ A ++G + VGN+LI MY++ G + AR+ F +FE+++VS+ +++ GY
Sbjct: 355 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 414
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY---------------------------------- 217
K +EA +LF + G+ + FT+
Sbjct: 415 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI 474
Query: 218 -NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
NA+I+ Y+R G+ AAF F+ M ++++W +MI+GFA+ AL++F ML
Sbjct: 475 CNALISMYSRCGNIEAAFQVFNEMEDR----NVISWTSMITGFAKHGFATRALEMFHKML 530
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREI-------HALVCRMGLHIDVFTGSALIDMY 329
+G KPN +T VL A G I G++ H +V RM + + ++D+
Sbjct: 531 ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHY------ACMVDLL 584
Query: 330 SKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVT 387
+ G L +A + + + W ++G HG + E +LE E
Sbjct: 585 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYI 644
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
L+S L A + G + ++I +SMKER +K
Sbjct: 645 LLSNLHASA--GQWKDVVKIRKSMKERNLIK 673
>gi|297833228|ref|XP_002884496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330336|gb|EFH60755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 294/545 (53%), Gaps = 43/545 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGD---VNSARLVFDKI 73
+L + +++ + Q+H L+ + + N+ L S+L+ C + ++ AR VF+ I
Sbjct: 8 ILSQLENCRSMVELNQLHGLMIKSSVIRNVIPL-SRLIDFCTTCPETMNLSYARSVFESI 66
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P+V++ N M+ + + N +A+ ++ M Y + FTF VLKAC GL DI+ G
Sbjct: 67 DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGS 126
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH + GFE ++ V L+ MY CG + RVF + + +VV+W S+ISG+ N +
Sbjct: 127 CVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNWGLRVFEDIPKLNVVAWGSLISGFVNNN 186
Query: 194 KVDEAVVLFERMKLEGLEPNQ---------------------FTYNAIIAS-----YARR 227
+ +A+ F M+ G++PN+ F +N I+A+ YA+
Sbjct: 187 RFSDAIEAFREMQSIGVKPNETIMVDLLVACGRCFDPYCQSKFEFNVILATSLIDMYAKC 246
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
GD A F M +LV+WN++I+G++Q+ EA+ +F ML GI P+ VT
Sbjct: 247 GDMRTARYLFDGMPER----NLVSWNSIITGYSQNGDAEEAMCMFSDMLDLGIAPDKVTF 302
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
V++A + G Q+G+ IHA V + G D AL++MY+K G+ + A+ +FE
Sbjct: 303 FSVIRASMIQGCSQLGQTIHAYVSKTGFVKDAAIVCALVNMYAKTGNAESAKKMFEDLEK 362
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKGLE 406
K+ +W +I HG + ++ +F+RM EEG + +T + VL ACSH GLVE+G
Sbjct: 363 KDTIAWTVVIIGLASHGHGNKALSIFQRMQEEGNATPDGITYLGVLYACSHIGLVEEGQR 422
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F M++ YG++ + EHY C+VD+L R+GR EA L++ +P+ T ++ GA NGC IH
Sbjct: 423 YFAEMRDLYGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVQPTANIWGALLNGCEIH 482
Query: 467 GRRDLA---VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
DLA +M E E+G +V+LSNI A G W + + +R+ MK K V K
Sbjct: 483 ENLDLADRIRSMVSESEELG---SGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKLLA 539
Query: 524 FSRVE 528
S VE
Sbjct: 540 HSSVE 544
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 291/556 (52%), Gaps = 49/556 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L + + L G+Q+HAL+ + + + + L+ +Y+ G V +A F I +P
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF--INSPE 957
Query: 78 VFMLNWMVMASAFTGNF--QEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLD---IKK 131
+ +++W M S++ N EAI F L+R+ + + ++FT + VL+AC +
Sbjct: 958 LDLISWNTMISSYAQNNLEMEAICTFRDLLRDGL-KPDQFTLASVLRACSTGDEGEYFTL 1016
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G QVH A + G ND V ALID+YSK G + A + HG ++ D+ SW +++ GY
Sbjct: 1017 GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIK 1076
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY-NAIIAS--------------------------- 223
+K +A+ F M G+ ++ T AI AS
Sbjct: 1077 SNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWV 1136
Query: 224 -------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
Y + GD A F ++ PD V W MISG+ ++ E+ AL ++ M
Sbjct: 1137 SSGVLDMYIKCGDMPNALELFGEISR----PDEVAWTTMISGYIENGDEDHALSVYHLMR 1192
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
VSG++P+ T +++A +++ G++IHA V ++ +D F G++L+DMY KCGS++
Sbjct: 1193 VSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQ 1252
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
DA +F ++ V WNAM+ +HG VD ++ LF M G++ ++VT I VLSACS
Sbjct: 1253 DAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACS 1312
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
H GL + + F +M + YG+ EHY+C+VD L R+GR+ EA +++ +P + SM
Sbjct: 1313 HSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMY 1372
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
A C G + A + ++ + +V+LSNI AA +W + + R +MK K
Sbjct: 1373 RALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLK 1432
Query: 517 NVQKQPGFSRVEKRNE 532
NV+K PGFS ++ +N+
Sbjct: 1433 NVKKDPGFSWIDVKNK 1448
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 227/470 (48%), Gaps = 47/470 (10%)
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N+F N + G AI F + + T I+L A VG D+ G+Q+H
Sbjct: 858 NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A+ + F V V N+L++MYSK G++ +A + F E D++SW +MIS Y +
Sbjct: 918 ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEM 977
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA---------EGFVP 247
EA+ F + +GL+P+QFT +++ + GD F S++ + FV
Sbjct: 978 EAICTFRDLLRDGLKPDQFTLASVLRA-CSTGDEGEYFTLGSQVHVYAIKCGIINDSFVS 1036
Query: 248 --------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
DL +WNA++ G+ +S + +AL+ F M GI
Sbjct: 1037 TALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIP 1096
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+ +T+ ++A G +++ G++I A ++G + D++ S ++DMY KCG + +A L
Sbjct: 1097 IDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALEL 1156
Query: 342 F-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
F EI+R VA W MI Y ++G D ++ ++ M G++ +E T +++ A S
Sbjct: 1157 FGEISRPDEVA-WTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTA 1215
Query: 401 VEKGLEIFRSMKERYGVKISKEHY--ACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
+E+G +I ++ + + S +H+ +VDM C+ G + +AY + R++ + A
Sbjct: 1216 LEQGKQIHANVVK---LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKV-VFWNA 1271
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEA 506
G HG D A+ + G+ +PD F+ + + C+ G + EA
Sbjct: 1272 MLLGLAQHGHVDEALNLFRTMQSNGI-QPDKVTFIGVLSACSHSGLFSEA 1320
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 130/433 (30%), Positives = 212/433 (48%), Gaps = 18/433 (4%)
Query: 29 LRQGKQVHALLCTN-DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+ GK+ HA + T+ DL L + L+ +Y+ CG + SAR VFDK + ++ N ++ A
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 88 SAFTG-----NFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
A N E F L+REF + + T + +LK C+ ++ + VH A ++
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
GFE D+ V AL+++Y K GL+ AR +F M ERD V W M+ Y S DEA+ F
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806
Query: 203 ERMKLEGLEPNQFTYNAIIA------SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
G P+ + +I S R+ + A+ +M ++ WN +
Sbjct: 807 SAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKL 866
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+ F + + A+ FK +L S I ++VT+ +L A + +G +IHALV +
Sbjct: 867 TEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFA 926
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
V ++L++MYSK G + A F + ++ SWN MI Y ++ + +I F +
Sbjct: 927 PVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDL 986
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK--ISKEHY--ACVVDMLC 432
L +G++ ++ TL SVL ACS G E S Y +K I + + ++D+
Sbjct: 987 LRDGLKPDQFTLASVLRACSTGD--EGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYS 1044
Query: 433 RSGRMVEAYDLLR 445
+ G+M EA LL
Sbjct: 1045 KGGKMDEAEFLLH 1057
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 291/556 (52%), Gaps = 49/556 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L + + L G+Q+HAL+ + + + + L+ +Y+ G V +A F I +P
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF--INSPE 957
Query: 78 VFMLNWMVMASAFTGNF--QEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLD---IKK 131
+ +++W M S++ N EAI F L+R+ + + ++FT + VL+AC +
Sbjct: 958 LDLISWNTMISSYAQNNLEMEAICTFRDLLRDGL-KPDQFTLASVLRACSTGDEGEYFTL 1016
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G QVH A + G ND V ALID+YSK G + A + HG ++ D+ SW +++ GY
Sbjct: 1017 GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIK 1076
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY-NAIIAS--------------------------- 223
+K +A+ F M G+ ++ T AI AS
Sbjct: 1077 SNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWV 1136
Query: 224 -------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
Y + GD A F ++ PD V W MISG+ ++ E+ AL ++ M
Sbjct: 1137 SSGVLDMYIKCGDMPNALELFGEISR----PDEVAWTTMISGYIENGDEDHALSVYHLMR 1192
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
VSG++P+ T +++A +++ G++IHA V ++ +D F G++L+DMY KCGS++
Sbjct: 1193 VSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQ 1252
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
DA +F ++ V WNAM+ +HG VD ++ LF M G++ ++VT I VLSACS
Sbjct: 1253 DAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACS 1312
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
H GL + + F +M + YG+ EHY+C+VD L R+GR+ EA +++ +P + SM
Sbjct: 1313 HSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMY 1372
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
A C G + A + ++ + +V+LSNI AA +W + + R +MK K
Sbjct: 1373 RALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLK 1432
Query: 517 NVQKQPGFSRVEKRNE 532
NV+K PGFS ++ +N+
Sbjct: 1433 NVKKDPGFSWIDVKNK 1448
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 227/470 (48%), Gaps = 47/470 (10%)
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N+F N + G AI F + + T I+L A VG D+ G+Q+H
Sbjct: 858 NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A+ + F V V N+L++MYSK G++ +A + F E D++SW +MIS Y +
Sbjct: 918 ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEM 977
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA---------EGFVP 247
EA+ F + +GL+P+QFT +++ + GD F S++ + FV
Sbjct: 978 EAICTFRDLLRDGLKPDQFTLASVLRA-CSTGDEGEYFTLGSQVHVYAIKCGIINDSFVS 1036
Query: 248 --------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
DL +WNA++ G+ +S + +AL+ F M GI
Sbjct: 1037 TALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIP 1096
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+ +T+ ++A G +++ G++I A ++G + D++ S ++DMY KCG + +A L
Sbjct: 1097 IDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALEL 1156
Query: 342 F-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
F EI+R VA W MI Y ++G D ++ ++ M G++ +E T +++ A S
Sbjct: 1157 FGEISRPDEVA-WTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTA 1215
Query: 401 VEKGLEIFRSMKERYGVKISKEHY--ACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
+E+G +I ++ + + S +H+ +VDM C+ G + +AY + R++ + A
Sbjct: 1216 LEQGKQIHANVVK---LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKV-VFWNA 1271
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEA 506
G HG D A+ + G+ +PD F+ + + C+ G + EA
Sbjct: 1272 MLLGLAQHGHVDEALNLFRTMQSNGI-QPDKVTFIGVLSACSHSGLFSEA 1320
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/433 (30%), Positives = 212/433 (48%), Gaps = 18/433 (4%)
Query: 29 LRQGKQVHALLCTN-DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+ GK+ HA + T+ DL L + L+ +Y+ CG + SAR VFDK + ++ N ++ A
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 88 SAFTG-----NFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
A N E F L+REF + + T + +LK C+ ++ + VH A ++
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
GFE D+ V AL+++Y K GL+ AR +F M ERD V W M+ Y S DEA+ F
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806
Query: 203 ERMKLEGLEPNQFTYNAIIA------SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
G P+ + +I S R+ + A+ +M ++ WN +
Sbjct: 807 SAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKL 866
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+ F + + A+ FK +L S I ++VT+ +L A + +G +IHALV +
Sbjct: 867 TEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFA 926
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
V ++L++MYSK G + A F + ++ SWN MI Y ++ + +I F +
Sbjct: 927 PVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDL 986
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK--ISKEHY--ACVVDMLC 432
L +G++ ++ TL SVL ACS G E S Y +K I + + ++D+
Sbjct: 987 LRDGLKPDQFTLASVLRACSTGD--EGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYS 1044
Query: 433 RSGRMVEAYDLLR 445
+ G+M EA LL
Sbjct: 1045 KGGKMDEAEFLLH 1057
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 267/514 (51%), Gaps = 41/514 (7%)
Query: 56 VYAGCGDVNSARLVF-DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKF 114
+Y+ C +N A +F D NVF N ++ G +E ++ MR +KF
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
TF +KAC+ +L+IKK +H + + G E DV +G+AL++ Y K GL+ A+ F +
Sbjct: 61 TFPCAIKACLDVLEIKK---IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 117
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA- 233
RDVV W +M++GY + + + + F RM E + P++FT I++ +A GD N
Sbjct: 118 PIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGR 177
Query: 234 --FAFFSRMTAEGFVP----------------------------DLVTWNAMISGFAQSK 263
F +M + V D+ +WN++ S Q
Sbjct: 178 IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCG 237
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID----- 318
+ L+L ML +GI+P+ VTVT VL A ++ GREIH + GL D
Sbjct: 238 DHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID 297
Query: 319 -VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
V +A+IDMY+KCGS++DA +FE K+VASWN MI YG HG + ++E+F RM
Sbjct: 298 DVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMC 357
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
E ++ +EVT + VLSACSH G V +G MK +Y V + EHY CV+DML R+G++
Sbjct: 358 EVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQL 417
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
EAY+L +P+ + A C +H LA + FE+ +V++SN+
Sbjct: 418 DEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVY 477
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
A G + E +R M+++NV+K PG S +E +N
Sbjct: 478 GAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKN 511
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 201/446 (45%), Gaps = 62/446 (13%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C + C+ + + K++H LL +L++F + S LV Y G + A++ F+++P
Sbjct: 64 CAIKACLD---VLEIKKIHGLLFKFGLELDVF-IGSALVNCYLKFGLMEHAQVAFEELPI 119
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V + N MV A G F+ + F M + ++FT + +L + D+ G+ +
Sbjct: 120 RDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRII 179
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H A +MG+++ V+V N+LIDMY KC + A +F M E+D+ SW S+ S +
Sbjct: 180 HGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDH 239
Query: 196 DEAVVLFERMKLEGLEPNQFTY-------------------------------------- 217
D + L +RM G++P+ T
Sbjct: 240 DGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDV 299
Query: 218 ---NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
NA+I YA+ G A F RM + D+ +WN MI G+ NEAL++F
Sbjct: 300 LLKNAVIDMYAKCGSMRDAHLVFERMXNK----DVASWNIMIMGYGMHGYGNEALEMFSR 355
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA-LVCRMGLHIDVFTGSALIDMYSKCG 333
M +KP+ VT GVL A G + GR A + + + + + +IDM + G
Sbjct: 356 MCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAG 415
Query: 334 SLKDARTLFEITRIK-NVASWNAMIGC--YGKHGMVD--SSIELFERMLEEGMRANEVTL 388
L +A L I+ N W A++ KH ++ ++ +FE LE + V +
Sbjct: 416 QLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFE--LEPEHCGSYVLM 473
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKER 414
+V A G E+ LE+ +M+++
Sbjct: 474 SNVYGAV---GRYEEVLEVRHTMRQQ 496
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 190/553 (34%), Positives = 283/553 (51%), Gaps = 43/553 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C L G+ VHA L ++ +L + L +YA C AR VFD++P +
Sbjct: 65 LLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRD 124
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N +V A G + A+ M+E R + T VL AC + ++ H
Sbjct: 125 RVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAH 184
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A A + G E V+V A++D Y KCG + +AR VF M ++ VSW +MI GY
Sbjct: 185 AFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSR 244
Query: 197 EAVVLFERMKLEG-----------------------------------LEPNQFTYNAII 221
EA+ LF RM EG L+ N NA+I
Sbjct: 245 EALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALI 304
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y++ + A F + V+WNAMI G AQ+ +A++LF M + +K
Sbjct: 305 TMYSKCKRVDLASHVFDELDRR----TQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360
Query: 282 PNNVTVTGVLQA-GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P++ T+ V+ A ++ +Q R IH R+ L DV+ +ALIDMY+KCG + AR
Sbjct: 361 PDSFTLVSVIPALADISDPLQ-ARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARI 419
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
LF R ++V +WNAMI YG HG +++ELFE M G+ NE T +SVLSACSH GL
Sbjct: 420 LFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGL 479
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V++G E F SMKE YG++ EHY +VD+L R+G++ EA+ ++++PM S+ GA
Sbjct: 480 VDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAML 539
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
C +H +LA ++ FE+G ++ V+L+NI A W + +R M++ +QK
Sbjct: 540 GACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQK 599
Query: 521 QPGFSRVEKRNEF 533
PG+S ++ +NE
Sbjct: 600 TPGWSIIQLKNEI 612
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 140/488 (28%), Positives = 218/488 (44%), Gaps = 70/488 (14%)
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
ASA + A+ F M TF+ +LK C D+ G+ VHA G ++
Sbjct: 33 ASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDS 92
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
+ AL +MY+KC ARRVF M RD V+W ++++GY A+ + RM+
Sbjct: 93 EALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQ 152
Query: 207 -LEGLEPNQFTY-----------------------------------NAIIASYARRGDS 230
EG P+ T AI+ +Y + GD
Sbjct: 153 EEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDI 212
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
AA F M + + V+WNAMI G+AQ+ EAL LF M+ G+ +V+V
Sbjct: 213 RAARVVFDWMPTK----NSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAA 268
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
LQA G G + G +H L+ R+GL +V +ALI MYSKC + A +F+ +
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ 328
Query: 351 ASWNAMI-GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
SWNAMI GC ++G + ++ LF RM E ++ + TL+SV+ A + +I
Sbjct: 329 VSWNAMILGC-AQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALA---------DISD 378
Query: 410 SMKER----YGVKISKEH----YACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGA 458
++ R Y +++ + ++DM + GR+ A ++ R+ + N+M
Sbjct: 379 PLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMI-- 436
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICAADGEWHEAENLRKIMKEK 516
+G HG AV + EE +G+ P+ LS + C+ G E MKE
Sbjct: 437 --HGYGSHGFGKAAVELFEEMKSIGI-VPNETTFLSVLSACSHAGLVDEGREYFTSMKE- 492
Query: 517 NVQKQPGF 524
+ +PG
Sbjct: 493 DYGLEPGM 500
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 257/479 (53%), Gaps = 34/479 (7%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEA-IGYFSLMREFIYRCNKFTFSIV 119
D+ AR +FD + +PNVF+ M+ A A + + A + Y +++R R N F + V
Sbjct: 90 ADLCYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHV 149
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSK-CGLLCSARRVFHGMFERD 178
L++C +L K VH + GF V A++D YS+ + SAR++F M ER
Sbjct: 150 LRSCPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERT 209
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
VVSWT+MISGY + D A+ LFE M E + +NA+IA A+ G A F
Sbjct: 210 VVSWTAMISGYARLGNFDSAIELFESMP----ERDVPAWNALIAGCAQNGFFCEAIWLFK 265
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
RM + + REN KPN T+ L A G TG
Sbjct: 266 RMVLLALEGN------------NNDREN--------------KPNKTTLGSALSACGHTG 299
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
+ +G+ IH V + D F +AL+DMY KCG+LK AR +F++ +KN+ SWN++I
Sbjct: 300 MLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKNLTSWNSLIN 359
Query: 359 CYGKHGMVDSSIELFERMLE--EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
C HG S+I+LF ++ +G++ NEVT + VL+AC+HGGLVEKG F M+ Y
Sbjct: 360 CLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYD 419
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
++ EH+ C++D+L R+GR EA +++R + + + G+ N C IHGR DLA
Sbjct: 420 IEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSV 479
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
++ EM + +ML+NI A G+W E +R+++KEKN K PG S +E N+ +
Sbjct: 480 KKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEVDNQVYQ 538
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 146/318 (45%), Gaps = 30/318 (9%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM------ 104
+ ++ YA G+ +SA +F+ +P +V N ++ A G F EAI F M
Sbjct: 214 TAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALE 273
Query: 105 -----REFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDM 157
RE + NK T L AC G+L + GK +H + D + NAL+DM
Sbjct: 274 GNNNDRE--NKPNKTTLGSALSACGHTGMLHL--GKWIHGYVFKTYPGQDSFISNALLDM 329
Query: 158 YSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL--EGLEPNQF 215
Y KCG L ARRVF + +++ SW S+I+ A+ LF + +G++PN+
Sbjct: 330 YGKCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEV 389
Query: 216 TYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKG 274
T+ ++ + G +++F M + + P + + +I ++ R EA+++ +G
Sbjct: 390 TFVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRG 449
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS---ALIDMYSK 331
M I+P+ V +L A + G ++ + + +D G L ++Y++
Sbjct: 450 M---NIEPDEVVWGSLLNACKIHGR----SDLAEYSVKKLIEMDPKNGGYRIMLANIYAE 502
Query: 332 CGSLKDARTLFEITRIKN 349
G + R + + + KN
Sbjct: 503 FGKWDEVRKVRRLLKEKN 520
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 94/222 (42%), Gaps = 14/222 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK-LVGVYAGCGDVNSARLVFDKIP 74
L L C + L GK +H + S S L+ +Y CG++ AR VFD I
Sbjct: 288 LGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMIT 347
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIY-----RCNKFTFSIVLKACVGLLDI 129
N+ N ++ A G+ AI F+ E I+ + N+ TF VL AC +
Sbjct: 348 LKNLTSWNSLINCLALHGHSGSAIDLFA---ELIHCGDGVKPNEVTFVGVLNACTHGGLV 404
Query: 130 KKGKQVHAVATQ-MGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMIS 187
+KG + + E + LID+ + G A V GM E D V W S+++
Sbjct: 405 EKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLN 464
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-YARRG 228
C + + + + KL ++P Y ++A+ YA G
Sbjct: 465 A-CKIHGRSD-LAEYSVKKLIEMDPKNGGYRIMLANIYAEFG 504
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 175/551 (31%), Positives = 287/551 (52%), Gaps = 44/551 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C + AL +G+Q+H+ + ++ ++ L+ +Y C D+ +A +F N
Sbjct: 320 LLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTEN 379
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQV 135
V + N M++A N E+ F M+ N+FT+ +L+ C VG LD+ G+Q+
Sbjct: 380 VVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDL--GEQI 437
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + GF+ +V V + LIDMY+K G L +A + + E DVVSWT++ISGY +
Sbjct: 438 HTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLF 497
Query: 196 DEAVVLFERMKLEGLEPNQFTY-----------------------------------NAI 220
EA+ F+ M G++ + + NA+
Sbjct: 498 AEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNAL 557
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
++ YAR G A+ F ++ A+ D ++WN +ISGFAQS +ALK+F M + +
Sbjct: 558 VSLYARCGRIKEAYLEFEKIDAK----DSISWNGLISGFAQSGYCEDALKVFAQMNRAKL 613
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+ + T + A +I+ G++IHA++ + G D+ +ALI Y+KCGS++DAR
Sbjct: 614 EASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARR 673
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
F KN SWNAMI Y +HG + ++ LFE+M + G N VT + VLSACSH GL
Sbjct: 674 EFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGL 733
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V KGL F SM + +G+ HYACVVD++ R+G + A + ++P+ ++
Sbjct: 734 VTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLL 793
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+ C +H ++ + E+ +V+LSN+ A G+W + R++M+ + V+K
Sbjct: 794 SACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKK 853
Query: 521 QPGFSRVEKRN 531
+PG S +E +N
Sbjct: 854 EPGRSWIEVKN 864
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 229/468 (48%), Gaps = 46/468 (9%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C+ S +L + K++H +L N L +KLV VY GD++ VF+ +PN +
Sbjct: 16 LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRS 75
Query: 78 VFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVG-LLDIKKGKQ 134
V +W + S F + FS M E + +F+ VL+AC G + I+ +Q
Sbjct: 76 V--RSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQ 133
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+HA G + N LI +Y+K GL+ SAR+VF + +D VSW +MISG+
Sbjct: 134 IHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGY 193
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
+EA+ LF M G+ P + + NA
Sbjct: 194 EEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNA 253
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ Y+R + +A FS+M ++ D V++N++ISG AQ + AL+LF M
Sbjct: 254 LVTLYSRMPNFVSAEKVFSKMQSK----DEVSFNSLISGLAQQGFSDGALELFTKMKRDY 309
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+KP+ VTV +L A G++ G ++H+ V + G+ D+ AL+D+Y C +K A
Sbjct: 310 LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F + +NV WN M+ +GK + S +F +M +G+ N+ T S+L C+ G
Sbjct: 370 EMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVG 429
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
++ G +I + + G + + + ++DM + G++ A+ +LR +
Sbjct: 430 ALDLGEQIHTQVI-KTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTL 476
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 219/448 (48%), Gaps = 39/448 (8%)
Query: 29 LRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
+R +Q+HA ++C L + + L+G+YA G + SAR VFD + + ++W+ M
Sbjct: 128 IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKD--SVSWVAMI 185
Query: 88 SAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
S F+ N +EAI F M + FS VL C + G+Q+HA+ + G
Sbjct: 186 SGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSS 245
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+ V NAL+ +YS+ SA +VF M +D VS+ S+ISG D A+ LF +M
Sbjct: 246 LETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKM 305
Query: 206 KLEGLEPNQFTYNAIIASYAR-----RGDSNAAF----AFFSRMTAEGFVPDL------- 249
K + L+P+ T +++++ A +G+ ++ S M EG + DL
Sbjct: 306 KRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDI 365
Query: 250 ---------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
V WN M+ F + +E+ ++F+ M + G+ PN T +L+
Sbjct: 366 KTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTC 425
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
G++ +G +IH V + G +V+ S LIDMY+K G L A + +V SW
Sbjct: 426 TSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWT 485
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKE 413
A+I Y +H + +++ F+ ML G++++ + S +SAC+ + +G +I +S
Sbjct: 486 ALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVS 545
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAY 441
Y +S + +V + R GR+ EAY
Sbjct: 546 GYSEDLSIGN--ALVSLYARCGRIKEAY 571
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 154/329 (46%), Gaps = 40/329 (12%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
T+ +L C+ + + K++H ++GF N+ + N L+D+Y G L +VF M
Sbjct: 12 TYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM 71
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------- 217
R V SW +ISG+ + + LF M E + P + ++
Sbjct: 72 PNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYA 131
Query: 218 -------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
N +I YA+ G +A F + + D V+W AMISG
Sbjct: 132 EQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTK----DSVSWVAMISG 187
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
F+Q+ E EA+ LF M +GI P + VL +G ++HALV + G ++
Sbjct: 188 FSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLE 247
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+ +AL+ +YS+ + A +F + K+ S+N++I + G D ++ELF +M
Sbjct: 248 TYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKR 307
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEI 407
+ ++ + VT+ S+LSAC+ G + KG ++
Sbjct: 308 DYLKPDCVTVASLLSACASNGALCKGEQL 336
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%)
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
GI N T +L +GS+ +++H + ++G + + L+D+Y G L
Sbjct: 5 GICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGV 64
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
+FE ++V SW+ +I + + M + ++LF M+EE + E++ SVL ACS
Sbjct: 65 VKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACS 122
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 296/563 (52%), Gaps = 60/563 (10%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C K +RQ + +H+++ + L + + L YA G ++ A+ VFD+ +V
Sbjct: 235 LSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDV 291
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
N M+ A A G+ EA F+ M +K T + A G ++ G+ +HA
Sbjct: 292 VSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTL---VNASTGCSSLRFGRMIHAC 348
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
A + G + D+ +GNAL+DMY++CG AR +F G+ + VSW +MI+G ++ A
Sbjct: 349 ALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGI-PGNAVSWNTMIAGSSQKGQMKRA 407
Query: 199 VVLFERMKLEGLEPNQFTY---------------------------------------NA 219
+ LF+RM+LEG+ P + TY A
Sbjct: 408 LELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTA 467
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YA G + A A F R E D+V+WNA+IS +Q AL F+ M + G
Sbjct: 468 VVKMYASCGAIDEAAASFQRGAMEDR-HDVVSWNAIISSLSQHGHGKRALGFFRRMDLHG 526
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ PN +T VL A ++ G +H + G+ +VF +AL MY +CGSL+ AR
Sbjct: 527 VAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAR 586
Query: 340 TLFEITRI-KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+FE + ++V +NAMI Y ++G+ +++LF RM +EG R +E + +SVLSACSHG
Sbjct: 587 EIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHG 646
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR----QVPMYVTNS 454
GL ++G EIFRSM++ YG+ S++HYAC VD+L R+G + +A +L+R + + V +
Sbjct: 647 GLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKT 706
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMK 514
+ GA R ++ R LA +M E+ +V+LSNI A G+W EA +R M+
Sbjct: 707 LLGACRKYRDV-DRGRLANSM---VRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEME 762
Query: 515 EKNVQKQPGFSRVE---KRNEFV 534
+ ++KQ G S +E + +EFV
Sbjct: 763 SRGLRKQAGKSWIEIKSRVHEFV 785
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 203/410 (49%), Gaps = 46/410 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL + L QG+++HA + + L L + L+ +Y C + VF ++ +
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLE-EELGNHLLRLYLKCESLGDVEEVFSRLEVRD- 92
Query: 79 FMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+W + +A+T G + AI F M++ RC+ TF VLKAC L D+ +G+ +H
Sbjct: 93 -EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIH 151
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + G E + N L+ +Y CG + SA +F M ERD+VSW + I+ +D
Sbjct: 152 AWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLD 210
Query: 197 EAVVLFERMKLEGLEPNQFTY--------------------------------NAIIASY 224
A+ LF+RM+LEG+ P + T A+ ++Y
Sbjct: 211 MALELFQRMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESGLEQTLVVSTALASAY 270
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
AR G + A F R D+V+WNAM+ +AQ +EA LF ML GI P+
Sbjct: 271 ARLGHLDQAKEVFDRAAER----DVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSK 326
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
VT ++ A S++ GR IHA GL D+ G+AL+DMY++CGS ++AR LFE
Sbjct: 327 VT---LVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEG 383
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
N SWN MI + G + ++ELF+RM EGM T +++L A
Sbjct: 384 I-PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA 432
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 13/128 (10%)
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
+L+A G + GR IHA + +GL ++ G+ L+ +Y KC SL D +F +++
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HG 398
ASW +I Y +HG +I +F RM +EG+R + VT ++VL AC+ H
Sbjct: 93 EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152
Query: 399 GLVEKGLE 406
+VE GLE
Sbjct: 153 WIVESGLE 160
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/521 (31%), Positives = 279/521 (53%), Gaps = 53/521 (10%)
Query: 20 LGKCMKSKALRQGKQVHA-----LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L C K +L GKQ+HA L C + + S +V +YA CG AR VF +
Sbjct: 301 LTACAKLSSLGWGKQLHAQVIRSLPCIDPY----VASAMVELYAKCGCFKEARRVFSSLR 356
Query: 75 NPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ N ++W V+ F G F E++ F+ MR + ++F + ++ C +D+
Sbjct: 357 DRNT--VSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLA 414
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+Q+H+++ + G V + N+LI MY+KCG L +A +F M ERD+VSWT M++ Y V
Sbjct: 415 RQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQV 474
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
G+ A FF M+ +++TW
Sbjct: 475 -----------------------------------GNIGKAREFFDGMSTR----NVITW 495
Query: 253 NAMISGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
NAM+ + Q E + LK++ ML + P+ VT + + G+ ++G +I
Sbjct: 496 NAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTV 555
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
++GL +D +A+I MYSKCG + +AR +F+ K++ SWNAMI Y +HGM +IE
Sbjct: 556 KVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIE 615
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
+F+ ML++G + + ++ ++VLS+CSH GLV++G F +K + V EH++C+VD+L
Sbjct: 616 IFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLL 675
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
R+G ++EA +L+ ++PM T + GA + C HG +LA + F++ G++
Sbjct: 676 ARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYM 735
Query: 492 MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+L+ I A G+ ++ +RK+M++K ++K PG+S +E +N+
Sbjct: 736 LLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNK 776
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 183/394 (46%), Gaps = 50/394 (12%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVN 64
+F N L YL C G ++ L +G + T+++ ++ YA G ++
Sbjct: 63 VFLQNTLLHAYLSC--GALPDARGLLRGDITEPNVITHNI--------MMNGYAKLGSLS 112
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKAC 123
A +F ++P +V N ++ +G F +A+ F S+ R N FTF +K+C
Sbjct: 113 DAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSC 172
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
L + Q+ + T+ GF+ D V ++DM+ +CG
Sbjct: 173 GALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCG--------------------- 211
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE 243
VD A F +++ P F N+++A YA+ + A F M
Sbjct: 212 ----------AVDFASKQFSQIE----RPTVFCRNSMLAGYAKSYGVDHALELFESMPER 257
Query: 244 GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
D+V+WN M+S +QS R EAL + M G++ ++ T T L A S+ G
Sbjct: 258 ----DVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWG 313
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
+++HA V R ID + SA++++Y+KCG K+AR +F R +N SW +IG + ++
Sbjct: 314 KQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQY 373
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
G S+ELF +M E M ++ L +++S CS+
Sbjct: 374 GCFSESLELFNQMRAELMTVDQFALATIISGCSN 407
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF--EITRIKNVASWNAMIGCYGKHG 364
H + +GL VF + L+ Y CG+L DAR L +IT NV + N M+ Y K G
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITE-PNVITHNIMMNGYAKLG 109
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
+ + ELF RM R + + +++S G +E F SM+
Sbjct: 110 SLSDAEELFGRM----PRRDVTSWNTLMSGYYQSGRFLDAMESFVSMR 153
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 190/553 (34%), Positives = 283/553 (51%), Gaps = 43/553 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C L G+ VHA L ++ +L + L +YA C AR VFD++P +
Sbjct: 65 LLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRD 124
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N +V A G + A+ M+E R + T VL AC + ++ H
Sbjct: 125 RVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAH 184
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A A + G E V+V A++D Y KCG + +AR VF M ++ VSW +MI GY
Sbjct: 185 AFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSR 244
Query: 197 EAVVLFERMKLEG-----------------------------------LEPNQFTYNAII 221
EA+ LF RM EG L+ N NA+I
Sbjct: 245 EALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALI 304
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y++ + A F + V+WNAMI G AQ+ +A++LF M + +K
Sbjct: 305 TMYSKCKRVDLASHVFDELDRR----TQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360
Query: 282 PNNVTVTGVLQA-GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P++ T+ V+ A ++ +Q R IH R+ L DV+ +ALIDMY+KCG + AR
Sbjct: 361 PDSFTLVSVIPALADISDPLQ-ARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARI 419
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
LF R ++V +WNAMI YG HG +++ELFE M G+ NE T +SVLSACSH GL
Sbjct: 420 LFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGL 479
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V++G E F SMKE YG++ EHY +VD+L R+G++ EA+ ++++PM S+ GA
Sbjct: 480 VDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAML 539
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
C +H +LA ++ FE+G ++ V+L+NI A W + +R M++ +QK
Sbjct: 540 GACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQK 599
Query: 521 QPGFSRVEKRNEF 533
PG+S ++ +NE
Sbjct: 600 TPGWSIIQLKNEI 612
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 210/460 (45%), Gaps = 70/460 (15%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
TF+ +LK C D+ G+ VHA G +++ AL +MY+KC ARRVF M
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMK-LEGLEPNQFTY---------------- 217
RD V+W ++++GY A+ + RM+ EG P+ T
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 218 -------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
AI+ +Y + GD AA F M + + V+WNAMI G
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTK----NSVSWNAMIDG 236
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
+AQ+ EAL LF M+ G+ +V+V LQA G G + G +H L+ R+GL +
Sbjct: 237 YAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSN 296
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI-GCYGKHGMVDSSIELFERML 377
V +ALI MYSKC + A +F+ + SWNAMI GC ++G + ++ LF RM
Sbjct: 297 VSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGC-AQNGCSEDAVRLFTRMQ 355
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER----YGVKISKEH----YACVVD 429
E ++ + TL+SV+ A + +I ++ R Y +++ + ++D
Sbjct: 356 LENVKPDSFTLVSVIPALA---------DISDPLQARWIHGYSIRLHLDQDVYVLTALID 406
Query: 430 MLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
M + GR+ A ++ R+ + N+M +G HG AV + EE +G+
Sbjct: 407 MYAKCGRVNIARILFNSARERHVITWNAMI----HGYGSHGFGKAAVELFEEMKSIGI-V 461
Query: 487 PDGFVMLS--NICAADGEWHEAENLRKIMKEKNVQKQPGF 524
P+ LS + C+ G E MKE + +PG
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMKE-DYGLEPGM 500
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 1/126 (0%)
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
AL F M +G P T T +L+ G + GR +HA + G+ + +AL +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML-EEGMRANEV 386
MY+KC DAR +F+ +++ +WNA++ Y ++G+ ++E+ RM EEG R + +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 387 TLISVL 392
TL+SVL
Sbjct: 163 TLVSVL 168
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 181/580 (31%), Positives = 273/580 (47%), Gaps = 100/580 (17%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF------- 101
L + LV YA G + AR VFD+IP+PN F N ++ A A G +A F
Sbjct: 797 LLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPD 856
Query: 102 ------------------------SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ M + N ++F+ L AC D + G QVHA
Sbjct: 857 QCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHA 916
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ ++ DV +G+AL+DMY+KC ARRVF M ER++VSW S+I+ Y V E
Sbjct: 917 LVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGE 976
Query: 198 AVVLFERMKLEGLEPNQFTY------------------------------------NAII 221
A+VLF M G P++ T NA++
Sbjct: 977 ALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALV 1036
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPD---------------------------LVTWNA 254
YA+ G + AA F RM + V + ++ WN
Sbjct: 1037 DMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNV 1096
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
+I+ +AQ+ E EAL+LF + + P + T VL A G +Q+G++ H V + G
Sbjct: 1097 LIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEG 1156
Query: 315 LHID------VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
D VF G++L+DMY K GS+ D +FE ++ SWNAMI + ++G
Sbjct: 1157 FRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKD 1216
Query: 369 SIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
++ LFERML + VT+I VLSAC H GLVE+G FRSM E +G+ S++HY C++
Sbjct: 1217 ALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMI 1276
Query: 429 DMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
D+L R+G + E +L++++ M + + C +H ++ + FE+ R
Sbjct: 1277 DLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSG 1336
Query: 489 GFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+V+LSN+ A G+W + +R MK + V KQPG S +E
Sbjct: 1337 PYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWIE 1376
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 156/568 (27%), Positives = 248/568 (43%), Gaps = 74/568 (13%)
Query: 1 MNRL-IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVY 57
MN L I P + + L C C + L +Q+H + D N+ L + LV VY
Sbjct: 142 MNSLGIRPKDATMASVLSC----CAECLDLCGARQLHGHIAKRDFQSNVI-LGTALVDVY 196
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
C + AR FD I PN N +V G A+ F M R +T S
Sbjct: 197 GNCFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVS 256
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL------------- 164
+ AC +++G+ +HA + G+E+ V V ++++DMY+KCG +
Sbjct: 257 HAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMK 316
Query: 165 ------------------CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
A+RVF GM ER++VSW +M++GY + A++LF++M+
Sbjct: 317 DMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMR 376
Query: 207 LEGLEPNQFTYNAIIASYAR-----RGDSNAAFA----FFS---------RMTAE----- 243
E E + T +++++ +G+ AFA FFS RM ++
Sbjct: 377 QETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLR 436
Query: 244 ----------GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
G D +WN++ISG+ + AL M S + PN T + L A
Sbjct: 437 SAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAA 495
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
++ G +IHA + R G ID S LIDMY KC + +FE ++V W
Sbjct: 496 CANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILW 555
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
N+MI G + ++LF+ M ++G++A+ VT + L +C G V G F M +
Sbjct: 556 NSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMD 615
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAV 473
+ EHY C++++L + G MVE D + +P T +M + C +G R L
Sbjct: 616 E-SIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGE 674
Query: 474 TMGEEFFEMGLRKPDGFVMLSNICAADG 501
+ + P FV + + DG
Sbjct: 675 RAAKCINDSNPLTPVQFVATVDYESNDG 702
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 234/516 (45%), Gaps = 78/516 (15%)
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
A CG V AR +FD +P + N ++ AS+ G+ EA+ FS M R T +
Sbjct: 96 AACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMA 155
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
VL C LD+ +Q+H + F+++V +G AL+D+Y C LL ARR F + E
Sbjct: 156 SVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEP 215
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------- 217
+ +SW ++ Y D AV +F RM G+ P +T
Sbjct: 216 NAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIH 275
Query: 218 ---------------NAIIASYARRGDSNAAFAFF---------------SRMTAEGFVP 247
++++ YA+ G +AA + F S + + G +
Sbjct: 276 AFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIA 335
Query: 248 D------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
D LV+WNAM++G+ +S AL LF+ M + + +T+ VL A
Sbjct: 336 DAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSA-- 393
Query: 296 LTGSIQIGR--EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART--LFEITRIKNVA 351
TG + IG+ E+HA + G +AL+ MYSKCG L+ A LFE+ ++
Sbjct: 394 CTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSY 453
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SWN++I Y +H M ++++ +M E + N+ T S L+AC++ L+++G++I M
Sbjct: 454 SWNSLISGYERHSMSEAALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQGMQIHAYM 512
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGR 468
R G +I + ++DM C+ + + + P + + NSM GC G+
Sbjct: 513 I-RKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMI----FGCAYSGK 567
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+ + + +E + G+ K D L + + E H
Sbjct: 568 GEYGLDLFDEMQKQGI-KADSVTFLGALVSCISEGH 602
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 150/329 (45%), Gaps = 45/329 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C A R+G+QVHA + +D L + LV +YA CG +AR VFD++
Sbjct: 996 LASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRM 1055
Query: 74 PN-------------------------------PNVFMLNWMVMASAFTGNFQEAIGYF- 101
+ NV N ++ A A G +EA+ F
Sbjct: 1056 ASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFV 1115
Query: 102 SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF------ENDVSVGNALI 155
L RE ++ + +T+ VL AC + D++ G+Q H + GF E+DV VGN+L+
Sbjct: 1116 RLKRESVWPTH-YTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLV 1174
Query: 156 DMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF 215
DMY K G + +VF M RD VSW +MI G+ + +A+ LFERM P+
Sbjct: 1175 DMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSV 1234
Query: 216 TYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
T ++++ G +F MT + G +P + MI ++ E +L K
Sbjct: 1235 TMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKE 1294
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
M ++P+ V +L + L ++++G
Sbjct: 1295 M---SMEPDAVLWASLLGSCRLHKNVEMG 1320
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+ F + I+ + CGS+ DAR LF++ +++ SWNA+I + G ++ LF M
Sbjct: 83 VPTFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNM 142
Query: 377 LEEGMRANEVTLISVLSACS 396
G+R + T+ SVLS C+
Sbjct: 143 NSLGIRPKDATMASVLSCCA 162
>gi|2191182|gb|AAB61067.1| similar to N. tabacum membrane-associated salt-inducible protein
(PID:g473874) [Arabidopsis thaliana]
Length = 597
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 286/531 (53%), Gaps = 26/531 (4%)
Query: 19 LLGKCMKS-KALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIP- 74
LL +C S K+LR+ K VH + T L ++ KS L+ VY C D SAR VF+
Sbjct: 36 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKS-LINVYFTCKDHCSARHVFENFDI 94
Query: 75 NPNVFMLN------WMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
+V++ N W + S F +G ++A+ F M + N + ++ + AC L
Sbjct: 95 RSDVYIWNSLMSASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRL 154
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
L +++GK++H + GFE D V +AL+DMY KC L AR VF M + +V+W SMI
Sbjct: 155 LWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMI 214
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD--------SNAAFAFFS 238
GY V + RM +EG P+Q T +I+ + +R + +N A FS
Sbjct: 215 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHANLAETVFS 274
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
+ + V + +WN MIS + +A++++ M+ G+KP+ VT T VL A
Sbjct: 275 KTQKD--VAE--SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 330
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
+++ G++IH + L D SAL+DMYSKCG+ K+A +F K+V SW MI
Sbjct: 331 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 390
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
YG HG ++ F+ M + G++ + VTL++VLSAC H GL+++GL+ F M+ +YG++
Sbjct: 391 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 450
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS-MAGAFRNGCNIHGRRDLAVTMGE 477
EHY+C++D+L R+GR++EAY++++Q P N+ + + C +H L +
Sbjct: 451 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 510
Query: 478 EFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
E +++L N+ A+ W A +R MKE ++K+PG S +E
Sbjct: 511 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIE 561
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 135/276 (48%), Gaps = 31/276 (11%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGC 60
+NR+I S L +L C +S+ L GK +HA
Sbjct: 230 LNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHA----------------------- 266
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSI 118
N A VF K +W VM S++ GN+ +A+ + M + + TF+
Sbjct: 267 ---NLAETVFSKTQKD--VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTS 321
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
VL AC L ++KGKQ+H ++ E D + +AL+DMYSKCG A R+F+ + ++D
Sbjct: 322 VLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKD 381
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
VVSWT MIS Y + + EA+ F+ M+ GL+P+ T A++++ G + FFS
Sbjct: 382 VVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFS 441
Query: 239 RMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFK 273
+M ++ G P + ++ MI ++ R EA ++ +
Sbjct: 442 QMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQ 477
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 273/509 (53%), Gaps = 32/509 (6%)
Query: 56 VYAGCGDVNS-ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKF 114
+Y C +++ + +F+ +PN N+ N +++ A + EA+G F L+++ ++
Sbjct: 255 MYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEV 314
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
+ S +AC + +G QVH ++ + ++++ V NA++DMY KCG L A VF M
Sbjct: 315 SLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM 374
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
RD VSW ++I+ + ++ + LF M G+EP++FTY +++ + A N
Sbjct: 375 VSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGM 434
Query: 235 AFF-----SRMTAEGFV--------------------------PDLVTWNAMISGFAQSK 263
SRM + FV +V+WNA+ISGF+ K
Sbjct: 435 EIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQK 494
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
+ EA K F ML G+ P+N T +L ++++G++IHA + + L D + S
Sbjct: 495 QSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISS 554
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
L+DMYSKCG+++D + +FE ++ +WNAM+ Y +HG+ + ++++FE M E ++
Sbjct: 555 TLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKP 614
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
N T ++VL AC H GLVEKGL F SM YG+ EHY+CVVD++ RSG++ +A +L
Sbjct: 615 NHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALEL 674
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ +P + + C IHG ++A ++ +V+LSNI A G W
Sbjct: 675 IEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMW 734
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+E LRK+M+ ++K+PG S +E ++E
Sbjct: 735 NEVTKLRKMMRFNGLKKEPGCSWIEIKSE 763
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 140/538 (26%), Positives = 229/538 (42%), Gaps = 116/538 (21%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+ +C KAL GKQ HA + + +F + + L+ +Y C D+ A VFD +P
Sbjct: 48 IFQECSDRKALCPGKQAHARMILTEFKPTVF-VTNCLIQMYIKCSDLGFAFKVFDGMPQR 106
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLM--------REFIYRC-------NKFTFSIVLK 121
+ N M+ A G+ A F M F +R ++ TF++VLK
Sbjct: 107 DTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLK 166
Query: 122 ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYS---------------------- 159
+C L D G Q+H +A +MGF+ DV G+AL+DMY+
Sbjct: 167 SCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKA 226
Query: 160 -------------------------------KCGLLCS-ARRVFHGMFERDVVSWTSMIS 187
KC L + ++F+ + ++ S+ ++I
Sbjct: 227 GVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIV 286
Query: 188 GYCNVSKVDEAVVLFERMK------------------------LEGLE-----------P 212
GY K EA+ +F ++ LEGL+
Sbjct: 287 GYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQS 346
Query: 213 NQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLF 272
N NAI+ Y + G A F M + D V+WNA+I+ Q+ E + L LF
Sbjct: 347 NICVANAILDMYGKCGALVEACLVFEEMVSR----DAVSWNAIIAAHEQNGNEEKTLSLF 402
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
ML SG++P+ T VL+A ++ G EIH + + + +D F G ALIDMYSKC
Sbjct: 403 VWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKC 462
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G ++ A L + + V SWNA+I + + + + F +MLE G+ + T ++L
Sbjct: 463 GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATIL 522
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHY--ACVVDMLCRSGRMVEAYDLLRQVP 448
C++ VE G +I + ++ ++ + Y + +VDM + G M + + + P
Sbjct: 523 DTCANLVTVELGKQIHAQIIKK---ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 577
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 132/259 (50%), Gaps = 2/259 (0%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKS-KLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C +AL G ++H + + + + S L+ +Y+ CG + A + D++
Sbjct: 420 VLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT 479
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V N ++ + +EA FS M E + FT++ +L C L+ ++ GKQ+HA
Sbjct: 480 VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA 539
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ ++D + + L+DMYSKCG + + +F RD V+W +M+ GY +E
Sbjct: 540 QIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEE 599
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMI 256
A+ +FE M+LE ++PN T+ A++ + G +F M + G P L ++ ++
Sbjct: 600 ALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVV 659
Query: 257 SGFAQSKRENEALKLFKGM 275
+S + ++AL+L +GM
Sbjct: 660 DIMGRSGQVSKALELIEGM 678
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 157/351 (44%), Gaps = 48/351 (13%)
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
K TFS + + C + GKQ HA F+ V V N LI MY KC L A +VF
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFD 101
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFE---------------RMKLEGLEPNQFTY 217
GM +RD VSW +M+ GY + A LF+ RM G ++ T+
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTF 161
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE----ALKLFK 273
++ S + D GF D+VT +A++ +A+ +N+ L+LFK
Sbjct: 162 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFK 221
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
M +G+ G LQ G HAL G DV G+A +DMY KC
Sbjct: 222 EMQKAGV--------GALQLHG-----------HALKTDFG--TDVVIGTATLDMYMKCN 260
Query: 334 SLKD-ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
+L D + LF N+ S+NA+I Y + ++ +F + + G+ +EV+L
Sbjct: 261 NLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAX 320
Query: 393 SACS--HGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
AC+ G L +GL++ SMK I + ++DM + G +VEA
Sbjct: 321 RACAVIKGDL--EGLQVHGLSMKSLCQSNICVAN--AILDMYGKCGALVEA 367
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/516 (33%), Positives = 280/516 (54%), Gaps = 15/516 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGD---VNSARLVFDKI 73
+L ++K+L + +Q HA + L + FS SKLV A + V+ A + ++I
Sbjct: 12 ILSFTERAKSLLEIQQAHAFMLKTGLFHDTFS-ASKLVAFAATNPEPKTVSYAHSILNRI 70
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+PN F N ++ A A + + A+ F M +K++F+ VLKAC ++G+
Sbjct: 71 ESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGR 130
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H + + DV V N LI++Y + G AR+V M RD VSW S++S Y +
Sbjct: 131 QIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDKG 190
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
V+EA LF+ M+ E N ++N +I+ YA G A F M V D+V+WN
Sbjct: 191 LVEEARALFDEME----ERNVESWNFMISGYAAAGLVKEAREVFDSMP----VKDVVSWN 242
Query: 254 AMISGFAQSKRENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
AM++ +A NE L++F ML S +P+ T+ VL A GS+ G +H + +
Sbjct: 243 AMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDK 302
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
G+ I+ F +AL+DMYSKCG + A +F T ++V++WN++I HG+ ++E+
Sbjct: 303 HGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEI 362
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F M+ EG + N +T I VLSAC+H GL+++ ++F M YG++ + EHY C+VD+L
Sbjct: 363 FSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLG 422
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
R G+ EA +L+ +VP + + + C G+ + A + E R+ G+V
Sbjct: 423 RMGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQ 482
Query: 493 LSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+SN+ A+ G W EA +R M+ + V+K PG S +E
Sbjct: 483 MSNLYASHGRWDEAMEVRGKMRAERVKKNPGCSMIE 518
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/616 (29%), Positives = 307/616 (49%), Gaps = 117/616 (18%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C +++ Q K++H L+ + N + L + L+ Y+ G++ AR VFDK+P PN F
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF-- 72
Query: 82 NWMVMASAFT---------------------------------GNFQEAI-GYFSLMREF 107
+W M SA++ G+ EA+ Y S+M++
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 108 IYRCNKFTFSIVL-----KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
+ N+ TFS +L + CV L G+Q+H + GF V VG++L+DMY+K G
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDL-----GRQIHGQIVKFGFGAYVFVGSSLVDMYAKMG 187
Query: 163 LLCSA-------------------------------RRVFHGMFERDVVSWTSMISGYCN 191
L+ A +R+FHGM ERD +SWT+MI+G
Sbjct: 188 LVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQ 247
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS----------------YARRGDSNAAF- 234
EA+ LF M+ EG+ +Q+T+ +++ + R G ++ F
Sbjct: 248 NGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFV 307
Query: 235 ------------------AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
A F RM + ++V+W AM+ G+ Q+ EA+++F M
Sbjct: 308 GSALVDMYCKCRSVRYAEAVFKRMANK----NVVSWTAMLVGYGQNGFSEEAVRVFCDMQ 363
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+GI+P++ T+ V+ + S++ G + H GL + +ALI +Y KCGS++
Sbjct: 364 RNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIE 423
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
D+ LF+ ++ SW A++ Y + G + +I+LFERML +G++ + VT I+VLSACS
Sbjct: 424 DSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACS 483
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
GLVE+G + F SM + +G+ +HY C++D+ R+GR+ EA + + ++P +
Sbjct: 484 RAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGW 543
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
+ C ++G ++ E E+ + P G+++LS+I AA G+W LR+ M+EK
Sbjct: 544 ATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREK 603
Query: 517 NVQKQPGFSRVEKRNE 532
+K+PGFS ++ +++
Sbjct: 604 GARKEPGFSWIKYKSK 619
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 152/289 (52%), Gaps = 7/289 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C +AL++GK++H L+ + + N+F + S LV +Y C V A VF ++ N
Sbjct: 276 VLTACGGLRALKEGKEIHTLIIRSGYNHNVF-VGSALVDMYCKCRSVRYAEAVFKRMANK 334
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV M++ G +EA+ F M+ + FT V+ +C L +++G Q H
Sbjct: 335 NVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFH 394
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A G + ++V NALI +Y KCG + + ++F M RD VSWT+++SGY K +
Sbjct: 395 CQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKAN 454
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAM 255
E + LFERM ++GL+P+ T+ A++++ +R G +F M + G +P + M
Sbjct: 455 ETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCM 514
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
I F ++ R EA M S P+++ +L + L G+ +IG+
Sbjct: 515 IDLFGRAGRLEEAKNFINKMPFS---PDSIGWATLLSSCRLYGNEEIGK 560
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 288/550 (52%), Gaps = 43/550 (7%)
Query: 30 RQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
R Q+H L + L N F L +KLV + G + AR +FD+ P+VFM N ++ +
Sbjct: 70 RHLDQIHNRLVISGLQHNGF-LMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRS 128
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ +++ + + MR + FTF VLKAC LLD +H + GF +D
Sbjct: 129 YSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSD 188
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V V N L+ +Y+KCG + A+ VF G++ R +VSWTS+ISGY K EA+ +F +M+
Sbjct: 189 VFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRN 248
Query: 208 EGLEPNQFTYNAII-----------------------------------ASYARRGDSNA 232
G++P+ +I+ A YA+ G
Sbjct: 249 NGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTV 308
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
A +FF +M +++ WNAMISG+A++ EA+ LF M+ IKP++VTV +
Sbjct: 309 AKSFFDQMKTT----NVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVL 364
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A GS+++ + + V + D+F ++LIDMY+KCGS++ AR +F+ K+V
Sbjct: 365 ASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVM 424
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
W+AMI YG HG +I L+ M + G+ N+VT I +L+AC+H GLV++G E+F MK
Sbjct: 425 WSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMK 484
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLA 472
+ + + EHY+CVVD+L R+G + EA + ++P+ S+ GA + C I+ L
Sbjct: 485 D-FEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLG 543
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ F + +V LSN+ A+ W ++R +M+EK + K G+S +E +
Sbjct: 544 EYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGK 603
Query: 533 FVEKEVQNES 542
V ++S
Sbjct: 604 LQAFHVGDKS 613
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 280/517 (54%), Gaps = 45/517 (8%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C + +LR GKQ+HA + N I + S LV +YA CG A+ VF+ + + N
Sbjct: 277 LTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRN- 335
Query: 79 FMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ W V+ + F G F E++ F+ MR + ++F + ++ C +D+ G+Q+H
Sbjct: 336 -NVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLH 394
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ + G V V N+LI MY+KC L SA +F M E+D+VSWTSMI+ + V
Sbjct: 395 SLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQV---- 450
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
G+ A FF M+ + +++TWNAM+
Sbjct: 451 -------------------------------GNIAKAREFFDGMSTK----NVITWNAML 475
Query: 257 SGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ Q E + L+++ ML ++P+ VT + + G+ ++G +I ++GL
Sbjct: 476 GAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 535
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+D +A+I MYSKCG + +AR +F+ +K++ SWNAMI Y +HGM +IE+F+
Sbjct: 536 ILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDD 595
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
+L+ G + + ++ ++VLS CSH GLV++G F MK + + EH++C+VD+L R+G
Sbjct: 596 ILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAG 655
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
+ EA DL+ ++PM T + GA + C IHG +LA + FE+ +++++
Sbjct: 656 HLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAK 715
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
I A G+ ++ +RK+M++K ++K PG+S +E N+
Sbjct: 716 IYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNK 752
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 166/380 (43%), Gaps = 72/380 (18%)
Query: 49 LKSKLVGVYAGCGDVNSAR-LVFDKIPNPNVFMLNWMVMASAFTGNFQEAI--------- 98
L++ L+ Y CG + AR L+ I +PNV N M+ G +A+
Sbjct: 41 LQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPAR 100
Query: 99 ----------GYF-------------SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
GYF S+ R N FTF+ +K+C L + Q+
Sbjct: 101 DVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQL 160
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
+ + G ++D V AL+DM+ +CG V
Sbjct: 161 LGMVQKFGSQDDSDVAAALVDMFVRCG-------------------------------TV 189
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
D A LF R+K EP F N+++ Y + + A F M D+V+WN M
Sbjct: 190 DLASRLFVRIK----EPTIFCRNSMLVGYVKTYGVDHALELFDSMPER----DVVSWNMM 241
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+S +QS R EAL + M G++ ++ T T L A S++ G+++HA V R
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLP 301
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
ID + SAL+++Y+KCG K+A+ +F +N +W +I + +HG S+ELF +
Sbjct: 302 CIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQ 361
Query: 376 MLEEGMRANEVTLISVLSAC 395
M E M ++ L +++S C
Sbjct: 362 MRAELMTLDQFALATLISGC 381
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 126/316 (39%), Gaps = 74/316 (23%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
F+ L++C + + +H +G + V + N L+ Y CG L ARR +
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARR----L 61
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
D+ PN T+N ++ Y + G + A
Sbjct: 62 LLTDIA------------------------------HPNVITHNVMLNGYVKLGRLSDAV 91
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGVLQA 293
F RM A D+ +WN ++SG+ QS++ +L+ F M SG PN T +++
Sbjct: 92 ELFGRMPAR----DVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKS 147
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK----- 348
G G + ++ +V + G D +AL+DM+ +CG++ A LF RIK
Sbjct: 148 CGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLF--VRIKEPTIF 205
Query: 349 ----------------------------NVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
+V SWN M+ + G V ++++ M +G
Sbjct: 206 CRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 265
Query: 381 MRANEVTLISVLSACS 396
+R + T S L+AC+
Sbjct: 266 VRLDSTTYTSSLTACA 281
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/552 (30%), Positives = 279/552 (50%), Gaps = 41/552 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L L C++S G+ +H + + F + S LV +YA D+ AR VF++IP
Sbjct: 169 LSLALKACIRSAEYSYGRSLHCDAIKVGGADGFVMNS-LVDMYAKAEDLECARKVFERIP 227
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ NV M+ G + + F+ MR+ +++T + V+ AC L + +G+
Sbjct: 228 DRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRW 287
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + G ++ + AL+DMY KCG L AR VF + D+V WT+MI GY
Sbjct: 288 MHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGN 347
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
+A+ LF + + PN T NA
Sbjct: 348 PLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNA 407
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YA+ + A F R++ + D+V WN+MISG+A++ ++AL LFK M + G
Sbjct: 408 LVDMYAKCQAVSEADRIFGRISNK----DVVAWNSMISGYAENNMGDDALMLFKQMSLQG 463
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
P+ ++V L A G + IG+ IH + +++ +AL+++Y+KCG L AR
Sbjct: 464 SSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSAR 523
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ +N +W AMIG YG G SI LF ML++G+ N++ S+LS CSH G
Sbjct: 524 RVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSG 583
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
+V G F SM + + + S +HYAC+VD+L R+G + +A + + +PM S+ GAF
Sbjct: 584 MVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAF 643
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+GC +H R A + + +PD +V++SN+ ++G W ++ +R+ M+EK +
Sbjct: 644 LHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLYTSNGMWDKSLAIRRWMQEKGLV 703
Query: 520 KQPGFSRVEKRN 531
K PG S V N
Sbjct: 704 KLPGCSSVGHEN 715
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 208/427 (48%), Gaps = 52/427 (12%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTND----LNIFSLKSKLVGVYAGCGDVNSA 66
LS L LL C +LR +HA L T+ L ++KL+ YA GD+ SA
Sbjct: 60 LSAGDLLRLLPSCGTLLSLRV---LHARLLTHPQGLLLGSLRARTKLLSCYAALGDLASA 116
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC----NKFTFSIVLKA 122
R+VFD P P+ + M+ T +A+ MR C + F S+ LKA
Sbjct: 117 RMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRR-RPCPEAQDDFVLSLALKA 175
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C+ + G+ +H A ++G D V N+L+DMY+K L AR+VF + +R+VVSW
Sbjct: 176 CIRSAEYSYGRSLHCDAIKVGGA-DGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSW 234
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------- 223
TSMISG + ++LF +M+ + + P+++T +I +
Sbjct: 235 TSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIK 294
Query: 224 ----------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
Y + G+ + A F ++ DLV W MI G+ Q+ +
Sbjct: 295 QGLMSNSFISAALLDMYVKCGELDHARCVFDELS----YIDLVLWTTMIVGYTQNGNPLD 350
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
AL+LF + I PN+VT VL A + +G+ IH L ++GL G+AL+D
Sbjct: 351 ALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVD 410
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MY+KC ++ +A +F K+V +WN+MI Y ++ M D ++ LF++M +G + ++
Sbjct: 411 MYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAIS 470
Query: 388 LISVLSA 394
+++ LSA
Sbjct: 471 VVNALSA 477
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 25/231 (10%)
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+++ YA GD +A RM +G PD ++ AM+ Q++R +A+ L M
Sbjct: 103 LLSCYAALGDLASA-----RMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRR 157
Query: 279 GIKP---NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
P ++ ++ L+A + GR +H ++G D F ++L+DMY+K L
Sbjct: 158 RPCPEAQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDL 216
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ AR +FE +NV SW +MI ++G + LF +M ++ + +E T+ +V++AC
Sbjct: 217 ECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITAC 276
Query: 396 S-----------HGGLVEKGLE----IFRSMKERYGVKISKEHYACVVDML 431
S HG ++++GL I ++ + Y +H CV D L
Sbjct: 277 SALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDEL 327
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 178/558 (31%), Positives = 286/558 (51%), Gaps = 50/558 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C S+AL G+++H+L+ T D S+ + LV +Y CG ++ A LVF ++P P
Sbjct: 443 ILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLP 502
Query: 77 NVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ ++ W VM A+ N +EA G M + + +F+ VL +C ++ +
Sbjct: 503 SRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYC---SQEAQV 559
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+ + G+ + + ALI M+ +C L AR VF+ M DVVSWT+M+S
Sbjct: 560 LRMCILESGYRS-ACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRD 618
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
E LF RM+LEG+ P++FT NA
Sbjct: 619 FKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENA 678
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ Y+ GD A +FF M A DLV+WN M + +AQ+ EA+ LF+ M + G
Sbjct: 679 LLNMYSNCGDWREALSFFETMKAR----DLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEG 734
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+KP+ +T + L G + + G+ HAL GL DV + L+ +Y+KCG L +A
Sbjct: 735 VKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAM 794
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+LF V NA+IG +HG + ++++F +M +EG+R + TL+S++SAC H G
Sbjct: 795 SLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAG 854
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
+VE+G F +MKE +G+ + EHYAC VD+L R+G++ A ++R++P + +
Sbjct: 855 MVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSL 914
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C + G +L + E+ V+LSNI A G+W +A+ RK M ++NV+
Sbjct: 915 LGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVK 974
Query: 520 KQPGFSRVE---KRNEFV 534
PG S E + +EFV
Sbjct: 975 NAPGMSWFEIGKQVHEFV 992
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/488 (30%), Positives = 236/488 (48%), Gaps = 49/488 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C+ S L +GK H L+ L ++F L + L+ +Y CG + A +F K+
Sbjct: 31 LLQSCVDSNDLAKGKHAHELIANAGLEQHLF-LGNCLINMYVRCGSLEEAHAIFSKMEER 89
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
NV ++ A+A G F A F +++ E N +T +L AC D+ G+ +
Sbjct: 90 NVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSI 149
Query: 136 HAVATQMGFENDVS----VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
HA+ ++G E + VGNA+I+MY+KCG L A VF + E+DVVSWT+M Y
Sbjct: 150 HAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQ 209
Query: 192 VSKV-DEAVVLFERMKLEGLEPNQFTY--------------------------------N 218
+ +A+ +F M L+ L PN T+ N
Sbjct: 210 ERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEASLGFDPLASN 269
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+I Y + GD A++ F M + + DLV+WNAMIS ++ R +A+ +F+ + +
Sbjct: 270 ALINMYGKCGDWEGAYSVFKAMASRQEL-DLVSWNAMISASVEAGRHGDAMAIFRRLRLE 328
Query: 279 GIKPNNVTVTGVLQAGGLTG-SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G++PN+VT+ +L A +G R H + G DV G+A+I MY+KCG
Sbjct: 329 GMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSA 388
Query: 338 ARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
A +F R K +V SWN M+G + F ML G+ N+V+ I++L+ACS
Sbjct: 389 AWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACS 448
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM----YVT 452
+ ++ G +I + R + +V M + G + EA + +++P+ VT
Sbjct: 449 NSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVT 508
Query: 453 -NSMAGAF 459
N M GA+
Sbjct: 509 WNVMLGAY 516
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 202/430 (46%), Gaps = 58/430 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVG-----VYAGCGDVNSARLVF 70
L +L C S+ L G+ +HA++ L S + LVG +YA CG + A VF
Sbjct: 130 LVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVF 189
Query: 71 DKIPNPNVFMLNWMVMASAFTGN---FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
IP +V ++W MA A+ + +A+ F M N TF L AC L
Sbjct: 190 LAIPEKDV--VSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLR 247
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER---DVVSWTS 184
D G +H++ + D NALI+MY KCG A VF M R D+VSW +
Sbjct: 248 D---GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNA 304
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------- 217
MIS + +A+ +F R++LEG+ PN T
Sbjct: 305 MISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWES 364
Query: 218 ---------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
NAII+ YA+ G +AA+A F R+ + D+++WN M+ K +
Sbjct: 365 GYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIR---WKCDVISWNTMLGASEDRKSFGKV 421
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV-CRMGLHIDVFTGSALID 327
+ F ML++GI PN V+ +L A + ++ GR+IH+L+ R +++ + L+
Sbjct: 422 VNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVS 481
Query: 328 MYSKCGSLKDARTLFEITRI--KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
MY KCGS+ +A +F+ + +++ +WN M+G Y ++ + ML+ G+ +
Sbjct: 482 MYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDA 541
Query: 386 VTLISVLSAC 395
++ SVLS+C
Sbjct: 542 LSFTSVLSSC 551
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 159/329 (48%), Gaps = 51/329 (15%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
++ +L++CV D+ KGK H + G E + +GN LI+MY +CG L A +F M
Sbjct: 28 YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE-GLEPNQFTY----------------- 217
ER+VVSWT++IS A LF M LE PN +T
Sbjct: 88 ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 218 ----------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
NA+I YA+ G A A F + + D+V+W AM
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEK----DVVSWTAM 203
Query: 256 ISGFAQSKR-ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
+AQ +R +AL++F+ ML+ + PN +T L G S++ G +H+L+
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITAL---GACTSLRDGTWLHSLLHEAS 260
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK---NVASWNAMIGCYGKHGMVDSSIE 371
L D +ALI+MY KCG + A ++F+ + ++ SWNAMI + G ++
Sbjct: 261 LGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMA 320
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGL 400
+F R+ EGMR N VTLI++L+A + G+
Sbjct: 321 IFRRLRLEGMRPNSVTLITILNALAASGV 349
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 10/225 (4%)
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
D+ +T+++ + + + + E + GLE + F N +I Y R G A A F
Sbjct: 24 DLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGL 296
S+M ++V+W A+IS AQ A LF+ ML+ S PN+ T+ +L A
Sbjct: 84 SKMEER----NVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACAN 139
Query: 297 TGSIQIGREIHALVCRMGLH----IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
+ + IGR IHA++ +GL G+A+I+MY+KCGSL+DA +F K+V S
Sbjct: 140 SRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVS 199
Query: 353 WNAMIGCYGKH-GMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
W AM G Y + ++ +F ML + + N +T I+ L AC+
Sbjct: 200 WTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT 244
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 172/554 (31%), Positives = 290/554 (52%), Gaps = 46/554 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
++ C + + G+Q+H + + D ++ + ++ L+ +Y G + A VF I
Sbjct: 264 IIKACCIAGDIDLGRQLHGHVIKSGYDHHLIA-QNALISMYTRFGQIVHASDVFTMISTK 322
Query: 77 NVFMLNWMVMASAFT--GNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+ +++W M + FT G EA+ F + R+ Y+ N+F F V AC LL+ + G+
Sbjct: 323 D--LISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGR 380
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H + + G +V G +L DMY+K G L SA R F+ + D+VSW ++I+ + +
Sbjct: 381 QIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSG 440
Query: 194 KVDEAVVLFERMKLEGLEPNQFTY-----------------------------------N 218
V+EA+ F +M GL P+ T+ N
Sbjct: 441 DVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCN 500
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+++ Y + + + AF F ++ +LV+WNA++S Q K+ E +LFK ML S
Sbjct: 501 SLLTMYTKCSNLHDAFNVFKDVSENA---NLVSWNAILSACLQHKQAGEVFRLFKLMLFS 557
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
KP+N+T+T +L S+++G ++H + GL +DV + LIDMY+KCGSLK A
Sbjct: 558 ENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHA 617
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
R +F T+ ++ SW+++I Y + G+ ++ LF M G++ NEVT + VLSACSH
Sbjct: 618 RDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHI 677
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLVE+G + +M+ G+ ++EH +C+VD+L R+G + EA + ++++ +M
Sbjct: 678 GLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKT 737
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C HG D+A E ++ V+LSNI A+ G W E LR +MK+ V
Sbjct: 738 LLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGV 797
Query: 519 QKQPGFSRVEKRNE 532
QK PG S + +++
Sbjct: 798 QKVPGQSWIAVKDQ 811
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 236/467 (50%), Gaps = 49/467 (10%)
Query: 19 LLGKCMKSKALRQGKQVH-ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ C ++L+ GK++H +L +N L++ ++ +Y CG + AR FD + N
Sbjct: 163 LILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRN 222
Query: 78 VFMLNWMVMASAFTGNFQE--AIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
V ++W +M S ++ N QE AI + M + Y + TF ++KAC DI G+Q+
Sbjct: 223 V--VSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQL 280
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + G+++ + NALI MY++ G + A VF + +D++SW SMI+G+ +
Sbjct: 281 HGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYE 340
Query: 196 DEAVVLFERMKLEGL-EPNQFTYNAIIAS------------------------------- 223
EA+ LF M +G +PN+F + ++ ++
Sbjct: 341 IEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCS 400
Query: 224 ----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
YA+ G +A F ++ + PDLV+WNA+I+ F+ S NEA+ F M+ +G
Sbjct: 401 LCDMYAKFGFLPSAIRAFYQIES----PDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTG 456
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ P+ +T +L A G +I G +IH+ + ++GL + ++L+ MY+KC +L DA
Sbjct: 457 LMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAF 516
Query: 340 TLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+F +++ N+ SWNA++ +H LF+ ML + + +T+ ++L C+
Sbjct: 517 NVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAEL 576
Query: 399 GLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
+E G ++ S+K V +S + ++DM + G + A D+
Sbjct: 577 ASLEVGNQVHCFSVKSGLVVDVSVSNR--LIDMYAKCGSLKHARDVF 621
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 180/369 (48%), Gaps = 41/369 (11%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
T+ ++ AC + +K GK++H + + D+ + N +++MY KCG L AR+ F M
Sbjct: 159 TYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTM 218
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----- 229
R+VVSWT MISGY + ++A++++ +M G P+ T+ +II + GD
Sbjct: 219 QLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGR 278
Query: 230 -----------------SNAAFAFFSRM-----TAEGF----VPDLVTWNAMISGFAQSK 263
NA + ++R ++ F DL++W +MI+GF Q
Sbjct: 279 QLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLG 338
Query: 264 RENEALKLFKGMLVSGI-KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
E EAL LF+ M G +PN V A + GR+IH + + GL +VF G
Sbjct: 339 YEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAG 398
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+L DMY+K G L A F ++ SWNA+I + G V+ +I F +M+ G+
Sbjct: 399 CSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLM 458
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI--SKEHYAC--VVDMLCRSGRMV 438
+ +T +S+L AC + +G +I Y +KI KE C ++ M + +
Sbjct: 459 PDGITFLSLLCACGSPVTINQGTQI-----HSYIIKIGLDKEAAVCNSLLTMYTKCSNLH 513
Query: 439 EAYDLLRQV 447
+A+++ + V
Sbjct: 514 DAFNVFKDV 522
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 288/551 (52%), Gaps = 34/551 (6%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVF 70
V L +L C + + +G VH L LN + + L+ +Y+ C ++ A+L+F
Sbjct: 203 DVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLF 262
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMR--EFIYRCNKFTFSIVLKACVGLLD 128
DK N+ N M+ A + M+ + + ++FT VL C+ +
Sbjct: 263 DKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSE 322
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
++ K++H + + G +++ V NA I Y++CG LCS+ RVF M + V SW +++ G
Sbjct: 323 LQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCG 382
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR-----RGDSNAAFAFFSRMTAE 243
Y S +A+ L+ +M GL+P+ FT +++ + +R G+ FA + + +
Sbjct: 383 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD 442
Query: 244 GFV-------------P-------------DLVTWNAMISGFAQSKRENEALKLFKGMLV 277
F+ P LV+WN MI+G++Q+ +EA+ LF+ ML
Sbjct: 443 PFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS 502
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
GI+P + + V A ++++G+E+H + L D+F S++IDMY+K G +
Sbjct: 503 DGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGL 562
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
++ +F+ R K+VASWN +I YG HG ++ELFE+ML G++ ++ T +L ACSH
Sbjct: 563 SQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSH 622
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
GLVE GLE F M + ++ EHY CVVDML R+GR+ +A L+ ++P + +
Sbjct: 623 AGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWS 682
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
+ + C IHG L + + E+ KP+ +V++SN+ A G+W + +R MK+
Sbjct: 683 SLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIG 742
Query: 518 VQKQPGFSRVE 528
+QK G S +E
Sbjct: 743 LQKDAGCSWIE 753
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 152/521 (29%), Positives = 246/521 (47%), Gaps = 57/521 (10%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L C++ C L G+ +H + DL ++F + + L+ +Y CG V A VF+ +
Sbjct: 104 LPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVF-VGNALIAMYGKCGLVEEAVKVFEHM 162
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFS--LMREFIYRCNKFTFSIVLKACVGLLDIKK 131
P N+ N ++ + G QE+ F L+ E + + T VL C G DI+K
Sbjct: 163 PERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEK 222
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G VH +A ++G ++ V N+LIDMYSKC L A+ +F ++++VSW SMI GY
Sbjct: 223 GMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAR 282
Query: 192 VSKVDEAVVLFERMKLE-------------------------------------GLEPNQ 214
V L ++M+ E GL+ N+
Sbjct: 283 EEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNE 342
Query: 215 FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
NA IA+Y R G ++ F M + + +WNA++ G+AQ+ +AL L+
Sbjct: 343 LVANAFIAAYTRCGALCSSERVFDLMDTK----TVSSWNALLCGYAQNSDPRKALDLYLQ 398
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M SG+ P+ T+ +L A S+ G EIH R GL +D F G +L+ +Y CG
Sbjct: 399 MTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGK 458
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
A+ LF+ +++ SWN MI Y ++G+ D +I LF +ML +G++ E+ ++ V A
Sbjct: 459 PFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGA 518
Query: 395 CSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRM---VEAYDLLRQVPMY 450
CS + G E+ ++K I + ++DM + G + +D LR+ +
Sbjct: 519 CSQLSALRLGKELHCFALKAHLTEDIFVS--SSIIDMYAKGGCIGLSQRIFDRLREKDVA 576
Query: 451 VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
N + + IHGR A+ + E+ +GL KPD F
Sbjct: 577 SWNVIIAGY----GIHGRGKEALELFEKMLRLGL-KPDDFT 612
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 219/429 (51%), Gaps = 42/429 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLC--TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C + K + G+++H ++ T N F L ++++ +Y+ CG + +R+VFDK+
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 77 NVFMLNWMVMASAFTGN--FQEAIGYFS-LMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
N+F W + SA+T N F++A+ FS L+ ++ + FT V+KAC GLLD+ G+
Sbjct: 64 NLF--QWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 121
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+H +AT+M +DV VGNALI MY KCGL+ A +VF M ER++VSW S+I G+
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENG 181
Query: 194 KVDEAVVLFERMKL--EGLEPNQFTYNAIIASYARRGD---------------------- 229
+ E+ F M + E P+ T ++ A D
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241
Query: 230 SNAAFAFFS--RMTAEGFV-------PDLVTWNAMISGFAQSKRENEALKLFKGMLV--S 278
+N+ +S R +E + ++V+WN+MI G+A+ + L + M +
Sbjct: 242 NNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDA 301
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+K + T+ VL +Q +E+H R GL + +A I Y++CG+L +
Sbjct: 302 KMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSS 361
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+F++ K V+SWNA++ Y ++ +++L+ +M + G+ + T+ S+L ACS
Sbjct: 362 ERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM 421
Query: 399 GLVEKGLEI 407
+ G EI
Sbjct: 422 KSLHYGEEI 430
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 193/425 (45%), Gaps = 54/425 (12%)
Query: 118 IVLKACVGLLDIKKGKQVHA-VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE 176
++L+AC DI+ G+++H V+ F ND + +I MYS CG +R VF +
Sbjct: 3 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLF-ERMKLEGLEPNQFTY------------------ 217
+++ W +++S Y ++A+ +F E + + +P+ FT
Sbjct: 63 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 122
Query: 218 -----------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
NA+IA Y + G A F M +LV+WN++I GF+
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPER----NLVSWNSIICGFS 178
Query: 261 QSKRENEALKLFKGMLV--SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
++ E+ F+ MLV P+ T+ VL I+ G +H L ++GL+ +
Sbjct: 179 ENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEE 238
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+ ++LIDMYSKC L +A+ LF+ KN+ SWN+MIG Y + V + L ++M
Sbjct: 239 LMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQT 298
Query: 379 EG--MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
E M+A+E T+++VL C ++ L+ R+G++ ++ + R G
Sbjct: 299 EDAKMKADEFTILNVLPVCLERSELQS-LKELHGYSWRHGLQSNELVANAFIAAYTRCGA 357
Query: 437 MVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+ + +DL+ + N++ + + DL + M + + PD F +
Sbjct: 358 LCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLD-----PDWFTIG 412
Query: 494 SNICA 498
S + A
Sbjct: 413 SLLLA 417
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 282/517 (54%), Gaps = 45/517 (8%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C + +LR GKQ+HA + N +I + S LV +YA G A+ VF+ + + N
Sbjct: 297 LTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRN- 355
Query: 79 FMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ W V+ S F G F E++ F+ MR + ++F + ++ C +D+ G+Q+H
Sbjct: 356 -NVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLH 414
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ + G V V N+LI MY+KC L SA +F M E+D+VSWTSMI+
Sbjct: 415 SLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMIT--------- 465
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
+Y++ G+ A FF M+ + +++TWNAM+
Sbjct: 466 --------------------------AYSQVGNVAKAREFFDGMSEK----NVITWNAML 495
Query: 257 SGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ Q E + L+++K ML ++P+ VT + + G+ ++G +I ++GL
Sbjct: 496 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 555
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
ID +A+I MYSKCG + +AR +F+ +K++ SWNAMI Y +HGM +IE+F+
Sbjct: 556 IIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDD 615
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
+L+ G + + ++ ++VLS CSH GLV++G F MK + + EH++C+VD+L R+G
Sbjct: 616 ILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAG 675
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
+ EA DL+ +PM T + GA + C IHG +LA + FE+ +++++
Sbjct: 676 HLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAK 735
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
I A G+ ++ +RK+M++K ++K PG+S +E N+
Sbjct: 736 IYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNK 772
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 167/380 (43%), Gaps = 72/380 (18%)
Query: 49 LKSKLVGVYAGCGDVNSAR-LVFDKIPNPNVFMLNWMVMASAFTGNFQEAI--------- 98
L++ L+ Y CG ++ AR L+ I +PNV N M+ A G +A+
Sbjct: 61 LQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPAR 120
Query: 99 ----------GYF-------------SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
GYF S+ R N FT + +K+C L Q+
Sbjct: 121 DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQL 180
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
A+ + ++D V AL+DM+ +CG V
Sbjct: 181 LAMVQKFDSQDDSEVAAALVDMFVRCG-------------------------------AV 209
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
D A LF R+K EP F N+++A Y + + A F M D+V+WN M
Sbjct: 210 DLASRLFVRIK----EPTMFCRNSMLAGYVKTYGVDHALELFDSMPER----DVVSWNMM 261
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+S +QS R EAL + M G++ ++ T T L A S++ G+++HA V R
Sbjct: 262 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLP 321
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
HID + SAL+++Y+K G K+A+ +F +N +W +I + ++G S+ELF +
Sbjct: 322 HIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQ 381
Query: 376 MLEEGMRANEVTLISVLSAC 395
M E M ++ L +++S C
Sbjct: 382 MRAELMTLDQFALATLISGC 401
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 172/381 (45%), Gaps = 67/381 (17%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
F+ L++C + + +H +G + V + N L+ Y CG L ARR+
Sbjct: 27 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRL----- 81
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
+ ++ PN T+N ++ YA+ G + A
Sbjct: 82 -----------------------------LLMDIAHPNVITHNVMLNGYAKLGRLSDAVE 112
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK-PNNVTVTGVLQAG 294
F RM A D+ +WN ++SG+ QS++ +L+ F M SG PN T+ +++
Sbjct: 113 LFGRMPAR----DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSC 168
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW- 353
G G + ++ A+V + D +AL+DM+ +CG++ A LF RIK +
Sbjct: 169 GALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLF--VRIKEPTMFC 226
Query: 354 -NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
N+M+ Y K VD ++ELF+ M E + V+ ++SA S G V + L++ M+
Sbjct: 227 RNSMLAGYVKTYGVDHALELFDSMPERDV----VSWNMMVSALSQSGRVREALDMVVDMQ 282
Query: 413 ERYGVKISKEHY-----ACVVDMLCRSGRMVEAYDLLRQVPM---YVTNSMAGAF-RNGC 463
+ GV++ Y AC R G+ + A ++R +P YV +++ + ++GC
Sbjct: 283 SK-GVRLDSTTYTSSLTACARLSSLRWGKQLHA-QVIRNLPHIDPYVASALVELYAKSGC 340
Query: 464 ---------NIHGRRDLAVTM 475
++H R ++A T+
Sbjct: 341 FKEAKGVFNSLHDRNNVAWTV 361
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/466 (35%), Positives = 253/466 (54%), Gaps = 38/466 (8%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+ FTF VLK+C + I +G+QVH V +MGF ++ V N+L+ YS C A RVF
Sbjct: 33 DMFTFPAVLKSCAKFVGIGEGRQVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVF 92
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG--- 228
M RDVVSWT +ISGY DEAV LF RM +EPN T+ +++ + R+G
Sbjct: 93 DEMLVRDVVSWTGVISGYVRAGLFDEAVGLFLRMD---VEPNAATFVSVLVACGRKGYLS 149
Query: 229 --------DSNAAF--------AFFSRMTAEGFVP------------DLVTWNAMISGFA 260
+AF A G +P D+V+W ++ISG
Sbjct: 150 VGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLV 209
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q EAL+LF+ M SGI+P+ + +T VL A G++ GR +H + R + D+
Sbjct: 210 QCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQ 269
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
G+A++DMY+KCG ++ + +F KNV +WNA++ HG +ELFE M+ G
Sbjct: 270 IGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVG 329
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMK-ERYGVKISKEHYACVVDMLCRSGRMVE 439
MR NEVT +++L+AC H GLV +G + F MK ++Y + EHY C+VD+LCR+ + E
Sbjct: 330 MRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDE 389
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A +L + +PM + GA + C +G +L + + F E+ +V+LSNI A
Sbjct: 390 ALELTKAMPMSPDVRIMGALLSACKENGNTELPQEILDRFVELDSHDSGVYVLLSNIHAI 449
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFVEKEVQNES 542
+ W + +R++MKEK ++K PG + +E K +EF+ + ++
Sbjct: 450 NQRWDDVTRIRRLMKEKGIKKPPGSTVIELDGKAHEFIVGDTRHPQ 495
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 185/403 (45%), Gaps = 19/403 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C K + +G+QVH ++ NI+ +++ LV Y+ C A VFD++
Sbjct: 40 VLKSCAKFVGIGEGRQVHGVIIKMGFVCNIY-VENSLVHFYSVCKRFGDASRVFDEMLVR 98
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V ++ G F EA+G F M N TF VL AC + GK +H
Sbjct: 99 DVVSWTGVISGYVRAGLFDEAVGLFLRMD---VEPNAATFVSVLVACGRKGYLSVGKGIH 155
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ + F + V NAL+DMY KCG L A++VF + E+D+VSWTS+ISG +
Sbjct: 156 GLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPK 215
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
EA+ LF+ M+ G+EP+ +++++ AR G + + + D+ AM+
Sbjct: 216 EALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMV 275
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+A+ ++++F GM + N + G+ G +++ E+ R+G+
Sbjct: 276 DMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEM----VRVGMR 331
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITR------IKNVASWNAMIGCYGKHGMVDSSI 370
+ T A++ CG + + R F + + + M+ + ++D ++
Sbjct: 332 PNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEAL 391
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
EL + M M + + ++LSAC G E EI E
Sbjct: 392 ELTKAM---PMSPDVRIMGALLSACKENGNTELPQEILDRFVE 431
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 170/374 (45%), Gaps = 37/374 (9%)
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR---RGD-------- 229
+ +++SGY + A +++ R+ +G P+ FT+ A++ S A+ G+
Sbjct: 1 PFNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVI 60
Query: 230 -----------SNAAFAFF---------SRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
N+ F+ SR+ E V D+V+W +ISG+ ++ +EA+
Sbjct: 61 IKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAV 120
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
LF M ++PN T VL A G G + +G+ IH L + + + +AL+DMY
Sbjct: 121 GLFLRM---DVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMY 177
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
KCG L A+ +F+ K++ SW ++I + ++ELF+ M G+ + + L
Sbjct: 178 VKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILT 237
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
SVLSAC+ G ++ G + + +R +K + +VDM + G + + + +P
Sbjct: 238 SVLSACARLGALDYGRWVHEHI-DRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMP- 295
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAEN 508
+ A NG +HG + + EE +G+R + F+ + C G +E
Sbjct: 296 HKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQ 355
Query: 509 LRKIMKEKNVQKQP 522
MK + P
Sbjct: 356 YFNWMKGQQYNLPP 369
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 282/517 (54%), Gaps = 45/517 (8%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C + +LR GKQ+HA + N +I + S LV +YA G A+ VF+ + + N
Sbjct: 277 LTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRN- 335
Query: 79 FMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ W V+ S F G F E++ F+ MR + ++F + ++ C +D+ G+Q+H
Sbjct: 336 -NVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLH 394
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ + G V V N+LI MY+KC L SA +F M E+D+VSWTSMI+
Sbjct: 395 SLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMIT--------- 445
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
+Y++ G+ A FF M+ + +++TWNAM+
Sbjct: 446 --------------------------AYSQVGNVAKAREFFDGMSEK----NVITWNAML 475
Query: 257 SGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ Q E + L+++K ML ++P+ VT + + G+ ++G +I ++GL
Sbjct: 476 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 535
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
ID +A+I MYSKCG + +AR +F+ +K++ SWNAMI Y +HGM +IE+F+
Sbjct: 536 IIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDD 595
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
+L+ G + + ++ ++VLS CSH GLV++G F MK + + EH++C+VD+L R+G
Sbjct: 596 ILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAG 655
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
+ EA DL+ +PM T + GA + C IHG +LA + FE+ +++++
Sbjct: 656 HLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAK 715
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
I A G+ ++ +RK+M++K ++K PG+S +E N+
Sbjct: 716 IYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNK 752
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 167/380 (43%), Gaps = 72/380 (18%)
Query: 49 LKSKLVGVYAGCGDVNSAR-LVFDKIPNPNVFMLNWMVMASAFTGNFQEAI--------- 98
L++ L+ Y CG ++ AR L+ I +PNV N M+ A G +A+
Sbjct: 41 LQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPAR 100
Query: 99 ----------GYF-------------SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
GYF S+ R N FT + +K+C L Q+
Sbjct: 101 DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQL 160
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
A+ + ++D V AL+DM+ +CG V
Sbjct: 161 LAMVQKFDSQDDSEVAAALVDMFVRCG-------------------------------AV 189
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
D A LF R+K EP F N+++A Y + + A F M D+V+WN M
Sbjct: 190 DLASRLFVRIK----EPTMFCRNSMLAGYVKTYGVDHALELFDSMPER----DVVSWNMM 241
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+S +QS R EAL + M G++ ++ T T L A S++ G+++HA V R
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLP 301
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
HID + SAL+++Y+K G K+A+ +F +N +W +I + ++G S+ELF +
Sbjct: 302 HIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQ 361
Query: 376 MLEEGMRANEVTLISVLSAC 395
M E M ++ L +++S C
Sbjct: 362 MRAELMTLDQFALATLISGC 381
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 170/379 (44%), Gaps = 63/379 (16%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
F+ L++C + + +H +G + V + N L+ Y CG L ARR+
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRL----- 61
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
+ ++ PN T+N ++ YA+ G + A
Sbjct: 62 -----------------------------LLMDIAHPNVITHNVMLNGYAKLGRLSDAVE 92
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK-PNNVTVTGVLQAG 294
F RM A D+ +WN ++SG+ QS++ +L+ F M SG PN T+ +++
Sbjct: 93 LFGRMPAR----DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSC 148
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
G G + ++ A+V + D +AL+DM+ +CG++ A LF + + N
Sbjct: 149 GALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRN 208
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
+M+ Y K VD ++ELF+ M E + V+ ++SA S G V + L++ M+ +
Sbjct: 209 SMLAGYVKTYGVDHALELFDSMPERDV----VSWNMMVSALSQSGRVREALDMVVDMQSK 264
Query: 415 YGVKISKEHY-----ACVVDMLCRSGRMVEAYDLLRQVPM---YVTNSMAGAF-RNGC-- 463
GV++ Y AC R G+ + A ++R +P YV +++ + ++GC
Sbjct: 265 -GVRLDSTTYTSSLTACARLSSLRWGKQLHA-QVIRNLPHIDPYVASALVELYAKSGCFK 322
Query: 464 -------NIHGRRDLAVTM 475
++H R ++A T+
Sbjct: 323 EAKGVFNSLHDRNNVAWTV 341
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 264/525 (50%), Gaps = 34/525 (6%)
Query: 44 LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSL 103
+N + S L+ +Y G + VF K+ NV ++ G EA+ YFS
Sbjct: 189 INSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSE 248
Query: 104 MREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
M + TF+I LKA + GK +H + GF+ V N L MY+KCG
Sbjct: 249 MWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGK 308
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
R+F M DVVSWT++I+ Y + + AV F+RM+ + PN++T+ A+I++
Sbjct: 309 ADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISA 368
Query: 224 -----YARRGD-----------------SNAAFAFFSR---MTAEGFV------PDLVTW 252
A+ G+ +N+ +S+ + + V D+++W
Sbjct: 369 CANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISW 428
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
+ +I+ ++Q EA M G KPN ++ VL G ++ G+++HA V
Sbjct: 429 STIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLC 488
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
+G+ + SALI MYSKCGS+++A +F +I N+ SW AMI Y +HG +I L
Sbjct: 489 IGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINL 548
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
FE++ G++ + VT I VL+ACSH G+V+ G F M Y + SKEHY C++D+LC
Sbjct: 549 FEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLC 608
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
R+GR+ EA ++R +P Y + + C +HG D E+ + +
Sbjct: 609 RAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIA 668
Query: 493 LSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV---EKRNEFV 534
L+NI AA G W EA ++RK+MK K V K+ G+S V +K N FV
Sbjct: 669 LANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFV 713
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 234/499 (46%), Gaps = 54/499 (10%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF---TGNFQEAIGYF 101
N+ L S+L + G + +R +FDK+ + + ++W + + + + +++ I +
Sbjct: 89 NMLELNSELKQLVKQ-GQLCKSRYMFDKMTHRD--EISWTTLIAGYVNASDSYEALILFS 145
Query: 102 SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC 161
++ + + ++F S+ LKAC ++I G+ +H + + G N V V +ALIDMY K
Sbjct: 146 NMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKV 205
Query: 162 GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL-------------- 207
G + RVF M +R+VVSWT++I+G + EA++ F M +
Sbjct: 206 GKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIAL 265
Query: 208 ---------------------EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
+G + + F N + Y + G ++ F +M +
Sbjct: 266 KASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMK----M 321
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
PD+V+W +I+ + Q E A++ FK M S + PN T V+ A + G +I
Sbjct: 322 PDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQI 381
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE-ITRIKNVASWNAMIGCYGKHGM 365
H V R+GL + ++++ +YSK G LK A +F ITR K++ SW+ +I Y + G
Sbjct: 382 HGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITR-KDIISWSTIIAVYSQGGY 440
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
+ + M EG + NE L SVLS C L+E+G ++ + G+ ++
Sbjct: 441 AKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVL-CIGIDHEAMVHS 499
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA-GAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
++ M + G + EA + M + N ++ A NG HG A+ + E+ +GL
Sbjct: 500 ALISMYSKCGSVEEASKIFNG--MKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGL 557
Query: 485 RKPD--GFVMLSNICAADG 501
KPD F+ + C+ G
Sbjct: 558 -KPDYVTFIGVLTACSHAG 575
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 105/250 (42%), Gaps = 32/250 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C L QGKQVHA +LC + + S L+ +Y+ CG V A +F+ +
Sbjct: 463 LSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMK 522
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N+ M+ A G QEAI F + + + TF VL AC
Sbjct: 523 INNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTAC----------- 571
Query: 135 VHAVATQMGF------ENDVSVGNA------LIDMYSKCGLLCSARRVFHGM--FERDVV 180
HA +GF N+ + + +ID+ + G L A + M + DVV
Sbjct: 572 SHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVV 631
Query: 181 SWTSMISGYCNVS-KVDEAVVLFERMKLEGLEPNQF-TYNAIIASYARRGDSNAAFAFFS 238
W++++ C V VD E +L L+PN T+ A+ YA +G A
Sbjct: 632 -WSTLLRS-CRVHGDVDRGRWTAE--QLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRK 687
Query: 239 RMTAEGFVPD 248
M ++G + +
Sbjct: 688 LMKSKGVIKE 697
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 284/555 (51%), Gaps = 50/555 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCT----NDLNIFSLKSKLVGVYAGCGD-----VNSARLV 69
LL + K +R KQ+HA L +D + S S+ G + G D +N L
Sbjct: 8 LLNSIHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYAFDFLNQTDLH 67
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
+P N ++ A A + + A + + + + +TF +VLKAC L +
Sbjct: 68 VGTLP------YNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGV 121
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
++G+QVH VA +MGF D+ V N+L+ YS CG A RVF M RDVVSWT +ISGY
Sbjct: 122 QEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGY 181
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG----DSNAAFAFFSRMTAEGF 245
DEA+ LF +M + PN T+ +++ + R G + R G
Sbjct: 182 VRTGLFDEAINLFLKMD---VVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGL 238
Query: 246 V-------------------------P--DLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
V P D+V+W ++ISG Q K+ ++L+LF M +S
Sbjct: 239 VVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQIS 298
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G++P+ + +T VL A G++ GR + + R G+ D+ G+AL+DMY+KCG ++ A
Sbjct: 299 GVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMA 358
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+F +N+ +WNA++G HG +++ FE M+ G+R NEVT +++L+AC H
Sbjct: 359 LHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHS 418
Query: 399 GLVEKGLEIFRSM-KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
GLV +G F M + + EHY C++D+LCR+G + EAY +R +P+ + G
Sbjct: 419 GLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWG 478
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
A + C +G +L+ + E+ + +V+LSNI A + W + +R++MK+K
Sbjct: 479 ALLSACKANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKG 538
Query: 518 VQKQPGFSRVEKRNE 532
++K PG S +E E
Sbjct: 539 IRKFPGSSVIEVDGE 553
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/547 (30%), Positives = 280/547 (51%), Gaps = 34/547 (6%)
Query: 19 LLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L C ALR GK++H AL +I + + + +YA CG + A+ V +P
Sbjct: 288 LFRSCAALSALRLGKELHSHALKSAFGSDII-VGTATLDMYAKCGRMADAQKVLSSMPKC 346
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N +++ A + +A+ F L+ + ++ T S L AC + +G+QVH
Sbjct: 347 SLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVH 406
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+A + +++ V NA++DMY KC L A +F M RD VSW ++I+ +
Sbjct: 407 GLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEE 466
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD-------- 248
E + F M +EP+ FTY +++ + A R N +R+ G D
Sbjct: 467 ETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALV 526
Query: 249 -----------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+V+WNA+ISGF+ ++ +A K F ML G+ P+N
Sbjct: 527 DMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNF 586
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T VL ++ +G++IHA + + L DV+ S L+DMYSKCG+++D++ +FE
Sbjct: 587 TYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKA 646
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
++ +WNAM+ Y HG+ + +++LFE M ++ N T +SVL AC+H GLV+KGL
Sbjct: 647 PNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGL 706
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
F M YG+ EHY+C+VD+L RSGR+ EA +L++++P + + C I
Sbjct: 707 HYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKI 766
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
HG ++A ++ + V+LSNI A G W +RK+M+ ++K+PG S
Sbjct: 767 HGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCS 826
Query: 526 RVEKRNE 532
+E ++E
Sbjct: 827 WIELKDE 833
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 229/479 (47%), Gaps = 37/479 (7%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
++ S S + G YA CG+++ AR F ++P +V N ++ G +++I F M
Sbjct: 114 DVVSYNSIISG-YASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEM 172
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
++ + ++VLKAC L + G QVH + + GF+ DV G+AL+ MY+KC L
Sbjct: 173 GRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRL 232
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
+ VF + E++ VSW++MI+G + E + LF+ M+ G+ +Q Y ++ S
Sbjct: 233 DDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSC 292
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLV-------------------------------TWN 253
A S F D++ ++N
Sbjct: 293 AALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYN 352
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA-GGLTGSIQIGREIHALVCR 312
A+I G+A+S R +ALK F+ +L +G+ + +T++G L A + G ++ GR++H L +
Sbjct: 353 AIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLE-GRQVHGLAVK 411
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
++ +A++DMY KC +L +A LF++ ++ SWNA+I ++G + ++
Sbjct: 412 SISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAH 471
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F M+ M ++ T SVL AC+ + G+EI + + G+ A +VDM C
Sbjct: 472 FASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRII-KSGMGFDSFVGAALVDMYC 530
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
+ G M+E D + T A +G ++ + + A EMG+ PD F
Sbjct: 531 KCG-MIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGV-NPDNFT 587
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 156/336 (46%), Gaps = 44/336 (13%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
TFS + + C + GKQ HA GFE V N L+ MY KC L A +VF M
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
+ RDVVS+ S+ISGY + ++D A F M E + ++N++I
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMP----ERDVVSWNSVI------------- 153
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
SGF Q+ +++ +F M G+ + ++ VL+A
Sbjct: 154 ----------------------SGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKAC 191
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
G +G ++H LV + G DV TGSAL+ MY+KC L D+ ++F KN SW+
Sbjct: 192 GALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWS 251
Query: 355 AMI-GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMK 412
AMI GC V+ +ELF+ M G+ ++ S+ +C+ + G E+ ++K
Sbjct: 252 AMIAGCVQNDRNVE-GLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALK 310
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+G I +DM + GRM +A +L +P
Sbjct: 311 SAFGSDIIVG--TATLDMYAKCGRMADAQKVLSSMP 344
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/445 (36%), Positives = 248/445 (55%), Gaps = 34/445 (7%)
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
V+KAC LLD GK++H + ++GFE DV V +L+ MYS+ GL+ AR++F M RD
Sbjct: 3 VVKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD--------- 229
SW +MISGYC EA+ + + M+LEG++ + T +++ A+ GD
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119
Query: 230 -------------SNAAFAFFSRMTAEG--------FVPDLVTWNAMISGFAQSKRENEA 268
SNA +++ + G + D+V+WN +I+G+AQ+ +EA
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIKDVVSWNTLITGYAQNGLASEA 179
Query: 269 LKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
++++ M I PN T +L A G++Q G IH V + L+ DVF G+ LID
Sbjct: 180 IEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLID 239
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MY KCG L DA +LF KN WNAMI CYG HG + ++ELF M E ++ + +T
Sbjct: 240 MYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHIT 299
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
+S+LSACSH GLV F M+E YG+K S +HY C+VD+ R+G + A++ ++++
Sbjct: 300 FVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKM 359
Query: 448 PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAE 507
P+ S GA N C IHG +L E FE+ +V+LSNI A G+W +
Sbjct: 360 PIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVD 419
Query: 508 NLRKIMKEKNVQKQPGFSRVEKRNE 532
++R + +++ ++K PG+S + N+
Sbjct: 420 DVRSLARDRGLRKNPGWSSIILNNK 444
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 181/390 (46%), Gaps = 46/390 (11%)
Query: 29 LRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
L GK++H L+ + ++F + + LV +Y+ G V AR +FD +P + N M+
Sbjct: 10 LLDGKKIHCLVLKLGFEWDVF-VAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMIS 68
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
GN EA+ MR + + T + VL C + DI GK +H + G E
Sbjct: 69 GYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEF 128
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM- 205
++ V NALI+MY+K G L A++VF G+ +DVVSW ++I+GY EA+ ++ M
Sbjct: 129 ELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLME 187
Query: 206 KLEGLEPNQFTYNAIIASYA-----------------------------------RRGDS 230
+ E + PNQ T+ +I+ +Y+ + G
Sbjct: 188 EHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKL 247
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+ A + F ++ + VP WNAMIS + +AL+LF+ M +KP+++T +
Sbjct: 248 DDAISLFYQVPRKNSVP----WNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSL 303
Query: 291 LQAGGLTGSIQIGRE-IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
L A +G + + + + G+ + ++D++ + G L+ A + I+
Sbjct: 304 LSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQP 363
Query: 350 VAS-WNAMIGCYGKHGMVDSSIELFERMLE 378
AS W A++ HG ++ ER+ E
Sbjct: 364 DASAWGALLNACRIHGNIELGKHASERLFE 393
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 161/345 (46%), Gaps = 11/345 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + + GK +H + + L + + L+ +YA G + A+ VF + +
Sbjct: 101 VLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIK-D 159
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKKGKQVH 136
V N ++ A G EAI + LM E N+ T+ +L A + +++G ++H
Sbjct: 160 VVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIH 219
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ +DV VG LIDMY KCG L A +F+ + ++ V W +MIS Y +
Sbjct: 220 GQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGE 279
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAM 255
+A+ LF MK E ++P+ T+ +++++ + G + A F+ M E G P L + M
Sbjct: 280 KALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCM 339
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ F ++ A K M I+P+ +L A + G+I++G+ + +
Sbjct: 340 VDLFGRAGELEMAFNFIKKM---PIQPDASAWGALLNACRIHGNIELGKHASERLFEVDS 396
Query: 316 HIDVFTGSALIDMYSKCGS---LKDARTLFEITRIKNVASWNAMI 357
+V L ++Y+ G + D R+L ++ W+++I
Sbjct: 397 E-NVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSII 440
>gi|334184678|ref|NP_180987.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546770|sp|O64705.2|PP184_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g34400
gi|330253874|gb|AEC08968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 180/558 (32%), Positives = 284/558 (50%), Gaps = 58/558 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL KC+ LRQ Q LL + + F L+ GD N + +F PN
Sbjct: 43 LLKKCISVNQLRQ-IQAQMLLHSVEKPNF-----LIPKAVELGDFNYSSFLFSVTEEPNH 96
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIY---RCNKFTFSIVLKACVGLLDIKKGKQV 135
+ N+M+ T N EA SL R + + +KFT++ V AC L +I G+ V
Sbjct: 97 YSFNYMIRGLTNTWNDHEAA--LSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSV 154
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H+ ++G E DV + ++LI MY+KCG + AR++F + ERD VSW SMISGY
Sbjct: 155 HSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYA 214
Query: 196 DEAVVLFERMKLEGLEPNQ-----------------------------------FTYNAI 220
+A+ LF +M+ EG EP++ F + +
Sbjct: 215 KDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKL 274
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I+ Y + GD ++A F++M + D V W AMI+ ++Q+ + +EA KLF M +G+
Sbjct: 275 ISMYGKCGDLDSARRVFNQMIKK----DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 330
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P+ T++ VL A G G++++G++I + L +++ + L+DMY KCG +++A
Sbjct: 331 SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 390
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+FE +KN A+WNAMI Y G ++ LF+RM + +++T I VLSAC H GL
Sbjct: 391 VFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGL 447
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V +G F M +G+ EHY ++D+L R+G + EA++ + + P M A
Sbjct: 448 VHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAIL 507
Query: 461 NGCNIHGRRDLAVTMG--EEFFEMGLRKPDG-FVMLSNICAADGEWHEAENLRKIMKEKN 517
C H R+D+A+ EM K G +V+ SN+ A W E+ +R +M+++
Sbjct: 508 GAC--HKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRG 565
Query: 518 VQKQPGFSRVEKRNEFVE 535
V K PG S +E E +E
Sbjct: 566 VVKTPGCSWIEIEGELME 583
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 180/560 (32%), Positives = 293/560 (52%), Gaps = 47/560 (8%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVG--VYAGCGDVNSARLV 69
N + LL KC K + + K++H L+ T + ++ L S+LV Y+ G++N A+ V
Sbjct: 6 NSILSLLEKC---KTMAELKRLHGLMITTSVIQDVIPL-SRLVDFCAYSDSGNLNYAKSV 61
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
F++I P++++ N M+ + + + EA+ + MR+ Y + FTF VLKAC +
Sbjct: 62 FNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGY 121
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
G+ VH + GFE DV AL+ MY+ CG + +A +VF + + +VV+WTS+I+G
Sbjct: 122 NLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGC 181
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP-- 247
+ EAV +++ M+L + PN+ T ++ + AR D NA R G P
Sbjct: 182 ISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQ 241
Query: 248 ------------------------------------DLVTWNAMISGFAQSKRENEALKL 271
+LV WN+MI + Q + NEAL L
Sbjct: 242 SNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDL 301
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F M ++G P+ T V+ A G++ G+ +HA V + L D G+AL+DMY+K
Sbjct: 302 FSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAK 361
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE-GMRANEVTLIS 390
G + A+ +F + K+V +W ++I HG + ++ F++M E+ + +E+T I
Sbjct: 362 SGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIG 421
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY 450
VLSACSH G VE G F SMK +G++ + +HY C+VD+L R+GR+ EA L+ ++P+
Sbjct: 422 VLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVE 481
Query: 451 VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR 510
++ A NGC I+ D+A + E+ + +V+LSNI A W E + R
Sbjct: 482 PNTAIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMAR 541
Query: 511 KIMKEKNVQKQPGFSRVEKR 530
++MKE+ +QK G S VE +
Sbjct: 542 ELMKERKIQKSLGHSSVEMK 561
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 287/556 (51%), Gaps = 45/556 (8%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIP---N 75
L C + L +GK++H L N L + L+ +Y+ C ++ + VF+ P N
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFN-FPTHHN 94
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
NVF N ++ Q A+ ++ MR +KFTF V++AC D ++
Sbjct: 95 KNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKI 154
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + ++G E DV VG+AL++ Y K + A RVF + RDVV W +M++G+ + +
Sbjct: 155 HGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRF 214
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN---AAFAFFSRMTAEGFVP----- 247
+EA+ +F RM G+ P ++T +++ ++ GD + A F ++M E V
Sbjct: 215 EEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNAL 274
Query: 248 -----------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSG-IKPN 283
D+ +WN+++S + L+LF M+ S ++P+
Sbjct: 275 IDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPD 334
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGL--------HIDVFTGSALIDMYSKCGSL 335
VTVT VL A ++ GREIH + GL DV +AL+DMY+KCG++
Sbjct: 335 LVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNM 394
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+DAR +F R K+VASWN MI YG HG ++++F RM + M NE++ + +LSAC
Sbjct: 395 RDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSAC 454
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH G+V++GL M+ +YGV S EHY CV+DMLCR+G+++EAYDL+ +P
Sbjct: 455 SHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVG 514
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
+ C +H DLA + E+ +V++SN+ G + E R MK+
Sbjct: 515 WRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVLEWRYTMKQ 574
Query: 516 KNVQKQPGFSRVEKRN 531
+NV+K+PG S +E N
Sbjct: 575 QNVKKRPGCSWIELVN 590
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 119/292 (40%), Gaps = 58/292 (19%)
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T LQ+ ++ G+E+H + + ++LI+MYSKC + + +F
Sbjct: 31 TCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFP 90
Query: 346 --RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS------- 396
KNV ++NA+I + + + ++ L+ +M G+ ++ T V+ AC
Sbjct: 91 THHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFV 150
Query: 397 ----HGGLVEKGLEI--------------FRSMKERYGVKISKE-------HYACVVDML 431
HG + + GLE+ FR + E Y ++ +E + +V+
Sbjct: 151 VTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAY--RVFEELPVRDVVLWNAMVNGF 208
Query: 432 CRSGRMVEAYDLLRQ------VPMYVTN-------SMAGAFRNGCNIHGRRDLAVTMGEE 478
+ GR EA + R+ VP T S+ G F NG +HG MG
Sbjct: 209 AQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHG---FVTKMG-- 263
Query: 479 FFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+E G+ + + + C G +A ++ ++M E ++ V +R
Sbjct: 264 -YESGVVVSNALIDMYGKCKCVG---DALSVFEMMDEIDIFSWNSIMSVHER 311
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 269/496 (54%), Gaps = 40/496 (8%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
+F + + N ++ + G +AI F M++ +R ++FTF+ VL A + + D
Sbjct: 196 LFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDD 255
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
I+ G+QVH+ + F +V V NAL+D YSK + AR++F+ M E D +S+ +I+
Sbjct: 256 IEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITC 315
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------------- 217
+V+E++ LF ++ + QF +
Sbjct: 316 CAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISE 375
Query: 218 ----NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
N+++ YA+ A F+ + + VP W A+ISG+ Q + LKLF
Sbjct: 376 VLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVP----WTALISGYVQKGLHEDGLKLFV 431
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
M + I ++ T +L+A S+ +G+++H+ + R G +VF+GSAL+DMY+KCG
Sbjct: 432 EMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCG 491
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
S+K+A +F+ ++N SWNA+I Y ++G ++ FE+M+ G++ N V+ +S+L
Sbjct: 492 SIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILC 551
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
ACSH GLVE+GL+ F SM + Y ++ +EHYA +VDMLCRSGR EA L+ ++P
Sbjct: 552 ACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDE 611
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEM-GLRKPDGFVMLSNICAADGEWHEAENLRKI 512
M + N C IH ++LA+ ++ F M GLR +V +SNI AA GEW ++K
Sbjct: 612 IMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKA 671
Query: 513 MKEKNVQKQPGFSRVE 528
++E+ ++K P +S VE
Sbjct: 672 LRERGIRKVPAYSWVE 687
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 226/504 (44%), Gaps = 73/504 (14%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEA------------------IGYFS 102
GD+ +AR +FD++P+ NV N M+M +GN A IG ++
Sbjct: 56 GDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYA 115
Query: 103 LMREFIYRCNKF-------------TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
F+ N F T + +L + + QVH ++G+++ +
Sbjct: 116 QHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLM 175
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
V N+L+D Y K L A +F M E+D V++ ++++GY +A+ LF +M+ G
Sbjct: 176 VCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLG 235
Query: 210 LEPNQFTYNAIIASYARRGD----------------------SNAAFAFFS--------- 238
P++FT+ A++ + + D +NA F+S
Sbjct: 236 FRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEAR 295
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
++ E D +++N +I+ A + R E+L+LF+ + + +L +
Sbjct: 296 KLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSL 355
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++++GR+IH+ +V G++L+DMY+KC +A +F ++ W A+I
Sbjct: 356 NLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALIS 415
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
Y + G+ + ++LF M + A+ T S+L AC++ + G ++ S R G
Sbjct: 416 GYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQL-HSRIIRSGCL 474
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT---NSMAGAF-RNGCNIHGRRDLAVT 474
+ + +VDM + G + EA + +++P+ + N++ A+ +NG H R
Sbjct: 475 SNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSF--- 531
Query: 475 MGEEFFEMGLRKPDGFVMLSNICA 498
E+ GL +P+ LS +CA
Sbjct: 532 --EQMIHSGL-QPNSVSFLSILCA 552
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 188/425 (44%), Gaps = 79/425 (18%)
Query: 32 GKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G+QVH+ + C N+F + + L+ Y+ + AR +F ++P + N ++ A
Sbjct: 259 GQQVHSFVVKCNFVWNVF-VANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCA 317
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
+ G +E++ F ++ + +F F+ +L L+++ G+Q+H+ A ++V
Sbjct: 318 WNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVL 377
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF------- 202
VGN+L+DMY+KC A R+F + + V WT++ISGY ++ + LF
Sbjct: 378 VGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAK 437
Query: 203 ----------------------------ERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
R+ G N F+ +A++ YA+ G A
Sbjct: 438 IGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEAL 497
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F M V + V+WNA+IS +AQ+ AL+ F+ M+ SG++PN+V+ +L A
Sbjct: 498 QMFQEMP----VRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCAC 553
Query: 295 GLTGSIQIG----------------REIHA-----------------LVCRMGLHIDVFT 321
G ++ G RE +A L+ RM D
Sbjct: 554 SHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIM 613
Query: 322 GSALID----MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
S++++ ++ ++K A LF + +++ A + +M Y G DS ++ + +
Sbjct: 614 WSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALR 673
Query: 378 EEGMR 382
E G+R
Sbjct: 674 ERGIR 678
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 140/319 (43%), Gaps = 46/319 (14%)
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+ V A + GF+ + N + + + G L +AR++F M ++V+S +MI GY
Sbjct: 27 QHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKS 86
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
+ A LF+ M ++ + T+ +I YA+ AF F+ M G VPD +T
Sbjct: 87 GNLSTARSLFDSM----VQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITL 142
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
++SGF + + NE ++H V +
Sbjct: 143 ATLLSGFTEFESVNEVA-----------------------------------QVHGHVVK 167
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
+G + ++L+D Y K SL A LF+ K+ ++NA++ Y K G +I L
Sbjct: 168 VGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINL 227
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE---RYGVKISKEHYACVVD 429
F +M + G R +E T +VL+A +E G ++ + + + V ++ ++D
Sbjct: 228 FFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVAN----ALLD 283
Query: 430 MLCRSGRMVEAYDLLRQVP 448
+ R+VEA L ++P
Sbjct: 284 FYSKHDRIVEARKLFYEMP 302
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 176/520 (33%), Positives = 276/520 (53%), Gaps = 46/520 (8%)
Query: 30 RQGKQVHALLCTN---DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
+Q Q+ A L TN L+ + KL+G A ++ A+L+F ++PNPNVF N ++
Sbjct: 25 KQLLQIQAQLITNPPLSLHPNLIAVKLIGACAANANLYHAQLIFAQLPNPNVFSWNAIIK 84
Query: 87 ASAFTGNFQEAIGYFS--LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
A G ++ A+ F+ L N++ ++ ++KAC GL I G +VHAV + G
Sbjct: 85 AHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSLIKACAGLEAIADGLKVHAVVIKSGL 144
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+N++ +G +L+DMY K SA +VF M RDVVSW +M+SG
Sbjct: 145 DNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMVSG---------------- 188
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
Y GD +A F +M D+++WNAMI G+ Q+ +
Sbjct: 189 -------------------YCLCGDLESARRVFDQMLER----DVISWNAMIGGYVQNGK 225
Query: 265 ENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
++A+++F M V G+ P++VT+ VL A G++ GR I V G ++++ G+
Sbjct: 226 YSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGN 285
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
ALIDMY+KCG++++AR +F+ R ++V SW+ MI G HG D + + +MLE G++
Sbjct: 286 ALIDMYAKCGTMEEARRIFDGMRERDVISWSTMICGSGTHGDADEAFGYYSKMLECGVKP 345
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
NEVT + +LSACSH GLV+KG+E+F M + Y + HY CV+D+L R+GR+ EA DL
Sbjct: 346 NEVTFMGLLSACSHAGLVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEAEDL 405
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ +P+ + GA GC IH + + E+ +V ++ A+ G
Sbjct: 406 INSMPIEPNVIVWGALLGGCRIHKDFRRGERVAQHLLELDSEYTGSYVYIAGAKASVGRV 465
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE-KEVQNES 542
+A N M+ K + K PG S++E N E KE N S
Sbjct: 466 DDAANCWLRMQHKGIIKDPGCSKIEVHNTVHEFKECDNTS 505
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 180/588 (30%), Positives = 285/588 (48%), Gaps = 65/588 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C KS AL +G QVH + + ++F +++ L+ Y CG+++ R VFDK+
Sbjct: 145 VLSACTKSAALTEGFQVHGAIVKMGFERDMF-VENSLIHFYGECGEIDCMRRVFDKMSER 203
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV ++ A G ++EA+ F M E R N T V+ AC L D++ G+QV
Sbjct: 204 NVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVC 263
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ E + + NAL+DMY KCG + AR++F ++++V + +++S Y
Sbjct: 264 TCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAR 323
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
E + + M G P++ T NAII
Sbjct: 324 EVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAII 383
Query: 222 ASYARRGDSNAAFAFFSRMTAE----------GFV-----------------PDLVTWNA 254
Y + G A F RM + GFV DLV+WN
Sbjct: 384 NMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNT 443
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MI Q EA++LF+ M GI + VT+ GV A G G++ + + IH + +
Sbjct: 444 MIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKD 503
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+H D+ G+AL+DM+++CG + A +F ++V++W A IG G +IELF+
Sbjct: 504 IHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFD 563
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
ML++G++ + V +++L+A SHGGLVE+G IFRSMK+ YG+ HY C+VD+L R+
Sbjct: 564 EMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRA 623
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
G + EA L+ + M + + G+ C +H D+A E E+ + V+LS
Sbjct: 624 GLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLS 683
Query: 495 NICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
NI A+ G W + +R +KEK K PG S +E + E +ES
Sbjct: 684 NIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDES 731
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 147/571 (25%), Positives = 237/571 (41%), Gaps = 84/571 (14%)
Query: 21 GKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNS------ARLVFDKIP 74
G K K + + KQ+H+ + N LN L L + + C ++ + A+ +
Sbjct: 38 GSFKKCKTMTELKQLHSQITKNGLNHHPLS--LTNLISSCTEMGTFESLEYAQKALELFI 95
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC-----NKFTFSIVLKACVGLLDI 129
N M + +S G +GY +++ C + FTF VL AC +
Sbjct: 96 EDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAAL 155
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
+G QVH +MGFE D+ V N+LI Y +CG + RRVF M ER+VVSWTS+I GY
Sbjct: 156 TEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGY 215
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD-------------------- 229
EAV LF M G+ PN T +I++ A+ D
Sbjct: 216 AKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNA 275
Query: 230 --SNAAFAFFSRMTA---------EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
NA + + A E +LV +N ++S + + E L + ML
Sbjct: 276 LMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKH 335
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC------ 332
G +P+ +T+ + A + G+ H V R GL +A+I+MY KC
Sbjct: 336 GPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMA 395
Query: 333 -------------------------GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
G ++ A +F ++ SWN MIG + M
Sbjct: 396 CRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFK 455
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+IELF M EG+ A++VT++ V SAC + G ++ I +K++ + +
Sbjct: 456 EAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKK-DIHFDMHLGTAL 514
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
VDM R G A + ++ ++ A + G A+ + +E + G+ KP
Sbjct: 515 VDMFARCGDPQSAMQVFNKMVKRDVSAWTAAI-GAMAMEGNGTGAIELFDEMLQQGI-KP 572
Query: 488 DGFVMLSNICA------ADGEWHEAENLRKI 512
DG V ++ + A + WH +++ I
Sbjct: 573 DGVVFVALLTALSHGGLVEQGWHIFRSMKDI 603
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/542 (30%), Positives = 273/542 (50%), Gaps = 32/542 (5%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C A + G Q+H +D S+ + + +YA C ++ A VF+ +PNP
Sbjct: 249 CAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSY 308
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
N +++ A +A+ F ++ ++ + S L AC + +G Q+H +A +
Sbjct: 309 NAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVK 368
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
G ++ V N ++DMY KCG L A +F M RD VSW ++I+ + ++ + + L
Sbjct: 369 CGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSL 428
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL------------ 249
F M +EP+ FTY +++ + A + N R+ G D
Sbjct: 429 FVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGK 488
Query: 250 -------------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
V+WN++ISGF+ K+ A + F ML G+ P+N T V
Sbjct: 489 CGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATV 548
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L +I++G++IHA + ++ LH DV+ S L+DMYSKCG+++D+R +FE T ++
Sbjct: 549 LDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDY 608
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+W+AMI Y HG + +I+LFE M ++ N ISVL AC+H G V+KGL F+
Sbjct: 609 VTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQI 668
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M+ YG+ EHY+C+VD+L RS ++ EA L+ + + + + C + G +
Sbjct: 669 MQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVE 728
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+A ++ + +V+L+N+ A G W E +R IMK ++K+PG S +E R
Sbjct: 729 VAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVR 788
Query: 531 NE 532
+E
Sbjct: 789 DE 790
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 157/553 (28%), Positives = 265/553 (47%), Gaps = 84/553 (15%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L KC KAL GKQ HA ++ T+ + + + LV Y ++N A VFD++P+ +
Sbjct: 12 ILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRMPHRD 71
Query: 78 VFMLNWMVMASAFTGNF-------------------------------QEAIGYFSLMRE 106
V N M+ A GN +++I F MR
Sbjct: 72 VISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRS 131
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
+ TFS+VLKAC G+ D G QVH +A QMGFENDV G+AL+DMYSKC L
Sbjct: 132 LKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDG 191
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ------------ 214
A R+F M ER++V W+++I+GY + E + LF+ M G+ +Q
Sbjct: 192 AFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAG 251
Query: 215 ------------------FTYNAIIAS-----YARRGDSNAAFAFFSRMTAEGFVPDLVT 251
F Y++II + YA+ + A+ F+ + P +
Sbjct: 252 LSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPN----PPRQS 307
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
+NA+I G+A+ + +AL++F+ + + + + ++++G L A + G ++H L
Sbjct: 308 YNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAV 367
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
+ GL ++ + ++DMY KCG+L +A T+F+ ++ SWNA+I + ++ + ++
Sbjct: 368 KCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLS 427
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDM 430
LF ML M ++ T SV+ AC+ + G+EI R +K G+ + + +VDM
Sbjct: 428 LFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKS--GMGLDWFVGSALVDM 485
Query: 431 LCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
+ G ++EA +D L + NS+ F + + + A + EMG+ P
Sbjct: 486 YGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSS----QKQSENAQRYFSQMLEMGV-IP 540
Query: 488 DGFVMLS--NICA 498
D F + ++CA
Sbjct: 541 DNFTYATVLDVCA 553
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 154/342 (45%), Gaps = 52/342 (15%)
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
KFTFS +L+ C L + GKQ HA F + V N L+ Y K + A +VF
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
M RDV+SW +MI GY + + A LF+ M E + ++N++++ Y G +
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMP----ERDVVSWNSLLSCYLHNGVNRK 121
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
+ F RM + D T++ ++ SGI+
Sbjct: 122 SIEIFVRMRSLKIPHDYATFSVVLKA------------------CSGIE----------- 152
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
+G ++H L +MG DV TGSAL+DMYSKC L A +F +N+
Sbjct: 153 ------DYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVC 206
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
W+A+I Y ++ ++LF+ ML+ GM ++ T SV +C+ GL F+
Sbjct: 207 WSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCA-------GLSAFKLGT 259
Query: 413 ERYGVKISKEH-YACVV-----DMLCRSGRMVEAYDLLRQVP 448
+ +G + + Y ++ DM + RM +A+ + +P
Sbjct: 260 QLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLP 301
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 7/174 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C + GKQ+HA + LN+ S + S LV +Y+ CG++ +RL+F+K P
Sbjct: 548 VLDVCANMATIELGKQIHAQILK--LNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPK 605
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+ + M+ A A+ G+ ++AI F M+ + N F VL+AC + + KG
Sbjct: 606 RDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHY 665
Query: 136 HAV-ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMIS 187
+ + G + + + ++D+ + + A ++ M FE D V W +++S
Sbjct: 666 FQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLS 719
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 180/549 (32%), Positives = 283/549 (51%), Gaps = 40/549 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C L GKQ+HA + L + SL + L+ Y CG V +A +F+ +P
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 75 NPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
N N+ ++W + S + N +EA+ F+ M +F + + + S +L +C L + G
Sbjct: 312 NKNI--ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFG 369
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
QVHA + ND V N+LIDMY+KC L AR+VF DVV + +MI GY +
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRL 429
Query: 193 S---KVDEAVVLFERMKLEGLEPNQFTYNAII---ASYARRGDSNAAFAFF--------- 237
++ EA+ +F M+ + P+ T+ +++ AS G S
Sbjct: 430 GTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDI 489
Query: 238 ------------------SRMT-AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
SR+ E V DLV WN+M +G+ Q EAL LF + +S
Sbjct: 490 FAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLS 549
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+P+ T ++ A G S+Q+G+E H + + GL + + +AL+DMY+KCGS +DA
Sbjct: 550 RERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDA 609
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
F+ ++V WN++I Y HG ++++ E+M+ EG+ N +T + VLSACSH
Sbjct: 610 HKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHA 669
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLVE GL+ F M R+G++ EHY C+V +L R+GR+ +A +L+ ++P + +
Sbjct: 670 GLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRS 728
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
+GC G +LA E + F MLSNI A+ G W EA+ +R+ MK + V
Sbjct: 729 LLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGV 788
Query: 519 QKQPGFSRV 527
K+PG S +
Sbjct: 789 VKEPGRSWI 797
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 233/502 (46%), Gaps = 68/502 (13%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREF 107
L + L+ +Y+ G + AR VF+K+P N+ + MV A G ++E++ F R
Sbjct: 81 LSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTR 140
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGK----QVHAVATQMGFENDVSVGNALIDMYSKCGL 163
N++ S ++AC GL +G+ Q+ + + GF+ DV VG LID Y K G
Sbjct: 141 KDSPNEYILSSFIQACSGL--DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGN 198
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE--------------- 208
+ AR VF + E+ V+WT+MISG + + ++ LF ++ +
Sbjct: 199 IDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA 258
Query: 209 --------------------GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
GLE + N +I SY + G AA F+ M + +
Sbjct: 259 CSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK----N 314
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
+++W ++SG+ Q+ EA++LF M G+KP+ + +L + ++ G ++HA
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA 374
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM--- 365
+ L D + ++LIDMY+KC L DAR +F+I +V +NAMI Y + G
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWE 434
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL-EIFRSMKERYGVKISKEHY 424
+ ++ +F M +R + +T +S+L A + L GL + + +YG+ +
Sbjct: 435 LHEALNIFRDMRFRLIRPSLLTFVSLLRASA--SLTSLGLSKQIHGLMFKYGLNLDIFAG 492
Query: 425 ACVVDMLC-----RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEF 479
+ ++D+ + R+V +D ++ + + NSM + + A+ + F
Sbjct: 493 SALIDVYSNCYCLKDSRLV--FDEMKVKDLVIWNSMFAGYVQ----QSENEEALNL---F 543
Query: 480 FEMGL--RKPDGFVMLSNICAA 499
E+ L +PD F + + AA
Sbjct: 544 LELQLSRERPDEFTFANMVTAA 565
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 140/298 (46%), Gaps = 38/298 (12%)
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH G E D + N LI++YS+ G + AR+VF M ER++VSW++M+S CN
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA-CNHHG 124
Query: 195 VDEA--VVLFERMKLEGLEPNQFTYNAIIASYA---RRGDSNAAFAFFSRMTAEGFVPDL 249
+ E VV E + PN++ ++ I + + RG F S + GF D+
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW-MVFQLQSFLVKSGFDRDV 183
Query: 250 -------------------------------VTWNAMISGFAQSKRENEALKLFKGMLVS 278
VTW MISG + R +L+LF ++
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+ P+ ++ VL A + ++ G++IHA + R GL +D + LID Y KCG + A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
LF KN+ SW ++ Y ++ + ++ELF M + G++ + S+L++C+
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 14/246 (5%)
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
GLE + + N +I Y+R G A F +M +LV+W+ M+S E+
Sbjct: 74 GLELDTYLSNILINLYSRAGGMVYARKVFEKMPER----NLVSWSTMVSACNHHGIYEES 129
Query: 269 LKLF-KGMLVSGIKPNNVTVTGVLQA-GGLTGSIQIGR----EIHALVCRMGLHIDVFTG 322
L +F + PN ++ +QA GL G GR ++ + + + G DV+ G
Sbjct: 130 LVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR---GRWMVFQLQSFLVKSGFDRDVYVG 186
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+ LID Y K G++ AR +F+ K+ +W MI K G S++LF +++E+ +
Sbjct: 187 TLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV 246
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
+ L +VLSACS +E G +I + RYG+++ ++D + GR++ A+
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHIL-RYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 443 LLRQVP 448
L +P
Sbjct: 306 LFNGMP 311
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 183/581 (31%), Positives = 282/581 (48%), Gaps = 64/581 (11%)
Query: 26 SKALRQGKQVHALLCTNDLN-IFSLKSKLV-GVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+ +L KQVHA + + L+ SL KLV A ++ A VF+ IP P + N
Sbjct: 33 ATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNR 92
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
+ + + ++ + + MR ++F+F +LKA + + +G ++H +A ++G
Sbjct: 93 FLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLG 152
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
F++D V L+ MY+ CG + AR +F MF RDVV+W+ MI GYC ++A++LFE
Sbjct: 153 FDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFE 212
Query: 204 RMKLEGLEPNQ---------------FTY--------------------NAIIASYARRG 228
MK +EP++ +Y +A++ YA G
Sbjct: 213 EMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCG 272
Query: 229 DSNAAFAFFSRMTAEGFVP---------------------------DLVTWNAMISGFAQ 261
+ A F +MT + V DLV W+AMISG+A+
Sbjct: 273 SMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAE 332
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
S EAL LF M GIKP+ VT+ V+ A G++ + IH V + G +
Sbjct: 333 SDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPI 392
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
+ALI+MY+KCGSL+ AR +F+ KNV SW MI + HG S++ F +M +E +
Sbjct: 393 NNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENI 452
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
N +T + VL ACSH GLVE+G +IF SM + + HY C+VD+ R+ + EA
Sbjct: 453 EPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREAL 512
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
+L+ +P+ + G+ C +HG +L + E+ V LSNI A
Sbjct: 513 ELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKAR 572
Query: 502 EWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
W + +RK+MK K + K+ G SR E NE E V + S
Sbjct: 573 RWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRS 613
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 150/321 (46%), Gaps = 36/321 (11%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C ++ L GK +H + N++ + L+S LV +YA CG ++ A +F+K+
Sbjct: 226 LSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMT 285
Query: 75 NPNVF-----------------------------MLNWMVMASAF--TGNFQEAIGYFSL 103
N+ ++ W M S + + + QEA+ F+
Sbjct: 286 PKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNE 345
Query: 104 MREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
M+ + ++ T V+ AC L + + K +H + GF + + NALI+MY+KCG
Sbjct: 346 MQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGS 405
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
L ARR+F M ++V+SWT MIS + A+ F +M+ E +EPN T+ ++ +
Sbjct: 406 LERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYA 465
Query: 224 YARRG-DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+ G F+S + P V + M+ F ++ EAL+L + M + P
Sbjct: 466 CSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAM---PLAP 522
Query: 283 NNVTVTGVLQAGGLTGSIQIG 303
N + ++ A + G I++G
Sbjct: 523 NVIIWGSLMAACRVHGEIELG 543
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 263/512 (51%), Gaps = 31/512 (6%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
S L+ +Y G++ + VFD++P N ++ G + + YFS M
Sbjct: 155 SALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVE 214
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ + ++I LKA + G+ +H + GF+ + V N+L MY+KCG L
Sbjct: 215 YDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHT 274
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII---ASYAR- 226
F M DVVSWT++++ Y + K D + F+RM+ + PN++T++A+I A++AR
Sbjct: 275 FRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARL 334
Query: 227 -RGD-----------------SNAAFAFFSRMTAEGFVP---------DLVTWNAMISGF 259
G+ +N+ +S+ V D++TW+ +I+ +
Sbjct: 335 KWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAY 394
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
+Q EA + M G KPN + VL G ++ G+++HA V +GL
Sbjct: 395 SQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTS 454
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
SALI MY+KCGS+ +A +F + ++ SW AMI Y +HG +IELFE + +
Sbjct: 455 MVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKV 514
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G+R + VT I VL+ACSH G+V+ G F SM + Y + SKEHY C++D+LCR+GR+ +
Sbjct: 515 GLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHD 574
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A L+R +P+ + + C IHG D E ++ + L+NI AA
Sbjct: 575 AETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAA 634
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
G+W EA N+R +MK K V K+PG+S V+ ++
Sbjct: 635 KGKWKEAANIRMLMKSKGVVKEPGWSSVKVKD 666
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 214/477 (44%), Gaps = 45/477 (9%)
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAF--TGNFQEAIGYFSLMR-EFIYRCNKFTFSIV 119
+ AR +FD++P + ++W + S + + + EA+ FS MR + R + F S+
Sbjct: 65 LKDARDLFDQLPQRD--EVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLG 122
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
LK C L+ G +H + + G N V VG+AL+DMY K G + + +VF M R+
Sbjct: 123 LKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNA 182
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
V+WT++I+G + + F M +E + + Y + + A G N + ++
Sbjct: 183 VTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQ 242
Query: 240 MTAEGF-------------------------------VPDLVTWNAMISGFAQSKRENEA 268
+GF D+V+W +++ + Q +E+
Sbjct: 243 TLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCG 302
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L+ FK M S + PN T + V+ ++ G ++HA V +G + ++++ +
Sbjct: 303 LQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTL 362
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
YSKCG L +F + +++ +W+ +I Y + G + + E RM EG + NE L
Sbjct: 363 YSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFAL 422
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC--VVDMLCRSGRMVEAYDLLRQ 446
SVLS C ++E+G ++ + V + + C ++ M + G + EA +
Sbjct: 423 ASVLSVCGSMAILEQGKQLHAHV---LSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMD 479
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNICAADG 501
S A +G HG A+ + E ++GLR PD F+ + C+ G
Sbjct: 480 SWKDDIISWT-AMISGYAEHGHSQEAIELFENIQKVGLR-PDSVTFIGVLTACSHAG 534
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 195/415 (46%), Gaps = 56/415 (13%)
Query: 26 SKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
S AL G+ +H D N F + + L +Y CG ++ F K+ +V ++W
Sbjct: 230 SGALNHGRSIHTQTLKKGFDENSF-VANSLTTMYNKCGKLDYGLHTFRKMRTLDV--VSW 286
Query: 84 MVMASAFTGNFQEAIGY--FSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
+ +A+ +E G F MR N++TFS V+ C +K G+Q+HA
Sbjct: 287 TTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLC 346
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
+GF N +SV N+++ +YSKCG L S +VF M RD+++W+++I+ Y V +EA
Sbjct: 347 VGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEY 406
Query: 202 FERMKLEGLEPNQFTY-----------------------------------NAIIASYAR 226
RM+ EG +PN+F +A+I YA+
Sbjct: 407 LSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAK 466
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G + A S++ + + D+++W AMISG+A+ EA++LF+ + G++P++VT
Sbjct: 467 CG----SIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVT 522
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG--SALIDMYSKCGSLKDARTLFEI 344
GVL A G + +G + + HI +ID+ + G L DA TL
Sbjct: 523 FIGVLTACSHAGMVDLGFYYFNSMSK-DYHITPSKEHYGCMIDLLCRAGRLHDAETLIRS 581
Query: 345 TRIK-NVASWNAMIGCYGKHGMVD----SSIELFERMLEEGMRANEVTLISVLSA 394
I+ + W+ ++ HG VD ++ E+ + L+ +TL ++ +A
Sbjct: 582 MPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLK--LDPNCAGTHITLANIFAA 634
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 173/335 (51%), Gaps = 16/335 (4%)
Query: 23 CMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C L+ G+Q+HA +LC +N S+ + ++ +Y+ CG++ S VF + ++
Sbjct: 328 CANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITW 387
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
+ ++ A + G +EA Y S MR + N+F + VL C + +++GKQ+HA
Sbjct: 388 STIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLS 447
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
+G E V +ALI MY+KCG + A ++F ++ D++SWT+MISGY EA+ L
Sbjct: 448 VGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIEL 507
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFA 260
FE ++ GL P+ T+ ++ + + G + F +F+ M+ + + P + MI
Sbjct: 508 FENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLC 567
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM-----GL 315
++ R ++A L + M I+ ++V + +L+A + G + G+ A V ++ G
Sbjct: 568 RAGRLHDAETLIRSM---PIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGT 624
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
HI L ++++ G K+A + + + K V
Sbjct: 625 HI------TLANIFAAKGKWKEAANIRMLMKSKGV 653
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 132/297 (44%), Gaps = 40/297 (13%)
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D++ N + + K L AR +F + +RD VSWT++ISGY N S EA+ LF +M+
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 207 LE------------------------------------GLEPNQFTYNAIIASYARRGDS 230
L+ GL + F +A++ Y + G+
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEI 167
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+ F M + VTW A+I+G ++ L F GM S ++ ++
Sbjct: 168 GRSCKVFDEMPTR----NAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIA 223
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L+A +G++ GR IH + G + F ++L MY+KCG L F R +V
Sbjct: 224 LKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDV 283
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
SW ++ Y + G D ++ F+RM + NE T +V+S C++ ++ G ++
Sbjct: 284 VSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQL 340
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 21/183 (11%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIP 74
L +L C L QGKQ+HA + + L S+ S L+ +YA CG + A +F
Sbjct: 422 LASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSW 481
Query: 75 NPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDI- 129
++ ++W M S + G+ QEAI F +++ R + TF VL AC G++D+
Sbjct: 482 KDDI--ISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLG 539
Query: 130 -----KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWT 183
K H ++ + +ID+ + G L A + M + D V W+
Sbjct: 540 FYYFNSMSKDYHITPSKEHY-------GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWS 592
Query: 184 SMI 186
+++
Sbjct: 593 TLL 595
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 263/512 (51%), Gaps = 31/512 (6%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
S L+ +Y G++ + VFD++P N ++ G + + YFS M
Sbjct: 155 SALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVE 214
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ + ++I LKA + G+ +H + GF+ + V N+L MY+KCG L
Sbjct: 215 YDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHT 274
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII---ASYAR- 226
F M DVVSWT++++ Y + K D + F+RM+ + PN++T++A+I A++AR
Sbjct: 275 FRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARL 334
Query: 227 -RGD-----------------SNAAFAFFSRMTAEGFVP---------DLVTWNAMISGF 259
G+ +N+ +S+ V D++TW+ +I+ +
Sbjct: 335 KWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAY 394
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
+Q EA + M G KPN + VL G ++ G+++HA V +GL
Sbjct: 395 SQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTS 454
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
SALI MY+KCGS+ +A +F + ++ SW AMI Y +HG +IELFE + +
Sbjct: 455 MVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKV 514
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G+R + VT I VL+ACSH G+V+ G F SM + Y + SKEHY C++D+LCR+GR+ +
Sbjct: 515 GLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHD 574
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A L+R +P+ + + C IHG D E ++ + L+NI AA
Sbjct: 575 AETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAA 634
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
G+W EA N+R +MK K V K+PG+S V+ ++
Sbjct: 635 KGKWKEAANIRMLMKSKGVVKEPGWSSVKVKD 666
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 214/477 (44%), Gaps = 45/477 (9%)
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAF--TGNFQEAIGYFSLMR-EFIYRCNKFTFSIV 119
+ AR +FD++P + ++W + S + + + EA+ FS MR + R + F S+
Sbjct: 65 LKDARDLFDQLPQRD--EVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLG 122
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
LK C L+ G +H + + G N V VG+AL+DMY K G + + +VF M R+
Sbjct: 123 LKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNA 182
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
V+WT++I+G + + F M +E + + Y + + A G N + ++
Sbjct: 183 VTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQ 242
Query: 240 MTAEGF-------------------------------VPDLVTWNAMISGFAQSKRENEA 268
+GF D+V+W +++ + Q +E+
Sbjct: 243 TLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCG 302
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L+ FK M S + PN T + V+ ++ G ++HA V +G + ++++ +
Sbjct: 303 LQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTL 362
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
YSKCG L +F + +++ +W+ +I Y + G + + E RM EG + NE L
Sbjct: 363 YSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFAL 422
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC--VVDMLCRSGRMVEAYDLLRQ 446
SVLS C ++E+G ++ + V + + C ++ M + G + EA +
Sbjct: 423 ASVLSVCGSMAILEQGKQLHAHV---LSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMD 479
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNICAADG 501
S A +G HG A+ + E ++GLR PD F+ + C+ G
Sbjct: 480 SWKDDIISWT-AMISGYAEHGHSQEAIELFENIQKVGLR-PDSVTFIGVLTACSHAG 534
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 195/415 (46%), Gaps = 56/415 (13%)
Query: 26 SKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
S AL G+ +H D N F + + L +Y CG ++ F K+ +V ++W
Sbjct: 230 SGALNHGRSIHTQTLKKGFDENSF-VANSLTTMYNKCGKLDYGLHTFRKMRTLDV--VSW 286
Query: 84 MVMASAFTGNFQEAIGY--FSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
+ +A+ +E G F MR N++TFS V+ C +K G+Q+HA
Sbjct: 287 TTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLC 346
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
+GF N +SV N+++ +YSKCG L S +VF M RD+++W+++I+ Y V +EA
Sbjct: 347 VGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEY 406
Query: 202 FERMKLEGLEPNQFTY-----------------------------------NAIIASYAR 226
RM+ EG +PN+F +A+I YA+
Sbjct: 407 LSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAK 466
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G + A S++ + + D+++W AMISG+A+ EA++LF+ + G++P++VT
Sbjct: 467 CG----SIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVT 522
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG--SALIDMYSKCGSLKDARTLFEI 344
GVL A G + +G + + HI +ID+ + G L DA TL
Sbjct: 523 FIGVLTACSHAGMVDLGFYYFNSMSK-DYHITPSKEHYGCMIDLLCRAGRLHDAETLIRS 581
Query: 345 TRIK-NVASWNAMIGCYGKHGMVD----SSIELFERMLEEGMRANEVTLISVLSA 394
I+ + W+ ++ HG VD ++ E+ + L+ +TL ++ +A
Sbjct: 582 MPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLK--LDPNCAGTHITLANIFAA 634
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 173/335 (51%), Gaps = 16/335 (4%)
Query: 23 CMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C L+ G+Q+HA +LC +N S+ + ++ +Y+ CG++ S VF + ++
Sbjct: 328 CANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITW 387
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
+ ++ A + G +EA Y S MR + N+F + VL C + +++GKQ+HA
Sbjct: 388 STIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLS 447
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
+G E V +ALI MY+KCG + A ++F ++ D++SWT+MISGY EA+ L
Sbjct: 448 VGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIEL 507
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFA 260
FE ++ GL P+ T+ ++ + + G + F +F+ M+ + + P + MI
Sbjct: 508 FENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLC 567
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM-----GL 315
++ R ++A L + M I+ ++V + +L+A + G + G+ A V ++ G
Sbjct: 568 RAGRLHDAETLIRSM---PIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGT 624
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
HI L ++++ G K+A + + + K V
Sbjct: 625 HI------TLANIFAAKGKWKEAANIRMLMKSKGV 653
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 132/297 (44%), Gaps = 40/297 (13%)
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D++ N + + K L AR +F + +RD VSWT++ISGY N S EA+ LF +M+
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 207 LE------------------------------------GLEPNQFTYNAIIASYARRGDS 230
L+ GL + F +A++ Y + G+
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEI 167
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+ F M + VTW A+I+G ++ L F GM S ++ ++
Sbjct: 168 GRSCKVFDEMPTR----NAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIA 223
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L+A +G++ GR IH + G + F ++L MY+KCG L F R +V
Sbjct: 224 LKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDV 283
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
SW ++ Y + G D ++ F+RM + NE T +V+S C++ ++ G ++
Sbjct: 284 VSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQL 340
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 21/183 (11%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIP 74
L +L C L QGKQ+HA + + L S+ S L+ +YA CG + A +F
Sbjct: 422 LASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSW 481
Query: 75 NPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDI- 129
++ ++W M S + G+ QEAI F +++ R + TF VL AC G++D+
Sbjct: 482 KDDI--ISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLG 539
Query: 130 -----KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWT 183
K H ++ + +ID+ + G L A + M + D V W+
Sbjct: 540 FYYFNSMSKDYHITPSKEHY-------GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWS 592
Query: 184 SMI 186
+++
Sbjct: 593 TLL 595
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 286/553 (51%), Gaps = 49/553 (8%)
Query: 20 LGKCMKSKALRQGKQVHALLCTND---LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L C + L GK +H ND ++F + S LV +Y+ CG + A VF++ P
Sbjct: 110 LKACAGLRMLELGKVIHGFAKKNDEIGSDMF-VGSALVELYSKCGQMGEALKVFEEFQRP 168
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC---NKFTFSIVLKACVGLLDIKKGK 133
+ + MV + +EA+ FS M + C + T V+ AC LL++K G
Sbjct: 169 DTVLWTSMVTGYQQNNDPEEALALFSQM--VMMDCVVLDPVTLVSVVSACAQLLNVKAGS 226
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH + + F+ D+ + N+L+++Y+K G A +F M E+DV+SW++MI+ Y N
Sbjct: 227 CVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNE 286
Query: 194 KVDEAVVLFERMKLEGLEPNQFTY-----------------------------------N 218
+EA+ LF M + EPN T
Sbjct: 287 AANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVST 346
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+I Y + + A F R+ + D+V+W A++SG+AQ+ +++ +F+ ML
Sbjct: 347 ALIDMYMKCSCPDEAVDLFQRLPKK----DVVSWVALLSGYAQNGMAYKSMGVFRNMLSD 402
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
GI+P+ V V +L A G Q +H V R G + +VF G++LI++YSKCGSL DA
Sbjct: 403 GIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDA 462
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSH 397
LF+ +++V W++MI YG HG ++E+F++M++ +R N VT +S+LSACSH
Sbjct: 463 VKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSH 522
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
GLVE+GL+IF M Y ++ EH+ +VD+L R G++ +A D++ ++P+ + G
Sbjct: 523 AGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWG 582
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
A C IH ++ + F + +++LSNI A DG+W LR +KE+
Sbjct: 583 ALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERG 642
Query: 518 VQKQPGFSRVEKR 530
++K G S VE R
Sbjct: 643 LKKMFGQSMVEVR 655
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/435 (33%), Positives = 221/435 (50%), Gaps = 39/435 (8%)
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
K+ HA G + D + MY + +A VF + W MI G+
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYN---------------------------------- 218
+ ++ L+ +M +GL+P++F +
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 219 -AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
A++ YA+ GD AA F +M V DLV+W +MISG+A + +E L F M
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMA----VRDLVSWTSMISGYAHNGYNSETLGFFDLMRS 912
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
SG+ PN V++ VL A G G+++ G H+ V + G D+ +A++DMYSKCGSL
Sbjct: 913 SGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDL 972
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
AR LF+ T K++ W+AMI YG HG +I+LF++M++ G+R + VT VLSACSH
Sbjct: 973 ARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSH 1032
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
GL+E+G F+ M E + + +YAC+VD+L R+G++ EA DL+ +P+ S+ G
Sbjct: 1033 SGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWG 1092
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
+ C IH DLA + + F + V+LSNI AA W+E E +RK+M +
Sbjct: 1093 SLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRG 1152
Query: 518 VQKQPGFSRVEKRNE 532
K GFS VE N+
Sbjct: 1153 ANKIQGFSLVEYDNQ 1167
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 146/511 (28%), Positives = 252/511 (49%), Gaps = 51/511 (9%)
Query: 30 RQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
R Q+H+ + T L+ +KL +YA C + +AR VFD+ P+PNV + N + +
Sbjct: 18 RSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSY 77
Query: 89 AFTGNFQEAIGYFSLMREFIYRC-NKFTFSIVLKACVGLLDIKKGKQVHAVATQMG-FEN 146
++E + F LM + FT I LKAC GL ++ GK +H A + +
Sbjct: 78 CREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGS 137
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D+ VG+AL+++YSKCG + A +VF D V WTSM++GY + +EA+ LF +M
Sbjct: 138 DMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMV 197
Query: 207 LEG---LEPNQFT---------------------------------YNAIIASYARRGDS 230
+ L+P N+++ YA+ G
Sbjct: 198 MMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCE 257
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
A FS+M + D+++W+ MI+ +A ++ NEAL LF M+ +PN+VTV
Sbjct: 258 KIAANLFSKMPEK----DVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSA 313
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
LQA ++ +++ G++IH + G +D +ALIDMY KC +A LF+ K+V
Sbjct: 314 LQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDV 373
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SW A++ Y ++GM S+ +F ML +G++ + V ++ +L+A S G+ ++ L
Sbjct: 374 VSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQAL-CLHG 432
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV---PMYVTNSMAGAFRNGCNIHG 467
R G + A ++++ + G + +A L + + + + +SM A+ IHG
Sbjct: 433 YVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAY----GIHG 488
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
R A+ + ++ + +P+ LS + A
Sbjct: 489 RGGEALEIFDQMVKNSTVRPNNVTFLSILSA 519
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 204/424 (48%), Gaps = 48/424 (11%)
Query: 33 KQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT 91
K+ HA + L S + +K +Y +++A +VF+ IPNP F+ N M+ A
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G F ++ +S M E + +KF F LK+C GL D+++GK +H G ND+ V
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
AL+DMY+KCG + +AR VF M RD+VSWTSMISGY + E + F+ M+ G+
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916
Query: 212 PNQ------------------------------FTYNAIIAS-----YARRGDSNAAFAF 236
PN+ F ++ ++A+ Y++ G + A
Sbjct: 917 PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F + DLV W+AMI+ + +A+ LF M+ +G++P++VT T VL A
Sbjct: 977 FDETAGK----DLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSH 1032
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSA-LIDMYSKCGSLKDARTLFEITRIKNVAS-WN 354
+G ++ G+ L+ + + A ++D+ + G L +A L E ++ AS W
Sbjct: 1033 SGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWG 1092
Query: 355 AMIGCYGKHGMVDSSIELFERM--LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
+++G H +D + ++ + + L+ V L ++ +A S VEK R M
Sbjct: 1093 SLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEK----VRKMM 1148
Query: 413 ERYG 416
R G
Sbjct: 1149 ARRG 1152
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 172/379 (45%), Gaps = 43/379 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C + ++ G VH L+ + + L + L+ +YA G A +F K+P +
Sbjct: 212 VVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKD 271
Query: 78 VFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
V ++W M + + N EA+ F M E + N T L+AC ++++GK++
Sbjct: 272 V--ISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKI 329
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H +A GFE D SV ALIDMY KC A +F + ++DVVSW +++SGY
Sbjct: 330 HKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMA 389
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF---------- 245
+++ +F M +G++P+ I+A+ + G A + GF
Sbjct: 390 YKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASL 449
Query: 246 ---------------------VPDLVTWNAMISGFAQSKRENEALKLFKGMLV-SGIKPN 283
V D+V W++MI+ + R EAL++F M+ S ++PN
Sbjct: 450 IELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPN 509
Query: 284 NVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
NVT +L A G ++ G +I +V L D ++D+ + G L A +
Sbjct: 510 NVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDI- 568
Query: 343 EITRIKNVAS---WNAMIG 358
I R+ A W A++G
Sbjct: 569 -INRMPIPAGPHVWGALLG 586
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 165/542 (30%), Positives = 272/542 (50%), Gaps = 32/542 (5%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C A + G Q+H +D S+ + + +YA C + A VF+ +PNP
Sbjct: 249 CAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSY 308
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
N +++ A +A+ F ++ ++ + S L AC + +G Q+H +A +
Sbjct: 309 NAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVK 368
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
G ++ V N ++DMY KCG L A +F M RD VSW ++I+ + ++ + + L
Sbjct: 369 CGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSL 428
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL------------ 249
F M +EP+ FTY +++ + A + N R+ G D
Sbjct: 429 FVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGK 488
Query: 250 -------------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
V+WN++ISGF+ K+ A + F ML GI P+N T V
Sbjct: 489 CGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATV 548
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L +I++G++IHA + ++ LH DV+ S L+DMYSKCG+++D+R +FE ++
Sbjct: 549 LDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDY 608
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+W+AMI Y HG+ + +I LFE M ++ N ISVL AC+H G V+KGL F+
Sbjct: 609 VTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQK 668
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M YG+ EHY+C+VD+L RSG++ EA L+ +P + + + C + G +
Sbjct: 669 MLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVE 728
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+A ++ + +V+L+N+ A G W E +R IMK ++K+PG S +E R
Sbjct: 729 VAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVR 788
Query: 531 NE 532
+E
Sbjct: 789 DE 790
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 155/558 (27%), Positives = 261/558 (46%), Gaps = 73/558 (13%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHA----------LLCTNDLNIFSLKSK---- 52
P L+ +++ L KC KAL GKQVH + N L F KS
Sbjct: 3 PTKKLTFSHI---LQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNY 59
Query: 53 ------------------LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNF 94
L+ YAG G++ A+ +FD +P +V N ++ G
Sbjct: 60 AFKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVN 119
Query: 95 QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNAL 154
+++I F MR + TF+++LKAC G+ D G QVH +A QMGFENDV G+AL
Sbjct: 120 RKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSAL 179
Query: 155 IDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ 214
+DMYSKC L A RVF M ER++V W+++I+GY + E + LF+ M G+ +Q
Sbjct: 180 VDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQ 239
Query: 215 FTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFV----------------------- 246
TY ++ S A + G A S + +
Sbjct: 240 STYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNT 299
Query: 247 ---PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
P ++NA+I G+A+ + +AL +F+ + + + + ++++G L A + G
Sbjct: 300 LPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEG 359
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
++H L + GL ++ + ++DMY KCG+L +A +FE ++ SWNA+I + ++
Sbjct: 360 IQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQN 419
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKE 422
+ ++ LF ML M ++ T SV+ AC+ + G EI R +K G+ +
Sbjct: 420 EEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKS--GMGLDWF 477
Query: 423 HYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM 482
+ +VDM + G ++EA + ++ T S + +G + + + A + EM
Sbjct: 478 VGSALVDMYGKCGMLMEAEKIHARLEEKTTVSW-NSIISGFSSQKQSENAQRYFSQMLEM 536
Query: 483 GLRKPDGFVMLS--NICA 498
G+ PD + + ++CA
Sbjct: 537 GI-IPDNYTYATVLDVCA 553
>gi|3128231|gb|AAC26711.1| hypothetical protein [Arabidopsis thaliana]
gi|20197159|gb|AAM14947.1| hypothetical protein [Arabidopsis thaliana]
Length = 617
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 180/558 (32%), Positives = 284/558 (50%), Gaps = 58/558 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL KC+ LRQ Q LL + + F L+ GD N + +F PN
Sbjct: 39 LLKKCISVNQLRQ-IQAQMLLHSVEKPNF-----LIPKAVELGDFNYSSFLFSVTEEPNH 92
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIY---RCNKFTFSIVLKACVGLLDIKKGKQV 135
+ N+M+ T N EA SL R + + +KFT++ V AC L +I G+ V
Sbjct: 93 YSFNYMIRGLTNTWNDHEAA--LSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSV 150
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H+ ++G E DV + ++LI MY+KCG + AR++F + ERD VSW SMISGY
Sbjct: 151 HSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYA 210
Query: 196 DEAVVLFERMKLEGLEPNQ-----------------------------------FTYNAI 220
+A+ LF +M+ EG EP++ F + +
Sbjct: 211 KDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKL 270
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I+ Y + GD ++A F++M + D V W AMI+ ++Q+ + +EA KLF M +G+
Sbjct: 271 ISMYGKCGDLDSARRVFNQMIKK----DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 326
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P+ T++ VL A G G++++G++I + L +++ + L+DMY KCG +++A
Sbjct: 327 SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 386
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+FE +KN A+WNAMI Y G ++ LF+RM + +++T I VLSAC H GL
Sbjct: 387 VFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGL 443
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V +G F M +G+ EHY ++D+L R+G + EA++ + + P M A
Sbjct: 444 VHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAIL 503
Query: 461 NGCNIHGRRDLAV--TMGEEFFEMGLRKPDG-FVMLSNICAADGEWHEAENLRKIMKEKN 517
C H R+D+A+ EM K G +V+ SN+ A W E+ +R +M+++
Sbjct: 504 GAC--HKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRG 561
Query: 518 VQKQPGFSRVEKRNEFVE 535
V K PG S +E E +E
Sbjct: 562 VVKTPGCSWIEIEGELME 579
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 307/612 (50%), Gaps = 102/612 (16%)
Query: 19 LLGKCMKSK-ALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C+K K + + VHA + + N ++++L+ YA CG + R +FDK+P
Sbjct: 25 LLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQR 84
Query: 77 NVFMLN-----------------------------WMVMASAFTGN--FQEAIGYFSLMR 105
NVF N W M S F + +EA+ YF++M
Sbjct: 85 NVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMH 144
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
+ + N++TF+ L AC GL D+ +G Q+H++ + +DV +G+AL+DMYSKCG +
Sbjct: 145 KEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVN 204
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-- 223
A++VF M +R+VVSW S+I+ Y EA+ +F+ M +EP++ T ++I++
Sbjct: 205 DAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACA 264
Query: 224 -----------YAR-------RGD---SNA---AFAFFSRMTAEGFVPD----------- 248
+AR R D SNA +A SR+ F+ D
Sbjct: 265 SLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 249 --------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+V+WNA+I+G+ Q+ EAL LF + + P
Sbjct: 325 SMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCP 384
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI------DVFTGSALIDMYSKCGSLK 336
+ T +L+A + +G + H V + G D+F G++LIDMY KCG ++
Sbjct: 385 THYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVE 444
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
+ +F ++ SWNAMI + ++G + ++ELF ML+ G + + +T+I VLSAC
Sbjct: 445 EGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACG 504
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
H G VE+G F SM +GV ++HY C+VD+L R+G + EA ++ ++P+ + +
Sbjct: 505 HAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIW 564
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
G+ C +H L + E+ FE+ +V+LSN+ A G+W +A N+RK+M+++
Sbjct: 565 GSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKE 624
Query: 517 NVQKQPGFSRVE 528
V KQPG S ++
Sbjct: 625 GVTKQPGCSWIK 636
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 175/370 (47%), Gaps = 51/370 (13%)
Query: 116 FSIVLKACVGL-LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
F+ +L +C+ L L + VHA + GF N+V + N LID Y+KCG L R++F M
Sbjct: 22 FAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKM 81
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
+R+V FT+N+++ + G + A
Sbjct: 82 PQRNV-----------------------------------FTWNSVVTGLTKLGFLDEAD 106
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
+ F M D TWN+M+SGFAQ R EAL F M G N T L A
Sbjct: 107 SLFRSMPER----DQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSAC 162
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
+ G +IH+L+ + DV+ GSAL+DMYSKCG++ DA+ +F+ +NV SWN
Sbjct: 163 SGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWN 222
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM--- 411
++I CY ++G ++++F+ MLE + +EVTL SV+SAC+ ++ G E+ +
Sbjct: 223 SLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKM 282
Query: 412 -KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM---YVTNSMAGAFRNGCNIHG 467
K R + +S VDM + R+ EA + +P+ SM + +
Sbjct: 283 DKLRNDIILSN----AFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKA 338
Query: 468 RRDLAVTMGE 477
R + M E
Sbjct: 339 ARLMFTKMAE 348
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 269/538 (50%), Gaps = 61/538 (11%)
Query: 52 KLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE----- 106
KLV YA CGD+ R VFD + NV++ N+MV A G+F+E+I F +M E
Sbjct: 1 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 60
Query: 107 ---------FIYRCNKFTFSI-------------------------------------VL 120
F C++ S VL
Sbjct: 61 KRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 120
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
C + GK VH++A + FE ++ N L+DMYSKCG L A RVF M ER+VV
Sbjct: 121 VGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 180
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
SWTSMI+GY D A++L ++M+ EG++ + +I+ + AR G + +
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 241 TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI----------KPNNVTVTGV 290
A +L NA++ +A+ A +F M+V I KP++ T+ +
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACI 300
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A +++ G+EIH + R G D +AL+D+Y KCG L AR LF++ K++
Sbjct: 301 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL 360
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SW MI YG HG + +I F M + G+ +EV+ IS+L ACSH GL+E+G F
Sbjct: 361 VSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYI 420
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
MK + ++ EHYAC+VD+L R+G + +AY + +P+ ++ GA GC I+ +
Sbjct: 421 MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIE 480
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
LA + E FE+ +V+L+NI A +W E + +R+ + +K ++K PG S +E
Sbjct: 481 LAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIE 538
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 193/425 (45%), Gaps = 34/425 (8%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C KS L GK VH+L + + + L+ +Y+ CGD++ A VF+K+ NV +
Sbjct: 123 CAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV--V 180
Query: 82 NWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
+W M + +T G AI M + + + + +L AC + GK VH
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI------------- 186
+++ V NAL+DMY+KCG + A VF M +D++SW +M+
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACI 300
Query: 187 -SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
++S ++ + + G ++ NA++ Y + G A F + ++
Sbjct: 301 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK-- 358
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-R 304
DLV+W MI+G+ NEA+ F M +GI+P+ V+ +L A +G ++ G R
Sbjct: 359 --DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 416
Query: 305 EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS-WNAMI-GCYGK 362
+ + + + + ++D+ S+ G+L A E I A+ W A++ GC
Sbjct: 417 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 476
Query: 363 HGMVDSSIELFERMLEEGMRAN-EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
H IEL E++ E E T VL A + EK E+ R M+E+ G K +
Sbjct: 477 H-----DIELAEKVAERVFELEPENTGYYVLLANIYAE-AEKWEEVKR-MREKIGKKGLR 529
Query: 422 EHYAC 426
++ C
Sbjct: 530 KNPGC 534
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C AL +GK++H + N + + + LV +Y CG + ARL+FD IP+
Sbjct: 299 CILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 358
Query: 77 NVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKG 132
+ +++W VM + + G EAI F+ MR+ ++ +F +L AC GLL+ +
Sbjct: 359 D--LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLE-QGW 415
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
+ + + E + ++D+ S+ G L A + + D W +++ G
Sbjct: 416 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRI 475
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
++ A + ER + LEP Y ++A+
Sbjct: 476 YHDIELAEKVAER--VFELEPENTGYYVLLAN 505
>gi|242095158|ref|XP_002438069.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
gi|241916292|gb|EER89436.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
Length = 563
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 174/551 (31%), Positives = 287/551 (52%), Gaps = 46/551 (8%)
Query: 19 LLGKCMKSKALRQGKQVHA---LLCTNDL---NIFSLKSKLVGVYAGCGDVNSARLVFDK 72
LL C+ + A RQGK VH + ++D ++ L +KLV Y+ GDV +AR VFD
Sbjct: 17 LLQSCIGANAFRQGKSVHHRAIITASSDPSPPDLLHLSTKLVMFYSHFGDVAAARAVFDG 76
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+P+ +V MV A G EA+ F+LM R N+FTF +AC G + G
Sbjct: 77 MPHRSVVSWTAMVSGYAKNGRAPEALELFALMLRSGARPNQFTFGSAARACAGGRCARSG 136
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+QVHA A + D+ V +AL+DM+ +CG + ARR+F M +D+VSW +++ G+
Sbjct: 137 EQVHACAAKGRHAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNALMRGFVER 196
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYN---------------------------------- 218
+A+ LF M +G+ P+ FT+
Sbjct: 197 GHYSDALGLFASMLRDGMLPDHFTFGSALKACGAISVIFNVELIHTCIIKLGYWDEKVAT 256
Query: 219 -AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE-ALKLFKGML 276
++I SYA+ ++A + + PDLV+ A+IS + + +E A+KLF +
Sbjct: 257 ASLIDSYAKCRSLSSARVIYDSICE----PDLVSSTALISDHSMDRNYSEDAMKLFCKIH 312
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
G++ + + ++ +L SI+ G +IHA + + D+ +AL+DMY+K G
Sbjct: 313 REGLRIDGILLSALLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEYL 372
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
D+R F+ +NV SW ++I +HG + ++ LF RM E+G++ N+VT +S+LSACS
Sbjct: 373 DSRRAFDEMPSRNVISWTSLITACAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACS 432
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
H G++ KG+E F SM +YG+ +HY+ +D+L R G++ +A+ LL++ +SM
Sbjct: 433 HSGMMNKGMEYFTSMMNKYGIDPRAKHYSSAIDLLARGGQLEDAWMLLQKTNTECKSSMY 492
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
GA C +HG L T F + + + +L+N+ A W +A+ RK++ E
Sbjct: 493 GAMLGACKVHGNIPLGETAANNLFSIDPKSSVNYAVLANMYAESCLWEDAQRTRKLLAET 552
Query: 517 NVQKQPGFSRV 527
+ K+ GFS +
Sbjct: 553 SKGKEVGFSVI 563
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 199/427 (46%), Gaps = 46/427 (10%)
Query: 116 FSIVLKACVGLLDIKKGKQVH-----AVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+S +L++C+G ++GK VH ++ + + + L+ YS G + +AR V
Sbjct: 14 YSSLLQSCIGANAFRQGKSVHHRAIITASSDPSPPDLLHLSTKLVMFYSHFGDVAAARAV 73
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-----YA 225
F GM R VVSWT+M+SGY + EA+ LF M G PNQFT+ + + A
Sbjct: 74 FDGMPHRSVVSWTAMVSGYAKNGRAPEALELFALMLRSGARPNQFTFGSAARACAGGRCA 133
Query: 226 RRGDSNAAFAFFSRMTAEGFV--------------------------PDLVTWNAMISGF 259
R G+ A A R + FV DLV+WNA++ GF
Sbjct: 134 RSGEQVHACAAKGRHAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNALMRGF 193
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
+ ++AL LF ML G+ P++ T L+A G I IH + ++G +
Sbjct: 194 VERGHYSDALGLFASMLRDGMLPDHFTFGSALKACGAISVIFNVELIHTCIIKLGYWDEK 253
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM----VDSSIELFER 375
++LID Y+KC SL AR +++ ++ S A+I H M + +++LF +
Sbjct: 254 VATASLIDSYAKCRSLSSARVIYDSICEPDLVSSTALI---SDHSMDRNYSEDAMKLFCK 310
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
+ EG+R + + L ++L C++ ++ G +I M ++ + A +VDM +SG
Sbjct: 311 IHREGLRIDGILLSALLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNA-LVDMYAKSG 369
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLS 494
+++ ++P S + C HG + AVT+ E G++ D F+ L
Sbjct: 370 EYLDSRRAFDEMPSRNVISWT-SLITACAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLL 428
Query: 495 NICAADG 501
+ C+ G
Sbjct: 429 SACSHSG 435
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L LLG C +++ G Q+HA + + +L + LV +YA G+ +R FD++P
Sbjct: 323 LSALLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEYLDSRRAFDEMP 382
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ NV ++ A A G ++A+ F+ M E + N TF +L AC + KG +
Sbjct: 383 SRNVISWTSLITACAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGMMNKGME 442
Query: 135 -VHAVATQMGFENDVSVGNALIDMYSKCGLL 164
++ + G + ++ ID+ ++ G L
Sbjct: 443 YFTSMMNKYGIDPRAKHYSSAIDLLARGGQL 473
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 263/500 (52%), Gaps = 46/500 (9%)
Query: 31 QGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNS---ARLVFDKIPNPNVFMLNWMVMA 87
Q +++HA + LN L L + CG +N A +F + NP + + N M+
Sbjct: 24 QLREIHAHFLRHGLN--QLNQILSHFVSICGSLNKMAYANRIFKQTQNPTIILFNAMIKG 81
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ G F+E+ FS M+ +++T + +LKAC L ++ GK +H +GFE
Sbjct: 82 YSLNGPFEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLGKCMHKEVLVVGFEGF 141
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
++ +I++YS CG++ A +VF M++RDV+ W MI G+C
Sbjct: 142 SAIRIGVIELYSSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFC----------------- 184
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
+RGD + F +M +V+WN MIS AQS+R++E
Sbjct: 185 ------------------KRGDVDMGLCLFRQMRKR----SVVSWNIMISCLAQSRRDSE 222
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID-VFTGSALI 326
AL LF ML G KP+ TV VL GS+ +G+ IH+ GL+ D V G+AL+
Sbjct: 223 ALGLFHDMLDWGFKPDEATVVTVLPICARLGSVDVGKWIHSYAKSSGLYRDFVAVGNALV 282
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
D Y+K G + AR +F+ KNV SWN +I +G + +EL E M+ EG+R N+
Sbjct: 283 DFYNKSGMFETARRVFDEMPRKNVISWNTLISGLALNGNGELGVELLEEMMNEGVRPNDA 342
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T + VLS C+H GL E+G E+ SM E + ++ EHY C+VD+L RSG + EAYDL+R
Sbjct: 343 TFVGVLSCCAHAGLFERGRELLASMVEHHQIEPKLEHYGCMVDLLGRSGCVREAYDLIRI 402
Query: 447 VPMYVTN-SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
+P N ++ G+ + C HG +LA +E ++ +V+LSN+ A + W +
Sbjct: 403 MPGGAPNAALWGSLLSACRTHGDVELAHLAVKELIDLEPWNSGNYVLLSNMYAEEERWDK 462
Query: 506 AENLRKIMKEKNVQKQPGFS 525
N+R +M+EKNV+K PG S
Sbjct: 463 VANVRGMMREKNVKKTPGQS 482
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + ++ GK +H+ ++ L + ++ + LV Y G +AR VFD++P
Sbjct: 245 VLPICARLGSVDVGKWIHSYAKSSGLYRDFVAVGNALVDFYNKSGMFETARRVFDEMPRK 304
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV N ++ A GN + + M R N TF VL C ++G+++
Sbjct: 305 NVISWNTLISGLALNGNGELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRELL 364
Query: 137 A-VATQMGFENDVSVGNALIDMYSKCG 162
A + E + ++D+ + G
Sbjct: 365 ASMVEHHQIEPKLEHYGCMVDLLGRSG 391
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 273/517 (52%), Gaps = 37/517 (7%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFS 102
N+F + S +V +Y AR VFD +P + + W M S F+ N F+++I F
Sbjct: 147 NLF-VGSAIVDLYFKFTRAELARKVFDVMPERDTVL--WNTMISGFSRNSYFEDSIRVFV 203
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M + + T + VL A L + + G + +A++ G +DV V LI +YSKCG
Sbjct: 204 DMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCG 263
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
C R +F + + D++S+ +MISGY + + AV LF + G N T +I
Sbjct: 264 KSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIP 323
Query: 223 SYA----------------------RRGDSNAAFAFFSRMTAEGFV-------PD--LVT 251
Y + S A + R+ F P+ L +
Sbjct: 324 VYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLAS 383
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
WNAMISG+ Q+ + A+ LF+ M+ + PN VTVT +L A G++ IG+ +H L+
Sbjct: 384 WNAMISGYTQNGLTDRAISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIK 442
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
L +V+ +AL+DMY+KCGS+ +AR LF++ KNV +WNAMI YG HG +++
Sbjct: 443 SERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALK 502
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LF ML+ G+ VT +S+L ACSH GLV +G EIF SM YG + EHYAC+VD+L
Sbjct: 503 LFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDIL 562
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
R+G++ A + + ++P+ ++ GA C IH ++A + F++ +V
Sbjct: 563 GRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYV 622
Query: 492 MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+LSNI + D + +A ++R+++K++ + K PG + +E
Sbjct: 623 LLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIE 659
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 249/516 (48%), Gaps = 57/516 (11%)
Query: 26 SKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
+ L Q Q+ A L + ++ S +KL + G V R +F+K+ P++F+ N +
Sbjct: 24 ATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVL 83
Query: 85 VMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
+ + G + +I ++ +R+ R + FT++ + A L D + G +HA + G
Sbjct: 84 IRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDG 143
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
+++ VG+A++D+Y K AR+VF M ERD V W +MISG+ S ++++ +F
Sbjct: 144 VASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFV 203
Query: 204 RM-----------------------------------KLEGLEPNQFTYNAIIASYARRG 228
M +GL + + +I+ Y++ G
Sbjct: 204 DMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCG 263
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
S F ++ PDL+++NAMISG+ + A+ LF+ +L SG + N+ T+
Sbjct: 264 KSCKGRILFDQIDQ----PDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLV 319
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
G++ +Q+ R I L ++G+ + +AL +Y + ++ AR LF+ + K
Sbjct: 320 GLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEK 379
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI- 407
++ASWNAMI Y ++G+ D +I LF+ M+ + + N VT+ S+LSAC+ G + G +
Sbjct: 380 SLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVH 438
Query: 408 --FRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNG 462
+S + V +S +VDM + G +VEA +DL+ + N+M G
Sbjct: 439 GLIKSERLESNVYVS----TALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMI----TG 490
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+HG A+ + E + G+ P G LS + A
Sbjct: 491 YGLHGHGKEALKLFYEMLQSGI-PPTGVTFLSILYA 525
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 287/532 (53%), Gaps = 45/532 (8%)
Query: 36 HALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ 95
HA T++ N+FS + L+ YA ++ A +FD+IP P++ N ++ A A G+
Sbjct: 64 HAFNQTHEPNVFSFNA-LIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTL 122
Query: 96 EAIGYFSLMREFIYRCNKFTFSIVLKAC---VGLLDIKKGKQVHAVATQMGFENDVSVGN 152
A+ F MRE + FTFS V+ AC VGL+ +Q+H++A GF++ VSV N
Sbjct: 123 SALSLFGEMREMGLVMDGFTFSGVITACCNHVGLI-----RQLHSLAFSSGFDSYVSVKN 177
Query: 153 ALIDMYSKCGLLCSARRVFHGMFE--RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
+L+ YSK G+L A VF+GM E RD VSW SMI Y + +A+ L+ M G
Sbjct: 178 SLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGF 237
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV------------------------ 246
E + FT +++ +++ D + F ++ GF
Sbjct: 238 EIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESR 297
Query: 247 --------PDLVTWNAMISGFAQSKREN-EALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
DLV WN MISG++Q+K + EAL+ F+ M +G P++ + + A
Sbjct: 298 KVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNL 357
Query: 298 GSIQIGREIHALVCRMGLHID-VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
S G++ HAL + + + + +AL+ MYSKCG+L+DAR LF+ N + N++
Sbjct: 358 SSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSI 417
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I Y +HG+ S+ LFE+ML + +TL+S+LSAC+H G VE+G + F MK+ +G
Sbjct: 418 IAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFG 477
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
++ EHY+C++D+L R+G++ EA L+ +P ++ A C +G +LA
Sbjct: 478 IEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAA 537
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+F ++ ++ML+++ +A +W EA +RK+M+++ ++K+PG S +E
Sbjct: 538 NQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIE 589
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 170/374 (45%), Gaps = 54/374 (14%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
+F +LK+C+ D+ GK +H + + + + N I +YSKC LL +A F+
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
E +V S+ ++I+ Y S + A LF+++ +P+ ++N +I +YA RGD+ +A
Sbjct: 70 HEPNVFSFNALIAAYAKESLIHVAHHLFDQIP----QPDLVSFNTLINAYADRGDTLSAL 125
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
+ F M G V D GF T +GV+ A
Sbjct: 126 SLFGEMREMGLVMD---------GF--------------------------TFSGVITA- 149
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE--ITRIKNVAS 352
+ + R++H+L G V ++L+ YSK G L++A +F +++ S
Sbjct: 150 -CCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVS 208
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
WN+MI YG+H ++ L+ M+ G + TL SVL+ S + GL+ F +
Sbjct: 209 WNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQ-FHAKA 267
Query: 413 ERYGVKISKEHYACVVDMLCRSGR-MVEAYDLLRQV---PMYVTNSMAGAFRNGCNIHGR 468
+ G ++ + ++DM + G M E+ + ++ + V N+M +
Sbjct: 268 IKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQN------ 321
Query: 469 RDLAVTMGEEFFEM 482
++L+V E F +M
Sbjct: 322 KELSVEALECFRQM 335
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 9/222 (4%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C + C + QGKQ HAL +++ N S+ + LV +Y+ CG++ AR +F ++P
Sbjct: 349 CAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQ 408
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
N LN ++ A G E++ F M T +L AC +++GK+
Sbjct: 409 HNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKY 468
Query: 136 HAVATQM-GFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISG---YC 190
+ + G E + + +ID+ + G L A R+ M F +W +++ Y
Sbjct: 469 FNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYG 528
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
N+ ++A F ++LE + A + S AR+ + A
Sbjct: 529 NMELAEKAANQF--LQLEPTNAVPYIMLASMYSAARKWEEAA 568
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 273/517 (52%), Gaps = 37/517 (7%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFS 102
N+F + S +V +Y AR VFD +P + + W M S F+ N F+++I F
Sbjct: 147 NLF-VGSAIVDLYFKFTRAELARKVFDVMPERDTVL--WNTMISGFSRNSYFEDSIRVFV 203
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M + + T + VL A L + + G + +A++ G +DV V LI +YSKCG
Sbjct: 204 DMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCG 263
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
C R +F + + D++S+ +MISGY + + AV LF + G N T +I
Sbjct: 264 KSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIP 323
Query: 223 SYA----------------------RRGDSNAAFAFFSRMTAEGFV-------PD--LVT 251
Y + S A + R+ F P+ L +
Sbjct: 324 VYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLAS 383
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
WNAMISG+ Q+ + A+ LF+ M+ + PN VTVT +L A G++ IG+ +H L+
Sbjct: 384 WNAMISGYTQNGLTDRAISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIK 442
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
L +V+ +AL+DMY+KCGS+ +AR LF++ KNV +WNAMI YG HG +++
Sbjct: 443 SERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALK 502
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LF ML+ G+ VT +S+L ACSH GLV +G EIF SM YG + EHYAC+VD+L
Sbjct: 503 LFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDIL 562
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
R+G++ A + + ++P+ ++ GA C IH ++A + F++ +V
Sbjct: 563 GRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYV 622
Query: 492 MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+LSNI + D + +A ++R+++K++ + K PG + +E
Sbjct: 623 LLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIE 659
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 249/516 (48%), Gaps = 57/516 (11%)
Query: 26 SKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
+ L Q Q+ A L + ++ S +KL + G V R +F+K+ P++F+ N +
Sbjct: 24 ATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVL 83
Query: 85 VMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
+ + G + +I ++ +R+ R + FT++ + A L D + G +HA + G
Sbjct: 84 IRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDG 143
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
+++ VG+A++D+Y K AR+VF M ERD V W +MISG+ S ++++ +F
Sbjct: 144 VASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFV 203
Query: 204 RM-----------------------------------KLEGLEPNQFTYNAIIASYARRG 228
M +GL + + +I+ Y++ G
Sbjct: 204 DMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCG 263
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
S F ++ PDL+++NAMISG+ + A+ LF+ +L SG + N+ T+
Sbjct: 264 KSCKGRILFDQIDQ----PDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLV 319
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
G++ +Q+ R I L ++G+ + +AL +Y + ++ AR LF+ + K
Sbjct: 320 GLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEK 379
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI- 407
++ASWNAMI Y ++G+ D +I LF+ M+ + + N VT+ S+LSAC+ G + G +
Sbjct: 380 SLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVH 438
Query: 408 --FRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNG 462
+S + V +S +VDM + G +VEA +DL+ + N+M G
Sbjct: 439 GLIKSERLESNVYVS----TALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMI----TG 490
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+HG A+ + E + G+ P G LS + A
Sbjct: 491 YGLHGHGKEALKLFYEMLQSGI-PPTGVTFLSILYA 525
>gi|347954472|gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus sativus]
Length = 806
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 158/510 (30%), Positives = 268/510 (52%), Gaps = 2/510 (0%)
Query: 31 QGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
+GKQ HA+ N L + + L + ++ Y G + A +VFD++ +V N ++
Sbjct: 267 EGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLISGYV 326
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
G ++AI LMR + + T S ++ A + K GK+V + FE+D+
Sbjct: 327 QQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIG 386
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+ + +IDMY+KCG + A+RVF ++D++ W ++++ Y EA+ LF M+LE
Sbjct: 387 LASTVIDMYAKCGSIVDAKRVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLES 446
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
+ PN T+N II S R G + A F +M + G VP LV+W M++G Q+ EA+
Sbjct: 447 VPPNAITWNLIILSLFRNGQVDEAKEMFLQMQSSGIVPTLVSWTTMMNGLVQNGCSEEAV 506
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH-IDVFTGSALIDM 328
+ M SG++PN ++T L A S+ +GR +H + R LH V +ALIDM
Sbjct: 507 HYLRKMQESGLRPNVFSITVALSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDM 566
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y+KCG + A +F+ + +NAMI Y G V +I+L+ + + G++ + +T
Sbjct: 567 YAKCGDISKAEKVFKRKSYSELPLFNAMISAYALSGNVKEAIDLYRSLEDMGIKPDNITF 626
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+VLSAC+H G + + +EIF M ++G++ EHY +VD+L +G +A L+ ++P
Sbjct: 627 TNVLSACNHAGDINQAIEIFSDMVSKHGMEPCLEHYGLMVDLLASAGETEKALRLMEEMP 686
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
M + CN + +L + + E +V +SN A +G W E
Sbjct: 687 YKPDARMIQSLLVTCNEEHKTELVDYLSRQLLESEPDNSGNYVTISNAYAGEGSWDEVVK 746
Query: 509 LRKIMKEKNVQKQPGFSRVEKRNEFVEKEV 538
+R++MK+K ++K+PG S ++ + E V
Sbjct: 747 MREMMKDKGLKKKPGCSWIQIKGXXEEVHV 776
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 227/470 (48%), Gaps = 48/470 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIP 74
+L C+ + G+Q+HA + N ++ +++KLV YA C A +F K+
Sbjct: 50 ILQGCVYERDFHTGRQIHARILKNG-EFYAKNEYIETKLVIFYAKCDAHEIAETLFSKLR 108
Query: 75 NPNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
NVF ++ G + A+ G+ ++++ I+ N F V KAC L G+
Sbjct: 109 VRNVFSWAAIIGVKCRVGLAEGALMGFVEMLKDEIFPDN-FVVPNVCKACGALQWSGFGR 167
Query: 134 QVHAVATQMGFEND-VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+H + G D V V ++L DMY KCG+L AR+VF + ER+VV+W +++ GY
Sbjct: 168 GIHGYVAKSGLYGDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQN 227
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIAS----------------------------- 223
+EA+ L M+ EG+EP + T + +++
Sbjct: 228 GMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMCGVGEGKQSHAVAVVNGLEMDNILG 287
Query: 224 ------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
Y + G A F RM + D+VTWN +ISG+ Q +A+++ K M +
Sbjct: 288 TSVLNFYCKVGLIEYAEMVFDRMIGK----DVVTWNLLISGYVQQGLVEDAIRMCKLMRL 343
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
+K + VT++ ++ A T + ++G+E+ R D+ S +IDMY+KCGS+ D
Sbjct: 344 EKLKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIGLASTVIDMYAKCGSIVD 403
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A+ +F+ T K++ WN ++ Y + G+ ++ LF M E + N +T ++ +
Sbjct: 404 AKRVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNAITWNLIILSLFR 463
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
G V++ E+F M+ G+ + + +++ L ++G EA LR++
Sbjct: 464 NGQVDEAKEMFLQMQSS-GIVPTLVSWTTMMNGLVQNGCSEEAVHYLRKM 512
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 185/409 (45%), Gaps = 46/409 (11%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG--FENDVS 149
G +EA+ + M R + +L+ CV D G+Q+HA + G + +
Sbjct: 23 GEIREALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGRQIHARILKNGEFYAKNEY 82
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+ L+ Y+KC A +F + R+V SW ++I C V + A++ F M +
Sbjct: 83 IETKLVIFYAKCDAHEIAETLFSKLRVRNVFSWAAIIGVKCRVGLAEGALMGFVEMLKDE 142
Query: 210 LEPNQFTYNAI---------------IASYARRGDSNAAFAFFSRMTAEGF--------- 245
+ P+ F + I Y + F + A+ +
Sbjct: 143 IFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGLYGDCVFVASSLADMYGKCGVLDDA 202
Query: 246 ------VPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+P+ +V WNA++ G+ Q+ EA++L M G++P VTV+ L A
Sbjct: 203 RKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANM 262
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
+ G++ HA+ GL +D G+++++ Y K G ++ A +F+ K+V +WN +I
Sbjct: 263 CGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLI 322
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
Y + G+V+ +I + + M E ++ + VTL +++SA + + G E+ + Y +
Sbjct: 323 SGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEV-----QCYCI 377
Query: 418 KISKEH----YACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
+ S E + V+DM + G +V+A +D Q + + N++ A+
Sbjct: 378 RHSFESDIGLASTVIDMYAKCGSIVDAKRVFDSTVQKDLILWNTLLAAY 426
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 29/243 (11%)
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG- 314
+S ++ EAL L M ++ +LQ GR+IHA + + G
Sbjct: 16 VSSLCKNGEIREALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGRQIHARILKNGE 75
Query: 315 -LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
+ + + L+ Y+KC + + A TLF R++NV SW A+IG + G+ + ++ F
Sbjct: 76 FYAKNEYIETKLVIFYAKCDAHEIAETLFSKLRVRNVFSWAAIIGVKCRVGLAEGALMGF 135
Query: 374 ERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLEIFRSMKERYGVKISKE 422
ML++ + + + +V AC HG + + GL YG +
Sbjct: 136 VEMLKDEIFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGL---------YGDCVFVA 186
Query: 423 HYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNS-MAGAFRNGCNIHGRRDLAVTMGEE 478
+ + DM + G + +A + ++P + N+ M G +NG N R L M EE
Sbjct: 187 --SSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIR-LMCDMREE 243
Query: 479 FFE 481
E
Sbjct: 244 GVE 246
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 177/557 (31%), Positives = 286/557 (51%), Gaps = 43/557 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L KC L Q KQ+HA + +L+ + KL+ + C N A VF+++ PNV
Sbjct: 26 LPKCAN---LNQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNV 82
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
+ N ++ A A +A FS M+ F + FT+ +LKAC GL + K +H
Sbjct: 83 HLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKMMHNH 142
Query: 139 ATQMGFENDVSVGNALIDMYSKC---------------------------------GLLC 165
++G +D+ V NALID YS+C G L
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
AR++F M +RD++SW +M+ GY ++ A LFE+M E N +++ ++ Y+
Sbjct: 203 DARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMP----ERNTVSWSTMVMGYS 258
Query: 226 RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ GD A F +M ++VTW +I+G+A+ EA KL M+ SG++ +
Sbjct: 259 KAGDMEMARVMFDKMPFPA--KNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAA 316
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
+L A +G + +G H+++ + L+ + +AL+DMY+KCGSLK A +F
Sbjct: 317 AAISILAACAESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDM 376
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
K++ SWN M+ G HG +IELF RM +EG+ ++VT I+VL +C+H GL+++G+
Sbjct: 377 PKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGI 436
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
+ F SM++ Y + EHY C+VD+L R GR+ EA +++ +PM + GA C +
Sbjct: 437 DYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGALLGACRM 496
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
H D+A + + ++ P + +LSNI AA +W ++R MK V+K G S
Sbjct: 497 HNEVDIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGAS 556
Query: 526 RVEKRNEFVEKEVQNES 542
VE + E V ++S
Sbjct: 557 SVELEDGIHEFTVFDKS 573
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 274/517 (52%), Gaps = 43/517 (8%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFI 108
+ L+ Y+ G V+ AR VFD+I + + M++W M +++ N F EA+ +FS MR
Sbjct: 85 TALIDAYSVSGCVSMAREVFDEISSKD--MVSWTGMIASYAENDCFSEALEFFSQMRVAG 142
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
++ N FTF+ VLKAC+GL + GK VH + +E D+ VG L+++Y++CG A
Sbjct: 143 FKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAW 202
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
R F M + DV+ W+ MIS + + ++A+ +F +M+ + PNQFT+
Sbjct: 203 RAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIE 262
Query: 218 ------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
NA++A YA+ G + F ++ + V+WN
Sbjct: 263 SLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDR----NDVSWN 318
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
+I + Q AL LF ML ++ VT + +L+A ++++G ++H L +
Sbjct: 319 TIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKT 378
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
DV G+ALIDMY+KCGS+KDAR +F++ +++ SWNA+I Y HG+ +I++F
Sbjct: 379 IYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMF 438
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
M E + +E+T + VLSACS+ G +++G + F SMK+ YG++ EHY C+V ++ R
Sbjct: 439 NLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGR 498
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
SG + +A + +P + + A C IH +L + E+ R V+L
Sbjct: 499 SGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLL 558
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
SNI A W +RK MK K V+K+PG S +E +
Sbjct: 559 SNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQ 595
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 231/489 (47%), Gaps = 52/489 (10%)
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
+VFD++P N ++ A + F EA F+ + + N F F+ VLK V +
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+ G+ VH ++G+ ++ +G ALID YS G + AR VF + +D+VSWT MI+
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------ 223
Y EA+ F +M++ G +PN FT+ ++ +
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180
Query: 224 -----------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLF 272
Y R GD++ A+ F M +P W+ MIS FAQS + +AL++F
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIP----WSFMISRFAQSGQSEKALEIF 236
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
M + + PN T + VLQA S+ + + IH + GL DVF +AL+ Y+KC
Sbjct: 237 CQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKC 296
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G ++ + LFE +N SWN +I Y + G + ++ LF ML ++A EVT S+L
Sbjct: 297 GCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSIL 356
Query: 393 SACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVP 448
AC+ +E GL++ + K YG ++ + ++DM + G + +A +D+L
Sbjct: 357 RACATLAALELGLQVHCLTAKTIYGQDVAVGN--ALIDMYAKCGSIKDARFMFDMLDLRD 414
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEA 506
N++ G ++HG A+ M E KPD FV + + C+ G E
Sbjct: 415 KVSWNAIIC----GYSMHGLGVEAIKMFNLMKETKC-KPDELTFVGVLSACSNTGRLDEG 469
Query: 507 ENLRKIMKE 515
+ MK+
Sbjct: 470 KQYFTSMKQ 478
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 146/282 (51%), Gaps = 5/282 (1%)
Query: 24 MKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
++S L + HAL ++F + + L+ YA CG + + +F+ + + N N
Sbjct: 261 IESLDLSKTIHGHALKAGLSTDVF-VSNALMACYAKCGCIEQSMELFEALSDRNDVSWNT 319
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
++++ G+ + A+ FS M + + + T+S +L+AC L ++ G QVH + +
Sbjct: 320 IIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTI 379
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
+ DV+VGNALIDMY+KCG + AR +F + RD VSW ++I GY EA+ +F
Sbjct: 380 YGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFN 439
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQS 262
MK +P++ T+ ++++ + G + +F+ M + G P + + M+ +S
Sbjct: 440 LMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRS 499
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
++A+K + + +P+ + +L A + +++GR
Sbjct: 500 GNLDQAVKFIEDI---PFEPSVMIWRALLGACVIHNDVELGR 538
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 267/516 (51%), Gaps = 39/516 (7%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
S ++ G + A+ VFD +PN +V N ++ G F A F M +
Sbjct: 169 SSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIK 228
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ T + +++AC G+ ++K GK +H +G ND+ V + +DMYSK G + SAR V
Sbjct: 229 PSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWV 288
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM------------------------- 205
F+ M R++VSW +MISG V E+ LF R+
Sbjct: 289 FYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASL 348
Query: 206 ---------KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
+ E N AI+ Y++ G A F+RM +++TW AM+
Sbjct: 349 ATGKILHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDR----NVITWTAML 404
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
G AQ+ +AL+LF M GI N+VT ++ + GS++ GR IH + R+G
Sbjct: 405 VGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFA 464
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRI-KNVASWNAMIGCYGKHGMVDSSIELFER 375
D+ +AL+DMY+KCG + A +F I K+V WN+MI YG HG ++ ++ +
Sbjct: 465 FDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHK 524
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M+EEG++ N+ T +S+LSACSH LVE+G+ +F SM+ + ++ ++HYAC+VD+L R+G
Sbjct: 525 MIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAG 584
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
R EA L+ ++P ++ A +GC H +L + ++ + P ++MLSN
Sbjct: 585 RFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSN 644
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
I A W + + +R +M+ + ++K PG+S VE N
Sbjct: 645 IYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGN 680
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 240/509 (47%), Gaps = 43/509 (8%)
Query: 26 SKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
SK L K HA + TN L+ + +KLV Y+ + +AR VFD+ P + N M
Sbjct: 42 SKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAM 101
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ +G ++E + F LMR + + + LKAC LD + G ++ + A + G
Sbjct: 102 LCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGM 161
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
E + VG+++I K G + A+RVF GM +DVV W S+I GY D A LF
Sbjct: 162 EKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFE 221
Query: 205 MKLEGLEPNQFTYNAIIAS-----------------------------------YARRGD 229
M G++P+ T ++I + Y++ GD
Sbjct: 222 MHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGD 281
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+A F +M +LV+WNAMISG ++ E+ LF ++ S + T+
Sbjct: 282 IESARWVFYKMPTR----NLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVS 337
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
+LQ T S+ G+ +H R ++ +A++D+YSKCGSLK A +F + +N
Sbjct: 338 LLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRN 396
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
V +W AM+ ++G + ++ LF +M EEG+ AN VT +S++ +C+H G +++G I
Sbjct: 397 VITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHG 456
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
+ R G + +VDM + G++ A + + + + G +HG
Sbjct: 457 HLF-RLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHG 515
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
AV + + E GL KP+ LS + A
Sbjct: 516 YQAVGIYHKMIEEGL-KPNQTTFLSLLSA 543
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 152/304 (50%), Gaps = 5/304 (1%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCG 61
+RL+ + + LL C ++ +L GK +H + + L + +V +Y+ CG
Sbjct: 321 HRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLILSTAIVDLYSKCG 380
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLK 121
+ A VF+++ + NV M++ A G+ ++A+ F+ M+E N TF ++
Sbjct: 381 SLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVH 440
Query: 122 ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF-HGMFERDVV 180
+C L +K+G+ +H ++GF D+ AL+DMY+KCG + A R+F HG +DVV
Sbjct: 441 SCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVV 500
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
W SMI+GY +AV ++ +M EGL+PNQ T+ +++++ + + F+ M
Sbjct: 501 LWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSM 560
Query: 241 TAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
+ + P + ++ +++ R EA L + M +P + +L +
Sbjct: 561 ERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKM---PFQPGTAVLEALLSGCRTHKN 617
Query: 300 IQIG 303
I +G
Sbjct: 618 INLG 621
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 180/395 (45%), Gaps = 51/395 (12%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
LGKCM L G ND+ + + V +Y+ GD+ SAR VF K+P N+
Sbjct: 249 LGKCMHGYVLGLG-------LGNDILVL---TSFVDMYSKMGDIESARWVFYKMPTRNLV 298
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV---LKACVGLLDIKKGKQVH 136
N M+ G E+ F L + F + + L+ C + GK +H
Sbjct: 299 SWNAMISGCVRNGLVGES---FDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILH 355
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + FE+++ + A++D+YSKCG L A VF+ M +R+V++WT+M+ G +
Sbjct: 356 GCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAE 414
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDS------NAAFAF--------- 236
+A+ LF +M+ EG+ N T+ +++ S A +RG S FAF
Sbjct: 415 DALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALV 474
Query: 237 -----------FSRMTAEGFVP-DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
R+ + G + D+V WN+MI+G+ +A+ ++ M+ G+KPN
Sbjct: 475 DMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQ 534
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCR-MGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
T +L A + ++ G + + R + + L+D+ S+ G ++A+ L E
Sbjct: 535 TTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIE 594
Query: 344 ITRIK-NVASWNAMIGCYGKHGMVDSSIELFERML 377
+ A A++ H ++ I+ +++L
Sbjct: 595 KMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLL 629
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 162/519 (31%), Positives = 272/519 (52%), Gaps = 21/519 (4%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
+N L L GK + + LR S+ KL+ VYA CG+ AR +FD
Sbjct: 33 DINTLKKLHGKVLNDQYLRWNP--------------SVGIKLMRVYAACGEPGLARHIFD 78
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+I + NV N M+ + +++A+ + M + + +T+ VLKA +
Sbjct: 79 EITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWV 138
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G Q+H ++G + ++ VGN LI MY KC L A++V + RDVVSW SM+S Y
Sbjct: 139 GLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQ 198
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA--FFSRMTAEGFVPDL 249
+ ++A+ L M+ L+PN T +++ + N + F ++T + +
Sbjct: 199 NGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKS----V 254
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
++WN MI+ + + EA+ L+ M +G++P+ V++ VL A G ++ +GR +H
Sbjct: 255 ISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKF 314
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
R L ++ +ALIDMY+KCG L+DAR +F + ++V SW ++I YGK G +
Sbjct: 315 AERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDA 374
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+ +F M G+ + + +SVL+ACSH GL++ G F M E G+ EH+ACVVD
Sbjct: 375 VAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAE-CGITPKLEHFACVVD 433
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
+L R+G++ EAY +RQ+P+ + G + C ++ ++ + ++ +
Sbjct: 434 LLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGY 493
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+V+LSNI A G W + +R IM+ K ++K PG S VE
Sbjct: 494 YVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVE 532
>gi|39546235|emb|CAE04244.3| OSJNBa0089N06.5 [Oryza sativa Japonica Group]
gi|125549842|gb|EAY95664.1| hypothetical protein OsI_17530 [Oryza sativa Indica Group]
gi|215686910|dbj|BAG90780.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 559
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 288/559 (51%), Gaps = 46/559 (8%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI--FSLKSKLVGVYAGCGDVN 64
P L + L C C+ S A RQGK VH + + L +KLV YA GDV
Sbjct: 9 PTAPLYSSLLQC----CISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVA 64
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
+AR VFD +P+ +V MV A G +EA+ F+LMR R N+FT+ AC
Sbjct: 65 AARKVFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACA 124
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
G + G+QVHA A + F D+ V +AL+DM+ +CG + AR++F M ++DVVSW +
Sbjct: 125 GAGCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNA 184
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------- 217
+I G+ +A+ LF M E + P+ +T
Sbjct: 185 LIRGFVERGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLG 244
Query: 218 --------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE-A 268
++I SYA+ ++A + ++ PDLV+ A+ISG+ + +E A
Sbjct: 245 YWDEKVVIGSLINSYAKCRSMSSARVIYDSISE----PDLVSSTALISGYTMDRNYSEDA 300
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
++LF + G+ + V ++ VL S + G +IHA +C+ D+ +AL+DM
Sbjct: 301 MELFCKIHRKGLWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDM 360
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y+K G DA+ F+ +NV SW ++I G++G + ++ LF RM+E+G+R N+VT
Sbjct: 361 YAKAGEFSDAKRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTF 420
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+S+LSAC H GL KG+E F SM RYG+ EHY+ +D+L R G++ +A+ L+++
Sbjct: 421 LSLLSACGHCGLTNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTN 480
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
+ +SM GA C +HG L T + F + + +L+N+ A W +A+
Sbjct: 481 LKPNSSMLGAMLGACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQR 540
Query: 509 LRKIMKEKNVQKQPGFSRV 527
R+++ E K+ GFS +
Sbjct: 541 TREVIDETTDGKEVGFSVI 559
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 179/561 (31%), Positives = 283/561 (50%), Gaps = 43/561 (7%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C L KC L Q+HA + +L ++F + KL+ ++ C + SA VF+ +P+
Sbjct: 26 CDLHKC---SNLDSVNQIHAQVLKANLHQDLF-VAPKLIAAFSLCRHLASAVNVFNHVPH 81
Query: 76 PNVFMLNWMVMASAFTGNFQEAI--GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
PNV + N ++ A A + +F + + ++ N FT+ +LKAC G + +
Sbjct: 82 PNVHLYNSIIRAHAHNTSHPSLPFNAFFQMQKNGLFPDN-FTYPFLLKACTGPSSLPLVR 140
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGL--LCSARRVFHGMFERDVVSWTSMISGYCN 191
+HA + GF D+ V N+LID YS+CG L A +F M ERDVV+W SMI G
Sbjct: 141 MIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVR 200
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP---- 247
+++ A LF+ M E + ++N ++ YA+ G+ + AF F RM V
Sbjct: 201 CGELEGACKLFDEMP----ERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTM 256
Query: 248 -----------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
++V W +I+G+A+ EA +L+ M +G++P++
Sbjct: 257 VCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDD 316
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE- 343
+ +L A +G + +G+ IHA + R +A IDMY+KCG L A +F
Sbjct: 317 GFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSG 376
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ K+V SWN+MI + HG + ++ELF RM+ EG + T + +L AC+H GLV +
Sbjct: 377 MMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNE 436
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
G + F SM++ YG+ EHY C++D+L R G + EA+ LLR +PM + G N C
Sbjct: 437 GRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNAC 496
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
+H D A + E+ F++ P + +LSNI A G+W N+R M QK G
Sbjct: 497 RMHNDVDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSG 556
Query: 524 FSRVEKRNEFVEKEVQNESKA 544
S +E E E V ++S
Sbjct: 557 ASSIEVEEEVHEFTVFDQSHP 577
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 19/226 (8%)
Query: 15 YLDCLLGKCMKSKALRQGKQVHALL------C-TNDLNIFSLKSKLVGVYAGCGDVNSAR 67
+L +L C +S L GK++HA + C T LN F + +YA CG +++A
Sbjct: 318 FLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAF------IDMYAKCGCLDAAF 371
Query: 68 LVFDK-IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
VF + +V N M+ A G+ ++A+ FS M + + +TF +L AC
Sbjct: 372 DVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHA 431
Query: 127 LDIKKG-KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTS 184
+ +G K +++ G V ++D+ + G L A + M E + + +
Sbjct: 432 GLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGT 491
Query: 185 MISGYCNVSKVDEAVVLFERM-KLEGLEPNQFTYNAIIASYARRGD 229
+++ + VD A + E++ K+E +P ++ + I YA+ GD
Sbjct: 492 LLNACRMHNDVDFARAVCEQLFKVEPTDPGNYSLLSNI--YAQAGD 535
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 171/526 (32%), Positives = 270/526 (51%), Gaps = 42/526 (7%)
Query: 43 DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS 102
+L++F + S L+ Y+ G ++ AR +FD++P+ + + N M+ G++ A G F
Sbjct: 179 ELDVF-VGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFM 237
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGN--ALIDMYSK 160
MR N TF+ VL C + I G Q+H + G E D V N ALID+Y K
Sbjct: 238 EMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFK 297
Query: 161 CGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--- 217
C + AR++F D+V T+MISGY + A+ +F + E + N T
Sbjct: 298 CRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASV 357
Query: 218 --------------------------------NAIIASYARRGDSNAAFAFFSRMTAEGF 245
+AI+ YA+ G + A F ++ +
Sbjct: 358 LPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDK-- 415
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
D V WN+MI+ +Q+ + EA+ LF+ M ++G K + V+++ L A ++ G+E
Sbjct: 416 --DAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKE 473
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
IHA + R D+F SALIDMYSKCG+L A +F+ KN SWN++I YG HG
Sbjct: 474 IHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGR 533
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
+ S+ LF ML +G++ + VT ++++SAC H G V++G+ FR M E G+ EHYA
Sbjct: 534 LKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYA 593
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
C+VD+ R+GR+ EA+ ++ +P + G C +HG +LA F++ +
Sbjct: 594 CMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQ 653
Query: 486 KPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+V+LSN+ A G+W +R +MKE+ VQK PG S ++ N
Sbjct: 654 NSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNN 699
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 150/537 (27%), Positives = 245/537 (45%), Gaps = 45/537 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C L QG+Q HA + N + L +KL+G+Y CG A+ +F ++
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
NWM+ G F A+ ++ M +K+TF V+KAC GL + G+ VH
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
MGFE DV VG++LI YS+ G + AR +F M +D V W M++GY D
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231
Query: 198 AVVLFERMKLEGLEPNQFTY-------------------NAIIASYARRGDSNAAFAF-- 236
A +F M+ PN T+ + ++ S DS A F
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFAL 291
Query: 237 -----------FSRMTAEGFVP-DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+R + P D+V AMISG+ + N AL++F+ +L ++ N+
Sbjct: 292 IDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANS 351
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
VT+ VL A ++ +G+E+H + + G + GSA++DMY+KCG L A F
Sbjct: 352 VTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIG 411
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
K+ WN+MI ++G + +I+LF +M G + + V++ + LSAC++ + G
Sbjct: 412 ISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYG 471
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRM---VEAYDLLRQVPMYVTNSMAGAFRN 461
EI M R + + ++DM + G + +D + + NS+ A+ N
Sbjct: 472 KEIHAFMM-RGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGN 530
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRKIMKEK 516
HGR ++ + G+ +PD L+ I C G+ E + + M E+
Sbjct: 531 ----HGRLKDSLNLFHGMLGDGI-QPDHVTFLAIISACGHAGQVDEGIHYFRCMTEE 582
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 202/435 (46%), Gaps = 41/435 (9%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK---LVGVYAGCGDVNSARLVFDKIP 74
C+L C + G Q+H L+ ++ L + S + L+ +Y C DV AR +FD+
Sbjct: 253 CVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRT 312
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
++ + M+ G A+ F + + R N T + VL AC GL + GK+
Sbjct: 313 PVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKE 372
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + G VG+A++DMY+KCG L A + F G+ ++D V W SMI+ K
Sbjct: 373 LHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGK 432
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAF----AFFSRMTAEGF 245
+EA+ LF +M + G + + + +A +++ A G AF AF S + AE
Sbjct: 433 PEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESA 492
Query: 246 VPDL----------------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ D+ V+WN++I+ + R ++L LF GML GI+P+
Sbjct: 493 LIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPD 552
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVC---RMGLHIDVFTGSALIDMYSKCGSLKDART 340
+VT ++ A G G Q+ IH C +G+ + + ++D++ + G L +A
Sbjct: 553 HVTFLAIISACGHAG--QVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFG 610
Query: 341 LF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+ + + W ++G HG V+ + E+ R L + N + + + ++ G
Sbjct: 611 MINSMPFSPDAGVWGTLLGACRLHGNVELA-EVASRNLFDLDPQNSGYYVLLSNVHANAG 669
Query: 400 LVEKGLEIFRSMKER 414
E L+I MKER
Sbjct: 670 QWESVLKIRSLMKER 684
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 145/291 (49%), Gaps = 5/291 (1%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C AL GK++H + N + S ++ +YA CG ++ A F I
Sbjct: 354 LASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGIS 413
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ + N M+ + + G +EAI F M + + + S L AC L + GK+
Sbjct: 414 DKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKE 473
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+HA + F +D+ +ALIDMYSKCG L A RVF M E++ VSW S+I+ Y N +
Sbjct: 474 IHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGR 533
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWN 253
+ +++ LF M +G++P+ T+ AII++ G + +F MT E G + + +
Sbjct: 534 LKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYA 593
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
M+ F ++ R NEA + M S P+ +L A L G++++
Sbjct: 594 CMVDLFGRAGRLNEAFGMINSMPFS---PDAGVWGTLLGACRLHGNVELAE 641
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ +LQ + GR+ HA + G+ + G+ L+ MY CG+ DA+ +F R
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+ WN MI + G D ++ + +ML G ++ T V+ AC GGL
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKAC--GGL 160
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 276/552 (50%), Gaps = 40/552 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C +S + G+ +HA T+ L+ + S L+ +Y G ++ + VF ++P
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N ++ G ++E + YFS M + +TF+I LKAC GL +K GK
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA 230
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H GF + V N+L MY++CG + +F M ERDVVSWTS+I Y + +
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ 290
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
+AV F +M+ + PN+ T+ N+
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS 350
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ Y+ G+ +A F M D+++W+ +I G+ Q+ E K F M SG
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCR----DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG 406
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
KP + + +L G I+ GR++HAL GL + S+LI+MYSKCGS+K+A
Sbjct: 407 TKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEAS 466
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F T ++ S AMI Y +HG +I+LFE+ L+ G R + VT ISVL+AC+H G
Sbjct: 467 MIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSG 526
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
++ G F M+E Y ++ +KEHY C+VD+LCR+GR+ +A ++ ++ + +
Sbjct: 527 QLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTL 586
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C G + E E+ V L+NI ++ G EA N+RK MK K V
Sbjct: 587 LIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVI 646
Query: 520 KQPGFSRVEKRN 531
K+PG+S ++ ++
Sbjct: 647 KEPGWSSIKIKD 658
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 221/481 (45%), Gaps = 46/481 (9%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFT--FSI 118
G++ +AR VFDK+P+ ++ ++ N EA+ FS MR + + T S+
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
VLKAC +I G+ +HA A + + V VG++L+DMY + G + + RVF M R+
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------- 217
V+WT++I+G + + E + F M + +T+
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 218 --------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
N++ Y G+ F M+ D+V+W ++I + +
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER----DVVSWTSLIVAYKRIG 289
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
+E +A++ F M S + PN T + A + G ++H V +GL+ + +
Sbjct: 290 QEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSN 349
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
+++ MYS CG+L A LF+ R +++ SW+ +IG Y + G + + F M + G +
Sbjct: 350 SMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKP 409
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
+ L S+LS + ++E G ++ ++ +G++ + + +++M + G + EA +
Sbjct: 410 TDFALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNICAADG 501
+ S+ A NG HG+ A+ + E+ ++G R PD F+ + C G
Sbjct: 469 FGETDRDDIVSLT-AMINGYAEHGKSKEAIDLFEKSLKVGFR-PDSVTFISVLTACTHSG 526
Query: 502 E 502
+
Sbjct: 527 Q 527
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 17/219 (7%)
Query: 186 ISGYCNVS------KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
I +C S V+E +V + +PN + I A G+ AA F +
Sbjct: 11 IQRFCTTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINA-----GNLRAARQVFDK 65
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV--SGIKPNNVTVTGVLQAGGLT 297
M D+V+W ++I + + +EAL LF M V + P+ ++ VL+A G +
Sbjct: 66 MPH----GDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQS 121
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
+I G +HA + L V+ GS+L+DMY + G + + +F +N +W A+I
Sbjct: 122 SNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAII 181
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
G + F M ++ T L AC+
Sbjct: 182 TGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 256/463 (55%), Gaps = 38/463 (8%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
A +F +IPNPN +M N ++ A A + + A+ F M +K+TF+ LK+C
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGS 120
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
+++G+Q+H + G +D+ + N LI +Y+ CG + AR + M ERDVV
Sbjct: 121 FSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVV----- 175
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
++NA++++YA RG A R+ E
Sbjct: 176 ------------------------------SWNALLSAYAERGLMELAS---RRVFGETP 202
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
V ++V+WNAMI+G++ + R +E L LF+ M +G+KP+N T+ VL A G++ G
Sbjct: 203 VKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEW 262
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+HA + + G+ ID F +AL+DMYSKCGS++ A +F K++++WN++I HG
Sbjct: 263 VHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGS 322
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
++++F ML EG + NEVT + VLSACS GL+++G E+F M +G++ + EHY
Sbjct: 323 GQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYG 382
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
C+VD+L R G + EA +L++++P + + + C HG +LA + ++ E+ +
Sbjct: 383 CMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQ 442
Query: 486 KPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ FV LSN+ A+ G W + +R+ M+ + V+K PG S +E
Sbjct: 443 ESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIE 485
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 156/366 (42%), Gaps = 40/366 (10%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI---- 73
L C + +G+Q+H + L ++F +++ L+ +YA CG + AR + D++
Sbjct: 115 LKSCGSFSGVEEGRQIHGHVLKTGLGDDLF-IQNTLIHLYASCGCIEDARHLLDRMLERD 173
Query: 74 ----------------------------PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMR 105
P NV N M+ + G F E + F M+
Sbjct: 174 VVSWNALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQ 233
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
+ + T VL AC + + +G+ VHA + G D V AL+DMYSKCG +
Sbjct: 234 HAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIE 293
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
A VF+ +D+ +W S+ISG A+ +F M +EG +PN+ T+ ++++ +
Sbjct: 294 KALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACS 353
Query: 226 RRGDSNAAFAFFSRMT-AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
R G + F+ M G P + + M+ + EA +L + M K +
Sbjct: 354 RAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKM---PQKEAS 410
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
V +L A G++++ + + + + + L +MY+ G KD + +
Sbjct: 411 VVWESLLGACRNHGNVELAERVAQKLLELSPQ-ESSSFVQLSNMYASMGRWKDVMEVRQK 469
Query: 345 TRIKNV 350
R + V
Sbjct: 470 MRAQGV 475
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 14/241 (5%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C AL QG+ VHA + N ++I + + LV +Y+ CG + A VF+
Sbjct: 244 LVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCL 303
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKG 132
++ N ++ + G+ Q A+ FS M ++ N+ TF VL AC GLLD +G
Sbjct: 304 RKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLD--EG 361
Query: 133 KQVHAVATQM-GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV-VSWTSMISGYC 190
+++ + + G + + ++D+ + GLL A + M +++ V W S++
Sbjct: 362 REMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACR 421
Query: 191 NVSKVDEAVVLFERM--KLEGLEPNQFTYNAIIAS-YARRGDSNAAFAFFSRMTAEGFVP 247
N V+ L ER+ KL L P + + +++ YA G +M A+G
Sbjct: 422 NHGNVE----LAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRK 477
Query: 248 D 248
D
Sbjct: 478 D 478
>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
Length = 667
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/541 (32%), Positives = 277/541 (51%), Gaps = 45/541 (8%)
Query: 30 RQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
R G+ VH AL + + +++ L+ +Y CGDV +A VF + N V N ++
Sbjct: 125 RHGRAVHCRALAAGFGGDTY-VQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAG 183
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
G + A+ F M ++ T VL AC D+ G+ VH + G +
Sbjct: 184 CVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDY 243
Query: 148 VSVGNALIDMYSKCGLLCSARRVF-HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
V+V NALIDMY KC L ARRVF H ++DVVSWT+MI Y + EA+ L +M
Sbjct: 244 VAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQML 303
Query: 207 LEGLE-PNQFTY-----------------------------------NAIIASYARRGDS 230
+ G PN T A+I +YAR G
Sbjct: 304 MSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKM 363
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
R+T E TWNA +SG+ S RE +A++LFK M+ ++P++ T+ +
Sbjct: 364 K-----LMRLTLERGSWRAETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASI 418
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A + ++ G+ IH + +G + LID+YSK G L A LF+ K+V
Sbjct: 419 LPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDV 478
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+W +I YG HG ++I L++RM+E G + N VT+ ++L ACSH G++++G+++F+
Sbjct: 479 VAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKD 538
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M+ +G+ + EHY+C+VDML R+GR+ EA+ L++ +P + S+ GA C +H +
Sbjct: 539 MRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVE 598
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+ F++ +V+L NI AA W + +++R++M E+ + K+PG S VE R
Sbjct: 599 FGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEAR 658
Query: 531 N 531
+
Sbjct: 659 S 659
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 137/471 (29%), Positives = 214/471 (45%), Gaps = 50/471 (10%)
Query: 56 VYAGCGDVNSARLVFDKIPNPN-VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKF 114
VY CG +SA + ++P P V N ++ + G +EA+ +S MR F +
Sbjct: 54 VYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAF----DHL 109
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
TF KAC GL + G+ VH A GF D V NALI MY CG + +A VF M
Sbjct: 110 TFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAM 169
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
R VVSW ++I+G + A+ +F M +G+ ++ T +++ + A+ D N
Sbjct: 170 RNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGR 229
Query: 235 AFFSRMTAEGF--------------------------------VPDLVTWNAMISGFAQS 262
A + +G D+V+W AMI + +
Sbjct: 230 AVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLN 289
Query: 263 KRENEALKLFKGMLVSGIK-PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
R EA+ L ML+SG PN VT+ +L A S + + HAL R+GL D+
Sbjct: 290 DRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAV 349
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
+ALID Y++CG +K R E + +WNA + Y G +IELF+RM+ E +
Sbjct: 350 ETALIDAYARCGKMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELFKRMIAESV 408
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
R + T+ S+L A + +++G I G S E ++D+ ++G + A+
Sbjct: 409 RPDSATMASILPAYAESADLKEGKNI-HCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAW 467
Query: 442 DLLRQVP----MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
L + +P + T +AG IHG A+ + + E G KP+
Sbjct: 468 ALFQWLPEKDVVAWTTIIAGY-----GIHGHARTAILLYDRMVESG-GKPN 512
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 10/289 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C + + K HAL L + ++++ L+ YA CG + RL ++ +
Sbjct: 318 LLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLER---GS 374
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
W S +T G ++AI F M R + T + +L A D+K+GK +
Sbjct: 375 WRAETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNI 434
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H +GF + LID+YSK G L +A +F + E+DVV+WT++I+GY
Sbjct: 435 HCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGIHGHA 494
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM-TAEGFVPDLVTWNA 254
A++L++RM G +PN T ++ + + G + F M G +P+ ++
Sbjct: 495 RTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSC 554
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
++ ++ R EA +L + M +P+ +L A L +++ G
Sbjct: 555 LVDMLGRAGRIEEAHRLIQDM---PFEPSTSVWGALLGACVLHKNVEFG 600
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/513 (32%), Positives = 270/513 (52%), Gaps = 18/513 (3%)
Query: 29 LRQGKQVHALLCTNDLN---------IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
L+ KQ+HAL+ N N + ++ + LVG A N A +F +IP P+ F
Sbjct: 15 LKTLKQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDTF 74
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
M N M+ S+ + N AI ++ M + + +TF VLKAC L + G VH +
Sbjct: 75 MYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNTGSAVHGMV 134
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
++GF ++ V N L+ ++KCG L A +F + DVV+W+S+I+GY + A
Sbjct: 135 LRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVAR 194
Query: 200 VLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
LF M E + ++N +I Y ++G+ +A F E V D+V+WNAMI+G+
Sbjct: 195 KLFNEMP----ERDLVSWNVMITGYVKQGEMESARMLFD----EAPVKDVVSWNAMIAGY 246
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL-HID 318
+AL+LF M +G+ P+ VT+ +L A G ++ G+++HA V + + +
Sbjct: 247 VVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLS 306
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
G+ALIDMY+KCG++K++ +F K+V SWN++I HG S+ LF+ M
Sbjct: 307 TLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQR 366
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
+ NE+T + VL ACSH G +++G + F M Y ++ + H C+VDML R+G +
Sbjct: 367 TKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLK 426
Query: 439 EAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
EA + + + + C +HG +LA E+ F M +V++SN+ A
Sbjct: 427 EAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYA 486
Query: 499 ADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+ GEW AE +RK+M + V K G S VE N
Sbjct: 487 SRGEWDGAEKVRKLMDDSGVTKIRGSSFVEACN 519
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 7/220 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C L GK+VHA + + S L + L+ +YA CG++ + VF I +
Sbjct: 277 LLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDK 336
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQV 135
+V N +++ A G+ +E++ F +M+ N+ TF VL AC +I +G K
Sbjct: 337 DVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYF 396
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV-S 193
++++ E ++ ++DM + GLL A + M E + + W ++++ C V
Sbjct: 397 DLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLAA-CKVHG 455
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA 233
V+ A V E++ + + Y + YA RG+ + A
Sbjct: 456 DVELAKVANEKL-FSMRKDHSGDYVLMSNLYASRGEWDGA 494
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 271/519 (52%), Gaps = 40/519 (7%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ L+ Y G+V+SA +FD++ + +V N M+ G A+ +F M
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVG 651
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ T + AC + + G+ +H + F +V N L+DMYSKCG L A +
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------- 217
F M ++ VVSWTS+I+ Y D+A+ LF M+ +G+ P+ ++
Sbjct: 712 FEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSL 771
Query: 218 ----------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
NA++ YA+ G A+ FS++ V D+V+WN M
Sbjct: 772 DKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIP----VKDIVSWNTM 827
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
I G++++ NEALKLF M +P+ +T+ +L A G +++IGR IH + R G
Sbjct: 828 IGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGY 886
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
++ +ALIDMY KCGSL AR LF++ K++ +W MI G HG+ + +I F++
Sbjct: 887 SSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQK 946
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M G++ +E+T S+L ACSH GL+ +G F SM ++ EHYAC+VD+L R+G
Sbjct: 947 MRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTG 1006
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
+ +AY+L+ +P+ ++ GA GC IH +LA + E FE+ +V+L+N
Sbjct: 1007 NLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLAN 1066
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFV 534
I A +W E + LR+ + ++ ++K PG S +E + +F
Sbjct: 1067 IYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFT 1105
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 263/527 (49%), Gaps = 53/527 (10%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSAR 67
+ L +N +L C + K L++GK VH+++ +N + I L +KLV +Y CG + R
Sbjct: 447 SELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGR 506
Query: 68 LVFDKIPNPN-VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
+FD I + N VF+ N M+ A G+++E+I F M++ N +TFS +LK L
Sbjct: 507 RIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATL 566
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
+ + K++H ++GF + +V N+LI Y K G + SA ++F + +RDVVSW SMI
Sbjct: 567 GRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMI 626
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------------- 217
SG A+ F +M + + + T
Sbjct: 627 SGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFS 686
Query: 218 ------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
N ++ Y++ G+ N A F +M + +V+W ++I+ + + ++A++L
Sbjct: 687 REVMFNNTLLDMYSKCGNLNDAIQAFEKMGQK----TVVSWTSLIAAYVREGLYDDAIRL 742
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F M G+ P+ ++T VL A S+ GR++H + + + + + +AL+DMY+K
Sbjct: 743 FYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAK 802
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
CGS+++A +F +K++ SWN MIG Y K+ + + +++LF M +E R + +T+ +
Sbjct: 803 CGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACL 861
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA-CVVDMLCRSGRMVEA---YDLLRQV 447
L AC +E G I + R G S+ H A ++DM + G +V A +D++ +
Sbjct: 862 LPACGSLAALEIGRGIHGCIL-RNGYS-SELHVANALIDMYVKCGSLVHARLLFDMIPEK 919
Query: 448 PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
+ M +GC +HG + A+ ++ G+ KPD S
Sbjct: 920 DLITWTVMI----SGCGMHGLGNEAIATFQKMRIAGI-KPDEITFTS 961
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 157/281 (55%), Gaps = 13/281 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C +L +G+ VH + N++ + + + L+ +YA CG + A LVF +IP +
Sbjct: 761 VLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKD 820
Query: 78 VFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+ ++W M ++ N EA+ F+ M++ R + T + +L AC L ++ G+ +
Sbjct: 821 I--VSWNTMIGGYSKNSLPNEALKLFAEMQKE-SRPDGITMACLLPACGSLAALEIGRGI 877
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + G+ +++ V NALIDMY KCG L AR +F + E+D+++WT MISG C + +
Sbjct: 878 HGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISG-CGMHGL 936
Query: 196 -DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWN 253
+EA+ F++M++ G++P++ T+ +I+ + + G N + FF+ M +E P L +
Sbjct: 937 GNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYA 996
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
M+ A++ ++A L + M IKP + T+ G L G
Sbjct: 997 CMVDLLARTGNLSKAYNLIETM---PIKP-DATIWGALLCG 1033
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
CLL C AL G+ +H + N + + + L+ +Y CG + ARL+FD IP
Sbjct: 860 CLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEK 919
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQ 134
++ M+ G EAI F MR + ++ TF+ +L AC GLL+ G
Sbjct: 920 DLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWG-F 978
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVS 193
+++ ++ E + ++D+ ++ G L A + M + D W +++ G
Sbjct: 979 FNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCG----C 1034
Query: 194 KVDEAVVLFERM--KLEGLEPNQFTYNAIIAS 223
++ V L E++ + LEP+ Y ++A+
Sbjct: 1035 RIHHDVELAEKVAEHVFELEPDNAGYYVLLAN 1066
>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/567 (30%), Positives = 284/567 (50%), Gaps = 84/567 (14%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
++F SK+V + A G + SAR +FD++P+ + N M+ + + G Q+A+ F M
Sbjct: 4 HLFQTTSKIVAL-AKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHM 62
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC--- 161
R R ++FTF+ L AC GL ++++G ++HA G ++ + VGN+LIDMY KC
Sbjct: 63 RIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSA 122
Query: 162 ----------------------------GLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
GL AR VF GM ++ ++W MISGY
Sbjct: 123 TSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCG 182
Query: 194 KVDEAVVLFERMKLEGLEPNQFT------------------------------------- 216
V+ + LF++M+ + L+P+Q+T
Sbjct: 183 DVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFE 242
Query: 217 ---------YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
+NA+I ++ + GD++ AF F ++ E ++V+W +MI+G+A++ +
Sbjct: 243 SIGILTQVSWNAMIDAHMKIGDTHEAFLVF-QLAPE---KNVVSWTSMITGYARNGHGEQ 298
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
AL F M+ + I+P++ T VL A ++ G+ IH + G H V G+ L++
Sbjct: 299 ALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVN 358
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MY+KCG ++ + T F+ K++ SWNAM+ G HG ++EL+E M+ GM+ ++VT
Sbjct: 359 MYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVT 418
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
I +L CSH GL+EKG +F SM YG+ EH C+VD+L R G + +A +L+ +
Sbjct: 419 FIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDEY 478
Query: 448 PMY--VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
S+ A C H + +GE +K +V+LSN+ G+W E
Sbjct: 479 SRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSGQWKE 538
Query: 506 AENLRKIMKEKNVQKQPGFSRVEKRNE 532
AE +RK M + V+K PG S +E RN+
Sbjct: 539 AEMVRKTMTDHGVKKMPGCSWIEVRNK 565
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+H +F ++ I +K G + AR LF+ K+ +WNAM+ Y + G+ ++ LF
Sbjct: 1 MHSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFH 60
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
M R + T + LSAC+ G + +G++I
Sbjct: 61 HMRIANSRPDRFTFTATLSACAGLGELRRGMKI 93
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/522 (31%), Positives = 273/522 (52%), Gaps = 14/522 (2%)
Query: 19 LLGKCMKSKALRQGKQVHA----LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF---- 70
LL C L + HA LL + + KL+ YA C + A V
Sbjct: 18 LLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACSALPLAHTVLESSS 77
Query: 71 -DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC--NKFTFSIVLKACVGLL 127
D N ++ A + ++A+ F+ MR C + +T+ + LK+C
Sbjct: 78 PDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASK 137
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D+ G Q+H+ ++ + +V V ++ I MYS+CG A RVF GM RDVVSW +MI+
Sbjct: 138 DLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIA 197
Query: 188 GYCNVSKVDEAVVLFER-MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
G+ V D A+ +F++ + L+G P+ T I+ + + F R+
Sbjct: 198 GFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDD--IRFVRRVFDNMQF 255
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
+L++WNAM++ +A ++ +A++LF M ++P+++T+ VL G + +G+ I
Sbjct: 256 KELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRI 315
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H ++ R + ++ +AL+DMY+ CG LKDAR +F++ ++V SW ++I YGKHG
Sbjct: 316 HEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHG 375
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
+++LFE+ML +G+ + + ++VL+ACSH GL+ G F SM RY + EHY C
Sbjct: 376 REAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTC 435
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
+VD+L R+G + EAYD + + + + GA C IH D+ + + F + +
Sbjct: 436 MVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQ 495
Query: 487 PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+V+LSN+ A G W + ++R +M K ++K PG S VE
Sbjct: 496 TGYYVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVE 537
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 181/599 (30%), Positives = 295/599 (49%), Gaps = 103/599 (17%)
Query: 22 KCMKSKALRQGKQVHALLCTNDLNIFSLKS-KLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
+C S L Q+HA L L+ S KL+ YA G S++ VFD P P+ FM
Sbjct: 357 RCATSTTL---TQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFM 413
Query: 81 LNWMVMASAFTGNFQEAIGYFSLMREFIYR----CNKFTFSIVLKACVGLLD-------- 128
++ + G F+EA+ SL E +Y+ + F F VLKAC G D
Sbjct: 414 WGVLIKCYVWGGFFEEAV---SLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNG 470
Query: 129 --------------------------------------------IKKGKQVHAVATQMGF 144
+K+G+ VH +
Sbjct: 471 QASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAM 530
Query: 145 ENDVS-VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
+ ++ +G AL+++Y+ G L +VF + E+ ++SW ++IS + + +EA++LF
Sbjct: 531 DPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFV 590
Query: 204 RMKLEGLEP----------------------------------NQFTYNAIIASYARRGD 229
+M+ +GL P N F NA+I YA+ G
Sbjct: 591 QMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQNALIDMYAKCGF 650
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
++A F ++ + LVTWN+MI GF+Q+ EA+ LF M ++ +K + +T
Sbjct: 651 VHSANKMFEKIKEKS----LVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLS 706
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
V+QA G ++ G+ +H + GL D + +AL DMYSKCG L+ A +F+ ++
Sbjct: 707 VIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERS 766
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ SW+ MI YG HG ++++I LF +ML G++ N++T + +LSACSH G VE+G F
Sbjct: 767 IVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFN 826
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
SM E +GV+ +H+AC+VD+L R+G + AY ++ +P +S+ GA NGC IH R
Sbjct: 827 SMSE-FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRI 885
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
D+ ++ + ++ + +LSNI A +G W + +R +MK K ++K PG+S +E
Sbjct: 886 DIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIE 944
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 281/512 (54%), Gaps = 6/512 (1%)
Query: 28 ALRQGKQVHAL--LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
AL+ GKQ HA+ +C ++ +L S L+ Y+ G + A VF ++ +V N ++
Sbjct: 215 ALQDGKQGHAIAVICGIEMTT-NLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLI 273
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
G +A+ LMR R + T + ++ A + ++K GK+ H + E
Sbjct: 274 SGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLE 333
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+DV V ++++DMY+KC + ARRVF+ +D++ W +M++ + + EA+ LF +M
Sbjct: 334 SDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQM 393
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
+LE + PN ++N++I + G N A F +M + G P+LVTW +ISG A+S
Sbjct: 394 QLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFG 453
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EA+ F+ M +G+KPN V++ GVL A S+QIGR +H + R L++ + ++L
Sbjct: 454 YEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSL 513
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
+DMY+KCG A+ +F++ K + +NAMI + HG ++ L+ + EEG++ +
Sbjct: 514 VDMYAKCGDRDQAKRVFDMIPDKELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDN 573
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
+T + L ACSH +V +GLE+F M + + S EHY C+V +L R G + EA+ L+
Sbjct: 574 ITFTNALYACSHAMMVSEGLELFVDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLIS 633
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
+P + G+ C H + +L + + ++ +V +SN AA G W E
Sbjct: 634 AMPYKPDVQILGSLLAACREHNKIELEEYLSNQLLKLQPDNSGNYVAMSNAYAAAGRWDE 693
Query: 506 AENLRKIMKEKNVQKQPGFSRV---EKRNEFV 534
+ +R++MKE+ ++K PG S + E+ N FV
Sbjct: 694 VKKVRQLMKERGLRKIPGCSWIQVGEELNVFV 725
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 218/461 (47%), Gaps = 59/461 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSL----KSKLVGVYAGCGDVNSARLVFDKIP 74
LL C+ +AL G+Q+HA + IF++ ++KLV YA C + ++ +F ++
Sbjct: 16 LLQGCVYERALHTGRQIHAQIVKKG-AIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVR 74
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NVF ++ + G +QEA+ F M+E + F VLKAC GL I+ GK
Sbjct: 75 LKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKV 134
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + VS G K ++ GM +R+ V+W SMI GY
Sbjct: 135 VHGL---------VSCGYVW-----KMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGL 180
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------------- 223
+EA+ +F M+ EG+EP Q T ++ +++
Sbjct: 181 NEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSS 240
Query: 224 ----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
Y++ G A + FSRM + D+VTWN +ISG+ Q ++AL + M +
Sbjct: 241 LINFYSKVGLIEDAESVFSRMLEK----DVVTWNLLISGYVQIGEVDKALNMCHLMRLEN 296
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
++ ++VT+ ++ A ++++G+E H R L DV S+++DMY+KC + AR
Sbjct: 297 LRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCAR 356
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F + K++ WN M+ + + G ++ LF +M E + N ++ S++ + G
Sbjct: 357 RVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSG 416
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
V + ++F M + GV+ + + ++ L RSG EA
Sbjct: 417 QVNEAKDMFLQM-QSLGVQPNLVTWTTLISGLARSGFGYEA 456
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 203/469 (43%), Gaps = 89/469 (18%)
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+P N N M++ G +EAI F MRE + T S L A L ++ G
Sbjct: 160 MPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDG 219
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
KQ HA+A G E ++G++LI+ YSK GL+ A VF M E+DVV+W +ISGY +
Sbjct: 220 KQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQI 279
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFS--------- 238
+VD+A+ + M+LE L + T +++++A + G + +
Sbjct: 280 GEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVV 339
Query: 239 -----------------RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
R+ DL+ WN M++ FA+ EAL LF M + +
Sbjct: 340 SSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVP 399
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN V + ++LI + G + +A+ +
Sbjct: 400 PN-----------------------------------VISWNSLILGFLNSGQVNEAKDM 424
Query: 342 F----EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
F + N+ +W +I + G +I F+RM E G++ N V++I VL AC +
Sbjct: 425 FLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACIN 484
Query: 398 GGLVEKGLEIFRSMKE---RYGVKISKEHYACVVDMLCRSGRMVEA---YDLL--RQVPM 449
L+I R++ R+ + +S +VDM + G +A +D++ +++P+
Sbjct: 485 LA----SLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPI 540
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
Y N+M F +HG+ A+ + E GL KPD + + A
Sbjct: 541 Y--NAMISGFA----LHGQAVEALALYRCLKEEGL-KPDNITFTNALYA 582
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 273/530 (51%), Gaps = 53/530 (10%)
Query: 10 NLSVNYLDCLLGKCMKSKALRQGKQVHALLCT-NDLNIFSLKSKLVGVYA-GCGDVNSAR 67
NL+ + LD L KS L KQ+ A L T + KL+ ++ AR
Sbjct: 4 NLNEHVLDTL----SKSNHLNHLKQLQAYLTTLGHAHTHFYAFKLIRFCTLTLSNLTYAR 59
Query: 68 LVFDKIPNPNVFMLNWMVMA-SAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVG 125
L+FD IP+ N + M+ A +A A+ F ++R R N F F LK C
Sbjct: 60 LIFDHIPSLNTHLFTAMITAYAAHPATHPSALSLFRHMLRSQPPRPNHFIFPHALKTCP- 118
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC-GLLCSARRVFHGMFERDVVSWTS 184
+ + +HA + GF V AL+D YSK G L +A++VF M +R VVS+T+
Sbjct: 119 --ESCAAESLHAQIVKSGFHEYPVVQTALVDSYSKVSGGLGNAKKVFDEMSDRSVVSFTA 176
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEG 244
M+SG+ AR GD +A F M
Sbjct: 177 MVSGF-----------------------------------ARVGDVESAVRVFGEMLDR- 200
Query: 245 FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
D+ +WNA+I+G Q+ + ++LF+ M+ +PN VTV L A G G +Q+GR
Sbjct: 201 ---DVPSWNALIAGCTQNGAFTQGIELFRRMVFECNRPNGVTVVCALSACGHMGMLQLGR 257
Query: 305 EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHG 364
IH V + GL D F +AL+DMY KCGSL AR +FE+ K + SWN+MI C+ HG
Sbjct: 258 WIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARKVFEMNPEKGLTSWNSMINCFALHG 317
Query: 365 MVDSSIELFERMLE--EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
DS+I +FE+M+E G+R +EVT + +L+AC+HGGLVEKG F M + YG++ E
Sbjct: 318 QSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGGLVEKGYWYFEMMVQEYGIEPQIE 377
Query: 423 HYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM 482
HY C++D+L R+GR EA D+++ + M + G+ NGC +HGR DLA ++ E+
Sbjct: 378 HYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLIEI 437
Query: 483 GLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ML+N+ G+W E N+ + +K++ K PG S +E ++
Sbjct: 438 DPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKSYKVPGCSWIEVDDQ 487
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 9/227 (3%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCG 61
R++F N + + C L C L+ G+ +H + N L S + + LV +Y CG
Sbjct: 227 RMVFECNRPNGVTVVCALSACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCG 286
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE--FIYRCNKFTFSIV 119
+ AR VF+ P + N M+ A G AI F M E R ++ TF +
Sbjct: 287 SLGKARKVFEMNPEKGLTSWNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGL 346
Query: 120 LKACVGLLDIKKGKQVHAVATQ-MGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FER 177
L AC ++KG + Q G E + LID+ + G A V GM E
Sbjct: 347 LNACTHGGLVEKGYWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEP 406
Query: 178 DVVSWTSMISGYCNV-SKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
D V W S+++G C V + D A F KL ++P+ Y ++A+
Sbjct: 407 DEVVWGSLLNG-CKVHGRTDLAE--FAAKKLIEIDPHNGGYRIMLAN 450
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/457 (35%), Positives = 247/457 (54%), Gaps = 40/457 (8%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+ FTF+ VL A +GL DI G+Q+H+ + F +V V NAL+D YSK + AR++F
Sbjct: 209 DSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLF 268
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------- 217
M E+D VS+ +ISGY K A LF ++ + QF +
Sbjct: 269 DEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWE 328
Query: 218 ---------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
N+++ YA+ G A F+ +T VP W AMI
Sbjct: 329 MGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVP----WTAMI 384
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
S + Q E L+LF M + + + T +L+A S+ +G+++H+ + + G
Sbjct: 385 SAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFM 444
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+VF+GSAL+D+Y+KCGS+KDA F+ +N+ SWNAMI Y ++G +++++ F+ M
Sbjct: 445 SNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEM 504
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
+ G++ + V+ + VLSACSH GLVE+GL F SM + Y + +EHYA VVDMLCRSGR
Sbjct: 505 VLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGR 564
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM-GLRKPDGFVMLSN 495
EA L+ ++P+ M + N C IH ++LA ++ F M LR +V +SN
Sbjct: 565 FNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSN 624
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
I AA G+W + K M+++ V+K P +S VE ++E
Sbjct: 625 IYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHE 661
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 164/356 (46%), Gaps = 59/356 (16%)
Query: 32 GKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G+Q+H+ + + N+F + + L+ Y+ V AR +FD++P + N ++ A
Sbjct: 229 GQQIHSFVIKTNFVWNVF-VSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYA 287
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
+ G + A F ++ + +F F+ +L LD + G+Q+HA ++++
Sbjct: 288 WDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL 347
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL-- 207
VGN+L+DMY+KCG A +F + R V WT+MIS Y +E + LF +M+
Sbjct: 348 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQAS 407
Query: 208 ---------------------------------EGLEPNQFTYNAIIASYARRGDSNAAF 234
G N F+ +A++ YA+ G A
Sbjct: 408 VIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 467
Query: 235 AFFSRMTAEGFVPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
F M PD +V+WNAMIS +AQ+ LK FK M++SG++P++V+ GVL
Sbjct: 468 QTFQEM------PDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLS 521
Query: 293 AGGLTGSIQIG-------REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
A +G ++ G +I+ L R + ++++DM + G +A L
Sbjct: 522 ACSHSGLVEEGLWHFNSMTQIYKLDPRREHY------ASVVDMLCRSGRFNEAEKL 571
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 214/495 (43%), Gaps = 57/495 (11%)
Query: 54 VGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEA---------------- 97
VG + G+++ AR +F+K+P+ N N M+ +GN EA
Sbjct: 54 VGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWT 113
Query: 98 --IGYFSLMREF---------IYRC----NKFTFSIVLKACVGLLDIKKGKQVHAVATQ- 141
IG +S + +F + RC + TF +L C G + G Q+ V TQ
Sbjct: 114 ILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH---EMGNQITQVQTQI 170
Query: 142 --MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
+G+++ + VGN L+D Y K L A ++F M E D ++ +++ + +
Sbjct: 171 IKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQ 230
Query: 200 VLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
+ + N F NA++ Y++ A F M + D V++N +ISG+
Sbjct: 231 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQ----DGVSYNVIISGY 286
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
A + A LF+ + + +L T ++GR+IHA ++
Sbjct: 287 AWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEI 346
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
G++L+DMY+KCG ++A +F ++ W AMI Y + G + ++LF +M +
Sbjct: 347 LVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQA 406
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
+ A++ T S+L A + + G ++ S + G + + ++D+ + G + +
Sbjct: 407 SVIADQATFASLLRASASIASLSLGKQL-HSFIIKSGFMSNVFSGSALLDVYAKCGSIKD 465
Query: 440 AYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
A +++P + N+M A+ +G + + +E GL +PD L +
Sbjct: 466 AVQTFQEMPDRNIVSWNAMISAYAQ----NGEAEATLKSFKEMVLSGL-QPDSVSFLGVL 520
Query: 497 CA-------ADGEWH 504
A +G WH
Sbjct: 521 SACSHSGLVEEGLWH 535
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 165/337 (48%), Gaps = 11/337 (3%)
Query: 32 GKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G+Q+HA ++ T D I + + LV +YA CG A ++F + + + + W M SA
Sbjct: 330 GRQIHAQTIVTTADSEIL-VGNSLVDMYAKCGKFEEAEMIFTNLTHRSA--VPWTAMISA 386
Query: 90 FT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ G ++E + F+ MR+ ++ TF+ +L+A + + GKQ+H+ + GF ++
Sbjct: 387 YVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSN 446
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V G+AL+D+Y+KCG + A + F M +R++VSW +MIS Y + + + F+ M L
Sbjct: 447 VFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVL 506
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA-EGFVPDLVTWNAMISGFAQSKREN 266
GL+P+ ++ ++++ + G F+ MT P + +++ +S R N
Sbjct: 507 SGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFN 566
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
EA KL M I P+ + + VL A + + ++ R + M D +
Sbjct: 567 EAEKLMAEM---PIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMS 623
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
++Y+ G ++ + + R + V A KH
Sbjct: 624 NIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKH 660
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 29/228 (12%)
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
++T LQ+ L + + I A + + G D + + + K G L AR LFE
Sbjct: 14 SLTSLASLQSPKL--RLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFE 71
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
KN S N MI Y K G + + +LF+ M+E VT ++ S ++
Sbjct: 72 KMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVER----TAVTWTILIGGYSQLNQFKE 127
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDML--CRSGRM--------VEAYDLLRQVPMYVTN 453
E+F M +R G ++ Y V +L C M + L + V N
Sbjct: 128 AFELFVQM-QRCG---TEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGN 183
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
++ ++ C R DLA + +E E+ D F + +CA G
Sbjct: 184 TLVDSY---CK-SNRLDLACQLFKEMPEI-----DSFTFAAVLCANIG 222
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 269/497 (54%), Gaps = 21/497 (4%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N+ + + L G YA G V+ A ++F ++P NV N M+ A A G +A F M
Sbjct: 102 NVVTWTALLSG-YARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRM 160
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
+ +++I+L V + K +++ E DV ++D ++ G +
Sbjct: 161 PVR----DAGSWNILLAMLVRSGSVDKARELFGRMP----ERDVMAWTTMVDGVARSGNV 212
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
AR +F M ER+VVSW +MISGY ++DEA+ LF +M + + N +I +
Sbjct: 213 DEARLLFDSMPERNVVSWNAMISGYTRNHRLDEALDLFTKMPHRDIA----SCNIMITGF 268
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+ D A F M ++VTW M++G+ + K+ +L LF+GML+SGI+PN
Sbjct: 269 IQNKDLKRARKLFDEMPER----NVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQ 324
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
VT G L A ++ G+++H ++C+ +D F GSAL+++Y+KCG + AR LF++
Sbjct: 325 VTFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDL 384
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+R K++ SWN +I Y HG+ +I L+E+M G R N+VT + +LSACSH GLV++G
Sbjct: 385 SREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEG 444
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY-VTNSMAGAFRNGC 463
L+IF SM + + EHY C++D+ R+GR+ +A L+ + + + S+ A GC
Sbjct: 445 LKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGC 504
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
N HG + + + +LSNI A+ G+W EA +R M + ++KQPG
Sbjct: 505 NAHGNESIGNLAARNLIQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPG 564
Query: 524 FSRVEKRNE---FVEKE 537
S +E N+ FV ++
Sbjct: 565 CSWIEVANKVHVFVARD 581
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 20/278 (7%)
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + +G E ++D+ + G + AR++F G ERDVVSWT+++S Y +
Sbjct: 30 ATSAAVGLERAQDPNRLIVDL-AAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLR 88
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
+A LF+R N T+ A+++ YAR G + A F RM ++V+WN M+
Sbjct: 89 DARSLFDR---SDARRNVVTWTALLSGYARAGLVDEAEVLFQRMPQR----NVVSWNTML 141
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+A + R +A LF M V N+ + +++ +GS+ RE L RM
Sbjct: 142 EAYAVAGRAGDACALFDRMPVRDAGSWNILLAMLVR----SGSVDKARE---LFGRMP-E 193
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
DV + ++D ++ G++ +AR LF+ +NV SWNAMI Y ++ +D +++LF +M
Sbjct: 194 RDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMISGYTRNHRLDEALDLFTKM 253
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
+ + + + + +++ ++F M ER
Sbjct: 254 PHRDIASCNIMITGFIQNKD----LKRARKLFDEMPER 287
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 25/240 (10%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C L +GKQVH ++C + + + S L+ VYA CG+V AR +FD ++
Sbjct: 331 LDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDL 390
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVH 136
N ++ A A G EAI + M+ YR N T+ ++L AC GL+D +G ++
Sbjct: 391 ISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVD--EGLKI- 447
Query: 137 AVATQMGFE---NDVSVG------NALIDMYSKCGLLCSARRVFHGMFERDVVS--WTSM 185
FE ND S+ LID+ S+ G L A+R+ H + + W+++
Sbjct: 448 -------FESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSAL 500
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
+ G CN + L R ++ N TY + YA G A S M G
Sbjct: 501 LGG-CNAHGNESIGNLAARNLIQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGL 559
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 16/196 (8%)
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N +I A + R +A KLF G + V+ T ++ A G + R+ +L R
Sbjct: 44 NRLIVDLAAAGRVWDARKLFDGTPERDV----VSWTALVSAYARRGML---RDARSLFDR 96
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
+V T +AL+ Y++ G + +A LF+ +NV SWN M+ Y G + L
Sbjct: 97 SDARRNVVTWTALLSGYARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACAL 156
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F+RM + + L ++ + G V+K E+F M ER + + +VD +
Sbjct: 157 FDRMPVRDAGSWNILLAMLVRS----GSVDKARELFGRMPERDVMA-----WTTMVDGVA 207
Query: 433 RSGRMVEAYDLLRQVP 448
RSG + EA L +P
Sbjct: 208 RSGNVDEARLLFDSMP 223
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 280/532 (52%), Gaps = 44/532 (8%)
Query: 32 GKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
G+Q+H T + S+ + L+ +Y C + AR +FD + N N +++W M + +
Sbjct: 257 GRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRN--LVSWTTMIAGY 314
Query: 91 TGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
N EA+ F + + ++ + F + +L +C L I +G+QVHA + E+D
Sbjct: 315 MQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDE 374
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
V NALIDMY+KC L AR VF + E D +S+ +MI GY + + AV +F +M+
Sbjct: 375 YVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYC 434
Query: 209 GLEPNQFTYNAIIASYARRGDSNAA-------------------------FAFFSRMTAE 243
L+P+ T+ +++ + R D + ++ FS +
Sbjct: 435 SLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDA 494
Query: 244 GFV------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
V D+V WNAMI G AQ++R EA+KLF + VSG+ PN T ++
Sbjct: 495 KLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTL 554
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
SI G++ HA + + G D +ALIDMY+KCG +++ R LFE T K+V WN+MI
Sbjct: 555 ASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMI 614
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
Y +HG + ++ +F M G+ N VT +SVLSAC+H GLV++GL F SMK +Y V
Sbjct: 615 STYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAV 674
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
+ EHYA VV++ RSG++ A + + ++P+ ++ + + C++ G V +G
Sbjct: 675 EPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGN----VEIGR 730
Query: 478 EFFEMGLRKPDG----FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
EM L V++SNI A+ G W +A+ LR+ M V K+PG+S
Sbjct: 731 YATEMALLADPADSGPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYS 782
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 225/461 (48%), Gaps = 43/461 (9%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L L C +S+A R G+QVH + D N+F + + LV +YA G +++A VFD +
Sbjct: 140 LASALRACAQSRAARFGEQVHGVAAKLGLDANVF-VGTALVNLYAKAGRIDAAMSVFDAL 198
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P N ++ + G A+ F M R ++F + AC GL ++ G+
Sbjct: 199 PARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGR 258
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H A + E+D SV NALID+Y KC L ARR+F M R++VSWT+MI+GY S
Sbjct: 259 QIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNS 318
Query: 194 KVDEAVVLFERMKLEGLEP-----------------------------------NQFTYN 218
EA+ +F ++ G +P +++ N
Sbjct: 319 LDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKN 378
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+I YA+ A A F + + D +++NAMI G+A+ A+++F M
Sbjct: 379 ALIDMYAKCEHLTEARAVFEALAED----DAISYNAMIEGYARLGDLTGAVEIFGKMRYC 434
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+KP+ +T +L +++ ++IH L+ + G +D++ GSALID+YSK + DA
Sbjct: 435 SLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDA 494
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+ +F + + +++ WNAMI ++ + +++LF R+ G+ NE T +++++ S
Sbjct: 495 KLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTL 554
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
+ G + F + + G ++DM + G + E
Sbjct: 555 ASIFHGQQ-FHAQIIKAGADSDPHISNALIDMYAKCGFIEE 594
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 219/449 (48%), Gaps = 52/449 (11%)
Query: 10 NLSVNYLDCLLGKCMKSKALRQG-KQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSA 66
++S L LL C+ LR+ HA + L ++F L + L+ Y+ G + A
Sbjct: 26 HMSGGSLAQLLLSCLAGDRLRRVLPPAHARAVVSGLLPDLF-LANLLLRGYSKLGRLGDA 84
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC------NKFTFSIVL 120
R +FD +P+ N+ + A G +A+ F+ N+F + L
Sbjct: 85 RRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASAL 144
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
+AC + G+QVH VA ++G + +V VG AL+++Y+K G + +A VF + R+ V
Sbjct: 145 RACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPV 204
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAI---------------IASYA 225
+WT++I+GY + A+ LF RM L+G+ P++F + I YA
Sbjct: 205 TWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYA 264
Query: 226 RR--GDSNAA--------FAFFSRMTAEGFVPD------LVTWNAMISGFAQSKRENEAL 269
R +S+A+ + SR+ + D LV+W MI+G+ Q+ + EA+
Sbjct: 265 YRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAM 324
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
+F + +G +P+ T +L + G +I GR++HA V + L D + +ALIDMY
Sbjct: 325 SMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMY 384
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
+KC L +AR +FE + S+NAMI Y + G + ++E+F +M ++ + +T +
Sbjct: 385 AKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFV 444
Query: 390 SVLSACS-----------HGGLVEKGLEI 407
S+L S HG +V+ G +
Sbjct: 445 SLLGVSSSRSDLELSKQIHGLIVKSGTSL 473
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 191/406 (47%), Gaps = 45/406 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C A+ QG+QVHA + DL +K+ L+ +YA C + AR VF+ + +
Sbjct: 345 ILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDD 404
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
N M+ A G+ A+ F MR + + TF +L D++ KQ+H
Sbjct: 405 AISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHG 464
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ + G D+ G+ALID+YSK L+ A+ VF M RD+V W +MI G + +E
Sbjct: 465 LIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEE 524
Query: 198 AVVLFERMKLEGLEPNQFTYNAII----------------ASYARRG---DSNAAFAFFS 238
AV LF R+++ GL PN+FT+ A++ A + G D + + A
Sbjct: 525 AVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALID 584
Query: 239 RMTAEGFV------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
GF+ D++ WN+MIS +AQ EAL +F M +G++PN VT
Sbjct: 585 MYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVT 644
Query: 287 VTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
VL A G + G +++ + + +++++++ + G L A+ E
Sbjct: 645 FVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERM 704
Query: 346 RIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
I+ VA+ W +++ S+ LF +E G A E+ L++
Sbjct: 705 PIEPVATIWRSLL----------SACHLFGN-VEIGRYATEMALLA 739
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 156/348 (44%), Gaps = 50/348 (14%)
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA A G D+ + N L+ YSK G L ARR+F M R++VSW S IS Y +
Sbjct: 53 HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112
Query: 196 DEAVVLFERMKLEG-----------------------------------------LEPNQ 214
D+A++LF G L+ N
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANV 172
Query: 215 FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
F A++ YA+ G +AA + F + A + VTW A+I+G++Q+ + AL+LF
Sbjct: 173 FVGTALVNLYAKAGRIDAAMSVFDALPAR----NPVTWTAVITGYSQAGQAGVALELFGR 228
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M + G++P+ + A G ++ GR+IH R D +ALID+Y KC
Sbjct: 229 MGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSR 288
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
L AR LF+ +N+ SW MI Y ++ + ++ +F ++ + G + + S+L++
Sbjct: 289 LLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNS 348
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRMVEA 440
C + +G ++ + + + + Y ++DM + + EA
Sbjct: 349 CGSLAAIWQGRQVHAHVIK---ADLESDEYVKNALIDMYAKCEHLTEA 393
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 151/312 (48%), Gaps = 31/312 (9%)
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
R + GL P+ F N ++ Y++ G A F M + +LV+W + IS +AQ
Sbjct: 55 RAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSR----NLVSWGSAISMYAQHG 110
Query: 264 RENEALKLFKGMLVSGI------KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
RE++AL LF +G PN + L+A + + + G ++H + ++GL
Sbjct: 111 REDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDA 170
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
+VF G+AL+++Y+K G + A ++F+ +N +W A+I Y + G ++ELF RM
Sbjct: 171 NVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMG 230
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV----DMLCR 433
+G+R + L S SACS G VE G +I Y + + E A VV D+ C+
Sbjct: 231 LDGVRPDRFVLASAASACSGLGFVEGGRQI-----HGYAYRTAAESDASVVNALIDLYCK 285
Query: 434 SGRMVEAYDLLRQVP----MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
R++ A L + + T +AG +N + A++M + + G +PD
Sbjct: 286 CSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTE-----AMSMFWQLSQAGW-QPDV 339
Query: 490 FVMLS--NICAA 499
F S N C +
Sbjct: 340 FACTSILNSCGS 351
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 278/550 (50%), Gaps = 40/550 (7%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C + G Q+H L+ ++ L + S + + L+ +YA CG + AR +FD +P
Sbjct: 253 CVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKT 312
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N M+ G EA F M + + TFS L +++GK++H
Sbjct: 313 DLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIH 372
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ G DV + +ALID+Y KC + AR++F D+V T+MISGY +
Sbjct: 373 CYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNN 432
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
A+ +F + E + N T +AI+
Sbjct: 433 NALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIM 492
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ G + A F ++ + D V WN+MI+ +Q+ + EA+ LF+ M ++G K
Sbjct: 493 DMYAKCGRLDLAHQTFIGISDK----DAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTK 548
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+ V+++ L A ++ G+EIHA + R D+F SALIDMYSKCG+L A +
Sbjct: 549 YDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRV 608
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ KN SWN++I YG HG + S+ LF ML +G++ + VT ++++SAC H G V
Sbjct: 609 FDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQV 668
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
++G+ FR M E G+ EHYAC+VD+ R+GR+ EA+ ++ +P + G
Sbjct: 669 DEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLG 728
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C +HG +LA F++ + +V+LSN+ A G+W +R +MKE+ VQK
Sbjct: 729 ACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKV 788
Query: 522 PGFSRVEKRN 531
PG S ++ N
Sbjct: 789 PGCSWIDVNN 798
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/511 (30%), Positives = 245/511 (47%), Gaps = 63/511 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C L QG+Q HA + N + L +KL+G+Y CG A+ +F ++
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
NWM+ G F A+ ++ M +K+TF V+KAC GL + G+ VH
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
MGFE DV VG++LI YS+ G + AR +F M +D V W M++GY D
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
A +F M+ PN T+ N ++A
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLA 291
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA+ G A F M DLVTWN MISG+ Q+ +EA LF M+ + +KP
Sbjct: 292 MYAKCGHLFDARRLFDMMPKT----DLVTWNGMISGYVQNGFMDEASCLFHEMISARMKP 347
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+++T + L +++ G+EIH + R G+ +DVF SALID+Y KC ++ AR +F
Sbjct: 348 DSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIF 407
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ ++ AMI Y +GM ++++E+F +L+E MRAN VTL SVL AC+
Sbjct: 408 DQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACA------ 461
Query: 403 KGLEIFRSMKERYGVKISKEH------YACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
GL KE +G + H + ++DM + GR+ DL Q + +++ A
Sbjct: 462 -GLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRL----DLAHQTFIGISDKDA 516
Query: 457 GAFRN---GCNIHGRRDLAVTMGEEFFEMGL 484
+ + C+ +G+ + A+ + F +MG+
Sbjct: 517 VCWNSMITSCSQNGKPEEAIDL---FRQMGM 544
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 145/291 (49%), Gaps = 5/291 (1%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C AL GK++H + N + S ++ +YA CG ++ A F I
Sbjct: 453 LASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGIS 512
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ + N M+ + + G +EAI F M + + + S L AC L + GK+
Sbjct: 513 DKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKE 572
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+HA + F +D+ +ALIDMYSKCG L A RVF M E++ VSW S+I+ Y N +
Sbjct: 573 IHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGR 632
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWN 253
+ +++ LF M +G++P+ T+ AII++ G + +F MT E G + + +
Sbjct: 633 LKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYA 692
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
M+ F ++ R NEA + M S P+ +L A L G++++
Sbjct: 693 CMVDLFGRAGRLNEAFGMINSMPFS---PDAGVWGTLLGACRLHGNVELAE 740
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ +LQ + GR+ HA + G+ + G+ L+ MY CG+ DA+ +F R
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+ WN MI + G D ++ + +ML G ++ T V+ AC GGL
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKAC--GGL 160
>gi|118488703|gb|ABK96162.1| unknown [Populus trichocarpa]
Length = 553
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 174/540 (32%), Positives = 283/540 (52%), Gaps = 45/540 (8%)
Query: 27 KALRQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+ L + KQ+HAL+ T+ L +KLV YA D++SAR +FDK P +VF+ N ++
Sbjct: 17 QTLSRTKQLHALVTKTHLLQDPFYATKLVRFYALNNDLSSARNLFDKTPQRSVFLWNSII 76
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
A A F +A ++ M F +K+T++ +++AC + + VH G
Sbjct: 77 RAYAQAHKFDDAFLLYTKMIGFDVIPDKYTYACLIRACCEDFYVDGLRIVHGGVIVSGLG 136
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG--YCNVSKVDEAVVLFE 203
D +AL+ YSK GL+ A +VF G+FE D+V W +MISG YC D+ ++ F
Sbjct: 137 LDSVTCSALVTGYSKMGLVGEASKVFCGVFEPDLVLWNAMISGCGYCGFG--DKGLLFFN 194
Query: 204 RMKLEG-LEPNQFTYNAIIAS-----------------------------------YARR 227
M+ G P+ +T+ A+I+ Y+R
Sbjct: 195 EMRDNGNKRPDGYTFVALISGLANSSSLELGQGIHGLCLKSGFDCNDHVGSSLVSMYSRF 254
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
N A++ F + PDLVTW+A+I+GF+Q+ +AL +K + ++G KP++V +
Sbjct: 255 SCINLAYSVFRSLCQ----PDLVTWSALITGFSQAGEHEKALLFYKNLNLAGKKPDSVLI 310
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
VL A ++ G +IH + R G V SALIDMYSKCG + +FE
Sbjct: 311 ASVLVATAQLANVGPGAQIHGYIVRYGFESHVMVSSALIDMYSKCGFVGLGLRVFENMPN 370
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
+N+ S+N++I G HG+ + ++F ++E+G++ +E T ++L AC H GLV+ G EI
Sbjct: 371 RNIVSYNSIISGLGLHGLASQAFDMFTEIVEKGLKPDESTFSALLCACCHAGLVKDGREI 430
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
FR MK+ + ++ EHY +V +L +G + EAY+ + + V + + GA + C+ HG
Sbjct: 431 FRRMKDEFWIQARTEHYVHIVKLLGMAGELDEAYNFILSLKQPVDSGIWGALLSCCDAHG 490
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
+LA + ++ F+ +K VMLSN+ A DG W + E +R + +K PG SR+
Sbjct: 491 DSELAEIVAQQLFDGEPKKGAYRVMLSNVYAGDGRWVDVEKMRDYITTAGAEKMPGLSRI 550
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 115/231 (49%), Gaps = 5/231 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ S +L G+ +H L + + + S LV +Y+ +N A VF + P+
Sbjct: 212 LISGLANSSSLELGQGIHGLCLKSGFDCNDHVGSSLVSMYSRFSCINLAYSVFRSLCQPD 271
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
++ W + + F+ G ++A+ ++ + + + + VL A L ++ G Q+
Sbjct: 272 --LVTWSALITGFSQAGEHEKALLFYKNLNLAGKKPDSVLIASVLVATAQLANVGPGAQI 329
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + GFE+ V V +ALIDMYSKCG + RVF M R++VS+ S+ISG
Sbjct: 330 HGYIVRYGFESHVMVSSALIDMYSKCGFVGLGLRVFENMPNRNIVSYNSIISGLGLHGLA 389
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
+A +F + +GL+P++ T++A++ + G F RM E ++
Sbjct: 390 SQAFDMFTEIVEKGLKPDESTFSALLCACCHAGLVKDGREIFRRMKDEFWI 440
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 174/562 (30%), Positives = 291/562 (51%), Gaps = 40/562 (7%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLC----TNDLNIFSLKSKLVGVY 57
+R+++ +V +L C + +GK++HA + +D+++ + L+ +Y
Sbjct: 187 HRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDV---GNALITMY 243
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
CGD+++AR++FDK+P + N M+ G E + FS+MRE + T +
Sbjct: 244 VKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMT 303
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
V AC L + + G+ VH + F D+S+ N+LI MYS G L A VF M +
Sbjct: 304 TVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK 363
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
DVVSWT+MI+ + +AV ++ M+LEG+ P++ T +++++ A G +
Sbjct: 364 DVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLH 423
Query: 238 SRMTAEGFVP-------------------------------DLVTWNAMISGFAQSKREN 266
G V ++V+W ++I G + R
Sbjct: 424 EIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSF 483
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
EAL F+ M S +KPN+VT+ VL A G++ G+EIHA R G+ D F +A++
Sbjct: 484 EALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAIL 542
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
DMY +CG A F ++ K+V +WN ++ Y + G ++ELF++MLE + +E+
Sbjct: 543 DMYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEI 601
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T IS+L ACS G+V +GLE F MK +Y + + +HYACVVD+L R+G++ +AYD ++
Sbjct: 602 TFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQD 661
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
+P+ ++ GA N C IH +L + FE + +++L N+ A G W +
Sbjct: 662 MPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKV 721
Query: 507 ENLRKIMKEKNVQKQPGFSRVE 528
+R +M+E+ + PG S VE
Sbjct: 722 SKVRSLMRERGLSADPGCSWVE 743
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 174/538 (32%), Positives = 259/538 (48%), Gaps = 51/538 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C +A +G +V+ L+ ++ + L + L+ ++ G++ A VF K+ +
Sbjct: 103 LLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERD 162
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
VF N +V A G F EA+ + M R N +TF VLK C G+ DI +GK++HA
Sbjct: 163 VFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHA 222
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ GFE+DV VGNALI MY KCG + +AR +F M +RD +SW +MISGY E
Sbjct: 223 HVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLE 282
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
+ LF M+ ++P+ T N++I
Sbjct: 283 GLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQ 342
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y+ G A FSRM ++ D+V+W AMI+ K +A++ +K M + GI P
Sbjct: 343 MYSSLGRLEEAETVFSRMESK----DVVSWTAMIASLVSHKLPFKAVETYKMMELEGILP 398
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ +T+ VL A G + +G +H + + GL V ++LIDMYSKC + +A +F
Sbjct: 399 DEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVF 458
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIE--LFERMLEEGMRANEVTLISVLSACSHGGL 400
KNV SW ++I G + + S E LF R ++E M+ N VTLISVLSAC+ G
Sbjct: 459 RNISGKNVVSWTSLI--LGLR-INNRSFEALLFFRQMKESMKPNSVTLISVLSACARIGA 515
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
+ +G EI + R GV ++DM R GR V A + VT
Sbjct: 516 LMRGKEI-HAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKKDVT--AWNILL 572
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR--KIMKEK 516
G G+ LAV + ++ E+ + PD +S +CA E L IMK K
Sbjct: 573 TGYAQQGQAKLAVELFDKMLELEIH-PDEITFISLLCACSKSGMVTEGLEYFNIMKNK 629
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 167/353 (47%), Gaps = 39/353 (11%)
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
GN ++A+ M E + + +L+ C +G +V+ + + V
Sbjct: 74 LQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVR 133
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+GNAL+ M+ + G L A VF M ERDV SW ++ GY DEA+ L+ RM
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193
Query: 210 LEPNQFTY-----------------------------------NAIIASYARRGDSNAAF 234
+ PN +T+ NA+I Y + GD + A
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F +M D ++WNAMISG+ ++ E L+LF M + P+ +T+T V A
Sbjct: 254 MLFDKMPKR----DRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC 309
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
L + ++GR +H V + D+ ++LI MYS G L++A T+F K+V SW
Sbjct: 310 ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWT 369
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
AMI H + ++E ++ M EG+ +E+TL+SVLSAC+ G ++ G+ +
Sbjct: 370 AMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRL 422
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/561 (31%), Positives = 286/561 (50%), Gaps = 43/561 (7%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C L KC L Q+HA + +L ++F + KL+ ++ C + SA VF+ +P+
Sbjct: 26 CDLHKCTN---LDSVNQIHAQVLKANLHQDLF-VAPKLIAAFSLCRHLASAVNVFNHVPH 81
Query: 76 PNVFMLNWMVMASAFTGNFQEAI--GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
PNV + N ++ A A + + +F + + ++ N FT+ +LKAC G + +
Sbjct: 82 PNVHLYNSIIRAHAHNSSHRSLPFNAFFQMQKNGLFPDN-FTYPFLLKACSGPSSLPLVR 140
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGL--LCSARRVFHGMFERDVVSWTSMISGYCN 191
+HA ++GF D+ V N+LID YS+CG L A +F M ERDVV+W SMI G
Sbjct: 141 MIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVR 200
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP---- 247
++ A LF+ M + + ++N ++ YA+ G+ + AF F RM V
Sbjct: 201 CGELQGACKLFDEMP----DRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTM 256
Query: 248 -----------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
++V W +I+G+A+ EA +L+ M +G++P++
Sbjct: 257 VCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDD 316
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE- 343
+ +L A +G + +G+ IHA + R +A IDMY+KCG L A +F
Sbjct: 317 GFLLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSG 376
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ K+V SWN+MI + HG + ++ELF M++EG + T + +L AC+H GLV +
Sbjct: 377 MMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNE 436
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
G + F SM++ YG+ EHY C++D+L R G + EA+ LLR +PM + G N C
Sbjct: 437 GRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNAC 496
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
+H DLA + E+ F++ P + +LSNI A G+W N+R MK +K G
Sbjct: 497 RMHNDVDLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSG 556
Query: 524 FSRVEKRNEFVEKEVQNESKA 544
S +E E E V ++S
Sbjct: 557 ASSIEVEEEVHEFTVFDQSHP 577
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 19/226 (8%)
Query: 15 YLDCLLGKCMKSKALRQGKQVHALL------C-TNDLNIFSLKSKLVGVYAGCGDVNSAR 67
+L +L C +S L GK++HA + C LN F + +YA CG +++A
Sbjct: 318 FLLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAF------IDMYAKCGCLDAAF 371
Query: 68 LVFD-KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
VF + +V N M+ A G+ ++A+ FS M + + + +TF +L AC
Sbjct: 372 DVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHA 431
Query: 127 LDIKKG-KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTS 184
+ +G K +++ G V ++D+ + G L A + M E + + +
Sbjct: 432 GLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGT 491
Query: 185 MISGYCNVSKVDEAVVLFERM-KLEGLEPNQFTYNAIIASYARRGD 229
+++ + VD A + E++ KLE +P ++ + I YA+ GD
Sbjct: 492 LLNACRMHNDVDLARAVCEQLFKLEPSDPGNYSLLSNI--YAQAGD 535
>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/542 (32%), Positives = 283/542 (52%), Gaps = 41/542 (7%)
Query: 23 CMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C K LR K VH + ++ SL++ L+ +Y C + A+ +F+ + +P+
Sbjct: 213 CGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACW 272
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
M+ + G F+EAI F M+E N T VL C L +K+GK VH +
Sbjct: 273 TSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILR 332
Query: 142 MGFEN-DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ D+ +G AL+D Y+ C + S ++ + VVSW ++IS Y +EA+V
Sbjct: 333 REMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMV 392
Query: 201 LFERMKLEGLEPN----------------------------------QFTYNAIIASYAR 226
LF M +GL P+ +F N+++ Y++
Sbjct: 393 LFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGFADEFVQNSLMDMYSK 452
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G + A+ F ++ + +VTWN MI GF+Q+ EALKLF M + + N VT
Sbjct: 453 CGFVDLAYTIFDKI----WEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVT 508
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+QA +G + G+ IH + G+ D++ +AL+DMY+KCG LK A+ +F
Sbjct: 509 FLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMP 568
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
K+V SW+AMI YG HG + ++ LF +M+E ++ NEVT +++LSAC H G VE+G
Sbjct: 569 EKSVVSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKF 628
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F SM++ YG+ + EH+A +VD+L R+G + AY++++ ++ S+ GA NGC IH
Sbjct: 629 YFNSMRD-YGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASIWGALLNGCRIH 687
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
GR DL + +E E+ + +LSNI A G W+E+ +R M+ ++K PG+S
Sbjct: 688 GRMDLIHNIHKELREIRTNDTGYYTLLSNIYAEGGNWYESRKVRSRMEGMGLKKVPGYSS 747
Query: 527 VE 528
+E
Sbjct: 748 IE 749
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 199/426 (46%), Gaps = 42/426 (9%)
Query: 28 ALRQGKQVHALLCTNDLNIFSLKS-KLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
LR Q+HA L L+ L S KL+ YA G ++S+RLVF+ P+P+ FM ++
Sbjct: 13 TLRSLSQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIK 72
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFT------FSIVLKACVGLLDIKKGKQVHAVAT 140
+ F + + SL I + ++ T + V+KA + + G++VH
Sbjct: 73 CYLWHHLFDQVV---SLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIV 129
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ G D +G +L+ MY + G L AR+VF + RD+VSW+S+++ Y + E +
Sbjct: 130 KTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLE 189
Query: 201 LFERMKLEGLEPNQFTYNAI---------------IASYARR----GDS---NAAFAFFS 238
+ M EG+ P+ T ++ + Y R GD+ N+ +
Sbjct: 190 MLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYG 249
Query: 239 RMT----AEGFV-----PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+ + A+G P W +MIS Q+ EA+ FK M S ++ N VT+
Sbjct: 250 QCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMIS 309
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLH-IDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
VL G ++ G+ +H + R + D+ G AL+D Y+ C + L +
Sbjct: 310 VLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNS 369
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+V SWN +I Y + G+ + ++ LF MLE+G+ + +L S +SAC+ V G +I
Sbjct: 370 SVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIH 429
Query: 409 RSMKER 414
+ +R
Sbjct: 430 GHVTKR 435
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 146/292 (50%), Gaps = 11/292 (3%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
+ C + ++R G+Q+H + +++ L+ +Y+ CG V+ A +FDKI ++
Sbjct: 413 ISACAGASSVRFGQQIHGHVTKRGFADEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIV 472
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLMREFIYRC---NKFTFSIVLKACVGLLDIKKGKQVH 136
N M+ + G EA+ F E + C N+ TF ++AC + KGK +H
Sbjct: 473 TWNCMICGFSQNGISVEALKLFD---EMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIH 529
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
G + D+ + AL+DMY+KCG L +A+ VF+ M E+ VVSW++MI+ Y ++
Sbjct: 530 HKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQIT 589
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
A LF +M ++PN+ T+ I+++ G +F+ M G VP+ + +++
Sbjct: 590 AATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKFYFNSMRDYGIVPNAEHFASIV 649
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG-LTGSIQIGREIH 307
+++ + A ++ K S + + ++ G L G + G + + IH
Sbjct: 650 DLLSRAGDIDGAYEIIK----STCQHIDASIWGALLNGCRIHGRMDLIHNIH 697
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 176/410 (42%), Gaps = 42/410 (10%)
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
++ Q+HA G +D L++ Y++ G L S+R VF D + +I
Sbjct: 14 LRSLSQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKC 73
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQ---FTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
Y D+ V L+ +G Q F Y ++I + + G R+ G
Sbjct: 74 YLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGL 133
Query: 246 -------------------------------VPDLVTWNAMISGFAQSKRENEALKLFKG 274
V DLV+W+++++ + ++ R E L++ +
Sbjct: 134 GTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRW 193
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M+ G+ P++VT+ V +A G G +++ + +H V R + D ++LI MY +C
Sbjct: 194 MVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSY 253
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
L+ A+ +FE + A W +MI ++G + +I+ F++M E + N VT+ISVL
Sbjct: 254 LRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCC 313
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS 454
C+ G +++G + + R + ++D ++ LL + NS
Sbjct: 314 CARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLL----CLIGNS 369
Query: 455 MAGAFRNGCNIHGRRDL---AVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
++ +I+ R L A+ + E GL PD F + S+I A G
Sbjct: 370 SVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLM-PDSFSLASSISACAG 418
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/569 (30%), Positives = 290/569 (50%), Gaps = 44/569 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIP 74
DC+L C + G Q+H L+ + ++ S+K+ L+ +Y+ CG + A +F +
Sbjct: 242 FDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS 301
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ N M+ +G +E++ +F M + TFS +L + +++ KQ
Sbjct: 302 RADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQ 361
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + D+ + +ALID Y KC + A+ +F DVV +T+MISGY +
Sbjct: 362 IHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGL 421
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
+++ +F + + PN+ T A
Sbjct: 422 YIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+I YA+ G N A+ F R++ D+V+WN+MI+ AQS + A+ +F+ M VSG
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKR----DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSG 537
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I + V+++ L A S G+ IH + + L DV++ S LIDMY+KCG+LK A
Sbjct: 538 ICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAM 597
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACSHG 398
+F+ + KN+ SWN++I G HG + S+ LF M+E+ G+R +++T + ++S+C H
Sbjct: 598 NVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHV 657
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
G V++G+ FRSM E YG++ +EHYACVVD+ R+GR+ EAY+ ++ +P + G
Sbjct: 658 GDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGT 717
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C +H +LA + ++ +V++SN A EW +R +MKE+ V
Sbjct: 718 LLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREV 777
Query: 519 QKQPGFSRVE--KRNE-FVEKEVQNESKA 544
QK PG+S +E KR FV +V + +
Sbjct: 778 QKIPGYSWIEINKRTHLFVSGDVNHPESS 806
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 224/482 (46%), Gaps = 67/482 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKS-KLVGVYAGCGDVNSARLVFDKIP 74
L LL C LRQGKQVHA L N ++ S +++G+YA CG + +F ++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 75 NPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ W + S+F N +A+ ++ M F + TF ++KACV L + K
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+ + +G + + V ++LI Y + G + ++F + ++D V W M++GY
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTY----------------------------------- 217
+D + F M+++ + PN T+
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
N++++ Y++ G + A F M+ D VTWN MISG+ QS E+L F M+
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRA----DTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
SG+ P+ +T + +L + +++ ++IH + R + +D+F SALID Y KC +
Sbjct: 334 SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 393
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS- 396
A+ +F +V + AMI Y +G+ S+E+F +++ + NE+TL+S+L
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 397 ----------HGGLVEKGLEIFRSMKERYGVKISKEHYAC-VVDMLCRSGRMVEAYDLLR 445
HG +++KG + ++ + C V+DM + GRM AY++
Sbjct: 454 LLALKLGRELHGFIIKKGFD-------------NRCNIGCAVIDMYAKCGRMNLAYEIFE 500
Query: 446 QV 447
++
Sbjct: 501 RL 502
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 141/552 (25%), Positives = 250/552 (45%), Gaps = 53/552 (9%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCT-----NDLNIFSLKSKLVGVYAGCGDVNSAR 67
V+ CL+ C+ AL+ K + L T D N F + S L+ Y G ++
Sbjct: 138 VSTFPCLVKACV---ALKNFKGIDFLSDTVSSLGMDCNEF-VASSLIKAYLEYGKIDVPS 193
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
+FD++ + + N M+ A G I FS+MR N TF VL C L
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
I G Q+H + G + + S+ N+L+ MYSKCG A ++F M D V+W MIS
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD--------------SNAA 233
GY ++E++ F M G+ P+ T+++++ S ++ + S +
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 234 FAFFSRMTAEGFVP-----------------DLVTWNAMISGFAQSKRENEALKLFKGML 276
F + + + D+V + AMISG+ + ++L++F+ ++
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
I PN +T+ +L G+ ++++GRE+H + + G G A+IDMY+KCG +
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
A +FE +++ SWN+MI + ++I++F +M G+ + V++ + LSAC+
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 397 HGGLVEKGLEIFRSM-KERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVT 452
+ G I M K + E + ++DM + G + A + +++ +
Sbjct: 554 NLPSESFGKAIHGFMIKHSLASDVYSE--STLIDMYAKCGNLKAAMNVFKTMKEKNIVSW 611
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAEN-L 509
NS+ A C HG+ ++ + E E +PD L I C G+ E
Sbjct: 612 NSIIAA----CGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFF 667
Query: 510 RKIMKEKNVQKQ 521
R + ++ +Q Q
Sbjct: 668 RSMTEDYGIQPQ 679
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 174/562 (30%), Positives = 291/562 (51%), Gaps = 40/562 (7%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLC----TNDLNIFSLKSKLVGVY 57
+R+++ +V +L C + +GK++HA + +D+++ + L+ +Y
Sbjct: 187 HRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDV---GNALITMY 243
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
CGD+++AR++FDK+P + N M+ G E + FS+MRE + T +
Sbjct: 244 VKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMT 303
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
V AC L + + G+ VH + F D+S+ N+LI MYS G L A VF M +
Sbjct: 304 TVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK 363
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
DVVSWT+MI+ + +AV ++ M+LEG+ P++ T +++++ A G +
Sbjct: 364 DVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLH 423
Query: 238 SRMTAEGFVP-------------------------------DLVTWNAMISGFAQSKREN 266
G V ++V+W ++I G + R
Sbjct: 424 EIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSF 483
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
EAL F+ M S +KPN+VT+ VL A G++ G+EIHA R G+ D F +A++
Sbjct: 484 EALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAIL 542
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
DMY +CG A F ++ K+V +WN ++ Y + G ++ELF++MLE + +E+
Sbjct: 543 DMYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEI 601
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T IS+L ACS G+V +GLE F MK +Y + + +HYACVVD+L R+G++ +AYD ++
Sbjct: 602 TFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQD 661
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
+P+ ++ GA N C IH +L + FE + +++L N+ A G W +
Sbjct: 662 MPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKV 721
Query: 507 ENLRKIMKEKNVQKQPGFSRVE 528
+R +M+E+ + PG S VE
Sbjct: 722 SKVRSLMRERGLSADPGCSWVE 743
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 174/538 (32%), Positives = 259/538 (48%), Gaps = 51/538 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C +A +G +V+ L+ ++ + L + L+ ++ G++ A VF K+ +
Sbjct: 103 LLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERD 162
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
VF N +V A G F EA+ + M R N +TF VLK C G+ DI +GK++HA
Sbjct: 163 VFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHA 222
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ GFE+DV VGNALI MY KCG + +AR +F M +RD +SW +MISGY E
Sbjct: 223 HVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLE 282
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
+ LF M+ ++P+ T N++I
Sbjct: 283 GLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQ 342
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y+ G A FSRM ++ D+V+W AMI+ K +A++ +K M + GI P
Sbjct: 343 MYSSLGRLEEAETVFSRMESK----DVVSWTAMIASLVSHKLPFKAVETYKMMELEGILP 398
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ +T+ VL A G + +G +H + + GL V ++LIDMYSKC + +A +F
Sbjct: 399 DEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVF 458
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIE--LFERMLEEGMRANEVTLISVLSACSHGGL 400
KNV SW ++I G + + S E LF R ++E M+ N VTLISVLSAC+ G
Sbjct: 459 RNISGKNVVSWTSLI--LGLR-INNRSFEALLFFRQMKESMKPNSVTLISVLSACARIGA 515
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
+ +G EI + R GV ++DM R GR V A + VT
Sbjct: 516 LMRGKEI-HAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKKDVT--AWNILL 572
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR--KIMKEK 516
G G+ LAV + ++ E+ + PD +S +CA E L IMK K
Sbjct: 573 TGYAQQGQAKLAVELFDKMLELEIH-PDEITFISLLCACSKSGMVTEGLEYFNIMKNK 629
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 167/353 (47%), Gaps = 39/353 (11%)
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
GN ++A+ M E + + +L+ C +G +V+ + + V
Sbjct: 74 LQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVR 133
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+GNAL+ M+ + G L A VF M ERDV SW ++ GY DEA+ L+ RM
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193
Query: 210 LEPNQFTY-----------------------------------NAIIASYARRGDSNAAF 234
+ PN +T+ NA+I Y + GD + A
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F +M D ++WNAMISG+ ++ E L+LF M + P+ +T+T V A
Sbjct: 254 MLFDKMPKR----DRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC 309
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
L + ++GR +H V + D+ ++LI MYS G L++A T+F K+V SW
Sbjct: 310 ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWT 369
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
AMI H + ++E ++ M EG+ +E+TL+SVLSAC+ G ++ G+ +
Sbjct: 370 AMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRL 422
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/516 (31%), Positives = 276/516 (53%), Gaps = 45/516 (8%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C + +L GKQ+H + N +I + S +V +YA CG A+ VF + + N
Sbjct: 298 LTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNS 357
Query: 79 FMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++W V+ F G F E++ F+ MR + ++F + ++ C +DI G Q+H
Sbjct: 358 --VSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLH 415
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ + G V V N+LI MY+KCG L +A +F+ M ERD+VSWT MI+
Sbjct: 416 SLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMIT--------- 466
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
+Y++ G+ A FF M+ +++TWNAM+
Sbjct: 467 --------------------------AYSQVGNIAKAREFFDDMSTR----NVITWNAML 496
Query: 257 SGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ Q E + LK++ ML + P+ VT + + G+ ++G +I ++GL
Sbjct: 497 GAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGL 556
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+D +A+I MYSKCG + +AR F+ K++ SWNAMI Y +HGM +IE+F+
Sbjct: 557 ILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDD 616
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
+L +G + + ++ ++VLS CSH GLVE+G F MK + + EH++C+VD+L R+G
Sbjct: 617 ILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAG 676
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
++EA +L+ ++PM T + GA + C HG DLA + F++ G+++L+
Sbjct: 677 HLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAK 736
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+ A G+ ++ +RK+M++K ++K PG+S +E N
Sbjct: 737 MYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNN 772
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 181/410 (44%), Gaps = 73/410 (17%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSAR-LVFDKIPNPN 77
L C AL + +H+ L L ++ L++ L+ Y CG ++ AR L+ D+I PN
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91
Query: 78 VFMLN-----------------------------WMVMASAF--TGNFQEAIGYFSLMRE 106
V N W + S + +G F A+ F MR+
Sbjct: 92 VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQ 151
Query: 107 F-IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
N FTF V+K+C L + Q+ + ++ ++D V AL+DM +CG +
Sbjct: 152 TGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAM- 210
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
D A F R+K P N+++ YA
Sbjct: 211 ------------------------------DFASKQFSRIK----NPTIICRNSMLVGYA 236
Query: 226 RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ + A F M D+V+WN +IS ++S R EAL + M G++P++
Sbjct: 237 KSHGVDHALEIFKSMPER----DVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDST 292
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T T L A S++ G+++H V R HID + SA++++Y+KCG K+A+ +F
Sbjct: 293 TYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSL 352
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
R +N SW +IG + ++G S+ELF +M E M ++ L +++S C
Sbjct: 353 RDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGC 402
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 131/322 (40%), Gaps = 74/322 (22%)
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
L++C + + +H+ +G + V + N L+ Y CG L AR + RD
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLL-----RDE 86
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
++ EPN T+N ++ YA+ G + A F R
Sbjct: 87 IT-----------------------------EPNVITHNIMMNGYAKLGSLSDAVELFGR 117
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK-PNNVTVTGVLQAGGLTG 298
M D+ +WN ++SG+ QS + AL +F M +G PN T V+++ G G
Sbjct: 118 MPTR----DVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALG 173
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN--------- 349
++ ++ L+ + D +AL+DM +CG++ A F +RIKN
Sbjct: 174 WHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQF--SRIKNPTIICRNSM 231
Query: 350 ------------------------VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
V SWN +I K G V ++++ M +G+R +
Sbjct: 232 LVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDS 291
Query: 386 VTLISVLSACSHGGLVEKGLEI 407
T S L+AC+ +E G ++
Sbjct: 292 TTYTSSLTACARLSSLEWGKQL 313
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 276/546 (50%), Gaps = 36/546 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK-LVGVYAGCGDVNSARLVFDKI---- 73
+L C ++ ALR+G+ VHA L+ L L G+YA DV +A V D +
Sbjct: 162 VLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGS 221
Query: 74 -------------------------------PNPNVFMLNWMVMASAFTGNFQEAIGYFS 102
P PNV N ++ + G +EA+G +
Sbjct: 222 VVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVA 281
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M + R + T S +LK+ ++ G ++H + E DV G AL+DMY+KCG
Sbjct: 282 SMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCG 341
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
L A++V + R++ +W S+++GY N + D A+ L E MK L+P+ T+N +I
Sbjct: 342 RLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLIT 401
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y+ G S+ A ++ A G P++V+W ++ISG + ++ M G++P
Sbjct: 402 GYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQP 461
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ VT++ +L+A + G+E+H R D+ +ALIDMYSK GSL A+ +F
Sbjct: 462 SLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIF 521
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E + KN+ NAM+ HG +IELF M G++ + +T ++L+AC GLV
Sbjct: 522 ESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVT 581
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G E F SM+ +YGVK + E+YAC+VD+L R G + EA D + + P+ S GA G
Sbjct: 582 EGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTG 641
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C+IHG LA F + ++++ N+ + + EAE+L+ MK + V +P
Sbjct: 642 CSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRP 701
Query: 523 GFSRVE 528
G+S ++
Sbjct: 702 GWSWIQ 707
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 185/418 (44%), Gaps = 40/418 (9%)
Query: 28 ALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNS-ARLVFDKIPN--PNVFMLNW 83
A R Q+H+L L+ + LV + A G S ARL+ + + + + N
Sbjct: 67 ARRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNK 126
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
V A + EAI F M+ + +T + VL AC +++G+ VHA A ++
Sbjct: 127 HVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLA 186
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
+ V L MY++ + +A RV M VV W ++++ + VD+A+ L
Sbjct: 187 LDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAA 246
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
RM G EPN T+N +++ +R G A + M +G PD
Sbjct: 247 RMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPD--------------- 291
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
TV+ +L++ TG ++ G EIH R L DV+TG+
Sbjct: 292 --------------------ATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGT 331
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
AL+DMY+KCG L A+ + + +N+ +WN+++ Y G D ++EL E M + +
Sbjct: 332 ALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDP 391
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
+ T +++ S G + + + R +K GV + + ++ C +G +++
Sbjct: 392 DITTWNGLITGYSMNGQSSQAVLLLRQIKAA-GVTPNVVSWTSLISGSCHNGEYEDSF 448
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 276/546 (50%), Gaps = 36/546 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK-LVGVYAGCGDVNSARLVFDKI---- 73
+L C ++ ALR+G+ VHA L+ L L G+YA DV +A V D +
Sbjct: 162 VLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGS 221
Query: 74 -------------------------------PNPNVFMLNWMVMASAFTGNFQEAIGYFS 102
P PNV N ++ + G +EA+G +
Sbjct: 222 VVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVA 281
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M + R + T S +LK+ ++ G ++H + E DV G AL+DMY+KCG
Sbjct: 282 SMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCG 341
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
L A++V + R++ +W S+++GY N + D A+ L E MK L+P+ T+N +I
Sbjct: 342 RLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLIT 401
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y+ G S+ A ++ A G P++V+W ++ISG + ++ M G++P
Sbjct: 402 GYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQP 461
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ VT++ +L+A + G+E+H R D+ +ALIDMYSK GSL A+ +F
Sbjct: 462 SLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIF 521
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E + KN+ NAM+ HG +IELF M G++ + +T ++L+AC GLV
Sbjct: 522 ESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVT 581
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G E F SM+ +YGVK + E+YAC+VD+L R G + EA D + + P+ S GA G
Sbjct: 582 EGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTG 641
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C+IHG LA F + ++++ N+ + + EAE+L+ MK + V +P
Sbjct: 642 CSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRP 701
Query: 523 GFSRVE 528
G+S ++
Sbjct: 702 GWSWIQ 707
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 185/418 (44%), Gaps = 40/418 (9%)
Query: 28 ALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNS-ARLVFDKIPN--PNVFMLNW 83
A R Q+H+L L+ + LV + A G S ARL+ + + + + N
Sbjct: 67 ARRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNK 126
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
V A + EAI F M+ + +T + VL AC +++G+ VHA A ++
Sbjct: 127 HVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLA 186
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
+ V L MY++ + +A RV M VV W ++++ + VD+A+ L
Sbjct: 187 LDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAA 246
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
RM G EPN T+N +++ +R G A + M +G PD
Sbjct: 247 RMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPD--------------- 291
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
TV+ +L++ TG ++ G EIH R L DV+TG+
Sbjct: 292 --------------------ATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGT 331
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
AL+DMY+KCG L A+ + + +N+ +WN+++ Y G D ++EL E M + +
Sbjct: 332 ALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDP 391
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
+ T +++ S G + + + R +K GV + + ++ C +G +++
Sbjct: 392 DITTWNGLITGYSMNGQSSQAVLLLRQIKAA-GVTPNVVSWTSLISGSCHNGEYEDSF 448
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 279/554 (50%), Gaps = 44/554 (7%)
Query: 27 KALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+++ G+Q+H + + S+ + LV Y V+SAR VFD++ +V N ++
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
G ++ + F M + T V C I G+ VH++ + F
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+ N L+DMYSKCG L SA+ VF M +R VVS+TSMI+GY EAV LFE M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 206 KLEGLEPNQFTY-----------------------------------NAIIASYARRGDS 230
+ EG+ P+ +T NA++ YA+ G
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTG 289
A FS M V D+++WN +I G++++ NEAL LF +L P+ TV
Sbjct: 449 QEAELVFSEMR----VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 504
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
VL A + GREIH + R G D ++L+DMY+KCG+L A LF+ K+
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ SW MI YG HG +I LF +M + G+ A+E++ +S+L ACSH GLV++G F
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 624
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
M+ ++ + EHYAC+VDML R+G +++AY + +P+ ++ GA GC IH
Sbjct: 625 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 684
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE- 528
LA + E+ FE+ +V+++NI A +W + + LRK + ++ ++K PG S +E
Sbjct: 685 KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744
Query: 529 --KRNEFVEKEVQN 540
+ N FV + N
Sbjct: 745 KGRVNIFVAGDSSN 758
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 162/538 (30%), Positives = 258/538 (47%), Gaps = 48/538 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C SK+L+ GK+V + N I S L SKL +Y CGD+ A VFD++
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
N ++ A +G+F +IG F M + +TFS V K+ L + G+Q+H
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ GF SVGN+L+ Y K + SAR+VF M ERDV+SW S+I+GY + ++
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
+ +F +M + G+E + T N ++
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 339
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y++ GD ++A A F M+ +V++ +MI+G+A+ EA+KLF+ M GI P
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRS----VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ TVT VL + G+ +H + L D+F +AL+DMY+KCGS+++A +F
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 455
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLV 401
R+K++ SWN +IG Y K+ + ++ LF +LEE +E T+ VL AC+
Sbjct: 456 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 402 EKGLEIF-RSMKERYGVKISKEHYA-CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
+KG EI M+ Y S H A +VDM + G ++ A+ L + S
Sbjct: 516 DKGREIHGYIMRNGY---FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWT-VM 571
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENLRKIMKEK 516
G +HG A+ + + + G+ + FV L C+ G E IM+ +
Sbjct: 572 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 190/414 (45%), Gaps = 51/414 (12%)
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
+GN + A+ + + + + T VL+ C +K GK+V GF D ++
Sbjct: 74 SGNLENAVKLLCVSGK--WDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNL 131
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
G+ L MY+ CG L A RVF + + W +++ ++ LF++M G+
Sbjct: 132 GSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGV 191
Query: 211 EPNQFTY-----------------------------------NAIIASYARRGDSNAAFA 235
E + +T+ N+++A Y + ++A
Sbjct: 192 EMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARK 251
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F MT D+++WN++I+G+ + + L +F MLVSGI+ + T+ V
Sbjct: 252 VFDEMTER----DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
+ I +GR +H++ + + + L+DMYSKCG L A+ +F ++V S+ +
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER- 414
MI Y + G+ +++LFE M EEG+ + T+ +VL+ C+ L+++G + +KE
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 415 --YGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGC 463
+ + +S ++DM + G M EA + +R + N++ G + C
Sbjct: 428 LGFDIFVSN----ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 152/282 (53%), Gaps = 13/282 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + + L +GK+VH + NDL +IF + + L+ +YA CG + A LVF ++
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIF-VSNALMDMYAKCGSMQEAELVFSEMRVK 461
Query: 77 NVFMLNWMVMASAFTGN--FQEAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGK 133
++ ++W + ++ N EA+ F+L+ E + ++ T + VL AC L KG+
Sbjct: 462 DI--ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
++H + G+ +D V N+L+DMY+KCG L A +F + +D+VSWT MI+GY
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTW 252
EA+ LF +M+ G+E ++ ++ +++ + + G + + FF+ M E + P + +
Sbjct: 580 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 639
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
++ A++ +A + + M + P + T+ G L G
Sbjct: 640 ACIVDMLARTGDLIKAYRFIENMPI----PPDATIWGALLCG 677
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSG---IKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
N + F +S A+KL + VSG I P T+ VLQ + S++ G+E+
Sbjct: 65 NTQLRRFCESGNLENAVKL---LCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNF 119
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
+ G ID GS L MY+ CG LK+A +F+ +I+ WN ++ K G S
Sbjct: 120 IRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGS 179
Query: 370 IELFERMLEEGMRANEVTLISVLSACS-----HGGLVEKGLEIFRSMKERYGV 417
I LF++M+ G+ + T V + S HGG G + ER V
Sbjct: 180 IGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSV 232
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDKIP 74
C+L C A +G+++H + N FS + + LV +YA CG + A ++FD I
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRN--GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 561
Query: 75 NPNVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIK 130
+ + +++W VM + + G +EAI F+ MR+ ++ +F +L AC GL+D +
Sbjct: 562 SKD--LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD-E 618
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGY 189
+ + + + E V ++DM ++ G L A R M D W +++ G
Sbjct: 619 GWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG- 677
Query: 190 CNVSKVDEAVVLFERM--KLEGLEPNQFTYNAIIAS 223
++ V L E++ K+ LEP Y ++A+
Sbjct: 678 ---CRIHHDVKLAEKVAEKVFELEPENTGYYVLMAN 710
>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
Length = 807
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/519 (29%), Positives = 271/519 (52%), Gaps = 6/519 (1%)
Query: 20 LGKCMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
+ C+ + A + +GKQ HA+ N L + + L + ++ Y G + A ++FD +
Sbjct: 253 VSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMI 312
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+V N ++ G +EAI LMR + + T S ++ A ++K GK+
Sbjct: 313 EKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKE 372
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+ + G E+D+ + + +DMY+KCG + +A++VF ++D++ W +++S Y +
Sbjct: 373 IQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGL 432
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
EA+ LF M+LE + PN T+N II S R G N A F +M + G P+L++W
Sbjct: 433 SGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTT 492
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR-M 313
M++G Q+ EA+ + M SG++PN T+T L A S+ GR IH + R
Sbjct: 493 MMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQ 552
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
++L+DMY+KCG + A +F + +NAMI Y +G V +I L+
Sbjct: 553 QYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLY 612
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
+ + G++ + +T+ S+LSAC++G V + +E+FR M ++G+K EHY +VD+L
Sbjct: 613 RSLEDGGVKPDNITITSLLSACNYGRDVNQAIEVFRDMVSKHGMKPCLEHYGLMVDLLAS 672
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G +A L+ ++P M + C+ + +L + + E +VM+
Sbjct: 673 AGETDKALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMI 732
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
SN A +G W E +R++MK K ++K+PG S ++ + E
Sbjct: 733 SNAYAVEGSWDEVAKMREMMKVKGLKKKPGCSWIQIKGE 771
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 230/464 (49%), Gaps = 37/464 (7%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C+ + L G+Q+HA +L D + +++KLV YA C + A+++F K+
Sbjct: 52 ILQGCVYERDLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRV 111
Query: 76 PNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NVF ++ G + A+ G+ ++ I+ N F V KAC L + G+
Sbjct: 112 RNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDN-FVVPNVCKACGALQWSRFGRG 170
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + G + V V ++L DMY KCG+L AR+VF + +R+ V+W +++ GY
Sbjct: 171 VHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGM 230
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAF------------- 236
+EA+ L M+ EG+EP + T + +++ A G + A A
Sbjct: 231 YEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTS 290
Query: 237 ------------FSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
++ M +G + D+VTWN +ISG+ Q EA+ + + M +K +
Sbjct: 291 ILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFD 350
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
VT++ ++ A T ++++G+EI R GL D+ S +DMY+KCGS+ +A+ +F+
Sbjct: 351 CVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFD 410
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
T K++ WN ++ Y G+ ++ LF M E + N +T ++ + G V +
Sbjct: 411 STVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNE 470
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
E+F M+ G+ + + +++ L ++G EA LR++
Sbjct: 471 AKEMFLQMQSS-GIFPNLISWTTMMNGLVQNGCSEEAILFLRKM 513
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/538 (25%), Positives = 226/538 (42%), Gaps = 89/538 (16%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLN--IFSLKSKLVGVYAGCGD 62
IFP N + N + C + R G+ VH + L+ +F + S L +Y CG
Sbjct: 145 IFPDNFVVPN----VCKACGALQWSRFGRGVHGYVAKAGLHHCVF-VASSLADMYGKCGV 199
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
++ AR VFD IP+ N N +++ G ++EAI S MR+ + T S L A
Sbjct: 200 LDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSA 259
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
+ I++GKQ HA+A G E D +G ++++ Y K GL+ A +F GM E+DVV+W
Sbjct: 260 SANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTW 319
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLE---------------------------------- 208
+ISGY V+EA+ + + M+ E
Sbjct: 320 NLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIR 379
Query: 209 -GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
GLE + + + YA+ G A F + DL+ WN ++S +A S E
Sbjct: 380 HGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQK----DLILWNTLLSAYADSGLSGE 435
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
AL+LF M + + PN +T ++ + G + +E+ + G+
Sbjct: 436 ALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGI------------ 483
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
N+ SW M+ ++G + +I +M E G+R N T
Sbjct: 484 -------------------FPNLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFT 524
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA-----YD 442
+ LSAC + + G I + S +VDM + G + +A
Sbjct: 525 ITVALSACVNLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSK 584
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
L ++P+Y N+M A+ ++G+ A+T+ + G+ KPD + S + A +
Sbjct: 585 LCSELPLY--NAMISAYA----LYGKVREAITLYRSLEDGGV-KPDNITITSLLSACN 635
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 194/409 (47%), Gaps = 43/409 (10%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSI---VLKACVGLLDIKKGKQVHAVATQMG--FEN 146
G +EA+ SL+ E YR + I +L+ CV D+ G+Q+HA + G +
Sbjct: 25 GEIREAL---SLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYAR 81
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
+ + L+ Y+KC L A+ +F + R+V SW ++I C + + A++ F M
Sbjct: 82 NEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEML 141
Query: 207 LEGLEPNQFTYNAIIAS----------------YARRGDSNAAFAFFSRMTAEG------ 244
G+ P+ F + + A+ G + F S G
Sbjct: 142 ENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLD 201
Query: 245 -------FVPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
++PD V WNA++ G+ Q+ EA++L M GI+P VTV+ L A
Sbjct: 202 DARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASA 261
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
G I+ G++ HA+ GL +D G+++++ Y K G ++ A +F+ K+V +WN
Sbjct: 262 NMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNL 321
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
+I Y + G+V+ +I + + M E ++ + VTL +++SA + ++ G EI + R+
Sbjct: 322 LISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEI-QCYCIRH 380
Query: 416 GVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRN 461
G++ + VDM + G +V A +D Q + + N++ A+ +
Sbjct: 381 GLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYAD 429
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 17/188 (9%)
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
+P ++ +S ++ EAL L M I+ +LQ + G++
Sbjct: 8 IPLSTSYFHRVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQ 67
Query: 306 IHALVCRMG--LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
IHA + + G + + + L+ Y+KC +L+ A+ LF R++NV SW A+IG +
Sbjct: 68 IHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRI 127
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE----IF 408
G+ + ++ F MLE G+ + + +V AC HG + + GL +
Sbjct: 128 GLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVA 187
Query: 409 RSMKERYG 416
S+ + YG
Sbjct: 188 SSLADMYG 195
>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 294/546 (53%), Gaps = 50/546 (9%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C + LR + VH + ++ +L + L+ +Y+ CGD+ S+ +F+KI N +
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNA--V 269
Query: 82 NWMVMASAFT-GNFQE-AIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHA 137
+W M S++ G F E A+ FS M + N T VL +C +GL I++GK VH
Sbjct: 270 SWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL--IREGKSVHG 327
Query: 138 VATQMGFE-NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + + N S+ AL+++Y++CG L V + +R++V+W S+IS Y + V
Sbjct: 328 FAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVI 387
Query: 197 EAVVLFERMKLEGLEPNQFTY----------------------------------NAIIA 222
+A+ LF +M + ++P+ FT N++I
Sbjct: 388 QALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLID 447
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y++ G ++A F+++ +VTWN+M+ GF+Q+ EA+ LF M S ++
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRS----VVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 503
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N VT V+QA GS++ G+ +H + GL D+FT +ALIDMY+KCG L A T+F
Sbjct: 504 NEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVF 562
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+++ SW++MI YG HG + S+I F +M+E G + NEV ++VLSAC H G VE
Sbjct: 563 RAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVE 622
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G F MK +GV + EH+AC +D+L RSG + EAY ++++P S+ G+ NG
Sbjct: 623 EGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IH + D+ + + ++ + +LSNI A +GEW E LR MK N++K P
Sbjct: 682 CRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVP 741
Query: 523 GFSRVE 528
G+S +E
Sbjct: 742 GYSAIE 747
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 142/498 (28%), Positives = 243/498 (48%), Gaps = 50/498 (10%)
Query: 28 ALRQGKQVHA-LLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+LR Q+HA LL T L L +KL+ YA G +S+RLVF+ P P+ FM ++
Sbjct: 13 SLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLI 72
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD-IKKGKQVHAVATQMGF 144
+ + AI + + + +KF F VL+AC G + + G +VH + G
Sbjct: 73 KCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGV 132
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
++D + +L+ MY + G L A +VF GM RD+V+W++++S +V +A+ +F+
Sbjct: 133 DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKC 192
Query: 205 MKLEGLEPNQFTY-----------------------------------NAIIASYARRGD 229
M +G+EP+ T N+++ Y++ GD
Sbjct: 193 MVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGD 252
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
++ F ++ + + V+W AMIS + + + +AL+ F M+ SGI+PN VT+
Sbjct: 253 LLSSERIFEKIAKK----NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYS 308
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS-ALIDMYSKCGSLKDARTLFEITRIK 348
VL + GL G I+ G+ +H R L + + S AL+++Y++CG L D T+ + +
Sbjct: 309 VLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDR 368
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
N+ +WN++I Y GMV ++ LF +M+ + ++ + TL S +SAC + GLV G +I
Sbjct: 369 NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIH 428
Query: 409 RSMKERYGVKISKEHYA-CVVDMLCRSGRMVEAYDLLRQV---PMYVTNSMAGAFRNGCN 464
+ +S E ++DM +SG + A + Q+ + NSM F N
Sbjct: 429 GHVIR---TDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGN 485
Query: 465 IHGRRDLAVTMGEEFFEM 482
L M + EM
Sbjct: 486 SVEAISLFDYMYHSYLEM 503
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 149/551 (27%), Positives = 263/551 (47%), Gaps = 45/551 (8%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKA-LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAG 59
+RL+ +S +L C S+ L G +VH + ++ + +++ L+ +Y
Sbjct: 89 HRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQ 148
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
G+++ A VFD +P ++ + +V + G +A+ F M + + T V
Sbjct: 149 TGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISV 208
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
++ C L ++ + VH T+ F+ D ++ N+L+ MYSKCG L S+ R+F + +++
Sbjct: 209 VEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNA 268
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-----YARRGDSNAAF 234
VSWT+MIS Y ++A+ F M G+EPN T ++++S R G S F
Sbjct: 269 VSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGF 328
Query: 235 AF--------------FSRMTAE-GFVPD------------LVTWNAMISGFAQSKRENE 267
A + AE G + D +V WN++IS +A +
Sbjct: 329 AVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQ 388
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
AL LF+ M+ IKP+ T+ + A G + +G++IH V R + D F ++LID
Sbjct: 389 ALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLID 447
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MYSK GS+ A T+F + ++V +WN+M+ + ++G +I LF+ M + NEVT
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVT 507
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY--ACVVDMLCRSGRMVEAYDLLR 445
++V+ ACS G +EKG + + + + K+ + ++DM + G + A + R
Sbjct: 508 FLAVIQACSSIGSLEKG----KWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFR 563
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICAADGEW 503
+ S + N +HGR A++ + E G KP+ V ++ + C G
Sbjct: 564 AMSSRSIVSWSSMI-NAYGMHGRIGSAISTFNQMVESG-TKPNEVVFMNVLSACGHSGSV 621
Query: 504 HEAENLRKIMK 514
E + +MK
Sbjct: 622 EEGKYYFNLMK 632
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 176/379 (46%), Gaps = 43/379 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C +R+GK VH +L N SL LV +YA CG ++ V + +
Sbjct: 309 VLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDR 368
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N+ N ++ A G +A+G F M + + FT + + AC + GKQ+H
Sbjct: 369 NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIH 428
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ ++ V N+LIDMYSK G + SA VF+ + R VV+W SM+ G+
Sbjct: 429 GHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSV 487
Query: 197 EAVVLFERMKLEGLEPNQ----------------------------------FTYNAIIA 222
EA+ LF+ M LE N+ FT A+I
Sbjct: 488 EAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALID 547
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA+ GD NAA F M++ +V+W++MI+ + R A+ F M+ SG KP
Sbjct: 548 MYAKCGDLNAAETVFRAMSSRS----IVSWSSMINAYGMHGRIGSAISTFNQMVESGTKP 603
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA-RTL 341
N V VL A G +GS++ G+ L+ G+ + + ID+ S+ G LK+A RT+
Sbjct: 604 NEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTI 663
Query: 342 FEITRIKNVASWNAMI-GC 359
E+ + + + W +++ GC
Sbjct: 664 KEMPFLADASVWGSLVNGC 682
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 277/544 (50%), Gaps = 43/544 (7%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNI---FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
C +R G VH L L I ++ + LV +Y+ CG + AR +FD NV
Sbjct: 309 CAAVGEVRMGMVVHGL--AFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVV 366
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLM----REFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
N ++ + G+F+ G F L+ RE R N+ T VL AC G + K++
Sbjct: 367 SWNTIIWGYSKEGDFR---GVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEI 423
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H A + GF D V NA + Y+KC L A RVF GM + V SW ++I +
Sbjct: 424 HGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFP 483
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARR-----GDSNAAFAFFSRMTAEGFV---- 246
+++ LF M G++P++FT +++ + AR G F + + + F+
Sbjct: 484 GKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISL 543
Query: 247 ----------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
LV WN MI+GF+Q++ EAL F+ ML GIKP
Sbjct: 544 MSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQE 603
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
+ VTGVL A ++++G+E+H+ + L D F ALIDMY+KCG ++ ++ +F+
Sbjct: 604 IAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDR 663
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
K+ A WN +I YG HG +IELFE M +G R + T + VL AC+H GLV +G
Sbjct: 664 VNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEG 723
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
L+ M+ YGVK EHYACVVDML R+G++ EA L+ ++P + + + + C
Sbjct: 724 LKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCR 783
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
+G ++ + ++ E+ K + +V+LSN+ A G+W E +R+ MKE + K G
Sbjct: 784 NYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGC 843
Query: 525 SRVE 528
S +E
Sbjct: 844 SWIE 847
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 234/500 (46%), Gaps = 58/500 (11%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSA 66
+++S + LL C K + G++VHAL+ + N L ++++ +Y+ CG + +
Sbjct: 88 SDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDS 147
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVG 125
R VFD ++F+ N ++ + F++AI F L+ + FT V KAC G
Sbjct: 148 RGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAG 207
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
+ D++ G+ VHA+A + G +D VGNALI MY KCG + SA +VF M R++VSW S+
Sbjct: 208 VADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSV 267
Query: 186 ISGYCNVSKVDEAVVLFERMKL---EGLEPNQFTYNAIIASYA-----RRGDSNAAFAFF 237
+ E +F+R+ + EGL P+ T +I + A R G AF
Sbjct: 268 MYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFK 327
Query: 238 SRMTAE--------------GFV------------PDLVTWNAMISGFAQSKRENEALKL 271
+T E G++ ++V+WN +I G+++ +L
Sbjct: 328 LGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFEL 387
Query: 272 FKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
+ M ++ N VTV VL A + +EIH R G D +A + Y+
Sbjct: 388 LQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYA 447
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
KC SL A +F K V+SWNA+IG + ++G S++LF M++ GM + T+ S
Sbjct: 448 KCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGS 507
Query: 391 VLSACS-----------HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
+L AC+ HG ++ GLE + E G+ + + C +L G+++
Sbjct: 508 LLLACARLKFLRCGKEIHGFMLRNGLE----LDEFIGISLMSLYIQCSSMLL---GKLI- 559
Query: 440 AYDLLRQVPMYVTNSMAGAF 459
+D + + N M F
Sbjct: 560 -FDKMENKSLVCWNVMITGF 578
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 167/521 (32%), Positives = 284/521 (54%), Gaps = 39/521 (7%)
Query: 28 ALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAG--CGDVNSARLVFDKIPNPNVFMLNWM 84
A ++ +Q+HA L T N + S+L+ +Y+ D+ AR +FD+I + +++W
Sbjct: 28 APQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRS--LIHWN 85
Query: 85 VMASAFTGNFQEAIGYFSLMREFI--YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
+ + N Q + L E + Y + FT V+K C L +++GKQ+H +A ++
Sbjct: 86 TIIKCYVEN-QFSHDGIVLFHELVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKI 144
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
GF +DV V +L++MYSKCG + AR+VF GM ++DVV W S+I G
Sbjct: 145 GFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDG-------------- 190
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
N ++NA+I Y + GD ++A F +M + DLVTWN MI+G+ +
Sbjct: 191 ----------NLVSWNAMINGYMKSGDFDSALELFYQMP----IWDLVTWNLMIAGYELN 236
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
+ +A+K+F ML G +P++ T+ VL A + GR IH+ + + G +D G
Sbjct: 237 GQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILG 296
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
++LI+MY+KCG ++ A T+F + K V W A+I G HGM + ++ LF M + G++
Sbjct: 297 TSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLK 356
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
N + I VL+AC+H GLV+ G + F M Y ++ + EHY C+VD+LCR+G + EA +
Sbjct: 357 PNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKN 416
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
+ +P+ + + G HG+ D+ + E+ +++LSN+ AA G
Sbjct: 417 TIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGM 476
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVEKR---NEFVEKEVQN 540
W + ++R++M ++ +K PG S VE + +EF+ ++ +
Sbjct: 477 WEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISH 517
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 146/334 (43%), Gaps = 49/334 (14%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L C++ C + +++GKQ+H L ++F ++ LV +Y+ CG+++ AR VFD +
Sbjct: 118 LPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVF-VQGSLVNMYSKCGEIDCARKVFDGM 176
Query: 74 PNPNVFMLN----------------------------------------WMVMASAF--T 91
+ +V + N W +M + +
Sbjct: 177 IDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELN 236
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G F +A+ F +M + R + T VL A GL + KG+ +H+ + GFE D +G
Sbjct: 237 GQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILG 296
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
+LI+MY+KCG + SA VF + ++ V WT++I G + A+ LF M GL+
Sbjct: 297 TSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLK 356
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALK 270
PN + ++ + G + +F M E + P L + ++ ++ EA
Sbjct: 357 PNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKN 416
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
+ M +S PN V +L G I IG
Sbjct: 417 TIENMPIS---PNKVIWMSLLGGSRNHGKIDIGE 447
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 171/512 (33%), Positives = 268/512 (52%), Gaps = 45/512 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAG--CGDVNSARLVFDKIPN 75
LL +C + LRQ +H + L + + SKL+ A G + AR VFD+I
Sbjct: 24 LLQRCSNMEELRQ---IHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
PN FM N M+ + + +EA+ + M N +TF +LKAC + +++ +Q+
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQI 140
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA +MGF +++ N+L+++YSK G + SAR +F + +RD VSW SMI G
Sbjct: 141 HAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDG------- 193
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
Y + G+ A+ F+ M ++++W +M
Sbjct: 194 ----------------------------YTKCGEIEMAYEIFNHMPER----NIISWTSM 221
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
ISG + + EAL LF M +GIK +NV + LQA G + G+ IHA + + +
Sbjct: 222 ISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEI 281
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
ID G LIDMY+KCG L++A +F K V+ W AMI Y HG ++E F +
Sbjct: 282 EIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMK 341
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M G+ N++T +L+ACSH GLV + +F SM+ +G K S EHY C+VD+L R+G
Sbjct: 342 MQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAG 401
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
+ EA +L+ +P+ ++ GA N C+IHG +L +G+ ++ ++ L++
Sbjct: 402 LLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLAS 461
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
I AA GEW++A +R+ MKE+ V K PG S +
Sbjct: 462 IHAAAGEWNQAARVRRQMKEQGVSKLPGCSVI 493
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 159/496 (32%), Positives = 269/496 (54%), Gaps = 20/496 (4%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N+ + + L G YA G V+ A +F ++P NV N M+ A G ++A F M
Sbjct: 97 NVVTWTALLSG-YARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGM 155
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
+ +++I+L A V ++ K +++ E +V ++ ++ G +
Sbjct: 156 PVR----DAGSWNILLAALVRSGNMDKARKLFDRMP----ERNVMAWTTMVAGIARSGSV 207
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
AR +F GM ER+VVSW +MISGY ++DEA LF +M + ++N +I +
Sbjct: 208 DEARALFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIA----SWNIMITGF 263
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+ D A F +M +++TW M++G+ QS + AL++F GMLV GI+PN
Sbjct: 264 IQDRDLERAQDLFDKMPRR----NVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQ 319
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
VT G + A + G+++H ++C+ D F S L+++Y+KCG ++ AR +F++
Sbjct: 320 VTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDL 379
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
++ K+V SWN MI Y HG+ +I L+E+M E+G + N+VT + +LSACSH GLV++G
Sbjct: 380 SKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEG 439
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
L IF M + + + EHY C++D+ R+GR+ +A L+ + + ++++ A GCN
Sbjct: 440 LRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCN 499
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
HG + E + +L NI A+ G+W EA +R M ++ ++KQPG
Sbjct: 500 SHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGC 559
Query: 525 SRVEKRNE---FVEKE 537
S +E N+ FV ++
Sbjct: 560 SWIEVENKVHVFVSRD 575
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 181/386 (46%), Gaps = 43/386 (11%)
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVF-HGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
+ DV AL+ Y++ G+L AR +F R+VV+WT+++SGY +VDEA LF+
Sbjct: 63 DRDVVSWTALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFQ 122
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
RM E N ++N ++ +Y G A+ F M V D +WN +++ +S
Sbjct: 123 RMP----ERNVVSWNTMLEAYTSAGRVRDAWTLFDGMP----VRDAGSWNILLAALVRSG 174
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGG----------------------LTGSIQ 301
++A KLF M + V G+ ++G ++G +
Sbjct: 175 NMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERNVVSWNAMISGYAR 234
Query: 302 IGR--EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
R E H L +M D+ + + +I + + L+ A+ LF+ +NV +W M+
Sbjct: 235 NHRIDEAHDLFMKMPTR-DIASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNG 293
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
Y + ++++++F ML EG+R N+VT + + ACS+ + +G ++ + M + +
Sbjct: 294 YLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQ-MICKTSFQF 352
Query: 420 SKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
+ ++++ + G + A +DL ++ + N M A+ + HG A+ +
Sbjct: 353 DTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAH----HGVGVEAIHLY 408
Query: 477 EEFFEMGLRKPD-GFVMLSNICAADG 501
E+ E G + D +V L + C+ G
Sbjct: 409 EKMQEKGYKPNDVTYVGLLSACSHSG 434
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 125/256 (48%), Gaps = 19/256 (7%)
Query: 159 SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYN 218
+ G + ARR+F +RDVVSWT++++ Y + +A LF+R N T+
Sbjct: 46 AAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDR---PDARRNVVTWT 102
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+++ YAR G + A A F RM ++V+WN M+ + + R +A LF GM V
Sbjct: 103 ALLSGYARAGRVDEAEALFQRMPER----NVVSWNTMLEAYTSAGRVRDAWTLFDGMPVR 158
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
N+ + ++++G + + L RM +V + ++ ++ GS+ +A
Sbjct: 159 DAGSWNILLAALVRSGNMD-------KARKLFDRMP-ERNVMAWTTMVAGIARSGSVDEA 210
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
R LF+ +NV SWNAMI Y ++ +D + +LF +M + + + + +
Sbjct: 211 RALFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRD-- 268
Query: 399 GLVEKGLEIFRSMKER 414
+E+ ++F M R
Sbjct: 269 --LERAQDLFDKMPRR 282
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 105/231 (45%), Gaps = 14/231 (6%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C L +G+QVH ++C + ++S L+ +YA CG++ AR VFD +V
Sbjct: 329 CSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISW 388
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHAVA 139
N M+ A A G EAI + M+E Y+ N T+ +L AC GL+D +G ++
Sbjct: 389 NGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVD--EGLRIFEYM 446
Query: 140 TQMGFENDVSVGNA----LIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSK 194
+ + ++V + LID+ S+ G L A+R+ H + E W +++ G CN
Sbjct: 447 VK---DRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGG-CNSHG 502
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
+ L R LE N TY + YA G A S M G
Sbjct: 503 NESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGL 553
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 122/294 (41%), Gaps = 35/294 (11%)
Query: 233 AFAFFSRMTA----EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
A AFF A G V D N ++ A + R ++A +LF + V+ T
Sbjct: 18 AAAFFYDSAAAVDVSGHVQDP---NRRVAELAAAGRVSDARRLFDRTPDRDV----VSWT 70
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
++ A G + R AL R +V T +AL+ Y++ G + +A LF+ +
Sbjct: 71 ALVAAYARQGMLHDAR---ALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFQRMPER 127
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV-LSACSHGGLVEKGLEI 407
NV SWN M+ Y G V + LF +GM + ++ L+A G ++K ++
Sbjct: 128 NVVSWNTMLEAYTSAGRVRDAWTLF-----DGMPVRDAGSWNILLAALVRSGNMDKARKL 182
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCN 464
F M ER + + +V + RSG + EA L +P + N+M +
Sbjct: 183 FDRMPERNVMA-----WTTMVAGIARSGSVDEARALFDGMPERNVVSWNAMISGYARNHR 237
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
I DL F +M R + ++ D + A++L M +NV
Sbjct: 238 IDEAHDL-------FMKMPTRDIASWNIMITGFIQDRDLERAQDLFDKMPRRNV 284
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 284/558 (50%), Gaps = 50/558 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C S+AL G+++H+L+ T D S+ + LV +Y CG + A LVF ++P P
Sbjct: 443 ILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLP 502
Query: 77 NVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ ++ W VM A+ N +EA G M + + +F+ VL +C ++ +
Sbjct: 503 SRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYC---SQEAQV 559
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+ + G+ + + ALI M+ +C L AR VF M DVVSWT+M+S
Sbjct: 560 LRMCILESGYRS-ACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRD 618
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
E LF RM+LEG+ P++FT NA
Sbjct: 619 FKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENA 678
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ Y+ GD A +FF M A DLV+WN M + +AQ+ EA+ LF+ M + G
Sbjct: 679 LLNMYSNCGDWREALSFFETMKAR----DLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEG 734
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+KP+ +T + L G + + G+ H L GL DV + L+ +Y+KCG L +A
Sbjct: 735 VKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAI 794
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+LF V NA+IG +HG + ++++F +M +EG+R + TL+S++SAC H G
Sbjct: 795 SLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAG 854
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
+VE+G F +MKE +G+ + EHYAC VD+L R+G++ A ++R++P + +
Sbjct: 855 MVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSL 914
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C + G +L + E+ V+LSNI A G+W +A+ RK + ++NV+
Sbjct: 915 LGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVK 974
Query: 520 KQPGFSRVE---KRNEFV 534
PG S +E + +EFV
Sbjct: 975 NAPGMSWLEIGKQVHEFV 992
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 237/488 (48%), Gaps = 49/488 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C+ S L +GK+ H L+ L ++F L + L+ +Y CG + A +F K+
Sbjct: 31 LLQSCVDSNDLAKGKRAHELIANAGLEQHLF-LGNCLINMYVRCGSLEEAHAIFSKMEER 89
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
NV ++ A+A +G F A F +++ E N +T +L AC D+ G+ +
Sbjct: 90 NVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSI 149
Query: 136 HAVATQMGFENDVS----VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
HA+ ++G E + + VGNA+I+MY+KCG A VF + E+DVVSWT+M Y
Sbjct: 150 HAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQ 209
Query: 192 VSKV-DEAVVLFERMKLEGLEPNQFTY--------------------------------N 218
+ +A+ +F M L+ L PN T+ N
Sbjct: 210 ERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGLGFDPLAGN 269
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+I Y + GD A+ F M + + DLV+WNAMIS ++ R +A+ +F+ + +
Sbjct: 270 ALINMYGKCGDWEGAYGVFKAMASRQEL-DLVSWNAMISASVEAGRHGDAMAIFRRLRLE 328
Query: 279 GIKPNNVTVTGVLQAGGLTG-SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G++PN+VT+ +L A +G R+ H + G DV G+A+I MY+KCG
Sbjct: 329 GMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSA 388
Query: 338 ARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
A T+F R K +V SWN M+G + F ML G+ N+V+ I++L+ACS
Sbjct: 389 AWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACS 448
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP-----MYV 451
+ ++ G +I + R + +V M + G + EA + +++P +
Sbjct: 449 NSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVT 508
Query: 452 TNSMAGAF 459
N M GA+
Sbjct: 509 WNVMLGAY 516
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 202/430 (46%), Gaps = 58/430 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVG-----VYAGCGDVNSARLVF 70
L +L C S+ L G+ +HA++ L S + LVG +YA CG A VF
Sbjct: 130 LVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVF 189
Query: 71 DKIPNPNVFMLNWMVMASAFTGN---FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
IP +V ++W MA A+ + +A+ F M N TF L AC L
Sbjct: 190 LTIPEKDV--VSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLR 247
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER---DVVSWTS 184
D G +H++ + G D GNALI+MY KCG A VF M R D+VSW +
Sbjct: 248 D---GTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNA 304
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------- 217
MIS + +A+ +F R++LEG+ PN T
Sbjct: 305 MISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWES 364
Query: 218 ---------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
NAII+ YA+ G +AA+ F R+ + D+++WN M+ K +
Sbjct: 365 GYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIR---WKCDVISWNTMLGASEDRKSFGKV 421
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV-CRMGLHIDVFTGSALID 327
+ F ML++GI PN V+ +L A + ++ GR+IH+L+ R +++ + L+
Sbjct: 422 VNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVS 481
Query: 328 MYSKCGSLKDARTLFEITRI--KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
MY KCGS+ +A +F+ + +++ +WN M+G Y ++ + ML+ G+ +
Sbjct: 482 MYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDA 541
Query: 386 VTLISVLSAC 395
++ SVLS+C
Sbjct: 542 LSFTSVLSSC 551
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 51/329 (15%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
++ +L++CV D+ KGK+ H + G E + +GN LI+MY +CG L A +F M
Sbjct: 28 YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE-GLEPNQFTY----------------- 217
ER+VVSWT++IS A LF M LE PN +T
Sbjct: 88 ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 218 ----------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
NA+I YA+ G A A F + + D+V+W AM
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEK----DVVSWTAM 203
Query: 256 ISGFAQSKR-ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
+AQ +R +AL++F+ ML+ + PN +T L G S++ G +H+L+ G
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITAL---GACTSLRDGTWLHSLLHEAG 260
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK---NVASWNAMIGCYGKHGMVDSSIE 371
L D G+ALI+MY KCG + A +F+ + ++ SWNAMI + G ++
Sbjct: 261 LGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMA 320
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGL 400
+F R+ EGMR N VTLI++L+A + G+
Sbjct: 321 IFRRLRLEGMRPNSVTLITILNALAASGV 349
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 123/242 (50%), Gaps = 18/242 (7%)
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
D+ +T+++ + + + + E + GLE + F N +I Y R G A A F
Sbjct: 24 DLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGL 296
S+M ++V+W A+IS AQS A LF+ ML+ S PN+ T+ +L A
Sbjct: 84 SKMEER----NVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACAN 139
Query: 297 TGSIQIGREIHALVCRMGLHIDVFT----GSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
+ + IGR IHA++ +GL + T G+A+I+MY+KCGS +DA +F K+V S
Sbjct: 140 SRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVS 199
Query: 353 WNAMIGCYGKH-GMVDSSIELFERMLEEGMRANEVTLISVLSACS--------HGGLVEK 403
W AM G Y + ++ +F ML + + N +T I+ L AC+ H L E
Sbjct: 200 WTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEA 259
Query: 404 GL 405
GL
Sbjct: 260 GL 261
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 279/554 (50%), Gaps = 44/554 (7%)
Query: 27 KALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+++ G+Q+H + + S+ + LV Y V+SAR VFD++ +V N ++
Sbjct: 58 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 117
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
G ++ + F M + T V C I G+ VH++ + F
Sbjct: 118 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 177
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+ N L+DMYSKCG L SA+ VF M +R VVS+TSMI+GY EAV LFE M
Sbjct: 178 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 237
Query: 206 KLEGLEPNQFTY-----------------------------------NAIIASYARRGDS 230
+ EG+ P+ +T NA++ YA+ G
Sbjct: 238 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 297
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTG 289
A FS M V D+++WN +I G++++ NEAL LF +L P+ TV
Sbjct: 298 QEAELVFSEMR----VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 353
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
VL A + GREIH + R G D ++L+DMY+KCG+L A LF+ K+
Sbjct: 354 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 413
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ SW MI YG HG +I LF +M + G+ A+E++ +S+L ACSH GLV++G F
Sbjct: 414 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 473
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
M+ ++ + EHYAC+VDML R+G +++AY + +P+ ++ GA GC IH
Sbjct: 474 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 533
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE- 528
LA + E+ FE+ +V+++NI A +W + + LRK + ++ ++K PG S +E
Sbjct: 534 KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 593
Query: 529 --KRNEFVEKEVQN 540
+ N FV + N
Sbjct: 594 KGRVNIFVAGDSSN 607
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 230/486 (47%), Gaps = 47/486 (9%)
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
FD++ N ++ A +G+F +IG F M + +TFS V K+ L +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
G+Q+H + GF SVGN+L+ Y K + SAR+VF M ERDV+SW S+I+GY
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------------- 217
+ ++ + +F +M + G+E + T
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 218 ---NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
N ++ Y++ GD ++A A F M+ +V++ +MI+G+A+ EA+KLF+
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRS----VVSYTSMIAGYAREGLAGEAVKLFEE 236
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M GI P+ TVT VL + G+ +H + L D+F +AL+DMY+KCGS
Sbjct: 237 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 296
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLS 393
+++A +F R+K++ SWN +IG Y K+ + ++ LF +LEE +E T+ VL
Sbjct: 297 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 356
Query: 394 ACSHGGLVEKGLEIF-RSMKERYGVKISKEHYA-CVVDMLCRSGRMVEAYDLLRQVPMYV 451
AC+ +KG EI M+ Y S H A +VDM + G ++ A+ L +
Sbjct: 357 ACASLSAFDKGREIHGYIMRNGY---FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 413
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENLR 510
S G +HG A+ + + + G+ + FV L C+ G E
Sbjct: 414 LVSWT-VMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF 472
Query: 511 KIMKEK 516
IM+ +
Sbjct: 473 NIMRHE 478
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 152/282 (53%), Gaps = 13/282 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + + L +GK+VH + NDL +IF + + L+ +YA CG + A LVF ++
Sbjct: 252 VLNCCARYRLLDEGKRVHEWIKENDLGFDIF-VSNALMDMYAKCGSMQEAELVFSEMRVK 310
Query: 77 NVFMLNWMVMASAFTGN--FQEAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGK 133
++ ++W + ++ N EA+ F+L+ E + ++ T + VL AC L KG+
Sbjct: 311 DI--ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 368
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
++H + G+ +D V N+L+DMY+KCG L A +F + +D+VSWT MI+GY
Sbjct: 369 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 428
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTW 252
EA+ LF +M+ G+E ++ ++ +++ + + G + + FF+ M E + P + +
Sbjct: 429 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 488
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
++ A++ +A + + M + P + T+ G L G
Sbjct: 489 ACIVDMLARTGDLIKAYRFIENMPI----PPDATIWGALLCG 526
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 182/401 (45%), Gaps = 57/401 (14%)
Query: 23 CMKSKALRQGKQVHAL---LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
C S+ + G+ VH++ C + + F + L+ +Y+ CGD++SA+ VF ++ + +V
Sbjct: 155 CADSRLISLGRAVHSIGVKACFSREDRFC--NTLLDMYSKCGDLDSAKAVFREMSDRSVV 212
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
M+ A G EA+ F M E + +T + VL C + +GK+VH
Sbjct: 213 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 272
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
+ D+ V NAL+DMY+KCG + A VF M +D++SW ++I GY +EA+
Sbjct: 273 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEAL 332
Query: 200 VLFERMKLEG-LEPNQFTY-----------------------------------NAIIAS 223
LF + E P++ T N+++
Sbjct: 333 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 392
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
YA+ G A F + ++ DLV+W MI+G+ EA+ LF M +GI+ +
Sbjct: 393 YAKCGALLLAHMLFDDIASK----DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEAD 448
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALV---CRMGLHIDVFTGSALIDMYSKCGSLKDART 340
++ +L A +G + G ++ C++ ++ + + ++DM ++ G L A
Sbjct: 449 EISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY--ACIVDMLARTGDLIKAYR 506
Query: 341 LFEITRIKNVAS-WNAMI-GCYGKHGMVDSSIELFERMLEE 379
E I A+ W A++ GC H ++L E++ E+
Sbjct: 507 FIENMPIPPDATIWGALLCGCRIHH-----DVKLAEKVAEK 542
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDKIP 74
C+L C A +G+++H + N FS + + LV +YA CG + A ++FD I
Sbjct: 353 CVLPACASLSAFDKGREIHGYIMRN--GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 410
Query: 75 NPNVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIK 130
+ + +++W VM + + G +EAI F+ MR+ ++ +F +L AC GL+D +
Sbjct: 411 SKD--LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD-E 467
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGY 189
+ + + + E V ++DM ++ G L A R M D W +++ G
Sbjct: 468 GWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG- 526
Query: 190 CNVSKVDEAVVLFERM--KLEGLEPNQFTYNAIIAS 223
++ V L E++ K+ LEP Y ++A+
Sbjct: 527 ---CRIHHDVKLAEKVAEKVFELEPENTGYYVLMAN 559
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1724
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 278/542 (51%), Gaps = 37/542 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C+ KA +QG +H L TN + L +KL+ Y GDV +AR VFD +P +
Sbjct: 36 ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
V ++W M S ++ G F++A FS MR + N+FT+ L+AC L + G QV
Sbjct: 96 V--VSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQV 153
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
+ F ++ V +AL+D +SKCG + A +F M ERDVVSW +MI GY
Sbjct: 154 QGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFA 213
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF---------- 245
D++ +F M GL P+ +T +++ + A G A +T G+
Sbjct: 214 DDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLL 273
Query: 246 ---------------------VPDLVTWNAMISGFAQSKREN-EALKLFKGMLVSGIKPN 283
DL + A+I+G+A + +AL LFK M I +
Sbjct: 274 INAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMD 333
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+V + +L S +G +IHA + DV G+ALIDMY+K G ++DA+ F+
Sbjct: 334 DVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFD 393
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
KNV SW ++I Y KHG ++ L+++M +G + N+VT +S+L ACSH GL +
Sbjct: 394 EMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAE 453
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
G E F +M +Y +K EHY+C+VD+ R G + EAY+LL ++ + S+ GA
Sbjct: 454 GCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGAS 513
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
+I+G L F M +V+L++I +A G W +A +RK+M+E++ +K G
Sbjct: 514 SIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAG 573
Query: 524 FS 525
+S
Sbjct: 574 YS 575
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/541 (28%), Positives = 265/541 (48%), Gaps = 41/541 (7%)
Query: 29 LRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+ G+ +H L+ L+ + + L+ +Y+ G A LVF + ++ N M+
Sbjct: 1064 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 1123
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
G + + + + + N TF+ L AC + + K VHA+ GF +
Sbjct: 1124 YVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDF 1183
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK- 206
+ VGNAL+ MY K G++ A++V M + D V+W ++I G+ + +EAV ++ ++
Sbjct: 1184 LIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 1243
Query: 207 -----------------------------------LEGLEPNQFTYNAIIASYARRGDSN 231
L G E + + N++I YA+ GD N
Sbjct: 1244 KGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLN 1303
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
++ F + + +TWNAM++ A EALK+F M G+ + + +G L
Sbjct: 1304 SSNYIFDGLGNK----SPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGL 1359
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A ++ G+++H LV ++G D+ +A +DMY KCG + D + ++
Sbjct: 1360 AATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRL 1419
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SWN +I + +HG + E F ML+ G + + VT +S+LSAC+HGGLV++GL + SM
Sbjct: 1420 SWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSM 1479
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
+GV EH C++D+L RSGR+ A ++++P+ + + C IHG +L
Sbjct: 1480 TREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLEL 1539
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
A E E+ +V+ SN+CA G+W + ENLRK M N++KQP S V+ ++
Sbjct: 1540 ARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKD 1599
Query: 532 E 532
+
Sbjct: 1600 K 1600
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 218/454 (48%), Gaps = 42/454 (9%)
Query: 32 GKQVHALLCTNDLNIFSLKSK-LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
GK +HA +N+ ++ L+ +Y+ G++ AR VFD++ + N +W M S +
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRN--EASWSTMLSGY 820
Query: 91 --TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHAVATQMGFEN 146
G ++EA+G F M N F + ++ AC G + +G QVH + G
Sbjct: 821 VRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYM-ADEGFQVHGFVVKTGILG 879
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
DV VG AL+ Y GL+ +A+++F M + +VVSWTS++ GY + E + +++RM+
Sbjct: 880 DVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMR 939
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP------------------- 247
EG+ NQ T+ + +S D + + GF
Sbjct: 940 QEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 999
Query: 248 ------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
D+++WNAMIS +A E+L+ F M + N+ T++ +L
Sbjct: 1000 EACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCS 1059
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
+++ GR IH LV ++GL +V + L+ +YS+ G +DA +F+ +++ SWN+
Sbjct: 1060 SVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNS 1119
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG-LVEKGLEIFRSMKER 414
M+ CY + G +++ +L+ G N VT S L+ACS+ L+E +I ++
Sbjct: 1120 MMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES--KIVHALIIV 1177
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
G +V M + G M+EA +L+ +P
Sbjct: 1178 AGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP 1211
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 203/427 (47%), Gaps = 42/427 (9%)
Query: 19 LLGKCMKSKAL-RQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L+ C +S + +G QVH + T L + + LV Y G V +A+ +F+++P+
Sbjct: 851 LITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDH 910
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV +++ + +GN E + + MR+ N+ TF+ V +C L D G QV
Sbjct: 911 NVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVL 970
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
Q GFE+ VSV N+LI M+S + A VF M E D++SW +MIS Y +
Sbjct: 971 GHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCR 1030
Query: 197 EAVVLFERMKLE-----------------------------------GLEPNQFTYNAII 221
E++ F M+ GL+ N N ++
Sbjct: 1031 ESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLL 1090
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y+ G S A F MT DL++WN+M++ + Q + + LK+ +L G
Sbjct: 1091 TLYSEAGRSEDAELVFQAMTER----DLISWNSMMACYVQDGKCLDGLKILAELLQMGKV 1146
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
N+VT L A + + +HAL+ G H + G+AL+ MY K G + +A+ +
Sbjct: 1147 MNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 1206
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS-HGGL 400
+ + +WNA+IG + ++ + +++ ++ + E+G+ AN +T++SVL ACS L
Sbjct: 1207 LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDL 1266
Query: 401 VEKGLEI 407
++ G+ I
Sbjct: 1267 LKHGMPI 1273
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 224/499 (44%), Gaps = 59/499 (11%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
S+ + L+ +++ V A VFD + ++ N M+ A A G +E++ F MR
Sbjct: 983 SVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHL 1042
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
N T S +L C + ++K G+ +H + ++G +++V + N L+ +YS+ G A
Sbjct: 1043 HNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDA 1102
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------- 217
VF M ERD++SW SM++ Y K + + + + G N T+
Sbjct: 1103 ELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNP 1162
Query: 218 -------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
NA++ Y + G A M PD VTW
Sbjct: 1163 ECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQ----PDRVTW 1218
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS-IQIGREIHALVC 311
NA+I G A+++ NEA+K +K + GI N +T+ VL A ++ G IHA +
Sbjct: 1219 NALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIV 1278
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
G D + ++LI MY+KCG L + +F+ K+ +WNAM+ HG + +++
Sbjct: 1279 LTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALK 1338
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
+F M G+ ++ + L+A ++ ++E+G ++ + + G + +DM
Sbjct: 1339 IFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQL-HGLVIKLGFESDLHVTNAAMDMY 1397
Query: 432 CRSGRMVEAYDLLRQVPMYVTNS------MAGAF-RNGCNIHGRRDLAVTMGEEFFEMGL 484
+ G M +D+L+ +P + S + AF R+GC R E ++G
Sbjct: 1398 GKCGEM---HDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETF-----HEMLKLG- 1448
Query: 485 RKPD--GFVMLSNICAADG 501
KPD FV L + C G
Sbjct: 1449 PKPDHVTFVSLLSACNHGG 1467
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 151/300 (50%), Gaps = 8/300 (2%)
Query: 11 LSVNYLD--CLLGKC-MKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSA 66
+ NY+ +LG C L+ G +HA ++ T + +K+ L+ +YA CGD+NS+
Sbjct: 1246 IPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSS 1305
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
+FD + N + N MV A+A G +EA+ F MR ++F+FS L A L
Sbjct: 1306 NYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANL 1365
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
+++G+Q+H + ++GFE+D+ V NA +DMY KCG + ++ R +SW +I
Sbjct: 1366 AVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILI 1425
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GF 245
S + +A F M G +P+ T+ +++++ G + A++ MT E G
Sbjct: 1426 SAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGV 1485
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
P + +I +S R + A K M V PN++ +L A + G++++ R+
Sbjct: 1486 FPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPV---PPNDLAWRSLLAACRIHGNLELARK 1542
>gi|147801011|emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
Length = 711
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 281/550 (51%), Gaps = 39/550 (7%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLV 69
L Y + +L C+ KA +QG +H L TN + L +KL+ Y GDV +AR V
Sbjct: 151 LESKYYEGIL--CIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNV 208
Query: 70 FDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
FD +P +V ++W M S ++ G F++A FS MR + N+FT+ L+AC L
Sbjct: 209 FDGMPERSV--VSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLR 266
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+ G QV + F ++ V +AL+D +SKCG + A +F M ERDVVSW +MI
Sbjct: 267 CLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIG 326
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF-- 245
GY D++ +F M GL P+ +T +++ + A G A +T G+
Sbjct: 327 GYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGS 386
Query: 246 -----------------------------VPDLVTWNAMISGFAQSKREN-EALKLFKGM 275
DL + A+I+G+A + +AL LFK M
Sbjct: 387 YDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEM 446
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
I ++V + +L S +G +IHA + DV G+ALIDMY+K G +
Sbjct: 447 NQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEI 506
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+DA+ F+ KNV SW ++I Y KHG ++ L+++M +G + N+VT +S+L AC
Sbjct: 507 EDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFAC 566
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH GL +G E F +M +Y +K EHY+C+VD+ R G + EAY+LL ++ + S+
Sbjct: 567 SHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASL 626
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
GA +I+G L F M +V+L++I +A G W +A +RK+M+E
Sbjct: 627 WGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEE 686
Query: 516 KNVQKQPGFS 525
++ +K G+S
Sbjct: 687 RSTKKNAGYS 696
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 171/539 (31%), Positives = 279/539 (51%), Gaps = 59/539 (10%)
Query: 28 ALRQGKQVHALLCTNDLNI---------FSLKSK-----LVGVYAGCGDVNSARLVFDKI 73
A+ G+Q+H + +D ++ FS KS ++ Y G++ A+ +FD++
Sbjct: 166 AVELGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRM 225
Query: 74 PNPNVFM--LNWMVMASAFTGN--FQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLD 128
V ++W M S + F EA F L++E I + FT VL C +
Sbjct: 226 EQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGI-EPDSFTLGSVLAGCADMAS 284
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
I++GK+ H++A G +++ VG AL++MYSKC + +A+ F G+ ERD+ +W
Sbjct: 285 IRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTW------ 338
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
NA+I+ YAR + +M +GF P+
Sbjct: 339 -----------------------------NALISGYARCNQAEKIRELHQKMRRDGFEPN 369
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
+ TWN +I+G+ ++K+ + A++LF M ++ ++P+ TV +L A +IQ G+++HA
Sbjct: 370 VYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHA 429
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
R G DV G+AL+DMY+KCG +K ++ + N+ S NAM+ Y HG +
Sbjct: 430 YSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEE 489
Query: 369 SIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
I LF RML +R + VT ++VLS+C H G +E G E M Y V S +HY C+V
Sbjct: 490 GIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALMVA-YNVMPSLKHYTCMV 548
Query: 429 DMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
D+L R+G++ EAY+L++ +P A GC IH DL E+ E+ P
Sbjct: 549 DLLSRAGQLYEAYELIKNLPTEADAVTWNALLGGCFIHNEVDLGEIAAEKLIELEPNNPG 608
Query: 489 GFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE---FVEKEVQNESKA 544
+VML+N+ A+ G+WH R++MK+ +QK+PG S +E R+ FV K++ + S +
Sbjct: 609 NYVMLANLYASAGKWHYLTQTRQLMKDMGMQKRPGCSWIEDRDGIHVFVAKDIYHTSTS 667
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 169/385 (43%), Gaps = 61/385 (15%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
T++ +L +C + GKQ+HA + + GF V L+ MY++ +A VF M
Sbjct: 53 TYASILDSCGSPI---LGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVFDTM 109
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEP--NQFTYNAIIA---------- 222
R++ SWT+++ Y + +EA LFE++ EG+ + F + ++
Sbjct: 110 PLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVEL 169
Query: 223 -------SYARRGDSNAAFAFFS-------------------------------RMTAEG 244
+ GD +AF FS RM EG
Sbjct: 170 GRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEG 229
Query: 245 FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
D ++WN+MISG+ +EA LF+ +L GI+P++ T+ VL SI+ G+
Sbjct: 230 VQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGK 289
Query: 305 EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHG 364
E H+L GL + G AL++MYSKC + A+ F+ +++ +WNA+I Y +
Sbjct: 290 EAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCN 349
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK------ERYGVK 418
+ EL ++M +G N T +++ + +++F M+ + Y V
Sbjct: 350 QAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVG 409
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDL 443
I AC + G+ V AY +
Sbjct: 410 IILA--ACSRLATIQRGKQVHAYSI 432
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 136/296 (45%), Gaps = 36/296 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C ++R+GK+ H+L L S+ LV +Y+ C D+ +A++ FD +
Sbjct: 272 LGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVS 331
Query: 75 -----------------------------------NPNVFMLNWMVMASAFTGNFQEAIG 99
PNV+ N ++ + A+
Sbjct: 332 ERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAMQ 391
Query: 100 YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYS 159
F+ M+ R + +T I+L AC L I++GKQVHA + + G ++DV +G AL+DMY+
Sbjct: 392 LFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDMYA 451
Query: 160 KCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNA 219
KCG + RV++ + ++VS +M++ Y +E + LF RM + P+ T+ A
Sbjct: 452 KCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLA 511
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
+++S G + M A +P L + M+ +++ + EA +L K +
Sbjct: 512 VLSSCVHAGSLEIGHECLALMVAYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKNL 567
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 7/214 (3%)
Query: 19 LLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + +++GKQVHA + +D ++ + + LV +YA CGDV V++ I NP
Sbjct: 411 ILAACSRLATIQRGKQVHAYSIRAGHDSDVH-IGAALVDMYAKCGDVKHCYRVYNMISNP 469
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N+ N M+ A A G+ +E I F M R + TF VL +CV ++ G +
Sbjct: 470 NLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECL 529
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKV 195
A+ + ++D+ S+ G L A + + E D V+W +++ G ++V
Sbjct: 530 ALMVAYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKNLPTEADAVTWNALLGGCFIHNEV 589
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIAS-YARRG 228
D + E KL LEPN ++A+ YA G
Sbjct: 590 DLGEIAAE--KLIELEPNNPGNYVMLANLYASAG 621
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P++ T +L + GS +G+++HA + G + F + L+ MY++ S ++A
Sbjct: 48 PPSSTTYASILDS---CGSPILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACH 104
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+F+ ++N+ SW A++ Y + G + + LFE++L EG+R
Sbjct: 105 VFDTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVR 146
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 266/519 (51%), Gaps = 47/519 (9%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFI 108
+ L+ Y+ G+V+ AR VFD I + M++W M + + N ++E++ F+ MR
Sbjct: 175 TALIDAYSVRGNVDVARHVFDDICCKD--MVSWTGMVACYAENCFYEESLQLFNQMRIMG 232
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
Y+ N FT S LK+C+GL GK VH A + +++D+ VG AL+++Y+K G + A+
Sbjct: 233 YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQ 292
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
R+F M + D++ W+ MI+ Y + EA+ LF RM+ + PN FT+
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSV 352
Query: 218 ------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDL--VT 251
NAI+ YA+ G+ + F + PD VT
Sbjct: 353 SLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEEL------PDRNDVT 406
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
WN +I G+ Q A+ LF ML ++P VT + VL+A +++ G +IH+L
Sbjct: 407 WNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTI 466
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
+ + D ++LIDMY+KCG + DAR F+ ++ SWNAMI Y HGM ++
Sbjct: 467 KTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALN 526
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LF+ M + N++T + VLSACS+ GL+ KG F SM + Y +K EHY C+V +L
Sbjct: 527 LFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLL 586
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
R GR EA L+ ++ + + A C IH + DL + EM V
Sbjct: 587 GRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHV 646
Query: 492 MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+LSN+ A G W +RK M++K V+K+PG S VE +
Sbjct: 647 LLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQ 685
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 223/463 (48%), Gaps = 52/463 (11%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
N D + GK + L++G L++F+ ++ L+ Y + A +FD++
Sbjct: 47 NGADPIAGKHLHCHILKRG---------TSLDLFA-QNILLNFYVQSNSLQDASKLFDEM 96
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P N + + F +A+ + + + + N F F+ +LK V +
Sbjct: 97 PQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCW 156
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+HA ++G D VG ALID YS G + AR VF + +D+VSWT M++ Y
Sbjct: 157 TLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENC 216
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYN----------------------------------- 218
+E++ LF +M++ G +PN FT +
Sbjct: 217 FYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGI 276
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A++ YA+ G+ A F M DL+ W+ MI+ +AQS R EAL LF M +
Sbjct: 277 ALLELYAKSGEIIDAQRLFEEMPK----TDLIPWSLMIARYAQSDRSKEALDLFLRMRQT 332
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+ PNN T VLQA + S+ +G++IH+ V + GL+ +VF +A++D+Y+KCG ++++
Sbjct: 333 SVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENS 392
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
LFE +N +WN +I Y + G + ++ LF MLE M+ EVT SVL A +
Sbjct: 393 MKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASL 452
Query: 399 GLVEKGLEIFR-SMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+E GL+I ++K Y + ++DM + GR+ +A
Sbjct: 453 AALEPGLQIHSLTIKTMYNKDTVVAN--SLIDMYAKCGRINDA 493
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 163/318 (51%), Gaps = 8/318 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN--IFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C S +L GKQ+H+ + LN +F + + ++ VYA CG++ ++ +F+++P+
Sbjct: 344 VLQACASSVSLDLGKQIHSCVLKFGLNSNVF-VSNAIMDVYAKCGEIENSMKLFEELPDR 402
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N N +++ G+ + A+ F+ M E + + T+S VL+A L ++ G Q+H
Sbjct: 403 NDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIH 462
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ + + D V N+LIDMY+KCG + AR F M +RD VSW +MI GY
Sbjct: 463 SLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSM 522
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAM 255
EA+ LF+ M+ +PN+ T+ ++++ + G A F M+ + + P + + M
Sbjct: 523 EALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCM 582
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ + R +EA+KL + +P+ + +L A + + +GR V M
Sbjct: 583 VWLLGRLGRFDEAMKLIGEI---AYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEP 639
Query: 316 HIDVFTGSALIDMYSKCG 333
H D T L +MY+ G
Sbjct: 640 HDDA-THVLLSNMYATAG 656
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 17/246 (6%)
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
G + F N ++ Y + A F M + +++ + G+++ + ++A
Sbjct: 65 GTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQ----TNTISFVTLAQGYSRDHQFHQA 120
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L + G + N T +L+ + +HA V ++G H D F G+ALID
Sbjct: 121 LHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDA 180
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
YS G++ AR +F+ K++ SW M+ CY ++ + S++LF +M G + N T+
Sbjct: 181 YSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTI 240
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYG--VKISKEHYACV----VDMLCRSGRMVEAYD 442
L +C GLE F K +G +K +H V +++ +SG +++A
Sbjct: 241 SGALKSC-------LGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQR 293
Query: 443 LLRQVP 448
L ++P
Sbjct: 294 LFEEMP 299
>gi|116312013|emb|CAJ86370.1| OSIGBa0117N13.14 [Oryza sativa Indica Group]
gi|116312056|emb|CAJ86420.1| H0303G06.9 [Oryza sativa Indica Group]
Length = 559
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 177/554 (31%), Positives = 287/554 (51%), Gaps = 42/554 (7%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI--FSLKSKLVGVYAGCGDVNSARLV 69
+ + LL C+ S A RQGK VH + + L +KL+ YA GDV +AR +
Sbjct: 10 TAPFYSSLLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLIIFYARFGDVAAARKM 69
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
FD +P+ +V MV A G +EA+ F+LMR R N+FT+ AC G
Sbjct: 70 FDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCA 129
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
+ G+QVHA A + F D+ V +AL+DM+ +CG + AR++F M ++DVVSW ++I G+
Sbjct: 130 RSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGF 189
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------------- 217
+A+ LF M E + P+ +T
Sbjct: 190 VERGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEK 249
Query: 218 ---NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE-ALKLFK 273
++I SYA+ ++A + ++ PDLV+ A+ISG+ + +E A++LF
Sbjct: 250 VVIGSLINSYAKCRSMSSARVIYDSISE----PDLVSSTALISGYTMDRNYSEDAMELFC 305
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
+ G+ + V ++ VL S + G +IHA +C+ D+ +AL+DMY+K G
Sbjct: 306 KIHRKGLWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQSMGDIALDNALVDMYAKAG 365
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
DA+ F+ +NV SW ++I G++G + ++ LF RM+E+G+R N+VT +S+LS
Sbjct: 366 EFSDAKRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLS 425
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
AC H GL KG+E F SM RYG+ EHY+ +D+L R G++ +A+ L+++ + +
Sbjct: 426 ACGHCGLTNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNS 485
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIM 513
SM GA C +HG L T + F + + +L+N+ A W +A+ R+++
Sbjct: 486 SMLGAMLGACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVI 545
Query: 514 KEKNVQKQPGFSRV 527
E K+ GFS +
Sbjct: 546 DETTDGKEVGFSVI 559
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 175/536 (32%), Positives = 283/536 (52%), Gaps = 34/536 (6%)
Query: 32 GKQVHALLCT-NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
G+Q HAL+ + + + LVG+Y G V VF +P N + + MV A
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 91 TGNFQEAIGYFSL-MREFIYRCNK-FTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
G +EAI F+L +RE + + F+ VL + + + G+Q+H + + G V
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
++ NAL+ MYSKC L A ++F +R+ ++W++M++GY + EAV LF RM
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 209 GLEPNQFTYNAIIAS-----YARRGDSNAAFAF---FSR----MTA-------------- 242
G++P+++T ++ + Y G +F F R TA
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 243 -EGF----VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+GF D+ W ++ISG+ Q+ EAL L++ M +GI PN+ T+ VL+A
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
++++G+++H + G ++V GSAL MYSKCGSL+D +F T K+V SWNAMI
Sbjct: 437 ATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMI 496
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
+G D ++ELFE ML EGM ++VT ++++SACSH G VE+G F M ++ G+
Sbjct: 497 SGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGL 556
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
+HYAC+VD+L R+G++ EA + + + + + C HG+ +L V GE
Sbjct: 557 DPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGE 616
Query: 478 EFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
+ +G R+ +V LS I A G + E + K M+ V K+ G S +E +N++
Sbjct: 617 KLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQY 672
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 250/520 (48%), Gaps = 53/520 (10%)
Query: 21 GKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
G+ + + +R G A C N+ LV YA CG + A +F+ I +V
Sbjct: 33 GRAVHGQIIRTG----ASTCIQHANV------LVNFYAKCGKLAKAHSIFNAIICKDVVS 82
Query: 81 LNWMVMASAFTGNFQEAIGYFSLMREFIYR---CNKFTFSIVLKACVGLLDIKKGKQVHA 137
N ++ + G + L RE + N +T + + KA L G+Q HA
Sbjct: 83 WNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHA 142
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ +M D+ V +L+ MY K GL+ +VF M ER+ +W++M+SGY +V+E
Sbjct: 143 LVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEE 202
Query: 198 AVV---LFERMKLEGLEPNQFTYNAIIASYARR----------------------GDSNA 232
A+ LF R K EG + + + + A+++S A SNA
Sbjct: 203 AIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNA 261
Query: 233 AFAFFS---------RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+S +M + +TW+AM++G++Q+ EA+KLF M +GIKP+
Sbjct: 262 LVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPS 321
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
T+ GVL A ++ G+++H+ + ++G +F +AL+DMY+K G L DAR F+
Sbjct: 322 EYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFD 381
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ ++VA W ++I Y ++ + ++ L+ RM G+ N+ T+ SVL ACS +E
Sbjct: 382 CLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLEL 441
Query: 404 GLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
G ++ ++K +G+++ + + M + G + + + R+ P S A +G
Sbjct: 442 GKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRRTPNKDVVSW-NAMISG 498
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADG 501
+ +G+ D A+ + EE G+ D FV + + C+ G
Sbjct: 499 LSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKG 538
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 184/384 (47%), Gaps = 30/384 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C L +GKQ+H+ L + ++F+ + LV +YA G + AR FD +
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFA-TTALVDMYAKAGCLADARKGFDCLQER 386
Query: 77 NVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+V + W + S + N +EA+ + M+ N T + VLKAC L ++ GKQ
Sbjct: 387 DVAL--WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ 444
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + GF +V +G+AL MYSKCG L VF +DVVSW +MISG + +
Sbjct: 445 VHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 504
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWN 253
DEA+ LFE M EG+EP+ T+ II++ + +G + +F+ M+ + G P + +
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564
Query: 254 AMISGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
M+ +++ + EA + + + G+ + ++ G + G ++ AL R
Sbjct: 565 CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSR 624
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA-----SWNAMIGCY------- 360
+ T L +Y+ G ++D +++ R V+ SW + Y
Sbjct: 625 -----ESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGD 679
Query: 361 GKHGMVDSSIELF----ERMLEEG 380
H M++ + +L +M+EEG
Sbjct: 680 TMHPMIEETKDLVCLVSRQMIEEG 703
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 38/173 (21%)
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ P+ T+ L ++ GR +H + R G + + L++ Y+KCG L A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSS---IELFERMLEEGMRANEVTLISVLSACS 396
++F K+V SWN++I Y ++G + SS ++LF M + + N TL + A S
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 397 -----------------------------------HGGLVEKGLEIFRSMKER 414
GLVE GL++F M ER
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 39/230 (16%)
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
L P+ T + ++++ + A A ++ G + N +++ +A+ + +A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI----------------------------- 300
+F ++ + N +TG Q GG++ S
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 301 -----QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
+GR+ HALV +M D++ ++L+ MY K G ++D +F +N +W+
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 356 MIGCYGKHGMVDSSIE---LFERMLEEGMRANEV--TLISVLSACSHGGL 400
M+ Y G V+ +I+ LF R EEG ++ V ++S L+A + GL
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGL 239
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 171/554 (30%), Positives = 286/554 (51%), Gaps = 36/554 (6%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
SV L LL K K+L+ Q+H+ L+ TN+ + + L+ +YA CG ++ L+F
Sbjct: 96 SVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLF 155
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
+ P+P+ ++ W + + + + + +A+ +F+ MR N FTFS +L AC
Sbjct: 156 NTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAAL 215
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
+ +G+Q+HA+ + F ND V AL+DMY+KCG + A VF M R++VSW SMI G
Sbjct: 216 LSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVG 275
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA----------------RRG---- 228
+ A+ +F ++ L P+Q + ++++++ A +RG
Sbjct: 276 FVKNKLYGRAIGVFR--EVLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGL 333
Query: 229 --------DSNAAFAFF---SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
D F +++ G D+VTWN MI G + + +A F+ M+
Sbjct: 334 VYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIR 393
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G++P+ + + + A ++ G IH+ V + G + S+L+ MY KCGS+ D
Sbjct: 394 EGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLD 453
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A +F T+ NV W AMI + +HG + +I+LFE ML EG+ +T +SVLSACSH
Sbjct: 454 AYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSH 513
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
G ++ G + F SM + +K EHYAC+VD+L R GR+ EA + +P + + G
Sbjct: 514 TGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWG 573
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
A C H ++ + E F++ P +++LSNI G EA+ +R++M
Sbjct: 574 ALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGING 633
Query: 518 VQKQPGFSRVEKRN 531
V+K+ G S ++ +N
Sbjct: 634 VRKESGCSWIDVKN 647
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 172/585 (29%), Positives = 295/585 (50%), Gaps = 63/585 (10%)
Query: 10 NLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
N + N LL K+ Q KQ+HA + L SL S ++ +Y+ ++ + L+
Sbjct: 2 NTTQNLCKTLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLLI 61
Query: 70 FDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
F+ +P+P L W + +T G F ++ +F M + F VLK+C +
Sbjct: 62 FNSLPSPPT-TLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMK 120
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSK--------------------------- 160
D++ G+ VH ++G D+ NAL++MYSK
Sbjct: 121 DLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKE 180
Query: 161 --CGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYN 218
L S R+VF M +RD+VSW ++ISG ++A+++ M L P+ FT +
Sbjct: 181 KESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLS 240
Query: 219 AIIASYAR-----RGDSNAAFAFFSRMTAEGFV--------------------------P 247
+++ +A +G +A + A+ F+
Sbjct: 241 SVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQH 300
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
D ++WN++I+G Q+ +E LK F+ ML++ IKPN+V+ + ++ A ++ +G+++H
Sbjct: 301 DGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLH 360
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+ R +VF SAL+DMY+KCG+++ AR +F+ + ++ SW AMI Y HG
Sbjct: 361 GYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAY 420
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+I LF+RM EG++ N V ++VL+ACSH GLV++ + F SM + Y + EHYA V
Sbjct: 421 DAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAV 480
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
D+L R GR+ EAY+ + + + T S+ C +H +LA + ++ F + +
Sbjct: 481 ADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNI 540
Query: 488 DGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+V+LSNI +A G W +A LR M++K ++K+P S +E +N+
Sbjct: 541 GAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNK 585
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 180/373 (48%), Gaps = 20/373 (5%)
Query: 29 LRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
L +GK++H N D ++F + S L+ +YA C V+ + VF +P + N ++
Sbjct: 252 LLKGKEIHGYAIRNGYDADVF-IGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIA 310
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
G F E + +F M + N +FS ++ AC L + GKQ+H + F+
Sbjct: 311 GCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDG 370
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
+V + +AL+DMY+KCG + +AR +F M D+VSWT+MI GY +A+ LF+RM+
Sbjct: 371 NVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRME 430
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRE 265
+EG++PN + A++ + + G + A+ +F+ MT + +P L + A+ + R
Sbjct: 431 VEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRL 490
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EA + M I+P + +L A + +I++ ++ + + ++ L
Sbjct: 491 EEAYEFISDM---HIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQ-NIGAYVLL 546
Query: 326 IDMYSKCGSLKDARTLFEITRIKNV-----ASW-------NAMIGCYGKHGMVDSSIELF 373
++YS G KDAR L R K + SW +A + H D E
Sbjct: 547 SNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEAL 606
Query: 374 ERMLEEGMRANEV 386
+ +LE+ R V
Sbjct: 607 KVLLEQMEREGYV 619
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 283/558 (50%), Gaps = 40/558 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L KC + KQ+HA L L+ + KL+ Y+ +++SA VF+++P+PNV
Sbjct: 29 LHKCTNPNHI---KQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNV 85
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYR---CNKFTFSIVLKACVGLLD-IKKGKQ 134
+ N+++ A + +GN ++ F ++ + + FT+ +LK C G + K
Sbjct: 86 HLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKM 145
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VHA ++GF D+ V N+LID Y +CG + A +VF GM ERDVVSW SM+ G
Sbjct: 146 VHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGD 205
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP------- 247
+D A+ +F+ M E ++ ++N ++ + + G+ + AF F RM V
Sbjct: 206 LDGALKVFDEMP----ERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCG 261
Query: 248 --------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
+LV W +ISG+A+ + EA+ L M SG++ ++
Sbjct: 262 YSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFF 321
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
+L A +G + +G+++H R ++ IDMY+KCG + DA +F +
Sbjct: 322 ISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKT 381
Query: 348 -KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
K++ SWN+MI +G HG + SIELF M+ EG + + T I +L AC+H GLV +G
Sbjct: 382 EKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRG 441
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F SM+ YG+ EHY C+VD+L R G + EA+ L+R +P + G C +H
Sbjct: 442 YFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMH 501
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
LA ++ + F++ P F +LSNI A G+W +RK M ++ QK G S
Sbjct: 502 NDVKLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSS 561
Query: 527 VEKRNEFVEKEVQNESKA 544
+E E E V++ S
Sbjct: 562 IEVEEEVHEFTVRDWSHP 579
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 280/549 (51%), Gaps = 52/549 (9%)
Query: 17 DCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+ ++ C++ + LR + + + D + S + L G YA G V A+ +FD++P
Sbjct: 115 NVMISGCVRYRNLRAARLLFDQMPERD--VVSWNAMLSG-YAQNGYVKEAKEIFDEMPCK 171
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N N M+ A G ++A F +K + ++ C+ +K+ + V
Sbjct: 172 NSISWNGMLAAYVQNGRIEDARRLFE---------SKADWELISWNCMMGGYVKRNRLVD 222
Query: 137 A----------------------------VATQMGFEN----DVSVGNALIDMYSKCGLL 164
A + Q FE DV A++ Y + G+L
Sbjct: 223 ARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGML 282
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
ARRVF GM E++ VSW ++I+GY ++D+A LFE M + N ++N +I Y
Sbjct: 283 DEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ----NVSSWNTMITGY 338
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
A+ GD A FF RM D ++W A+I+G+AQS EAL LF M G + N
Sbjct: 339 AQNGDIAQARNFFDRMPQR----DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNR 394
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
T T L ++++G+++H V + GL + G+AL+ MY KCG++ DA +FE
Sbjct: 395 STFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEG 454
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
K V SWN MI Y +HG ++ LFE M + G+ ++VT++ VLSACSH GLV+KG
Sbjct: 455 IEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKG 514
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
E F SM + YG+ + +HY C++D+L R+GR+ +A +L++ +P + GA
Sbjct: 515 TEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASR 574
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
IHG +L + FEM +V+LSN+ AA G W + +R M+++ V+K PG+
Sbjct: 575 IHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGY 634
Query: 525 SRVEKRNEF 533
S VE +N+
Sbjct: 635 SWVEVQNKI 643
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 186/407 (45%), Gaps = 40/407 (9%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM--REFIYRCNKFTFSI 118
G +SA +F+ +P + N M+ F A F M R+ + ++++
Sbjct: 63 GQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLV------SWNV 116
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
++ CV +++ + + QM E DV NA++ Y++ G + A+ +F M ++
Sbjct: 117 MISGCVRYRNLRAARLLF---DQMP-ERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKN 172
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
+SW M++ Y ++++A LFE L ++N ++ Y +R A F
Sbjct: 173 SISWNGMLAAYVQNGRIEDARRLFESKADWEL----ISWNCMMGGYVKRNRLVDARGIFD 228
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
RM D V+WN MISG+AQ+ EA +LF+ V + V+G +Q G L
Sbjct: 229 RMPER----DEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDE 284
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
+ ++ + + + +A+I Y +C + AR LFE +NV+SWN MI
Sbjct: 285 ARRVFDGMP--------EKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMIT 336
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
Y ++G + + F+RM + + ++ ++++ + G E+ L +F MK R G +
Sbjct: 337 GYAQNGDIAQARNFFDRMPQR----DSISWAAIIAGYAQSGYGEEALHLFVEMK-RDGER 391
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
+++ + + + A +L +QV V + +GC +
Sbjct: 392 LNRSTFTSTLSTCAE----IAALELGKQVHGRVVKA---GLESGCYV 431
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 144/301 (47%), Gaps = 43/301 (14%)
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ + + D+ N I + + G SA R+F+ M R +SW +MISG + K
Sbjct: 39 TTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYL 98
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
A LFE+M L ++N +I+ R + AA F +M D+V+WNAM+S
Sbjct: 99 ARQLFEKMPTRDL----VSWNVMISGCVRYRNLRAARLLFDQMPER----DVVSWNAMLS 150
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR---------EIHA 308
G+AQ+ EA ++F M N+++ G+L A G I+ R E+ +
Sbjct: 151 GYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNGRIEDARRLFESKADWELIS 206
Query: 309 LVCRMGLHI------------------DVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
C MG ++ D + + +I Y++ G L +A+ LFE + +++V
Sbjct: 207 WNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV 266
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+W AM+ Y ++GM+D + +F+ M E+ N V+ ++++ +++ E+F +
Sbjct: 267 FTWTAMVSGYVQNGMLDEARRVFDGMPEK----NSVSWNAIIAGYVQCKRMDQARELFEA 322
Query: 411 M 411
M
Sbjct: 323 M 323
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 35/262 (13%)
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
+N I ++ R G ++A F+ M + +WNAMISG + + A +LF+ M
Sbjct: 52 WNIAITNHMRNGQCDSALRLFNSMPRRSSI----SWNAMISGCLSNDKFYLARQLFEKMP 107
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+ NV ++G ++ L R L +M DV + +A++ Y++ G +K
Sbjct: 108 TRDLVSWNVMISGCVRYRNL-------RAARLLFDQMP-ERDVVSWNAMLSGYAQNGYVK 159
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
+A+ +F+ KN SWN M+ Y ++G ++ + LFE + LIS C
Sbjct: 160 EAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFE-------SKADWELISW--NCM 210
Query: 397 HGGLVEK-----GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM-- 449
GG V++ IF M ER V + ++ ++G ++EA L + P+
Sbjct: 211 MGGYVKRNRLVDARGIFDRMPERDEVS-----WNTMISGYAQNGELLEAQRLFEESPVRD 265
Query: 450 --YVTNSMAGAFRNGCNIHGRR 469
T ++G +NG RR
Sbjct: 266 VFTWTAMVSGYVQNGMLDEARR 287
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 188/558 (33%), Positives = 291/558 (52%), Gaps = 50/558 (8%)
Query: 19 LLGKCMKSKALRQ----GKQVHA-LLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDK 72
LLG ++S L + G+ VHA +L T+D + S L + LV +Y+ NSA+LV
Sbjct: 9 LLGSFLESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVL-S 67
Query: 73 IPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ NP ++ W + S N F A+ +FS MR N FTF V KA L
Sbjct: 68 LTNPRT-VVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPV 126
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
GKQ+HA+A + G DV VG + DMYSK GL AR +F M R++ +W + +S
Sbjct: 127 TGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAV 186
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
+ +A+ F++ EPN T+
Sbjct: 187 QDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVS 246
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
N +I Y + GD ++ FSR+ + ++V+W ++++ Q+ E A +F
Sbjct: 247 VFNGLIDFYGKCGDIVSSELVFSRIGSGR--RNVVSWCSLLAALVQNHEEERACMVFL-Q 303
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
++P + ++ VL A G +++GR +HAL + + ++F GSAL+D+Y KCGS+
Sbjct: 304 ARKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSI 363
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE--GMRANEVTLISVLS 393
+ A +F +N+ +WNAMIG Y G VD ++ LF+ M G+ + VTL+SVLS
Sbjct: 364 EYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLS 423
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
ACS G VE+GL+IF SM+ RYG++ EHYACVVD+L RSG + AY+ ++++P+ T
Sbjct: 424 ACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTI 483
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIM 513
S+ GA C +HG+ L E+ FE+ V+ SN+ A+ G W EA +RK M
Sbjct: 484 SVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEM 543
Query: 514 KEKNVQKQPGFSRVEKRN 531
++ ++K G+S V +N
Sbjct: 544 RDIGIKKNVGYSWVAVKN 561
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 168/550 (30%), Positives = 282/550 (51%), Gaps = 41/550 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIP 74
DC+L C + G Q+H L+ + L+ S+K+ L+ +Y+ CG + A +F +
Sbjct: 238 FDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMS 297
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ N M+ +G +E++ +F M + TFS +L + +++ +Q
Sbjct: 298 RADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQ 357
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + D+ + +ALID Y KC + A+++F DVV +T+MISGY +
Sbjct: 358 IHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGL 417
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
+A+ +F + + PN+ T A
Sbjct: 418 NIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCA 477
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+I YA+ G N A+ F R++ D+V+WN+MI+ AQS + A+ +F+ M VSG
Sbjct: 478 VIDMYAKCGRMNLAYEIFGRLSKR----DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSG 533
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I + V+++ L A S G+ IH + + L +DV++ S LIDMY+KCG+LK A
Sbjct: 534 ICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAM 593
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACSHG 398
+F+ + KN+ SWN++I YG HG + S+ LF M+E+ G R +++T + ++S C H
Sbjct: 594 NVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHV 653
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
G V++G+ FRSM + YG++ +EHYACVVD+ R+GR+ EAY+ ++ +P + G
Sbjct: 654 GDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGT 713
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
+H +LA ++ +V++SN A GEW +R +MKE+ V
Sbjct: 714 LLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREV 773
Query: 519 QKQPGFSRVE 528
QK PG+S +E
Sbjct: 774 QKIPGYSWIE 783
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 146/552 (26%), Positives = 258/552 (46%), Gaps = 53/552 (9%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCT-----NDLNIFSLKSKLVGVYAGCGDVNSAR 67
V+ CL+ C+ AL+ K + L T D N F + S L+ Y G ++ A
Sbjct: 134 VSTFPCLVKACV---ALKNFKGIEFLSDTVSSLGMDCNEF-VASSLIKAYLEYGKIDVAG 189
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
+FD++ + + N M+ A G I FSLMR N TF VL C L
Sbjct: 190 KLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKL 249
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
I G Q+H + G + + S+ N+L+ MYSKCG A ++F M D V+W MIS
Sbjct: 250 LIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMIS 309
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA----------------RRGDSN 231
GY ++E+++ F M G+ P+ T+++++ S + R S
Sbjct: 310 GYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISL 369
Query: 232 AAF-------AFF--------SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
F A+F ++ ++ D+V + AMISG+ + +AL++F+ ++
Sbjct: 370 DIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLV 429
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
I PN +T+ +L G ++++GRE+H + + G G A+IDMY+KCG +
Sbjct: 430 KVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 489
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
A +F +++ SWN+MI + ++I++F +M G+ + V++ + LSAC+
Sbjct: 490 LAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACA 549
Query: 397 HGGLVEKGLEIFRSM-KERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVT 452
+ G I M K + + E + ++DM + G + A +D +++ +
Sbjct: 550 NLPSESFGKAIHGFMIKHSLALDVYSE--STLIDMYAKCGNLKAAMNVFDTMKEKNIVSW 607
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAEN-L 509
NS+ A+ N HG+ ++ + E E +PD F+ + ++C G+ E
Sbjct: 608 NSIIAAYGN----HGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFF 663
Query: 510 RKIMKEKNVQKQ 521
R + ++ +Q Q
Sbjct: 664 RSMTQDYGIQPQ 675
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 225/473 (47%), Gaps = 55/473 (11%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKS-KLVGVYAGCGDVNSARLVFDKIP 74
L LL C LRQGKQVHA + N ++ S +++G+YA CG ++ +F ++
Sbjct: 34 LSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLD 93
Query: 75 NPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ + W + S+F G +A+ ++ M F + TF ++KACV L + K
Sbjct: 94 SRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 153
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+ + + +G + + V ++LI Y + G + A ++F + ++D V W M++GY
Sbjct: 154 EFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKC 213
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTY----------------------------------- 217
D + F M+++ + PN T+
Sbjct: 214 GASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIK 273
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
N++++ Y++ G + A F M+ D VTWN MISG+ QS E+L F M+
Sbjct: 274 NSLLSMYSKCGRFDDAIKLFRMMSRA----DTVTWNCMISGYVQSGLMEESLIFFYEMIS 329
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
SG+ P+ +T + +L + +++ R+IH + R + +D+F SALID Y KC +
Sbjct: 330 SGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 389
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A+ +F +V + AMI Y +G+ ++E+F +++ + NE+TL+S+L
Sbjct: 390 AQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILP---- 445
Query: 398 GGLVEKGLEIFRSMKERYGVKISKE-----HYAC-VVDMLCRSGRMVEAYDLL 444
V GL + +E +G I K + C V+DM + GRM AY++
Sbjct: 446 ---VIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIF 495
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 163/550 (29%), Positives = 281/550 (51%), Gaps = 40/550 (7%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L + G+Q+H L+ + L+ L + LV VY+ + AR +FD +P
Sbjct: 116 CVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQI 175
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ + N M+ G +A F+ M + + TF+ L + +K+ K++H
Sbjct: 176 DLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIH 235
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ G DV + +ALID+Y KC A ++F+ + D+V +T+MISGY
Sbjct: 236 GYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNK 295
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
+A+ +F + + + PN T+++I+ +
Sbjct: 296 DALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIM 355
Query: 224 --YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ G + A F R++ + D + WN++I+ F+Q + EA+ LF+ M + G+K
Sbjct: 356 NMYAKCGRLDLAHLIFGRIS----IKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVK 411
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+ VTV+ L A ++ G+EIH + + D+F SALI+MY+KCG L AR +
Sbjct: 412 YDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLV 471
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F + + KN +WN++I YG HG + S+ LF MLEEG++ + +T +++LS+C H G V
Sbjct: 472 FNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQV 531
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
E G+ FR M E YG+ EHYAC+ D+ R+G + EA++++ +P S+ G
Sbjct: 532 EDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLG 591
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C +HG +LA ++ + +++L+++ A G+W ++ +MKE+ VQK
Sbjct: 592 ACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKV 651
Query: 522 PGFSRVEKRN 531
PG S +E N
Sbjct: 652 PGCSWIEVNN 661
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 245/532 (46%), Gaps = 45/532 (8%)
Query: 23 CMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
C +R GK + ++ DL++F + S L+ +YA G + AR FDK+ + + +
Sbjct: 20 CTGLNNVRLGKVIQDMILEMGFDLDMF-VASSLIKLYADNGCIEDARRFFDKMIDKDCVL 78
Query: 81 LNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVAT 140
N M+ G AI F M + + TF+ VL ++ G+Q+H +
Sbjct: 79 WNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVV 138
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ G + VGN L+ +YSK L AR++F M + D+V W MI GY +D+A +
Sbjct: 139 RSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASM 198
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP------------- 247
LF M G++P+ T+ + + S A + G +
Sbjct: 199 LFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYF 258
Query: 248 ------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
D+V + AMISG+ + +AL++F+ +L + PN +T +
Sbjct: 259 KCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSS 318
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
+L A +I++GRE+H + + L GSA+++MY+KCG L A +F IK+
Sbjct: 319 ILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKD 378
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
WN++I + + G + +I LF +M EG++ + VT+ + LSAC++ + G EI
Sbjct: 379 AICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHG 438
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIH 466
M + + + +++M + G++ A ++L+++ NS+ A+ H
Sbjct: 439 FMI-KGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAY----GYH 493
Query: 467 GRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKEK 516
G ++ + E G+ +PD F+ + + C G+ + + M E+
Sbjct: 494 GYLADSLALFHNMLEEGI-QPDHITFLTILSSCGHAGQVEDGVRYFRCMTEE 544
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 225/483 (46%), Gaps = 89/483 (18%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+K+TF V+K C GL +++ GK + + +MGF+ D+ V ++LI +Y+ G + ARR F
Sbjct: 9 DKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFF 68
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA--------S 223
M ++D V W MI+GY + D A+ LF+ M +P+ T+ +++
Sbjct: 69 DKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVE 128
Query: 224 YARR------------------------------GDSNAAFAFFSRMTAEGFVPDLVTWN 253
Y R+ GD+ F ++ DLV WN
Sbjct: 129 YGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQI-------DLVVWN 181
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
MI G+ Q+ ++A LF M+ +GIKP+++T T L + + S++ +EIH + R
Sbjct: 182 RMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRH 241
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
G+ +DV+ SALID+Y KC A +F ++ ++ + AMI Y +GM ++E+F
Sbjct: 242 GVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIF 301
Query: 374 ERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE-------IFRSMKERY 415
+L++ M N +T S+L AC+ HG +++ LE +M +
Sbjct: 302 RWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKC 361
Query: 416 GV---------KISKEHYAC---VVDMLCRSGRMVEAYDLLRQVPM----YVTNSMAGAF 459
G +IS + C ++ + G+ EA L RQ+ M Y +++ A
Sbjct: 362 GRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAAL 421
Query: 460 RNGCNIHGRRDLAVTMGEE---FFEMGLRKPDGFVM--LSNICAADGEWHEAENLRKIMK 514
NI A+ G+E F G + D F M L N+ A G+ + A + +M+
Sbjct: 422 SACANIP-----ALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQ 476
Query: 515 EKN 517
EKN
Sbjct: 477 EKN 479
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 9/223 (4%)
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
ML G+ P+ T V++ ++++G+ I ++ MG +D+F S+LI +Y+ G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
++DAR F+ K+ WN MI Y + G DS+I+LF+ M+ + + VT VLS
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYV 451
+VE G ++ + R G+ +V + + ++ +A +D++ Q+ + V
Sbjct: 121 SCSEAMVEYGRQL-HGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVV 179
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
N M G + +G D A + E G+ KPD S
Sbjct: 180 WNRMIGGYVQ----NGFMDDASMLFNEMISAGI-KPDSITFTS 217
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 157/490 (32%), Positives = 266/490 (54%), Gaps = 40/490 (8%)
Query: 76 PNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P +++W M S + N F EAI F MR +F FS ++AC L I+ GK
Sbjct: 2 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 61
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H +A + G +++ VG+ L DMYSKCG + A +VF M +D VSWT+MI GY +
Sbjct: 62 QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIG 121
Query: 194 KVDEAVVLFERMKLE-----------------------------------GLEPNQFTYN 218
+ +EA++ F++M E G E + F N
Sbjct: 122 EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGN 181
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+ Y++ GD +A F + ++V++ +I G+ ++++ + L +F +
Sbjct: 182 ALTDMYSKAGDMESASNVFG---IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 238
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
GI+PN T + +++A +++ G ++HA V ++ D F S L+DMY KCG L+ A
Sbjct: 239 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 298
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
F+ +WN+++ +G+HG+ +I++FERM++ G++ N +T IS+L+ CSH
Sbjct: 299 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHA 358
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLVE+GL+ F SM + YGV +EHY+CV+D+L R+GR+ EA + + ++P +
Sbjct: 359 GLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCS 418
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
F C IHG +++ E+ ++ + V+LSNI A + +W + ++R M++ NV
Sbjct: 419 FLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNV 478
Query: 519 QKQPGFSRVE 528
+K PG+S V+
Sbjct: 479 KKLPGYSWVD 488
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 183/381 (48%), Gaps = 43/381 (11%)
Query: 23 CMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C ++ GKQ+H L + + + S L +Y+ CG + A VF+++P + +
Sbjct: 51 CASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKD--EV 108
Query: 82 NWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
+W M ++ G F+EA+ F M + ++ L AC L K G+ VH+
Sbjct: 109 SWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSV 168
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE-RDVVSWTSMISGYCNVSKVDEA 198
++GFE+D+ VGNAL DMYSK G + SA VF E R+VVS+T +I GY ++++
Sbjct: 169 VKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKG 228
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM-----TAEGFV------- 246
+ +F ++ +G+EPN+FT++++I + A + +++ + FV
Sbjct: 229 LSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDM 288
Query: 247 -------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
P + WN+++S F Q +A+K+F+ M+ G+KPN +T
Sbjct: 289 YGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITF 348
Query: 288 TGVLQAGGLTGSIQIGRE-IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+L G ++ G + +++ G+ S +ID+ + G LK+A+ I R
Sbjct: 349 ISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEF--INR 406
Query: 347 I---KNVASWNAMIGCYGKHG 364
+ N W + +G HG
Sbjct: 407 MPFEPNAFGWCSFLGACRIHG 427
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 167/358 (46%), Gaps = 45/358 (12%)
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRG 228
M +R++VSWT+MISG SK EA+ F M++ G P QF +++ I + A G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 229 DSNAAFAFFSRMTAEGFV--------------------------PDLVTWNAMISGFAQS 262
A + +E FV D V+W AMI G+++
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
EAL FK M+ + + + L A G + + GR +H+ V ++G D+F G
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 323 SALIDMYSKCGSLKDARTLFEI-TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
+AL DMYSK G ++ A +F I + +NV S+ +I Y + ++ + +F + +G+
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY--ACVVDMLCRSG---R 436
NE T S++ AC++ +E+G ++ + + + ++ + + +VDM + G +
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMK---INFDEDPFVSSILVDMYGKCGLLEQ 297
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
++A+D + NS+ F HG A+ + E + G+ KP+ +S
Sbjct: 298 AIQAFDEIGDPTEIAWNSLVSVFGQ----HGLGKDAIKIFERMVDRGV-KPNAITFIS 350
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 8/289 (2%)
Query: 20 LGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN-P 76
LG C KA + G+ VH+ + + +IF + + L +Y+ GD+ SA VF
Sbjct: 149 LGACGALKACKFGRSVHSSVVKLGFESDIF-VGNALTDMYSKAGDMESASNVFGIDSECR 207
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV ++ T ++ + F +R N+FTFS ++KAC +++G Q+H
Sbjct: 208 NVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLH 267
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A ++ F+ D V + L+DMY KCGLL A + F + + ++W S++S +
Sbjct: 268 AQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGK 327
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAM 255
+A+ +FERM G++PN T+ +++ + G +F M G VP ++ +
Sbjct: 328 DAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCV 387
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
I ++ R EA + M +PN L A + G ++G+
Sbjct: 388 IDLLGRAGRLKEAKEFINRM---PFEPNAFGWCSFLGACRIHGDKEMGK 433
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 7/198 (3%)
Query: 19 LLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L+ C AL QG Q+HA + D + F + S LV +Y CG + A FD+I +P
Sbjct: 250 LIKACANQAALEQGTQLHAQVMKINFDEDPF-VSSILVDMYGKCGLLEQAIQAFDEIGDP 308
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQV 135
N +V G ++AI F M + + N TF +L C +++G
Sbjct: 309 TEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYF 368
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSK 194
+++ G + +ID+ + G L A+ + M FE + W S + G C +
Sbjct: 369 YSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL-GACRIHG 427
Query: 195 VDEAVVLFERMKLEGLEP 212
D+ + KL LEP
Sbjct: 428 -DKEMGKLAAEKLVKLEP 444
>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
Length = 667
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 276/541 (51%), Gaps = 45/541 (8%)
Query: 30 RQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
R G+ VH AL + + +++ L+ +Y CGDV +A VF + N V N ++
Sbjct: 125 RHGRAVHCRALAAGFGGDTY-VQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAG 183
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
G + A+ F M ++ T VL AC D+ G+ VH + G +
Sbjct: 184 CVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDY 243
Query: 148 VSVGNALIDMYSKCGLLCSARRVF-HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
V+V NALIDMY KC L ARRVF H ++DVVSWT+MI Y + EA+ L +M
Sbjct: 244 VAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQML 303
Query: 207 LEGLE-PNQFTY-----------------------------------NAIIASYARRGDS 230
+ G PN T A+I +YAR G
Sbjct: 304 MSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKM 363
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
R+T E TWNA +SG+ S RE +A++LFK M+ ++P++ T+ +
Sbjct: 364 K-----LMRLTLERGSWRAETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASI 418
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A + ++ G+ IH + +G + LID+YSK G L A LF+ K+V
Sbjct: 419 LPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDV 478
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+W +I Y HG ++I L++RM+E G + N VT+ ++L ACSH G++++G+++F+
Sbjct: 479 VAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKD 538
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M+ +G+ + EHY+C+VDML R+GR+ EA+ L++ +P + S+ GA C +H +
Sbjct: 539 MRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVE 598
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+ F++ +V+L NI AA W + +++R++M E+ + K+PG S VE R
Sbjct: 599 FGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEAR 658
Query: 531 N 531
+
Sbjct: 659 S 659
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 212/466 (45%), Gaps = 49/466 (10%)
Query: 56 VYAGCGDVNSARLVFDKIPNPN-VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKF 114
VY CG +SA + ++P P V N ++ + G +EA+ +S MR F +
Sbjct: 54 VYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAF----DHL 109
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
TF KAC GL + G+ VH A GF D V NALI MY CG + +A VF M
Sbjct: 110 TFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAM 169
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
R VVSW ++I+G + A+ +F M +G+ ++ T +++ + A+ D N
Sbjct: 170 RNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGR 229
Query: 235 AFFSRMTAEGF--------------------------------VPDLVTWNAMISGFAQS 262
A + +G D+V+W AMI + +
Sbjct: 230 AVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLN 289
Query: 263 KRENEALKLFKGMLVSGIK-PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
R EA+ L ML+SG PN VT+ +L A S + + HAL R+GL D+
Sbjct: 290 DRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAV 349
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
+ALID Y++CG +K R E + +WNA + Y G +IELF+RM+ E +
Sbjct: 350 ETALIDAYARCGKMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELFKRMIAESV 408
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
R + T+ S+L A + +++G I G S E ++D+ ++G + A+
Sbjct: 409 RPDSATMASILPAYAESADLKEGKNI-HCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAW 467
Query: 442 DLLRQVP----MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMG 483
L + +P + T +AG +IHG A+ + + E G
Sbjct: 468 ALFQWLPEKDVVAWTTIIAGY-----SIHGHARTAILLYDRMVESG 508
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 10/289 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C + + K HAL L + ++++ L+ YA CG + RL ++ +
Sbjct: 318 LLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLER---GS 374
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
W S +T G ++AI F M R + T + +L A D+K+GK +
Sbjct: 375 WRAETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNI 434
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H +GF + LID+YSK G L +A +F + E+DVV+WT++I+GY
Sbjct: 435 HCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIHGHA 494
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM-TAEGFVPDLVTWNA 254
A++L++RM G +PN T ++ + + G + F M G +P+ ++
Sbjct: 495 RTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSC 554
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
++ ++ R EA +L + M +P+ +L A L +++ G
Sbjct: 555 LVDMLGRAGRIEEAHRLIQDM---PFEPSTSVWGALLGACVLHKNVEFG 600
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 166/499 (33%), Positives = 266/499 (53%), Gaps = 46/499 (9%)
Query: 51 SKLVGVYA--GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
SK+V A G + ARLVF++IPNP F N ++ ++AI ++ LM
Sbjct: 14 SKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQG 73
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
++FTF + K+C L + GKQ+H +T++GF +D + N L++MYS CG L SAR
Sbjct: 74 LDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSAR 130
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
+VF M + VVSW +MI +YA+
Sbjct: 131 KVFDKMVNKSVVSWATMI-----------------------------------GAYAQWD 155
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
+ A F RM +L WN MI+G + EAL LF M +SG+K + VT+
Sbjct: 156 LPHEAIKLFRRME---IASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMA 212
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
+L A G++++G+ +H + + + +DV G+AL+DMY+KCGS++ A +F+ K
Sbjct: 213 SLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEK 272
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+V +W A+I G ++ELF M ++ + +T + VL+ACSH GLV +G+ F
Sbjct: 273 DVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYF 332
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
SM +YG++ S EHY C+VDML R+GR+ EA DL++ +PM + + C IHG
Sbjct: 333 NSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGN 392
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+A ++ E+ + +V+LSNI ++ W A+ +R++M E+N++K PG S +E
Sbjct: 393 LVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIE 452
Query: 529 ---KRNEFVEKEVQNESKA 544
+EFV+ +V + +
Sbjct: 453 VGGVVHEFVKGDVSHPQSS 471
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 2/158 (1%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C AL GK +H + + + +L + LV +YA CG + SA VF ++P +
Sbjct: 214 LLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKD 273
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQVH 136
V +++ A G +A+ F M+ + + TF VL AC + +G +
Sbjct: 274 VMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFN 333
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
++ + G + + ++DM + G + A + M
Sbjct: 334 SMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNM 371
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 285/534 (53%), Gaps = 25/534 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSL---KSKLVGVYAGCGDVNSARLVFDKIPN 75
LL KC +L+ KQ+HA +C L+ L K L ++ A +F PN
Sbjct: 8 LLSKC---SSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHFPN 64
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
P+ FM N ++ + + + ++ F L R+ + FTF+ LKA ++ G Q
Sbjct: 65 PDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQ 124
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H+ A + GF+ + VG LI MY++CG SARRVF M E +VV+W ++++
Sbjct: 125 LHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGD 184
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
V+ A +F M + L ++N ++A YA+ G+ A F M + D V+W+
Sbjct: 185 VEGAQDVFGCMPVRNLT----SWNGMLAGYAKAGELGLARRVFYEMP----LRDEVSWST 236
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MI GFA + +EA F+ +L I+ N V++TGVL A G+ + G+ +H V + G
Sbjct: 237 MIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAG 296
Query: 315 LHIDVFTGS---ALIDMYSKCGSLKDARTLFE-ITRIKNVASWNAMIGCYGKHGMVDSSI 370
++ GS ALID YSKCG++ AR +F+ + +++ SW ++I HG + +I
Sbjct: 297 F---LYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAI 353
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
+LF M E G+R + +T IS+L ACSH GLVE+G +F MK YG++ + EHY C+VD+
Sbjct: 354 QLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDL 413
Query: 431 LCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGF 490
R+ R+ +AY+ + ++P+ + C+IHG ++A + EM
Sbjct: 414 YGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDH 473
Query: 491 VMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFVEKEVQNE 541
V+LSN+ A G+W + ++R+ M E +++K PG+S +E FV E NE
Sbjct: 474 VLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNE 527
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 175/574 (30%), Positives = 289/574 (50%), Gaps = 81/574 (14%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN--IFSLKSKLVGVYA--GCGDVNSARLVFDKIP 74
LL C K+ + KQ+H+ + L+ F+L SKL+ A G+++ A L+F+ I
Sbjct: 38 LLSTC---KSFQNLKQIHSQIIKTGLHNTQFAL-SKLIEFCAISPFGNLSYALLLFESIE 93
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
PN F+ N M+ ++ + + AI ++ M N +TF +LK+C + ++GKQ
Sbjct: 94 QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQ 153
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCG-------------------------------L 163
+H ++G E+D V +LI+MY++ G
Sbjct: 154 IHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGC 213
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------ 217
L ARR+F + RD VSW +MI+GY + +EA+ F+ MK + PN+ T
Sbjct: 214 LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273
Query: 218 -----------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
NA+I Y++ GD + A F + + D
Sbjct: 274 CAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEK----D 329
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
+++WN MI G++ EAL LF+ M S ++PN+VT +L A G++ +G+ IHA
Sbjct: 330 IISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHA 389
Query: 309 LVCR--MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
+ + +GL + ++LIDMY+KCG+++ A+ +F + K++ SWNAMI HG
Sbjct: 390 YIDKKFLGL-TNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHA 448
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
+ ++ELF +M +EG +++T + VLSACSH GLVE G + F SM E Y + +HY C
Sbjct: 449 NMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGC 508
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
++D+L R+G EA L++ + M ++ G+ C +HG +L + FE+
Sbjct: 509 MIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPEN 568
Query: 487 PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
P +V+LSNI A G W + +R + +K ++K
Sbjct: 569 PGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 282/535 (52%), Gaps = 32/535 (5%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLV--------GVYAGCGDVNSARLVF 70
LL C K L Q+H LL L +K K + G +N A+ +F
Sbjct: 37 LLQNCKNPKDL---IQLHTLLIKTSL----IKEKYAFGRLLLSFASFDNLGSLNYAQKLF 89
Query: 71 DKIPNP-NVFMLNWMVMASAFTGNFQEAIGYFSLM---REFIYRCNKFTFSIVLKACVGL 126
D + P N FM M+ A A GN +EA ++S M + ++Y N FTF+ V AC
Sbjct: 90 DTVDIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYP-NDFTFTYVFSACSKF 148
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL-CSARRVFHGMFERDVVSWTSM 185
+ +GKQ HA + FE V N+L+D Y K G + RRVF + DVVSW +
Sbjct: 149 NGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSWNCL 208
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
I+GY +DEA LF+ M E + ++ ++ YA G + A F M
Sbjct: 209 INGYVKSGDLDEARRLFDEMP----ERDVVSWTIMLVGYADAGFLSEASCLFDEMPKR-- 262
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
+LV+W+A+I G+ Q ++AL+LFK M V+ +K + V VT +L A G++ GR
Sbjct: 263 --NLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRW 320
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+H + + G+ +D +ALIDMYSKCG + A +F+ T K V W++MIG H
Sbjct: 321 LHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSF 380
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
+ +IELF +M+E G+ +E+T I++L+AC+H GLV+ GL+IF M E K +HY
Sbjct: 381 GEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYG 440
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
C+VD+L R+G + +A+ ++ +P+ ++ A + C +H +L +G +M +
Sbjct: 441 CIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALLSACKLHRNVELGEQVGRILIKMEPQ 500
Query: 486 KPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR---NEFVEKE 537
+V+ SN+ AA W + LR+ MK + +QK PG S +E +EFV ++
Sbjct: 501 NDMNYVLFSNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSIELNGAVHEFVSRD 555
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 271/527 (51%), Gaps = 37/527 (7%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTG--NFQEAIGYFSLMRE 106
L + L+ Y G G + AR +FD++P +V + W VM + +T N A F M
Sbjct: 45 LATTLIKSYFGKGLIGEARTLFDEMPERDV--VAWTVMIAGYTSCNNHTHAWMVFCEMMN 102
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL-LC 165
N FT S VLKAC G+ + G+ VH +A + G + + V NAL+DMY+ C + +
Sbjct: 103 EELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMD 162
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
A VF G+ ++ VSWT++I+GY + + +F +M LE +E N F+++ + +
Sbjct: 163 DACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACT 222
Query: 226 RRGDSNAAFAFFSRMTAEGF---VP----------------------------DLVTWNA 254
G + +T GF +P DL+TWN
Sbjct: 223 SIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNT 282
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
+I+G+ +S E+L +F M G PN T T ++ A + G++IH + R G
Sbjct: 283 LIAGYERSN-PTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRG 341
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L ++ +ALIDMYSKCG++ D+ +F +++ SW AM+ YG HG + ++ELF+
Sbjct: 342 LDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFD 401
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
+M+ G+R + V +++LSACSH GLV++GL F+ M Y + +E Y CVVD+L R+
Sbjct: 402 KMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRA 461
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
G++ EAY+L+ +P + G F C H +L ++ +VMLS
Sbjct: 462 GKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLS 521
Query: 495 NICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNE 541
NI AADG+W E LRK+MK +K+ G S VE N V +E
Sbjct: 522 NIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDE 568
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 88/219 (40%), Gaps = 16/219 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C L G+Q+H + L+ +L + L+ +Y+ CG++ + VF + +
Sbjct: 317 IMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRD 376
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQV 135
+ M++ G +EA+ F M R ++ F +L AC GL+D + +
Sbjct: 377 LVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVD-EGLRYF 435
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISG-----Y 189
+ D + ++D+ + G + A + M F+ D W + +
Sbjct: 436 KLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTF 495
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
N+ K+ +L R + G TY + YA G
Sbjct: 496 PNLGKLAAHRILDLRPHMAG------TYVMLSNIYAADG 528
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 273/553 (49%), Gaps = 41/553 (7%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVF 70
SV Y C+L C G QVH L+ + + + LV +Y+ CG++ AR +F
Sbjct: 246 SVTY-TCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLF 304
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ +P + N ++ G EA F+ M + + TF+ L + + ++
Sbjct: 305 NTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLR 364
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
K+VH+ + DV + +ALID+Y K G + AR++F DV T+MISGY
Sbjct: 365 HCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYV 424
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
+A+ F + EG+ PN T
Sbjct: 425 LHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVN 484
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
+AI YA+ G + A+ FF RM+ D + WN+MIS F+Q+ + A+ LF+ M
Sbjct: 485 VGSAITDMYAKCGRLDLAYEFFRRMSET----DSICWNSMISSFSQNGKPEMAVDLFRQM 540
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+SG K ++V+++ L + ++ G+E+H V R D F SALIDMYSKCG L
Sbjct: 541 GMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKL 600
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
AR +F + KN SWN++I YG HG ++LF ML G+ + VT + ++SAC
Sbjct: 601 ALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISAC 660
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
H GLV +G+ F M YG+ EHYAC+VD+ R+GR+ EA+D ++ +P +
Sbjct: 661 GHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGV 720
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
G C +HG +LA E+ + +V+LSN+ A GEW +R++MKE
Sbjct: 721 WGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKE 780
Query: 516 KNVQKQPGFSRVE 528
K VQK PG+S ++
Sbjct: 781 KGVQKIPGYSWID 793
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 245/504 (48%), Gaps = 43/504 (8%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L+ L C + ++Q +QVH + + ++ +L S+++G+Y CG ++ +F +
Sbjct: 47 LESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLE 106
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N NWM+ G F A+ ++ M +K+TF V+KAC GL ++
Sbjct: 107 LCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMV 166
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH A +GF D+ VG+ALI +Y+ G +C ARRVF + +RD + W M+ GY
Sbjct: 167 VHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGD 226
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF--------- 245
+ A+ F M+ N TY I++ A RG + GF
Sbjct: 227 FNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANT 286
Query: 246 --------------------VP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+P D VTWN +I+G+ Q+ +EA LF M+ +G+KP+
Sbjct: 287 LVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 346
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+VT L + +GS++ +E+H+ + R + DV+ SALID+Y K G ++ AR +F+
Sbjct: 347 SVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQ 406
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ +VA AMI Y HG+ +I F +++EGM N +T+ SVL AC+ ++
Sbjct: 407 QNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKL 466
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR---QVPMYVTNSMAGAFR 460
G E+ + ++ I A + DM + GR+ AY+ R + NSM +F
Sbjct: 467 GKELHCDILKKQLENIVNVGSA-ITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFS 525
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGL 484
+G+ ++AV + F +MG+
Sbjct: 526 Q----NGKPEMAVDL---FRQMGM 542
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 174/367 (47%), Gaps = 39/367 (10%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
S L+ +YA G + AR VFD++P + + N M+ +G+F A+G F MR
Sbjct: 184 SALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSM 243
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N T++ +L C G QVH + GFE D V N L+ MYSKCG L AR++
Sbjct: 244 VNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKL 303
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------- 217
F+ M + D V+W +I+GY DEA LF M G++P+ T+
Sbjct: 304 FNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSL 363
Query: 218 ----------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
+A+I Y + GD A F + T + D+ AM
Sbjct: 364 RHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNT----LVDVAVCTAM 419
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
ISG+ +A+ F+ ++ G+ PN++T+ VL A ++++G+E+H + + L
Sbjct: 420 ISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQL 479
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
V GSA+ DMY+KCG L A F + WN+MI + ++G + +++LF +
Sbjct: 480 ENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQ 539
Query: 376 MLEEGMR 382
M G +
Sbjct: 540 MGMSGAK 546
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 280/527 (53%), Gaps = 47/527 (8%)
Query: 11 LSV-NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
LSV N L L KC +A R ++V L D + + + +VG Y GDV +AR V
Sbjct: 194 LSVSNALVALYMKCEALEATRDARKV--LDEMPDKDALTWTTMVVG-YVRRGDVGAARSV 250
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
F+++ + N M+ +G EA F M ++FTF+ VL AC
Sbjct: 251 FEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFF 310
Query: 130 KKGKQVHAVAT--QMGF--ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
GK VH T Q F E + V NAL+ +YSKCG + ARR+F M +DVVSW ++
Sbjct: 311 AHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTI 370
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
+SGY S +D+AV +FE M + N+ ++ +++ Y G S A F+RM AE
Sbjct: 371 LSGYVESSCLDKAVEVFEEMPYK----NELSWMVMVSGYVHGGFSEDALKLFNRMRAE-- 424
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
+KP + T G + A G GS++ G++
Sbjct: 425 ---------------------------------DVKPCDYTYAGAISACGELGSLKHGKQ 451
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+H + ++G G+ALI MY++CG++K+A +F + + SWNAMI G+HG
Sbjct: 452 LHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGH 511
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
++ELF+RM+ EG+ + ++ ++VL+AC+H GLV++G + F SMK +G+ ++HY
Sbjct: 512 GREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYT 571
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
++D+L R+GR+ EA DL++ +P T S+ A +GC G +L ++ F+M +
Sbjct: 572 RLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQ 631
Query: 486 KPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+++LSN +A G W +A +RK+M+++ V+K+PG S +E N+
Sbjct: 632 HDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNK 678
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 124/261 (47%), Gaps = 16/261 (6%)
Query: 154 LIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN 213
LI +Y+ G L +A +F + V+ TS+++ Y ++ AV F+ + +
Sbjct: 65 LIHLYTLSGDLPAAATLFRA--DPCPVAATSLVAAYAAAGRLPAAVSFFD--AVPQARRD 120
Query: 214 QFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAMIS--GFAQSKRENEALK 270
+NA+I++YAR + A A F + A G + PD ++ A++S G + +
Sbjct: 121 TVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQ 180
Query: 271 LFKGMLVSG----IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
L +L SG + +N V ++ L + R+ ++ M D T + ++
Sbjct: 181 LQCSVLKSGAGGVLSVSNALVALYMKCEALEAT----RDARKVLDEMP-DKDALTWTTMV 235
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
Y + G + AR++FE +K WNAMI Y GMV + ELF RM+ E + +E
Sbjct: 236 VGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEF 295
Query: 387 TLISVLSACSHGGLVEKGLEI 407
T SVLSAC++ G G +
Sbjct: 296 TFTSVLSACANAGFFAHGKSV 316
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 176/565 (31%), Positives = 276/565 (48%), Gaps = 73/565 (12%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N FS + L+ A G + A +F IP+P+ N +V A A G +A+ + + M
Sbjct: 80 NTFSYNA-LLSACARLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAM 138
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
+ N ++F+ L AC + G+QVHA+ T+ +DV +G AL+DMY+KC
Sbjct: 139 HADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERP 198
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------- 217
A++VF M ER++VSW S+I+ Y VDEA+ LF RM +G P++ T
Sbjct: 199 EEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSAC 258
Query: 218 -----------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
NA++ YA+ G + A F RM V +
Sbjct: 259 AGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSE 318
Query: 249 ---------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+V WN +I+ +A + E EAL+LF + +
Sbjct: 319 TSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVW 378
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID------VFTGSALIDMYSKCGSL 335
P + T VL A ++Q+G++ H V + G D VF G++L+DMY K GS+
Sbjct: 379 PTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSI 438
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
D +FE ++ SWNAMI Y ++G ++ LFERML R + VT+I VLSAC
Sbjct: 439 SDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSAC 498
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
H GLV++G F+SM E +G+ +++HY C++D+L R+G + E +L+ +PM +
Sbjct: 499 GHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVL 558
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
+ C +H D+ + FE+ +V+LSN+ A G+W + +R+ MK
Sbjct: 559 WASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKH 618
Query: 516 KNVQKQPGFSRVE---KRNEFVEKE 537
+ V KQPG S +E K N F+ ++
Sbjct: 619 RGVSKQPGCSWIEIGRKVNVFLARD 643
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 151/297 (50%), Gaps = 39/297 (13%)
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
F + + N L+ Y++ G L ARRVF GM R+ S+ +++S + + D+A+ LF
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
+ +P+Q +YNA++A+ A+ G A F + M A+ FV + ++ + +S A K
Sbjct: 106 AIP----DPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEK 161
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
+ + G ++HALV + DV+ G+
Sbjct: 162 -----------------------------------ASRTGEQVHALVTKSSHGSDVYIGT 186
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
AL+DMY+KC ++A+ +F+ +N+ SWN++I CY ++G VD ++ LF RM+++G
Sbjct: 187 ALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVP 246
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+EVTL SV+SAC+ +G ++ M + + +VDM + GR EA
Sbjct: 247 DEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEA 303
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 145/329 (44%), Gaps = 45/329 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C A R+G+QVH + +D L + LV +YA CG A+ VFD++
Sbjct: 251 LASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRM 310
Query: 74 P-------------------------------NPNVFMLNWMVMASAFTGNFQEAIGYF- 101
NV N ++ A +EA+ F
Sbjct: 311 AIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFV 370
Query: 102 SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF------ENDVSVGNALI 155
L RE ++ + +T+ VL AC L +++ G+Q H + GF E+DV VGN+L+
Sbjct: 371 RLKRESVWPTH-YTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLV 429
Query: 156 DMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF 215
DMY K G + +VF M RD VSW +MI GY + +A++LFERM P+
Sbjct: 430 DMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSV 489
Query: 216 TYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
T ++++ G +F MT + G +P + MI ++ E +L +
Sbjct: 490 TMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIEN 549
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
M ++P+ V +L A L +I +G
Sbjct: 550 M---PMEPDAVLWASLLGACRLHKNIDMG 575
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 172/517 (33%), Positives = 273/517 (52%), Gaps = 37/517 (7%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMR-EF 107
+ S L +Y V+ AR VFD +P+P+ + W + + +G+ EA+ F+ M +
Sbjct: 151 VASALAKLYFVLSRVDHARKVFDTVPSPDTVL--WNTLLAGLSGS--EAVESFARMVCDG 206
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
R + T + VL A + D+ G+ VH+ A + G V LI +YSKCG + SA
Sbjct: 207 SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESA 266
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR 227
R +F M + D+V++ ++ISGY V +V LF + GL PN T A+I ++
Sbjct: 267 RCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPF 326
Query: 228 GDSNAA-----FAFFSRMTAEGFVPDLVT--------------------------WNAMI 256
G A F S TA V +T WNAMI
Sbjct: 327 GHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMI 386
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
SG+AQ+ A+ LF+ M+ ++PN +T++ L A G++ +G+ +H ++ L
Sbjct: 387 SGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLE 446
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+V+ +ALIDMY+KCGS+ +AR +F KNV SWNAMI YG HG +++L++ M
Sbjct: 447 PNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDM 506
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
L+ + T +SVL ACSHGGLVE+G ++FRSM + Y + EH C+VD+L R+G+
Sbjct: 507 LDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQ 566
Query: 437 MVEAYDLLRQVP-MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
+ EA++L+ + P V + GA C +H DLA ++ FE+ +V+LSN
Sbjct: 567 LKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSN 626
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ + ++ EA +R+ K + + K PG++ +E N+
Sbjct: 627 LHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNK 663
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 180/416 (43%), Gaps = 65/416 (15%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC-NKFTFSIVLKACVGL- 126
+F P P+ F+ N ++ + SL ++ C + F+F+ + L
Sbjct: 74 LFRGFPRPDRFLRNALLRSLP------------SLRPRLLFPCPDSFSFAFAATSLAALC 121
Query: 127 ------LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
+ +HA+A G+ D V +AL +Y + AR+VF + D V
Sbjct: 122 SRGGGAASSSAARALHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTV 181
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLE-------------------------------- 208
W ++++G EAV F RM +
Sbjct: 182 LWNTLLAGLSG----SEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSF 237
Query: 209 ----GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
GL ++ +I+ Y++ GD +A F M PDLV +NA+ISG++ +
Sbjct: 238 AEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEK----PDLVAYNALISGYSVNGM 293
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
++ LF ++ G+ PN+ T+ ++ G + + +H V + G + +A
Sbjct: 294 VGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTA 353
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
+ ++ + ++ AR F+ K + SWNAMI Y ++G+ + ++ LFE+M++ +R N
Sbjct: 354 ITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPN 413
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+T+ S LSAC+ G + G + R + E ++ + ++DM + G + EA
Sbjct: 414 PITISSTLSACAQLGALSLGKWLHRIITEE-DLEPNVYVMTALIDMYAKCGSISEA 468
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 11/265 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL +C+ L+ G ++ + T I +L +L D+ SAR FD +P +
Sbjct: 330 LLAQCLHGFVLKSGFTANSPVSTA---ITTLHCRL-------NDMESARKAFDTMPEKTM 379
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
N M+ A G + A+ F M + R N T S L AC L + GK +H +
Sbjct: 380 ESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRI 439
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
T+ E +V V ALIDMY+KCG + ARR+F+ M ++VVSW +MI+GY + EA
Sbjct: 440 ITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEA 499
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAMIS 257
+ L++ M L P T+ +++ + + G + F MT + + P + M+
Sbjct: 500 LKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVD 559
Query: 258 GFAQSKRENEALKLFKGMLVSGIKP 282
++ + EA +L S + P
Sbjct: 560 LLGRAGQLKEAFELISEFPKSAVGP 584
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 13/183 (7%)
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+HAL G D F SAL +Y + AR +F+ + WN ++ G G
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLA--GLSG- 192
Query: 366 VDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY 424
++E F RM+ +G +R + TL SVL A + V G S E+ G+ +
Sbjct: 193 -SEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMG-RCVHSFAEKCGLAEHEHVL 250
Query: 425 ACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFE 481
++ + + G + A +D++ + + N A +G +++G +V + E
Sbjct: 251 TGLISLYSKCGDVESARCLFDMMEKPDLVAYN----ALISGYSVNGMVGSSVNLFTELMT 306
Query: 482 MGL 484
+GL
Sbjct: 307 LGL 309
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 186/566 (32%), Positives = 286/566 (50%), Gaps = 82/566 (14%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFD 71
+ L+ KC+ ++ L+ GK +H+ L IF+ L ++L+ Y+ C + SA VF
Sbjct: 15 QHYSSLISKCITTRHLKLGKLLHSHFIKTAL-IFTTFLANRLIDFYSKCDSIQSAHKVFH 73
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEA------------IGYFSLM--------------- 104
+P N N ++ A + +G F EA + Y SL+
Sbjct: 74 VLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNV 133
Query: 105 -REFIYRC-----NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMY 158
+ + +C ++FT ++ +C L + +QVH A +G +++ +GNALID Y
Sbjct: 134 FKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAY 193
Query: 159 SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYN 218
KCG + +F M ERDVVSWTSM+
Sbjct: 194 GKCGEPDISFSIFSRMPERDVVSWTSMV-------------------------------- 221
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+YA+ A FS+M + + V+W A+I+GFAQ+ R +EAL LF+ M
Sbjct: 222 ---AAYAQASRLEDAHWLFSQMQEK----NTVSWTALIAGFAQNGRGDEALHLFEQMREE 274
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR---MGLHIDVFTGSALIDMYSKCGSL 335
GI P+ T VL A I G+EIH + R + ++F +ALIDMY KCG +
Sbjct: 275 GIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQM 334
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ A TLF+ K++ SWN++I + ++G + S+ +FERM+E +R N VT + +LSAC
Sbjct: 335 RSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSAC 394
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN-S 454
H GLV +GL I SM++ YGV +HYA ++D+L R+ R+ EA L+++ P +
Sbjct: 395 CHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAMGLIKRAPKGSDHVG 454
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMK 514
M GA C IHG DLA E F++ +VM+ NI AA W EA +R++M
Sbjct: 455 MWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVYNIYAAASRWDEARQVRRLMM 514
Query: 515 EKNVQKQPGFSRVEKRN---EFVEKE 537
E+ ++K+ S +E RN +FV KE
Sbjct: 515 ERGLRKEAACSWIEVRNTRHQFVAKE 540
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+S + P + + ++ T +++G+ +H+ + L F + LID YSKC S++
Sbjct: 7 LSSLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQ 66
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
A +F + +KN SWN +I Y + G+ + + L ++M + N V+ S++S
Sbjct: 67 SAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQM----PKPNLVSYNSLISGLG 122
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
H G ++ L +F++M ++ + E + C S + A +LLRQV
Sbjct: 123 HHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCAS---LGAPELLRQV 170
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 171/512 (33%), Positives = 267/512 (52%), Gaps = 45/512 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAG--CGDVNSARLVFDKIPN 75
LL +C + LRQ +H + L + + SKL+ A G + AR VFD+I
Sbjct: 24 LLQRCSNMEELRQ---IHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
PN FM N M+ + + +EA+ + M N +TF +LKAC + ++ +Q+
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQI 140
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA +MGF +++ N+L+++YSK G + SAR +F + +RD VSW SMI G
Sbjct: 141 HAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDG------- 193
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
Y + G+ A+ F+ M ++++W +M
Sbjct: 194 ----------------------------YTKCGEIEMAYEIFNHMPER----NIISWTSM 221
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
ISG + + EAL LF M +GIK +NV + LQA G + G+ IHA + + +
Sbjct: 222 ISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEI 281
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
ID G LIDMY+KCG L++A +F K V+ W AMI Y HG ++E F +
Sbjct: 282 EIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMK 341
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M G+ N++T +L+ACSH GLV + +F SM+ +G K S EHY C+VD+L R+G
Sbjct: 342 MQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAG 401
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
+ EA +L+ +P+ ++ GA N C+IHG +L +G+ ++ ++ L++
Sbjct: 402 LLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLAS 461
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
I AA GEW++A +R+ MKE+ V K PG S +
Sbjct: 462 IHAAAGEWNQAARVRRQMKEQGVSKLPGCSVI 493
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/525 (30%), Positives = 263/525 (50%), Gaps = 62/525 (11%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
A +F +I P + N M+ + + EAI ++LM N T+ + KAC
Sbjct: 30 AHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACAR 89
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
+ D+ G +HA ++GFE+ + V NALI+MY CG L A++VF M ERD+VSW S+
Sbjct: 90 VPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSL 149
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------------------- 217
+ GY + E + +FE M++ G++ + T
Sbjct: 150 VCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNV 209
Query: 218 -------NAIIASYARRGDSNAAFAFFSRMTAEGFVP----------------------- 247
N +I Y RRG + A F +M V
Sbjct: 210 EIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDA 269
Query: 248 ----DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
D+++W MI+ ++Q+ + EAL+LFK M+ S +KP+ +TV VL A TGS+ +G
Sbjct: 270 MSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVG 329
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
H + + + D++ G+ALIDMY KCG ++ A +F+ R K+ SW ++I +
Sbjct: 330 EAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLAVN 389
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
G DS+++ F RML E ++ + + +L AC+H GLV+KGLE F SM++ YG+K +H
Sbjct: 390 GFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMKH 449
Query: 424 YACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMG 483
Y CVVD+L RSG + A++ ++++P+ + + +HG LA ++ E+
Sbjct: 450 YGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIPLAEIATKKLLELD 509
Query: 484 LRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+V+ SN A W +A +R++M++ NVQK G S +E
Sbjct: 510 PSNSGNYVLSSNTYAGSNRWEDAVKMRELMEKSNVQKPSGSSCIE 554
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 165/367 (44%), Gaps = 64/367 (17%)
Query: 144 FENDVSVGNALIDMYS-KCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
D S LI Y+ + A +F + + W MI G+ + +EA+ ++
Sbjct: 6 LRTDPSTIYNLIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMY 65
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF----------------- 245
M +GL N TY + + AR D + +R+ GF
Sbjct: 66 NLMYRQGLLGNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSC 125
Query: 246 ------------VP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
+P DLV+WN+++ G+ Q KR E L +F+ M V+G+K + VT+ V+
Sbjct: 126 GHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVV 185
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A G + + + + IDV+ G+ LIDMY + G + AR +F+ + +N+
Sbjct: 186 LACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLV 245
Query: 352 SWNAMIGCYGKHG----------------------MVDS---------SIELFERMLEEG 380
SWNAMI YGK G M+ S ++ LF+ M+E
Sbjct: 246 SWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESK 305
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++ +E+T+ SVLSAC+H G ++ G E ++Y VK ++DM C+ G + +A
Sbjct: 306 VKPDEITVASVLSACAHTGSLDVG-EAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKA 364
Query: 441 YDLLRQV 447
++ +++
Sbjct: 365 LEVFKEM 371
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/485 (32%), Positives = 258/485 (53%), Gaps = 43/485 (8%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
KL YA G ++ + +F + NP+VF ++ A G ++A+ +++ M
Sbjct: 13 DKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVE 72
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N FTFS +LK C I+ GK +H+ A ++GF++D+ V L+D+Y++ G + SA+++
Sbjct: 73 PNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQL 128
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M E+ +VS T+M++ Y ++D A VLF+ M+ E + +N +I Y + G
Sbjct: 129 FDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGME----ERDGVCWNVMIDGYTQNGMP 184
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
N A F R ML + KPN VTV V
Sbjct: 185 NEALVLFRR-----------------------------------MLKAKAKPNEVTVLSV 209
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A G G+++ GR +H+ + G+ +V G+AL+DMYSKCGSL+DAR +F+ K+V
Sbjct: 210 LSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDV 269
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+WN+MI Y G +++LF+ M G+ +T I +LSAC H G V +G +IF
Sbjct: 270 VAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNK 329
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
MK+ YG++ EHY C+V++L R+G + +AY+L++ + + + G C +HG+
Sbjct: 330 MKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIA 389
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
L + E + L +++LSNI AA G W LR +MK+ V+K+PG S +E
Sbjct: 390 LGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVN 449
Query: 531 NEFVE 535
N+ E
Sbjct: 450 NKVHE 454
>gi|357116106|ref|XP_003559825.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Brachypodium distachyon]
Length = 739
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/539 (33%), Positives = 286/539 (53%), Gaps = 53/539 (9%)
Query: 33 KQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
+Q+HAL + L ++F + + LV Y+ + +AR VFD++P ++ N M+ A
Sbjct: 160 RQLHALASRSGLVADVF-VGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLAQ 218
Query: 91 TGNFQEAI--GYFSLMRE--FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
G+ + + L+++ R ++ + V+ AC I+ G+QVH+ ++G E
Sbjct: 219 DGDCPTEVILVFLRLLKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEG 278
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
VS+GN L+ MY K G AR++ M ERDV+SWT+ IS + ++A+ LF M+
Sbjct: 279 KVSIGNVLVAMYYKSGAAGCARKLLKSMDERDVISWTTAIS----MDGEEDAIELFNGMR 334
Query: 207 LEGLEPNQFTY-----------------------------------NAIIASYARRGDSN 231
+G+ PN+ T+ N++I YA+ +
Sbjct: 335 QDGVPPNEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMD 394
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A F RM P+++ WNA+ISG+AQ++ NEAL++F M V ++PN T VL
Sbjct: 395 DARTVFDRMPR----PEIIAWNALISGYAQNELCNEALQVFSCM-VRCLRPNETTFASVL 449
Query: 292 QA--GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
A T S+ G H ++GL + + ALIDMY+K GSL+++R F++T ++
Sbjct: 450 SAVTAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVHRS 509
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ +W A+I + KHG D+ + LF+ M+ G+ + V L+SVL+AC H G V G EIF
Sbjct: 510 LIAWTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREIFD 569
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
SM + V+ EHYACV+DML R+GR+ EA +L+ Q+P + S + C IHG
Sbjct: 570 SMPAEHHVEPWPEHYACVIDMLGRAGRLEEAEELMLQMPTGPSVSALQSLLGACRIHGNT 629
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+A + E + +V+LSNI A G+W +R+ M+EK V+K+ GFS V+
Sbjct: 630 SIAERVAGILTETEPTESGAYVLLSNIYAEKGDWGGVAKVRREMREKGVRKEIGFSWVD 688
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 162/355 (45%), Gaps = 50/355 (14%)
Query: 135 VHAVATQMGFENDVSVGNALIDMYSK-CGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+H +A G + V N+L Y+K SA +VFH RDV S+ +++S +
Sbjct: 59 LHGLAIASGLDAFSFVTNSLAARYAKSASSFPSAAKVFHTARARDVSSYNTILSALPDRG 118
Query: 194 KV--------------DEAVVLFERMKL----------------------EGLEPNQFTY 217
+ +AV L + L GL + F
Sbjct: 119 EALAFAAWMLRSGDVRPDAVTLTVALSLAASRGEADGVWIVRQLHALASRSGLVADVFVG 178
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR-ENEALKLFKGML 276
NA++ +Y+R AA F M A DLV+WNAMI G AQ E + +F +L
Sbjct: 179 NALVTAYSRGALLGAARRVFDEMPAR----DLVSWNAMICGLAQDGDCPTEVILVFLRLL 234
Query: 277 VSG---IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
G ++P+ ++V V+ A G G I++GR++H+ ++G+ V G+ L+ MY K G
Sbjct: 235 KDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAMYYKSG 294
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
+ AR L + ++V SW I G+ + +IELF M ++G+ NEVT ++++S
Sbjct: 295 AAGCARKLLKSMDERDVISWTTAISMDGE----EDAIELFNGMRQDGVPPNEVTFVALMS 350
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
A + G G ++ ++ + GV ++ M + RM +A + ++P
Sbjct: 351 ALAAGCPARYG-QMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMP 404
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 278/546 (50%), Gaps = 52/546 (9%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
L C++ + LR + + + D + S + L G YA G V A+ +FD++P N
Sbjct: 37 LRGCVRYRNLRAARLLFDQMPERD--VVSWNAMLSG-YAQNGYVKEAKEIFDEMPCKNSI 93
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA-- 137
N M+ A G ++A F +K + ++ C+ +K+ + V A
Sbjct: 94 SWNGMLAAYVQNGRIEDARRLFE---------SKADWELISWNCMMGGYVKRNRLVDARG 144
Query: 138 --------------------------VATQMGFEN----DVSVGNALIDMYSKCGLLCSA 167
+ Q FE DV A++ Y + G+L A
Sbjct: 145 IFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEA 204
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR 227
RRVF GM E++ VSW ++I+GY ++D+A LFE M + N ++N +I YA+
Sbjct: 205 RRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ----NVSSWNTMITGYAQN 260
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
GD A FF RM D ++W A+I+G+AQS EAL LF M G + N T
Sbjct: 261 GDIAQARNFFDRMPQR----DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTF 316
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
T L ++++G+++H V + GL + G+AL+ MY KCG++ DA +FE
Sbjct: 317 TSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE 376
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
K V SWN MI Y +HG ++ LFE M + G+ ++VT++ VLSACSH GLV+KG E
Sbjct: 377 KEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEY 436
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
F SM + YG+ + +HY C++D+L R+GR+ +A +L++ +P + GA IHG
Sbjct: 437 FYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHG 496
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
+L + FEM +V+LSN+ AA G W + +R M+++ V+K PG+S V
Sbjct: 497 NTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWV 556
Query: 528 EKRNEF 533
E +N+
Sbjct: 557 EVQNKI 562
>gi|356501914|ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02750-like [Glycine max]
Length = 627
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 183/489 (37%), Positives = 253/489 (51%), Gaps = 46/489 (9%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMR-E 106
+ + LV Y CG+V SA VF+++P +V N V G + + F +MR E
Sbjct: 174 VATSLVTAYCKCGEVVSASKVFEELPVKSVVSYNAFVSGLLQNGVPRLVLDVFKEMMRGE 233
Query: 107 FIYRC--NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
C N T VL AC L I+ G+QVH V ++ + V V AL+DMYSKCG
Sbjct: 234 ECVECKLNSVTLVSVLSACGSLQSIRFGRQVHGVVVKLEAGDGVMVMTALVDMYSKCGFW 293
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
SA VF G +EG N T+N++IA
Sbjct: 294 RSAFEVFTG---------------------------------VEGNRRNLITWNSMIAGM 320
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+S A F R+ +EG PD TWN+MISGFAQ EA K F M G+ P
Sbjct: 321 MLNKESERAVDMFQRLESEGLKPDSATWNSMISGFAQLGECGEAFKYFGQMQSVGVAPCL 380
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
VT +L A + +Q G+EIH L R ++ D F +AL+DMY KCG AR +F+
Sbjct: 381 KIVTSLLSACADSSMLQHGKEIHGLSLRTDINRDDFLVTALVDMYMKCGLASWARGVFDQ 440
Query: 345 TRIK--NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
K + A WNAMIG YG++G +S+ E+F+ MLEE +R N T +SVLSACSH G V+
Sbjct: 441 YDAKPDDPAFWNAMIGGYGRNGDYESAFEIFDEMLEEMVRPNSATFVSVLSACSHTGQVD 500
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV---PMYVTNSMAGAF 459
+GL FR M+ YG++ EH+ C+VD+L RSGR+ EA DL+ ++ P V S+ GA
Sbjct: 501 RGLHFFRMMRIEYGLQPKPEHFGCIVDLLGRSGRLSEAQDLMEELAEPPASVFASLLGA- 559
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C + +L M ++ ++ P V+LSNI A G W E E +R ++ +K +
Sbjct: 560 ---CRCYLDSNLGEEMAKKLLDVEPENPAPLVVLSNIYAGLGRWKEVERIRGVITDKGLD 616
Query: 520 KQPGFSRVE 528
K GFS +E
Sbjct: 617 KLSGFSMIE 625
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 213/516 (41%), Gaps = 96/516 (18%)
Query: 92 GNFQEAIGYFSLMRE-FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
G ++EA+ FS + + + FTF + KAC L + +HA + GF +D
Sbjct: 15 GFYREALSLFSHLHSCSSHTLHSFTFPTLFKACTNLRSPSHTQTLHAHLLKTGFHSDPYA 74
Query: 151 GNALIDMYSKCGL-LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+AL Y+ A + F M + +V S + +SG+ + EA+ +F R L
Sbjct: 75 SSALTAAYAANPRHFLDALKAFDEMPQPNVASLNAALSGFSRNGRRGEALRVFRRAGLGP 134
Query: 210 LEPNQFTY---------------------------------NAIIASYARRGDSNAAFAF 236
L PN T +++ +Y + G+ +A
Sbjct: 135 LRPNSVTIACMLGVPRVGANHVEMMHCCAVKLGVEFDAYVATSLVTAYCKCGEVVSASKV 194
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML----VSGIKPNNVTVTGVLQ 292
F + V +V++NA +SG Q+ L +FK M+ K N+VT+ VL
Sbjct: 195 FEELP----VKSVVSYNAFVSGLLQNGVPRLVLDVFKEMMRGEECVECKLNSVTLVSVLS 250
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF---EITRIKN 349
A G SI+ GR++H +V ++ V +AL+DMYSKCG + A +F E R +N
Sbjct: 251 ACGSLQSIRFGRQVHGVVVKLEAGDGVMVMTALVDMYSKCGFWRSAFEVFTGVEGNR-RN 309
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT---------------------- 387
+ +WN+MI + + ++++F+R+ EG++ + T
Sbjct: 310 LITWNSMIAGMMLNKESERAVDMFQRLESEGLKPDSATWNSMISGFAQLGECGEAFKYFG 369
Query: 388 -------------LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
+ S+LSAC+ +++ G EI + R + +VDM +
Sbjct: 370 QMQSVGVAPCLKIVTSLLSACADSSMLQHGKEI-HGLSLRTDINRDDFLVTALVDMYMKC 428
Query: 435 GR------MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
G + + YD P + + G RN G + A + +E E +R
Sbjct: 429 GLASWARGVFDQYDAKPDDPAFWNAMIGGYGRN-----GDYESAFEIFDEMLEEMVRPNS 483
Query: 489 G-FVMLSNICAADGEWHEAENLRKIMK-EKNVQKQP 522
FV + + C+ G+ + ++M+ E +Q +P
Sbjct: 484 ATFVSVLSACSHTGQVDRGLHFFRMMRIEYGLQPKP 519
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 122/297 (41%), Gaps = 43/297 (14%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIP--- 74
+L C +++R G+QVH ++ + + + + LV +Y+ CG SA VF +
Sbjct: 248 VLSACGSLQSIRFGRQVHGVVVKLEAGDGVMVMTALVDMYSKCGFWRSAFEVFTGVEGNR 307
Query: 75 ----------------------------------NPNVFMLNWMVMASAFTGNFQEAIGY 100
P+ N M+ A G EA Y
Sbjct: 308 RNLITWNSMIAGMMLNKESERAVDMFQRLESEGLKPDSATWNSMISGFAQLGECGEAFKY 367
Query: 101 FSLMREF-IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYS 159
F M+ + C K S+ L AC ++ GK++H ++ + D + AL+DMY
Sbjct: 368 FGQMQSVGVAPCLKIVTSL-LSACADSSMLQHGKEIHGLSLRTDINRDDFLVTALVDMYM 426
Query: 160 KCGLLCSARRVF--HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
KCGL AR VF + D W +MI GY + A +F+ M E + PN T+
Sbjct: 427 KCGLASWARGVFDQYDAKPDDPAFWNAMIGGYGRNGDYESAFEIFDEMLEEMVRPNSATF 486
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFK 273
+++++ + G + FF M E G P + ++ +S R +EA L +
Sbjct: 487 VSVLSACSHTGQVDRGLHFFRMMRIEYGLQPKPEHFGCIVDLLGRSGRLSEAQDLME 543
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 7/177 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKI---P 74
LL C S L+ GK++H L D+N L + LV +Y CG + AR VFD+ P
Sbjct: 386 LLSACADSSMLQHGKEIHGLSLRTDINRDDFLVTALVDMYMKCGLASWARGVFDQYDAKP 445
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ F N M+ G+++ A F M E + R N TF VL AC + +G
Sbjct: 446 DDPAFW-NAMIGGYGRNGDYESAFEIFDEMLEEMVRPNSATFVSVLSACSHTGQVDRGLH 504
Query: 135 -VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
+ + G + ++D+ + G L A+ + + E + S++ G C
Sbjct: 505 FFRMMRIEYGLQPKPEHFGCIVDLLGRSGRLSEAQDLMEELAEPPASVFASLL-GAC 560
>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
Length = 826
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 263/514 (51%), Gaps = 6/514 (1%)
Query: 20 LGKCMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
+ C+ + A + +GKQ HA+ N L + + L + + Y G + A ++FD++
Sbjct: 275 VSTCLSASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIEYAEMIFDRMI 334
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+V N ++ G ++AI LMR + + T S ++ A ++K GK+
Sbjct: 335 EKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKE 394
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
V + F +D+ + + +DMY+ CG + A++VF + +D++ W +++S Y
Sbjct: 395 VQCYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAESGL 454
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
EA LF M+LE + PN T+N II S+ R G N A FS+M + G P+LV+W
Sbjct: 455 SGEAFRLFYEMQLESVPPNAITWNLIILSFLRNGQVNEAKEIFSQMQSSGIFPNLVSWTT 514
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M++G Q+ EA+ + M SG++PN ++T L A S+ GR +H + R
Sbjct: 515 MMNGLVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACSNLASLHFGRSVHGYIIRNQ 574
Query: 315 LH-IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
H V ++L+DMY+KCG + A +F ++ +NAMI Y +G V +I L
Sbjct: 575 QHSSSVLIETSLVDMYAKCGDINKAEMVFRSKLCSDLPLYNAMISAYALNGNVKEAIALC 634
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
R+ + G++ + +T S+LSAC+H G V + +EIF M ++G+K EHY +VD+L
Sbjct: 635 RRLEDTGIKPDNITFTSLLSACNHAGDVSQAVEIFTDMVSKHGIKPCLEHYGLMVDILAS 694
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G +A L+ ++P M + CN+ + +L + E +V +
Sbjct: 695 AGETDKALRLIEEMPYKSDARMIQSLVASCNMKHKTELMDFLSRHLLETEPENSGNYVTI 754
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
SN A +G W E R++MK K ++K PG S +
Sbjct: 755 SNAYAVEGSWDEVVKTREMMKAKRLKKSPGCSWI 788
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 228/469 (48%), Gaps = 47/469 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIP 74
+L C+ + L GKQ+HA + N + ++ +++KLV YA C ++ ++F K+
Sbjct: 74 ILQGCVYERDLCTGKQIHARILKNG-DFYAKNEYIETKLVIFYAKCDAFEASEVLFSKLR 132
Query: 75 NPNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
NV+ ++ G +EA+ G+ +++ I+ N F V KAC L + G+
Sbjct: 133 VRNVYSWAAIIGVKCRIGLCEEALMGFVEMLQNEIFPDN-FVVPNVCKACGALQWSRFGR 191
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH + G + V V ++L DMY KCG+L AR+VF + ER+VV+W +++ GY
Sbjct: 192 GVHGYVVKSGLHDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNG 251
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR------------------------GD 229
+EA+ L M+ EG+EP + T + +++ A G
Sbjct: 252 MNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMDGIEEGKQSHAIAIVNGLELDNILGT 311
Query: 230 SNAAF-----------AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
SN F F RM + D+VTWN +ISG+ Q +A+ + + M +
Sbjct: 312 SNLNFYCKVGLIEYAEMIFDRMIEK----DVVTWNLLISGYVQQGLVEDAIHMCQLMRLE 367
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+K + VT++ ++ A T ++++G+E+ R D+ S +DMY+ CGS+ DA
Sbjct: 368 NLKYDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFASDIVLASTAVDMYANCGSIIDA 427
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+ +F+ K++ WN ++ Y + G+ + LF M E + N +T ++ +
Sbjct: 428 KKVFDSVLAKDLILWNTLLSVYAESGLSGEAFRLFYEMQLESVPPNAITWNLIILSFLRN 487
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
G V + EIF M+ G+ + + +++ L ++G EA LR++
Sbjct: 488 GQVNEAKEIFSQMQSS-GIFPNLVSWTTMMNGLVQNGCSEEAILFLRKM 535
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 142/558 (25%), Positives = 240/558 (43%), Gaps = 93/558 (16%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLN--IFSLKSKLVGVYAGCGD 62
IFP N + N + C + R G+ VH + + L+ +F + S L +Y CG
Sbjct: 167 IFPDNFVVPN----VCKACGALQWSRFGRGVHGYVVKSGLHDCVF-VASSLADMYGKCGV 221
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
++ AR VFD+IP NV N +++ G +EAI S MR+ + T S L A
Sbjct: 222 LDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSA 281
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
+ I++GKQ HA+A G E D +G + ++ Y K GL+ A +F M E+DVV+W
Sbjct: 282 SANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIEYAEMIFDRMIEKDVVTW 341
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD------------- 229
+ISGY V++A+ + + M+LE L+ + T + ++++ AR +
Sbjct: 342 NLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQCYCIR 401
Query: 230 ---------SNAAFAFFS---------RMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
++ A ++ ++ DL+ WN ++S +A+S EA +L
Sbjct: 402 HSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAESGLSGEAFRL 461
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F M + + PN +T ++ + G + +EI + + G+
Sbjct: 462 FYEMQLESVPPNAITWNLIILSFLRNGQVNEAKEIFSQMQSSGI---------------- 505
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
N+ SW M+ ++G + +I +M E G+R N ++
Sbjct: 506 ---------------FPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSITVA 550
Query: 392 LSACS-----HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG-----RMVEAY 441
LSACS H G G I R+ + V I +VDM + G MV
Sbjct: 551 LSACSNLASLHFGRSVHGY-IIRNQQHSSSVLIETS----LVDMYAKCGDINKAEMVFRS 605
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNICAA 499
L +P+Y N+M A+ ++G A+ + + G+ KPD F L + C
Sbjct: 606 KLCSDLPLY--NAMISAYA----LNGNVKEAIALCRRLEDTGI-KPDNITFTSLLSACNH 658
Query: 500 DGEWHEAENLRKIMKEKN 517
G+ +A + M K+
Sbjct: 659 AGDVSQAVEIFTDMVSKH 676
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 180/391 (46%), Gaps = 36/391 (9%)
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG--FENDV 148
+G +EA+ + M R + +L+ CV D+ GKQ+HA + G + +
Sbjct: 46 SGEIREALSLLTEMDFRKLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGDFYAKNE 105
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
+ L+ Y+KC ++ +F + R+V SW ++I C + +EA++ F M
Sbjct: 106 YIETKLVIFYAKCDAFEASEVLFSKLRVRNVYSWAAIIGVKCRIGLCEEALMGFVEMLQN 165
Query: 209 GLEPNQFTYNAIIAS-----YARRGDSNAAF---------AFFSRMTAEGF--------- 245
+ P+ F + + ++R G + F + A+ +
Sbjct: 166 EIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSGLHDCVFVASSLADMYGKCGVLDDA 225
Query: 246 ------VPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+P+ +V WNA++ G+ Q+ EA++L M GI+P VTV+ L A
Sbjct: 226 RKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANM 285
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
I+ G++ HA+ GL +D G++ ++ Y K G ++ A +F+ K+V +WN +I
Sbjct: 286 DGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLI 345
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI-FRSMKERYG 416
Y + G+V+ +I + + M E ++ + VTL +++SA + ++ G E+ ++ +
Sbjct: 346 SGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFA 405
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
I A VDM G +++A + V
Sbjct: 406 SDIVLASTA--VDMYANCGSIIDAKKVFDSV 434
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 269/533 (50%), Gaps = 55/533 (10%)
Query: 10 NLSVNYLDCLLGKCM------------KSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGV 56
N S + + LL C+ SK L Q Q+H + T L++ L+ +
Sbjct: 112 NQSFAFYNSLLSSCIYPNRSTFLFLLQASKFLSQVMQIHCHAIITGSFYYGYLQNTLMKI 171
Query: 57 YAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTF 116
Y + A VF ++ P+ N M+ A G+ EA+ + M + ++FT
Sbjct: 172 YLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTM 231
Query: 117 SIVLKACVGLLDIKKGKQVHAVATQMGF--ENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
+L C L D + GK VHA + G +++ + NAL+DMY KC L A+ +F+ +
Sbjct: 232 LGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVI 291
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
+D +SW N +IA YA+ G+ A
Sbjct: 292 VRKDTISW-----------------------------------NTMIAGYAKVGNLEIAH 316
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
FF M DLV+WN++I+G+AQ +LF+ M+ I P+ VT+ ++ A
Sbjct: 317 NFFEDMPCR----DLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIINLVSAA 372
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
G++ GR IH V RM + ID F GSA IDMY KCGS+K A +F K+V W
Sbjct: 373 AEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREVTEKDVTVWT 432
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
MI + HG +++LF M +E + N+VT ++VL+ACSH G V +GL IF SMKER
Sbjct: 433 TMITGFAFHGYGSKALQLFYEM-QEYVMPNQVTFVAVLTACSHSGFVSQGLRIFNSMKER 491
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVT 474
YG++ EHY C+VD+L RSGR E D++ +PM + S+ GA + C +G ++A
Sbjct: 492 YGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGAVLSACRAYGNIEIAEI 551
Query: 475 MGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
G+E ++ K G+V+LSNI A G W ++ +R+IM+ + V+K G S V
Sbjct: 552 AGKELLKLEPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGVKKTAGCSSV 604
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/565 (31%), Positives = 292/565 (51%), Gaps = 41/565 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C L+ GKQ+HA + ++ + S + L+ Y CG V + + +FD++
Sbjct: 246 LSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLD 305
Query: 75 NPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
N+ ++W M + + N EA+ M ++ +++ S VL +C + ++ G
Sbjct: 306 VKNI--ISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHG 363
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+Q+H+ ++ E+D V NALIDMYSKC L A+RVF + VV + +MI GY
Sbjct: 364 RQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQ 423
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTY-------------------NAIIASYARRGD---S 230
+ A+ +F+ M+L+ + P+ T+ + +I Y D S
Sbjct: 424 GYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTS 483
Query: 231 NAAFAFFS--------RMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+A +S R EG D+V WN++ SG+ + EA KL+ + +S +
Sbjct: 484 SALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRER 543
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN T + A + S+ G++ H V +MGL D F +AL+DMY+KCGS+++A +
Sbjct: 544 PNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKI 603
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F + K+ A WN+MI Y +HG V+ ++ +FE M+ + N VT +SVLSACSH G V
Sbjct: 604 FSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFV 663
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
E GL+ + SM RYG++ EHYA VV +L R+GR+ EA + + ++ + + + +
Sbjct: 664 EDGLQHYNSMA-RYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLS 722
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C + G +LA E + +VMLSNI A+ G W + + LR M V K+
Sbjct: 723 ACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKE 782
Query: 522 PGFSRVEKRNE---FVEKE-VQNES 542
PG S +E E FV ++ V +E+
Sbjct: 783 PGQSWIEVNGEVHIFVSRDKVHDET 807
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 222/440 (50%), Gaps = 58/440 (13%)
Query: 19 LLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL + +K++ ++VH +L ++F L + L+ Y G V A +FDK+PN
Sbjct: 46 LLLAPVSNKSILYYRKVHCQVVLWGLQYDVF-LSNLLLHSYFKIGSVFDAGTLFDKMPNR 104
Query: 77 NVFMLNWMVMASAFT--GNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
N +++W + S +T G ++A+ YF R + + N++ + +++ACV + G
Sbjct: 105 N--LVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGS 162
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
QVH+ + GF DV VG +L+ +Y+K G + AR VF G+ + V+WT++I+GY
Sbjct: 163 QVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSG 222
Query: 194 KVDEAVVLFERMKLEGLEPNQF-----------------------------------TYN 218
+ + ++ LF M + P+++ TYN
Sbjct: 223 RSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYN 282
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+I Y + G A A F R+ V ++++W MI+G+ Q+ + EA++L M
Sbjct: 283 VLIDFYTKCGRVKAGKALFDRLD----VKNIISWTTMIAGYMQNSYDWEAVELVGEMFRM 338
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G KP+ + VL + G ++Q GR+IH+ V ++ L D F +ALIDMYSKC +L DA
Sbjct: 339 GWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDA 398
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV------- 391
+ +F++ +V +NAMI Y + G + ++E+F+ M + + + +T +S+
Sbjct: 399 KRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAAL 458
Query: 392 ----LSACSHGGLVEKGLEI 407
LS HG +++ G +
Sbjct: 459 LCLQLSKQIHGLIIKYGFSL 478
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 249/512 (48%), Gaps = 54/512 (10%)
Query: 8 INNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNS 65
++ L+ L ++ C++ G QVH+ + + +++ + + LV +YA G+++
Sbjct: 137 VDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVY-VGTSLVVLYAKHGEIDK 195
Query: 66 ARLVFD----KIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIV 119
ARLVFD K P + W + + +T G + ++ F+LM E +K+ S +
Sbjct: 196 ARLVFDGLVLKTP------VTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSI 249
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
L AC L +K GKQ+HA + + DVS N LID Y+KCG + + + +F + +++
Sbjct: 250 LNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNI 309
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS--------YARRGDS- 230
+SWT+MI+GY S EAV L M G +P+++ ++++ S + R+ S
Sbjct: 310 ISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSY 369
Query: 231 -------------NAAFAFFSRMTA---EGFVPDLVT------WNAMISGFAQSKRENEA 268
NA +S+ A V D+VT +NAMI G+++ A
Sbjct: 370 VIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGA 429
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L++F+ M + + P+ +T +L +Q+ ++IH L+ + G +D FT SALID+
Sbjct: 430 LEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDV 489
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
YSKC ++DAR +FE T K++ WN++ Y + + +L+ + R NE T
Sbjct: 490 YSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTF 549
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
++ +A S + G + F + + G++ +VDM + G + EA +
Sbjct: 550 AALTTAASILASLPHGQQ-FHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSV 608
Query: 449 MYVT---NSMAGAFRNGCNIHGRRDLAVTMGE 477
T NSM + HG+ + A+ M E
Sbjct: 609 WKDTACWNSMISMYAQ----HGKVEEALRMFE 636
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 168/357 (47%), Gaps = 47/357 (13%)
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
++VH G + DV + N L+ Y K G + A +F M R++VSW+S++S Y +
Sbjct: 60 RKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQL 119
Query: 193 SKVDEAVVLFER---------------------MKLEGLEPNQFTYNAIIAS-------- 223
++A++ F ++ +G EP ++ +I S
Sbjct: 120 GYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYV 179
Query: 224 -------YARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGM 275
YA+ G+ + A R+ +G V VTW A+I+G+ +S R +L+LF M
Sbjct: 180 GTSLVVLYAKHGEIDKA-----RLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLM 234
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+ S + P+ ++ +L A + G ++ G++IHA V R +DV T + LID Y+KCG +
Sbjct: 235 MESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRV 294
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
K + LF+ +KN+ SW MI Y ++ ++EL M G + +E SVL++C
Sbjct: 295 KAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSC 354
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
++ G +I Y +K+ EH V + L A D ++V VT
Sbjct: 355 GSVDALQHGRQI-----HSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVT 406
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 21/239 (8%)
Query: 276 LVSGIKPNNVTVTG-----VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
++ NV V G +L A SI R++H V GL DVF + L+ Y
Sbjct: 27 MLPSFSSQNVKVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYF 86
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM-RANEVTLI 389
K GS+ DA TLF+ +N+ SW++++ Y + G + ++ F + + NE L
Sbjct: 87 KIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILA 146
Query: 390 SVLSACSHGGLVEKGLEIFRS-MKERYGVKISKEHYACVVDMLCRSGRMVEA---YD-LL 444
S++ AC E G ++ +K +G + +V + + G + +A +D L+
Sbjct: 147 SIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVG--TSLVVLYAKHGEIDKARLVFDGLV 204
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICAADG 501
+ P+ T + G ++ GR ++++ + E + PD +V+ S N C+ G
Sbjct: 205 LKTPVTWTAIITGYTKS-----GRSEVSLQLFNLMMESNV-IPDKYVLSSILNACSVLG 257
>gi|357162206|ref|XP_003579338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g20730-like [Brachypodium distachyon]
Length = 558
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 289/549 (52%), Gaps = 49/549 (8%)
Query: 19 LLGKCMKSKALRQGKQVH-ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL CM R+G+ VH ++ + + +KLV YA GDV +AR VFD +P+ +
Sbjct: 19 LLQSCMS--CFRRGRSVHHQIIASAAPPDLHMSTKLVIFYAKHGDVAAARKVFDGMPHRS 76
Query: 78 VFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
V ++W M S ++ N Q EA+ F+LM R N+FT+ V AC G ++ G+QV
Sbjct: 77 V--VSWTAMVSGYSRNGQTREALDLFTLMLASGVRPNQFTYGSVASACAGAGCVRSGEQV 134
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA + F DV V +AL+DM+ +CG + A ++F M +DVV+W +++ G ++
Sbjct: 135 HACVAKGRFVGDVFVQSALMDMHLRCGSVVDAMQLFAEMERKDVVAWNALLRGLVERAQY 194
Query: 196 DEAVVLFERMKLEGLEPNQFTY-----------------------------------NAI 220
+A+ L M + P+ FT+ +I
Sbjct: 195 GDALGLLPSMLRGAMLPDHFTFGSALKACGAVSVLANVELIHTCIIKLGYWGEKVVIGSI 254
Query: 221 IASYAR-RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE-ALKLFKGMLVS 278
I +YA+ RG S+A + S PDLV+ A+ISG++ + +E A++LF +
Sbjct: 255 IDAYAKCRGLSSARLIYDSICE-----PDLVSSTALISGYSMDRNHSEDAMELFCKIHRK 309
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G++ + V ++ +L S++ G +IHA +C+ DV +A++DMY+K G DA
Sbjct: 310 GLRIDGVLLSSLLGLCANVASLRFGTQIHAYMCKRQPMTDVALDNAVVDMYAKAGEFADA 369
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
R F+ +NV SW ++I GK+G + ++ LF+RM+E+G++ N+VT +S+LSAC H
Sbjct: 370 RRAFDEMPYRNVVSWTSLITACGKNGFGEDAVSLFDRMVEDGVKPNDVTFLSLLSACGHS 429
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GL KG+E F SM +YG+ EHY+ +D+L R G++ +A+ L++ + + +SM GA
Sbjct: 430 GLTSKGMEYFTSMMSKYGIDPRAEHYSSAIDLLARGGQLKDAWKLVQNIDIEPNSSMFGA 489
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C HG L T + F + + +L+N+ A W +A+ RK+M E +
Sbjct: 490 MLGACKTHGSMPLGETAAKNLFTIAPESSVHYAVLANMYAESSLWEDAQRTRKLMAETSG 549
Query: 519 QKQPGFSRV 527
K G S +
Sbjct: 550 GKVAGCSVI 558
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/535 (32%), Positives = 278/535 (51%), Gaps = 55/535 (10%)
Query: 17 DCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPN 75
D ++ + R +VHA L+ S L +++V + G V A VF ++
Sbjct: 14 DAVMASLRACASFRDLLRVHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATRVFSQVRE 73
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLM---REFIY-RC---NKFTFSIVLKACVGLLD 128
PN+ + N M+ A A +AI + M R F + C ++FT+ +LKAC GL+
Sbjct: 74 PNLHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACGGLMA 133
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
+ GKQVH + G E++ V N+LI+MY++ G L AR+VF GM ERDVVSW
Sbjct: 134 LDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSW------ 187
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
N +I+++AR G A A F+ M PD
Sbjct: 188 -----------------------------NTVISAHARLGQMRKARAVFNSM------PD 212
Query: 249 --LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
+V+W A++SG+ + + A++ F+ M + G +P++V++ VL A G++++GR I
Sbjct: 213 KTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFEPDDVSIVAVLPACAQLGALELGRWI 272
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
+A R + + + +AL++MY+KCG + A LF K+V SW+ M+G HG
Sbjct: 273 YAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQLFNGMAEKDVISWSTMVGGLAAHGRA 332
Query: 367 DSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
+++LF M +G ++ N +T + +LSACSH GL+++GL+ F M + YG++ EHY
Sbjct: 333 QEAVQLFTEMERQGTVKPNGITFVGLLSACSHAGLLDEGLDYFDRMNDVYGIEPGVEHYG 392
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
C+VD+LCRSG++ DL+ +P+ + G+ N C HG D AV E +
Sbjct: 393 CIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSVLNACRSHGDVDTAVLAAERLVALEPE 452
Query: 486 KPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFVEKE 537
VML+N+ AA W E N RK ++ ++++K PG S +E N EFV E
Sbjct: 453 DVGNLVMLANVYAAARRWSEVANTRKAIRSRSMRKTPGCSLIEVDNVVQEFVAGE 507
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/568 (30%), Positives = 277/568 (48%), Gaps = 75/568 (13%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAG 59
+ R + P N + L + C AL+ +QVH + + + S ++S LV +Y
Sbjct: 106 LTRGLMPDNRV----LPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIK 161
Query: 60 CGDVNSARLVFDKIPNPNVF---------------------------------MLNWMVM 86
C + A VFD++ P+V +++W M
Sbjct: 162 CNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGM 221
Query: 87 ASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ F +G + EA+ F M + + T S VL A L D+ G +H + G
Sbjct: 222 IAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGL 281
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+D V +ALIDMY KC +VF M DV G CN
Sbjct: 282 VSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDV--------GSCN------------- 320
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
A I +R G ++ F ++ +G ++V+W +MI+ +Q+ R
Sbjct: 321 --------------AFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGR 366
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+ EAL+LF+ M ++G+KPN+VT+ +L A G ++ G+ H R G+ DV+ GSA
Sbjct: 367 DMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSA 426
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
LIDMY+KCG ++ +R F+ KN+ WNA+I Y HG ++E+F+ M G + +
Sbjct: 427 LIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPD 486
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
++ VLSACS GL E+G F SM +YG++ EHYAC+V +L R+G++ +AY ++
Sbjct: 487 IISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMI 546
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
R++P+ + GA + C +H L E+ FE+ P +++LSNI A+ G W+
Sbjct: 547 RRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWN 606
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRNE 532
E +R +MK K ++K PG S +E +N+
Sbjct: 607 EVNRVRDMMKNKGLRKNPGCSWIEVKNK 634
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 202/422 (47%), Gaps = 40/422 (9%)
Query: 8 INNLSVNYLDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSA 66
++++ L+CL + +L Q +Q HA +L T N L +KL+ YA A
Sbjct: 11 LDSVQHTILNCLNST---TASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADA 67
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
LV D +P PNVF + ++ A + F A+ FS M + +KAC GL
Sbjct: 68 TLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGL 127
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
+K +QVH +A+ GF++D V ++L+ MY KC + A RVF MFE DVVSW++++
Sbjct: 128 SALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALV 187
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
+ Y VDEA LF M G++PN ++N +IA + G + A F M GF
Sbjct: 188 AAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFE 247
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
PD T++ VL A G + +G I
Sbjct: 248 PD-----------------------------------GTTISSVLPAVGDLEDLVMGILI 272
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H V + GL D SALIDMY KC + +F+ +V S NA I ++G V
Sbjct: 273 HGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQV 332
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
+SS+ LF ++ ++GM N V+ S+++ CS G + LE+FR M + GVK + C
Sbjct: 333 ESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREM-QIAGVKPNSVTIPC 391
Query: 427 VV 428
++
Sbjct: 392 LL 393
>gi|296088310|emb|CBI36755.3| unnamed protein product [Vitis vinifera]
Length = 751
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 292/534 (54%), Gaps = 21/534 (3%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVG--VYAGCGDVNSARLV 69
N + LL KC K + + K++H L+ T + ++ L S+LV Y+ G++N A+ V
Sbjct: 6 NSILSLLEKC---KTMAELKRLHGLMITTSVIQDVIPL-SRLVDFCAYSDSGNLNYAKSV 61
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
F++I P++++ N M+ + + + EA+ + MR+ Y + FTF VLKAC +
Sbjct: 62 FNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGY 121
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
G+ VH + GFE DV AL+ MY+ CG + +A +VF + + +VV+WTS+I+G
Sbjct: 122 NLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGC 181
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP-- 247
+ EAV +++ M+L + PN+ T ++ + AR D NA R G P
Sbjct: 182 ISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQ 241
Query: 248 -----DLVTWNAMISGFA-----QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+++ A++ +A Q + NEAL LF M ++G P+ T V+ A
Sbjct: 242 SNSNFNVILATAIVDMYAKCAYNQYGQANEALDLFSDMRIAGFDPDKATFLCVIGACAHL 301
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
G++ G+ +HA V + L D G+AL+DMY+K G + A+ +F + K+V +W ++I
Sbjct: 302 GALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLI 361
Query: 358 GCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
HG + ++ F++M E+ + +E+T I VLSACSH G VE G F SMK +G
Sbjct: 362 IGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVGKVEDGKNHFISMKNVHG 421
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
++ + +HY C+VD+L R+GR+ EA L+ ++P+ ++ A NGC I+ D+A +
Sbjct: 422 IEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSALLNGCKIYQNIDVADRVR 481
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
E+ + +V+LSNI A W E + R++MKE+ +QK G S VE +
Sbjct: 482 RRVRELEVDGSGVYVLLSNIYAGACRWEEVKMARELMKERKIQKSLGHSSVEMK 535
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 285/546 (52%), Gaps = 39/546 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + ++ G ++H L L+ + + LV +Y+ CG + A+++FDK N
Sbjct: 140 VLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKN 199
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR----CNKFTFSIVLKACVGLLDIKKGK 133
N M+ G EA F+L RE + N+ T +L AC+ + ++ K
Sbjct: 200 AVSWNTMIGGLCTKGYIFEA---FNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLK 256
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
++H + + GF+ D V N + Y+KCG+L A RVF+ M + V SW ++I G
Sbjct: 257 ELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNG 316
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFV-- 246
+A+ L+ +M GL P+ FT +++ + A R G F + + F+
Sbjct: 317 DPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGI 376
Query: 247 ------------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
V+WNAMISG++Q+ +AL LF+ ++ G +P
Sbjct: 377 SLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQP 436
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+++ V VL A ++++G+E H + L DVF + IDMY+K G +K++R++F
Sbjct: 437 SDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVF 496
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ + K++ASWNA+I YG HG + SIELFERM + G + T I +L+ CSH GLVE
Sbjct: 497 DGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVE 556
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+GL+ F M+ +G++ EHYACV+DML R+GR+ +A L+ ++P + + + +
Sbjct: 557 EGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSF 616
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C G ++ + E+ E+ + + +V LSN+ A G W + +R+++K+ +QK
Sbjct: 617 CRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDA 676
Query: 523 GFSRVE 528
G S +E
Sbjct: 677 GCSWIE 682
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 163/362 (45%), Gaps = 36/362 (9%)
Query: 94 FQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGN 152
+ +AI F L+ + + + FTF V+KAC G LD G+ +H + +MG DV VGN
Sbjct: 11 YSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGN 70
Query: 153 ALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC-NVSKVDEAVVLFERMK-LEGL 210
ALI MY K G + +A +VFH M R++VSW S+ISG+ N D +L E M EGL
Sbjct: 71 ALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGL 130
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL--------------------- 249
P+ T ++ AR D G D+
Sbjct: 131 LPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQM 190
Query: 250 ----------VTWNAMISGFAQSKRENEALKLFKGM-LVSGIKPNNVTVTGVLQAGGLTG 298
V+WN MI G EA LF+ M + I+ N VTV +L A
Sbjct: 191 LFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEIS 250
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++ +E+H R G D + + Y+KCG L A +F K V SWNA+IG
Sbjct: 251 QLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIG 310
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
++G ++ L+ +M G+ + T+ S+L A +H + G E+ R+G++
Sbjct: 311 GCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEV-HGFVLRHGLE 369
Query: 419 IS 420
I
Sbjct: 370 ID 371
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/546 (31%), Positives = 280/546 (51%), Gaps = 36/546 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C K AL KQ+H + L+ SL + L+ +Y+ G + AR VFD + N N
Sbjct: 240 VLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRN 299
Query: 78 VFMLNWMVMASAFTGNFQEAIGYF-----SLMREFI------------------------ 108
N M+ + A G +A F S M+ I
Sbjct: 300 TSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQ 359
Query: 109 ------YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
++ N + + VL+A L + GK+ H + GF+ DV VG +LIDMY K
Sbjct: 360 RMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNH 419
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
L SA+ VF M R++ +W S++SGY ++A+ L +M+ EG++P+ T+N +I+
Sbjct: 420 SLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMIS 479
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA G A A + + G P++V+W A+ISG +Q+ ++LK F M G+ P
Sbjct: 480 GYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMP 539
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N+ ++T +L+A +Q G+EIH L R G DVF +ALIDMYSK SLK+A +F
Sbjct: 540 NSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVF 599
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ K +ASWN MI + G+ +I +F M + G+ + +T ++LSAC + GL+
Sbjct: 600 RRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIG 659
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G + F SM Y + EHY C+VD+L R+G + EA+DL+ +P+ ++ GA
Sbjct: 660 EGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGS 719
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IH A T + F++ ++++ N+ + W + ++LR++M V+ +
Sbjct: 720 CRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQ 779
Query: 523 GFSRVE 528
+S ++
Sbjct: 780 VWSWIQ 785
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 189/395 (47%), Gaps = 38/395 (9%)
Query: 20 LGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C + + G ++H L DL+++ L+ L+ Y C + A VF ++PNP
Sbjct: 140 LKTCTRVMDIWLGMEIHGCLIKRGFDLDVY-LRCALMNFYGRCWGLEKANQVFHEMPNPE 198
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ N ++ + + Q+ + F M+ + T VL+AC + + KQ+H
Sbjct: 199 ALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHG 258
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ G ++DVS+ N LI MYSK G L ARRVF M R+ SW SMIS Y + +++
Sbjct: 259 YVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLND 318
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
A LF ++ ++P+ T+N +++ + G RM EGF
Sbjct: 319 AWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGF------------ 366
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
KPN+ ++T VLQA G + +G+E H V R G
Sbjct: 367 -----------------------KPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDC 403
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
DV+ G++LIDMY K SL A+ +F+ + +N+ +WN+++ Y GM + ++ L +M
Sbjct: 404 DVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQME 463
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
+EG++ + VT ++S + G ++ L + K
Sbjct: 464 KEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTK 498
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 133/314 (42%), Gaps = 35/314 (11%)
Query: 133 KQVHA--VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY- 189
K +HA + + D + N LI Y G SA VF+ R+ + W S + +
Sbjct: 50 KMMHAQMIKLPQKWNPDAAAKN-LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFK 108
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV--- 246
+ + + +F+ + +G+ + Y+ + + R D + GF
Sbjct: 109 SSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDV 168
Query: 247 ----------------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
P+ + WN I QS++ + ++LF+ M S
Sbjct: 169 YLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFS 228
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+K T+ VLQA G G++ ++IH V R GL DV + LI MYSK G L+ A
Sbjct: 229 FLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELA 288
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
R +F+ +N +SWN+MI Y G ++ + LF + M+ + VT +LS
Sbjct: 289 RRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLH 348
Query: 399 GLVEKGLEIFRSMK 412
G E+ L I + M+
Sbjct: 349 GYKEEVLNILQRMQ 362
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
+ CLL C L++GK++H L N ++F + + L+ +Y+ + +A VF +I
Sbjct: 544 ITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVF-VATALIDMYSKSSSLKNAHKVFRRI 602
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG- 132
N + N M+M A G +EAI F+ M++ + TF+ +L AC I +G
Sbjct: 603 QNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGW 662
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
K ++ T + ++D+ + G L A + H M + D W +++ G C
Sbjct: 663 KYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALL-GSCR 721
Query: 192 VSK 194
+ K
Sbjct: 722 IHK 724
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/617 (29%), Positives = 296/617 (47%), Gaps = 95/617 (15%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + +LR G VHA++C N L N+F S +V +Y CG ++ A +FD++
Sbjct: 133 VLKACGEIPSLRHGASVHAIVCANGLGSNVFICNS-IVAMYGRCGALDDAHQMFDEVLER 191
Query: 77 NV-FMLNWMVMASAFTGNFQEAIGYFSLMR-----EFIYRCNKFTFSIVLKACVGLLDIK 130
+ +++W + +A+ Q R R + T +L AC + ++
Sbjct: 192 KIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQ 251
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
GKQVH + + G +DV VGNAL+ MY+KC + A +VF G+ ++DVVSW +M++GY
Sbjct: 252 HGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYS 311
Query: 191 NVSKVDEAVVLFE-----------------------------------RMKLEGLEPNQF 215
+ D A+ LF+ +M+L GLEPN
Sbjct: 312 QIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVV 371
Query: 216 TY------------------------------------------NAIIASYARRGDSNAA 233
T N +I YA+ A
Sbjct: 372 TLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVA 431
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV--SGIKPNNVTVTGVL 291
+ F + EG ++VTW MI G+AQ N+ALKLF + + +KPN T++ L
Sbjct: 432 RSIFDSI--EGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCAL 489
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDV-FTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
A G +++GR++HA R +V + G+ LIDMYSK G + AR +F+ +++NV
Sbjct: 490 MACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNV 549
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SW +++ YG HG + ++ LF++M + G + +T + VL ACSH G+V++G+ F
Sbjct: 550 VSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHD 609
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M + +G+ EHYAC+VD+L R+GR+ EA +L++ + M T + A + IH +
Sbjct: 610 MVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIE 669
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
L + E+G + +LSN+ A W + +R +MK ++K+PG S ++ +
Sbjct: 670 LGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGK 729
Query: 531 NE----FVEKEVQNESK 543
FV ES+
Sbjct: 730 KSTTTFFVGDRSHPESE 746
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 137/533 (25%), Positives = 241/533 (45%), Gaps = 97/533 (18%)
Query: 51 SKLVGVYAGCGDVNSARLVFDK-IP-NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
S VG Y CG A + + IP + VF N ++ S G + +G++ M+
Sbjct: 63 SYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLG 122
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ + +TF VLKAC + ++ G VHA+ G ++V + N+++ MY +CG L A
Sbjct: 123 WLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAH 182
Query: 169 RVFHGMFER---DVVSWTSMISGYCNVSKVDEAVVLFERM------KLE----------- 208
++F + ER D+VSW S+++ Y + A+ + RM KL
Sbjct: 183 QMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILP 242
Query: 209 ---------------------GLEPNQFTYNAIIASYAR--------------------- 226
GL + F NA+++ YA+
Sbjct: 243 ACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVS 302
Query: 227 ----------RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
G ++A + F M E D++TW+A+I+G+AQ EAL +F+ M
Sbjct: 303 WNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQ 362
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI-------DVFTGSALIDMY 329
+ G++PN VT+ +L G++ G++ HA V + L++ D+ + LIDMY
Sbjct: 363 LYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMY 422
Query: 330 SKCGSLKDARTLFEIT--RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE--GMRANE 385
+KC S + AR++F+ + KNV +W MIG Y +HG + +++LF ++ ++ ++ N
Sbjct: 423 AKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNA 482
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA-----CVVDMLCRSGRMVEA 440
TL L AC+ G + G ++ Y ++ E C++DM +SG + A
Sbjct: 483 FTLSCALMACARLGELRLGRQL-----HAYALRNENESEVLYVGNCLIDMYSKSGDIDAA 537
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+ + + S + G +HGR + A+ + ++ ++G DG L
Sbjct: 538 RAVFDNMKLRNVVSWT-SLMTGYGMHGRGEEALHLFDQMQKLGF-AVDGITFL 588
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 175/350 (50%), Gaps = 21/350 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI--------FSLKSKLVGVYAGCGDVNSAR 67
L LL C AL GKQ HA + N LN+ + + L+ +YA C AR
Sbjct: 373 LASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVAR 432
Query: 68 LVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLM--REFIYRCNKFTFSIVLKAC 123
+FD I + ++ W VM + G +A+ F+ + ++ + N FT S L AC
Sbjct: 433 SIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMAC 492
Query: 124 VGLLDIKKGKQVHAVATQMGFENDV-SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
L +++ G+Q+HA A + E++V VGN LIDMYSK G + +AR VF M R+VVSW
Sbjct: 493 ARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSW 552
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA 242
TS+++GY + +EA+ LF++M+ G + T+ ++ + + G + +F M
Sbjct: 553 TSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVK 612
Query: 243 E-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
G P + M+ ++ R NEA++L K M ++P V +L A + +I+
Sbjct: 613 GFGITPGAEHYACMVDLLGRAGRLNEAMELIKNM---SMEPTAVVWVALLSASRIHANIE 669
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA---RTLFEITRIK 348
+G + + +G D + + L ++Y+ KD R+L + T I+
Sbjct: 670 LGEYAASKLTELGAEND-GSYTLLSNLYANARRWKDVARIRSLMKHTGIR 718
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 215 FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT---WNAMISGFAQSKRENEALKL 271
F+Y + +Y G S A + R+ +P T WNA+I + ++ L
Sbjct: 62 FSY--AVGAYIECGASAEAVSLLQRL-----IPSHSTVFWWNALIRRSVKLGLLDDTLGF 114
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
+ M G P++ T VL+A G S++ G +HA+VC GL +VF ++++ MY +
Sbjct: 115 YCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGR 174
Query: 332 CGSLKDARTLFEIT---RIKNVASWNAMIGCYGKHGMVDSSIELFERM---LEEGMRANE 385
CG+L DA +F+ +I+++ SWN+++ Y + G +++ + RM +R +
Sbjct: 175 CGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDA 234
Query: 386 VTLISVLSACSHGGLVEKGLEI 407
+TL+++L AC+ ++ G ++
Sbjct: 235 ITLVNILPACASVFALQHGKQV 256
>gi|347954468|gb|AEP33734.1| chlororespiratory reduction 21, partial [Lepidium virginicum]
Length = 788
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/508 (29%), Positives = 267/508 (52%), Gaps = 2/508 (0%)
Query: 27 KALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+ + +GKQ HA+ N L + + L + ++ Y G V A ++FD++ +V N ++
Sbjct: 248 RGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDRMIEKDVVTWNLLI 307
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
G +AI LMR R + T S ++ A ++K GK+V + FE
Sbjct: 308 SGYVQQGLVDDAIHMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFE 367
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+++ + + +DMY+KCG + A++VF E+D++ W ++++ Y + EA+ LF M
Sbjct: 368 SEIVLASTAVDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYADSGLSGEALRLFYDM 427
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
+LE + PN T+N+II S R G + A F +M + G P+L++W M++G Q+
Sbjct: 428 QLESVPPNMITWNSIILSLLRNGQVDEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCS 487
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH-IDVFTGSA 324
EA+ + M SG++PN+ ++T L A S+ GR IH + R H V ++
Sbjct: 488 EEAINFLRKMQESGLRPNSFSITVALSACAHLASLNFGRSIHGYIIRNLQHSSSVSFVTS 547
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+DMY+KCG + A F + +NAMI Y +G + +I L+ R+ + ++ +
Sbjct: 548 LVDMYAKCGDINQAEKAFGSKLYDELPLYNAMISAYALYGNMKEAIALYRRLEDMAIKPD 607
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
+T S+LSACSH G + + + IF M ++G+K EHY +VD+L SG +A +L+
Sbjct: 608 SITFTSLLSACSHAGDIVQAINIFTEMVSKHGMKPCLEHYGLMVDLLASSGETNKALELI 667
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+++P M + N + +L + ++ E +V +SN A +G W
Sbjct: 668 KEMPYKPDARMIQSLVASNNKQHKTELVDYLSKQLLESEPENSGNYVTISNAFAIEGSWD 727
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRNE 532
E +R++MK K ++K+PG S ++ + E
Sbjct: 728 EVVKMREMMKAKGLKKKPGCSWIQIKGE 755
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 229/464 (49%), Gaps = 37/464 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIP 74
+L C+ + L G+Q+HA + N + ++ +++KL+ YA C + A+ +F ++
Sbjct: 36 ILQGCVYERDLCTGQQIHARILKNG-DFYARNQYIETKLLIFYAKCDAIEVAQNLFSRLR 94
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NVF ++ G + A+ F M E + + V KAC L G+
Sbjct: 95 VRNVFSWAAIIGLKCRIGLCEGALTGFVEMIENGVLPDNYVVPNVCKACGALQWTWFGRG 154
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + G + V V ++L DMY KCG+L AR+VF + ER+VV+W +++ GY
Sbjct: 155 VHGYLVKAGLHDCVFVASSLADMYGKCGVLNDARKVFDKIPERNVVAWNALMVGYVQNGM 214
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFV--- 246
+EA+ L M+ EG+EP + T + +++ A G + A A + + + +
Sbjct: 215 NEEAIRLLSDMRKEGIEPTRVTVSTCLSASANIRGIEEGKQSHAIAIVNGLEMDNILGTS 274
Query: 247 -----------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
D+VTWN +ISG+ Q ++A+ + K M + ++ +
Sbjct: 275 ILNFYCKVGLVEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVDDAIHMCKLMRLENLRYD 334
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+VT++ ++ A T ++++G+E+ R ++ S +DMY+KCGS+ DA+ +F+
Sbjct: 335 SVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEIVLASTAVDMYAKCGSIVDAKKVFD 394
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
T K++ WN ++ Y G+ ++ LF M E + N +T S++ + G V++
Sbjct: 395 STVEKDLILWNTLLAAYADSGLSGEALRLFYDMQLESVPPNMITWNSIILSLLRNGQVDE 454
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
E+F M+ G+ + + +++ L ++G EA + LR++
Sbjct: 455 AKEMFLQMQSS-GIFPNLISWTTMMNGLVQNGCSEEAINFLRKM 497
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/529 (25%), Positives = 230/529 (43%), Gaps = 79/529 (14%)
Query: 32 GKQVHALLCTNDLN--IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G+ VH L L+ +F + S L +Y CG +N AR VFDKIP NV N +++
Sbjct: 152 GRGVHGYLVKAGLHDCVF-VASSLADMYGKCGVLNDARKVFDKIPERNVVAWNALMVGYV 210
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
G +EAI S MR+ + T S L A + I++GKQ HA+A G E D
Sbjct: 211 QNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANIRGIEEGKQSHAIAIVNGLEMDNI 270
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+G ++++ Y K GL+ A +F M E+DVV+W +ISGY VD+A+ + + M+LE
Sbjct: 271 LGTSILNFYCKVGLVEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVDDAIHMCKLMRLEN 330
Query: 210 LEPNQFTYNAIIASYARRGD----------------------SNAAFAFFSRMTA----- 242
L + T + ++++ AR + ++ A +++ +
Sbjct: 331 LRYDSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEIVLASTAVDMYAKCGSIVDAK 390
Query: 243 ----EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
DL+ WN +++ +A S EAL+LF M + + PN +T ++ + G
Sbjct: 391 KVFDSTVEKDLILWNTLLAAYADSGLSGEALRLFYDMQLESVPPNMITWNSIILSLLRNG 450
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
+ +E+ + G+ N+ SW M+
Sbjct: 451 QVDEAKEMFLQMQSSGI-------------------------------FPNLISWTTMMN 479
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
++G + +I +M E G+R N ++ LSAC+H + G I +
Sbjct: 480 GLVQNGCSEEAINFLRKMQESGLRPNSFSITVALSACAHLASLNFGRSIHGYIIRNLQHS 539
Query: 419 ISKEHYACVVDMLCRSGRMVEA-----YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAV 473
S +VDM + G + +A L ++P+Y N+M A+ ++G A+
Sbjct: 540 SSVSFVTSLVDMYAKCGDINQAEKAFGSKLYDELPLY--NAMISAYA----LYGNMKEAI 593
Query: 474 TMGEEFFEMGLRKPDG--FVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+ +M + KPD F L + C+ G+ +A N+ M K+ K
Sbjct: 594 ALYRRLEDMAI-KPDSITFTSLLSACSHAGDIVQAINIFTEMVSKHGMK 641
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 189/410 (46%), Gaps = 45/410 (10%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG--FENDVS 149
G +EA+ M R + +L+ CV D+ G+Q+HA + G + +
Sbjct: 9 GEIREALRLVKEMEFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGDFYARNQY 68
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+ L+ Y+KC + A+ +F + R+V SW ++I C + + A+ F M G
Sbjct: 69 IETKLLIFYAKCDAIEVAQNLFSRLRVRNVFSWAAIIGLKCRIGLCEGALTGFVEMIENG 128
Query: 210 LEPN--------------QFTY---------------------NAIIASYARRGDSNAAF 234
+ P+ Q+T+ +++ Y + G N A
Sbjct: 129 VLPDNYVVPNVCKACGALQWTWFGRGVHGYLVKAGLHDCVFVASSLADMYGKCGVLNDAR 188
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F ++ ++V WNA++ G+ Q+ EA++L M GI+P VTV+ L A
Sbjct: 189 KVFDKIPER----NVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSAS 244
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
I+ G++ HA+ GL +D G+++++ Y K G ++ A +F+ K+V +WN
Sbjct: 245 ANIRGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDRMIEKDVVTWN 304
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
+I Y + G+VD +I + + M E +R + VTL +++SA + ++ G E+ + R
Sbjct: 305 LLISGYVQQGLVDDAIHMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKEV-QCYCIR 363
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRN 461
+ + + VDM + G +V+A +D + + + N++ A+ +
Sbjct: 364 HCFESEIVLASTAVDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAD 413
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 17/178 (9%)
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG- 314
+S + EAL+L K M ++ +LQ + G++IHA + + G
Sbjct: 2 VSSLCKHGEIREALRLVKEMEFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGD 61
Query: 315 -LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
+ + + L+ Y+KC +++ A+ LF R++NV SW A+IG + G+ + ++ F
Sbjct: 62 FYARNQYIETKLLIFYAKCDAIEVAQNLFSRLRVRNVFSWAAIIGLKCRIGLCEGALTGF 121
Query: 374 ERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE----IFRSMKERYG 416
M+E G+ + + +V AC HG LV+ GL + S+ + YG
Sbjct: 122 VEMIENGVLPDNYVVPNVCKACGALQWTWFGRGVHGYLVKAGLHDCVFVASSLADMYG 179
>gi|347954458|gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
Length = 788
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/531 (29%), Positives = 271/531 (51%), Gaps = 6/531 (1%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVY 57
RL+ + V + C+ + A + +GKQ HAL N L + + L + ++ Y
Sbjct: 216 RLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKQSHALAVVNGLELDNILGTSVLNFY 275
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
G V A +VFD++ +V N ++ G ++AI LMR + + T S
Sbjct: 276 CKVGLVEYAEMVFDRMVGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLS 335
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
++ + K GK+V + FE+D+ + + +DMY+KCG + A++VF ++
Sbjct: 336 TLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQK 395
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
D++ W ++++ Y EA+ LF M+LE + PN T+N II S R G + A F
Sbjct: 396 DLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKKMF 455
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+M + G VP +V+W M++G Q+ EA+ + M G++PN ++T L A
Sbjct: 456 LQMQSSGIVPTIVSWTTMMNGLVQNGCSEEAIHYLRKMQEYGMRPNVFSITVALSACANL 515
Query: 298 GSIQIGREIHALVCRMGLH-IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
S+ GR +H + R LH V ++L+DMY+KCG + A +F + +NAM
Sbjct: 516 ASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFSELPLYNAM 575
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I Y +G V+ ++ L+ + + G++ + +T ++LSAC+H G + + +EIF M ++G
Sbjct: 576 ISAYALYGNVEEAMALYRSLDDMGIKPDNITFTNILSACNHAGDINQAIEIFSDMVSKHG 635
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
VK EHY +VD+L +G +A L+ ++P M + CN + +L +
Sbjct: 636 VKPCLEHYGLMVDLLASAGETEKALRLMEEMPYEPDARMIQSLLATCNKEHKTELVEYLS 695
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
++ E +V +SN A +G W E +R++MK K ++KQPG S +
Sbjct: 696 KQLLESEPDNSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKQPGCSWI 746
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 232/468 (49%), Gaps = 39/468 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIP 74
+L C+ + G+Q+HA + N + ++ +++KLV YA C + A ++F K+
Sbjct: 32 ILQGCVYERDFHTGQQIHARILKNG-DFYAKNEYIETKLVIFYAKCDALEIAEVLFSKLR 90
Query: 75 NPNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
NVF ++ G + A+ G+ ++++ I+ N F V KAC L G+
Sbjct: 91 VRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFPDN-FVVPNVCKACGALQWRGFGR 149
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH + G ++ V V ++L DMY KCG+L AR+VF + ER+VV+W +++ GY
Sbjct: 150 GVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNG 209
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAF------------ 236
+EA+ L M+ EG+EP + T + +++ A G + A A
Sbjct: 210 MNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKQSHALAVVNGLELDNILGT 269
Query: 237 -------------FSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
++ M + V D+VTWN +ISG+ Q +A+++ K M + +K
Sbjct: 270 SVLNFYCKVGLVEYAEMVFDRMVGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKF 329
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ VT++ ++ T + ++G+E+ R D+ S +DMY+KCGS+ DA+ +F
Sbjct: 330 DCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVF 389
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ T K++ WN ++ Y + G+ ++ LF M E + N +T ++ + G V+
Sbjct: 390 DSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVD 449
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY 450
+ ++F M+ G+ + + +++ L ++G EA LR++ Y
Sbjct: 450 EAKKMFLQMQSS-GIVPTIVSWTTMMNGLVQNGCSEEAIHYLRKMQEY 496
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 187/408 (45%), Gaps = 45/408 (11%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG--FENDVS 149
G +EA+ + M R + +L+ CV D G+Q+HA + G + +
Sbjct: 5 GEIKEALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGQQIHARILKNGDFYAKNEY 64
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+ L+ Y+KC L A +F + R+V SW ++I C + V+ A++ F M +
Sbjct: 65 IETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDE 124
Query: 210 LEPNQFTYNAIIAS----------------YARRGDSNAAFAFFSRMTAEGF-------- 245
+ P+ F + + A+ G + F S G
Sbjct: 125 IFPDNFVVPNVCKACGALQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDAR 184
Query: 246 -----VPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
+P+ +V WNA++ G+ Q+ EA++L M G++P VTV+ L A G
Sbjct: 185 KVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMG 244
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++ G++ HAL GL +D G+++++ Y K G ++ A +F+ K+V +WN +I
Sbjct: 245 GVEEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFDRMVGKDVVTWNLLIS 304
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
Y + G+V+ +I + + M E ++ + VTL +++S + + G E+ + Y ++
Sbjct: 305 GYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEV-----QCYCIR 359
Query: 419 ISKEH----YACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
S E + VDM + G +V+A +D Q + + N++ A+
Sbjct: 360 HSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAY 407
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 277/527 (52%), Gaps = 47/527 (8%)
Query: 11 LSV-NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
LSV N L L KC +A R ++V + D + + +VG Y GDV +AR V
Sbjct: 194 LSVCNALVALYMKCESPEATRDARKVLDEMPNKD--DLTWTTMVVG-YVRRGDVGAARSV 250
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
F+++ + N M+ +G EA F M ++FTF+ VL AC +
Sbjct: 251 FEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLF 310
Query: 130 KKGKQVHA--VATQMGF--ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
GK VH + Q F E + V NAL+ YSKCG + ARR+F M +DVVSW ++
Sbjct: 311 AHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTI 370
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
+SGY S +D+AV +FE M +
Sbjct: 371 LSGYVESSCLDKAVEVFEEMPYK------------------------------------- 393
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
+ ++W M+SG+ +ALKLF M +KP + T G + A G G+++ G++
Sbjct: 394 --NELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQ 451
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+H + ++G G+ALI MY++CG++K+A +F + + SWNAMI G+HG
Sbjct: 452 LHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGH 511
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
++ELF+RM+ EG+ + ++ ++VL+AC+H GLV++G F SMK +G+ ++HY
Sbjct: 512 GREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYT 571
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
++D+L R+GR+ EA DL++ +P T S+ A +GC G +L ++ F+M +
Sbjct: 572 RLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQ 631
Query: 486 KPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+++LSN +A G W +A +RK+M+++ V+K+PG S +E N+
Sbjct: 632 HDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNK 678
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 258/498 (51%), Gaps = 40/498 (8%)
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
D NVF N ++ G +E ++ MR +KFTF +KAC+ +L+IK
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK 156
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
K +H + + G E DV +G+AL++ Y K GL+ A+ F + RDVV W +M++GY
Sbjct: 157 K---IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 213
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA---FAFFSRMTAEGFVP 247
+ + + + F RM E + P++FT ++ +A GD N F +M + V
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 248 ----------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
D+ +WN+++S Q + L+L ML +G
Sbjct: 274 VSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAG 333
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID------VFTGSALIDMYSKCG 333
I+P+ VTVT VL A ++ GREIH + GL D V +A+IDMY+KCG
Sbjct: 334 IQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCG 393
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
S++DA +FE K+VASWN MI YG HG + ++E+F RM E ++ +EVT + VLS
Sbjct: 394 SMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLS 453
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
ACSH G V +G MK +Y V + EHY CV+DML R+G++ EAY+L +P+
Sbjct: 454 ACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANP 513
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIM 513
+ A C +H LA + FE+ +V++SN+ A G + E +R M
Sbjct: 514 VVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTM 573
Query: 514 KEKNVQKQPGFSRVEKRN 531
+++NV+K PG S +E +N
Sbjct: 574 RQQNVRKTPGCSWIELKN 591
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 202/449 (44%), Gaps = 68/449 (15%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C + C+ + + K++H LL +L++F + S LV Y G + A++ F+++P
Sbjct: 144 CAIKACLD---VLEIKKIHGLLFKFGLELDVF-IGSALVNCYLKFGLMEHAQVAFEELPI 199
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V + N MV A G F+ + F M + ++FT + L + D+ G+ +
Sbjct: 200 RDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRII 259
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H A +MG+++ V+V N+LIDMY KC + A +F M E+D+ SW S++S +
Sbjct: 260 HGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDH 319
Query: 196 DEAVVLFERMKLEGLEPNQFTY-------------------------------------- 217
D + L +RM G++P+ T
Sbjct: 320 DGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDV 379
Query: 218 ---NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
NA+I YA+ G A F RM+ + D+ +WN MI G+ NEAL++F
Sbjct: 380 LLKNAVIDMYAKCGSMRDAHLVFERMSNK----DVASWNIMIMGYGMHGYGNEALEMFSR 435
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG----SALIDMYS 330
M +KP+ VT GVL A G + GR + +M DV + +IDM
Sbjct: 436 MCEVQLKPDEVTFVGVLSACSHAGFVSQGRN---FLVQMKSKYDVAPTIEHYTCVIDMLG 492
Query: 331 KCGSLKDARTLFEITRIK-NVASWNAMIGC--YGKHGMVD--SSIELFERMLEEGMRANE 385
+ G L +A L I+ N W A++ KH ++ ++ +FE LE +
Sbjct: 493 RAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFE--LEPEHCGSY 550
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKER 414
V + +V A G E+ LE+ +M+++
Sbjct: 551 VLMSNVYGAV---GRYEEVLEVRHTMRQQ 576
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 291/552 (52%), Gaps = 42/552 (7%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C++ C S+ L G++VHA++ D ++F+ + LV +Y+ GD++ A LVF K+P
Sbjct: 207 CVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANA-LVDMYSKLGDIHMAALVFGKVPK 265
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG--K 133
+V N + G+ Q A+ M+ N FT S +LKAC G +
Sbjct: 266 TDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGR 325
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H + ++D +G AL+DMY+K GLL AR+VF + +D++ W ++ISG +
Sbjct: 326 QIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGG 385
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR---GDSNAAFAFFSRMTAEGFVPD-- 248
E++ LF RM+ EG + N+ T A++ S A D+ A ++ GF+ D
Sbjct: 386 CHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKI---GFLSDSH 442
Query: 249 -----------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ + +MI+ +Q +A+KLF ML G
Sbjct: 443 VVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKG 502
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
++P+ ++ +L A + + G+++HA + + DVF G+AL+ Y+KCGS++DA
Sbjct: 503 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDAD 562
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
F K V SW+AMIG +HG ++++F RM++E + N +TL SVL AC+H G
Sbjct: 563 LAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAG 622
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LV++ F SMKE +G+ ++EHY+C++D+L R+G++ +A +L+ +P ++ GA
Sbjct: 623 LVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGAL 682
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+H +L E+ F + K V+L+N A+ G W E +RK+MK+ V+
Sbjct: 683 LAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVK 742
Query: 520 KQPGFSRVEKRN 531
K+P S VE ++
Sbjct: 743 KEPAMSWVELKD 754
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 210/426 (49%), Gaps = 66/426 (15%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL + +++L G +HA L + L + + ++ L+ Y+ C SAR VFD+ P+P
Sbjct: 10 LLTRYAATQSLFLGAHIHAHLLKSGL-LHAFRNHLLSFYSKCRLPGSARRVFDETPDP-- 66
Query: 79 FMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++W + +A++ N +EA+ F MR RCN+F IVLK D G QVH
Sbjct: 67 CHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAP---DAGLGVQVH 123
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF-HGMFERDVVSWTSMISGYCNVSKV 195
AVA G D+ V NAL+ MY G + ARRVF +R+ VSW M+S + +
Sbjct: 124 AVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRC 183
Query: 196 DEAVVLFERMKLEGLEPNQ-----------------------------------FTYNAI 220
+AV LF M G+ PN+ FT NA+
Sbjct: 184 SDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANAL 243
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVP--DLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+ Y++ GD + A F G VP D+V+WNA ISG + AL+L M S
Sbjct: 244 VDMYSKLGDIHMAALVF------GKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSS 297
Query: 279 GIKPNNVTVTGVLQ--AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
G+ PN T++ +L+ AG G+ +GR+IH + + D + G AL+DMY+K G L
Sbjct: 298 GLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLD 357
Query: 337 DARTLFEITRIKNVASWNAMI------GCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
DAR +FE K++ WNA+I GC+G+ S+ LF RM +EG N TL +
Sbjct: 358 DARKVFEWIPRKDLLLWNALISGCSHGGCHGE------SLSLFCRMRKEGSDINRTTLAA 411
Query: 391 VLSACS 396
VL + +
Sbjct: 412 VLKSTA 417
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 205/437 (46%), Gaps = 55/437 (12%)
Query: 22 KCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
KC L G QVHA+ + L +IF + + LV +Y G G V+ AR VFD+ +
Sbjct: 111 KCAPDAGL--GVQVHAVAVSTGLSGDIF-VANALVAMYGGFGFVDEARRVFDEAAR-DRN 166
Query: 80 MLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
++W M SAF N + +A+ F M R N+F FS V+ AC G D++ G++VHA
Sbjct: 167 AVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHA 226
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ + G++ DV NAL+DMYSK G + A VF + + DVVSW + ISG
Sbjct: 227 MVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQH 286
Query: 198 AVVLFERMKLEGLEPNQFTYNAII------------------------------------ 221
A+ L +MK GL PN FT ++I+
Sbjct: 287 ALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVAL 346
Query: 222 ----ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
A Y D+ F + R DL+ WNA+ISG + E+L LF M
Sbjct: 347 VDMYAKYGLLDDARKVFEWIPR-------KDLLLWNALISGCSHGGCHGESLSLFCRMRK 399
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G N T+ VL++ +I ++HAL ++G D + LID Y KC L+
Sbjct: 400 EGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRY 459
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A +FE N+ ++ +MI + + +I+LF ML +G+ + L S+L+AC+
Sbjct: 460 ANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACAS 519
Query: 398 GGLVEKGLEIFRSMKER 414
E+G ++ + +R
Sbjct: 520 LSAYEQGKQVHAHLIKR 536
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 14/221 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L LL C A QGKQVHA L ++F+ + LV YA CG + A L F +
Sbjct: 510 LSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFA-GNALVYTYAKCGSIEDADLAFSGL 568
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKK 131
P+ V + M+ A G+ + A+ F M + N T + VL AC GL+D K
Sbjct: 569 PDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAK 628
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYC 190
G ++ G + + +ID+ + G L A + + M FE + W ++++
Sbjct: 629 G-YFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAA-- 685
Query: 191 NVSKV--DEAVVLFERMKLEGLEPNQFTYNAIIA-SYARRG 228
S+V D + KL LEP + + ++A +YA G
Sbjct: 686 --SRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAG 724
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/516 (32%), Positives = 259/516 (50%), Gaps = 40/516 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
L+ Y G V SA +FD++ P+V N M+ G + F M +
Sbjct: 236 LIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVD 295
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
T VL AC + ++ G+ +H + F +V N L+DMYSKCG L A VF
Sbjct: 296 LTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFV 355
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------- 217
M + +VSWTS+I+ Y +A+ LF+ M+ +G+ P+ +T
Sbjct: 356 KMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDK 415
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
NA+I YA+ G A FS++ V D+V+WN MI
Sbjct: 416 GRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP----VKDIVSWNTMIG 471
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
G++Q+ NEAL+LF M KP+++T+ VL A ++ GREIH + R G
Sbjct: 472 GYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFS 530
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
D+ AL+DMY+KCG L A+ LF++ K++ SW MI YG HG + +I F M
Sbjct: 531 DLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMR 590
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
G+ +E + ++L+ACSH GL+ +G + F SM+ GV+ EHYACVVD+L R G +
Sbjct: 591 IAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNL 650
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
+AY + +P+ ++ G +GC IH LA + E FE+ +V+L+N+
Sbjct: 651 SKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVY 710
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
A +W E + LRK M+++ ++ PG S +E +F
Sbjct: 711 AEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKF 746
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 280/532 (52%), Gaps = 42/532 (7%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLV 69
L +N +L C + K+L GK+VH+++ +N +++ +L +KLV +Y CGD+ R +
Sbjct: 92 LGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKI 151
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
FDKI N VF+ N ++ A GNF+E++ F M++ N +TF+ VLK L +
Sbjct: 152 FDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKV 211
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
K+ K+VH ++GF ++ +V N+LI Y K G + SA +F + E DVVSW SMI+G
Sbjct: 212 KECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING- 270
Query: 190 CNVSKVD-EAVVLFERMKLEGLEPNQFTYNAIIASYARRGD------------------- 229
C V+ + +F +M + G+E + T +++ + A G+
Sbjct: 271 CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEE 330
Query: 230 ---SNAAFAFFSRM-----TAEGFV----PDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
SN +S+ E FV +V+W ++I+ + + ++A+ LF M
Sbjct: 331 VVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQS 390
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G++P+ TVT ++ A + S+ GR++H+ V + G+ ++ +ALI+MY+KCGS+++
Sbjct: 391 KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEE 450
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
AR +F +K++ SWN MIG Y ++ + + ++ELF M ++ + +++T+ VL AC+
Sbjct: 451 ARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAG 509
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYAC-VVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
++KG EI + R S H AC +VDM + G +V A L +P S
Sbjct: 510 LAALDKGREIHGHILRRG--YFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWT 567
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEA 506
G +HG + A++ E G+ +PD F + N C+ G +E
Sbjct: 568 -VMIAGYGMHGFGNEAISTFNEMRIAGI-EPDESSFSAILNACSHSGLLNEG 617
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 219/493 (44%), Gaps = 71/493 (14%)
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFT--------------------GNFQEAIGYFSLMRE 106
R +F K P + + + ++ +FT G+ + AI + +
Sbjct: 30 RFIFFKQPRRTCLLHSTVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKS 89
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
+ N ++ VL+ C ++ GK+VH+V G D ++G L+ MY CG L
Sbjct: 90 YELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQ 147
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------- 217
R++F + V W ++S Y + E+V LF++M+ G+ N +T+
Sbjct: 148 GRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAA 207
Query: 218 --------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
N++IA+Y + G +A F ++ PD+V+
Sbjct: 208 LGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE----PDVVS 263
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
WN+MI+G + L++F ML+ G++ + T+ VL A G++ +GR +H
Sbjct: 264 WNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGV 323
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
+ +V + L+DMYSKCG+L A +F + SW ++I Y + G+ +I
Sbjct: 324 KACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIG 383
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LF+ M +G+R + T+ S++ AC+ ++KG ++ S + G+ + +++M
Sbjct: 384 LFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV-HSYVIKNGMGSNLPVTNALINMY 442
Query: 432 CRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
+ G + EA + ++P + N+M G + + +L + M ++F KPD
Sbjct: 443 AKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQF------KPD 496
Query: 489 GFVMLSNICAADG 501
M + A G
Sbjct: 497 DITMACVLPACAG 509
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 158/276 (57%), Gaps = 11/276 (3%)
Query: 23 CMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C S +L +G+ VH+ + N + + + + L+ +YA CG V ARLVF KIP ++ +
Sbjct: 407 CACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDI--V 464
Query: 82 NWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
+W M ++ N EA+ F M++ ++ + T + VL AC GL + KG+++H
Sbjct: 465 SWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHI 523
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
+ G+ +D+ V AL+DMY+KCGLL A+ +F + ++D++SWT MI+GY +EA+
Sbjct: 524 LRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAI 583
Query: 200 VLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISG 258
F M++ G+EP++ +++AI+ + + G N + FF+ M E G P L + ++
Sbjct: 584 STFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDL 643
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
A+ ++A K + M IKP + T+ GVL +G
Sbjct: 644 LARMGNLSKAYKFIESM---PIKP-DTTIWGVLLSG 675
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/499 (32%), Positives = 274/499 (54%), Gaps = 13/499 (2%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMRE 106
L ++ + + ++ A L + ++ PNVF+ N M+ F ++Q +A+ + M
Sbjct: 16 LMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMI--KGFVQSYQPVQALELYVQMLR 73
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
+TF ++KAC + ++ + VH + GF++ V V +L+D YS G +
Sbjct: 74 ANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEE 133
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
+ RVF M ERDV +WT+M+SG V + A LF+ M + N T+N +I YAR
Sbjct: 134 SVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMP----DRNLATWNTLIDGYAR 189
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
+ + A F++M A D+++W MI+ ++Q+KR EAL +F M GI P+ VT
Sbjct: 190 LREVDVAELLFNQMPAR----DIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVT 245
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ V+ A G++ +G+EIH + + G ++DV+ GSALIDMY+KCGSL + +F R
Sbjct: 246 MATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLR 305
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
KN+ WN++I HG + ++ +F++M E ++ N VT +SVLSAC+H GL+E+G +
Sbjct: 306 EKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRK 365
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F SM + + EHY C+VD+L ++G + EA L+R + + + GA +GC +H
Sbjct: 366 RFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLH 425
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ-PGFS 525
++A + + + +L N+ A W EA +R MKE+ V+K+ PG S
Sbjct: 426 RNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCPGSS 485
Query: 526 RVEKRNEFVEKEVQNESKA 544
+E ++ + ++S A
Sbjct: 486 WIEMESQVHQFAASDKSHA 504
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 168/369 (45%), Gaps = 17/369 (4%)
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
++AV + D + N I S + A + M +V + +MI G+ +
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
+A+ L+ +M + P +T+ ++I + A A + GF + +
Sbjct: 61 PVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTS 120
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
++ ++ R E++++F M + V+G+++ G ++ + GR + R
Sbjct: 121 LVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSA---GRLFDMMPDR-- 175
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
++ T + LID Y++ + A LF +++ SW MI CY ++ ++ +F
Sbjct: 176 ---NLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFN 232
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
M + G+ +EVT+ +V+SAC+H G ++ G EI + + +G + + ++DM +
Sbjct: 233 EMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQ-HGFNLDVYIGSALIDMYAKC 291
Query: 435 G---RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
G R + + LR+ ++ NS+ G +HG + A+ M ++ E KP+G
Sbjct: 292 GSLDRSLLMFFKLREKNLFCWNSVI----EGLAVHGYAEEALAMFDK-MEREKIKPNGVT 346
Query: 492 MLSNICAAD 500
+S + A +
Sbjct: 347 FVSVLSACN 355
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 283/522 (54%), Gaps = 47/522 (9%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+ + L+ +Y+ V +AR++FD++P ++ N M+ +GN +EA+ + +R
Sbjct: 187 VAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM- 245
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ T +L AC D +G +H+ + + G E+++ V N LID+Y++ G L +
Sbjct: 246 ---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
+VF M+ RD++SW S+I Y + A+ LF+ M+L ++P+ T
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 218 -------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
NA++ YA+ G ++A A F+ + D+++W
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN----TDVISW 418
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
N +ISG+AQ+ +EA++++ M G I N T VL A G+++ G ++H +
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSI 370
+ GL++DVF ++L DMY KCG L+DA +LF +I R+ +V WN +I C+G HG + ++
Sbjct: 479 KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP-WNTLIACHGFHGHGEKAV 537
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
LF+ ML+EG++ + +T +++LSACSH GLV++G F M+ YG+ S +HY C+VDM
Sbjct: 538 MLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDM 597
Query: 431 LCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGF 490
R+G++ A ++ + + S+ GA + C +HG DL E FE+
Sbjct: 598 YGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYH 657
Query: 491 VMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
V+LSN+ A+ G+W + +R I K ++K PG+S +E N+
Sbjct: 658 VLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNK 699
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 160/525 (30%), Positives = 254/525 (48%), Gaps = 51/525 (9%)
Query: 29 LRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+ K +HA L+ + + + +KLV +Y G+V AR FD I N +V+ N M+
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 88 SAFTGNFQEAIGYFSL-MREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
GN E I FSL M + TF VLKAC ++D G ++H +A + GF
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMW 183
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
DV V +LI +YS+ + +AR +F M RD+ SW +MISGYC EA+ L ++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 207 L-------------------------------EGLEPNQFTYNAIIASYARRGDSNAAFA 235
GLE F N +I YA G
Sbjct: 244 AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F RM +V DL++WN++I + +++ A+ LF+ M +S I+P+ +T+ +
Sbjct: 304 VFDRM----YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 296 LTGSIQIGREIHALVCRMGLHI-DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
G I+ R + R G + D+ G+A++ MY+K G + AR +F +V SWN
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKGLEIF-RSMK 412
+I Y ++G +IE++ M EEG + AN+ T +SVL ACS G + +G+++ R +K
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN-IHGRRDL 471
G+ + + DM + GR+ +A L Q+P NS+ C+ HG +
Sbjct: 480 N--GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR--VNSVPWNTLIACHGFHGHGEK 535
Query: 472 AVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMK 514
AV + +E + G+ KPD FV L + C+ G E + ++M+
Sbjct: 536 AVMLFKEMLDEGV-KPDHITFVTLLSACSHSGLVDEGQWCFEMMQ 579
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 139/301 (46%), Gaps = 33/301 (10%)
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+++ K +HA +V + L+++Y G + AR F + RDV +W MIS
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 188 GYCNVSKVDEAVVLFERMKL-EGLEPNQFTYNAIIASYARRGDSNA------AFAF---- 236
GY E + F L GL P+ T+ +++ + D N F F
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDV 185
Query: 237 ---------FSRMTAEG---------FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+SR A G V D+ +WNAMISG+ QS EAL L G+
Sbjct: 186 YVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM 245
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
++VTV +L A G G IH+ + GL ++F + LID+Y++ G L+D
Sbjct: 246 ----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDC 301
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+ +F+ ++++ SWN++I Y + +I LF+ M ++ + +TLIS+ S S
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 399 G 399
G
Sbjct: 362 G 362
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 14/218 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C ++ ALRQG ++H L N L ++F + S L +Y CG + A +F +IP
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTS-LADMYGKCGRLEDALSLFYQIPRV 515
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV--GLLDIKKGKQ 134
N N ++ F G+ ++A+ F M + + + TF +L AC GL+D +G+
Sbjct: 516 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD--EGQW 573
Query: 135 -VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+ T G + ++DMY + G L +A + M + D W +++S C V
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA-CRV 632
Query: 193 -SKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-YARRG 228
VD + E L +EP Y+ ++++ YA G
Sbjct: 633 HGNVDLGKIASEH--LFEVEPEHVGYHVLLSNMYASAG 668
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/568 (30%), Positives = 277/568 (48%), Gaps = 75/568 (13%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAG 59
+ R + P N + L + C AL+ +QVH + + + S ++S LV +Y
Sbjct: 106 LTRGLMPDNRV----LPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIK 161
Query: 60 CGDVNSARLVFDKIPNPNVF---------------------------------MLNWMVM 86
C + A VFD++ P+V +++W M
Sbjct: 162 CNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGM 221
Query: 87 ASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ F +G + EA+ F M + + T S VL A L D+ G +H + G
Sbjct: 222 IAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGL 281
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+D V +ALIDMY KC +VF M DV G CN
Sbjct: 282 VSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDV--------GSCN------------- 320
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
A I +R G ++ F ++ +G ++V+W +MI+ +Q+ R
Sbjct: 321 --------------AFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGR 366
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+ EAL+LF+ M ++G+KPN+VT+ +L A G ++ G+ H R G+ DV+ GSA
Sbjct: 367 DIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSA 426
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
LIDMY+KCG ++ +R F+ KN+ WNA+I Y HG ++E+F+ M G + +
Sbjct: 427 LIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPD 486
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
++ VLSACS GL E+G F SM +YG++ EHYAC+V +L R+G++ +AY ++
Sbjct: 487 IISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMI 546
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
R++P+ + GA + C +H L E+ FE+ P +++LSNI A+ G W+
Sbjct: 547 RRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWN 606
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRNE 532
E +R +MK K ++K PG S +E +N+
Sbjct: 607 EVNRVRDMMKNKGLRKNPGCSWIEVKNK 634
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 194/404 (48%), Gaps = 37/404 (9%)
Query: 26 SKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
+ +L Q +Q HA +L T N L +KL+ YA A LV D +P PNVF + +
Sbjct: 26 TASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTL 85
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ A + F A+ FS M + +KAC GL +K +QVH +A+ GF
Sbjct: 86 IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGF 145
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
++D V ++L+ MY KC + A RVF MFE DVVSW+++++ Y VDEA LF
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSE 205
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M G++PN ++N +IA + G + A F M GF PD
Sbjct: 206 MGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPD---------------- 249
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
T++ VL A G + +G IH V + GL D SA
Sbjct: 250 -------------------GTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSA 290
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
LIDMY KC + +F+ +V S NA I ++G V+SS+ LF ++ ++GM N
Sbjct: 291 LIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELN 350
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
V+ S+++ CS G + LE+FR M + GVK + C++
Sbjct: 351 VVSWTSMIACCSQNGRDIEALELFREM-QIAGVKPNSVTIPCLL 393
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 276/554 (49%), Gaps = 44/554 (7%)
Query: 27 KALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+++ G+Q+H + + S+ + LV Y V+SAR VFD++ +V N ++
Sbjct: 209 RSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSII 268
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
G ++ + F M + T V C I G+ VH + F
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFS 328
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+ N L+DMYSKCG L SA+ VF M R VVS+TSMI+GY EAV LFE M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 206 KLEGLEPNQFTY-----------------------------------NAIIASYARRGDS 230
+ EG+ P+ +T NA++ YA+ G
Sbjct: 389 EEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSM 448
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTG 289
A FS M V D+++WN +I G++++ NEAL LF +LV P+ TV
Sbjct: 449 REAELVFSEMR----VKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVAC 504
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
VL A + GREIH + R G D ++L+DMY+KCG+L AR LF+ K+
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKD 564
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ SW MI YG HG +I LF +M + G+ +E++ +S+L ACSH GLV++G F
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFN 624
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
M+ ++ + EHYAC+VDML R+G + +AY + +P+ ++ GA GC IH
Sbjct: 625 IMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDV 684
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE- 528
LA + E+ FE+ +V+++NI A +W E + LRK + ++ ++K PG S +E
Sbjct: 685 KLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEI 744
Query: 529 --KRNEFVEKEVQN 540
+ N FV + N
Sbjct: 745 KGRVNIFVAGDSSN 758
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 160/539 (29%), Positives = 257/539 (47%), Gaps = 50/539 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C SK+L+ GK+V + N + S L SKL +Y CGD+ A VFD++
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEK 159
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
N ++ A +G+F +IG F M + +TFS V K+ L + G+Q+H
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHG 219
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ GF SVGN+L+ Y K + SAR+VF M ERDV+SW S+I+GY + ++
Sbjct: 220 YILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
+ +F +M G+E + T N ++
Sbjct: 280 GLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLD 339
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y++ GD ++A F M+ +V++ +MI+G+A+ EA+KLF+ M GI P
Sbjct: 340 MYSKCGDLDSAKVVFREMSGRS----VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ TVT VL + G+ +H + + D+F +AL+DMY+KCGS+++A +F
Sbjct: 396 DVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVF 455
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERML-EEGMRANEVTLISVLSACSHGGLV 401
R+K++ SWN +IG Y K+ + ++ LF +L E+ +E T+ VL AC+
Sbjct: 456 SEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAF 515
Query: 402 EKGLEIF-RSMKERYGVKISKEHYA-CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
+KG EI M+ Y S H A +VDM + G ++ A L + S
Sbjct: 516 DKGREIHGYIMRNGY---FSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWT-VM 571
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKEK 516
G +HG A+ + + + G+ +PD FV L C+ G E IM+ +
Sbjct: 572 IAGYGMHGFGKEAIALFNQMRQAGI-EPDEISFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 187/414 (45%), Gaps = 51/414 (12%)
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
+GN + A+ + + + + T VL+ C +K GK+V GF D ++
Sbjct: 74 SGNLKNAVKLLHVSGK--WDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNL 131
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
G+ L MY+ CG L A RVF + + W +++ ++ LF++M G+
Sbjct: 132 GSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGV 191
Query: 211 EPNQFTY-----------------------------------NAIIASYARRGDSNAAFA 235
E + +T+ N+++A Y + ++A
Sbjct: 192 EMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARK 251
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F MT D+++WN++I+G+ + + L +F ML SGI+ + T+ V
Sbjct: 252 VFDEMTER----DVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCA 307
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
+ I +GR +H + + + L+DMYSKCG L A+ +F ++V S+ +
Sbjct: 308 DSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTS 367
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER- 414
MI Y + G+ +++LFE M EEG+ + T+ +VL+ C+ L+++G + +KE
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKEND 427
Query: 415 --YGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGC 463
+ + +S ++DM + G M EA + +R + N++ G + C
Sbjct: 428 MGFDIFVSN----ALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNC 477
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 156/282 (55%), Gaps = 13/282 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C +++ L +GK+VH + ND+ +IF + + L+ +YA CG + A LVF ++
Sbjct: 403 VLNCCARNRLLDEGKRVHEWIKENDMGFDIF-VSNALMDMYAKCGSMREAELVFSEMRVK 461
Query: 77 NVFMLNWMVMASAFTGN--FQEAIGYFSLMR-EFIYRCNKFTFSIVLKACVGLLDIKKGK 133
++ ++W + ++ N EA+ F+L+ E + ++ T + VL AC L KG+
Sbjct: 462 DI--ISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
++H + G+ +D V N+L+DMY+KCG L AR +F + +D+VSWT MI+GY
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHG 579
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTW 252
EA+ LF +M+ G+EP++ ++ +++ + + G + + FF+ M E + P + +
Sbjct: 580 FGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 639
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
++ A++ ++A + + M + P + T+ G L G
Sbjct: 640 ACIVDMLARTGNLSKAYRFIENMPI----PPDATIWGALLCG 677
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDKIP 74
C+L C A +G+++H + N FS + + LV +YA CG + ARL+FD I
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRN--GYFSDRHVANSLVDMYAKCGALLLARLLFDDIT 561
Query: 75 NPNVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIK 130
+ + +++W VM + + G +EAI F+ MR+ ++ +F +L AC GL+D +
Sbjct: 562 SKD--LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVD-E 618
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGY 189
+ + + + E V ++DM ++ G L A R M D W +++ G
Sbjct: 619 GWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCG- 677
Query: 190 CNVSKVDEAVVLFERM--KLEGLEPNQFTYNAIIAS 223
++ V L ER+ K+ LEP Y ++A+
Sbjct: 678 ---CRIHHDVKLAERVAEKVFELEPENTGYYVLMAN 710
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/508 (33%), Positives = 267/508 (52%), Gaps = 49/508 (9%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
A VFDK+P N+ M+ A G ++AI F M Y ++FT+S VL AC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC---GLLCSARRVFHGMFERDVVSW 182
L + GKQ+H+ ++G DV VG +L+DMY+KC G + +R+VF M E +V+SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 183 TSMISGYCNVSKVD-EAVVLFERMKLEGLEPNQFTY------------------------ 217
T++I+ Y + D EA+ LF +M + PN F++
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 218 -----------NAIIASYARRG---DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
N++I+ YAR G D+ AF F +LV++NA++ G+A++
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDIL-------FEKNLVSYNAIVDGYAKNL 236
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
+ EA LF + +GI + T +L G++ G +IH + + G + +
Sbjct: 237 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 296
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
ALI MYS+CG+++ A +F +NV SW +MI + KHG ++E+F +MLE G +
Sbjct: 297 ALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP 356
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
NE+T ++VLSACSH G++ +G + F SM + +G+ EHYAC+VD+L RSG +VEA +
Sbjct: 357 NEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEF 416
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ +P+ + C +HG +L E E P +++LSN+ A+ G+W
Sbjct: 417 INSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQW 476
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+ +RK MKE+N+ K+ G S +E N
Sbjct: 477 KDVVKIRKSMKERNLIKEAGCSWIEVEN 504
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 215/449 (47%), Gaps = 61/449 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGC---GDVNSARLVFDKIP 74
+L C + L GKQ+H+ + L + + LV +YA C G V+ +R VF+++P
Sbjct: 57 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 116
Query: 75 NPNVFMLNWMVMASAFTGNF-QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
NV ++ A A +G +EAI F M R N F+FS VLKAC L D G+
Sbjct: 117 EHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 176
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
QV++ A ++G + VGN+LI MY++ G + AR+ F +FE+++VS+ +++ GY
Sbjct: 177 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNL 236
Query: 194 KVDEAVVLFERMKLEGLEPNQFTY-----------------------------------N 218
K +EA +LF + G+ + FT+ N
Sbjct: 237 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 296
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+I+ Y+R G+ AAF F+ M ++++W +MI+GFA+ AL++F ML +
Sbjct: 297 ALISMYSRCGNIEAAFQVFNEMEDR----NVISWTSMITGFAKHGFATRALEMFHKMLET 352
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREI-------HALVCRMGLHIDVFTGSALIDMYSK 331
G KPN +T VL A G I G++ H +V RM + + ++D+ +
Sbjct: 353 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHY------ACMVDLLGR 406
Query: 332 CGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLI 389
G L +A + + + W ++G HG + E +LE E L+
Sbjct: 407 SGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILL 466
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVK 418
S L A + G + ++I +SMKER +K
Sbjct: 467 SNLHASA--GQWKDVVKIRKSMKERNLIK 493
>gi|347954476|gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiola incana]
Length = 784
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/516 (29%), Positives = 267/516 (51%), Gaps = 6/516 (1%)
Query: 23 CMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
C+ + A + +GKQ HA N L + + L + ++ Y G + A ++FD +
Sbjct: 257 CLSASANMGGIEEGKQSHAXXIVNGLXLDNILGTSILNFYCXVGLIEYAEMIFDGMIEKX 316
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
N ++ G +EAI LMR + + T S ++ A ++K GK++
Sbjct: 317 XVTWNLLISGYVQQGLVEEAIHMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQC 376
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ G E+D+ + + +DMY+KCG + +A++VF ++D++ W +++S Y + E
Sbjct: 377 YCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGE 436
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
A+ LF M+LE + PN T+N II S R G N A F +M + G P+L++W M++
Sbjct: 437 ALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMN 496
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR-MGLH 316
G Q+ EA+ + M SG++PN T+T L A S+ GR IH + R
Sbjct: 497 GLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYS 556
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+ ++L+DMY+KCG + A +F + +NAMI Y +G V +I L+ +
Sbjct: 557 FSAWIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSL 616
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
+ G++ + +T+ S+LSAC++G V + +E+F M ++G+K EHY +VD+L +G
Sbjct: 617 EDGGVKPDNITITSLLSACNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLASAGE 676
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
+A L+ ++P M + C+ + +L + + E +VM+SN
Sbjct: 677 TDKALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMISNA 736
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
A +G W E +R++MK K ++K+PG S ++ + E
Sbjct: 737 YAVEGSWDEVAKMREMMKVKGLKKKPGCSWIQIKGE 772
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 228/464 (49%), Gaps = 37/464 (7%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C+ + L G+Q+HA +L D + +++KLV YA C + A+++F K+
Sbjct: 53 ILQGCVYERDLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRV 112
Query: 76 PNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NVF ++ G + A+ G+ ++ I+ N F V KAC L + G+
Sbjct: 113 RNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDN-FVVPNVCKACGALQWSRFGRG 171
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + G + V V ++L DMY KCG+L AR+VF + +R+ V+W +++ GY
Sbjct: 172 VHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGM 231
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG------DSNA---------------- 232
+EA+ L M+ EG+EP + T + +++ A G S+A
Sbjct: 232 NEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAXXIVNGLXLDNILGTS 291
Query: 233 --------AFAFFSRMTAEGFVPD-LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
++ M +G + VTWN +ISG+ Q EA+ + + M +K +
Sbjct: 292 ILNFYCXVGLIEYAEMIFDGMIEKXXVTWNLLISGYVQQGLVEEAIHMCQLMRRENLKFD 351
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
VT++ ++ A T ++++G+EI R GL D+ S +DMY+KCGS+ +A+ +F+
Sbjct: 352 CVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFD 411
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
T K++ WN ++ Y G+ ++ LF M E + N +T ++ + G V +
Sbjct: 412 STVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNE 471
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
E+F M+ G+ + + +++ L ++G EA LR++
Sbjct: 472 AKEMFLQMQSS-GIFPNLISWTTMMNGLVQNGCSEEAILFLRKM 514
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 190/409 (46%), Gaps = 43/409 (10%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSI---VLKACVGLLDIKKGKQVHAVATQMG--FEN 146
G +EA+ SL+ E YR + I +L+ CV D+ G+Q+HA + G +
Sbjct: 26 GEIREAL---SLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYAR 82
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
+ + L+ Y+KC L A+ +F + R+V SW ++I C + + A++ F M
Sbjct: 83 NEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEML 142
Query: 207 LEGLEPNQFTYNAIIAS----------------YARRGDSNAAFAFFSRMTAEG------ 244
G+ P+ F + + A+ G + F S G
Sbjct: 143 ENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLD 202
Query: 245 -------FVPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
++PD V WNA++ G+ Q+ EA++L M GI+P VTV+ L A
Sbjct: 203 DARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASA 262
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
G I+ G++ HA GL +D G+++++ Y G ++ A +F+ K +WN
Sbjct: 263 NMGGIEEGKQSHAXXIVNGLXLDNILGTSILNFYCXVGLIEYAEMIFDGMIEKXXVTWNL 322
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
+I Y + G+V+ +I + + M E ++ + VTL +++SA + ++ G EI + R+
Sbjct: 323 LISGYVQQGLVEEAIHMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEI-QCYCIRH 381
Query: 416 GVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRN 461
G++ + VDM + G +V A +D Q + + N++ A+ +
Sbjct: 382 GLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYAD 430
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 17/188 (9%)
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
+P ++ +S ++ EAL L M I+ +LQ + G++
Sbjct: 9 IPLSTSYFHRVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQ 68
Query: 306 IHALVCRMG--LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
IHA + + G + + + L+ Y+KC +L+ A+ LF R++NV SW A+IG +
Sbjct: 69 IHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRI 128
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE----IF 408
G+ + ++ F MLE G+ + + +V AC HG + + GL +
Sbjct: 129 GLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVA 188
Query: 409 RSMKERYG 416
S+ + YG
Sbjct: 189 SSLADMYG 196
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/539 (31%), Positives = 276/539 (51%), Gaps = 46/539 (8%)
Query: 32 GKQVHA----LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
G+Q HA + C D+ + S L+ +Y G + AR VFD++P N M+
Sbjct: 130 GQQAHAVAIKMACFYDVFV---GSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISG 186
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
A EA F LMR N+F F+ VL A + GKQ+H +A + G
Sbjct: 187 YAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVF 246
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
+S+ NAL+ MY+KCG L + +VF +++ ++W++MI+GY +A+ LF RM
Sbjct: 247 LSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHF 306
Query: 208 EGLEPNQFTY-----------------------------------NAIIASYARRGDSNA 232
G+ P++FT A++ YA+ G +
Sbjct: 307 AGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTED 366
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
A F+ + PDLV W +MI+G+ Q+ +AL L+ M + GI PN +T+ VL+
Sbjct: 367 ARKGFNYLQQ----PDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLK 422
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A + GR+IHA + GL ++V GSAL MY+KCG+L++ +F +++ S
Sbjct: 423 ACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIIS 482
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
WNAMI ++G ++ELFE M ++ + ++VT ++VLSACSH GLV+ G FR M
Sbjct: 483 WNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMF 542
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLA 472
+ +G+ EHYAC+VD+L R+G++ EA + + + + C + +L
Sbjct: 543 DEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELG 602
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
GE+ E+G ++ +V+LS I A G + E +R +MK + V K+PG S +E ++
Sbjct: 603 AYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKS 661
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 161/523 (30%), Positives = 264/523 (50%), Gaps = 62/523 (11%)
Query: 27 KALRQGKQVHALLC--TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
K+L++G+ +HA + + + L + L+ YA C + A+LVFD+I N +V N +
Sbjct: 21 KSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCL 80
Query: 85 VMASAFTGNFQEA--IGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
+ + G + + F MR N TFS + A L I G+Q HAVA +M
Sbjct: 81 INGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKM 140
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
DV VG++L++MY K GLL AR VF M ER+ V+W +MISGY EA +F
Sbjct: 141 ACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVF 200
Query: 203 ERMKLEGLEPNQFTY-----------------------------------NAIIASYARR 227
E M+ E + N+F + NA++ YA+
Sbjct: 201 ELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKC 260
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
G + + F + + +TW+AMI+G+AQS ++ALKLF M +GI P+ T+
Sbjct: 261 GSLDDSLQVFEMSNDK----NSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTL 316
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
GVL A +++ G+++H + ++G ++ +AL+DMY+K G +DAR F +
Sbjct: 317 VGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQ 376
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
++ W +MI Y ++G + ++ L+ RM EG+ NE+T+ SVL ACS+ ++G +I
Sbjct: 377 PDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQI 436
Query: 408 F-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSM-AGAFRNG 462
R++K YG+ + + + M + G + E + R++P + N+M +G +NG
Sbjct: 437 HARTIK--YGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNG 494
Query: 463 CNIHGRRDLAVTMGEEFFEMGLR--KPDG--FVMLSNICAADG 501
+G+ L E F EM + KPD FV + + C+ G
Sbjct: 495 ---YGKEAL-----ELFEEMRQQDTKPDDVTFVNVLSACSHMG 529
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 138/269 (51%), Gaps = 2/269 (0%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVH-ALLCTNDLNIFSLKSKLVGVYAGC 60
+R+ F N S L +L C + A+ +GKQVH LL + + + LV +YA
Sbjct: 302 SRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKS 361
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
G AR F+ + P++ + M+ G ++A+ + M+ N+ T + VL
Sbjct: 362 GVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVL 421
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
KAC L +G+Q+HA + G +V++G+AL MY+KCG L VF M ERD++
Sbjct: 422 KACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDII 481
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
SW +MISG EA+ LFE M+ + +P+ T+ ++++ + G ++ + +F M
Sbjct: 482 SWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMM 541
Query: 241 TAE-GFVPDLVTWNAMISGFAQSKRENEA 268
E G +P + + M+ +++ + EA
Sbjct: 542 FDEFGLLPKVEHYACMVDVLSRAGKLYEA 570
>gi|293333548|ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
gi|238005588|gb|ACR33829.1| unknown [Zea mays]
gi|413920755|gb|AFW60687.1| hypothetical protein ZEAMMB73_143396 [Zea mays]
Length = 569
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/504 (33%), Positives = 256/504 (50%), Gaps = 45/504 (8%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
AR VFD P + +M N ++ A + + + + + + MR + +T+ IVL AC
Sbjct: 71 ARRVFDATPVRDAYMWNTLLRAHSHSQLSHAADTLALYKRMRAAGVAPDHYTYPIVLPAC 130
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF---HGMFERDVV 180
++ G+ VH + D V +ALI MY + G + A VF HG R VV
Sbjct: 131 AAARELWLGRAVHGDVVRFALAGDGFVHSALITMYFQEGEVADAELVFAESHGS-SRTVV 189
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------- 217
SWTSM++GY EAV LF M EG+ PN+ T
Sbjct: 190 SWTSMVAGYVQNYYFGEAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFV 249
Query: 218 ------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
NA+IA Y + G A F M A L +WN M++ + Q
Sbjct: 250 IRLGFDANIPLANALIAMYGKCGSIPMAQTLFEGMPAR----SLASWNTMVAMYEQHADV 305
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EA+K F+ ML + + VT+ VL A +G++Q G+ +H L GL D G+ L
Sbjct: 306 VEAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALQTGKWVHELARNHGLDTDARIGNVL 365
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
+DMY+KCG + AR +F+ R+++V SW+AMI Y HG + +++LF M EG+R N
Sbjct: 366 VDMYAKCGEIASARNVFDCLRMRSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNS 425
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
T +VL AC H GLVE+GL+ F S+ Y + + EHYAC+VDML R+GR++EAY+++R
Sbjct: 426 FTFTAVLVACGHSGLVEEGLKHFNSILSDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIR 485
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
+ + + GAF GC +HG +LA + + F+ G +V++SN+ G +
Sbjct: 486 GMSLCPDKCVWGAFLAGCKLHGNLELAEFVARDLFQSGSNDVTFYVLMSNMYFEAGMLKD 545
Query: 506 AENLRKIMKEKNVQKQPGFSRVEK 529
AE +R MKE + K G S + +
Sbjct: 546 AERMRWAMKEMELNKTAGRSAINQ 569
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 196/425 (46%), Gaps = 45/425 (10%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+++T I + + ++ +HA A +G + + +L+ + L ARRVF
Sbjct: 17 HRYTRLITAASASSPVSLRALLPIHARAIVLGVSANPAFATSLLAGVAPASL-AYARRVF 75
Query: 172 HGMFERDVVSWTSMISGYCN--VSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------ 223
RD W +++ + + +S + + L++RM+ G+ P+ +TY ++ +
Sbjct: 76 DATPVRDAYMWNTLLRAHSHSQLSHAADTLALYKRMRAAGVAPDHYTYPIVLPACAAARE 135
Query: 224 -------------YARRGDSNAAFAFFSRMTAEGFVPD--------------LVTWNAMI 256
+A GD A + EG V D +V+W +M+
Sbjct: 136 LWLGRAVHGDVVRFALAGDGFVHSALITMYFQEGEVADAELVFAESHGSSRTVVSWTSMV 195
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+G+ Q+ EA+ LF M+ G+ PN +T+ L + G +H V R+G
Sbjct: 196 AGYVQNYYFGEAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRLGFD 255
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
++ +ALI MY KCGS+ A+TLFE +++ASWN M+ Y +H V +I+ F RM
Sbjct: 256 ANIPLANALIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVEAIKFFRRM 315
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
L E + + VTL+SVLSAC+ G ++ G + + +G+ +VDM + G
Sbjct: 316 LTEKVGFDCVTLVSVLSACARSGALQTG-KWVHELARNHGLDTDARIGNVLVDMYAKCGE 374
Query: 437 MVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+ A +D LR + ++M A+ N HG + A+ + G+R P+ F
Sbjct: 375 IASARNVFDCLRMRSVVSWSAMISAYAN----HGASEEALKLFSLMKNEGVR-PNSFTFT 429
Query: 494 SNICA 498
+ + A
Sbjct: 430 AVLVA 434
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 165/340 (48%), Gaps = 12/340 (3%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGD 62
+ P +++L CL G+ + L G+ VH + D NI L + L+ +Y CG
Sbjct: 219 VLPNEITLISFLPCLQGQ----EWLDAGEMVHGFVIRLGFDANI-PLANALIAMYGKCGS 273
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
+ A+ +F+ +P ++ N MV + EAI +F M + T VL A
Sbjct: 274 IPMAQTLFEGMPARSLASWNTMVAMYEQHADVVEAIKFFRRMLTEKVGFDCVTLVSVLSA 333
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C ++ GK VH +A G + D +GN L+DMY+KCG + SAR VF + R VVSW
Sbjct: 334 CARSGALQTGKWVHELARNHGLDTDARIGNVLVDMYAKCGEIASARNVFDCLRMRSVVSW 393
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA 242
++MIS Y N +EA+ LF MK EG+ PN FT+ A++ + G F+ + +
Sbjct: 394 SAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFTAVLVACGHSGLVEEGLKHFNSILS 453
Query: 243 E-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
+ P L + M+ ++ R EA ++ +GM + P+ L L G+++
Sbjct: 454 DYQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGM---SLCPDKCVWGAFLAGCKLHGNLE 510
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+ + + + G + DV + +MY + G LKDA +
Sbjct: 511 LAEFVARDLFQSGSN-DVTFYVLMSNMYFEAGMLKDAERM 549
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 200/446 (44%), Gaps = 67/446 (15%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSL------KSKLVGVYAGCGDVNSARLVFDK 72
+L C ++ L G+ VH D+ F+L S L+ +Y G+V A LVF +
Sbjct: 126 VLPACAAARELWLGRAVH-----GDVVRFALAGDGFVHSALITMYFQEGEVADAELVFAE 180
Query: 73 IPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ +++W M + + N F EA+ F M N+ T L G +
Sbjct: 181 SHGSSRTVVSWTSMVAGYVQNYYFGEAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLD 240
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
G+ VH ++GF+ ++ + NALI MY KCG + A+ +F GM R + SW +M++ Y
Sbjct: 241 AGEMVHGFVIRLGFDANIPLANALIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAMYE 300
Query: 191 NVSKVDEAVVLFERMKLE-----------------------------------GLEPNQF 215
+ V EA+ F RM E GL+ +
Sbjct: 301 QHADVVEAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALQTGKWVHELARNHGLDTDAR 360
Query: 216 TYNAIIASYARRGDSNAAFAFFS--RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
N ++ YA+ G+ +A F RM + +V+W+AMIS +A EALKLF
Sbjct: 361 IGNVLVDMYAKCGEIASARNVFDCLRMRS------VVSWSAMISAYANHGASEEALKLFS 414
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKC 332
M G++PN+ T T VL A G +G ++ G + ++++ + + + ++DM +
Sbjct: 415 LMKNEGVRPNSFTFTAVLVACGHSGLVEEGLKHFNSILSDYQMSPTLEHYACMVDMLGRA 474
Query: 333 GSLKDARTLFEITRIKNVAS----WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
G L +A +EI R ++ W A + HG ++ + + + + G +N+VT
Sbjct: 475 GRLIEA---YEIIRGMSLCPDKCVWGAFLAGCKLHGNLELAEFVARDLFQSG--SNDVTF 529
Query: 389 ISVLSACS-HGGLVEKGLEIFRSMKE 413
++S G+++ + +MKE
Sbjct: 530 YVLMSNMYFEAGMLKDAERMRWAMKE 555
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 173/559 (30%), Positives = 283/559 (50%), Gaps = 41/559 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL K LR +Q+HA L T+ L ++ + SK++ +A + + + N
Sbjct: 8 LLDSIKDCKNLRIFRQIHAQLVTSGL-VYDDFVTSKVMEFFANFVEYGDYACDYLEQGNT 66
Query: 77 NVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ + + + + G Q A+ + M + + FTF ++LKAC ++G+Q
Sbjct: 67 RLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQ 126
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH V ++G D V N+LI Y CG A +VF M RDVVSW S+ISG+
Sbjct: 127 VHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGH 186
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD------------------------- 229
DEA+ +F RM +E P+ T +++A+ AR GD
Sbjct: 187 FDEAISVFFRMDVE---PSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGNAM 243
Query: 230 -----SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
N F + E D+V+W MI+G QS ++L+LF M GI P+
Sbjct: 244 LDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDA 303
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
+ +T VL A G++ G +H + + G+ D+ G+A++DMY+KCG ++ A +F
Sbjct: 304 IILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYS 363
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+N +WNA++ HG+V ++ LFE M+ G++ NE+T +++L+AC H GLV++G
Sbjct: 364 MSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEG 423
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
+ F +M + Y + EHY C++D+ CR+G + EA +L R +PM + G N C
Sbjct: 424 RKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACT 483
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
G +L+ + + E+ FV+LSNI A + W LR++MK++ V+K PG
Sbjct: 484 TVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGS 543
Query: 525 SRVE---KRNEFVEKEVQN 540
S +E K +EFV ++ +
Sbjct: 544 SVIEVDGKAHEFVVGDISH 562
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 152/305 (49%), Gaps = 8/305 (2%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
S+ L +L C ++ L GK +H ++ L + ++ +Y G A+ +FD
Sbjct: 202 SMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGNAMLDMYVKNGCFYEAKNIFD 261
Query: 72 KIPNPNVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
++P ++ ++W +M + + + ++++ FS+MR + + VL AC L +
Sbjct: 262 ELPTRDI--VSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTL 319
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
G VH Q G + D+ +G A++DMY+KCG + A ++F+ M +R+ +W +++ G
Sbjct: 320 DFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGL 379
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA-EGFVPD 248
V EA+ LFE M + G++PN+ T+ AI+ + G + +F M+ +P
Sbjct: 380 AMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPK 439
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
L + MI F ++ EA++L + M +KP+ + +L A G+I++ I
Sbjct: 440 LEHYGCMIDLFCRAGLLEEAVELARTM---PMKPDVLIWGLLLNACTTVGNIELSHRIQD 496
Query: 309 LVCRM 313
+ +
Sbjct: 497 YILEL 501
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 166/516 (32%), Positives = 277/516 (53%), Gaps = 48/516 (9%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIY--- 109
+V +Y+ CG +N A++ F K N NV N M+ A + G+ EA F+L++E
Sbjct: 289 MVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEA---FNLLQEMQIQGE 345
Query: 110 --RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
+ N+ T VL AC+ L ++ K++H + + F++ V + NA I Y+KCG L SA
Sbjct: 346 EMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALNSA 404
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII------ 221
+VFHG+ ++ V SW ++I G+ +A+ L +M G +P+ FT ++++
Sbjct: 405 EKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHL 464
Query: 222 -----------------------------ASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
+ Y G +++A F RM + +LV+W
Sbjct: 465 KSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDK----NLVSW 520
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
NAMISG++Q+ E+L LF+ L GI+ + + + V A ++++G+E H V +
Sbjct: 521 NAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLK 580
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
D F G ++IDMY+K G +K++R +F+ + KNVASWNA+I +G HG +IEL
Sbjct: 581 ALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIEL 640
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
+ERM + G + T I +L AC H GLVE+GL+ F+ M+ ++ EHYAC++DML
Sbjct: 641 YERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLA 700
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
R+GR+ +A L+ ++P N + + C G ++ + ++ E+ K + +V+
Sbjct: 701 RAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVL 760
Query: 493 LSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
LSN+ A G+W +R++MKE +QK G S +E
Sbjct: 761 LSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIE 796
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 134/429 (31%), Positives = 215/429 (50%), Gaps = 44/429 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLC--TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C K + G+++H + T+ N + L ++L+ +YA CG +RLVFD +
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108
Query: 77 NVFMLNWMVMASAFTGN--FQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
N ++ W + S +T N + + + F L+ + ++ + FTF V+KAC G+LD++ G+
Sbjct: 109 N--LIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGE 166
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC-NV 192
+H + +MG DV VGNAL+ MY KCG + A +VF M E ++VSW SMI + N
Sbjct: 167 VIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENG 226
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------S 230
D +L E + EGL P+ T I+ A G+ +
Sbjct: 227 FSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVN 286
Query: 231 NAAFAFFSRM-----TAEGFV----PDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-- 279
NA +S+ FV ++V+WN MIS F+ NEA L + M + G
Sbjct: 287 NAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEE 346
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL-HIDVFTGSALIDMYSKCGSLKDA 338
+K N VT+ VL A ++ +E+H R H+++ +A I Y+KCG+L A
Sbjct: 347 MKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVEL--SNAFILAYAKCGALNSA 404
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+F K V+SWNA+IG + ++G ++ L +M G + + T+ S+L AC+H
Sbjct: 405 EKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHL 464
Query: 399 GLVEKGLEI 407
++ G EI
Sbjct: 465 KSLQYGKEI 473
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 171/352 (48%), Gaps = 55/352 (15%)
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHA-VATQMGFENDVSVGNALIDMYSKCGLLC 165
FI K ++L+AC DI+ G+++H V+ + ND + LI MY+ CG
Sbjct: 37 FISLQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPL 96
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF-ERMKLEGLEPNQFTY------- 217
+R VF M ++++ W +++SGY + V +F + + +P+ FT+
Sbjct: 97 DSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKAC 156
Query: 218 ----------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPD- 248
NA++ Y + G + A F F+P+
Sbjct: 157 GGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFD------FMPET 210
Query: 249 -LVTWNAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
LV+WN+MI F+++ ++ L ML G+ P+ VTV +L G + IG I
Sbjct: 211 NLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGI 270
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H L ++GL +V +A++ MYSKCG L +A+ F KNV SWN MI + G V
Sbjct: 271 HGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDV 330
Query: 367 DSSIELFERMLEEG--MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
+ + L + M +G M+ANEVT+++VL AC ++K L++ RS+KE +G
Sbjct: 331 NEAFNLLQEMQIQGEEMKANEVTILNVLPAC-----LDK-LQL-RSLKELHG 375
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 181/410 (44%), Gaps = 34/410 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
+L C+ LR K++H + L + + YA CG +NSA VF I + V
Sbjct: 357 VLPACLDKLQLRSLKELHGYSFRHCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTV 416
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
N ++ A G+ ++A+ M + + FT S +L AC L ++ GK++H
Sbjct: 417 SSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGY 476
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ G E D VG +L+ Y CG SAR +F M ++++VSW +MISGY E+
Sbjct: 477 VLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYES 536
Query: 199 VVLFERMKLEGLEPNQFTYNAIIA-----SYARRGDSNAAFAFFSRMTAEGFV------- 246
+ LF + EG++ ++ ++ S R G + + T + FV
Sbjct: 537 LALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDM 596
Query: 247 -------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
++ +WNA+I EA++L++ M G P+ T
Sbjct: 597 YAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTY 656
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGL-HIDVFTGSALIDMYSKCGSLKDA-RTLFEIT 345
G+L A G G ++ G + + L + + LIDM ++ G L DA R + E+
Sbjct: 657 IGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMP 716
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSA 394
+ W++++ G ++ ++ +++LE E +A L+S L A
Sbjct: 717 EEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYA 766
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 146/293 (49%), Gaps = 5/293 (1%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
+ LL C K+L+ GK++H + N L F + + L+ Y CG +SAR++FD++
Sbjct: 454 ISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMK 513
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ N+ N M+ + G E++ F + ++ V AC L ++ GK+
Sbjct: 514 DKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKE 573
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H + D VG ++IDMY+K G + +R+VF G+ +++V SW ++I +
Sbjct: 574 AHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGH 633
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWN 253
EA+ L+ERMK G P++FTY I+ + G +F M + P L +
Sbjct: 634 GKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYA 693
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
+I A++ R ++AL+L M + +N + +L++ G+++IG ++
Sbjct: 694 CLIDMLARAGRLDDALRLVNEM---PEEADNRIWSSLLRSCRTFGALEIGEKV 743
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 180/559 (32%), Positives = 281/559 (50%), Gaps = 33/559 (5%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGC 60
+R+++ V C+L C L G++VHA + L + + + LV +YA C
Sbjct: 184 HRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKC 243
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
GDV +AR VFD + + N M+ + + F M E N T + V
Sbjct: 244 GDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVT 303
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
A L D+ K++HA+A + GF DV+ N+LI MYS G + A VF M RD +
Sbjct: 304 VASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAM 363
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
SWT+MISGY D+A+ ++ M++ + P+ T + +A+ A G +
Sbjct: 364 SWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELA 423
Query: 241 TAEGFV-------------------------------PDLVTWNAMISGFAQSKRENEAL 269
T++GF+ D+++W++MI+GF + + EAL
Sbjct: 424 TSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEAL 483
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
F+ ML + +KPN+VT L A TGS++ G+EIHA V R G+ + + +AL+D+Y
Sbjct: 484 YYFRHML-ADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLY 542
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
KCG A F K+V SWN M+ + HG D ++ F MLE G +EVT +
Sbjct: 543 VKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFV 602
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
++L CS G+V +G E+F SM E+Y + + +HYAC+VD+L R GR+ E Y+ + ++P+
Sbjct: 603 ALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPI 662
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENL 509
++ GA NGC IH +L + E+ V+LS++ A G W E +
Sbjct: 663 TPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKV 722
Query: 510 RKIMKEKNVQKQPGFSRVE 528
RK M+ K ++ G S VE
Sbjct: 723 RKTMRVKGLEHDYGCSWVE 741
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 232/497 (46%), Gaps = 53/497 (10%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
G+ A VF K+P +VF N MV G +EA+ + M R + +TF VL
Sbjct: 143 GETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVL 202
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
++C G+ D+ G++VHA + G +V V NAL+ MY+KCG + +AR+VF GM D +
Sbjct: 203 RSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCI 262
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------- 217
SW +MI+G+ + + + LF M + +EPN T
Sbjct: 263 SWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALA 322
Query: 218 ------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
N++I Y+ G A FSRM D ++W AMISG+ ++
Sbjct: 323 VKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETR----DAMSWTAMISGYEKNGFP 378
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
++AL+++ M V+ + P++VTV L A G + +G ++H L G + +AL
Sbjct: 379 DKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANAL 438
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
++MY+K ++ A +F+ K+V SW++MI + + ++ F ML + ++ N
Sbjct: 439 VEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD-VKPNS 497
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRMVEAYDL 443
VT I+ L+AC+ G + G EI + + I+ E Y ++D+ + G+ A+
Sbjct: 498 VTFIAALAACAATGSLRCGKEIHAHVLRQ---GIASEGYVPNALLDLYVKCGQTGYAW-- 552
Query: 444 LRQVPMYVTNSMAG--AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAA 499
Q + T + G HG D+A++ E E G PD FV L C+
Sbjct: 553 -AQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETG-EHPDEVTFVALLCGCSR 610
Query: 500 DGEWHEAENLRKIMKEK 516
G + L M EK
Sbjct: 611 AGMVSQGWELFHSMTEK 627
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 260/486 (53%), Gaps = 47/486 (9%)
Query: 52 KLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC 111
+L+ V + V+ A VF + NPNV++ M+ +G + + + M
Sbjct: 66 ELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLP 125
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+ + + VLKAC D+K +++HA ++GF + SVG ++++Y K G L +A+++F
Sbjct: 126 DNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMF 181
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M +RD V+ T MI+ Y + EA+ LF+ +K++
Sbjct: 182 DEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIK----------------------- 218
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
D V W AMI G ++K N+AL+LF+ M + + N T VL
Sbjct: 219 ----------------DTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVL 262
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A G++++GR +H+ V + + F G+ALI+MYS+CG + +AR +F + R K+V
Sbjct: 263 SACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVI 322
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
S+N MI HG +I F M+ G R N+VTL+++L+ACSHGGL++ GLE+F SM
Sbjct: 323 SYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM 382
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
K + V+ EHY C+VD+L R GR+ EAY + +P+ + M G + C IHG +L
Sbjct: 383 KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMEL 442
Query: 472 AVTMGEEFFEMGLRKPDG--FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEK 529
+ + FE PD +V+LSN+ A+ G+W E+ +R+ M++ ++K+PG S +E
Sbjct: 443 GEKIAKRLFES--ENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEV 500
Query: 530 RNEFVE 535
N+ E
Sbjct: 501 DNQIHE 506
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/479 (35%), Positives = 259/479 (54%), Gaps = 40/479 (8%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
L++ L+ Y G AR +FD++ + NV N M++ A GN + F MR
Sbjct: 165 LRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHG 224
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ FT +L C L + K GK VHA + +++ + NAL+DMY KC L AR
Sbjct: 225 LEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLAR 284
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
+VF G E+D VSW ++I+GY V +++ A LF ++ + ++N++I+ YA+ G
Sbjct: 285 KVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDI----VSWNSLISGYAQNG 340
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
D F+RM AE PD VT +IS A+
Sbjct: 341 DYVTVKCLFTRMFAENVKPDKVTIVNLISAVAE--------------------------- 373
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
G++ GR IH L +M I+ F+GSALIDMY KCGS++ A +F K
Sbjct: 374 --------MGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEK 425
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+V +W MI + HG + ++ELF M E + N+VT +SVL+ACSH GLV++GL+IF
Sbjct: 426 DVTTWTTMITGFAFHGFGNKALELFSVMQAE-TKPNDVTFVSVLAACSHSGLVDEGLKIF 484
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
SMK+RY ++ EHY C+VD+LCRSGR+++A ++ ++PM + S+ GA + C +H
Sbjct: 485 SSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRN 544
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
+LA E ++ K G+++LSN+ A G W ++++R++M + V+K G S V
Sbjct: 545 MELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSV 603
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/550 (30%), Positives = 278/550 (50%), Gaps = 40/550 (7%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C L G Q+H + + L + S + + L+ +Y+ C + +AR +FD P
Sbjct: 164 CVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQS 223
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N ++ G EA F M + + TF+ L LL +K K++H
Sbjct: 224 DLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIH 283
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ DV + +ALID+Y KC + A+++ D V T+MISGY K
Sbjct: 284 GYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNK 343
Query: 197 EAVVLFERMKLEGLEPNQFTYN-----------------------------------AII 221
EA+ F + E ++P T++ AI+
Sbjct: 344 EALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAIL 403
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ G + A F+R+T + D + WN+MI+ +Q+ R EA+ LF+ M + G +
Sbjct: 404 DMYAKCGRLDLACRVFNRITEK----DAICWNSMITSCSQNGRPGEAINLFRQMGMEGTR 459
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+ V+++G L A ++ G+EIH L+ + L D++ S+LIDMY+KCG+L +R +
Sbjct: 460 YDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRV 519
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ + +N SWN++I YG HG + + LF ML G++ + VT + ++SAC H G V
Sbjct: 520 FDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQV 579
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
++G+ + M E YG+ EHYACV DM R+GR+ EA++ + +P + G
Sbjct: 580 DEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLG 639
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C+IHG +LA + F++ +V+L+N+ A G+W + +R IMKE+ V+K
Sbjct: 640 ACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKV 699
Query: 522 PGFSRVEKRN 531
PG+S +E N
Sbjct: 700 PGYSWIEVNN 709
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 149/542 (27%), Positives = 241/542 (44%), Gaps = 65/542 (11%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFSLK------SKLVGVYAGCGDVNSARLVFDKIPNP 76
C K+++ GK VH +N+ LK S L+ +YA G ++ A+ +FD IP
Sbjct: 68 CCGLKSVKMGKIVH-----ETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQK 122
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ + N M+ G+ AI F MR + N TF+ VL C + G Q+H
Sbjct: 123 DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLH 182
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+A G E D V N L+ MYSKC L +AR++F + D+VSW +ISGY +
Sbjct: 183 GIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMG 242
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
EA LF M G++P+ T+ +A+I
Sbjct: 243 EAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALI 302
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y + D A ++ + D V MISG+ + + EAL+ F+ ++ +K
Sbjct: 303 DIYFKCRDVEMA----QKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMK 358
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P +VT + + A ++ +G+E+H + + L GSA++DMY+KCG L A +
Sbjct: 359 PTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRV 418
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F K+ WN+MI ++G +I LF +M EG R + V++ LSAC++ +
Sbjct: 419 FNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPAL 478
Query: 402 EKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRM---VEAYDLLRQVPMYVTNSMA 456
G EI M + + + YA ++DM + G + +D +++ NS+
Sbjct: 479 HYGKEIHGLMIKG---PLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSII 535
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRKIMK 514
A+ N HG + + E G+ +PD L I C G+ E +M
Sbjct: 536 SAYGN----HGDLKECLALFHEMLRNGI-QPDHVTFLGIISACGHAGQVDEGIRYYHLMT 590
Query: 515 EK 516
E+
Sbjct: 591 EE 592
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 225/498 (45%), Gaps = 72/498 (14%)
Query: 56 VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFT 115
+Y G + A+ +F + NWM+ G F A+ ++ M +K+T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
F V+KAC GL +K GK VH MG + DV VG++LI +Y++ G L A+ +F +
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG------- 228
++D V W M++GY A+ +F M+ ++PN T+ +++ A
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 229 ------------DS---NAAFAFFS---------RMTAEGFVPDLVTWNAMISGFAQSKR 264
DS N A +S ++ DLV+WN +ISG+ Q+
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
EA LF+GM+ +GIKP+++T L S++ +EIH + R + +DVF SA
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
LID+Y KC ++ A+ + + + MI Y +G ++E F +++E M+
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360
Query: 385 EVTLISVLSACS-----------HGGLVEKGLE----IFRSMKERYGVKISKEHYACVV- 428
VT S+ A + HG +++ L+ + ++ + Y K + AC V
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYA-KCGRLDLACRVF 419
Query: 429 ------DMLC---------RSGRMVEAYDLLRQVPM----YVTNSMAGAFRNGCNIHGRR 469
D +C ++GR EA +L RQ+ M Y S++GA N+
Sbjct: 420 NRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLP--- 476
Query: 470 DLAVTMGEEFFEMGLRKP 487
A+ G+E + ++ P
Sbjct: 477 --ALHYGKEIHGLMIKGP 492
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 275/532 (51%), Gaps = 32/532 (6%)
Query: 29 LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+ K +HA L L+ + L +K++ G+ N + + D+ PN+F+ N M+
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG 82
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
FQE+I + MR+ + FTF VLKAC +LD + G ++H++ + G E D
Sbjct: 83 LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEAD 142
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V +LI++Y+KCG + +A +VF + +++ SWT+ ISGY V K EA+ +F R+
Sbjct: 143 AFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLE 202
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV--------------------- 246
GL P+ F+ ++++ R GD + +T G V
Sbjct: 203 MGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMER 262
Query: 247 ----------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
++V+W++MI G+A + EAL LF ML G+KP+ + GVL +
Sbjct: 263 ARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCAR 322
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
G++++G L+ + G+ALIDMY+KCG + A +F R K+ WNA
Sbjct: 323 LGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAA 382
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I G V ++ LF +M + G++ + T + +L AC+H GLVE+G F SM+ +
Sbjct: 383 ISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFT 442
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
+ EHY C+VD+L R+G + EA+ L++ +PM + GA GC +H L +
Sbjct: 443 LTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVL 502
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
++ + +V+LSNI AA +W EA +R IM E+ V+K PG+S +E
Sbjct: 503 KKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIE 554
>gi|51535410|dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596587|gb|EAZ36367.1| hypothetical protein OsJ_20695 [Oryza sativa Japonica Group]
gi|218197849|gb|EEC80276.1| hypothetical protein OsI_22264 [Oryza sativa Indica Group]
Length = 517
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 159/472 (33%), Positives = 252/472 (53%), Gaps = 10/472 (2%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIV 119
G + AR VFD IP P++FM N MV A G +A + M E R + FTF +
Sbjct: 47 GRMGYARKVFDGIPRPDLFMHNAMVRGYAHAGAPGDAFAVYRRMTEASRLRPDAFTFCYL 106
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
L+AC GL + G+QVH ++GF D V NALI+M++KCG L A + E DV
Sbjct: 107 LRACAGLPGSRAGRQVHGAVVKLGFLKDAYVRNALINMFAKCGDLRVASVLLDEAGEGDV 166
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
V+W+++I+G+ + A +F+ E + +N ++ +YA+ G+ A F R
Sbjct: 167 VAWSAVIAGHAARGDMAAARKMFD----ECTHKDIVCWNVMLGAYAKHGEMENARELFDR 222
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
+ D+V+WN +I+G+A AL++F M +G P+ T+ +L TG
Sbjct: 223 APEK----DVVSWNTIITGYAAQGMLKHALEVFDEMRAAGWTPDEATIVSLLSCCANTGL 278
Query: 300 IQIGREIH-ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
+ GR IH L I + G+AL+ MY+KCG L A F + +V +WN++IG
Sbjct: 279 LDAGRMIHHQLHLERRPWISIVVGNALVSMYAKCGDLHTAVEGFNTMKDTDVWTWNSVIG 338
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
HG + S+ F++MLE+ + NE++ + VL ACSH GLVE G + F MK+RYG++
Sbjct: 339 GLAFHGQAEQSVRFFKKMLEKRIHPNEISFLCVLGACSHAGLVEDGQKFFYLMKDRYGIE 398
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEE 478
+ HY+C+VDML R+G + EAY ++ + + + C HG L + E+
Sbjct: 399 PNARHYSCIVDMLGRAGLLDEAYAIVSNMRCEPSAVVWRTLLGACRTHGNMTLGKLVREK 458
Query: 479 FFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
M +V+LS I A+ GEW E R+ M + ++K G+++++++
Sbjct: 459 LLNMNEDASADYVLLSGIYASSGEWLGVETERRSMDRRGIRKAAGYAQIDRK 510
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 182/440 (41%), Gaps = 86/440 (19%)
Query: 19 LLGKCMKSKALRQGKQVH-ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C R G+QVH A++ L +++ L+ ++A CGD+ A ++ D+ +
Sbjct: 106 LLRACAGLPGSRAGRQVHGAVVKLGFLKDAYVRNALINMFAKCGDLRVASVLLDEAGEGD 165
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V + ++ A G+ A R+ C
Sbjct: 166 VVAWSAVIAGHAARGDMAAA-------RKMFDECT------------------------- 193
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
D+ N ++ Y+K G + +AR +F E+DVVSW ++I+GY +
Sbjct: 194 -------HKDIVCWNVMLGAYAKHGEMENARELFDRAPEKDVVSWNTIITGYAAQGMLKH 246
Query: 198 AVVLFERMKLEGLEPNQFTY------------------------------------NAII 221
A+ +F+ M+ G P++ T NA++
Sbjct: 247 ALEVFDEMRAAGWTPDEATIVSLLSCCANTGLLDAGRMIHHQLHLERRPWISIVVGNALV 306
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ YA+ GD + A F+ M D+ TWN++I G A + ++++ FK ML I
Sbjct: 307 SMYAKCGDLHTAVEGFNTMKDT----DVWTWNSVIGGLAFHGQAEQSVRFFKKMLEKRIH 362
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVC-RMGLHIDVFTGSALIDMYSKCGSLKDART 340
PN ++ VL A G ++ G++ L+ R G+ + S ++DM + G L +A
Sbjct: 363 PNEISFLCVLGACSHAGLVEDGQKFFYLMKDRYGIEPNARHYSCIVDMLGRAGLLDEAYA 422
Query: 341 LFEITRIKNVA-SWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN-EVTLISVLSACSHG 398
+ R + A W ++G HG + + E++L A+ + L+S + A S
Sbjct: 423 IVSNMRCEPSAVVWRTLLGACRTHGNMTLGKLVREKLLNMNEDASADYVLLSGIYASSGE 482
Query: 399 GLVEKGLEIFRSMKERYGVK 418
L G+E R +R G++
Sbjct: 483 WL---GVETERRSMDRRGIR 499
>gi|297819530|ref|XP_002877648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323486|gb|EFH53907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 786
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 253/467 (54%), Gaps = 24/467 (5%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
VFD+IP NV ++N M+ + G ++E I F M + + +TF VLKAC +
Sbjct: 1 VFDEIPERNVIIINVMIRSYVNNGFYREGIQVFVTMCSCHVKPDHYTFPCVLKACSCSGN 60
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
I GK++H AT++G + + VGN L+ MY KCG L AR V M RDVVSW S+++G
Sbjct: 61 IVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAG 120
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA--FFSRMTAEGFV 246
Y + D+A+ + M+ + + T +++ + + N + F +M +
Sbjct: 121 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKS-- 178
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
LV+WN MI + ++ EA++L+ GM G +P+ V++T VL A G T ++ +G++I
Sbjct: 179 --LVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKI 236
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H + R L ++ +ALIDMY+KCG L AR +FE + ++V SW AMI YG G
Sbjct: 237 HGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRG 296
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
++ LF +M + G+ + + ++ L+ACSH GL+E+G F+ M + Y + EH AC
Sbjct: 297 CDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLAC 356
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
+VD+L R+G+M EAY +++ T +LA + + + G
Sbjct: 357 MVDLLGRAGKMKEAYKFIQECQWNQTREFG-------------ELARCILTQTSQSGY-- 401
Query: 487 PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
+V+LSNI A G W E N+R IMK K ++K PG S VE E
Sbjct: 402 ---YVLLSNIYAKAGRWEEETNIRNIMKSKGLKKNPGASNVEVNREI 445
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 149/330 (45%), Gaps = 18/330 (5%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C S + GK++H L+ + + LV +Y CG ++ ARLV D++
Sbjct: 50 CVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 109
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V N +V A F +A+ M + T + +L A V + V
Sbjct: 110 DVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-VSNTTTENVMYVK 168
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM----FERDVVSWTSMISGYCNV 192
+ +MG ++ VS N +I +Y K + A ++ GM FE D VS TS++ +
Sbjct: 169 DMFFKMGKKSLVS-WNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDT 227
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
S + + ++ + L PN NA+I YA+ G + A F M + D+V+W
Sbjct: 228 SALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSR----DVVSW 283
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
AMIS + S R +A+ LF M SG+ P+++ L A G ++ GR L
Sbjct: 284 TAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL--- 340
Query: 313 MGLHIDVFTG----SALIDMYSKCGSLKDA 338
M H + + ++D+ + G +K+A
Sbjct: 341 MTDHYKITPRLEHLACMVDLLGRAGKMKEA 370
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 170/549 (30%), Positives = 287/549 (52%), Gaps = 71/549 (12%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ L+ +YA CG+V+SA V+DK+ + + N ++ A A G F +A F + R
Sbjct: 152 TSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTR 211
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N +T+S +L C + I++GKQ+HA +M + ++ +VGNAL+ +YSKCG++ A V
Sbjct: 212 PNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIV 271
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA----- 225
F + +R+++SWT+ I+G+ +A+ F M+ G+EPN+FT++ ++AS
Sbjct: 272 FENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGK 331
Query: 226 ---RRGDSN-------AAFAFFSRMTAEGFVP---------------------------- 247
+R SN + +M EG P
Sbjct: 332 WMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGEN 391
Query: 248 ------------DLVTWNAMISGFAQSKRENEALKLFKGM--------LVSGIK------ 281
D +A+I +++ +A ++F + L++G
Sbjct: 392 MHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIPNVVSWNTLIAGFSQMLDQG 451
Query: 282 --PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
P++VT++ +L A +++ G+EIH +G+ DV+ SAL+DMY+KCG + +A+
Sbjct: 452 FCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAK 511
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
LF + +N +WN++I Y HG + +IELF +M E + + +T +VL+ACSH G
Sbjct: 512 ILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAG 571
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
+VE G +FR M+E+Y ++ EHYAC+VD+L R+G++ EAYDL++ +P+ + GA
Sbjct: 572 MVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGAL 631
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C HG +LA E FE+ P ++LSN+ A G W A ++K+MK++
Sbjct: 632 LGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFG 691
Query: 520 KQPGFSRVE 528
K PG S +E
Sbjct: 692 KFPGCSWIE 700
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 145/291 (49%), Gaps = 20/291 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C R G+ +H ++ N + + S L+ +Y+ CG V A VFD IP
Sbjct: 373 LPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIP 432
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N +++W + I FS M + + + T S +L AC + +++ GK+
Sbjct: 433 N----VVSWNTL-----------IAGFSQMLDQGFCPSSVTISSLLPACTNVANLRHGKE 477
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H A +G E DV V +AL+DMY+KCG + A+ +F+ M ER+ V+W S+I GY N
Sbjct: 478 IHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGY 537
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWN 253
+EA+ LF +M+ + + T+ A++ + + G + F +M + + P L +
Sbjct: 538 CNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYA 597
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
M+ ++ + +EA L K M V +P+ +L A G+I++
Sbjct: 598 CMVDLLGRAGKLSEAYDLIKAMPV---EPDKFVWGALLGACRNHGNIELAE 645
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 113/206 (54%), Gaps = 12/206 (5%)
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
GL ++F ++I YA+ G+ ++A + +MT+ D T N +IS +A++ +A
Sbjct: 143 GLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSL----DAATCNCLISAYARNGFFVQA 198
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
++F + G +PN+ T + +L G +IQ G+++HA V +M + G+AL+ +
Sbjct: 199 FQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTL 258
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
YSKCG +++A +FE +N+ SW A I + +HG +++ F M E G+ NE T
Sbjct: 259 YSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTF 318
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKER 414
VL++C G ++ + MK+R
Sbjct: 319 SIVLASC--------GCDLGKWMKQR 336
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%)
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ V L G G +++GR H V ++GL D F ++LIDMY+KCG + A +
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
++ + A+ N +I Y ++G + ++F ++ G R N T ++L+ C +
Sbjct: 171 YDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAI 230
Query: 402 EKGLEI 407
++G ++
Sbjct: 231 QEGKQL 236
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 269/509 (52%), Gaps = 33/509 (6%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
LV Y G ++ A VFD++ +V N M+ EA+G F M +
Sbjct: 109 LVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGD 168
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
T S VL CV L D +H A + G + ++ V NALID+Y K G+L A+ VFH
Sbjct: 169 TVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFH 228
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
GM RD+V+W S+ISG + A+ +F+ M+ G+ P+ T ++ ++ A+ GD +
Sbjct: 229 GMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRS 288
Query: 233 AFAFFSRMTAEGF--------------------------------VPDLVTWNAMISGFA 260
A + + G+ V D V+WN +I+G+
Sbjct: 289 AKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYM 348
Query: 261 QSKRENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
Q+ NEA++ + M G+K T VL A G++Q G +HAL ++GL++DV
Sbjct: 349 QNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDV 408
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+ G+ LID+Y+KCG L +A LFE ++ WNA+I G HG ++ LF RM +E
Sbjct: 409 YVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQE 468
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G++ + VT +S+L+ACSH GLV++G F M+ Y + +HYAC+ DML R+G++ E
Sbjct: 469 GIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDE 528
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A++ ++ +P+ +++ GA C IHG ++ + FE+ +V++SN+ A
Sbjct: 529 AFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAK 588
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
G+W + +R +++ +N+QK PG+S +E
Sbjct: 589 VGKWDGVDEVRSLVRRQNLQKTPGWSSIE 617
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 222/459 (48%), Gaps = 55/459 (11%)
Query: 101 FSLMREFI-----YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF-ENDVSVGNAL 154
F L+R + +R + FTF +++A Q+HA A ++G V +L
Sbjct: 53 FPLLRHILSCAYPFRPDGFTFPSLIRAAP---SNASAAQLHACALRLGLVRPSVFTSGSL 109
Query: 155 IDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE------ 208
+ Y + G + A +VF M ERDV +W +M+SG C ++ EAV LF RM E
Sbjct: 110 VHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDT 169
Query: 209 -----------------------------GLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
GL+ F NA+I Y + G A F
Sbjct: 170 VTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHG 229
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
M DLVTWN++ISG Q + ALK+F+GM SG+ P+ +T+ + A G
Sbjct: 230 MECR----DLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGD 285
Query: 300 IQIGREIHALVCRMGLHI-DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
+ + +H V R G + D+ G+A++DMY+K +++ A+ +F+ +++ SWN +I
Sbjct: 286 GRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLIT 345
Query: 359 CYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
Y ++G+ + ++E + M + EG++A + T +SVL A SH G +++G+ + ++ + G+
Sbjct: 346 GYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRM-HALSIKIGL 404
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
+ C++D+ + G++ EA L ++P T A +G +HG A+T+
Sbjct: 405 NVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPW-NAIISGLGVHGHGAEALTLFS 463
Query: 478 EFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMK 514
+ G+ KPD FV L C+ G + + +M+
Sbjct: 464 RMQQEGI-KPDHVTFVSLLAACSHAGLVDQGRSFFDVMQ 501
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 28 ALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
AL+QG ++HAL LN+ + + L+ +YA CG + A L+F+K+P + N ++
Sbjct: 388 ALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIIS 447
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHAVATQMGF 144
G+ EA+ FS M++ + + TF +L AC GL+D +G+ V Q+ +
Sbjct: 448 GLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVD--QGRSFFDV-MQVTY 504
Query: 145 ENDVSVGN---ALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKVDEAVV 200
+ V + + DM + G L A M + D W +++ G C + E
Sbjct: 505 D-IVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALL-GACRIHGNVEMGK 562
Query: 201 LFERMKLEGLEPNQFTYNAIIAS-YARRG 228
+ + E L+P Y ++++ YA+ G
Sbjct: 563 VASQNLFE-LDPENVGYYVLMSNMYAKVG 590
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 247/447 (55%), Gaps = 32/447 (7%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
++ +LK C + +G+ VHA Q F +D+ +GN L++MY+KCG L AR+VF M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA--RRG----- 228
+RD V+WT++ISGY + +A++ F +M G PN+FT +++I + A RRG
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 229 ----------DSNAAF--AFFSRMTAEGFVPDL------------VTWNAMISGFAQSKR 264
DSN A T G + D V+WNA+I+G A+
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+AL+LF+GML G +P++ + + A TG ++ G+ +HA + + G + F G+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+DMY+K GS+ DAR +F+ ++V SWN+++ Y +HG ++ FE M G+R N
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
E++ +SVL+ACSH GL+++G + MK+ G+ HY VVD+L R+G + A +
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
++P+ T ++ A N C +H +L E FE+ P V+L NI A+ G W+
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRN 531
+A +RK MKE V+K+P S VE N
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEIEN 508
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 214/447 (47%), Gaps = 55/447 (12%)
Query: 15 YLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
+ + LL KC K L QG+ VHA + + + + + L+ +YA CG + AR VF+K+
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM 121
Query: 74 PNPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
P + + W + S ++ + + +A+ +F+ M F Y N+FT S V+KA
Sbjct: 122 PQRD--FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G Q+H + GF+++V VG+AL+D+Y++ GL+ A+ VF + R+ VSW ++I+G+
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY---------------------------------- 217
S ++A+ LF+ M +G P+ F+Y
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 218 -NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
N ++ YA+ G + A F R+ D+V+WN++++ +AQ EA+ F+ M
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
GI+PN ++ VL A +G + G + L+ + G+ + + ++D+ + G L
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Query: 337 DARTLFEITRIKNVAS-WNAMIGCYGKHGMVD----SSIELFERMLEEGMRANEVTLISV 391
A E I+ A+ W A++ H + ++ +FE L+ V L ++
Sbjct: 416 RALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFE--LDPDDPGPHVILYNI 473
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVK 418
++ GG + + MKE GVK
Sbjct: 474 YAS---GGRWNDAARVRKKMKES-GVK 496
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/513 (31%), Positives = 274/513 (53%), Gaps = 21/513 (4%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C ALR G Q+H D + + + +Y C +++ A+ +F+ +PN N+
Sbjct: 285 CAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSY 344
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
N +++ A + + +G ++ + S +AC + +G QVH ++ +
Sbjct: 345 NAIIVGYARS---DKGLGL-----------DEVSLSGAFRACAVIKGDLEGLQVHGLSMK 390
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
++++ V NA++DMY KCG L A VF M RD VSW ++I+ + ++ + L
Sbjct: 391 SLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSL 450
Query: 202 F--ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
F R+ L + F A+I Y++ G A R+ + +V+WNA+ISGF
Sbjct: 451 FIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQ----TVVSWNAIISGF 506
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
+ K+ EA K F ML G+ P+N T +L ++++G++IHA + + L D
Sbjct: 507 SLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDA 566
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+ S L+DMYSKCG+++D + +FE ++ +WNAM+ Y +HG+ + ++++FE M E
Sbjct: 567 YISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLE 626
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
++ N T ++VL AC H GLVEKGL F SM YG+ EHY+CVVD++ RSG++ +
Sbjct: 627 NVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSK 686
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A +L+ +P + + C IHG ++A ++ +V+LSNI A
Sbjct: 687 ALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYAN 746
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
G W+E LRK+M+ ++K+PG S +E ++E
Sbjct: 747 AGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSE 779
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 186/377 (49%), Gaps = 19/377 (5%)
Query: 57 YAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTF 116
YAG GD+ A+ +FD +P +V N ++ G+ ++ I F M ++ TF
Sbjct: 118 YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTF 177
Query: 117 SIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE 176
++VLK+C L D G Q+H +A +MGF+ DV G+AL+DMY+KC L + + FH M E
Sbjct: 178 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPE 237
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAF 236
++ VSW+++I+G + + LF+ M+ G+ +Q T+ ++ S A
Sbjct: 238 KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQL 297
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV------ 290
F D+V A + + + ++A KLF + ++ N + G
Sbjct: 298 HGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKG 357
Query: 291 --LQAGGLTGSIQI---------GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
L L+G+ + G ++H L + ++ +A++DMY KCG+L +A
Sbjct: 358 LGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEAC 417
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF--ERMLEEGMRANEVTLISVLSACSH 397
+FE ++ SWNA+I + ++G + ++ LF R+++ + + I+++ S
Sbjct: 418 LVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSK 477
Query: 398 GGLVEKGLEIFRSMKER 414
G++EK ++ + E+
Sbjct: 478 CGMMEKAEKLHDRLAEQ 494
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 148/337 (43%), Gaps = 42/337 (12%)
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
K TFS + + C + GKQ HA F+ V V N LI MY KC L A +VF
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD 101
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
GM +RD VSW +M+ GY + A LF+ M E + ++N++I+ Y GD
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMP----ERDVVSWNSLISGYLHNGDHRK 157
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
F +M G V D T+ ++ + + +
Sbjct: 158 VIDVFLQMGRMGTVFDRTTFAVVLK----------------------------SCSSLED 189
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
GG G +IH L +MG DV TGSAL+DMY+KC L + F KN S
Sbjct: 190 HGG-------GIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVS 242
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSM 411
W+A+I ++ + +ELF+ M + G+ ++ T SV +C+ + G ++ ++
Sbjct: 243 WSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHAL 302
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
K +G + +DM + + +A L +P
Sbjct: 303 KTDFGTDVVIG--TATLDMYMKCNNLSDAQKLFNSLP 337
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + GKQ+HA + +L + + S LV +Y+ CG++ +L+F+K PN +
Sbjct: 537 ILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRD 596
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQVH 136
N MV A G +EA+ F M+ + N TF VL+AC + ++KG H
Sbjct: 597 FVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFH 656
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMIS 187
++ + G + + + ++D+ + G + A + GM FE D V W +++S
Sbjct: 657 SMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 708
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 168/508 (33%), Positives = 267/508 (52%), Gaps = 49/508 (9%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
A VFDK+P N+ M+ A G ++AI F M Y ++FT+S VL AC
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC---GLLCSARRVFHGMFERDVVSW 182
L + GKQ+H+ ++G DV VG +L+DMY+KC G + +R+VF M E +V+SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 183 TSMISGYCNVSKVD-EAVVLFERMKLEGLEPNQFTY------------------------ 217
T++I+ Y + D EA+ LF +M + PN F++
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 218 -----------NAIIASYARRG---DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
N++I+ YAR G D+ AF F +LV++NA++ G+A++
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDIL-------FEKNLVSYNAIVDGYAKNL 241
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
+ EA LF + +GI + T +L G++ G +IH + + G + +
Sbjct: 242 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 301
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
ALI MYS+CG+++ A +F +NV SW +MI + KHG ++E+F +MLE G +
Sbjct: 302 ALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP 361
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
NE+T ++VLSACSH G++ +G + F SM + +G+ EHYAC+VD+L RSG +VEA +
Sbjct: 362 NEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEF 421
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ +P+ + C +HG +L E E P +++LSN+ A+ G+W
Sbjct: 422 INSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQW 481
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+ +RK MKE+N+ K+ G S +E N
Sbjct: 482 KDVVKIRKSMKERNLIKEAGCSWIEVEN 509
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 215/449 (47%), Gaps = 61/449 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGC---GDVNSARLVFDKIP 74
+L C + L GKQ+H+ + L + + LV +YA C G V+ +R VF+++P
Sbjct: 62 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 121
Query: 75 NPNVFMLNWMVMASAFTGNF-QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
NV ++ A A +G +EAI F M R N F+FS VLKAC L D G+
Sbjct: 122 EHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 181
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
QV++ A ++G + VGN+LI MY++ G + AR+ F +FE+++VS+ +++ GY
Sbjct: 182 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNL 241
Query: 194 KVDEAVVLFERMKLEGLEPNQFTY-----------------------------------N 218
K +EA +LF + G+ + FT+ N
Sbjct: 242 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 301
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+I+ Y+R G+ AAF F+ M ++++W +MI+GFA+ AL++F ML +
Sbjct: 302 ALISMYSRCGNIEAAFQVFNEMEDR----NVISWTSMITGFAKHGFATRALEMFHKMLET 357
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREI-------HALVCRMGLHIDVFTGSALIDMYSK 331
G KPN +T VL A G I G++ H +V RM + + ++D+ +
Sbjct: 358 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHY------ACMVDLLGR 411
Query: 332 CGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLI 389
G L +A + + + W ++G HG + E +LE E L+
Sbjct: 412 SGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILL 471
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVK 418
S L A + G + ++I +SMKER +K
Sbjct: 472 SNLHASA--GQWKDVVKIRKSMKERNLIK 498
>gi|347954456|gb|AEP33728.1| chlororespiratory reduction 21, partial [Brassica oleracea]
Length = 643
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 272/531 (51%), Gaps = 6/531 (1%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVY 57
RL+ + V + C+ + A + +GK HAL N L + + L + ++ Y
Sbjct: 71 RLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKXSHALAVVNGLELDNILGTSILNFY 130
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
G ++ A +VFD++ +V N ++ G ++AI LMR + + T S
Sbjct: 131 CKVGLIDYAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCQLMRLEKLKFDCVTLS 190
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
++ + K GK+V + FE+D+ + +A +DMY+KCG + A++VF ++
Sbjct: 191 TLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASAAVDMYAKCGSIVDAKKVFDSTVQK 250
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
D++ W ++++ Y EA+ LF M+LE + PN T+N II S R G + A F
Sbjct: 251 DLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKEMF 310
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+M + G VP +V+W M++G + EA+ + M SG++PN ++T L A
Sbjct: 311 LQMQSSGIVPTIVSWTTMMNGLVXNGCSEEAIHYLRKMQESGMRPNVFSITVALSACANL 370
Query: 298 GSIQIGREIHALVCRMGLH-IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
S+ GR +H + R LH V ++L+DMY+KCG + A +F + +NAM
Sbjct: 371 ASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFSELPLYNAM 430
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I Y +G V+ ++ L+ + + G++ + +T ++LSAC+H G + + +EIF M ++G
Sbjct: 431 ISAYALYGNVEEAMALYGSLEDMGIKPDNITFTNILSACNHAGDINQAIEIFSDMVSKHG 490
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
VK EHY +VD+L +G +A L+ ++P M + CN + +L +
Sbjct: 491 VKPCLEHYGLMVDLLASAGETEKALRLMEEMPYEPDARMIQSLLATCNKEHKTELVEYLS 550
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
++ E +V +SN A +G W E +R++MK K ++KQPG S +
Sbjct: 551 KQLLESEPDNSGNYVTISNAYAGEGSWDEVVKMREMMKAKGLKKQPGCSWI 601
>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
Length = 726
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 288/533 (54%), Gaps = 44/533 (8%)
Query: 33 KQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
+Q+HAL + L ++F + + LV Y+ G + AR VFD +P ++ N ++ A
Sbjct: 151 RQLHALAWRSGLAADVF-VGNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQ 209
Query: 91 TGNFQ-EAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
G+ E IG F ++R+ + ++ + V+ AC G ++ G+QVH A ++G E V
Sbjct: 210 DGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYV 269
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
S+GN L+ MY KCG SARR+F M ERDVVSWT+ IS ++A+ LF M+ +
Sbjct: 270 SIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAIS-----MDGEDALTLFNGMRRD 324
Query: 209 GLEPNQFTYNAIIASY-------------------ARRGDSNAA------FAFFSRMTAE 243
G+ PN+ T+ A++++ A G++ A+ +A RM
Sbjct: 325 GVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDA 384
Query: 244 GFVPDL------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA--GG 295
V DL + WNA+ISG+AQ+ R N+AL+LF M + PN T VL A
Sbjct: 385 RMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSM-ARCLTPNETTFASVLSAVTAV 443
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
T S+ G+ H+ MG + ALIDMY+K G+L+++R F T +++ +W A
Sbjct: 444 ETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTA 503
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
+I +HG + + LF M G+ + V L++VL+AC +GG+V+ G +IF SM
Sbjct: 504 IISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAADR 563
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTM 475
GV++ EHY+CVVDML R+GR+ EA +L+ ++P + S + C IHG ++ +
Sbjct: 564 GVELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGACRIHGDAEIGERI 623
Query: 476 GEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
E + +V+LSNI A G+W +R+ M+++ V+K+ GFS V+
Sbjct: 624 ARILTEKEPTESGAYVLLSNIYADVGDWDGVAKVRRKMRDRGVKKEIGFSWVD 676
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 186/409 (45%), Gaps = 56/409 (13%)
Query: 96 EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALI 155
+ I + SL R R N FS ++A D +HAVA G +V N+L
Sbjct: 21 DGIPHPSLARH--RRVNPIAFSAAVRAS----DPASLPALHAVAVTTGLHGFAAVTNSLA 74
Query: 156 DMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV--------------DEAVVL 201
Y+K G SA VF RDV S+ +++S + + ++ +AV
Sbjct: 75 ARYAKTGSFPSAVGVFAAARARDVSSYNTILSAFPDPAEALDFASWMLRSGAVRPDAVTC 134
Query: 202 FERMKL-------------------EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA 242
+ L GL + F NA++ +Y+R G A + F M A
Sbjct: 135 TVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVGNALVTAYSRGGSLGEARSVFDDMPA 194
Query: 243 EGFVPDLVTWNAMISGFAQSKR-ENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSI 300
DLV+WNA+I G AQ E + +F ML G ++P+ ++V V+ A G G +
Sbjct: 195 R----DLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKL 250
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY 360
++GR++H ++G+ V G+ L+ MY KCG+ AR LF+ ++V SW I
Sbjct: 251 ELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAISMD 310
Query: 361 GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKIS 420
G + ++ LF M +G+ NEVT ++++SA +G ++ + + V
Sbjct: 311 G-----EDALTLFNGMRRDGVPPNEVTFVALMSALP-ADCPARGAQMVHAACLKAAVSGE 364
Query: 421 KEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNS-MAGAFRNG-CN 464
++ M ++ RM +A +DL+ + + N+ ++G +NG CN
Sbjct: 365 AAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCN 413
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 169/550 (30%), Positives = 279/550 (50%), Gaps = 47/550 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK-LVGVYAGCGDVNSARLVFDKIPNPN 77
+L C+ ++ G VHA + + S L+ +YA ++ + VF+ + N
Sbjct: 177 ILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVN 236
Query: 78 VFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
V ++W M + FT N + +A F M + TF V KA L D+ K K+V
Sbjct: 237 V--VSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE--RDVVSWTSMISGYCNVS 193
A ++G +++ VG ALIDM SKCG L AR +F+ F R W +MISGY
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSG 354
Query: 194 KVDEAVVLFERMKLEGLEPNQFTY------------------------------------ 217
++A+ LF +M + + +TY
Sbjct: 355 FNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSIS 414
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
NA+ +YA+ G F+RM DL++W ++++ ++Q ++A+++F M
Sbjct: 415 NAVANAYAKCGSLEDVRKVFNRMEDR----DLISWTSLVTAYSQCSEWDKAIEIFSNMRA 470
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
GI PN T + VL + ++ G+++H ++C++GL +D SAL+DMY+KCG L D
Sbjct: 471 EGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGD 530
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A+ +F + SW A+I + +HG+VD +++LF RM++ G+ N VT + VL ACSH
Sbjct: 531 AKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSH 590
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
GGLVE+GL+ F+ MK+ YG+ EHYAC+VD+L R G + +A + + ++P+ +
Sbjct: 591 GGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQ 650
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
C +HG +L ++ +V+LSN G + + +LR +MKE+
Sbjct: 651 TLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQG 710
Query: 518 VQKQPGFSRV 527
V+K+PG S +
Sbjct: 711 VKKEPGCSWI 720
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 147/546 (26%), Positives = 259/546 (47%), Gaps = 42/546 (7%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL---NIFSLKSKLVGVYAGCGDVNS 65
++L + L LL C+ ++ L+Q K VH L + + L + + Y+ C D+++
Sbjct: 64 SHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDA 123
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
A +FD++ N F ++ A G F + +F M+ ++F +S +L+ C+G
Sbjct: 124 ACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIG 183
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
L I+ G VHA GF + V AL++MY+K + + +VF+ M E +VVSW +M
Sbjct: 184 LDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAM 243
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA------------ 233
I+G+ + +A LF RM EG+ P+ T+ + + D N A
Sbjct: 244 ITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGV 303
Query: 234 -------FAFFSRMTAEG--------FVPDLVT------WNAMISGFAQSKRENEALKLF 272
A + G F +T WNAMISG+ +S +AL+LF
Sbjct: 304 DSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELF 363
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID-VFTGSALIDMYSK 331
M + I ++ T V A + +G+++HA + GL ++ V +A+ + Y+K
Sbjct: 364 AKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAK 423
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
CGSL+D R +F +++ SW +++ Y + D +IE+F M EG+ N+ T SV
Sbjct: 424 CGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSV 483
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
L +C++ L+E G ++ + + G+ + K + +VDM + G + +A + ++
Sbjct: 484 LVSCANLCLLEYGQQV-HGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNAD 542
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENL 509
T S A G HG D A+ + ++G+ +P+ L + C+ G E
Sbjct: 543 TVSWT-AIIAGHAQHGIVDDALQLFRRMVQLGV-EPNAVTFLCVLFACSHGGLVEEGLQY 600
Query: 510 RKIMKE 515
K+MK+
Sbjct: 601 FKLMKK 606
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 180/346 (52%), Gaps = 16/346 (4%)
Query: 27 KALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
K L GK+VHA + L N S+ + + YA CG + R VF+++ + + +++W
Sbjct: 389 KCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRD--LISWT 446
Query: 85 VMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
+ +A++ + +AI FS MR N+FTFS VL +C L ++ G+QVH + ++
Sbjct: 447 SLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKV 506
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G + D + +AL+DMY+KCG L A++VF+ + D VSWT++I+G+ VD+A+ LF
Sbjct: 507 GLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLF 566
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQ 261
RM G+EPN T+ ++ + + G +F M G VP++ + ++ ++
Sbjct: 567 RRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSR 626
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
N+A++ M V +PN + +L A + G++++G E+ A + T
Sbjct: 627 VGHLNDAMEFISRMPV---EPNEMVWQTLLGACRVHGNVELG-ELAAQKILSFKAENSAT 682
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNV-----ASWNAMIGCYGK 362
L + Y + GS KD +L + + + V SW ++ G K
Sbjct: 683 YVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHK 728
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 247/447 (55%), Gaps = 32/447 (7%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
++ +LK C + +G+ VHA Q F +D+ +GN L++MY+KCG L AR+VF M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA--RRG----- 228
+RD V+WT++ISGY + +A++ F +M G PN+FT +++I + A RRG
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 229 ----------DSNAAF--AFFSRMTAEGFVPDL------------VTWNAMISGFAQSKR 264
DSN A T G + D V+WNA+I+G A+
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+AL+LF+GML G +P++ + + A TG ++ G+ +HA + + G + F G+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+DMY+K GS+ DAR +F+ ++V SWN+++ Y +HG ++ FE M G+R N
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
E++ +SVL+ACSH GL+++G + MK+ G+ HY VVD+L R+G + A +
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
++P+ T ++ A N C +H +L E FE+ P V+L NI A+ G W+
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRN 531
+A +RK MKE V+K+P S VE N
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEIEN 508
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 214/447 (47%), Gaps = 55/447 (12%)
Query: 15 YLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
+ + LL KC K L QG+ VHA + + + + + L+ +YA CG + AR VF+K+
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM 121
Query: 74 PNPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
P + + W + S ++ + + +A+ +F+ M F Y N+FT S V+KA
Sbjct: 122 PQRD--FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G Q+H + GF+++V VG+AL+D+Y++ GL+ A+ VF + R+ VSW ++I+G+
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY---------------------------------- 217
S ++A+ LF+ M +G P+ F+Y
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 218 -NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
N ++ YA+ G + A F R+ D+V+WN++++ +AQ EA+ F+ M
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
GI+PN ++ VL A +G + G + L+ + G+ + + ++D+ + G L
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Query: 337 DARTLFEITRIKNVAS-WNAMIGCYGKHGMVD----SSIELFERMLEEGMRANEVTLISV 391
A E I+ A+ W A++ H + ++ +FE L+ V L ++
Sbjct: 416 RALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFE--LDPDDPGPHVILYNI 473
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVK 418
++ GG + + MKE GVK
Sbjct: 474 YAS---GGRWNDAARVRKKMKES-GVK 496
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 168/479 (35%), Positives = 259/479 (54%), Gaps = 40/479 (8%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
L++ L+ Y G AR +FD++ + NV N M++ A GN + F MR
Sbjct: 100 LRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHG 159
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ FT +L C L + K GK VHA + +++ + NAL+DMY KC L AR
Sbjct: 160 LEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLAR 219
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
+VF G E+D VSW ++I+GY V +++ A LF ++ + ++N++I+ YA+ G
Sbjct: 220 KVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDI----VSWNSLISGYAQNG 275
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
D F+RM AE PD VT +IS A+
Sbjct: 276 DYVTVKCLFTRMFAENVKPDKVTIVNLISAVAE--------------------------- 308
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
G++ GR IH L +M I+ F+GSALIDMY KCGS++ A +F K
Sbjct: 309 --------MGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEK 360
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+V +W MI + HG + ++ELF M E + N+VT +SVL+ACSH GLV++GL+IF
Sbjct: 361 DVTTWTTMITGFAFHGFGNKALELFSVMQAE-TKPNDVTFVSVLAACSHSGLVDEGLKIF 419
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
SMK+RY ++ EHY C+VD+LCRSGR+++A ++ ++PM + S+ GA + C +H
Sbjct: 420 SSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRN 479
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
+LA E ++ K G+++LSN+ A G W ++++R++M + V+K G S V
Sbjct: 480 MELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSV 538
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 303/585 (51%), Gaps = 73/585 (12%)
Query: 28 ALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYA--GCGDVNSARLVFDKIPNPNVFMLNWM 84
++ Q KQ+ A + CT +N S+L+ A GD++ A L+FD+ PN F W
Sbjct: 64 SMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFF--WN 121
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKF---TFSIVLKACVGLLDIKKGKQVHAVATQ 141
M + ++G FS R+ I +F +F LKAC + G VH+V +
Sbjct: 122 TMIKGYCKANHPSMG-FSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
GF++D+ V N LI Y + G L AR++F +DVV+WT+MI+GY + +DEA+ L
Sbjct: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDS----------------------NAAFAFFSR 239
F M ++PN+ T A++++ +++GDS NA + +
Sbjct: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVK 300
Query: 240 ----MTAEGFVP-----DLVTWNAMISGFA------------------------------ 260
TA D+ +W ++++G+A
Sbjct: 301 CGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGY 360
Query: 261 -QSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA-LVCRMGLHI 317
Q+ + EAL+LF M+ V G+ P T+ VL A G G +++G+EIH V ++G+ +
Sbjct: 361 SQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQV 420
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
+ +A++DMY+KCGS+ A LF KN+ SWN+MI Y +G ++ LF++M+
Sbjct: 421 SLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMI 480
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
G++ + +T I VLSACS+GG V +G F SM+ +GV+ +EHYAC+VD+L R G +
Sbjct: 481 GSGLKPDHITFIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLL 540
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
EAY+L+ ++PM + GA + C HG ++A GE+ E+ + +L+NIC
Sbjct: 541 KEAYELISRMPMEASEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANIC 600
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
A +W + +R++M+E+ V+K PG S +E +F E V + S
Sbjct: 601 ADGKKWKDVRMVRRMMRERGVKKVPGHSLIEIEGKFHEFLVADTS 645
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 183/560 (32%), Positives = 280/560 (50%), Gaps = 56/560 (10%)
Query: 3 RLIFPINNLSVNYL-DCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCG 61
R +F N + Y+ +C LG +++ L+ D + S S L G YA G
Sbjct: 109 RDLFSWNVMLTGYVRNCRLG---------DARRLFDLMPEKD--VVSWNSLLSG-YAQNG 156
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLK 121
V+ AR VFD +P N N ++ A G +EA F +K + ++
Sbjct: 157 YVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE---------SKSDWDLISW 207
Query: 122 ACV--GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
C+ G + KK + +M + +S N +I Y++ G L ARR+F RDV
Sbjct: 208 NCLMGGFVRKKKLGDARWLFDKMPVRDAIS-WNTMISGYAQGGGLSQARRLFDESPTRDV 266
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
+WT+M+SGY +DEA F+ M E N+ +YNA+IA Y + + A F
Sbjct: 267 FTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFES 322
Query: 240 M------------TAEGFVPDL---------------VTWNAMISGFAQSKRENEALKLF 272
M T G + D+ V+W A+I+G+AQS EAL +F
Sbjct: 323 MPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMF 382
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
+ G N T L ++++G++IH +MG F G+AL+ MY KC
Sbjct: 383 VEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKC 442
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
GS+ +A FE K+V SWN M+ Y +HG ++ +FE M G++ +E+T++ VL
Sbjct: 443 GSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVL 502
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
SACSH GL+++G E F SM + YGV + +HY C++D+L R+GR+ EA DL+R +P
Sbjct: 503 SACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPG 562
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
+ GA IHG +L E F+M + +V+LSN+ AA G W +A+ +R
Sbjct: 563 AASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSK 622
Query: 513 MKEKNVQKQPGFSRVEKRNE 532
M++ VQK PG+S VE +N+
Sbjct: 623 MRDIGVQKVPGYSWVEVQNK 642
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 174/376 (46%), Gaps = 33/376 (8%)
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
++ +P++ N + G+ A+ F+ M R + +++ ++ G L K
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMP----RRSSVSYNAMIS---GYLRNSK 95
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
+ QM E D+ N ++ Y + L ARR+F M E+DVVSW S++SGY
Sbjct: 96 FNLARNLFDQMP-ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQ 154
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
VDEA +F+ M E N ++N ++A+Y G A F + DL++
Sbjct: 155 NGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACLLFESKSDW----DLIS 206
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
WN ++ GF + K+ +A LF M V N ++G Q GGL+ + ++ E
Sbjct: 207 WNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR-- 264
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
DVFT +A++ Y + G L +A+T F+ KN S+NAMI Y + +D + E
Sbjct: 265 ------DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARE 318
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LFE M N + ++++ G + + + F M +R V +A ++
Sbjct: 319 LFESMPCR----NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVS-----WAAIIAGY 369
Query: 432 CRSGRMVEAYDLLRQV 447
+SG EA ++ ++
Sbjct: 370 AQSGHYEEALNMFVEI 385
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 131/310 (42%), Gaps = 62/310 (20%)
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
+P+ +N I+++ R G ++A F+ M V ++NAMISG+ ++ + N A
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSV----SYNAMISGYLRNSKFNLARN 101
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
LF M + NV +TG ++ CR+G
Sbjct: 102 LFDQMPERDLFSWNVMLTGYVRN-----------------CRLG---------------- 128
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
DAR LF++ K+V SWN+++ Y ++G VD + E+F+ M E+ N ++
Sbjct: 129 ------DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNG 178
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY 450
+L+A H G +E+ +F S + + + C++ R ++ +A L ++P+
Sbjct: 179 LLAAYVHNGRIEEACLLFESKSDWDLIS-----WNCLMGGFVRKKKLGDARWLFDKMPVR 233
Query: 451 VT---NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAE 507
N+M + G + R L F E R + + + +G EA+
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRL-------FDESPTRDVFTWTAMVSGYVQNGMLDEAK 286
Query: 508 NLRKIMKEKN 517
M EKN
Sbjct: 287 TFFDEMPEKN 296
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 46/152 (30%)
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
+ GL++ G E F M E Y V + +HY C++D+L R R+ E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
GA IHG +L + FF+MG + S I M++
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQN-------SGISK--------------MRDV 857
Query: 517 NVQKQPGFSRVEKRNE--------FVEKEVQN 540
VQK PG+S E +N+ F+ +E +N
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVGLFLSREREN 889
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 265/506 (52%), Gaps = 18/506 (3%)
Query: 33 KQVHALLCTNDLN---------IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
KQ+HAL+ N L + + +VG A + A +F +IP P+ FM N
Sbjct: 18 KQIHALMIVNGLTSNVGFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQIPQPDTFMWNT 77
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
+ S+ + + A+ ++ M + + + FTF VLKAC L + G VH ++G
Sbjct: 78 YIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTGSAVHGRVLRLG 137
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
F ++V V N L+ ++KCG L A +F + DVV+W+++I+GY + A LF+
Sbjct: 138 FGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAGYAQRGDLSVARKLFD 197
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
M L ++N +I Y + G+ +A F E + D+V+WNA+I G+
Sbjct: 198 EMPKRDL----VSWNVMITVYTKHGEMESARRLFD----EAPMKDIVSWNALIGGYVLRN 249
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL-HIDVFTG 322
EAL+LF M G P+ VT+ +L A G ++ G ++HA + M + G
Sbjct: 250 LNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNKGKLSTLLG 309
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+AL+DMY+KCG++ A +F + R K+V SWN++I HG + S+ LF M +
Sbjct: 310 NALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTKVC 369
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
+EVT + VL+ACSH G V++G F MK +Y ++ + H CVVDML R+G + EA++
Sbjct: 370 PDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFN 429
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
+ + + + + C +HG +LA E+ M + +V+LSN+ A+ GE
Sbjct: 430 FIASMKIEPNAIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYVLLSNVYASQGE 489
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVE 528
W AEN+RK+M + V K G S VE
Sbjct: 490 WDGAENVRKLMDDNGVTKNRGSSFVE 515
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 190/608 (31%), Positives = 292/608 (48%), Gaps = 98/608 (16%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L +L C + + R G H L+C N + N+F + + LV +Y+ CG + A ++FD+I
Sbjct: 165 LPHVLKACGELPSYRCGSAFHGLICCNGFESNVF-ICNALVAMYSRCGSLEEASMIFDEI 223
Query: 74 PN---PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIY------RCNKFTFSIVLKACV 124
+V N +V A + N A+ FS M ++ R + + +L AC
Sbjct: 224 TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACG 283
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH------------ 172
L + + K+VH A + G DV VGNALID Y+KCGL+ +A +VF+
Sbjct: 284 SLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNA 343
Query: 173 --------GMFER---------------DVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
G FE DVV+WT++I+GY EA+ LF +M G
Sbjct: 344 MVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSG 403
Query: 210 LEPNQFT---------------------------------------------YNAIIASY 224
PN T YNA+I Y
Sbjct: 404 SLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 463
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS--GIKP 282
++ AA + F + E ++VTW MI G AQ N+ALKLF M+ G+ P
Sbjct: 464 SKCRSFKAARSIFDDIPLEE--RNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 521
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID--VFTGSALIDMYSKCGSLKDART 340
N T++ +L A +I+IG++IHA V R + F + LIDMYSKCG + AR
Sbjct: 522 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARH 581
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F+ K+ SW +M+ YG HG ++++F++M + G +++T + VL ACSH G+
Sbjct: 582 VFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGM 641
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V++GL F SM YG+ EHYAC +D+L RSGR+ +A+ ++ +PM T + A
Sbjct: 642 VDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALL 701
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+ C +H +LA + EM + ++SNI A G W + +R +MK+ ++K
Sbjct: 702 SACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKK 761
Query: 521 QPGFSRVE 528
+PG S V+
Sbjct: 762 RPGCSWVQ 769
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 156/540 (28%), Positives = 236/540 (43%), Gaps = 100/540 (18%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKI-PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE 106
SL + +V Y CG + A LV +++ P+P V+ N ++ G AI M
Sbjct: 97 SLGTGVVASYLACGATDYALLVLERVTPSPAVWW-NLLIREHIKQGRLDSAINVSCRMLR 155
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
R + FT VLKAC L + G H + GFE++V + NAL+ MYS+CG L
Sbjct: 156 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 215
Query: 167 ARRVFHGMFER---DVVSWTSMISGYCNVSKVDEAVVLFERMKL---------------- 207
A +F + +R DV+SW S++S + S A+ LF +M L
Sbjct: 216 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 275
Query: 208 -------------------------EGLEPNQFTYNAIIASYAR---------------- 226
G P+ F NA+I +YA+
Sbjct: 276 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 335
Query: 227 ---------------RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
G+ AAF F M E D+VTW A+I+G++Q +EAL L
Sbjct: 336 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 395
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM----------GLHIDVFT 321
F+ M+ SG PN VT+ VL A G+ G EIHA + G D+
Sbjct: 396 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMV 455
Query: 322 GSALIDMYSKCGSLKDARTLFEITRI--KNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+ALIDMYSKC S K AR++F+ + +NV +W MIG + ++G + +++LF M+ E
Sbjct: 456 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 515
Query: 380 --GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA-CVVDMLCRSGR 436
G+ N T+ +L AC+H + G +I + + + S A C++DM + G
Sbjct: 516 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGD 575
Query: 437 MVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+ A +D + Q SM G +HGR A+ + ++ + G PD L
Sbjct: 576 VDTARHVFDSMSQKSAISWTSM----MTGYGMHGRGSEALDIFDKMRKAGF-VPDDITFL 630
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 266/483 (55%), Gaps = 21/483 (4%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N+ S + L G Y G + AR +FD+IP+ NV N M+ + +EA F+ M
Sbjct: 228 NVVSWVTLLNG-YCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEM 286
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
+ N +++ ++ A V +++ K + +M F++ + AL+ Y + ++
Sbjct: 287 PD----KNSISWTTMISALVRGGKLQEAKDL---LDKMPFDS-FAAKTALMHGYLQSKMI 338
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ--FTYNAIIA 222
AR +F G+ RD V W +MISGY + +DEA+VLF++M PN+ ++N +IA
Sbjct: 339 DDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQM------PNKDMVSWNTMIA 392
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA G A F +M + V+WN++ISGF Q+ EAL+ F M +
Sbjct: 393 GYAHDGQMRKAVGIFRKMNQR----NTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRA 448
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ T L A ++ +GR+ H+L+ R G D F G+ALI Y+KCG + +AR +F
Sbjct: 449 DWSTYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVF 508
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ ++ SWNA+I Y +G +I +F M + +R +EVT + VLSACSH GL++
Sbjct: 509 DEMPAPDIVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLID 568
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G + F SM + Y ++ EHYAC+VD+L RSGR+ EA+++++ + + + GA
Sbjct: 569 EGFDFFNSMTKDYALRPVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGA 628
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C +H +LA E+ +E+ K +V+LSNI A G+W EA+N+R +KE+ V K P
Sbjct: 629 CRVHKNHELAQLAAEKLYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHKTP 688
Query: 523 GFS 525
G +
Sbjct: 689 GLA 691
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 174/381 (45%), Gaps = 42/381 (11%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPN-VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC 111
+V YA G++ AR D++P N M+ A G F +A+ +L+RE +
Sbjct: 110 MVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAV---ALLRE-MPAP 165
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVA--TQMGFENDVSVGNALIDMYSKCGLLCSARR 169
+ +++ VL VGL + G+ V AV +M + VS N +++ Y + G + SA
Sbjct: 166 DIISWNSVL---VGL--TRNGEMVRAVKFFDEMPARDMVS-WNLMLEGYVRAGDVDSAAG 219
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD 229
+F G+ +VVSW ++++GYC ++ EA LF+R+ + N +N +++ Y R
Sbjct: 220 LFAGVPSPNVVSWVTLLNGYCRAGRIGEARELFDRIP----DRNVAAWNVMLSGYLRLSH 275
Query: 230 SNAAFAFFSRMTAEGFVPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
A+ F+ M PD ++W MIS + + EA L M +
Sbjct: 276 MEEAYKLFTEM------PDKNSISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALM 329
Query: 288 TGVLQAGGLTGSIQI--GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
G LQ+ + + I G E+ VC + +I Y CG L +A LF+
Sbjct: 330 HGYLQSKMIDDARLIFDGLEVRDAVC----------WNTMISGYVHCGMLDEAMVLFQQM 379
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
K++ SWN MI Y G + ++ +F +M + N V+ SV+S GL + L
Sbjct: 380 PNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQR----NTVSWNSVISGFVQNGLCVEAL 435
Query: 406 EIFRSMKERYGVKISKEHYAC 426
+ F M+ R + YAC
Sbjct: 436 QHFVLMR-RDAKRADWSTYAC 455
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 185/420 (44%), Gaps = 65/420 (15%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
++ A G + AR +FD+IP N N M+ A + G +A F M +
Sbjct: 48 MLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLFDAMPAR----D 103
Query: 113 KFTFSIVLKAC------VGL----LDIKKGKQVHAVATQM--GFEN-------------- 146
F++++++ +C +GL LD G + A M G+
Sbjct: 104 GFSWTLMV-SCYARAGELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREM 162
Query: 147 ---DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
D+ N+++ ++ G + A + F M RD+VSW M+ GY VD A LF
Sbjct: 163 PAPDIISWNSVLVGLTRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFA 222
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD--LVTWNAMISGFAQ 261
+ PN ++ ++ Y R G A F R +PD + WN M+SG+ +
Sbjct: 223 GVP----SPNVVSWVTLLNGYCRAGRIGEARELFDR------IPDRNVAAWNVMLSGYLR 272
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
EA KLF M N+++ T ++ A G +Q E L+ +M D F
Sbjct: 273 LSHMEEAYKLFTEM----PDKNSISWTTMISALVRGGKLQ---EAKDLLDKMPF--DSFA 323
Query: 322 G-SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
+AL+ Y + + DAR +F+ +++ WN MI Y GM+D ++ LF++M +
Sbjct: 324 AKTALMHGYLQSKMIDDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKD 383
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
M V+ ++++ +H G + K + IFR M +R V + V+ ++G VEA
Sbjct: 384 M----VSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTVS-----WNSVISGFVQNGLCVEA 434
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 140/325 (43%), Gaps = 68/325 (20%)
Query: 24 MKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFD---------- 71
M S +R GK A LL + F+ K+ L+ Y ++ ARL+FD
Sbjct: 297 MISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAVCW 356
Query: 72 ---------------------KIPNPNVFMLNWMVMASAFTGNFQEAIG----------- 99
++PN ++ N M+ A G ++A+G
Sbjct: 357 NTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTV 416
Query: 100 --------------------YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
+F LMR R + T++ L AC L + G+Q H++
Sbjct: 417 SWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQFHSLL 476
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
+ G+ D GNALI Y+KCG + AR+VF M D+VSW ++I GY + EA+
Sbjct: 477 ARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAI 536
Query: 200 VLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISG 258
+F M+ + P++ T+ ++++ + G + F FF+ MT + P + M+
Sbjct: 537 SVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHYACMVDL 596
Query: 259 FAQSKRENEALKLFKGMLVSGIKPN 283
+S R +EA ++ +GM V +PN
Sbjct: 597 LGRSGRLSEAFEIIQGMQV---QPN 618
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 149/307 (48%), Gaps = 25/307 (8%)
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
M N VS NA++ ++ G + ARR+F + R+ VSW +MI+ + +V +A L
Sbjct: 37 MPSRNTVSY-NAMLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDL 95
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
F+ M + F++ +++ YAR G+ A RM + +NAMISG+A+
Sbjct: 96 FDAMPAR----DGFSWTLMVSCYARAGELGLARDALDRMPGDKCT---ACYNAMISGYAK 148
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
R ++A+ L + M I N + G+ + G + +++ E+ A D+ +
Sbjct: 149 HGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFDEMPAR--------DMVS 200
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
+ +++ Y + G + A LF NV SW ++ Y + G + + ELF+R+ + +
Sbjct: 201 WNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAGRIGEARELFDRIPDRNV 260
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
A V L L SH +E+ ++F M ++ + + ++ L R G++ EA
Sbjct: 261 AAWNVMLSGYLR-LSH---MEEAYKLFTEMPDKNSIS-----WTTMISALVRGGKLQEAK 311
Query: 442 DLLRQVP 448
DLL ++P
Sbjct: 312 DLLDKMP 318
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNP 76
C L C AL G+Q H+LL + S + L+ YA CG + AR VFD++P P
Sbjct: 455 CCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAP 514
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLD------ 128
++ N ++ A G+ EAI F M + R ++ TF VL AC GL+D
Sbjct: 515 DIVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFF 574
Query: 129 --IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSM 185
+ K + VA ++D+ + G L A + GM + + W +M
Sbjct: 575 NSMTKDYALRPVAEHYA---------CMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAM 625
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
+ G C V K E L KL LEP++ T N ++ S
Sbjct: 626 L-GACRVHKNHELAQLAAE-KLYELEPHK-TSNYVLLS 660
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
V+ + + ++ G L AR LF+ +N S+NAM+ +HG + + LF +
Sbjct: 11 VYRSNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLF----D 66
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
E R N V+ ++++ACS G V ++F +M R G + +V R+G +
Sbjct: 67 EIPRRNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFS-----WTLMVSCYARAGELG 121
Query: 439 EAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEE 478
A D L ++P + A +G HGR D AV + E
Sbjct: 122 LARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLRE 161
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+A++ ++ G + DAR LF+ +N SWNAMI HG V + +LF + M
Sbjct: 46 NAMLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLF-----DAMP 100
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
A + +++ +C + E GL R +R Y ++ + GR +A
Sbjct: 101 ARDGFSWTLMVSC-YARAGELGLA--RDALDRMPGDKCTACYNAMISGYAKHGRFDDAVA 157
Query: 443 LLRQVP----MYVTNSMAGAFRNG 462
LLR++P + + + G RNG
Sbjct: 158 LLREMPAPDIISWNSVLVGLTRNG 181
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 168/540 (31%), Positives = 273/540 (50%), Gaps = 49/540 (9%)
Query: 28 ALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
A++ G H +C L+ Y G + +AR VF ++ + + N M+M
Sbjct: 161 AIKFGLDTHVFVCNT----------LLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMG 210
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ G +A+ F+ MR FTFS +L G+ + G QVHA+ + +
Sbjct: 211 CSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLN 270
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V V N+L+D YSKC L RR+F M ERD VS+ +I+ Y + LF M+
Sbjct: 271 VFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQK 330
Query: 208 EGLEPNQFTY-----------------------------------NAIIASYARRGDSNA 232
G + Y NA+I Y++ G +A
Sbjct: 331 LGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDA 390
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
A + FS + + ++W A+I+G+ Q+ + EAL+LF M +G++P+ T + +++
Sbjct: 391 AKSNFSNRSEKS----AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIK 446
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A I +GR++H+ + R G VF+GS L+DMY+KCG L +A F+ +N S
Sbjct: 447 ASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSIS 506
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
WNA+I Y +G ++I++FE ML G + VT +SVL+ACSH GL ++ ++ F MK
Sbjct: 507 WNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMK 566
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLA 472
+Y + KEHYACV+D L R G + +L ++P + + + C IHG ++LA
Sbjct: 567 HQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELA 626
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
++ F M +V+LSNI A G+W +A ++KIM+++ V+K+ G+S VE + +
Sbjct: 627 RVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQK 686
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 231/508 (45%), Gaps = 48/508 (9%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
NIFSL + ++ Y+ GD+ +A+ +F P+ N M+ A A G +A+ F M
Sbjct: 73 NIFSL-NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
++ T + VL L +H A + G + V V N L+D Y K GLL
Sbjct: 132 LGEGVIPDRVTVTTVLN-----LPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 186
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
+ARRVF M ++D V++ +M+ G +A+ LF M+ G+ FT+++I+
Sbjct: 187 AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVA 246
Query: 225 A---------------RRGDS-------NAAFAFFS---------RMTAEGFVPDLVTWN 253
A R S N+ F+S R+ E D V++N
Sbjct: 247 AGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYN 306
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
+I+ +A ++ L+LF+ M G + +L G + IG++IHA + +
Sbjct: 307 VIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLL 366
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
GL + G+ALIDMYSKCG L A++ F K+ SW A+I Y ++G + +++LF
Sbjct: 367 GLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLF 426
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
M G+R + T S++ A S ++ G ++ S R G K S + +VDM +
Sbjct: 427 SDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQL-HSYLIRSGYKSSVFSGSVLVDMYAK 485
Query: 434 SGRMVEAYDLLRQVPMYVT---NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGF 490
G + EA ++P + N++ A+ + +G A+ M E G PD
Sbjct: 486 CGCLDEALRTFDEMPERNSISWNAVISAYAH----YGEAKNAIKMFEGMLHCGF-NPDSV 540
Query: 491 VMLSNI--CAADGEWHEAENLRKIMKEK 516
LS + C+ +G E +MK +
Sbjct: 541 TFLSVLAACSHNGLADECMKYFHLMKHQ 568
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
H ++F+ + ++ YS G L A+ LF + +N +W M+ + G ++ LF
Sbjct: 71 HKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRA 130
Query: 376 MLEEGMRANEVTLISVLS 393
ML EG+ + VT+ +VL+
Sbjct: 131 MLGEGVIPDRVTVTTVLN 148
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 190/608 (31%), Positives = 292/608 (48%), Gaps = 98/608 (16%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L +L C + + R G H L+C N + N+F + + LV +Y+ CG + A ++FD+I
Sbjct: 158 LPHVLKACGELPSYRCGSAFHGLICCNGFESNVF-ICNALVAMYSRCGSLEEASMIFDEI 216
Query: 74 PN---PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIY------RCNKFTFSIVLKACV 124
+V N +V A + N A+ FS M ++ R + + +L AC
Sbjct: 217 TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACG 276
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH------------ 172
L + + K+VH A + G DV VGNALID Y+KCGL+ +A +VF+
Sbjct: 277 SLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNA 336
Query: 173 --------GMFER---------------DVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
G FE DVV+WT++I+GY EA+ LF +M G
Sbjct: 337 MVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSG 396
Query: 210 LEPNQFT---------------------------------------------YNAIIASY 224
PN T YNA+I Y
Sbjct: 397 SLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 456
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS--GIKP 282
++ AA + F + E ++VTW MI G AQ N+ALKLF M+ G+ P
Sbjct: 457 SKCRSFKAARSIFDDIPLEE--RNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 514
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID--VFTGSALIDMYSKCGSLKDART 340
N T++ +L A +I+IG++IHA V R + F + LIDMYSKCG + AR
Sbjct: 515 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARH 574
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F+ K+ SW +M+ YG HG ++++F++M + G +++T + VL ACSH G+
Sbjct: 575 VFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGM 634
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V++GL F SM YG+ EHYAC +D+L RSGR+ +A+ ++ +PM T + A
Sbjct: 635 VDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALL 694
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+ C +H +LA + EM + ++SNI A G W + +R +MK+ ++K
Sbjct: 695 SACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKK 754
Query: 521 QPGFSRVE 528
+PG S V+
Sbjct: 755 RPGCSWVQ 762
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 156/540 (28%), Positives = 236/540 (43%), Gaps = 100/540 (18%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKI-PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE 106
SL + +V Y CG + A LV +++ P+P V+ N ++ G AI M
Sbjct: 90 SLGTGVVASYLACGATDYALLVLERVTPSPAVWW-NLLIREHIKQGRLDSAINVSCRMLR 148
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
R + FT VLKAC L + G H + GFE++V + NAL+ MYS+CG L
Sbjct: 149 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 208
Query: 167 ARRVFHGMFER---DVVSWTSMISGYCNVSKVDEAVVLFERMKL---------------- 207
A +F + +R DV+SW S++S + S A+ LF +M L
Sbjct: 209 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 268
Query: 208 -------------------------EGLEPNQFTYNAIIASYAR---------------- 226
G P+ F NA+I +YA+
Sbjct: 269 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 328
Query: 227 ---------------RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
G+ AAF F M E D+VTW A+I+G++Q +EAL L
Sbjct: 329 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 388
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM----------GLHIDVFT 321
F+ M+ SG PN VT+ VL A G+ G EIHA + G D+
Sbjct: 389 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMV 448
Query: 322 GSALIDMYSKCGSLKDARTLFEITRI--KNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+ALIDMYSKC S K AR++F+ + +NV +W MIG + ++G + +++LF M+ E
Sbjct: 449 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 508
Query: 380 --GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA-CVVDMLCRSGR 436
G+ N T+ +L AC+H + G +I + + + S A C++DM + G
Sbjct: 509 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGD 568
Query: 437 MVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+ A +D + Q SM G +HGR A+ + ++ + G PD L
Sbjct: 569 VDTARHVFDSMSQKSAISWTSM----MTGYGMHGRGSEALDIFDKMRKAGF-VPDDITFL 623
>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
Length = 686
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 287/551 (52%), Gaps = 55/551 (9%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C+ S+ R G Q+ + + + L + + + + +Y+ G AR VFD++P +
Sbjct: 106 LSFCVGSEGFRLGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKD- 164
Query: 79 FMLNWMVMASAF----TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
M++W + S T F+ + + +MRE + + +F+ V+ C D+K +Q
Sbjct: 165 -MISWNSLLSGLSQEGTFGFEAVLIFRDMMREGV-ELDHVSFTSVITTCCHETDLKLARQ 222
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + + G+E+ + VGN L+ YSKCG+L + + VF+ M ER+VVSWT+MIS S
Sbjct: 223 IHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMIS-----SN 277
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
D+AV +F M+L+G+ PN+ T+ N+
Sbjct: 278 RDDAVSIFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNS 337
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
I YA+ A F +T ++++WNAMISGFAQ+ +EALK+F
Sbjct: 338 FITMYAKFEALEDAKKAFDDIT----FREIISWNAMISGFAQNGFSHEALKMFLSATAET 393
Query: 280 IKPNNVTVTGVLQAGGLTGSIQI--GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
+ PN T VL A I + G+ HA + ++GL+ SAL+DMY+K G++ +
Sbjct: 394 M-PNEYTFGSVLNAIAFAEDISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINE 452
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+ +F +N W ++I Y HG +S + LF M++E + + VT +SVL+AC+
Sbjct: 453 SEKVFNEMSQRNQFVWTSIISAYSSHGDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNR 512
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
G+V+KG EI M E Y ++ S EHY+C+VDML R+GR+ EA +L+ +VP SM
Sbjct: 513 KGMVDKGHEILNMMIEDYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQ 572
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
+ C +HG + + E EM +V + NI A +W +A +RK M++KN
Sbjct: 573 SMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEQWDKAAEIRKAMRKKN 632
Query: 518 VQKQPGFSRVE 528
V K+ GFS ++
Sbjct: 633 VSKEAGFSWID 643
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 197/413 (47%), Gaps = 54/413 (13%)
Query: 23 CMKSKA----LRQGKQVHALLCTNDLNIFSLKSKLV-GVYAGCGDVNSARLVFDKIPNPN 77
C+ KA L++G Q+H T F S V G+Y G ++A +F+ + +P+
Sbjct: 7 CLALKACRGDLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIFENLVDPD 66
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V ++W + S F N Q A+ + M+ + FT+S L CVG + G Q+ +
Sbjct: 67 V--VSWNTILSGFDDN-QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQS 123
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD- 196
+ G E+D+ VGN+ I MYS+ G ARRVF M +D++SW S++SG
Sbjct: 124 TVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGF 183
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
EAV++F M EG+E + ++ ++I +
Sbjct: 184 EAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 243
Query: 224 --YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y++ G A + F +M+ ++V+W MI S ++A+ +F M + G+
Sbjct: 244 SRYSKCGVLEAVKSVFYQMSER----NVVSWTTMI-----SSNRDDAVSIFLNMRLDGVY 294
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN VT G+L A I+ G +IH L + G + G++ I MY+K +L+DA+
Sbjct: 295 PNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKA 354
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
F+ + + SWNAMI + ++G ++++F E M NE T SVL+A
Sbjct: 355 FDDITFREIISWNAMISGFAQNGFSHEALKMFLSATAETM-PNEYTFGSVLNA 406
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 8/164 (4%)
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
VT L G ++ G +IH G V +A++ MY K G +A +FE
Sbjct: 4 VTLCLALKACRGDLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIFENLV 63
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIEL--FERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+V SWN ++ G D+ I L RM G+ + T + LS C G
Sbjct: 64 DPDVVSWNTILS-----GFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLG 118
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
L++ +S + G++ + M RSG A + ++P
Sbjct: 119 LQL-QSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMP 161
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 169/550 (30%), Positives = 277/550 (50%), Gaps = 40/550 (7%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C L G Q+H + L + S + + L+ +Y+ C + +AR +FD +P
Sbjct: 164 CVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQS 223
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N ++ G EA F M + + TF+ L LL +K K++H
Sbjct: 224 DLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIH 283
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ DV + +ALID+Y KC + A++ D V T+MISGY K
Sbjct: 284 GYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNK 343
Query: 197 EAVVLFERMKLEGLEPNQFTYN-----------------------------------AII 221
EA+ F + E ++P T++ AI+
Sbjct: 344 EALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAIL 403
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ G + A F+R+T + D + WN+MI+ +Q+ R EA+ LF+ M + G +
Sbjct: 404 DMYAKCGRLDLACRVFNRITEK----DAICWNSMITSCSQNGRPGEAINLFRQMGMEGTR 459
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+ V+++G L A ++ G+EIH L+ + L D++ S+LIDMY+KCG+L +R +
Sbjct: 460 YDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRV 519
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ + KN SWN++I YG HG + + LF ML G++ + VT + ++SAC H G V
Sbjct: 520 FDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQV 579
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
++G+ + M E YG+ EHYACV DM R+GR+ EA++ + +P + G
Sbjct: 580 DEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLG 639
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C+IHG +LA + F++ +V+L+N+ A G+W + +R IMKE+ V+K
Sbjct: 640 ACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKV 699
Query: 522 PGFSRVEKRN 531
PG+S +E N
Sbjct: 700 PGYSWIEVNN 709
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 149/542 (27%), Positives = 241/542 (44%), Gaps = 65/542 (11%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFSLK------SKLVGVYAGCGDVNSARLVFDKIPNP 76
C K+++ GK VH +N+ LK S L+ +YA G ++ A+ +FD IP
Sbjct: 68 CCGLKSVKMGKIVH-----ETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQK 122
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ + N M+ G+ AI F MR + N TF+ VL C + G Q+H
Sbjct: 123 DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLH 182
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+A G E D V N L+ MYSKC L +AR++F + + D+VSW +ISGY +
Sbjct: 183 GIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMG 242
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
EA LF M G++P+ T+ +A+I
Sbjct: 243 EAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALI 302
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y + D A + + D V MISG+ + + EAL+ F+ ++ +K
Sbjct: 303 DIYFKCRDVEMA----QKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMK 358
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P +VT + + A ++ +G+E+H + + L GSA++DMY+KCG L A +
Sbjct: 359 PTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRV 418
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F K+ WN+MI ++G +I LF +M EG R + V++ LSAC++ +
Sbjct: 419 FNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPAL 478
Query: 402 EKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRM---VEAYDLLRQVPMYVTNSMA 456
G EI M + + + YA ++DM + G + +D +++ NS+
Sbjct: 479 HYGKEIHGLMIKG---PLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSII 535
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRKIMK 514
A+ N HG + + E G+ +PD L I C G+ E +M
Sbjct: 536 SAYGN----HGDLKECLALFHEMLRNGI-QPDHVTFLGIISACGHAGQVDEGIRYYHLMT 590
Query: 515 EK 516
E+
Sbjct: 591 EE 592
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 223/502 (44%), Gaps = 80/502 (15%)
Query: 56 VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFT 115
+Y G + A+ +F + NWM+ G F A+ ++ M +K+T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
F V+KAC GL +K GK VH MG + DV VG++LI +Y++ G L A+ +F +
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------ 217
++D V W M++GY A+ +F M+ ++PN T+
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 218 -----------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
N ++A Y++ AA F + DLV+WN +ISG+
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQS----DLVSWNGIISGYV 236
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q+ EA LF+GM+ +GIKP+++T L S++ +EIH + R + +DVF
Sbjct: 237 QNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVF 296
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
SALID+Y KC ++ A+ + + MI Y +G ++E F +++E
Sbjct: 297 LKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQER 356
Query: 381 MRANEVTLISVLSACS-----------HGGLVEKGLE----IFRSMKERYGVKISKEHYA 425
M+ VT S+ A + HG +++ L+ + ++ + Y K + A
Sbjct: 357 MKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYA-KCGRLDLA 415
Query: 426 CVV-------DMLC---------RSGRMVEAYDLLRQVPM----YVTNSMAGAFRNGCNI 465
C V D +C ++GR EA +L RQ+ M Y S++GA N+
Sbjct: 416 CRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANL 475
Query: 466 HGRRDLAVTMGEEFFEMGLRKP 487
A+ G+E + ++ P
Sbjct: 476 P-----ALHYGKEIHGLMIKGP 492
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 254/462 (54%), Gaps = 10/462 (2%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC-NKFTFSIVLKACVGLL 127
+F PNP+VFM N ++ + Q+++ F MR + + F+F+ ++KA L
Sbjct: 61 LFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLR 120
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
++ G Q+H A G + + VG LI MY +CG + AR+VF M E + ++W +M++
Sbjct: 121 SVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVT 180
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
C + LF+ M + N ++N ++A Y + G+ A F M +
Sbjct: 181 ACCRGGDMKGGRELFDLMPVR----NLMSWNVMLAGYTKAGELELAREMFLEMP----MK 232
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
D V+W+ MI GFA + EA F+ + G++PN ++TGVL A G+++ G+ +H
Sbjct: 233 DDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILH 292
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE-ITRIKNVASWNAMIGCYGKHGMV 366
+ + GL V +AL+D YSKCG++ A+ +FE I +N+ SW +M+ HG
Sbjct: 293 GFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHG 352
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
+ +I +F +M E G+R +E+ IS+L ACSH GLVE+G E F MK Y ++ S EHY C
Sbjct: 353 EEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGC 412
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
+VD+ R+G++ +AY+ + Q+P+ T + C++HG LA + E E+
Sbjct: 413 MVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNN 472
Query: 487 PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
V+LSN A G+W +A ++R+ M E+ + K PG+S +E
Sbjct: 473 SSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIE 514
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 162/344 (47%), Gaps = 14/344 (4%)
Query: 17 DCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+ ++ C + ++ G+++ L+ N+ S L G Y G++ AR +F ++P
Sbjct: 176 NAMVTACCRGGDMKGGRELFDLMPVR--NLMSWNVMLAG-YTKAGELELAREMFLEMPMK 232
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ + M++ A G F+EA +F ++ R N+ + + VL AC ++ GK +H
Sbjct: 233 DDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILH 292
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG-MFERDVVSWTSMISGYCNVSKV 195
+ G VSV NAL+D YSKCG + A+ VF M ER++VSWTSM++
Sbjct: 293 GFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHG 352
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA-EGFVPDLVTWNA 254
+EA+ +F +M+ G+ P++ + +++ + + G +F +M P + +
Sbjct: 353 EEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGC 412
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M+ + ++ + +A + M I + +L A + G +++ ++ + +
Sbjct: 413 MVDLYGRAGQLQKAYEFVCQM---PIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELD 469
Query: 315 LHIDVFTGSALIDMYSKCGSLKDA----RTLFEITRIKNVASWN 354
+ + L + Y+ G KDA R++ E RI W+
Sbjct: 470 PN-NSSDHVLLSNAYAVAGKWKDAASVRRSMTE-QRITKTPGWS 511
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 179/428 (41%), Gaps = 85/428 (19%)
Query: 27 KALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
+++R G Q+H AL+ D ++F + + L+ +Y CG V AR VFD++P PN N M
Sbjct: 120 RSVRVGIQLHCQALVHGLDTHLF-VGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAM 178
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
V A G+ + F LM V M +
Sbjct: 179 VTACCRGGDMKGGRELFDLM--------------------------------PVRNLMSW 206
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
N ++ Y+K G L AR +F M +D VSW++MI G+ + +EA F
Sbjct: 207 -------NVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRE 259
Query: 205 MKLEGLEPNQFTY-----------------------------------NAIIASYARRGD 229
++ +G+ PN+ + NA++ +Y++ G+
Sbjct: 260 LQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGN 319
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
A F R+ E ++V+W +M++ A EA+ +F M SGI+P+ +
Sbjct: 320 VLMAQLVFERIMNE---RNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFIS 376
Query: 290 VLQAGGLTGSIQIGREIHALVCRM-GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
+L A G ++ G E + M + + ++D+Y + G L+ A I
Sbjct: 377 LLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIP 436
Query: 349 NVA-SWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSACSHGGLVEKGLE 406
A W ++G HG V + ++ ER+ E + +++ L+S +A + G +
Sbjct: 437 CTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLS--NAYAVAGKWKDAAS 494
Query: 407 IFRSMKER 414
+ RSM E+
Sbjct: 495 VRRSMTEQ 502
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 169/395 (42%), Gaps = 33/395 (8%)
Query: 123 CVGLLDIKKG----KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS-----ARRVFHG 173
C+ LL+I K KQ+HA ++G E+D + L+ C + S A R+F
Sbjct: 8 CLSLLNICKSLTTFKQIHANVLKLGLESDPFIAGKLL---HHCAISLSDSLDYACRLFRY 64
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL-EPNQFTYNAIIASYARRGDSNA 232
DV ++I G + ++++ F M+ P+ F++ I+ + A
Sbjct: 65 TPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRV 124
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
+ G L +IS + + A K+F M +PN + ++
Sbjct: 125 GIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEM----PEPNAIAWNAMVT 180
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A G ++ GRE+ L+ L + + ++ Y+K G L+ AR +F +K+ S
Sbjct: 181 ACCRGGDMKGGRELFDLMPVRNL----MSWNVMLAGYTKAGELELAREMFLEMPMKDDVS 236
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
W+ MI + +G + + F + +GMR NE +L VLSAC+ G +E G +I
Sbjct: 237 WSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFG-KILHGFI 295
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV----PMYVTNSMAGAFRNGCNIHGR 468
E+ G+ ++D + G ++ A + ++ + SM A +HG
Sbjct: 296 EKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAAL----AMHGH 351
Query: 469 RDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADG 501
+ A+ + + E G+R PD F+ L C+ G
Sbjct: 352 GEEAIGIFHKMEESGIR-PDEIAFISLLYACSHAG 385
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 167/508 (32%), Positives = 275/508 (54%), Gaps = 15/508 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGD---VNSARLVFDKI 73
+L ++K+L + +Q HA + L + FS SKLV A + V+ A + ++I
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFS-ASKLVAFAATNPEPKTVSYAHSILNRI 100
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+PN F N ++ A A + + A+ F M +K++F+ VLKAC ++G+
Sbjct: 101 GSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGR 160
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H + + G DV V N L+++Y + G AR+V M RD VSW S++S Y
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
VDEA LF+ M+ E N ++N +I+ YA G A F M V D+V+WN
Sbjct: 221 LVDEARALFDEME----ERNVESWNFMISGYAAAGLVKEAKEVFDSMP----VRDVVSWN 272
Query: 254 AMISGFAQSKRENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
AM++ +A NE L++F ML S KP+ T+ VL A GS+ G +H + +
Sbjct: 273 AMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDK 332
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
G+ I+ F +AL+DMYSKCG + A +F T ++V++WN++I HG+ ++E+
Sbjct: 333 HGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEI 392
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F M+ EG + N +T I VLSAC+H G++++ ++F M Y V+ + EHY C+VD+L
Sbjct: 393 FSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLG 452
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
R G++ EA +L+ ++P + + + C G+ + A + E+ LR G+
Sbjct: 453 RMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQ 512
Query: 493 LSNICAADGEWHEAENLRKIMKEKNVQK 520
+SN+ A+DG W + + R+ M+ + V +
Sbjct: 513 MSNLYASDGRWEKVIDGRRNMRAERVNR 540
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 248/447 (55%), Gaps = 32/447 (7%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
++ +LK C + +G+ VH Q F +D+ + N L++MY+KCG L AR+VF M
Sbjct: 54 YNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMP 113
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA--RRG----- 228
ERD V+WT++ISGY + +A+VLF +M G PN+FT +++I + A RRG
Sbjct: 114 ERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQ 173
Query: 229 ----------DSNAAF--AFFSRMTAEGFVPDL------------VTWNAMISGFAQSKR 264
DSN A T G + D V+WNA+I+G A+
Sbjct: 174 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCG 233
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+AL+LF+GML G +P++ + + A TG ++ G+ +HA + + G + F G+
Sbjct: 234 TEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 293
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+DMY+K GS+ DAR +F+ ++V SWN+++ Y +HG + ++ FE M G+R N
Sbjct: 294 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPN 353
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
E++ +SVL+ACSH GL+++G + MK+ G+ + HY +VD+L R+G + A +
Sbjct: 354 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALRFI 412
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
++P+ T ++ A N C +H +L E FE+ P V+L NI A+ G W+
Sbjct: 413 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 472
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRN 531
+A +RK MKE V+K+P S VE N
Sbjct: 473 DAARVRKKMKESGVKKEPACSWVEIEN 499
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 221/465 (47%), Gaps = 62/465 (13%)
Query: 4 LIFPINNLSVNYL-------DCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVG 55
L FP N+L +Y+ + LL KC K L QG+ VH L + + + + L+
Sbjct: 35 LKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLN 94
Query: 56 VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNK 113
+YA CG + AR VFDK+P + + W + S ++ + + +A+ F+ M F + N+
Sbjct: 95 MYAKCGSLEEARKVFDKMPERD--FVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNE 152
Query: 114 FTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
FT S V+KA G Q+H + GF+++V VG+AL+D+Y++ GL+ A+ VF
Sbjct: 153 FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDA 212
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------- 217
+ R+ VSW ++I+G+ ++A+ LF+ M EG P+ F+Y
Sbjct: 213 LESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQG 272
Query: 218 -------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
N ++ YA+ G + A F R+ D+V+WN++++
Sbjct: 273 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTA 328
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
+AQ NEA+ F+ M GI+PN ++ VL A +G + G + L+ + G+ ++
Sbjct: 329 YAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLE 388
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS-WNAMIGCYGKHGMVD----SSIELF 373
+ ++D+ + G L A E I+ A+ W A++ H + ++ +F
Sbjct: 389 AWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVF 448
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
E L+ V L ++ ++ GG + + MKE GVK
Sbjct: 449 E--LDPDDPGPHVILYNIYAS---GGRWNDAARVRKKMKES-GVK 487
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 183/560 (32%), Positives = 280/560 (50%), Gaps = 56/560 (10%)
Query: 3 RLIFPINNLSVNYL-DCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCG 61
R +F N + Y+ +C LG +++ L+ D + S S L G YA G
Sbjct: 109 RDLFSWNVMLTGYVRNCRLG---------DARRLFDLMPEKD--VVSWNSLLSG-YAQNG 156
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLK 121
V+ AR VFD +P N N ++ A G +EA F +K + ++
Sbjct: 157 YVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE---------SKSDWDLISW 207
Query: 122 ACV--GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
C+ G + KK + +M + +S N +I Y++ G L ARR+F RDV
Sbjct: 208 NCLMGGFVRKKKLGDARWLFDKMPVRDAISW-NTMISGYAQGGGLSQARRLFDESPTRDV 266
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
+WT+M+SGY +DEA F+ M E N+ +YNA+IA Y + + A F
Sbjct: 267 FTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFES 322
Query: 240 M------------TAEGFVPDL---------------VTWNAMISGFAQSKRENEALKLF 272
M T G + D+ V+W A+I+G+AQS EAL +F
Sbjct: 323 MPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMF 382
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
+ G N T L ++++G++IH +MG F G+AL+ MY KC
Sbjct: 383 VEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKC 442
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
GS+ +A FE K+V SWN M+ Y +HG ++ +FE M G++ +E+T++ VL
Sbjct: 443 GSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVL 502
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
SACSH GL+++G E F SM + YGV + +HY C++D+L R+GR+ EA DL+R +P
Sbjct: 503 SACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPG 562
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
+ GA IHG +L E F+M + +V+LSN+ AA G W +A+ +R
Sbjct: 563 AASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSK 622
Query: 513 MKEKNVQKQPGFSRVEKRNE 532
M++ VQK PG+S VE +N+
Sbjct: 623 MRDIGVQKVPGYSWVEVQNK 642
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 174/376 (46%), Gaps = 33/376 (8%)
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
++ +P++ N + G+ A+ F+ M R + +++ ++ G L K
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMP----RRSSVSYNAMIS---GYLRNSK 95
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
+ QM E D+ N ++ Y + L ARR+F M E+DVVSW S++SGY
Sbjct: 96 FNLARNLFDQMP-ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQ 154
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
VDEA +F+ M E N ++N ++A+Y G A F + DL++
Sbjct: 155 NGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACLLFESKSDW----DLIS 206
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
WN ++ GF + K+ +A LF M V N ++G Q GGL+ + ++ E
Sbjct: 207 WNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR-- 264
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
DVFT +A++ Y + G L +A+T F+ KN S+NAMI Y + +D + E
Sbjct: 265 ------DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARE 318
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LFE M N + ++++ G + + + F M +R V +A ++
Sbjct: 319 LFESMPCR----NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVS-----WAAIIAGY 369
Query: 432 CRSGRMVEAYDLLRQV 447
+SG EA ++ ++
Sbjct: 370 AQSGHYEEALNMFVEI 385
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 131/310 (42%), Gaps = 62/310 (20%)
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
+P+ +N I+++ R G ++A F+ M V++NAMISG+ ++ + N A
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRS----SVSYNAMISGYLRNSKFNLARN 101
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
LF M + NV +TG ++ CR+G
Sbjct: 102 LFDQMPERDLFSWNVMLTGYVRN-----------------CRLG---------------- 128
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
DAR LF++ K+V SWN+++ Y ++G VD + E+F+ M E+ N ++
Sbjct: 129 ------DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNG 178
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY 450
+L+A H G +E+ +F S + + + C++ R ++ +A L ++P+
Sbjct: 179 LLAAYVHNGRIEEACLLFESKSDWDLIS-----WNCLMGGFVRKKKLGDARWLFDKMPVR 233
Query: 451 VT---NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAE 507
N+M + G + R L F E R + + + +G EA+
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRL-------FDESPTRDVFTWTAMVSGYVQNGMLDEAK 286
Query: 508 NLRKIMKEKN 517
M EKN
Sbjct: 287 TFFDEMPEKN 296
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 169/550 (30%), Positives = 279/550 (50%), Gaps = 47/550 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK-LVGVYAGCGDVNSARLVFDKIPNPN 77
+L C+ ++ G VHA + + S L+ +YA ++ + VF+ + N
Sbjct: 177 ILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVN 236
Query: 78 VFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
V ++W M + FT N + +A F M + TF V KA L D+ K K+V
Sbjct: 237 V--VSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE--RDVVSWTSMISGYCNVS 193
A ++G +++ VG ALIDM SKCG L AR +F+ F R W +MISGY
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSG 354
Query: 194 KVDEAVVLFERMKLEGLEPNQFTY------------------------------------ 217
++A+ LF +M + + +TY
Sbjct: 355 FNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSIS 414
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
NA+ +YA+ G F+RM DL++W ++++ ++Q ++A+++F M
Sbjct: 415 NAVANAYAKCGSLEDVRKVFNRMEDR----DLISWTSLVTAYSQCSEWDKAIEIFSNMRA 470
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
GI PN T + VL + ++ G+++H ++C++GL +D SAL+DMY+KCG L D
Sbjct: 471 EGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGD 530
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A+ +F + SW A+I + +HG+VD +++LF RM++ G+ N VT + VL ACSH
Sbjct: 531 AKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSH 590
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
GGLVE+GL+ F+ MK+ YG+ EHYAC+VD+L R G + +A + + ++P+ +
Sbjct: 591 GGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQ 650
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
C +HG +L ++ +V+LSN G + + +LR +MKE+
Sbjct: 651 TLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQG 710
Query: 518 VQKQPGFSRV 527
V+K+PG S +
Sbjct: 711 VKKEPGCSWI 720
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 147/546 (26%), Positives = 259/546 (47%), Gaps = 42/546 (7%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL---NIFSLKSKLVGVYAGCGDVNS 65
++L + L LL C+ ++ L+Q K VH L + + L + + Y+ C D+++
Sbjct: 64 SHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDA 123
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
A +FD++ N F ++ A G F + +F M+ ++F +S +L+ C+G
Sbjct: 124 ACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIG 183
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
L I+ G VHA GF + V AL++MY+K + + +VF+ M E +VVSW +M
Sbjct: 184 LDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAM 243
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA------------ 233
I+G+ + +A LF RM EG+ P+ T+ + + D N A
Sbjct: 244 ITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGV 303
Query: 234 -------FAFFSRMTAEG--------FVPDLVT------WNAMISGFAQSKRENEALKLF 272
A + G F +T WNAMISG+ +S +AL+LF
Sbjct: 304 DSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELF 363
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID-VFTGSALIDMYSK 331
M + I ++ T V A + +G+++HA + GL ++ V +A+ + Y+K
Sbjct: 364 AKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAK 423
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
CGSL+D R +F +++ SW +++ Y + D +IE+F M EG+ N+ T SV
Sbjct: 424 CGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSV 483
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
L +C++ L+E G ++ + + G+ + K + +VDM + G + +A + ++
Sbjct: 484 LVSCANLCLLEYGQQV-HGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNAD 542
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENL 509
T S A G HG D A+ + ++G+ +P+ L + C+ G E
Sbjct: 543 TVSWT-AIIAGHAQHGIVDDALQLFRRMVQLGV-EPNAVTFLCVLFACSHGGLVEEGLQY 600
Query: 510 RKIMKE 515
K+MK+
Sbjct: 601 FKLMKK 606
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 180/346 (52%), Gaps = 16/346 (4%)
Query: 27 KALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
K L GK+VHA + L N S+ + + YA CG + R VF+++ + + +++W
Sbjct: 389 KCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRD--LISWT 446
Query: 85 VMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
+ +A++ + +AI FS MR N+FTFS VL +C L ++ G+QVH + ++
Sbjct: 447 SLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKV 506
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G + D + +AL+DMY+KCG L A++VF+ + D VSWT++I+G+ VD+A+ LF
Sbjct: 507 GLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLF 566
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQ 261
RM G+EPN T+ ++ + + G +F M G VP++ + ++ ++
Sbjct: 567 RRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSR 626
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
N+A++ M V +PN + +L A + G++++G E+ A + T
Sbjct: 627 VGHLNDAMEFISRMPV---EPNEMVWQTLLGACRVHGNVELG-ELAAQKILSFKAENSAT 682
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNV-----ASWNAMIGCYGK 362
L + Y + GS KD +L + + + V SW ++ G K
Sbjct: 683 YVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHK 728
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 163/520 (31%), Positives = 263/520 (50%), Gaps = 34/520 (6%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+ S L+ +Y G + VF+K+ NV ++ G E + YFS M
Sbjct: 161 VSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSK 220
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ TF+I LKA + GK +H + GF+ V N L MY+KCG
Sbjct: 221 VGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVM 280
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS----- 223
R+F M DVVSWT++IS Y + + + AV F+RM+ + PN++T+ A+I+S
Sbjct: 281 RLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLA 340
Query: 224 YARRGD-----------------SNAAFAFFSR---MTAEGFV------PDLVTWNAMIS 257
A+ G+ +N+ +S+ + + V D+++W+ +IS
Sbjct: 341 AAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIIS 400
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
++Q EA M G KPN ++ VL G ++ G+++HA + +G+
Sbjct: 401 VYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDH 460
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
+ SA+I MYSKCGS+++A +F +I ++ SW AMI Y +HG +I LFE++
Sbjct: 461 EAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKIS 520
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
G++ + V I VL+AC+H G+V+ G F M Y + SKEHY C++D+LCR+GR+
Sbjct: 521 SVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRL 580
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
EA ++R +P + + + C +HG D E+ ++ + L+NI
Sbjct: 581 SEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIY 640
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRV---EKRNEFV 534
AA G W EA ++RK+MK K V K+ G+S V ++ N FV
Sbjct: 641 AAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNAFV 680
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 230/496 (46%), Gaps = 55/496 (11%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF--TGNFQEAIGYFS 102
N+ L S+L + G + AR +FDK+ + + ++W + + + + EA+ FS
Sbjct: 56 NMLELNSELKQLVKQ-GQLCKARYMFDKMTHRD--EISWTTLIAGYVNASDSYEALILFS 112
Query: 103 LMREFIY---RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYS 159
M +++ + ++F S+ LKAC ++I G+ +H + + G + V V +ALIDMY
Sbjct: 113 NM--WVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYM 170
Query: 160 KCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL------------ 207
K G + RVF M R+VVSWT++I+G + E ++ F M
Sbjct: 171 KVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAI 230
Query: 208 -----------------------EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEG 244
+G + + F N + Y + G + F +M
Sbjct: 231 ALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMR--- 287
Query: 245 FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
+PD+V+W +IS + Q E A++ FK M S + PN T V+ + + + G
Sbjct: 288 -MPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGE 346
Query: 305 EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE-ITRIKNVASWNAMIGCYGKH 363
+IH V R+GL + +++I +YSKCG LK A +F ITR K++ SW+ +I Y +
Sbjct: 347 QIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITR-KDIISWSTIISVYSQG 405
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
G + + M EG + NE L SVLS C L+E+G ++ + G+
Sbjct: 406 GYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLL-CIGIDHEAMV 464
Query: 424 YACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMG 483
++ ++ M + G + EA + + + S A NG HG A+ + E+ +G
Sbjct: 465 HSAIISMYSKCGSVQEASKIFNGMKINDIISWT-AMINGYAEHGYSQEAINLFEKISSVG 523
Query: 484 LRKPDGFVMLSNICAA 499
L KPD +VM + A
Sbjct: 524 L-KPD-YVMFIGVLTA 537
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 153/452 (33%), Positives = 251/452 (55%), Gaps = 40/452 (8%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+S +L C L +K+G+ +HA FE+D+ + N +++MY+KCG L A+ +F M
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------ 223
+D+VSWT +ISGY + EA+ LF +M G +PN+FT ++++ +
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQ 227
Query: 224 -----------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
YAR A F+ + A+ ++V+WNA+I+G A
Sbjct: 228 LHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK----NVVSWNALIAGHA 283
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
+ ++LF ML G +P + T + V A +GS++ G+ +HA V + G +
Sbjct: 284 RKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAY 343
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
G+ LIDMY+K GS+KDA+ +F +++ SWN++I Y +HG+ +++LFE+ML+
Sbjct: 344 IGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAK 403
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++ NE+T +SVL+ACSH GL+++G F MK ++ ++ H+ VVD+L R+GR+ EA
Sbjct: 404 VQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRLNEA 462
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
+ ++P+ T ++ GA C +H DL V E+ FE+ V+LSNI A+
Sbjct: 463 NKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASA 522
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
G +A +RK+MKE V+K+P S VE NE
Sbjct: 523 GRLSDAAKVRKMMKESGVKKEPACSWVEIENE 554
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 220/440 (50%), Gaps = 49/440 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L KC + L+QG+ +HA + ++ + L + ++ +YA CG + A+ +FDK+P +
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKD 170
Query: 78 VFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
M++W V+ S + +G EA+ F M ++ N+FT S +LKA G+Q+
Sbjct: 171 --MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQL 228
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA + + G++ +V VG++L+DMY++ + A+ +F+ + ++VVSW ++I+G+ +
Sbjct: 229 HAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEG 288
Query: 196 DEAVVLFERMKLEGLEPNQFTY-----------------------------------NAI 220
+ + LF +M +G EP FTY N +
Sbjct: 289 EHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTL 348
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I YA+ G A F R+ + D+V+WN++ISG+AQ EAL+LF+ ML + +
Sbjct: 349 IDMYAKSGSIKDAKKVFRRLVKQ----DIVSWNSIISGYAQHGLGAEALQLFEQMLKAKV 404
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+PN +T VL A +G + G+ L+ + + V ++D+ + G L +A
Sbjct: 405 QPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANK 464
Query: 341 LFEITRIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSACSHG 398
E IK A+ W A++G H +D + E++ E + + L+S + A +
Sbjct: 465 FIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASA-- 522
Query: 399 GLVEKGLEIFRSMKERYGVK 418
G + ++ + MKE GVK
Sbjct: 523 GRLSDAAKVRKMMKES-GVK 541
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 184/572 (32%), Positives = 288/572 (50%), Gaps = 55/572 (9%)
Query: 6 FPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKS-KLVGVYAGCGD-V 63
PI LS L L C +K Q+H L + L L + + V D V
Sbjct: 52 LPILKLSHPILRTLESCCGSTKEF---NQIHTQLIVSGLLQQPLAAGRAVKTLCSFPDSV 108
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC---NKFTFSIVL 120
A +F+ + P+ F+ N ++ + A+G++ + + +C N +TF +++
Sbjct: 109 QHAVSLFEGLEEPDAFICNTIMRTYVNVNDPYTALGFY--YEQMVRKCVAPNHYTFPLLV 166
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
K C + I G+++HA + GFE D+ V N+LI MYS CG + AR +F D+V
Sbjct: 167 KVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLV 226
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
+W SMI GY ++ A LFE M E + F++N++IA Y GD AA F++M
Sbjct: 227 TWNSMIDGYVKNGEIGAARELFEEMP----ERDLFSWNSMIAGYVGNGDMTAAEDLFNKM 282
Query: 241 TAEGFVPDLVTWNAMISGFAQS-------------------------------KRENEAL 269
D+V+WN MI G+AQ K +E L
Sbjct: 283 PFR----DIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECL 338
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV-CRMGLHIDVFTGSALIDM 328
++F M+ + PN T+ VL A G + G+ IH+ + + DV +AL+ M
Sbjct: 339 RMFDKMMGETM-PNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTM 397
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y+KCG++ AR +F+ ++V SWN+MI YG HG D ++E+F M + G N+ T
Sbjct: 398 YAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATF 457
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
I VLSAC+H G++ +G F M+ Y ++ EHY C+VD+L R+G M + +L+R++P
Sbjct: 458 ICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMP 517
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
M ++ GA + C H +LA + + E+ R +++LSNI AA+G+W + E
Sbjct: 518 MEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVEI 577
Query: 509 LRKIMKEKNVQKQPGFSRVE----KRNEFVEK 536
+RK+MKE+ + K GFS V FVEK
Sbjct: 578 VRKMMKERGLTKTTGFSWVHIEEFGTQSFVEK 609
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 285/549 (51%), Gaps = 44/549 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + G++VH + N ++F + L+ +Y+ G + ARL+FDKI N
Sbjct: 130 VLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNA-LIMMYSEVGSLALARLLFDKIENK 188
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V + M+ + +G EA+ M + ++ + L D+K GK +H
Sbjct: 189 DVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMH 248
Query: 137 AVATQMGF--ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
A + G ++ V + ALIDMY KC L ARRVF G+ + ++SWT+MI+ Y + +
Sbjct: 249 AYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNN 308
Query: 195 VDEAVVLFERMKLEGLEPNQ------------------------------FTYNAIIAS- 223
++E V LF +M EG+ PN+ FT + ++A+
Sbjct: 309 LNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATA 368
Query: 224 ----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
Y + GD +A + F ++ DL+ W+AMIS +AQ+ +EA +F M G
Sbjct: 369 FIDMYGKCGDVRSARSVFDSFKSK----DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCG 424
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I+PN T+ +L GS+++G+ IH+ + + G+ D+ ++ +DMY+ CG + A
Sbjct: 425 IRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAH 484
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
LF ++++ WNAMI + HG ++++ELFE M G+ N++T I L ACSH G
Sbjct: 485 RLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSG 544
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
L+++G +F M +G EHY C+VD+L R+G + EA++L++ +PM ++ G+F
Sbjct: 545 LLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSF 604
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C +H L ++F + K V++SNI A+ W + +R+ MK++ +
Sbjct: 605 LAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIV 664
Query: 520 KQPGFSRVE 528
K+PG S +E
Sbjct: 665 KEPGVSSIE 673
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 214/448 (47%), Gaps = 36/448 (8%)
Query: 96 EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALI 155
+A ++ MR + F VLKAC + G++VH + GF DV V NALI
Sbjct: 107 DAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALI 166
Query: 156 DMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF 215
MYS+ G L AR +F + +DVVSW++MI Y +DEA+ L M + ++P++
Sbjct: 167 MMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEI 226
Query: 216 TYNAIIASYARRGD---SNAAFAF-----------------------------FSRMTAE 243
+I A D A A+ ++R +
Sbjct: 227 GMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFD 286
Query: 244 GFV-PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI 302
G +++W AMI+ + NE ++LF ML G+ PN +T+ +++ G G++++
Sbjct: 287 GLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALEL 346
Query: 303 GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGK 362
G+ +HA R G + + +A IDMY KCG ++ AR++F+ + K++ W+AMI Y +
Sbjct: 347 GKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQ 406
Query: 363 HGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
+ +D + ++F M G+R NE T++S+L C+ G +E G I S ++ G+K
Sbjct: 407 NNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWI-HSYIDKQGIKGDMI 465
Query: 423 HYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM 482
VDM G + A+ L + SM A +G +HG + A+ + EE +
Sbjct: 466 LKTSFVDMYANCGDIDTAHRLFAEATDRDI-SMWNAMISGFAMHGHGEAALELFEEMEAL 524
Query: 483 GLRKPD-GFVMLSNICAADGEWHEAENL 509
G+ D F+ + C+ G E + L
Sbjct: 525 GVTPNDITFIGALHACSHSGLLQEGKRL 552
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 169/395 (42%), Gaps = 53/395 (13%)
Query: 8 INNLSVNYLDCLLGKCMKSKALRQGK--QVHALLCTNDLNIFSLKSKLVGVYAGCGDVNS 65
I ++ D LGK M + +R GK + LCT L+ +Y C ++
Sbjct: 231 ITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCT----------ALIDMYVKCENLAY 280
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
AR VFD + ++ M+ A N E + F M N+ T ++K C
Sbjct: 281 ARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGT 340
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
++ GK +HA + GF + + A IDMY KCG + SAR VF +D++ W++M
Sbjct: 341 AGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAM 400
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------------------- 217
IS Y + +DEA +F M G+ PN+ T
Sbjct: 401 ISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGI 460
Query: 218 -------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
+ + YA GD + A F+ T D+ WNAMISGFA AL+
Sbjct: 461 KGDMILKTSFVDMYANCGDIDTAHRLFAEATDR----DISMWNAMISGFAMHGHGEAALE 516
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMY 329
LF+ M G+ PN++T G L A +G +Q G+ + H +V G V ++D+
Sbjct: 517 LFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLL 576
Query: 330 SKCGSLKDARTLFEITRIK-NVASWNAMIGCYGKH 363
+ G L +A L + ++ N+A + + + H
Sbjct: 577 GRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLH 611
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 84/149 (56%)
Query: 243 EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI 302
E + + + +I+ + ++ +A K++ M + + +N + VL+A L S +
Sbjct: 83 ESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLL 142
Query: 303 GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGK 362
G+E+H V + G H DVF +ALI MYS+ GSL AR LF+ K+V SW+ MI Y +
Sbjct: 143 GQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDR 202
Query: 363 HGMVDSSIELFERMLEEGMRANEVTLISV 391
G++D +++L M ++ +E+ +IS+
Sbjct: 203 SGLLDEALDLLRDMHVMRVKPSEIGMISI 231
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 161/527 (30%), Positives = 276/527 (52%), Gaps = 42/527 (7%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVF 70
S Y++ + G + L +G+++HA + N + + + L+ +Y CG + AR VF
Sbjct: 207 STTYINVISGFSTP-EVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVF 265
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
DK+ ++ N M+ G+F EA+ + + ++ K TF +L AC + +
Sbjct: 266 DKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALA 325
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
+G+ VH+ + G +++V+V AL++MY+KCG L AR+VF+ M RD V+W+++I Y
Sbjct: 326 QGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAY- 384
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV 250
AS D+ A F R+ + D +
Sbjct: 385 -------------------------------ASNGYGKDARKARKVFDRLGSR----DTI 409
Query: 251 TWNAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
+WNAMI+ + Q+ A+K+F+ M +G+KP+ VT VL+A G + + +HA
Sbjct: 410 SWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQ 469
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
+ L +V + LI+MY++CGSL++A LF + K V SW AM+ + ++G +
Sbjct: 470 ISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEA 529
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
++LF+ M EG++ ++VT S+L C+HGG +E+G F M E + + + +H+A +VD
Sbjct: 530 LDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVD 589
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
+L RSGR+ +A +LL +P F C IHG+ +L E +E+
Sbjct: 590 LLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP 649
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEF 533
++ +SNI AA G W + ++RK M+E+ ++K PG S +E K +EF
Sbjct: 650 YIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEF 696
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 144/485 (29%), Positives = 216/485 (44%), Gaps = 91/485 (18%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+ TF VL +C D+ +G+ +H FE D VGNALI MY KC L AR VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 172 HGM--FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------ 217
M +R+VVSW +MI+ Y EA+VL+ RM L+GL + T+
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ 125
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
NA++ YAR G A F + D +WNA+I
Sbjct: 126 GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTR----DETSWNAVIL 181
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
+QS + AL++FK M +KPN+ T V+ + GR+IHA + G
Sbjct: 182 AHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDT 240
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
D+ +ALI+MY KCGS +AR +F+ + +++ SWN MIGCY +G ++EL++++
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLD 300
Query: 378 EEGMRANEVTLISVLSACS-----------HGGLVEKGLE-------------------- 406
EG + + T +S+L ACS H ++E+GL+
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLE 360
Query: 407 ----IFRSMKERYGVKISKEHYACVVDMLCRSGRMV-EAYDLLRQVPMYVTNSMAGAF-R 460
+F +MK R V S A + + R + +D L N+M + +
Sbjct: 361 EARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQ 420
Query: 461 NGCNIHGRRDLAVTMGEEFFEM----GLRKPDG--FVMLSNICAADGEWHEAENLRKIMK 514
NGC AV + F EM GL KPD F+ + CA+ G E + L +
Sbjct: 421 NGC--------AVAAMKIFREMTGAAGL-KPDAVTFIAVLEACASLGRLSEVKALHAQIS 471
Query: 515 EKNVQ 519
E ++
Sbjct: 472 ESELE 476
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 216/470 (45%), Gaps = 53/470 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALL-CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + +G+ +H + C+ + + L+ +Y C + AR VF+ +
Sbjct: 13 VLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQ 72
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+++W M +A+ G+ EA+ + M + TF VL AC L +G+++
Sbjct: 73 RNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL---AQGREI 129
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H G ++ S+ NAL+ MY++ G + A+R+F + RD SW ++I +
Sbjct: 130 HNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDW 189
Query: 196 DEAVVLFERMKLEGLEPNQFTY-----------------------------------NAI 220
A+ +F+ MK + ++PN TY A+
Sbjct: 190 SGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATAL 248
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I Y + G S+ A F +M D+V+WN MI + + +EAL+L++ + + G
Sbjct: 249 INMYGKCGSSHEAREVFDKMKKR----DMVSWNVMIGCYVLNGDFHEALELYQKLDMEGF 304
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
K T +L A ++ GR +H+ + GL +V +AL++MY+KCGSL++AR
Sbjct: 305 KRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARK 364
Query: 341 LFEITRIKNVASWNAMIGCYGKHGM---VDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+F + ++ +W+ +IG Y +G + ++F+R+ G R + ++ ++++
Sbjct: 365 VFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRL---GSR-DTISWNAMITTYVQ 420
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
G ++IFR M G+K + V++ GR+ E L Q+
Sbjct: 421 NGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQI 470
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+P+NVT VL + G + GR +H + D G+ALI MY KC SL DAR+
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 341 LFEIT--RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS-- 396
+FE R +NV SWNAMI Y ++G ++ L+ RM +G+ + VT +SVL ACS
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 397 ------HGGLVEKGLEIFRSM 411
H + GL+ F+S+
Sbjct: 124 AQGREIHNRVFYSGLDSFQSL 144
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 165/552 (29%), Positives = 275/552 (49%), Gaps = 64/552 (11%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
+ LL C L++G Q+H+ L ++ + ++ L+ +Y CGDV +A ++F+
Sbjct: 247 ISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGN 306
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NV + N +++A + ++ F M+ R N+FT+ +L+ C +I G+Q
Sbjct: 307 RTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQ 366
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H+++ + GFE+D+ V LIDMYSK G L ARRV + E+DVVSWTSMI+GY
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEY 426
Query: 195 VDEAVVLFERMKLEGLEPNQF-----------------------------------TYNA 219
+A+ F+ M+ G+ P+ +NA
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNA 486
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YAR G AF+ F + + D +TWN ++SGFAQS EALK+F M SG
Sbjct: 487 LVNLYARCGRIREAFSSFEEIEHK----DEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+K N T L A I+ G++IHA V + G + G+ALI +Y KCGS +DA+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
F +N SWN +I +HG +++ F++M +E
Sbjct: 603 MEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKE-------------------- 642
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
GL F+SM ++YG++ +HYACV+D+ R+G++ A + ++P+ +
Sbjct: 643 ----GLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTL 698
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ C +H ++ + E+ +V+LSN A G+W + +RK+M+++ V+
Sbjct: 699 LSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVR 758
Query: 520 KQPGFSRVEKRN 531
K+PG S +E +N
Sbjct: 759 KEPGRSWIEVKN 770
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 223/453 (49%), Gaps = 47/453 (10%)
Query: 34 QVHALLCTNDLNIFSLKSKLVG-----VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
++HA T L K ++VG +Y+ G V AR VF+++ + ++W+ M S
Sbjct: 63 EIHAKAITRGLG----KDRIVGNLLIDLYSKNGLVLPARRVFEELSARD--NVSWVAMLS 116
Query: 89 AFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
+ N +EA+ + M + S VL +C +G+ VHA + GF +
Sbjct: 117 GYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCS 176
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
+ VGNALI +Y +CG A RVF+ M RD V++ ++ISG+ + + A+ +FE M+
Sbjct: 177 ETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQ 236
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNA-----AFAFFSRMTA----EGFVPDL-------- 249
GL P+ T ++++A+ A GD ++ F + M++ EG + DL
Sbjct: 237 SSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVE 296
Query: 250 --------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
V WN ++ F Q ++ +LF M +GI+PN T +L+
Sbjct: 297 TALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCT 356
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
TG I +G +IH+L + G D++ LIDMYSK G L+ AR + E+ + K+V SW +
Sbjct: 357 CTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTS 416
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKER 414
MI Y +H ++ F+ M + G+ + + L S +S C+ + +GL+I R
Sbjct: 417 MIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSG 476
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
Y +S + +V++ R GR+ EA+ ++
Sbjct: 477 YSGDVSI--WNALVNLYARCGRIREAFSSFEEI 507
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 207/428 (48%), Gaps = 40/428 (9%)
Query: 16 LDCLLGKCMKSKALRQGKQVHAL-----LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
L +L C K++ QG+ VHA C+ + + L+ +Y CG A VF
Sbjct: 146 LSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETF----VGNALITLYLRCGSFRLAERVF 201
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+P+ + N ++ A + + A+ F M+ + T S +L AC L D++
Sbjct: 202 YDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQ 261
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
KG Q+H+ + G +D + +L+D+Y KCG + +A +F+ +VV W ++ +
Sbjct: 262 KGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFG 321
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL- 249
++ + ++ LF +M+ G+ PNQFTY I+ + G+ + S GF D+
Sbjct: 322 QINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMY 381
Query: 250 ------------------------------VTWNAMISGFAQSKRENEALKLFKGMLVSG 279
V+W +MI+G+ Q + +AL FK M G
Sbjct: 382 VSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCG 441
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I P+N+ + + +++ G +IHA V G DV +AL+++Y++CG +++A
Sbjct: 442 IWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAF 501
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+ FE K+ +WN ++ + + G+ + ++++F RM + G++ N T +S LSA ++
Sbjct: 502 SSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561
Query: 400 LVEKGLEI 407
+++G +I
Sbjct: 562 EIKQGKQI 569
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 181/366 (49%), Gaps = 43/366 (11%)
Query: 116 FSIVLKACVGLLDIKKGK------QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
F+ L+AC G G+ ++HA A G D VGN LID+YSK GL+ ARR
Sbjct: 44 FACALRACRG-----NGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARR 98
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR--- 226
VF + RD VSW +M+SGY +EA+ L+ +M G+ P + +++++S +
Sbjct: 99 VFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAEL 158
Query: 227 --RGDSNAAFAFFSRMTAEGFV------------------------P--DLVTWNAMISG 258
+G S A + +E FV P D VT+N +ISG
Sbjct: 159 FAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISG 218
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
AQ AL++F+ M SG+ P+ VT++ +L A G +Q G ++H+ + + G+ D
Sbjct: 219 HAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSD 278
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+L+D+Y KCG ++ A +F + NV WN ++ +G+ + S ELF +M
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQT 338
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
G+R N+ T +L C+ G ++ G +I S+ + G + ++DM + G +
Sbjct: 339 AGIRPNQFTYPCILRTCTCTGEIDLGEQI-HSLSVKTGFESDMYVSGVLIDMYSKYGWLE 397
Query: 439 EAYDLL 444
+A +L
Sbjct: 398 KARRVL 403
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 260/486 (53%), Gaps = 40/486 (8%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ L+ VYA GD+ AR V D++P N +V GN +EA+ +S M R
Sbjct: 316 TALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCR 375
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N FS VL AC L D++ G+++H +M N+V V +ALIDMY KC L A+ +
Sbjct: 376 PNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMI 435
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F+ + ++++V W S+ISGY N SK+ E
Sbjct: 436 FYSLPQKNIVCWNSLISGYSNNSKMVE--------------------------------- 462
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
A F +M A ++ +WN++ISG+AQ+++ +ALK F ML SG P +T + V
Sbjct: 463 --AEELFKKMPAR----NVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSV 516
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A S+++G+ +HA + ++G+ +F G+AL DMY+K G L ++ +F +N
Sbjct: 517 LLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRND 576
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+W AMI ++G + SI LFE M+ G+ NE T +++L ACSH GLVE + F
Sbjct: 577 VAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFE- 635
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M + G+ +HY C+VD+L R+G + EA DLL ++ + A + CNI+ ++
Sbjct: 636 MMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKE 695
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+ + E+ G+V+LSN+ A+ G+W +A +R +MK N++K G S V+ R
Sbjct: 696 MGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIR 755
Query: 531 NEFVEK 536
+E ++K
Sbjct: 756 DEQLQK 761
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 166/356 (46%), Gaps = 44/356 (12%)
Query: 19 LLGKCMKSKALRQGKQVH----ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
+LG C + LR G+++H + C+N N+F + S L+ +Y C + A+++F +P
Sbjct: 384 VLGACASLQDLRSGRKIHNQTLKMACSN--NVF-VSSALIDMYCKCKQLPDAQMIFYSLP 440
Query: 75 NPNVFMLNWMV------------------MASAFTGNFQEAIGYFSLMREFIYRCNKF-- 114
N+ N ++ M + ++ I ++ R+FI F
Sbjct: 441 QKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHA 500
Query: 115 -----------TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
TFS VL AC L ++ GK VHA ++G + + VG AL DMY+K G
Sbjct: 501 MLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGD 560
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
L S++RVF+ M +R+ V+WT+MI G +E+++LFE M G+ PN+ T+ AI+ +
Sbjct: 561 LDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFA 620
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ G A +F M A G P + M+ A++ EA L +L K
Sbjct: 621 CSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDL---LLKIESKSE 677
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI-DMYSKCGSLKDA 338
+ +L A + + ++G + L D G L+ +MY+ CG KDA
Sbjct: 678 ANSWAALLSACNIYRNKEMGERAAKRL--QELDKDNTAGYVLLSNMYASCGKWKDA 731
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 191/459 (41%), Gaps = 103/459 (22%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA------------------------- 87
+V + GD+ SAR +FD +P +V MV A
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFF 213
Query: 88 SAFTGNF------QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
+A F ++A+G F M N+ T V+KAC+G + + +A +
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMK 273
Query: 142 MGF-ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ ++ V N+LI +Y + G +ARR+F M RDVVSWT+++ Y + ++ A
Sbjct: 274 SNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARR 333
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
+ + M E N+ ++ ++A + ++G++ A + +S+M A+
Sbjct: 334 VLDEMP----ERNEVSWGTLVARHEQKGNAKEAVSLYSQMLAD----------------- 372
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
G +PN + VL A ++ GR+IH +M +VF
Sbjct: 373 ------------------GCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVF 414
Query: 321 TGSALIDMYSKCGSLKDAR-------------------------------TLFEITRIKN 349
SALIDMY KC L DA+ LF+ +N
Sbjct: 415 VSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARN 474
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
VASWN++I Y ++ +++ F ML G E+T SVL AC+ +E G ++
Sbjct: 475 VASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMG-KMVH 533
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ + G+K S + DM +SG + + + ++P
Sbjct: 534 AKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMP 572
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 168/541 (31%), Positives = 273/541 (50%), Gaps = 49/541 (9%)
Query: 28 ALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
A++ G H +C L+ Y G + +AR VF ++ + + N M+M
Sbjct: 161 AIKFGLDTHVFVCNT----------LLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMG 210
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ G +A+ F+ MR FTFS +L G+ + G QVHA+ + +
Sbjct: 211 CSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLN 270
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V V N+L+D YSKC L RR+F M ERD VS+ +I+ Y + LF M+
Sbjct: 271 VFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQK 330
Query: 208 EGLEPNQFTY-----------------------------------NAIIASYARRGDSNA 232
G + Y NA+I Y++ G +A
Sbjct: 331 LGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDA 390
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
A + FS + + ++W A+I+G+ Q+ + EAL+LF M +G++P+ T + +++
Sbjct: 391 AKSNFSNRSEKS----AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIK 446
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A I +GR++H+ + R G VF+GS L+DMY+KCG L +A F+ +N S
Sbjct: 447 ASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSIS 506
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
WNA+I Y +G ++I++FE ML G + VT +SVL+ACSH GL ++ ++ F MK
Sbjct: 507 WNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMK 566
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLA 472
+Y + KEHYACV+D L R G + +L ++P + + + C IHG ++LA
Sbjct: 567 HQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELA 626
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
++ F M +V+LSNI A G+W +A ++KIM+++ V+K+ G+S VE + +
Sbjct: 627 RVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQK 686
Query: 533 F 533
Sbjct: 687 I 687
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 231/508 (45%), Gaps = 48/508 (9%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
NIFSL + ++ Y+ GD+ +A+ +F P+ N M+ A A G +A+ F M
Sbjct: 73 NIFSL-NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
++ T + VL L +H A + G + V V N L+D Y K GLL
Sbjct: 132 LGEGVIPDRVTVTTVLN-----LPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 186
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
+ARRVF M ++D V++ +M+ G +A+ LF M+ G+ FT+++I+
Sbjct: 187 AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVA 246
Query: 225 A---------------RRGDS-------NAAFAFFS---------RMTAEGFVPDLVTWN 253
A R S N+ F+S R+ E D V++N
Sbjct: 247 AGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYN 306
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
+I+ +A ++ L+LF+ M G + +L G + IG++IHA + +
Sbjct: 307 VIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLL 366
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
GL + G+ALIDMYSKCG L A++ F K+ SW A+I Y ++G + +++LF
Sbjct: 367 GLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLF 426
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
M G+R + T S++ A S ++ G ++ S R G K S + +VDM +
Sbjct: 427 SDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQL-HSYLIRSGYKSSVFSGSVLVDMYAK 485
Query: 434 SGRMVEAYDLLRQVPMYVT---NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGF 490
G + EA ++P + N++ A+ + +G A+ M E G PD
Sbjct: 486 CGCLDEALRTFDEMPERNSISWNAVISAYAH----YGEAKNAIKMFEGMLHCGF-NPDSV 540
Query: 491 VMLSNI--CAADGEWHEAENLRKIMKEK 516
LS + C+ +G E +MK +
Sbjct: 541 TFLSVLAACSHNGLADECMKYFHLMKHQ 568
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
H ++F+ + ++ YS G L A+ LF + +N +W M+ + G ++ LF
Sbjct: 71 HKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRA 130
Query: 376 MLEEGMRANEVTLISVLS 393
ML EG+ + VT+ +VL+
Sbjct: 131 MLGEGVIPDRVTVTTVLN 148
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 171/550 (31%), Positives = 280/550 (50%), Gaps = 47/550 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLC----TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
LL + L++ Q+H+ + + L +F+ LV Y ++ A +F ++P
Sbjct: 149 LLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFN---SLVDSYCKTCCLDIASQLFSEMP 205
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ N M+ G +EA+ F MR ++ + FTF+ +L VG D+ G+Q
Sbjct: 206 TKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQ 265
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H +A + + D+ V NAL+D YSK + A+ +F M E D VS+ +I+GY +
Sbjct: 266 IHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQ 325
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
+++ LF+R++ + F + NA
Sbjct: 326 YEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNA 385
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YA+ A F+ + VP W A+IS + Q EALK+FK M
Sbjct: 386 LVDMYAKCEKFEDANRIFANLAYRNSVP----WTAIISIYVQKGFHEEALKMFKEMNREN 441
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ + T L+A S+ +G+++H+ V R+GL VF+GS L+DMY+ CGS+KDA
Sbjct: 442 VHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAI 501
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ +N+ WNA+I Y ++G +++ F M+E G+ + V+ +SVL+ACSH G
Sbjct: 502 EVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRG 561
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVEK L F SM + Y + ++HYA ++D+LCRSGR EA +L+ ++P M +
Sbjct: 562 LVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSV 621
Query: 460 RNGCNIHGRRDLAVTMGEEFFEM-GLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
N C IH +DLA ++ F+M LR +V +SNI A G+W A ++K M+E+ V
Sbjct: 622 LNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGV 681
Query: 519 QKQPGFSRVE 528
+K +S VE
Sbjct: 682 KKVTAYSWVE 691
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 222/482 (46%), Gaps = 44/482 (9%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYR 110
+V Y ++ AR +F+ + + N ++W +M ++ N Q EA ++ M +
Sbjct: 83 MVSGYVKSRNLFRARELFESMFSRN--EVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ TF+ +L +K+ Q+H+ + GF + V N+L+D Y K L A ++
Sbjct: 141 PDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQL 200
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD- 229
F M +D VS+ MI+GY +EA+ LF +M+ +P+ FT+ A++ D
Sbjct: 201 FSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDV 260
Query: 230 ---------------------SNAAFAFFSR-----MTAEGF--VPDL--VTWNAMISGF 259
+NA F+S+ + F +P+L V++N +I+G+
Sbjct: 261 IFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGY 320
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
A + + ++ LFK + + N +L + ++ +GR+ HA +V
Sbjct: 321 AWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEV 380
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
G+AL+DMY+KC +DA +F +N W A+I Y + G + ++++F+ M E
Sbjct: 381 QVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRE 440
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
+ ++ T S L A ++ V G ++ S+ R G+ S + +VDM G M +
Sbjct: 441 NVHGDQATFASTLKASANLASVSLGKQLHSSVI-RLGLLSSVFSGSVLVDMYANCGSMKD 499
Query: 440 AYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
A ++ +++P + N++ A+ +G + + + E GL PD LS +
Sbjct: 500 AIEVFKEMPDRNIVCWNALISAYSQ----NGDAEATFSSFADMIESGLY-PDSVSFLSVL 554
Query: 497 CA 498
A
Sbjct: 555 TA 556
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 132/296 (44%), Gaps = 43/296 (14%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
F+ LK V I K +Q+ +M + N SV N ++ Y K L AR +F MF
Sbjct: 49 FNFKLKDLVRANQIAKARQLF---DEMPYRNTSSV-NMMVSGYVKSRNLFRARELFESMF 104
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT------------------- 216
R+ VSWT MI GY ++ EA L+ M G++P+ T
Sbjct: 105 SRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQ 164
Query: 217 ----------------YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
+N+++ SY + + A FS M + D V++N MI+G+
Sbjct: 165 IHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTK----DSVSFNVMITGYT 220
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
+ EALKLF M +P+ T +L + + G++IH L + D+F
Sbjct: 221 KYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIF 280
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+AL+D YSK + A+ LF+ + S+N +I Y +G + S +LF+R+
Sbjct: 281 VANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRL 336
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 39/258 (15%)
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
V A + GF+ ++S N + + + AR++F M R+ S M+SGY
Sbjct: 33 VDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRN 92
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
+ A LFE M FSR + V+W
Sbjct: 93 LFRARELFESM-------------------------------FSR--------NEVSWTI 113
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MI G++Q+ + EA L+ M SG+KP+++T +L T +++ +IH+ + R G
Sbjct: 114 MIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFG 173
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+ ++L+D Y K L A LF K+ S+N MI Y K+G + +++LF
Sbjct: 174 FSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFM 233
Query: 375 RMLEEGMRANEVTLISVL 392
+M + + T ++L
Sbjct: 234 QMRNMDFQPSGFTFAAML 251
>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32430, mitochondrial; Flags: Precursor
gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 285/551 (51%), Gaps = 55/551 (9%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C+ S+ G Q+ + + L + + + + +Y+ G AR VFD++ +
Sbjct: 181 LSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKD- 239
Query: 79 FMLNWMVMASAF----TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
M++W + S T F+ + + +MRE + + +F+ V+ C D+K +Q
Sbjct: 240 -MISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV-ELDHVSFTSVITTCCHETDLKLARQ 297
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + + G+E+ + VGN L+ YSKCG+L + + VFH M ER+VVSWT+MIS S
Sbjct: 298 IHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SN 352
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
D+AV +F M+ +G+ PN+ T+ N+
Sbjct: 353 KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNS 412
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
I YA+ A F +T ++++WNAMISGFAQ+ +EALK+F
Sbjct: 413 FITLYAKFEALEDAKKAFEDIT----FREIISWNAMISGFAQNGFSHEALKMFLSAAAET 468
Query: 280 IKPNNVTVTGVLQAGGLTGSIQI--GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
+ PN T VL A I + G+ HA + ++GL+ SAL+DMY+K G++ +
Sbjct: 469 M-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDE 527
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+ +F KN W ++I Y HG ++ + LF +M++E + + VT +SVL+AC+
Sbjct: 528 SEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNR 587
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
G+V+KG EIF M E Y ++ S EHY+C+VDML R+GR+ EA +L+ +VP SM
Sbjct: 588 KGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQ 647
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
+ C +HG + + E EM +V + NI A EW +A +RK M++KN
Sbjct: 648 SMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKN 707
Query: 518 VQKQPGFSRVE 528
V K+ GFS ++
Sbjct: 708 VSKEAGFSWID 718
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 197/413 (47%), Gaps = 54/413 (13%)
Query: 23 CMKSKA----LRQGKQVHALLCTNDLNIFSLKSKLV-GVYAGCGDVNSARLVFDKIPNPN 77
C+ KA L++G Q+H T+ F S V G+Y G ++A +F+ + +P+
Sbjct: 82 CLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 141
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V ++W + S F N Q A+ + M+ + FT+S L CVG G Q+ +
Sbjct: 142 V--VSWNTILSGFDDN-QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQS 198
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD- 196
+ G E+D+ VGN+ I MYS+ G ARRVF M +D++SW S++SG
Sbjct: 199 TVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGF 258
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
EAVV+F M EG+E + ++ ++I +
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 318
Query: 224 --YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y++ G A + F +M+ ++V+W MI S +++A+ +F M G+
Sbjct: 319 SRYSKCGVLEAVKSVFHQMSER----NVVSWTTMI-----SSNKDDAVSIFLNMRFDGVY 369
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN VT G++ A I+ G +IH L + G + G++ I +Y+K +L+DA+
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
FE + + SWNAMI + ++G ++++F E M NE T SVL+A
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNA 481
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 260 AQSKRENE---ALKLFKGMLVSGIKPNNVT-VTGVLQAGGLTGSIQIGREIHALVCRMGL 315
++S R N AL +FK L G ++ VT L G ++ G +IH G
Sbjct: 48 SESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACRGDLKRGCQIHGFSTTSGF 107
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL--F 373
V +A++ MY K G +A +FE +V SWN ++ G D+ I L
Sbjct: 108 TSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILS-----GFDDNQIALNFV 162
Query: 374 ERMLEEGMRANEVTLISVLSAC 395
RM G+ + T + LS C
Sbjct: 163 VRMKSAGVVFDAFTYSTALSFC 184
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 279/529 (52%), Gaps = 46/529 (8%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVF 70
S Y++ + G + L +G+++HA + N + + + L+ +Y CG + AR VF
Sbjct: 207 STTYINVISGFSTP-EVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVF 265
Query: 71 DKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
DK+ + M++W VM + G+F EA+ + + ++ K TF +L AC +
Sbjct: 266 DKMKKRD--MVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKA 323
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
+ +G+ VH+ + G +++V+V AL++MY+KCG L AR+VF+ M RD V+W+++I
Sbjct: 324 LAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGA 383
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
Y AS D+ A F R+ + D
Sbjct: 384 Y--------------------------------ASNGYGKDARKARKVFDRLGSR----D 407
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
+ WNAMI+ + Q+ A+K+F+ M +G+KP+ VT VL+A G + + +H
Sbjct: 408 TICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALH 467
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
A + L +V + LI+MY++CGSL++A LF + K V SW AM+ + ++G
Sbjct: 468 AQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYA 527
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+++LF+ M EG++ ++VT S+L C+HGG +E+G F M E +G+ + +H+A +
Sbjct: 528 EALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAM 587
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
VD+L RSGR+ +A +LL +P F C IHG+ +L E +E+
Sbjct: 588 VDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSST 647
Query: 488 DGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEF 533
++ +SNI AA G W + ++RK M+E+ ++K PG S +E K +EF
Sbjct: 648 APYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEF 696
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 144/485 (29%), Positives = 217/485 (44%), Gaps = 91/485 (18%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+ TF VL +C D+ +G+ +H FE D VGNALI MY KC L AR VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 172 HGM--FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------ 217
M +R+VVSW +MI+ Y EA+VL+ RM L+GL + T+
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ 125
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
NA++ YAR G A F + D +WNA+I
Sbjct: 126 GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTR----DETSWNAVIL 181
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
+QS + AL++FK M +KPN+ T V+ + GR+IHA + G
Sbjct: 182 AHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDS 240
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
D+ +ALI+MY KCGS +AR +F+ + +++ SWN MIGCY ++G ++EL++++
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLD 300
Query: 378 EEGMRANEVTLISVLSACS-----------HGGLVEKGLE-------------------- 406
EG + + T +S+L ACS H ++E+GL+
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLE 360
Query: 407 ----IFRSMKERYGVKISKEHYACVVDMLCRSGRMV-EAYDLLRQVPMYVTNSMAGAF-R 460
+F +MK R V S A + + R + +D L N+M + +
Sbjct: 361 EARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQ 420
Query: 461 NGCNIHGRRDLAVTMGEEFFEM----GLRKPDG--FVMLSNICAADGEWHEAENLRKIMK 514
NGC AV + F EM GL KPD F+ + CA+ G E + L +
Sbjct: 421 NGC--------AVAAMKIFREMTGAAGL-KPDAVTFIAVLEACASLGRLSEVKALHAQIS 471
Query: 515 EKNVQ 519
E ++
Sbjct: 472 ESELE 476
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 216/470 (45%), Gaps = 53/470 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALL-CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + +G+ +H + C+ + + L+ +Y C + AR VF+ +
Sbjct: 13 VLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQ 72
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+++W M +A+ G+ EA+ + M + TF VL AC L +G+++
Sbjct: 73 RNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL---AQGREI 129
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H G ++ S+ NAL+ MY++ G + A+R+F + RD SW ++I +
Sbjct: 130 HNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDW 189
Query: 196 DEAVVLFERMKLEGLEPNQFTY-----------------------------------NAI 220
A+ +F+ MK + ++PN TY A+
Sbjct: 190 SGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATAL 248
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I Y + G S+ A F +M D+V+WN MI + Q+ +EAL+L++ + + G
Sbjct: 249 INMYGKCGSSHEAREVFDKMKKR----DMVSWNVMIGCYVQNGDFHEALELYQKLDMEGF 304
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
K T +L A ++ GR +H+ + GL +V +AL++MY+KCGSL++AR
Sbjct: 305 KRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARK 364
Query: 341 LFEITRIKNVASWNAMIGCYGKHGM---VDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+F + ++ +W+ +IG Y +G + ++F+R+ G R + + ++++
Sbjct: 365 VFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRL---GSR-DTICWNAMITTYVQ 420
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
G ++IFR M G+K + V++ GR+ E L Q+
Sbjct: 421 NGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQI 470
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+P+NVT VL + G + GR +H + D G+ALI MY KC SL DAR+
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 341 LFEIT--RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS-- 396
+FE R +NV SWNAMI Y ++G ++ L+ RM +G+ + VT +SVL ACS
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 397 ------HGGLVEKGLEIFRSM 411
H + GL+ F+S+
Sbjct: 124 AQGREIHNRVFYSGLDSFQSL 144
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 161/517 (31%), Positives = 279/517 (53%), Gaps = 46/517 (8%)
Query: 29 LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
+ Q KQ+HA N L+ L KL+ + D+ A +FD+IP P+V++ N +
Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKLLQL----PDLPYACTLFDQIPKPSVYLYNKFIQT 56
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ G+ + M N+++F+ + AC L ++ G+ +H+ + GF +D
Sbjct: 57 FSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASD 116
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
+ AL+DMY+K G+L SAR++F M RD+ +W
Sbjct: 117 MFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTW------------------------- 151
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
N++IA YAR G AA F++M V ++++W A+ISG+AQ+ + +
Sbjct: 152 ----------NSLIAGYARSGHMEAALELFNKMP----VRNVISWTALISGYAQNGKYAK 197
Query: 268 ALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
AL++F G+ G KPN V++ VL A G++ IG+ I A G + + +A++
Sbjct: 198 ALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVL 257
Query: 327 DMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
+++++CG++++A+ +F EI +N+ SWN MI HG +++L+++ML MR ++
Sbjct: 258 ELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDD 317
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
VT + +L AC+HGG+V +G ++F SM+ ++ V EHY C+VD+L R+G + EAY+L++
Sbjct: 318 VTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQ 377
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
+PM + + G C+ HG +L E F++ P +V+LSNI A G+W
Sbjct: 378 NMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSG 437
Query: 506 AENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
LRK+MK ++ K+ G+S +E + E V++ S
Sbjct: 438 VARLRKMMKGGHITKRAGYSYIEVGDGIHEFIVEDRS 474
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 158/503 (31%), Positives = 273/503 (54%), Gaps = 46/503 (9%)
Query: 29 LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
+ Q KQ+HA N L+ L KL+ + D+ A +FD+IP P+V++ N +
Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKLLQL----PDLPYACTLFDQIPKPSVYLYNKFIQT 56
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ G+ + M N+++F+ + AC L ++ G+ +H+ + GF +D
Sbjct: 57 FSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASD 116
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
+ AL+DMY+K G+L SAR++F M RD+ +W
Sbjct: 117 MFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTW------------------------- 151
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
N++IA YAR G AA F++M V ++++W A+ISG+AQ+ + +
Sbjct: 152 ----------NSLIAGYARSGHMEAALELFNKMP----VRNVISWTALISGYAQNGKYAK 197
Query: 268 ALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
AL++F G+ G KPN V++ VL A G++ IG+ I A G + + +A++
Sbjct: 198 ALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVL 257
Query: 327 DMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
+++++CG++++A+ +F EI +N+ SWN MI HG +++L+++ML MR ++
Sbjct: 258 ELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDD 317
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
VT + +L AC+HGG+V +G ++F SM+ ++ V EHY C+VD+L R+G + EAY+L++
Sbjct: 318 VTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQ 377
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
+PM + + G C+ HG +L E F++ P +V+LSNI A G+W
Sbjct: 378 NMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSG 437
Query: 506 AENLRKIMKEKNVQKQPGFSRVE 528
LRK+MK ++ K+ G+S +E
Sbjct: 438 VARLRKMMKGGHITKRAGYSYIE 460
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 166/545 (30%), Positives = 282/545 (51%), Gaps = 39/545 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
+L C AL+ G+ VH + ++ ++ ++A CG V AR +F+++P+ ++
Sbjct: 139 VLKACSSLHALQLGRWVHETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDL 198
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
++ + + G EA+ F MR + + +L AC L +K G +
Sbjct: 199 ASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVC 258
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
A + GFE+D+ V NA+IDMY KCG A RVF M DVVSW+++I+GY E+
Sbjct: 259 AVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQES 318
Query: 199 VVLFERM--------------------KLEGLEPNQFTYN---------------AIIAS 223
L+ M KLE L+ + +N A+I
Sbjct: 319 YKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVM 378
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
YA G A + F + + D++ WN+MI G+ A F+ + + +PN
Sbjct: 379 YANCGSIKEAESIFECTSDK----DIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPN 434
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+TV +L G+++ G+EIH V + GL ++V G++LIDMYSKCG L+ +F+
Sbjct: 435 FITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFK 494
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
++NV ++N MI G HG + + +E+M EEG R N+VT IS+LSACSH GL+++
Sbjct: 495 QMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDR 554
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
G ++ SM YG++ + EHY+C+VD++ R+G + AY + ++PM ++ G+ C
Sbjct: 555 GWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGAC 614
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
+H + +L + E ++ +V+LSN+ A+ W + +R ++K+K ++K+PG
Sbjct: 615 RLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPG 674
Query: 524 FSRVE 528
S ++
Sbjct: 675 SSWIQ 679
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 159/541 (29%), Positives = 264/541 (48%), Gaps = 61/541 (11%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIF--------SLKSKLVGVYAGC 60
++L +++ + L + + +HALL L F S S+LV VY
Sbjct: 23 HSLPIHFTVTSFHRLKSPPNLHEARTLHALLLV--LGFFQPTCPHSSSFASQLVNVYVNF 80
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
G + A L F +P+ + N ++ G+F +AI ++ M + + +T+ +VL
Sbjct: 81 GSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVL 140
Query: 121 KACVGLLDIKKGKQVHAVATQMG-FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
KAC L ++ G+ VH T G + +V V A+IDM++KCG + ARR+F M +RD+
Sbjct: 141 KACSSLHALQLGRWVH--ETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDL 198
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ------------------------- 214
SWT++I G + EA++LF +M+ EGL P+
Sbjct: 199 ASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVC 258
Query: 215 ----------FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
+ NA+I Y + GD A FS M D+V+W+ +I+G++Q+
Sbjct: 259 AVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYS----DVVSWSTLIAGYSQNCL 314
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
E+ KL+ GM+ G+ N + T VL A G ++ G+E+H V + GL DV GSA
Sbjct: 315 YQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSA 374
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
LI MY+ CGS+K+A ++FE T K++ WN+MI Y G +S+ F R+ R N
Sbjct: 375 LIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPN 434
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSM-KERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
+T++S+L C+ G + +G EI + K G+ +S + ++DM + G + +
Sbjct: 435 FITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGN--SLIDMYSKCGFLELGEKV 492
Query: 444 LRQVPMYVTN-SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAAD 500
+Q M V N + + C HG+ + + E+ E G +P+ F+ L + C+
Sbjct: 493 FKQ--MMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEG-NRPNKVTFISLLSACSHA 549
Query: 501 G 501
G
Sbjct: 550 G 550
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 153/467 (32%), Positives = 259/467 (55%), Gaps = 9/467 (1%)
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
+N A F + NPNV + N ++ ++A+ ++ M ++FS ++KA
Sbjct: 26 INLAASAFANVQNPNVLVFNALIRGCVHCCYSEQALVHYMHMLRNNVMPTSYSFSSLIKA 85
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C L+D G+ VH + GF++ V V LI+ YS G + +RRVF M ERDV +W
Sbjct: 86 CTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGDVGGSRRVFDDMPERDVFAW 145
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA 242
T+MIS + + A LF+ M E N T+NA+I Y + G++ +A F++M A
Sbjct: 146 TTMISAHVRDGDMASAGRLFDEMP----EKNVATWNAMIDGYGKLGNAESAEFLFNQMPA 201
Query: 243 EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI 302
D+++W M++ ++++KR E + LF ++ G+ P+ VT+T V+ A G++ +
Sbjct: 202 R----DIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALAL 257
Query: 303 GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGK 362
G+E+H + G +DV+ GS+LIDMY+KCGS+ A +F + KN+ WN +I
Sbjct: 258 GKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLAT 317
Query: 363 HGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
HG V+ ++ +F M + +R N VT IS+L+AC+H G +E+G F SM + Y + E
Sbjct: 318 HGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVE 377
Query: 423 HYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM 482
HY C+VD+L ++G + +A +++R + + + + GA NGC +H ++A + +
Sbjct: 378 HYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVL 437
Query: 483 GLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ-PGFSRVE 528
+ +L N+ A + W+E +R MK+ V+K+ PG S VE
Sbjct: 438 EPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWVE 484
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 260/486 (53%), Gaps = 40/486 (8%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ L+ VYA GD+ AR V D++P N +V GN +EA+ +S M R
Sbjct: 316 TALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCR 375
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N FS VL AC L D++ G+++H +M N+V V +ALIDMY KC L A+ +
Sbjct: 376 PNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMI 435
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F+ + ++++V W S+ISGY N SK+ E
Sbjct: 436 FYSLPQKNIVCWNSLISGYSNNSKMVE--------------------------------- 462
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
A F +M A ++ +WN++ISG+AQ+++ +ALK F ML SG P +T + V
Sbjct: 463 --AEELFKKMPAR----NVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSV 516
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A S+++G+ +HA + ++G+ +F G+AL DMY+K G L ++ +F +N
Sbjct: 517 LLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRND 576
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+W AMI ++G + SI LFE M+ G+ NE T +++L ACSH GLVE + F
Sbjct: 577 VAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFE- 635
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M + G+ +HY C+VD+L R+G + EA DLL ++ + A + CNI+ ++
Sbjct: 636 MMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKE 695
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+ + E+ G+V+LSN+ A+ G+W +A +R +MK N++K G S V+ R
Sbjct: 696 MGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIR 755
Query: 531 NEFVEK 536
+E ++K
Sbjct: 756 DEQLQK 761
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 166/356 (46%), Gaps = 44/356 (12%)
Query: 19 LLGKCMKSKALRQGKQVH----ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
+LG C + LR G+++H + C+N N+F + S L+ +Y C + A+++F +P
Sbjct: 384 VLGACASLQDLRSGRKIHNQTLKMACSN--NVF-VSSALIDMYCKCKQLPDAQMIFYSLP 440
Query: 75 NPNVFMLNWMV------------------MASAFTGNFQEAIGYFSLMREFIYRCNKF-- 114
N+ N ++ M + ++ I ++ R+FI F
Sbjct: 441 QKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHA 500
Query: 115 -----------TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
TFS VL AC L ++ GK VHA ++G + + VG AL DMY+K G
Sbjct: 501 MLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGD 560
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
L S++RVF+ M +R+ V+WT+MI G +E+++LFE M G+ PN+ T+ AI+ +
Sbjct: 561 LDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFA 620
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ G A +F M A G P + M+ A++ EA L +L K
Sbjct: 621 CSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDL---LLKIESKSE 677
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI-DMYSKCGSLKDA 338
+ +L A + + ++G + L D G L+ +MY+ CG KDA
Sbjct: 678 ANSWAALLSACNIYRNKEMGERAAKRL--QELDKDNTAGYVLLSNMYASCGKWKDA 731
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 188/451 (41%), Gaps = 103/451 (22%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMA-------------------------SAFTGNF- 94
GD+ SAR +FD +P +V MV A +A F
Sbjct: 162 GDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFV 221
Query: 95 -----QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF-ENDV 148
++A+G F M N+ T V+KAC+G + + +A + + ++
Sbjct: 222 LNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNL 281
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
V N+LI +Y + G +ARR+F M RDVVSWT+++ Y + ++ A + + M
Sbjct: 282 GVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP-- 339
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
E N+ ++ ++A + ++G++ A + +S+M A+
Sbjct: 340 --ERNEVSWGTLVARHEQKGNAKEAVSLYSQMLAD------------------------- 372
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
G +PN + VL A ++ GR+IH +M +VF SALIDM
Sbjct: 373 ----------GCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDM 422
Query: 329 YSKCGSLKDAR-------------------------------TLFEITRIKNVASWNAMI 357
Y KC L DA+ LF+ +NVASWN++I
Sbjct: 423 YCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSII 482
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
Y ++ +++ F ML G E+T SVL AC+ +E G ++ + + G+
Sbjct: 483 SGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMG-KMVHAKIIKLGI 541
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
K S + DM +SG + + + ++P
Sbjct: 542 KESIFVGTALSDMYAKSGDLDSSKRVFYEMP 572
>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 280/542 (51%), Gaps = 43/542 (7%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C K L+ K +H + ++ +L + L+ +Y+ C D+ SA +F + N
Sbjct: 210 CSKLGILKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDDLYSAERIFVNMANKTFISW 269
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
M+ +G F+EA F M E N T VLK+C GL +++GK +H A +
Sbjct: 270 TSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALK 329
Query: 142 MG--FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
G F++D +G LI++Y+ CG L +V + ER+VVSW +++S +EA+
Sbjct: 330 KGMTFQDDC-LGPVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLSINARQGLFEEAL 388
Query: 200 VLFERMKLEGLEPN----------------------------------QFTYNAIIASYA 225
VLF +M+ GL + +F NA+I Y+
Sbjct: 389 VLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCILGEFVKNALIGMYS 448
Query: 226 RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
R G S++A+ F+ + + V WN++ISGF QS EA+ L M ++ +K +V
Sbjct: 449 RCGFSDSAYMIFNDIKQKSSV----AWNSIISGFVQSGNSIEAIHLVDQMYLNCLKITDV 504
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
+QA ++ G+ +H + G+ D++ +AL DMY+KCG L+ A +F
Sbjct: 505 VFLSAIQACADMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSM 564
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
K+V SW+AMI YG HG +D++I F +M+E G++ N +T +++LSACSH G VE+G
Sbjct: 565 SEKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILSACSHSGSVEQGK 624
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
F M++ +GV+ S EH+AC+VD+L R+G + AY ++ +P S+ G NGC I
Sbjct: 625 FYFDLMRD-FGVEPSSEHFACLVDLLSRAGDVNGAYKIINSMPFPADASVLGNLLNGCRI 683
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
H R D+ + ++ ++ + +LSNI A G W EN R IM+ +K PG+S
Sbjct: 684 HQRMDMIPEIEKDLLKIRTSDTGHYSLLSNIYAEIGNWAARENTRGIMERSGYKKVPGYS 743
Query: 526 RV 527
+
Sbjct: 744 AI 745
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 205/418 (49%), Gaps = 41/418 (9%)
Query: 27 KALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
K LRQ Q+HA L +L N +KL+ YA G + S+ LVF+ NP+ FM ++
Sbjct: 12 KTLRQLNQLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPDSFMWGVLI 71
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
++ F+EAI + M + F F VL+AC G D+ G +VH + GF+
Sbjct: 72 KCHVWSHAFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCGFD 131
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF--- 202
ND + +L+ +Y + G L AR+VF + RD+VSW+S+IS Y + + +EA+ +F
Sbjct: 132 NDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLL 191
Query: 203 --ERMKLEG------------------------------LEPNQFTYNAIIASYARRGDS 230
ER+KL+ ++ + N++I Y+ D
Sbjct: 192 VNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDDL 251
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+A F M + F ++W +MI + +S EA ++F ML ++PN +T+ GV
Sbjct: 252 YSAERIFVNMANKTF----ISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGV 307
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHI-DVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
L++ ++ G+ IH + G+ D G LI++Y+ CG L + +N
Sbjct: 308 LKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERN 367
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
V SWN ++ + G+ + ++ LF +M + G+ + +L S +SAC + G ++ G +I
Sbjct: 368 VVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQI 425
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 243/526 (46%), Gaps = 45/526 (8%)
Query: 32 GKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G +VH + C D + F +++ L+G+Y G + AR VFD IP + +++W + S+
Sbjct: 118 GAKVHGRIIKCGFDNDPF-IETSLLGLYGELGCLTDARKVFDDIPVRD--LVSWSSIISS 174
Query: 90 FT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ G EA+ F L+ + + V +AC L +K K +H + +
Sbjct: 175 YVDKGEANEALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTC 234
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
++ N+LI+MYS C L SA R+F M + +SWTSMI Y EA +F +M
Sbjct: 235 EALDNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLE 294
Query: 208 EGLEPNQFTYNAIIA-----SYARRGDSNAAFAFFSRMTAE------------------G 244
+EPN T ++ S+ R G +A MT + G
Sbjct: 295 LKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLG 354
Query: 245 FVP---------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
+ ++V+WN ++S A+ EAL LF M G+ + +++ + A G
Sbjct: 355 YCEKVLLAIGERNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACG 414
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
GS+Q+GR+IH + + + F +ALI MYS+CG A +F + K+ +WN+
Sbjct: 415 NVGSLQLGRQIHGYAIKRCI-LGEFVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNS 473
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
+I + + G +I L ++M ++ +V +S + AC+ +EKG + + Y
Sbjct: 474 IISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLI-MY 532
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTM 475
GV+ + DM + G + A + + S + A +G +HGR D A+T
Sbjct: 533 GVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVSWS-AMISGYGMHGRIDAAITF 591
Query: 476 GEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ E+G+ KP+ F+ + + C+ G + + +M++ V+
Sbjct: 592 FNQMVELGI-KPNHITFMNILSACSHSGSVEQGKFYFDLMRDFGVE 636
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 279/541 (51%), Gaps = 58/541 (10%)
Query: 43 DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEA----- 97
D ++ S L G Y G++++AR +F+++P +V N M+ A G +EA
Sbjct: 119 DRDLISWNVMLSG-YVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFD 177
Query: 98 -------IGYFSLMREFIYRC----------NKFTFSIVLKACV--GLLDIKKGKQVHAV 138
I + L+ ++ +K + IV C+ G + K+ ++
Sbjct: 178 QMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSL 237
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+M + +S N +I Y++ GLL ARR+F + RDV +WT+M+SG+ +DEA
Sbjct: 238 FDRMPVRDKIS-WNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEA 296
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE----------GFVP- 247
+FE M E N+ ++NA+IA Y + A F +M + G+
Sbjct: 297 TRIFEEMP----EKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQC 352
Query: 248 ----------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
D ++W AMISG+AQS + EAL LF M G N + L
Sbjct: 353 GNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACAL 412
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
+ ++++G+++H + + G G+AL+ MY KCGS+++A +FE K++
Sbjct: 413 SSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIV 472
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SWN MI Y +HG ++ LFE M + ++ ++VTL+ VLSACSH GLV+KG+E F SM
Sbjct: 473 SWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSM 531
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
+ YG+ + +HY C++D+L R+GR+ EA +L++ +P Y + GA IHG +L
Sbjct: 532 YQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTEL 591
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
E+ FEM +V+LSN+ AA G W E +R M++K V+K PG+S VE +N
Sbjct: 592 GEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQN 651
Query: 532 E 532
+
Sbjct: 652 K 652
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 166/331 (50%), Gaps = 48/331 (14%)
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
++D+ N I Y + G SA VF+GM R V++ +MISGY + +K D A +FE+
Sbjct: 57 DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M L ++N +++ Y + G+ +AA A F++M + D+V+WNAM+SGFAQ+
Sbjct: 117 MPDRDL----ISWNVMLSGYVKNGNLSAARALFNQMPEK----DVVSWNAMLSGFAQNGF 168
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR---------EIHALVCRMGL 315
EA K+F MLV N ++ G+L A G I+ R EI + C MG
Sbjct: 169 VEEARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGG 224
Query: 316 HI------------------DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
++ D + + +I Y++ G L +AR LFE I++V +W AM+
Sbjct: 225 YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMV 284
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
+ ++GM+D + +FE M E+ NEV+ ++++ +EK E+F M R
Sbjct: 285 SGFVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMPSR--- 337
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ + +V + G + +A L ++P
Sbjct: 338 --NTSSWNTMVTGYAQCGNIDQAKILFDEMP 366
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 183/373 (49%), Gaps = 35/373 (9%)
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
I + ++ N + A G + A+ F+ MR R + T++ ++ G L K
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMIS---GYLSNNKF 107
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
V +M + D+ N ++ Y K G L +AR +F+ M E+DVVSW +M+SG+
Sbjct: 108 DCARKVFEKMP-DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQN 166
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD-SNAAFAFFSRMTAEGFVPDLVT 251
V+EA +F++M L N+ ++N ++++Y + G +A F S+M E +V+
Sbjct: 167 GFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWE-----IVS 217
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
WN ++ G+ + KR ++A LF M V N+ +TG Q G L+ + ++ E+
Sbjct: 218 WNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR-- 275
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
DVF +A++ + + G L +A +FE KN SWNAMI Y + ++ + E
Sbjct: 276 ------DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARE 329
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LF++M N + ++++ + G +++ +F M +R + +A ++
Sbjct: 330 LFDQMPSR----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCIS-----WAAMISGY 380
Query: 432 CRSGRMVEAYDLL 444
+SG+ EA L
Sbjct: 381 AQSGQSEEALHLF 393
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 6/180 (3%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLV 69
L+ + L C L C + AL GKQ+H L + + L+ +Y CG + A V
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDV 462
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLL 127
F+ I ++ N M+ A G +EA+ F M+ I + + T VL AC GL+
Sbjct: 463 FEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMTI-KPDDVTLVGVLSACSHTGLV 521
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMI 186
D K + +++ G + +ID+ + G L A + M F D +W +++
Sbjct: 522 D-KGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 260/486 (53%), Gaps = 40/486 (8%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ L+ VYA GD+ AR V D++P N +V GN +EA+ +S M R
Sbjct: 316 TALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCR 375
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N FS VL AC L D++ G+++H +M N+V V +ALIDMY KC L A+ +
Sbjct: 376 PNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMI 435
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F+ + ++++V W S+ISGY N SK+ E
Sbjct: 436 FYSLPQKNIVCWNSLISGYSNNSKMVE--------------------------------- 462
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
A F +M A ++ +WN++ISG+AQ+++ +ALK F ML SG P +T + V
Sbjct: 463 --AEELFKKMPAR----NVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSV 516
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A S+++G+ +HA + ++G+ +F G+AL DMY+K G L ++ +F +N
Sbjct: 517 LLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRND 576
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+W AMI ++G + SI LFE M+ G+ NE T +++L ACSH GLVE + F
Sbjct: 577 VAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFE- 635
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M + G+ +HY C+VD+L R+G + EA DLL ++ + A + CNI+ ++
Sbjct: 636 MMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKE 695
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+ + E+ G+V+LSN+ A+ G+W +A +R +MK N++K G S V+ R
Sbjct: 696 MGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIR 755
Query: 531 NEFVEK 536
+E ++K
Sbjct: 756 DEQLQK 761
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 166/356 (46%), Gaps = 44/356 (12%)
Query: 19 LLGKCMKSKALRQGKQVH----ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
+LG C + LR G+++H + C+N N+F + S L+ +Y C + A+++F +P
Sbjct: 384 VLGACASLQDLRSGRKIHNQTLKMACSN--NVF-VSSALIDMYCKCKQLPDAQMIFYSLP 440
Query: 75 NPNVFMLNWMV------------------MASAFTGNFQEAIGYFSLMREFIYRCNKF-- 114
N+ N ++ M + ++ I ++ R+FI F
Sbjct: 441 QKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHA 500
Query: 115 -----------TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
TFS VL AC L ++ GK VHA ++G + + VG AL DMY+K G
Sbjct: 501 MLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGD 560
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
L S++RVF+ M +R+ V+WT+MI G +E+++LFE M G+ PN+ T+ AI+ +
Sbjct: 561 LDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFA 620
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ G A +F M A G P + M+ A++ EA L +L K
Sbjct: 621 CSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDL---LLKIESKSE 677
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI-DMYSKCGSLKDA 338
+ +L A + + ++G + L D G L+ +MY+ CG KDA
Sbjct: 678 ANSWAALLSACNIYRNKEMGERAAKRL--QELDKDNTAGYVLLSNMYASCGKWKDA 731
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 188/451 (41%), Gaps = 103/451 (22%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMA-------------------------SAFTGNF- 94
GD+ SAR +FD +P +V MV A +A F
Sbjct: 162 GDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFV 221
Query: 95 -----QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF-ENDV 148
++A+G F M N+ T V+KAC+G + + +A + + ++
Sbjct: 222 LNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNL 281
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
V N+LI +Y + G +ARR+F M RDVVSWT+++ Y + ++ A + + M
Sbjct: 282 GVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP-- 339
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
E N+ ++ ++A + ++G++ A + +S+M A+
Sbjct: 340 --ERNEVSWGTLVARHEQKGNAKEAVSLYSQMLAD------------------------- 372
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
G +PN + VL A ++ GR+IH +M +VF SALIDM
Sbjct: 373 ----------GCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDM 422
Query: 329 YSKCGSLKDAR-------------------------------TLFEITRIKNVASWNAMI 357
Y KC L DA+ LF+ +NVASWN++I
Sbjct: 423 YCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSII 482
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
Y ++ +++ F ML G E+T SVL AC+ +E G ++ + + G+
Sbjct: 483 SGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMG-KMVHAKIIKLGI 541
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
K S + DM +SG + + + ++P
Sbjct: 542 KESIFVGTALSDMYAKSGDLDSSKRVFYEMP 572
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 176/562 (31%), Positives = 289/562 (51%), Gaps = 41/562 (7%)
Query: 8 INNLSVNYLDCLLGKCMKSK-ALRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNS 65
+ NL+ YL L + S AL K+VH ++ + + L+ +YA CG ++
Sbjct: 229 LPNLT-TYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDD 287
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
ARLVFD + + +V N M+ A G EA F M++ + + T+ +L V
Sbjct: 288 ARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVS 347
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
+ K+VH A ++G +D+ VG+A + MY +CG + A+ +F + R+V +W +M
Sbjct: 348 TGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAM 407
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------------------- 217
I G EA+ LF +M+ EG P+ T+
Sbjct: 408 IGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL 467
Query: 218 ------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
NA++ YA+ G++ A F M ++ TW MISG AQ +EA L
Sbjct: 468 VDLRVGNALVHMYAKCGNTMYAKQVFDDMVER----NVTTWTVMISGLAQHGCGHEAFSL 523
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F ML GI P+ T +L A TG+++ +E+H+ GL D+ G+AL+ MY+K
Sbjct: 524 FLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAK 583
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
CGS+ DAR +F+ ++V SW MIG +HG +++LF +M EG + N + ++V
Sbjct: 584 CGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAV 643
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
LSACSH GLV++G F S+ + YG++ + EHY C+VD+L R+G++ EA + +P+
Sbjct: 644 LSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEP 703
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRK 511
++ GA C +G ++A +E ++ + +V+LSNI AA G W + +R
Sbjct: 704 GDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRS 763
Query: 512 IMKEKNVQKQPGFSRVEKRNEF 533
+M+ + ++K+PG S +E N+
Sbjct: 764 MMQRRGIRKEPGRSWIEVDNQI 785
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 205/420 (48%), Gaps = 43/420 (10%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFD 71
+ YL +L C +L+ GK++HA + + + +++ LV +Y CG ++ A+L+FD
Sbjct: 31 ITYLS-ILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFD 89
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
K+ NV M+ A G QEA F M+ + N +T+ +L A ++
Sbjct: 90 KMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEW 149
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
K+VH+ A G D+ VGNAL+ MY+K G + AR VF GM ERD+ SWT MI G
Sbjct: 150 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQ 209
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY---------------------------------- 217
+ EA LF +M+ G PN TY
Sbjct: 210 HGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDL 269
Query: 218 ---NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
NA+I YA+ G + A F M D+++WNAMI G AQ+ +EA +F
Sbjct: 270 RVGNALIHMYAKCGSIDDARLVFDGMCDR----DVISWNAMIGGLAQNGCGHEAFTIFLK 325
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M G P++ T +L TG+ + +E+H +GL D+ GSA + MY +CGS
Sbjct: 326 MQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGS 385
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
+ DA+ +F+ ++NV +WNAMIG + ++ LF +M EG + T +++LSA
Sbjct: 386 IDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSA 445
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 143/463 (30%), Positives = 218/463 (47%), Gaps = 58/463 (12%)
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
M+ A G ++A+ +S MR + N+ T+ +LKAC + +K GK++HA Q G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
F++DV V AL++MY KCG + A+ +F M ER+V+SWT MI G + + EA F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 204 RMKLEGLEPNQFTY-----------------------------------NAIIASYARRG 228
+M+ EG PN +TY NA++ YA+ G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
+ A F M D+ +W MI G AQ R EA LF M G PN T
Sbjct: 181 SIDDARVVFDGMVER----DIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYL 236
Query: 289 GVLQAGGL--TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+L A + TG+++ +E+H + G D+ G+ALI MY+KCGS+ DAR +F+
Sbjct: 237 SILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMC 296
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
++V SWNAMIG ++G + +F +M +EG + T +S+L+ G E E
Sbjct: 297 DRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKE 356
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF-RNG 462
+ + E G+ + V M R G + +A +D L + N+M G +
Sbjct: 357 VHKHAVE-VGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQK 415
Query: 463 CNIHGRRDLAVTMG---EEFFEMGLRKPDGFVMLSNICAADGE 502
C GR L++ + E FF PD ++ + A GE
Sbjct: 416 C---GREALSLFLQMRREGFF------PDATTFVNILSANVGE 449
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 149/299 (49%), Gaps = 10/299 (3%)
Query: 6 FPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNS 65
FP VN L +G+ +AL K+VH+ L + + LV +YA CG+
Sbjct: 433 FPDATTFVNILSANVGE----EALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMY 488
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACV 124
A+ VFD + NV M+ A G EA F ++RE I + T+ +L AC
Sbjct: 489 AKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVP-DATTYVSILSACA 547
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
++ K+VH+ A G +D+ VGNAL+ MY+KCG + ARRVF M ERDV SWT
Sbjct: 548 STGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTV 607
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE- 243
MI G + +A+ LF +MKLEG +PN +++ A++++ + G + F +T +
Sbjct: 608 MIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDY 667
Query: 244 GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI 302
G P + + M+ ++ + EA M I+P + +L A G++++
Sbjct: 668 GIEPTMEHYTCMVDLLGRAGQLEEAKHFILNM---PIEPGDAPWGALLGACVTYGNLEM 723
>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
Length = 688
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 285/551 (51%), Gaps = 55/551 (9%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C+ S+ G Q+ + + L + + + + +Y+ G AR VFD++ +
Sbjct: 106 LSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKD- 164
Query: 79 FMLNWMVMASAF----TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
M++W + S T F+ + + +MRE + + +F+ V+ C D+K +Q
Sbjct: 165 -MISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV-ELDHVSFTSVITTCCHETDLKLARQ 222
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + + G+E+ + VGN L+ YSKCG+L + + VFH M ER+VVSWT+MIS S
Sbjct: 223 IHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SN 277
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
D+AV +F M+ +G+ PN+ T+ N+
Sbjct: 278 KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNS 337
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
I YA+ A F +T ++++WNAMISGFAQ+ +EALK+F
Sbjct: 338 FITLYAKFEALEDAKKAFEDIT----FREIISWNAMISGFAQNGFSHEALKMFLSAAAET 393
Query: 280 IKPNNVTVTGVLQAGGLTGSIQI--GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
+ PN T VL A I + G+ HA + ++GL+ SAL+DMY+K G++ +
Sbjct: 394 M-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDE 452
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+ +F KN W ++I Y HG ++ + LF +M++E + + VT +SVL+AC+
Sbjct: 453 SEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNR 512
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
G+V+KG EIF M E Y ++ S EHY+C+VDML R+GR+ EA +L+ +VP SM
Sbjct: 513 KGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQ 572
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
+ C +HG + + E EM +V + NI A EW +A +RK M++KN
Sbjct: 573 SMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKN 632
Query: 518 VQKQPGFSRVE 528
V K+ GFS ++
Sbjct: 633 VSKEAGFSWID 643
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 197/413 (47%), Gaps = 54/413 (13%)
Query: 23 CMKSKA----LRQGKQVHALLCTNDLNIFSLKSKLV-GVYAGCGDVNSARLVFDKIPNPN 77
C+ KA L++G Q+H T+ F S V G+Y G ++A +F+ + +P+
Sbjct: 7 CLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 66
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V ++W + S F N Q A+ + M+ + FT+S L CVG G Q+ +
Sbjct: 67 V--VSWNTILSGFDDN-QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQS 123
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD- 196
+ G E+D+ VGN+ I MYS+ G ARRVF M +D++SW S++SG
Sbjct: 124 TVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGF 183
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
EAVV+F M EG+E + ++ ++I +
Sbjct: 184 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 243
Query: 224 --YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y++ G A + F +M+ ++V+W MI S +++A+ +F M G+
Sbjct: 244 SRYSKCGVLEAVKSVFHQMSER----NVVSWTTMI-----SSNKDDAVSIFLNMRFDGVY 294
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN VT G++ A I+ G +IH L + G + G++ I +Y+K +L+DA+
Sbjct: 295 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 354
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
FE + + SWNAMI + ++G ++++F E M NE T SVL+A
Sbjct: 355 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNA 406
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/549 (30%), Positives = 268/549 (48%), Gaps = 71/549 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIP 74
L + C +AL G+Q+HA + S+ S L +Y C + AR +FD++P
Sbjct: 107 LPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMP 166
Query: 75 N-----------------------------------PNVFMLNWMVMASAFTGNFQEAIG 99
+ PN+ N M+ G + EA+G
Sbjct: 167 DRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVG 226
Query: 100 YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYS 159
F +M + + T S VL A L D+ G QVH + G +D V +A++DMY
Sbjct: 227 MFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYG 286
Query: 160 KCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNA 219
KCG + RVF DE E M++ L NA
Sbjct: 287 KCGCVKEMSRVF------------------------DEV----EEMEIGSL-------NA 311
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+ +R G + A F++ + ++VTW ++I+ +Q+ ++ EAL+LF+ M G
Sbjct: 312 FLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYG 371
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
++PN VT+ ++ A G ++ G+EIH R G+ DV+ GSALIDMY+KCG ++ AR
Sbjct: 372 VEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLAR 431
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
F+ N+ SWNA++ Y HG ++E+F ML+ G + + VT VLSAC+ G
Sbjct: 432 RCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNG 491
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
L E+G + SM E +G++ EHYAC+V +L R G++ EAY +++++P + GA
Sbjct: 492 LTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGAL 551
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ C +H L E+ F + P +++LSNI A+ G W E +R++MK K ++
Sbjct: 552 LSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLR 611
Query: 520 KQPGFSRVE 528
K PG+S +E
Sbjct: 612 KNPGYSWIE 620
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 204/407 (50%), Gaps = 46/407 (11%)
Query: 20 LGKCMKSK--ALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVF---D 71
L +C+ S +L Q +Q HAL+ LN+FS L + L+ YA +++ +L
Sbjct: 5 LSQCLSSSTASLSQARQAHALILR--LNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSS 62
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+P+P +F + ++ A A + +F + FS + + F +K+C L +
Sbjct: 63 HLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDP 122
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G+Q+HA A GF D V ++L MY KC + AR++F M +RDVV W++MI+GY
Sbjct: 123 GQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSR 182
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
+ V+EA LF M+ G+EPN ++N ++A + G + A F M +GF PD
Sbjct: 183 LGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPD--- 239
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
TV+ VL A G + +G ++H V
Sbjct: 240 --------------------------------GSTVSCVLPAVGCLEDVVVGAQVHGYVI 267
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
+ GL D F SA++DMY KCG +K+ +F+ + S NA + ++GMVD+++E
Sbjct: 268 KQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALE 327
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
+F + ++ M N VT S++++CS G + LE+FR M + YGV+
Sbjct: 328 VFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDM-QAYGVE 373
>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
Length = 818
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/535 (31%), Positives = 269/535 (50%), Gaps = 36/535 (6%)
Query: 30 RQGKQVHALLCTNDLNIFSLKSK-LVGVYAGCGDVNSARLVFDKI--------------- 73
R+G+ VHA L+ L L G+YA DV +A V D +
Sbjct: 155 RRGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACC 214
Query: 74 --------------------PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNK 113
P PNV N ++ + G +EA+G + M + R +
Sbjct: 215 ARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDA 274
Query: 114 FTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
T S +LK+ ++ G ++H + E DV G AL+DMY+KCG L A++VF
Sbjct: 275 TTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVFDA 334
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA 233
+ R++ +W S+++GY N + D A+ L E MK L+P+ T+N +I Y+ G S+ A
Sbjct: 335 LEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQA 394
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
++ A G P++V+W ++ISG + ++ M G++P+ VT++ +L+A
Sbjct: 395 VLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRA 454
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
+ G+E+H R D+ +ALIDMYSK GSL A+ +FE + KN+
Sbjct: 455 CAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLC 514
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
NAM+ HG +IELF M G++ + +T ++L+AC GLV +G E F M+
Sbjct: 515 NAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDGMET 574
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAV 473
+YGVK + E+YAC+VD+L R G + EA D + + P+ S GA GC+IHG LA
Sbjct: 575 KYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAE 634
Query: 474 TMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
F + ++++ N+ + + EAE+L+ MK + V +PG+S ++
Sbjct: 635 VAARNLFRLEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQ 689
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 166/361 (45%), Gaps = 52/361 (14%)
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE---RDVVSWTSMISG 188
Q+H++A + G D V AL+D+ ++ G S R+ H E +D V W ++
Sbjct: 71 APQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAM 130
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQ---------------------------------- 214
+ DEA+ +F M+ G+ +
Sbjct: 131 LAEAEEWDEAIAVFREMQARGVPRRRGRAVHAYALKLALDAHPLVPGFLAGMYAENADVA 190
Query: 215 --------------FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
+NA++A AR G + A +RM+ G P++ TWN ++SG +
Sbjct: 191 AATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCS 250
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
+ R+ EAL + ML G++P+ TV+ +L++ TG ++ G EIH R L DV+
Sbjct: 251 RHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVY 310
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
TG+AL+DMY+KCG L A+ +F+ +N+ +WN+++ Y G D ++EL E M +
Sbjct: 311 TGTALVDMYAKCGRLDCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNR 370
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ + T +++ S G + + + R +K GV + + ++ C +G ++
Sbjct: 371 LDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAA-GVTPNVVSWTSLISGSCHNGEYEDS 429
Query: 441 Y 441
+
Sbjct: 430 F 430
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 162/389 (41%), Gaps = 83/389 (21%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL + LR G ++H N L ++++ + LV +YA CG ++ A+ VFD + +
Sbjct: 280 LLKSVANTGLLRHGMEIHCFFLRNQLEPDVYT-GTALVDMYAKCGRLDCAQKVFDALEHR 338
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N+ N +V A G F A+ LM KK +
Sbjct: 339 NLTTWNSLVAGYANAGRFDIALELVELM-------------------------KKNR--- 370
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSA----RRVFHGMFERDVVSWTSMISGYCNV 192
+ D++ N LI YS G A R++ +VVSWTS+ISG C+
Sbjct: 371 -------LDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHN 423
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYN---------------------------------- 218
+ +++ M+ +G++P+ T +
Sbjct: 424 GEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVS 483
Query: 219 -AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
A+I Y++ G +A F + + +LV NAM++G A + EA++LF M
Sbjct: 484 TALIDMYSKGGSLVSAKVIFESIQQK----NLVLCNAMLTGLAVHGQGREAIELFHDMWN 539
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGRE-IHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
SG+KP+++T T +L A G + G E + + G+ + ++D+ ++CG L
Sbjct: 540 SGLKPDSITFTALLTACRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLD 599
Query: 337 DARTLFEITRIKNVAS-WNAMIGCYGKHG 364
+A E + I AS W A++ HG
Sbjct: 600 EAMDFIERSPIDPGASHWGALLTGCSIHG 628
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 89/185 (48%), Gaps = 6/185 (3%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
S+ + LL C ++GK++H AL D ++ + + L+ +Y+ G + SA+++
Sbjct: 444 SLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMV-VSTALIDMYSKGGSLVSAKVI 502
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
F+ I N+ + N M+ A G +EAI F M + + TF+ +L AC + +
Sbjct: 503 FESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLV 562
Query: 130 KKGKQV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARR-VFHGMFERDVVSWTSMIS 187
+G + + T+ G + ++D+ ++CG L A + + W ++++
Sbjct: 563 TEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLT 622
Query: 188 GYCNV 192
G C++
Sbjct: 623 G-CSI 626
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 288/554 (51%), Gaps = 57/554 (10%)
Query: 29 LRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
+RQ + +H ++ + L + + L YA G + A+ VFD+ +V N M+ A
Sbjct: 241 IRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGA 300
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
A G+ EA F+ M +K T + A G ++ G+ +H A + G + D
Sbjct: 301 YAQHGHMSEAALLFARMLHEGISPSKVTL---VNASTGCSSLRFGRMIHGCALEKGLDRD 357
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
+ +GNAL+DMY++CG AR +F + VSW +MI+G ++ AV LF+RM+L
Sbjct: 358 IVLGNALLDMYTRCGSPEEARHLFK-RIPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQL 416
Query: 208 EGLEPNQFTY---------------------------------------NAIIASYARRG 228
EG+ P + TY A++ YA G
Sbjct: 417 EGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCG 476
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
+ A A F R E D+V+WNA+IS +Q AL F+ M + G+ PN +T
Sbjct: 477 AIDEAAASFQRGAMEDR-HDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCV 535
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI- 347
VL A ++ G +H + G+ ++F +AL MY +CGSL+ AR +FE +
Sbjct: 536 AVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVE 595
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
++V +NAMI Y ++G+ +++LF RM +EG R +E + +SVLSACSHGGL ++G EI
Sbjct: 596 RDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEI 655
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR----QVPMYVTNSMAGAFRNGC 463
FRSM++ YG+ S++HYAC VD+L R+G + +A +L+R + + V ++ GA R
Sbjct: 656 FRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYR 715
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
++ R LA +M E+ +V+LSNI A G+W EA +R M+ + ++K+ G
Sbjct: 716 DV-DRGRLANSM---VRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAG 771
Query: 524 FSRVE---KRNEFV 534
S +E + +EFV
Sbjct: 772 KSWIEIKSRVHEFV 785
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/411 (32%), Positives = 203/411 (49%), Gaps = 48/411 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL + L QG+++HA + + L L + L+ +Y C + VF ++ +
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLE-EELGNHLLRLYLKCESLGDVEEVFSRLEVRD- 92
Query: 79 FMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+W + +A+T G + AIG F M++ RC+ TF VLKAC L D+ +G+ +H
Sbjct: 93 -EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIH 151
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + G + + N L+ +Y CG + SA +F M ERD+VSW + I+ +
Sbjct: 152 AWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLG 210
Query: 197 EAVVLFERMKLEGLEPNQFTY--------------------------------NAIIASY 224
A+ LF+RM+LEG+ P + T A+ ++Y
Sbjct: 211 IALELFQRMQLEGVRPARITLVIALTVCATIRQAQAIHFIVRESGLEQTLVVSTALASAY 270
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
AR G A F R D+V+WNAM+ +AQ +EA LF ML GI P+
Sbjct: 271 ARLGHLYQAKEVFDRAAER----DVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSK 326
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
VT ++ A S++ GR IH GL D+ G+AL+DMY++CGS ++AR LF+
Sbjct: 327 VT---LVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFK- 382
Query: 345 TRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
RI N SWN MI + G + ++ELF+RM EGM T +++L A
Sbjct: 383 -RIPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEA 432
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 171/358 (47%), Gaps = 55/358 (15%)
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
+ +G+++HA +G E ++ GN L+ +Y KC L VF + RD SWT++I+
Sbjct: 45 LSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-- 246
Y + A+ +F RM+ EG+ + T+ A++ + AR GD + + + + G
Sbjct: 103 YTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGK 162
Query: 247 ----------------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
DLV+WNA I+ AQS AL+LF+ M +
Sbjct: 163 SVLANLLLHIYGSCGCVASAMLLFEKMERDLVSWNAAIAANAQSGDLGIALELFQRMQLE 222
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G++P +T+ L + +I+ + IH +V GL + +AL Y++ G L A
Sbjct: 223 GVRPARITLVIALT---VCATIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQA 279
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS-- 396
+ +F+ ++V SWNAM+G Y +HG + + LF RML EG+ ++VTL++ + CS
Sbjct: 280 KEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSL 339
Query: 397 ------HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
HG +EKGL+ + ++DM R G EA L +++P
Sbjct: 340 RFGRMIHGCALEKGLDRDIVLGN------------ALLDMYTRCGSPEEARHLFKRIP 385
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
+L+A G + GR IHA + +GL ++ G+ L+ +Y KC SL D +F +++
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
ASW +I Y +HG +I +F RM +EG+R + VT ++VL AC+ G + +G I
Sbjct: 93 EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 285/540 (52%), Gaps = 46/540 (8%)
Query: 29 LRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
L G++VH L+ + +++ + + + Y+ G V+ A +FD + ++ N M+
Sbjct: 155 LDDGRKVHCLVLKLGFECDVY-IAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMIS 213
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
G EA+ F MR + T S +L CV L DI G +H A ++G E
Sbjct: 214 GFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEF 273
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D+ V NALI+MY+K G L SA +F+ M RD+VSW S+++ + K A+ ++ +M
Sbjct: 274 DLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMH 333
Query: 207 LEGLEPNQFTY------------------------------------NAIIASYARRGDS 230
G+ P+ T NAII YA+ G
Sbjct: 334 SIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFI 393
Query: 231 NAAFAFFSRMTAEGF-VPDLVTWNAMISGFAQSKRENEALKLFKGM-LVSGIKPNNVTVT 288
++A R EG V D+++WN++I+G++Q+ NEA+ ++ M SG PN T
Sbjct: 394 DSA-----RKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWV 448
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
+L A G+++ G + H + + L+ D+F + L+DMY KCG L DA +LF +
Sbjct: 449 SILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQ 508
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+ SWNA+I C+G HG +++LF+ M EG++ + +T +S+LSACSH GLV++G F
Sbjct: 509 SSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCF 568
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
+ M+E YG++ S +HY C+VD+ R+G + +A++ ++ +P+ S+ GA C IH
Sbjct: 569 QLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHEN 628
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+L T+ + ++ +V+LSNI A G W + +R + +++ ++K PG+S +E
Sbjct: 629 VELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIE 688
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/530 (30%), Positives = 272/530 (51%), Gaps = 61/530 (11%)
Query: 32 GKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
KQ+HALL + +IF L +KL+ YA GD+ ARL FD+I +V+ N M+ A A
Sbjct: 59 AKQLHALLVVSGKTQSIF-LSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYA 117
Query: 90 FTGNFQEAIGYFS-LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
G+F A+ F+ + + + +TF V++AC L D G++VH + ++GFE DV
Sbjct: 118 RIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFECDV 174
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
+ + I YS+ G + A +F M RD+ +W +MISG+ KV EA+ +F+ M+ +
Sbjct: 175 YIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFK 234
Query: 209 -----------------------------------GLEPNQFTYNAIIASYARRGDSNAA 233
GLE + F NA+I YA+ G+ +A
Sbjct: 235 SVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSA 294
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
F++M V D+V+WN++++ F Q+K+ AL ++ M G+ P+ +T+ +
Sbjct: 295 ETIFNQMK----VRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASV 350
Query: 294 GGLTGSIQIGREIHALVCR--MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
G+ R IH V R LH D+ G+A+IDMY+K G + AR +FE +K+V
Sbjct: 351 AAELGNFLSSRSIHGFVTRRCWFLH-DIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVI 409
Query: 352 SWNAMIGCYGKHGMVDSSIELFERM-LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SWN++I Y ++G+ + +I+++ M G N+ T +S+L+A S G +++G++
Sbjct: 410 SWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQ 469
Query: 411 MKER---YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
+ + + + +S C+VDM + G++ +A L +VP + S A + +HG
Sbjct: 470 LIKNFLYFDIFVS----TCLVDMYGKCGKLADALSLFYEVPHQSSVSW-NAIISCHGLHG 524
Query: 468 RRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKE 515
AV + +E G+ KPD FV L + C+ G E + ++M+E
Sbjct: 525 YGLKAVKLFKEMQSEGV-KPDHITFVSLLSACSHSGLVDEGQWCFQLMQE 573
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 10/207 (4%)
Query: 28 ALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
AL+QG + H L N L +IF + + LV +Y CG + A +F ++P+ + N ++
Sbjct: 459 ALKQGMKAHGQLIKNFLYFDIF-VSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAII 517
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV--GLLDIKKGKQVHAVATQM- 142
G +A+ F M+ + + TF +L AC GL+D +G+ + +
Sbjct: 518 SCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVD--EGQWCFQLMQETY 575
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER-DVVSWTSMISGYCNVSKVDEAVVL 201
G + ++D++ + G L A M R DV W +++ G C + + E V
Sbjct: 576 GIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALL-GACRIHENVELVRT 634
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRG 228
L+ N Y + YA+ G
Sbjct: 635 VSDHLLKVESENVGYYVLLSNIYAKLG 661
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/452 (35%), Positives = 242/452 (53%), Gaps = 32/452 (7%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
N+FTFS +L A + + G+Q+H++ + GF+ ++ VG AL+DMY+KC + SA RVF
Sbjct: 9 NQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVF 68
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFER-MKLEGLEPNQFTYNAIIASYARRGDS 230
M ER++VSW SMI G+ + + D AV +F+ ++ + + PN+ + ++++++ A G
Sbjct: 69 DQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGL 128
Query: 231 NAAFAFFSRMTAEGFVP-------------------------------DLVTWNAMISGF 259
N + G VP D+VTWN ++ GF
Sbjct: 129 NFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGF 188
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
Q+ + EA F M GI P+ + + VL + ++ G IH + ++G ++
Sbjct: 189 VQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNM 248
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+LI MY+KCGSL DA +FE NV SW AMI Y HG + IELFE ML E
Sbjct: 249 CILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSE 308
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G+ + VT + VLSACSH G VE+GL F SMK+ + + EHYAC+VD+L R+G + E
Sbjct: 309 GIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDE 368
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A + +PM T S+ GA C +G + E FEM P +V+L+N+C
Sbjct: 369 AKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTR 428
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
G EA +R++M V+K+PG S ++ +N
Sbjct: 429 SGRLEEANEVRRLMGVNGVRKEPGCSWIDVKN 460
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 203/428 (47%), Gaps = 60/428 (14%)
Query: 31 QGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
G+Q+H+L+ + D NIF + + LV +YA C D++SA VFD++P N+ N M++
Sbjct: 28 HGQQLHSLIHKHGFDANIF-VGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGF 86
Query: 89 AFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ A+G F ++RE N+ + S VL AC + + G+QVH V + G
Sbjct: 87 FHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPL 146
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V N+L+DMY KC ++F + +RDVV+W ++ G+ K +EA F M+
Sbjct: 147 TYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRR 206
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL------------------ 249
EG+ P++ +++ ++ S A + A ++ G+V ++
Sbjct: 207 EGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVD 266
Query: 250 -------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
++W AMIS + N+ ++LF+ ML GI+P++VT VL A
Sbjct: 267 AYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSH 326
Query: 297 TGSIQIG-------REIHALVCRMGLHIDVFTG----SALIDMYSKCGSLKDARTLFEIT 345
TG ++ G ++IH D+ G + ++D+ + G L +A+ E
Sbjct: 327 TGRVEEGLAHFNSMKKIH----------DMNPGPEHYACMVDLLGRAGWLDEAKRFIESM 376
Query: 346 RIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSACSHGGLVEK 403
+K S W A++G K+G + E ER+ E E L++ + C+ G +E+
Sbjct: 377 PMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLA--NMCTRSGRLEE 434
Query: 404 GLEIFRSM 411
E+ R M
Sbjct: 435 ANEVRRLM 442
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 169/359 (47%), Gaps = 13/359 (3%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCG 61
+ + P N +SV+ +L C L G+QVH ++ L + + + L+ +Y C
Sbjct: 106 KTVIP-NEVSVS---SVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCR 161
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLK 121
+ +F + + +V N +VM F+EA YF +MR ++ +FS VL
Sbjct: 162 FFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLH 221
Query: 122 ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS 181
+ L + +G +H ++G+ ++ + +LI MY+KCG L A +VF G+ + +V+S
Sbjct: 222 SSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVIS 281
Query: 182 WTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT 241
WT+MIS Y ++ + LFE M EG+EP+ T+ ++++ + G A F+ M
Sbjct: 282 WTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMK 341
Query: 242 A-EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI 300
P + M+ ++ +EA + + M +KP +L A G++
Sbjct: 342 KIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESM---PMKPTPSVWGALLGACRKYGNL 398
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
++GRE + M + + L +M ++ G L++A E+ R+ V GC
Sbjct: 399 KMGREAAERLFEMEPY-NPGNYVLLANMCTRSGRLEEAN---EVRRLMGVNGVRKEPGC 453
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 149/343 (43%), Gaps = 51/343 (14%)
Query: 205 MKLEGLEPNQFTYNAIIAS-----------------------------------YARRGD 229
M+ G PNQFT+++I+++ YA+ D
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVT 288
++A F +M +LV+WN+MI GF + + A+ +FK +L + PN V+V+
Sbjct: 61 MHSAVRVFDQMPER----NLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVS 116
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
VL A G + GR++H +V + GL + ++L+DMY KC + LF+ +
Sbjct: 117 SVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDR 176
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+V +WN ++ + ++ + + F M EG+ +E + +VL + + + +G I
Sbjct: 177 DVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIH 236
Query: 409 RSMKERYGVKISKEHYACV----VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
+ +K+ C+ + M + G +V+AY + + + S A +
Sbjct: 237 DQI-----IKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWT-AMISAYQ 290
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEA 506
+HG + + + E G+ FV + + C+ G E
Sbjct: 291 LHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG 333
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/515 (31%), Positives = 271/515 (52%), Gaps = 41/515 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
L+ +Y + R +FDK+ + N M+ + G ++E+I F M ++ +
Sbjct: 257 LLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPD 315
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
T + +L+AC L D++ GK VH G+E D + N LI+MY+KCG L +++ VF
Sbjct: 316 LLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFS 375
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------- 217
GM +D VSW SMI+ Y DEA+ LF+ MK + ++P+ TY
Sbjct: 376 GMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHL 434
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
N ++ YA+ G+ + F M A D++TWN +I+
Sbjct: 435 GKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR----DIITWNTIIA 490
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
S+ N L++ M G+ P+ T+ +L L + + G+EIH + ++GL
Sbjct: 491 SCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLES 550
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
DV G+ LI+MYSKCGSL+++ +F++ + K+V +W A+I G +G ++ F M
Sbjct: 551 DVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEME 610
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
G+ + V ++++ ACSH GLVE+GL F MK+ Y ++ EHYACVVD+L RS +
Sbjct: 611 AAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALL 670
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
+A D + +P+ +S+ GA + C + G ++A + E E+ +V++SNI
Sbjct: 671 DKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIY 730
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
AA G+W + ++RK +K + ++K PG S +E +N+
Sbjct: 731 AALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNK 765
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 230/442 (52%), Gaps = 40/442 (9%)
Query: 31 QGKQVHALLCTNDLN---IFSLKSKLVGVYAGCGDVNSARLVFD-KIPNPNVFMLNWMVM 86
Q ++H+L+ T L+ IFS +KL+ YA D S+ VF P+ NV++ N ++
Sbjct: 31 QLHKLHSLIITLGLHHSVIFS--AKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIR 88
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
A G F EA+ +S + + + +TF V+ AC GLLD + K +H MGF +
Sbjct: 89 ALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGS 148
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D+ +GNALIDMY + L AR+VF M RDVVSW S+ISGY +EA+ ++ R +
Sbjct: 149 DLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFR 208
Query: 207 LEGLEPNQFTYNAIIAS-----YARRGD-----------------SNAAFAFF------- 237
G+ P+ +T ++++ + GD +N + +
Sbjct: 209 NLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLI 268
Query: 238 --SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
R+ + + D V+WN MI G++Q E++KLF M V+ KP+ +T+T +LQA G
Sbjct: 269 DGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACG 327
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
G ++ G+ +H + G D + LI+MY+KCG+L ++ +F + K+ SWN+
Sbjct: 328 HLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNS 387
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
MI Y ++G D +++LF +M++ ++ + VT + +LS + G + G E+ + +
Sbjct: 388 MINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLA-KM 445
Query: 416 GVKISKEHYACVVDMLCRSGRM 437
G + +VDM + G M
Sbjct: 446 GFNSNIVVSNTLVDMYAKCGEM 467
>gi|225468012|ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 602
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 256/474 (54%), Gaps = 41/474 (8%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
N +EA+ F M + KF L +C LL+ G Q+HA Q GFE+++ +
Sbjct: 80 ANVREALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLN 139
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
+AL+D+Y+KC + A+RVF GM + D VSWTS+ISG+ + EA++ F+ M ++
Sbjct: 140 SALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIK 199
Query: 212 PNQFTYNAIIAS------------------------------------YARRGDSNAAFA 235
PN TY ++I++ Y++ G + A
Sbjct: 200 PNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVL 259
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F D + +N+MISG++Q+ EALKLF M +G+ P + T+T +L A G
Sbjct: 260 LFGTTIER----DNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACG 315
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
+Q GR++H+LV +MG +VF SAL+DMYSKCGS+ +AR +F+ KN W +
Sbjct: 316 SLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTS 375
Query: 356 MIGCYGKHGMVDSSIELFERML-EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
MI Y + G + LFER++ EEG + + +VL+AC+H G ++KG++ F M+
Sbjct: 376 MITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRD 435
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVT 474
YG+ + YAC+VD+ R+G + +A +L+ +P + M G+F + C ++G +L
Sbjct: 436 YGLVPDLDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGRE 495
Query: 475 MGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
++ F+M +V +++I A G W E +RK+MK+K ++K G+S VE
Sbjct: 496 AADKLFKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVE 549
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 162/336 (48%), Gaps = 41/336 (12%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNF--QEAIGYFSLMREFI 108
S L+ Y+ CG ++ A L+F + + N M+ S ++ N +EA+ F MR
Sbjct: 242 SCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMI--SGYSQNLFGEEALKLFVEMRNNG 299
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
T + +L AC L +++G+QVH++ +MG E++V V +AL+DMYSKCG + AR
Sbjct: 300 LNPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEAR 359
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM-KLEGLEPNQFTYNAIIASYARR 227
VF E++ V WTSMI+GY + E + LFER+ EG P+ + A++ +
Sbjct: 360 CVFDQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHA 419
Query: 228 GDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G + +F++M + G VPDL + ++ + ++ +A +L + + +PN+V
Sbjct: 420 GFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAI---PCEPNSVM 476
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
L + L G ++GRE A LF++
Sbjct: 477 WGSFLSSCKLYGEAELGREA-------------------------------ADKLFKMEP 505
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+ A + AM Y + G+ +E+ + M ++G+R
Sbjct: 506 C-STAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLR 540
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 197/440 (44%), Gaps = 55/440 (12%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C K G Q+HA + N+F L S LV +YA C + A+ VFD + +
Sbjct: 108 LNSCAKLLNWGLGVQIHARIIQTGFEDNLF-LNSALVDLYAKCDAIVDAKRVFDGMEKHD 166
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI-KKGKQ 134
++W + S F+ G +EAI +F M + N T+ V+ AC GL I +
Sbjct: 167 --QVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSVISACTGLETIFDQCAL 224
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+HA ++GF V + LID YSKCG + A +F ERD + + SMISGY
Sbjct: 225 LHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLF 284
Query: 195 VDEAVVLFERMKLEGLEP-----------------------------------NQFTYNA 219
+EA+ LF M+ GL P N F +A
Sbjct: 285 GEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSA 344
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV-S 278
++ Y++ G + A F + + + V W +MI+G+AQS R E L LF+ ++
Sbjct: 345 LLDMYSKCGSIDEARCVFDQAVEK----NTVLWTSMITGYAQSGRGPEGLGLFERLVTEE 400
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR-MGLHIDVFTGSALIDMYSKCGSLKD 337
G P+++ T VL A G + G + + R GL D+ + L+D+Y + G L+
Sbjct: 401 GFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRK 460
Query: 338 ARTLFE-ITRIKNVASWNAMIGCYGKHGMVDSSIELFERM--LEEGMRANEVTLISVLSA 394
A+ L E I N W + + +G + E +++ +E A V + S+
Sbjct: 461 AKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAPYVAMASIY-- 518
Query: 395 CSHGGLVEKGLEIFRSMKER 414
+ GL + +EI + MK++
Sbjct: 519 -AQAGLWSEVVEIRKLMKQK 537
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 10 NLSVNYLDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSAR 67
N + + L +L C L+QG+QVH+L+ ++ N+F + S L+ +Y+ CG ++ AR
Sbjct: 301 NPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVV-SALLDMYSKCGSIDEAR 359
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS-LMREFIYRCNKFTFSIVLKAC--V 124
VFD+ N + M+ A +G E +G F L+ E + + F+ VL AC
Sbjct: 360 CVFDQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHA 419
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWT 183
G LD K + + G D+ L+D+Y + G L A+ + + E + V W
Sbjct: 420 GFLD-KGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWG 478
Query: 184 SMISGYCNVSKVDEAVVLFERM-KLEGLEP-NQFTYNAIIASYARRG 228
S +S C + EA + E KL +EP + Y A+ + YA+ G
Sbjct: 479 SFLSS-CKL--YGEAELGREAADKLFKMEPCSTAPYVAMASIYAQAG 522
>gi|297834340|ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330892|gb|EFH61311.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 652
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 292/550 (53%), Gaps = 40/550 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLK--SKLVGVYAGCGDVNSARLVFDKIPNPN 77
L +C + K G+Q+H + S + + LV +YA CG + A LVF +
Sbjct: 66 LQRCAQRKDSVSGQQIHGFMVRKGFLDDSPRAVTSLVNMYAKCGLMRRAVLVFGG-SERD 124
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
VF N ++ G+ +A+ + MR +K+TF +LK +++ K+VHA
Sbjct: 125 VFGYNALISGFVVNGSPLDAMDMYREMRAKGILPDKYTFPSLLKGS-DAMEVSDVKKVHA 183
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD-VVSWTSMISGYCNVSKVD 196
+A ++GF +D VG+AL+ YSK + A++VF + +RD V W ++++GY ++ + +
Sbjct: 184 LAFKLGFVSDCYVGSALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSHIFRFE 243
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
+A+++F +M+ EG+ ++ T ++++S+ GD + + GF +V NA+I
Sbjct: 244 DALIVFSKMREEGVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDSGIVVSNALI 303
Query: 257 SGFAQSKRENEA-------------------------------LKLFKGMLVSGIKPNNV 285
+ +SK EA L LF+ ML SGI+P+ V
Sbjct: 304 DLYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIV 363
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGL----HIDVFTGSALIDMYSKCGSLKDARTL 341
T+T VL G S++ GREIH + GL + F ++L+DMY KCG L+DAR +
Sbjct: 364 TLTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRDARMV 423
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ R+K+ ASWN MI YG + ++++F M G++ +E+T + +L ACSH G V
Sbjct: 424 FDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFV 483
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
+G M+ Y + + +HYACV+DML R+ ++ EAYDL +P+ + + +
Sbjct: 484 NEGRNFLAQMETLYNILPTSDHYACVIDMLGRADKLEEAYDLAISMPICDNPVVWRSILS 543
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C +HG +DLAV G+ +E+ +V++SN+ ++ E ++R MKE+NV+K
Sbjct: 544 SCRLHGNKDLAVVAGKRLYELEPEHCGVYVLMSNVYVEAKKYEEVLDVRDTMKEQNVKKT 603
Query: 522 PGFSRVEKRN 531
PG S + +N
Sbjct: 604 PGCSWIGLQN 613
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 219/485 (45%), Gaps = 59/485 (12%)
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NP+ F + S F + G + N T L+ C D G+Q
Sbjct: 24 NPDFFA---AINPSTFASLYSTVSGQIEEHPKRYEHHNVATSIATLQRCAQRKDSVSGQQ 80
Query: 135 VHAVATQMGFENDVSVG-NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY-CNV 192
+H + GF +D +L++MY+KCGL+ A VF G ERDV + ++ISG+ N
Sbjct: 81 IHGFMVRKGFLDDSPRAVTSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVVNG 139
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTY----------------------------------N 218
S +D A+ ++ M+ +G+ P+++T+ +
Sbjct: 140 SPLD-AMDMYREMRAKGILPDKYTFPSLLKGSDAMEVSDVKKVHALAFKLGFVSDCYVGS 198
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A++ SY++ A F + D V WNA+++G++ R +AL +F M
Sbjct: 199 ALVTSYSKFMSVEDAQKVFDELPDRD---DSVLWNALVNGYSHIFRFEDALIVFSKMREE 255
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G+ + T+T VL + ++G + GR IH L +MG + +ALID+Y K L++A
Sbjct: 256 GVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDSGIVVSNALIDLYGKSKWLEEA 315
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
++FE +++ +WN+++ + G D ++ LFE ML G+R + VTL +VL C
Sbjct: 316 NSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIVTLTTVLPTCGRL 375
Query: 399 GLVEKGLEIFRSMKERYGVKISKEH----YACVVDMLCRSGRMVEA---YDLLRQVPMYV 451
+++G EI M G+ K + ++DM + G + +A +D +R
Sbjct: 376 ASLKQGREIHGYMIAS-GLLNRKSSNGFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSAS 434
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENL 509
N M NG + +LA+ M G+ KPD FV L C+ G +E N
Sbjct: 435 WNIMI----NGYGVQSCGELALDMFSCMCRAGV-KPDEITFVGLLQACSHSGFVNEGRNF 489
Query: 510 RKIMK 514
M+
Sbjct: 490 LAQME 494
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL------NIFSLKSKLVGVYAGCGDVNSARLV 69
L +L C + +L+QG+++H + + L N F + + L+ +Y CGD+ AR+V
Sbjct: 365 LTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGF-IHNSLMDMYVKCGDLRDARMV 423
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
FD + + N M+ + A+ FS M + ++ TF +L+AC
Sbjct: 424 FDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQAC 477
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/529 (32%), Positives = 268/529 (50%), Gaps = 44/529 (8%)
Query: 19 LLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
++ C L G +H AL+ N+F +++ L+ +Y CG V AR VF+ +
Sbjct: 190 VIKACSVMSMLNVGVLIHGRALVSGFSSNMF-VQNSLLAMYMNCGKVGLARQVFNVMLKR 248
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V N M+ G +EA+ F+ M + + T L +C L +++ G +VH
Sbjct: 249 SVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVH 308
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ + + + V NAL+DMYS+CG + A VF E+DV++WTSMI+GY
Sbjct: 309 KLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAK 368
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
A+ L M+L+G+ PN T A+I
Sbjct: 369 SALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALI 428
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ + +F F++ + + VP WNA++SG ++ EA+ LFK ML+ ++
Sbjct: 429 DMYAKCNAVSYSFQVFAKTSMKRTVP----WNALLSGLIHNELAREAVGLFKSMLIEEVE 484
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
N+ T V+ A + ++ +H+ + R G + + LIDMYSKCGSL A +
Sbjct: 485 ANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKI 544
Query: 342 FE--ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
F+ + K++ W+ +I YG HG ++++ LF +M+ GM+ NE+T SVL ACSH G
Sbjct: 545 FDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRG 604
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LV+ GL +F+ M E Y HY CVVD+L R+GR+ EAYDL++ +P +S+ GA
Sbjct: 605 LVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGAL 664
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
C IH +L E FE+ +++L+NI AA G W +AEN
Sbjct: 665 LGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWKDAEN 713
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 151/553 (27%), Positives = 256/553 (46%), Gaps = 48/553 (8%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL----NIFSLKSKLVGVYAGCGDVNSAR 67
+V+ D LL +++L + K +H T+ L N L S L YA CG V AR
Sbjct: 78 NVHRCDSLLCHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLAR 137
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGL 126
+FD + +P++F+ N ++ G +A+ F S++ +K+TF +V+KAC +
Sbjct: 138 KLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVM 197
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
+ G +H A GF +++ V N+L+ MY CG + AR+VF+ M +R VVSW +MI
Sbjct: 198 SMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMI 257
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------------- 217
SG+ + +EA+ +F M +EP+ T
Sbjct: 258 SGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQ 317
Query: 218 ------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
NA++ Y+R G + A F AE D++TW +MI+G+ + AL L
Sbjct: 318 EKIEVRNALVDMYSRCGGMDEASLVF----AETKEKDVITWTSMINGYIMNGNAKSALAL 373
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
M + G+ PN VT+ +L A ++ G+ +HA V R L DV +ALIDMY+K
Sbjct: 374 CPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAK 433
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
C ++ + +F T +K WNA++ + + ++ LF+ ML E + AN T SV
Sbjct: 434 CNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSV 493
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
+ A + +++ + + S R G ++DM + G + A+ + ++P
Sbjct: 494 IPAYAILADLKQVMNL-HSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKE 552
Query: 452 TNSMA-GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENL 509
+ + G +HG + AV + + G++ + F + + C+ G + L
Sbjct: 553 KDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTL 612
Query: 510 RKIMKEKNVQKQP 522
K M E N P
Sbjct: 613 FKYMIE-NYPSSP 624
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/540 (31%), Positives = 280/540 (51%), Gaps = 41/540 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
LG C+ + A+ G D N+F + S LV +Y V AR VFDK+P+ +
Sbjct: 121 LGMCLHAHAVVDG---------FDSNLF-VASALVDLYCKFSRVAYARKVFDKMPDRDTV 170
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
+ N M+ + +++ F M R + T + VL A + ++K G + +A
Sbjct: 171 LWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLA 230
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
++GF D V LI ++SKC + +AR +F + + D+VS+ ++ISG+ + + AV
Sbjct: 231 LKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAV 290
Query: 200 VLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------SNAAFAFF 237
F + + G + T +I + G S A +
Sbjct: 291 KYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIY 350
Query: 238 SRMTA---------EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
SR+ E + WNAMISG+AQS A+ LF+ M+ + PN VT+T
Sbjct: 351 SRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTIT 410
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
+L A G++ G+ +H L+ L +++ +ALIDMY+KCG++ +A LF++T K
Sbjct: 411 SILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEK 470
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
N +WN MI YG HG D +++LF ML G + + VT +SVL ACSH GLV +G EIF
Sbjct: 471 NTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIF 530
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
+M +Y ++ EHYAC+VD+L R+G++ +A + +R++P+ ++ G C IH
Sbjct: 531 HAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKD 590
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+LA E FE+ +V+LSNI + + + +A ++R+ +K++N+ K PG + +E
Sbjct: 591 TNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIE 650
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 243/543 (44%), Gaps = 58/543 (10%)
Query: 17 DCLLGKCMKSKALRQGKQVHALLCTN----DL-NIFSLKSKLVGVYAGCGDVNSARLVFD 71
+ LL K+ + HA L N DL + L KL V G AR +F
Sbjct: 9 NTLLALISKACTFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDV----GATRHARALFF 64
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+P P++F+ N ++ +F+ + Y L++ + FT++ + A D
Sbjct: 65 SVPKPDIFLFNVLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAISASP---DDNL 121
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G +HA A GF++++ V +AL+D+Y K + AR+VF M +RD V W +MI+G
Sbjct: 122 GMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVR 181
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAF----------FSRMT 241
D++V +F+ M +G+ + T ++ + A + F
Sbjct: 182 NCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYV 241
Query: 242 AEGFV---------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
G + PDLV++NA+ISGF+ + A+K F+ +LVSG
Sbjct: 242 LTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQ 301
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+ ++ T+ G++ G + + I + G + +AL +YS+ + AR
Sbjct: 302 RVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQ 361
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
LF+ + K VA+WNAMI Y + G+ + +I LF+ M+ N VT+ S+LSAC+ G
Sbjct: 362 LFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGA 421
Query: 401 VEKGLEIFRSMKERYGVKISKEHY--ACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSM 455
+ G + + +K + + + Y ++DM + G + EA +DL + N+M
Sbjct: 422 LSFGKSVHQLIKSK---NLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTM 478
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRKIM 513
G +HG D A+ + E +G +P LS + C+ G E + + M
Sbjct: 479 IF----GYGLHGYGDEALKLFNEMLHLGF-QPSSVTFLSVLYACSHAGLVREGDEIFHAM 533
Query: 514 KEK 516
K
Sbjct: 534 VNK 536
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/547 (31%), Positives = 282/547 (51%), Gaps = 40/547 (7%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVF 70
+ + + LL C + L +QVHA + L+ + S+ + + + + VF
Sbjct: 24 TTSSISTLLKACTTTSTL---EQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVF 80
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ + +P+ + N + + + + F M+ +KFT+ ++KAC + +K
Sbjct: 81 NGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVK 140
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
+G H A + G DV V +LID+Y KCG + AR+VF M ER+VVSWT+MI+GY
Sbjct: 141 EGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYA 200
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP--- 247
+ S + EA LF+ M E N ++NAII+ Y + GD +A F M V
Sbjct: 201 SFSDLVEARKLFDEMP----EKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTT 256
Query: 248 ------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
D+V W+A+ISG+ Q+ + NEA+K+F M +KP+
Sbjct: 257 MIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPD 316
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG---SALIDMYSKCGSLKDART 340
+ ++ A GS+++ + + V + IDV +ALIDM +KCGS+ A
Sbjct: 317 EFIMVSLMSACSQMGSLELAKWVDDYVRKSS--IDVHRAHVIAALIDMNAKCGSMDRATK 374
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
LFE +++ S+ +M+ HG ++ LF RML EG+ ++V +L+ACS GL
Sbjct: 375 LFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGL 434
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V++G F SMK Y + S +HYAC+VD+L R+GR+ EAY+LL+ +P+ GA
Sbjct: 435 VDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALL 494
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
C +H +L + ++ FE+ + +V+LSNI AA +W + LR M+E+ ++K
Sbjct: 495 GACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRK 554
Query: 521 QPGFSRV 527
PG S +
Sbjct: 555 IPGCSWI 561
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 175/539 (32%), Positives = 275/539 (51%), Gaps = 73/539 (13%)
Query: 29 LRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
L +GKQ+HA + D N F + + LV +YA C + A +F+ P+ +L W M
Sbjct: 154 LEKGKQIHAHAIKTQFDSNAFVV-TGLVDMYAKCKCILEAEYLFELAPDKRNHVL-WTAM 211
Query: 87 ASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ ++ G+ +AI F MR CN+FTF +L AC + G QVH + GF
Sbjct: 212 VTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGF 271
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+V VG+AL+DMYSKCG L +ARR+ M D VSW SMI G +EA+ LF
Sbjct: 272 GANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRI 331
Query: 205 MKLEGLEPNQFTY-----------------------------------NAIIASYARRGD 229
M L ++ ++FTY NA++ YA+RG
Sbjct: 332 MHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGY 391
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+ AF F +MT + D+++W ++++G + EAL+LF M + GI P+ + +
Sbjct: 392 FDYAFDVFEKMTDK----DVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAA 447
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
VL A ++ G+++HA + GL + ++L+ MY+KCG ++DA +F+ I++
Sbjct: 448 VLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQD 507
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
V +W A+I Y ++G R + H GLVE G F+
Sbjct: 508 VITWTALIVGYAQNG-----------------RGRD-----------HAGLVEHGRSYFQ 539
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
SM+E YG+K EHYAC++D+L RSG+++EA +LL Q+ + ++ A C +HG
Sbjct: 540 SMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNV 599
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+L FE+ + +V+LSN+ +A G+W EA R++MK + V K+PG S +E
Sbjct: 600 ELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIE 658
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 238/510 (46%), Gaps = 59/510 (11%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
++G YA G +N AR +F + P + + ++ G EA+ F M+ R N
Sbjct: 78 MIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPN 137
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
+FT+ VL+ C + ++KGKQ+HA A + F+++ V L+DMY+KC + A +F
Sbjct: 138 QFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFE 197
Query: 173 -GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-------- 223
+R+ V WT+M++GY +A+ F M+ EG+E NQFT+ +I+ +
Sbjct: 198 LAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACG 257
Query: 224 ---------------------------YARRGD-SNAAFAFFSRMTAEGFVPDLVTWNAM 255
Y++ GD SNA RM V D V+WN+M
Sbjct: 258 FGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNA-----RRMLETMEVDDPVSWNSM 312
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
I G + EAL LF+ M + +K + T VL ++ +H+L+ + G
Sbjct: 313 IVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGF 372
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+AL+DMY+K G A +FE K+V SW +++ +G + ++ LF
Sbjct: 373 EAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCE 432
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS-MKERYGVKISKEHYACVVDMLCRS 434
M G+ +++ + +VLSAC+ ++E G ++ + +K G +S ++ +V M +
Sbjct: 433 MRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDN--SLVSMYAKC 490
Query: 435 GRMVEA---YDLLR-QVPMYVTNSMAGAFRNGCNIHGRRDLA-VTMGEEFFE-----MGL 484
G + +A +D + Q + T + G +NG GR V G +F+ G+
Sbjct: 491 GCIEDANKVFDSMEIQDVITWTALIVGYAQNG---RGRDHAGLVEHGRSYFQSMEEVYGI 547
Query: 485 RK-PDGFVMLSNICAADGEWHEAENLRKIM 513
+ P+ + + ++ G+ EA+ L M
Sbjct: 548 KPGPEHYACMIDLLGRSGKLMEAKELLNQM 577
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 185/387 (47%), Gaps = 37/387 (9%)
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+ D N +I Y+ G L AR++F+ R ++W+S+ISGYC EA+ LF
Sbjct: 69 DRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWE 128
Query: 205 MKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFV------------- 246
M+ EG PNQFT+ +++ + +G A A ++ + FV
Sbjct: 129 MQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKC 188
Query: 247 -----------PD---LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
PD V W AM++G++Q+ ++A++ F+ M GI+ N T +L
Sbjct: 189 ILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILT 248
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A G + G ++H + R G +VF GSAL+DMYSKCG L +AR + E + + S
Sbjct: 249 ACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVS 308
Query: 353 WNAMI-GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
WN+MI GC + G+ + ++ LF M M+ +E T SVL+ S + + + S+
Sbjct: 309 WNSMIVGCV-RQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSV-HSL 366
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
+ G + K +VDM + G A+D+ ++ S + GC +G +
Sbjct: 367 IVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWT-SLVTGCVHNGSYEE 425
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICA 498
A+ + E MG+ PD V+ + + A
Sbjct: 426 ALRLFCEMRIMGIH-PDQIVIAAVLSA 451
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 40/154 (25%)
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD---------------------- 367
SKCG + DAR LF++ ++ SWN MIG Y G ++
Sbjct: 52 SKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLIS 111
Query: 368 ---------SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
++ELF M EG R N+ T SVL CS L+EKG +I + +K
Sbjct: 112 GYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQI-----HAHAIK 166
Query: 419 ISKEHYACV----VDMLCRSGRMVEAYDLLRQVP 448
+ A V VDM + ++EA L P
Sbjct: 167 TQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAP 200
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 285/542 (52%), Gaps = 50/542 (9%)
Query: 28 ALRQGKQVHALLCTNDL----NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+L GK+VH C + ++F + + LV +Y+ G ++ A VF +P +V N
Sbjct: 136 SLVDGKKVHC--CVFKMGFEDDVF-VAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNA 192
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
M+ GN A+G + M+ + + T + +L C D+ G +H + G
Sbjct: 193 MISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHG 252
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
++DV V NALI+MYSK G L A+ VF M RD+VSW S+I+ Y + A+ F+
Sbjct: 253 LDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFK 312
Query: 204 RMKLEGLEPNQFTY------------------------------------NAIIASYARR 227
M+L G+ P+ T NA++ YA+
Sbjct: 313 GMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKL 372
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM-LVSGIKPNNVT 286
G N A F ++ + D ++WN +++G+ Q+ +EA+ + M PN T
Sbjct: 373 GYMNCAHTVFDQLPRK----DTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGT 428
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EIT 345
++ A G++Q G +IHA + + L++DVF + LID+Y KCG L+DA +LF EI
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
R +V WNA+I G HG + +++LF+ ML E ++A+ +T +S+LSACSH GLV++G
Sbjct: 489 RDTSVP-WNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQ 547
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
+ F M++ YG+K S +HY C+VD+L R+G + +AY+L+R +P+ S+ GA + C I
Sbjct: 548 KCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKI 607
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
+G +L + E+ +V+LSNI A +W +R + +++ ++K PG+S
Sbjct: 608 YGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWS 667
Query: 526 RV 527
V
Sbjct: 668 SV 669
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 161/545 (29%), Positives = 266/545 (48%), Gaps = 57/545 (10%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
+ L C+ A K++HALL NI L +KL+ +Y GD++ +R FD I
Sbjct: 25 FNALFNSCVNVNA---TKKLHALLLVFGKSQNIV-LSTKLINLYVTHGDISLSRSTFDYI 80
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIG----YFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
N+F N ++ A G + EA+ FS+ R + +TF +LKACV L+D
Sbjct: 81 HKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD- 139
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
GK+VH +MGFE+DV V +L+ +YS+ G+L A +VF M +DV SW +MISG+
Sbjct: 140 --GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGF 197
Query: 190 CNVSKVDEAVVLFERMKLE-----------------------------------GLEPNQ 214
C A+ + RMK E GL+ +
Sbjct: 198 CQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDV 257
Query: 215 FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
F NA+I Y++ G A F +M V DLV+WN++I+ + Q+ + AL+ FKG
Sbjct: 258 FVSNALINMYSKFGRLQDAQMVFDQME----VRDLVSWNSIIAAYEQNNDPSTALRFFKG 313
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM-GLHIDVFTGSALIDMYSKCG 333
M + GI+P+ +TV + +I R I V R L DV G+AL++MY+K G
Sbjct: 314 MQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLG 373
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVL 392
+ A T+F+ K+ SWN ++ Y ++G+ +I+ + M E N+ T +S++
Sbjct: 374 YMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSII 433
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
A SH G +++G++I + + + + C++D+ + GR+ +A L ++P T
Sbjct: 434 PAYSHVGALQQGMKIHAKLIKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPR-DT 491
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENLRK 511
+ A IHGR + A+ + ++ ++ FV L + C+ G E +
Sbjct: 492 SVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFD 551
Query: 512 IMKEK 516
IM+++
Sbjct: 552 IMQKE 556
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/529 (32%), Positives = 276/529 (52%), Gaps = 25/529 (4%)
Query: 17 DCLLGKCMKSKALRQGK--QVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDK 72
D + M + RQG+ + ALL D N+ + + L G YA V+ AR +FD+
Sbjct: 69 DVVSWTAMVAAYARQGQLHEASALLHRPDARRNVVTWTALLSG-YARARRVDEARALFDR 127
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+P NV N M+ A A G A F M + +++I+L A V + +
Sbjct: 128 MPERNVVSWNTMLEAYASAGRMGAACALFDGMPVR----DAGSWNILLAALVRSGTMDEA 183
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+++ + E +V +I ++ G AR +F GM ER+VVSW +MISGY
Sbjct: 184 RRLF----ERMPERNVMSWTTMISGLARSGSADEARALFDGMPERNVVSWNAMISGYARN 239
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
++DEA+ LF M E + ++N +I + + D A F M ++V+W
Sbjct: 240 LRIDEALDLFMNMP----ERDVASWNIMITGFIQNKDLKKAQELFDEMPKR----NVVSW 291
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
M++G Q AL++F GMLV GI+PN VT G + AG + G+++H ++C+
Sbjct: 292 TTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICK 351
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
D F S+L+ +Y+KCG ++ AR +F+++ K+V SWN MI Y HG +I L
Sbjct: 352 TPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIAL 411
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
+E+M E + N+VT + +LSACSH GLV++GL IF M + + + EHY+C++D+
Sbjct: 412 YEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCS 471
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMA-GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
R+GR+ +A L+ + + T+S A GCN HG + E +
Sbjct: 472 RAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDLAARNLLEAEPDNAGTYT 531
Query: 492 MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE---FVEKE 537
+LSNI A+ G+W EA +R M ++ ++KQPG S +E N+ FV ++
Sbjct: 532 LLSNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIELANKVHVFVARD 580
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 174/382 (45%), Gaps = 42/382 (10%)
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V N I + G + ARR+F +RDVVSWT+M++ Y ++ EA L R
Sbjct: 39 VQDPNRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALLHR--- 95
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
N T+ A+++ YAR + A A F RM ++V+WN M+ +A + R
Sbjct: 96 PDARRNVVTWTALLSGYARARRVDEARALFDRMPER----NVVSWNTMLEAYASAGRMGA 151
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
A LF GM V N+ + ++++G + E L RM +V + + +I
Sbjct: 152 ACALFDGMPVRDAGSWNILLAALVRSGTMD-------EARRLFERMP-ERNVMSWTTMIS 203
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
++ GS +AR LF+ +NV SWNAMI Y ++ +D +++LF M E + + +
Sbjct: 204 GLARSGSADEARALFDGMPERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIM 263
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV------VDMLCRSGRMVEAY 441
+ + ++K E+F M +R V + C+ + + +G +V
Sbjct: 264 ITGFI----QNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLV--- 316
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP---DGFV--MLSNI 496
D +R P VT GA G N+ G ++ G++ +M + P D F+ L +
Sbjct: 317 DGIR--PNQVT--FLGAVDAGSNLAG-----LSEGQQVHQMICKTPFQFDNFIESSLMKL 367
Query: 497 CAADGEWHEAENLRKIMKEKNV 518
A GE A + + EK+V
Sbjct: 368 YAKCGEIRLARKVFDLSGEKDV 389
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/496 (32%), Positives = 266/496 (53%), Gaps = 20/496 (4%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N+ + + L G YA G V+ A +F ++P NV N M+ A +G +A F+ M
Sbjct: 97 NVVTWTALLSG-YARAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGM 155
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
+ +++I+L A V +I K +++ E +V ++ ++ G +
Sbjct: 156 PVR----DAGSWNILLAALVRSGNIDKARKLFDRMP----ERNVMAWTTMVAGIARSGSV 207
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
AR +F GM ER+VVSW +MISGY +DEA LF +M + ++N +I +
Sbjct: 208 NEARALFDGMPERNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIA----SWNIMITGF 263
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+ + A F +M ++VTW M++G+ QS + AL+LF GML+ GI+PN
Sbjct: 264 IQNKNLERAQELFDKMPRR----NVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQ 319
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
VT G + A + G+++H ++C+ D F S L+++Y+KCG + AR +F +
Sbjct: 320 VTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNL 379
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
++ K+V SWN MI Y HG+ +I L+E+M E G + N+VT + +LSACSH GLV++G
Sbjct: 380 SKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEG 439
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
L IF M + + + EHY C++D+ R+GR+ +A L+ + + ++++ A GCN
Sbjct: 440 LRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCN 499
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
HG + E + +L NI A+ G+W EA +R M ++ ++KQPG
Sbjct: 500 SHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGC 559
Query: 525 SRVEKRNE---FVEKE 537
S +E N+ FV ++
Sbjct: 560 SWIEVANKVHVFVSRD 575
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 208/455 (45%), Gaps = 63/455 (13%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
++ V A G V+ AR +FD+ P+ +V ++W + +A+
Sbjct: 39 NRRVAELAAAGRVSDARRLFDRTPDRDV--VSWTALVAAY-------------------- 76
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
AC G+L A+ + +V AL+ Y++ G + A +
Sbjct: 77 -----------ACQGML-----HDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEAL 120
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M ER+VVSW +M+ Y + +V +A LF M + + ++N ++A+ R G+
Sbjct: 121 FGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVR----DAGSWNILLAALVRSGNI 176
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+ A F RM +++ W M++G A+S NEA LF GM + N ++G
Sbjct: 177 DKARKLFDRMPER----NVMAWTTMVAGIARSGSVNEARALFDGMPERNVVSWNAMISGY 232
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
+ + E H L +M D+ + + +I + + +L+ A+ LF+ +NV
Sbjct: 233 ARN-------HMIDEAHDLFMKMPTR-DIASWNIMITGFIQNKNLERAQELFDKMPRRNV 284
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+W M+ Y + +++++LF ML +G+R N+VT + + ACS+ + +G ++ +
Sbjct: 285 VTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQ- 343
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHG 467
M + + + ++++ + G ++ A ++L ++ + N M A+ + HG
Sbjct: 344 MICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAH----HG 399
Query: 468 RRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADG 501
A+ + E+ E G + D +V L + C+ G
Sbjct: 400 VGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSG 434
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 19/276 (6%)
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
A + N V N + + G + ARR+F +RDVVSWT++++ Y + +A
Sbjct: 26 AAAVDVSNHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDA 85
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
LF+R N T+ A+++ YAR G + A A F RM ++V+WN M+
Sbjct: 86 RALFDR---PDARRNVVTWTALLSGYARAGRVDEAEALFGRMPER----NVVSWNTMLEA 138
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
+ S R +A LF GM V N+ + ++++G + + L RM +
Sbjct: 139 YTSSGRVGDACTLFNGMPVRDAGSWNILLAALVRSGNID-------KARKLFDRMP-ERN 190
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
V + ++ ++ GS+ +AR LF+ +NV SWNAMI Y ++ M+D + +LF +M
Sbjct: 191 VMAWTTMVAGIARSGSVNEARALFDGMPERNVVSWNAMISGYARNHMIDEAHDLFMKMPT 250
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
+ + + + + + +E+ E+F M R
Sbjct: 251 RDIASWNIMITGFIQNKN----LERAQELFDKMPRR 282
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 14/231 (6%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C L +G+QVH ++C + ++S L+ +YA CG++ AR VF+ +V
Sbjct: 329 CSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISW 388
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHAVA 139
N M+ A A G EAI + M+E Y+ N T+ +L AC GL+D +G ++
Sbjct: 389 NGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVD--EGLRIFEYM 446
Query: 140 TQMGFENDVSVGNA----LIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSK 194
+ + ++V + LID+ S+ G L A+R+ H + E W +++ G CN
Sbjct: 447 VK---DRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGG-CNSHG 502
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
+ L R LE N TY + YA G A S M G
Sbjct: 503 NESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGL 553
>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Glycine max]
Length = 722
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/532 (31%), Positives = 282/532 (53%), Gaps = 43/532 (8%)
Query: 32 GKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIP---NPNVFMLNWMVMA 87
G+ VH+++ + L S+ + L+ +Y CG V A VF++ + + N M+
Sbjct: 196 GRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNAMIDG 255
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
A ++A F M++ + + TF V+ +C L + G Q + A +MGF
Sbjct: 256 FASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSSL---RAGCQAQSQAIKMGFVGC 312
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V+V NA++ MYS G + + +F GM ERDVVSW M+S + + +EA++ + +M+
Sbjct: 313 VAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAMLSYLKMRR 372
Query: 208 EGLEPNQFTY-------------------------------NAIIASYARRGDSNAAFAF 236
EG+EP++FTY NA++++Y R G AF
Sbjct: 373 EGIEPDEFTYGSLLAATDSLQVVEMIHSLLCKSGLVKIEVLNALVSAYCRHGKIKRAFQI 432
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
FS + + L++WN++ISGF + + L+ F +L + +KPN +++ VL
Sbjct: 433 FSGVPYK----SLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLSICSS 488
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
++ G+++H + R G +V G+AL+ MY+KCGSL A +F+ ++ +WNA+
Sbjct: 489 MSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAI 548
Query: 357 IGCYGKHGMVDSSIELFERM-LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
I Y +HG + ++ FE M G++ ++ T SVLSACSH GLV+ G+ IF +M + Y
Sbjct: 549 ISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKVY 608
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTM 475
G S +H++C+VD+L RSG + EA +++ +++ + + C HG L T+
Sbjct: 609 GFVPSVDHFSCIVDLLGRSGYLDEAERVIKSGYFGAHSNICWSLFSACAAHGNLGLGRTV 668
Query: 476 GEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
E P +V+LSNICAA G+W EA NLR++M+E KQPG S +
Sbjct: 669 ARLILERDHNNPSVYVLLSNICAAAGQWEEAANLREMMREFGTIKQPGCSWI 720
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 227/488 (46%), Gaps = 48/488 (9%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ L+ A V A VFD IP ++ + N ++ A GN A G F M + +
Sbjct: 116 TTLLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVK 175
Query: 111 CNKFTFSIVLKAC-VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
+K+TF+ +L C + L D G+ VH+V + GF SV N+LI MY KCG + A
Sbjct: 176 ADKYTFATMLSLCSLELFDY--GRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACE 233
Query: 170 VFHGMFE---RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA- 225
VF E RD VS+ +MI G+ +V + ++A ++F M+ +P + T+ ++++S +
Sbjct: 234 VFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSS 293
Query: 226 -RRG-----------------DSNAAFAFFS--------RMTAEGFVP-DLVTWNAMISG 258
R G +NA +S + EG D+V+WN M+S
Sbjct: 294 LRAGCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSM 353
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
F Q E EA+ + M GI+P+ T +L A T S+Q+ IH+L+C+ GL +
Sbjct: 354 FLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAA---TDSLQVVEMIHSLLCKSGL-VK 409
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+ +AL+ Y + G +K A +F K++ SWN++I + +G +E F +L
Sbjct: 410 IEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLS 469
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
++ N +L VLS CS + G ++ + R+G +V M + G +
Sbjct: 470 TQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYIL-RHGFSSEVSLGNALVTMYAKCGSLD 528
Query: 439 EA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVML 493
+A +D + + N++ A+ HGR + AV E KPD F +
Sbjct: 529 KALRVFDAMVERDTITWNAIISAYAQ----HGRGEEAVCCFEAMQTSPGIKPDQATFTSV 584
Query: 494 SNICAADG 501
+ C+ G
Sbjct: 585 LSACSHAG 592
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 161/326 (49%), Gaps = 12/326 (3%)
Query: 26 SKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+ +L+ + +H+LLC + L + + LV Y G + A +F +P ++ N ++
Sbjct: 389 TDSLQVVEMIHSLLCKSGLVKIEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSII 448
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
G+ + + FS + + N ++ S+VL C + + GKQVH + GF
Sbjct: 449 SGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFS 508
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
++VS+GNAL+ MY+KCG L A RVF M ERD ++W ++IS Y + +EAV FE M
Sbjct: 509 SEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAM 568
Query: 206 KLE-GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT-AEGFVPDLVTWNAMISGFAQSK 263
+ G++P+Q T+ +++++ + G + F M GFVP + ++ ++ +S
Sbjct: 569 QTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSG 628
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
+EA ++ K G N + A G++ +GR V R+ L D S
Sbjct: 629 YLDEAERVIKSGYF-GAHSN--ICWSLFSACAAHGNLGLGRT----VARLILERDHNNPS 681
Query: 324 ALIDMYSKC---GSLKDARTLFEITR 346
+ + + C G ++A L E+ R
Sbjct: 682 VYVLLSNICAAAGQWEEAANLREMMR 707
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 46/268 (17%)
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGL-LCSARRVFHGMFERDVVSWTSMISGYCNV 192
Q+HA+A + G V N+L+ +Y+K L S + F + D SWT+++S +
Sbjct: 66 QLHALAVRTGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKL 125
Query: 193 SKVDEAVVLFERMKLEGLEPNQFT-YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
V+ A+ +F +G+ +NA+I A +G+ + AF F M G D T
Sbjct: 126 DSVEHALKVF-----DGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYT 180
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
+ M+S +L+LF GR +H++V
Sbjct: 181 FATMLSLC--------SLELF----------------------------DYGRHVHSVVI 204
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR---IKNVASWNAMIGCYGKHGMVDS 368
+ G ++LI MY KCG + DA +FE ++ S+NAMI + +
Sbjct: 205 KSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNAMIDGFASVERSED 264
Query: 369 SIELFERMLEEGMRANEVTLISVLSACS 396
+ +F M + EVT +SV+S+CS
Sbjct: 265 AFLIFRDMQKGCFDPTEVTFVSVMSSCS 292
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 7/160 (4%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C A+ GKQVH + + + SL + LV +YA CG ++ A VFD +
Sbjct: 479 LSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMV 538
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKAC--VGLLDIKK 131
+ N ++ A A G +EA+ F M+ + ++ TF+ VL AC GL+D
Sbjct: 539 ERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVD--D 596
Query: 132 GKQVHAVATQM-GFENDVSVGNALIDMYSKCGLLCSARRV 170
G ++ ++ GF V + ++D+ + G L A RV
Sbjct: 597 GIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERV 636
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 41/199 (20%)
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N M++ A+S + ++LKLF S P++ ++ + A G ++HAL R
Sbjct: 15 NHMLAALARSNQHTQSLKLFVHAH-SSFTPDHYILSTAITAAANARRAAFGAQLHALAVR 73
Query: 313 MGL----HI----------------------------DVFTGSALIDMYSKCGSLKDART 340
GL H+ D ++ + L+ +K S++ A
Sbjct: 74 TGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKLDSVEHALK 133
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F+ ++A WNA+I + G D + LF M + G++A++ T ++LS CS
Sbjct: 134 VFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATMLSLCS---- 189
Query: 401 VEKGLEIFRSMKERYGVKI 419
LE+F + + V I
Sbjct: 190 ----LELFDYGRHVHSVVI 204
>gi|356518777|ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 737
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 275/535 (51%), Gaps = 57/535 (10%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVF 70
SV L+ KC+ ++ ++ VH L L + L + L+ Y+ CG SA F
Sbjct: 9 SVEKYSFLISKCITARRVKLANAVHGHLIKTALFFDAFLANGLIDAYSKCGCEESAHKTF 68
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+PN N ++ + TG F EA F M + N +++ ++ + L
Sbjct: 69 GDLPNKTTRSWNTLISFYSKTGFFDEAHNLFDKMPQR----NVVSYNSLISGNLQWL--- 121
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
+QVH VA +G E +V + NALID Y KCG + VF M ER+VVSWTSM+
Sbjct: 122 --RQVHGVAVIVGMEWNVILNNALIDAYGKCGEPNLSFSVFCYMPERNVVSWTSMV---- 175
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV 250
+Y R + A F M V + V
Sbjct: 176 -------------------------------VAYTRACRLDEACRVFKDMP----VKNTV 200
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
+W A+++GF ++ +EA +FK ML G++P+ T V+ A I G+++H +
Sbjct: 201 SWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFVSVIDACAQEALIGRGKQVHGQI 260
Query: 311 CR---MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
R G +V+ +ALIDMY+KCG +K A LFE+ +++V +WN +I + ++G +
Sbjct: 261 IRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFEMAPMRDVVTWNTLITGFAQNGHGE 320
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
S+ +F RM+E + N VT + VLS C+H GL +GL++ M+ +YGVK EHYA +
Sbjct: 321 ESLAVFRRMIEAKVEPNHVTFLGVLSGCNHAGLDNEGLQLVDLMERQYGVKPKAEHYALL 380
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMA--GAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
+D+L R R++EA L+ +VP + N +A GA C +HG DLA E+ FE+
Sbjct: 381 IDLLGRRNRLMEAMSLIEKVPDGIKNHIAVWGAVLGACRVHGNLDLARKAAEKLFELEPE 440
Query: 486 KPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFVEKE 537
+VML+NI AA G+W A+ +R +MKE+ ++K+P SR+E RN EFV K+
Sbjct: 441 NTGRYVMLANIYAASGKWGGAKRIRNVMKERCLEKEPACSRIELRNARHEFVAKD 495
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/579 (29%), Positives = 288/579 (49%), Gaps = 70/579 (12%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ C R GKQ+HA L+ ++ + L SKL+ Y+ G + A VF KIP N
Sbjct: 9 LIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKN 68
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLM---REFIYRCNKFTFSIVLKACVGLL-DIKKGK 133
+F N ++++ + + FS + + ++FT + LKA L + K
Sbjct: 69 IFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAK 128
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+VH+ + G E D+ V NALI YS+C L AR +F M ERD+VSW +M++GY
Sbjct: 129 EVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGG 188
Query: 194 KVDEAVVLFERMKLEGLE--PNQFT----------------------------------- 216
++ LF R+ L LE PN T
Sbjct: 189 SYEKCKELF-RVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSL 247
Query: 217 YNAIIASYARRGDSNAAFAFFSRM---------------TAEGFV------------PDL 249
+NA+I YA+ G + A F M GFV P L
Sbjct: 248 WNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQERPRL 307
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
TWNA+ISG Q+ R+ A+ +F+ M G +PN VT+ +L +++ G+EIH
Sbjct: 308 PTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGY 367
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
R +++ +A+ID Y+KCG L A+ +F+ + +++ +W ++I Y HG + +
Sbjct: 368 AIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVA 427
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+ LF ML G++ ++VT SVL+AC+H G +++ +IF + YG++ EHYAC+V
Sbjct: 428 LSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVG 487
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
+L R+G++ +A + + ++P+ T + GA NG ++ G +L + + FE+
Sbjct: 488 VLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGN 547
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+V+++N+ + G W +A+ +R +MKE ++K PG S +E
Sbjct: 548 YVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIE 586
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 208/479 (43%), Gaps = 88/479 (18%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
N + +++ C L + GKQ+HA D +G+ LI YSK G + A VF
Sbjct: 2 NYSAYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVF 61
Query: 172 HGMFERDVVSWTSMISGY------CNVSKVDEAVV-----------------------LF 202
+ +++ SW +++ Y ++ K+ ++V LF
Sbjct: 62 GKIPRKNIFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLF 121
Query: 203 ERMKL----------EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
L GLE + F NA+I Y+R + A F RM D+V+W
Sbjct: 122 SNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPER----DIVSW 177
Query: 253 NAMISGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
NAM++G++Q + +LF+ ML S +KPN +T VLQA + + G E+H V
Sbjct: 178 NAMLAGYSQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVN 237
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
+ +DV +A+I +Y+KCGSL AR LFE K+ ++ +MI Y HG V+ +++
Sbjct: 238 ESQIKMDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMD 297
Query: 372 LF---ER----------------------------MLEEGMRANEVTLISVLSACSHGGL 400
LF ER M G R N VTL S+L SH
Sbjct: 298 LFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFST 357
Query: 401 VEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMA 456
++ G EI +++ Y I ++D + G + A +D ++ + S+
Sbjct: 358 LKGGKEIHGYAIRNTYDRNIYVA--TAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSII 415
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRKIM 513
A+ +HG ++A+++ E G+ +PD S + CA GE EA + ++
Sbjct: 416 SAYA----VHGDANVALSLFYEMLTNGI-QPDQVTFTSVLAACAHSGELDEAWKIFNVL 469
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 169/550 (30%), Positives = 283/550 (51%), Gaps = 61/550 (11%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C + +GK +H L D + FS + LV +YA GD+ A VF+KI
Sbjct: 261 LSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANA-LVDMYAKVGDLADAISVFEKI 319
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P++ N ++ + ++A+ M+ +
Sbjct: 320 KQPDIVSWNAVIAGCVLHEHHEQALELLGQMK---------------------------R 352
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H+ +M E+D+ V L+DMYSKC LL AR F+ + E+D+++W ++ISGY
Sbjct: 353 QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYW 412
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYA----------------RRGDSNAAFAFF 237
+ EA+ LF M EG+ NQ T + I+ S A + G + +
Sbjct: 413 EDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVN 472
Query: 238 S---------------RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
S R+ E + DLV++ +MI+ +AQ + EALKLF M +KP
Sbjct: 473 SLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKP 532
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ + +L A + + G+++H + + G +D+F G++L++MY+KCGS+ DA F
Sbjct: 533 DRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAF 592
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ + SW+AMIG +HG +++LF +ML+EG+ N +TL+SVL AC+H GLV
Sbjct: 593 SELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVT 652
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+ F SM+E +G K +EHYAC++D+L R+G++ EA +L+ ++P S+ GA
Sbjct: 653 EAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA 712
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
IH +L E F + K V+L+NI A+ G+W +R++M++ V+K+P
Sbjct: 713 ARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEP 772
Query: 523 GFSRVEKRNE 532
G S +E +++
Sbjct: 773 GMSWIEVKDK 782
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 150/507 (29%), Positives = 261/507 (51%), Gaps = 37/507 (7%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVF 70
SV+Y LL +C +K+LR G Q+HA + + L + S+++ L+ +Y+ C AR +
Sbjct: 56 SVSYSK-LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLV 114
Query: 71 DKIPNPNVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
D+ P+ +++W + S + N A+ F M +CN+FTFS VLKAC + D
Sbjct: 115 DESSEPD--LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKD 172
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
++ GKQVH V GFE DV V N L+ MY+KC ++R+F + ER+VVSW ++ S
Sbjct: 173 LRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSC 232
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
Y EAV LF M L G++PN+F+ ++++ + DS+ + G+ D
Sbjct: 233 YVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWD 292
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL------QAGGLTGSIQI 302
+ NA++ +A+ +A+ +F+ + I N + G + QA L G Q+
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLG--QM 350
Query: 303 GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGK 362
R++H+ + +M + D+F L+DMYSKC L+DAR F + K++ +WNA+I Y +
Sbjct: 351 KRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQ 410
Query: 363 HGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
+ ++ LF M +EG+ N+ TL ++L + + GL++ ++ +G+ +
Sbjct: 411 YWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTA-------GLQVVHVCRQVHGLSVKSG 463
Query: 423 HYA------CVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAV 473
++ ++D + + +A + + + SM A+ +G+ + A+
Sbjct: 464 FHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQ----YGQGEEAL 519
Query: 474 TMGEEFFEMGLRKPDGFV--MLSNICA 498
+ E +M L KPD FV L N CA
Sbjct: 520 KLFLEMQDMEL-KPDRFVCSSLLNACA 545
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P +V+ + +L T S++ G +IHA + + GL D + LI++YSKC AR L
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS----- 396
+ + ++ SW+A+I Y ++G+ ++ F M G++ NE T SVL ACS
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173
Query: 397 ------HGGLVEKGLE 406
HG +V G E
Sbjct: 174 RIGKQVHGVVVVSGFE 189
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 280/528 (53%), Gaps = 49/528 (9%)
Query: 46 IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMR 105
I S+++ L+ +Y D+ AR +FD++ +V + W VM + + +G + R
Sbjct: 183 ISSVQNSLLSMYVD-ADMECARELFDEMHEKDV--IAWSVMIGGYLQWEEPQVG-LQMFR 238
Query: 106 EFIY----RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC 161
+ + + VLKAC D+ G+ VH + GF+ D+ V N+LIDMYSKC
Sbjct: 239 KMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKC 298
Query: 162 GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE------------- 208
SA +VF+ + +R+ VSW SM+SG+ EA L M+ E
Sbjct: 299 KDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNIL 358
Query: 209 ----------------------GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
G E N+ +A+I +YA+ A+ F+RM
Sbjct: 359 QICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRR--- 415
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
D+V+W+ MISGFA + +EA+ +++ M +KPN +T+ +L+A +T ++ +
Sbjct: 416 -DVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWA 474
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H + R G +V G+A++DMYSKCG + +R F+ +KN+ +W+AMI YG +G+
Sbjct: 475 HGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLA 534
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
++ LF M G++ N VT +SVL+ACSHGGLVE+GL +F+SM + G++ EHY+C
Sbjct: 535 HEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSC 594
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTN--SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
+VDML R+G++ A ++++ +P + N S+ G+ + C +G +L E+
Sbjct: 595 MVDMLGRAGKLDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEP 654
Query: 485 RKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
G+++ S++ AADG W +A +R + KEK V+ G+S V N+
Sbjct: 655 SNSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNK 702
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 145/545 (26%), Positives = 249/545 (45%), Gaps = 69/545 (12%)
Query: 30 RQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNP-NVFMLNWMVMA 87
R GK +HA L + F S+ + ++G Y CGD + A VF+ + + N ++
Sbjct: 64 RHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHG 123
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
G + +F+ R + N T +V++AC L G +H + GF
Sbjct: 124 HLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAI 183
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
SV N+L+ MY + C AR +F M E+DV++W+ MI GY + + +F +M L
Sbjct: 184 SSVQNSLLSMYVDADMEC-ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVL 242
Query: 208 -EGLEPNQ-----------------------------------FTYNAIIASYARRGDSN 231
G+EP+ F N++I Y++ D+
Sbjct: 243 VPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAG 302
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
+AF F+ ++ + V+WN+M+SGF ++ +EA L M ++ + VT+ +L
Sbjct: 303 SAFKVFNEISQR----NNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNIL 358
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
Q + IH ++ R G + SALID Y+KC ++ A +F R ++V
Sbjct: 359 QICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVV 418
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SW+ MI + G D +I +++ M + ++ N +T+I++L ACS E+ RS
Sbjct: 419 SWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTA------ELKRS- 471
Query: 412 KERYGVKISKEHYA-------CVVDMLCRSGRMV---EAYDLLRQVPMYVTNSMAGAFRN 461
K +GV I ++ +A VVDM + G ++ A+D L + ++M A+
Sbjct: 472 KWAHGVAI-RQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAY-- 528
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRKIMKEKNVQ 519
++G A+ + E GL KP+ LS + C+ G E +L K M ++ +
Sbjct: 529 --GMNGLAHEALALFAEMKRHGL-KPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQE-LG 584
Query: 520 KQPGF 524
+PGF
Sbjct: 585 LEPGF 589
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 205/442 (46%), Gaps = 48/442 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C S+ + G+ VH L+ D ++F +++ L+ +Y+ C D SA VF++I
Sbjct: 256 VLKACASSRDVCTGRLVHGLVIHRGFDCDLF-VENSLIDMYSKCKDAGSAFKVFNEISQR 314
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N N M+ N+ EA S MR+ ++ T +L+ C + K +H
Sbjct: 315 NNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIH 374
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
V + G E + V +ALID Y+KC L+ A VF M RDVVSW++MISG+ + K D
Sbjct: 375 CVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPD 434
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
EA+ +++ M + ++PN T A++
Sbjct: 435 EAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVV 494
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y++ G+ A+ F ++ + ++VTW+AMI+ + + +EAL LF M G+K
Sbjct: 495 DMYSKCGEILASRRAFDQLA----LKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLK 550
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
PN VT VL A G ++ G + ++V +GL S ++DM + G L A
Sbjct: 551 PNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIE 610
Query: 341 LFEIT--RIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+ + +KN AS W +++ +G+ + E R+LE +N + S +
Sbjct: 611 VIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELE-PSNSAGYLVASSMYAA 669
Query: 398 GGLVEKGLEIFRSMKERYGVKI 419
GL + I R + + GVK+
Sbjct: 670 DGLWDDAARI-RVLAKEKGVKV 690
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 159/351 (45%), Gaps = 36/351 (10%)
Query: 82 NWM--VMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
NW+ + S+ G +QE + Y + + I + F +LKA L + GK +HA
Sbjct: 14 NWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAW-SFLSHRHGKSLHAC 72
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF-ERDVVSWTSMISGYCNVSKVDE 197
+ GF++ S+GN+++ Y +CG A VF+ M RD VSW +I G+ + +
Sbjct: 73 LIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVA 132
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP---------- 247
+ F ++ G EPN T +I + G + + GF
Sbjct: 133 GLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLS 192
Query: 248 --------------------DLVTWNAMISGFAQSKRENEALKLFKGM-LVSGIKPNNVT 286
D++ W+ MI G+ Q + L++F+ M LV GI+P+ V
Sbjct: 193 MYVDADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVV 252
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ VL+A + + GR +H LV G D+F ++LIDMYSKC A +F
Sbjct: 253 MVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEIS 312
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+N SWN+M+ + + + L M +E + +EVTL+++L C +
Sbjct: 313 QRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKY 363
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 113/271 (41%), Gaps = 31/271 (11%)
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV-TGVLQAGG 295
FS + + +P+ W I + + + E + + + +GI+ +V+V +L+A
Sbjct: 3 FSAIVSGSKLPN---WILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWS 59
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFT--GSALIDMYSKCGSLKDARTLF-EITRIKNVAS 352
S + G+ +HA + + G D FT G++++ Y +CG A +F + R ++ S
Sbjct: 60 FL-SHRHGKSLHACLIKQGF--DSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVS 116
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC-----SHGGLVEKGLEI 407
WN +I + +G + + + F G N T++ V+ AC H GL+ G I
Sbjct: 117 WNILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLI 176
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF----RNGC 463
V+ S DM C E +D + + + + M G +
Sbjct: 177 KSGFWAISSVQNSLLSMYVDADMECAR----ELFDEMHEKDVIAWSVMIGGYLQWEEPQV 232
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
+ R + + G E PDG VM+S
Sbjct: 233 GLQMFRKMVLVPGIE--------PDGVVMVS 255
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/591 (30%), Positives = 297/591 (50%), Gaps = 73/591 (12%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGC--GD 62
P LS L C K++ KQ+HA + L +I SL +KL+ G+
Sbjct: 31 PTTGLSQQSCISYLKSC---KSMTHLKQIHAQIFRVGLHQDIVSL-NKLMAFCTDPFNGN 86
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
+N A +F I P + + N ++ A A GN++ + FS +RE + FT+ V KA
Sbjct: 87 LNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKA 146
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
L ++ K +++ + T+ G E D V N+LIDMY++ L + +F M +RDV+SW
Sbjct: 147 IGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISW 206
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLE-GLEPNQFTY------------------------ 217
MISGY + ++A+ +F RM+ E GL P++ T
Sbjct: 207 NVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVR 266
Query: 218 ----------NAIIASYARRGDSNAAFAFFSRMTAEGFV--------------------- 246
NA++ Y + G + A A F M ++ +
Sbjct: 267 DNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEAREL 326
Query: 247 ----P--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI 300
P D+V W AMI+G+ Q R +EA+ LF+ M + +KP+ V +L TG+I
Sbjct: 327 FEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAI 386
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY 360
+ G+ IH + + ID G+ALI+MY+KCG ++ A +F R+K+ ASW ++I
Sbjct: 387 EQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGL 446
Query: 361 GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKIS 420
+G ++ELF +M + G+R +++T I VLSACSHGGLVE+G + F SM+ Y +K
Sbjct: 447 AMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPK 506
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
EHY C+VD+L R+G + EA +L++++P +T + G+ + C I+G ++ + +
Sbjct: 507 VEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAK 566
Query: 478 EFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ + +L+NI A W + +R+ MK+ V+K PG S +E
Sbjct: 567 QLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIE 617
>gi|91805879|gb|ABE65668.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 520
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 280/536 (52%), Gaps = 58/536 (10%)
Query: 6 FPI-NNLS----VNYLDCLLGKCMKSKALRQGKQVHALLCTN----DLNIFSLKSKLVGV 56
FP+ N+S Y+ L + + S A + GK++HA + DLNI KL+ +
Sbjct: 22 FPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNI---SIKLLIL 78
Query: 57 YAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTF 116
+ CG ++ AR VFD++P P + N+M+ G +E + M + + +T
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 117 SIVLKAC-----VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
S+VLKA +L + VHA + E D + AL+D Y K G L SAR VF
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M + +VV TSMISGY N V++A +F K
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK------------------------- 233
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQS-KRENEALKLFKGMLVSGIKPNNVTVTGV 290
V D+V +NAM+ GF++S + ++ ++ M +G PN T V
Sbjct: 234 --------------VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
+ A + S ++G+++HA + + G++ + GS+L+DMY+KCG + DAR +F+ + KNV
Sbjct: 280 IGACAVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV 339
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SW +MI YGK+G + ++ELF RM E + N VT + LSACSH GLV+KG EIF S
Sbjct: 340 FSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFES 399
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M+ Y +K EHYAC+VD++ R+G + +A++ R +P + + A + CN+HG +
Sbjct: 400 MQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVE 459
Query: 471 LAVTMGEEFFEMGL-RKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
LA E F++ ++P ++ LSN+ A++ +W +R++MK + + K G S
Sbjct: 460 LASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
>gi|297798072|ref|XP_002866920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312756|gb|EFH43179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 245/468 (52%), Gaps = 45/468 (9%)
Query: 104 MREFIYRC--------NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALI 155
M F+YR + FTF V KAC I++GKQ+H T+MGF +D+ V N+L+
Sbjct: 89 MTIFVYRVFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGTVTKMGFYDDIYVQNSLV 148
Query: 156 DMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF 215
Y CG +A +VF M RDVVSWT +I+G+ EA+ F +M +EPN
Sbjct: 149 HFYGVCGESRNACKVFDQMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLA 205
Query: 216 TYNAIIASYARRG----------------------DSNAAFAFFSR-------MTAEGFV 246
TY + S R G NA + + MT G +
Sbjct: 206 TYVCALVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMTVFGEL 265
Query: 247 --PDLVTWNAMISGFAQSKRENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSIQIG 303
D V+WN+MISG +R NEA++LF M SGIKP+ +T VL A G++ G
Sbjct: 266 QKKDKVSWNSMISGLVHCERSNEAIELFSMMQTSSGIKPDGHILTSVLSACASLGAVDYG 325
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
R +H V G+ D G+A++DMY+KCG ++ A +F R KNV +WNA++G H
Sbjct: 326 RWVHEYVLSAGIKWDTHIGTAIVDMYAKCGYIETALKIFNGIRRKNVFTWNALLGGLAIH 385
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER-YGVKISKE 422
G S+ FE M++ G + N VT +++L+AC H GLV++G F MK R Y + E
Sbjct: 386 GHGHESLRYFEEMVKLGFKPNLVTFLAILNACCHTGLVDEGRRYFHKMKTREYNLSPKLE 445
Query: 423 HYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR-RDLAVTMGEEFFE 481
HY C++D+ CR+G + EA +L++ +P+ + GA + C G +L + + F E
Sbjct: 446 HYGCLIDLFCRAGLLDEALELIKAMPVKPDVRICGAVLSACKSRGTLMELPKEILDSFLE 505
Query: 482 MGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEK 529
M +V+LSNI AA+ W + +R++MK K + K PG S +EK
Sbjct: 506 MEFEDSGVYVLLSNIFAANRRWDDVSRIRRLMKVKGISKVPGSSSIEK 553
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 183/396 (46%), Gaps = 46/396 (11%)
Query: 23 CMKSKALRQGKQVHALLCT----NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
C K +R+GKQ+H + +D+ + ++ LV Y CG+ +A VFD++P +V
Sbjct: 116 CGKFSGIREGKQIHGTVTKMGFYDDIYV---QNSLVHFYGVCGESRNACKVFDQMPVRDV 172
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
++ TG ++EA+ FS M + + ++V VG L + KG +H +
Sbjct: 173 VSWTGIITGFTRTGLYKEALDTFSKM-DVEPNLATYVCALVSSGRVGCLSLGKG--IHGL 229
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ + GNALIDMY KC L A VF + ++D VSW SMISG + + +EA
Sbjct: 230 ILKRASLISLETGNALIDMYVKCEQLSDAMTVFGELQKKDKVSWNSMISGLVHCERSNEA 289
Query: 199 VVLFERMKL-EGLEPNQFTYNAIIASYARRG-------------------DSNAAFAFFS 238
+ LF M+ G++P+ +++++ A G D++ A
Sbjct: 290 IELFSMMQTSSGIKPDGHILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGTAIVD 349
Query: 239 RMTAEGFV------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G++ ++ TWNA++ G A +E+L+ F+ M+ G KPN VT
Sbjct: 350 MYAKCGYIETALKIFNGIRRKNVFTWNALLGGLAIHGHGHESLRYFEEMVKLGFKPNLVT 409
Query: 287 VTGVLQAGGLTGSIQIGRE-IHALVCR-MGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
+L A TG + GR H + R L + LID++ + G L +A L +
Sbjct: 410 FLAILNACCHTGLVDEGRRYFHKMKTREYNLSPKLEHYGCLIDLFCRAGLLDEALELIKA 469
Query: 345 TRIK-NVASWNAMI-GCYGKHGMVDSSIELFERMLE 378
+K +V A++ C + +++ E+ + LE
Sbjct: 470 MPVKPDVRICGAVLSACKSRGTLMELPKEILDSFLE 505
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 165/383 (43%), Gaps = 54/383 (14%)
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------- 217
S+ +++S Y K + ++ G P+ FT+
Sbjct: 73 SYNTLLSSYAVCDKPRMTIFVYRVFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGTV 132
Query: 218 ------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
N+++ Y G+S A F +M V D+V+W +I+GF ++
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFDQMP----VRDVVSWTGIITGFTRTGLY 188
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EAL F M ++PN T L + G G + +G+ IH L+ + I + TG+AL
Sbjct: 189 KEALDTFSKM---DVEPNLATYVCALVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM-LEEGMRAN 384
IDMY KC L DA T+F + K+ SWN+MI + +IELF M G++ +
Sbjct: 246 IDMYVKCEQLSDAMTVFGELQKKDKVSWNSMISGLVHCERSNEAIELFSMMQTSSGIKPD 305
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---Y 441
L SVLSAC+ G V+ G + + G+K +VDM + G + A +
Sbjct: 306 GHILTSVLSACASLGAVDYGRWVHEYVLSA-GIKWDTHIGTAIVDMYAKCGYIETALKIF 364
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAA 499
+ +R+ ++ N++ G G IHG ++ EE ++G KP+ F+ + N C
Sbjct: 365 NGIRRKNVFTWNALLG----GLAIHGHGHESLRYFEEMVKLGF-KPNLVTFLAILNACCH 419
Query: 500 DGEWHEAENLRKIMKEKNVQKQP 522
G E MK + P
Sbjct: 420 TGLVDEGRRYFHKMKTREYNLSP 442
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 130/283 (45%), Gaps = 25/283 (8%)
Query: 231 NAAFAFFSRMTAEGF--VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
+A FA +S + V ++N ++S +A + + +++ + +G P+ T
Sbjct: 51 SADFATYSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRMTIFVYRVFVSNGFSPDMFTFP 110
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
V +A G I+ G++IH V +MG + D++ ++L+ Y CG ++A +F+ ++
Sbjct: 111 PVFKACGKFSGIREGKQIHGTVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFDQMPVR 170
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+V SW +I + + G+ +++ F +M + N T + L + G + G I
Sbjct: 171 DVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCALVSSGRVGCLSLGKGIH 227
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL---LRQVPMYVTNSMAGAFRNGCNI 465
+ +R + IS E ++DM + ++ +A + L++ NSM +
Sbjct: 228 GLILKRASL-ISLETGNALIDMYVKCEQLSDAMTVFGELQKKDKVSWNSMISGL-----V 281
Query: 466 HGRRDLAVTMGEEFFEM-----GLRKPDGFVMLS--NICAADG 501
H R E F M G+ KPDG ++ S + CA+ G
Sbjct: 282 HCERS---NEAIELFSMMQTSSGI-KPDGHILTSVLSACASLG 320
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C A+ G+ VH + + + + + + +V +YA CG + +A +F+ I
Sbjct: 309 LTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGTAIVDMYAKCGYIETALKIFNGIR 368
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKG 132
NVF N ++ A G+ E++ YF M + ++ N TF +L AC GL+D +
Sbjct: 369 RKNVFTWNALLGGLAIHGHGHESLRYFEEMVKLGFKPNLVTFLAILNACCHTGLVDEGR- 427
Query: 133 KQVHAVAT-QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
+ H + T + + LID++ + GLL A + M
Sbjct: 428 RYFHKMKTREYNLSPKLEHYGCLIDLFCRAGLLDEALELIKAM 470
>gi|347954466|gb|AEP33733.1| chlororespiratory reduction 21, partial [Lepidium sativum]
Length = 805
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/528 (29%), Positives = 274/528 (51%), Gaps = 6/528 (1%)
Query: 20 LGKCMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
+ C+ + A + +GKQ HA+ N L + + L + ++ Y G + A ++FD+I
Sbjct: 255 VSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDRII 314
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
++ N ++ G +A+ LMR R + T S ++ A ++ GK+
Sbjct: 315 GKDIVTWNLLISGYVQQGLVDDAMYMCKLMRLENLRYDSVTLSTLMSAAARTQNLNLGKE 374
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
V + + FE+++ + ++ +DMY+KCG + A++VF E+D++ W ++++ Y +
Sbjct: 375 VQCYSIRHSFESEIVLASSTVDMYAKCGSIVDAKKVFESTAEKDLILWNTLLAAYADSGL 434
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
EA+ LF M LE + PN T+N+II S+ R G + A F +M + G P+L++W
Sbjct: 435 SGEALKLFYDMLLESVPPNIITWNSIILSFLRNGQVDEAKEMFLQMQSSGIFPNLISWTT 494
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M++G+ Q+ EA+ + M SG++PN T++ L A S+ GR IH + R
Sbjct: 495 MMNGWVQNGCSEEAIIFLRKMQESGLRPNAFTISVALSACTHLVSLNFGRSIHGYIIRNF 554
Query: 315 LH-IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
H V ++L+D+Y+KCG + A +F + NAMI Y +G V SI L+
Sbjct: 555 QHSSSVSFETSLVDLYAKCGDINQAEKVFGNKLYDELPLHNAMISAYALYGNVKESITLY 614
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
R+ + M+ + +T S+L AC+H G + + + IF M ++ +K EHY +VD+L
Sbjct: 615 RRLEDMAMKPDNITFTSLLYACTHAGDIVQAINIFTEMVSKHDMKPCLEHYGLMVDILAS 674
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
SG +A +L+ ++P M + CN + +L + + E +V +
Sbjct: 675 SGETNKALELIEEMPYKPDARMIQSLVASCNKQHKTELVDYLSRQLLESEPENSGNYVTI 734
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNE 541
SN A +G W+E +R++MK K ++K+PG S ++ + E V V N+
Sbjct: 735 SNAYAIEGSWNEVMKMREMMKAKGLKKKPGCSWIQIKGEGVHVFVAND 782
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 211/429 (49%), Gaps = 36/429 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL----NIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
+L C+ + L G+Q+HA + N N + +++KL+ YA C + A+ +F ++
Sbjct: 54 ILQGCVYERDLCTGQQIHARILKNGAFYARNEY-IETKLLIFYAKCDALEVAQDLFSRLR 112
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NVF ++ G + A+ F M E + + V KAC L G+
Sbjct: 113 VRNVFSWAAIIGLKCRIGLCEGALLGFVEMLENGVLPDNYVVPNVCKACGALHWSWFGRG 172
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + G + V V ++L DMY KCG+L AR VF + ER+VV+W +++ GY
Sbjct: 173 VHGYVLKAGLHDCVFVASSLADMYGKCGVLDDARMVFDEIPERNVVAWNALMVGYVQNGM 232
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFV--- 246
+EA+ L M+ EG+EP + T + +++ A G + A A + + + +
Sbjct: 233 NEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTS 292
Query: 247 -----------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
D+VTWN +ISG+ Q ++A+ + K M + ++ +
Sbjct: 293 ILNFYCKVGLIEYAEMIFDRIIGKDIVTWNLLISGYVQQGLVDDAMYMCKLMRLENLRYD 352
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+VT++ ++ A T ++ +G+E+ R ++ S+ +DMY+KCGS+ DA+ +FE
Sbjct: 353 SVTLSTLMSAAARTQNLNLGKEVQCYSIRHSFESEIVLASSTVDMYAKCGSIVDAKKVFE 412
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
T K++ WN ++ Y G+ +++LF ML E + N +T S++ + G V++
Sbjct: 413 STAEKDLILWNTLLAAYADSGLSGEALKLFYDMLLESVPPNIITWNSIILSFLRNGQVDE 472
Query: 404 GLEIFRSMK 412
E+F M+
Sbjct: 473 AKEMFLQMQ 481
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 233/532 (43%), Gaps = 85/532 (15%)
Query: 32 GKQVHALLCTNDLN--IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G+ VH + L+ +F + S L +Y CG ++ AR+VFD+IP NV N +++
Sbjct: 170 GRGVHGYVLKAGLHDCVF-VASSLADMYGKCGVLDDARMVFDEIPERNVVAWNALMVGYV 228
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
G +EAI S MR+ + T S L A + I++GKQ HA+A G E D
Sbjct: 229 QNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNI 288
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+G ++++ Y K GL+ A +F + +D+V+W +ISGY VD+A+ + + M+LE
Sbjct: 289 LGTSILNFYCKVGLIEYAEMIFDRIIGKDIVTWNLLISGYVQQGLVDDAMYMCKLMRLEN 348
Query: 210 LEPNQFTYNAIIASYARRGDSNAA---------FAFFSRM-------------------- 240
L + T + ++++ AR + N +F S +
Sbjct: 349 LRYDSVTLSTLMSAAARTQNLNLGKEVQCYSIRHSFESEIVLASSTVDMYAKCGSIVDAK 408
Query: 241 -----TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
TAE DL+ WN +++ +A S EALKLF ML+ + PN +T ++ +
Sbjct: 409 KVFESTAE---KDLILWNTLLAAYADSGLSGEALKLFYDMLLESVPPNIITWNSIILSFL 465
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
G + +E+ + G+ N+ SW
Sbjct: 466 RNGQVDEAKEMFLQMQSSGI-------------------------------FPNLISWTT 494
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
M+ + ++G + +I +M E G+R N T+ LSAC+H + G I + +
Sbjct: 495 MMNGWVQNGCSEEAIIFLRKMQESGLRPNAFTISVALSACTHLVSLNFGRSIHGYIIRNF 554
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAY-----DLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
S +VD+ + G + +A L ++P++ N+M A+ ++G
Sbjct: 555 QHSSSVSFETSLVDLYAKCGDINQAEKVFGNKLYDELPLH--NAMISAYA----LYGNVK 608
Query: 471 LAVTMGEEFFEMGLRKPDG--FVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
++T+ +M + KPD F L C G+ +A N+ M K+ K
Sbjct: 609 ESITLYRRLEDMAM-KPDNITFTSLLYACTHAGDIVQAINIFTEMVSKHDMK 659
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 195/415 (46%), Gaps = 48/415 (11%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI---VLKA 122
++L D+ NP+ + + G +EA+ L++E +R + I +L+
Sbjct: 1 SKLHHDRAGNPSSSSYFHQISSLCKHGEIREAL---RLVKEMDFRNVRIGPEIYGEILQG 57
Query: 123 CVGLLDIKKGKQVHAVATQMG--FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
CV D+ G+Q+HA + G + + + L+ Y+KC L A+ +F + R+V
Sbjct: 58 CVYERDLCTGQQIHARILKNGAFYARNEYIETKLLIFYAKCDALEVAQDLFSRLRVRNVF 117
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------NAIIASYARRGDSNAA 233
SW ++I C + + A++ F M G+ P+ + A+ S+ RG
Sbjct: 118 SWAAIIGLKCRIGLCEGALLGFVEMLENGVLPDNYVVPNVCKACGALHWSWFGRGVHGYV 177
Query: 234 F-------AFFSRMTAEGF---------------VPD--LVTWNAMISGFAQSKRENEAL 269
F + A+ + +P+ +V WNA++ G+ Q+ EA+
Sbjct: 178 LKAGLHDCVFVASSLADMYGKCGVLDDARMVFDEIPERNVVAWNALMVGYVQNGMNEEAI 237
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
+L M GI+P VTV+ L A G I+ G++ HA+ GL +D G+++++ Y
Sbjct: 238 RLLSDMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFY 297
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
K G ++ A +F+ K++ +WN +I Y + G+VD ++ + + M E +R + VTL
Sbjct: 298 CKVGLIEYAEMIFDRIIGKDIVTWNLLISGYVQQGLVDDAMYMCKLMRLENLRYDSVTLS 357
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH----YACVVDMLCRSGRMVEA 440
+++SA + + G E+ + Y ++ S E + VDM + G +V+A
Sbjct: 358 TLMSAAARTQNLNLGKEV-----QCYSIRHSFESEIVLASSTVDMYAKCGSIVDA 407
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 274/557 (49%), Gaps = 48/557 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI-PNPN 77
L +C SK L +QVHA + +I S + L+ + A L+F I P+PN
Sbjct: 24 LAKQCSSSKTL---QQVHAQMVVKS-SIHSPNNHLLSKAIHLKNFTYASLLFSHIAPHPN 79
Query: 78 VFMLNWMVMASAFT-GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ N M+ A T ++ A+ F M N FTF +C L + + H
Sbjct: 80 DYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAH 139
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ ++ +D ++LI MYS+CG + AR+VF + RD+VSW SMI+GY
Sbjct: 140 SLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAR 199
Query: 197 EAVVLFERM-KLEGLEP-----------------------------------NQFTYNAI 220
EAV +F M + +G EP N + +A+
Sbjct: 200 EAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSAL 259
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I+ YA+ GD +A F M A D++TWNA+ISG+AQ+ +EA+ LF M +
Sbjct: 260 ISMYAKCGDLGSARRIFDGMAAR----DVITWNAVISGYAQNGMADEAISLFHAMKEDCV 315
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
N +T+T VL A G++ +G++I + G D+F +ALIDMY+KCGSL A+
Sbjct: 316 TENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQR 375
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE--GMRANEVTLISVLSACSHG 398
+F+ KN ASWNAMI HG ++ LF+ M +E G R N++T + +LSAC H
Sbjct: 376 VFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHA 435
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLV +G +F M +G+ EHY+C+VD+L R+G + EA+DL+ ++P GA
Sbjct: 436 GLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGA 495
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C D+ + E+ +++ S I A W ++ +R +M++K +
Sbjct: 496 LLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGI 555
Query: 519 QKQPGFSRVEKRNEFVE 535
K PG S +E N E
Sbjct: 556 TKTPGCSWIEVENHLHE 572
>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
Length = 811
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 153/519 (29%), Positives = 268/519 (51%), Gaps = 6/519 (1%)
Query: 20 LGKCMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
+ C+ + A + +GKQ HA+ N L + + L + L+ Y G + A +VFD++
Sbjct: 257 VSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMF 316
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ +V N ++ G ++AI LMR + + T S ++ A ++K GK+
Sbjct: 317 DKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKE 376
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
V + + D+ + + +DMY+KCG + A++VF E+D++ W ++++ Y
Sbjct: 377 VQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAQSGL 436
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
EA+ LF M+LE + PN T+N II S R G+ N A F +M + G P+L++W
Sbjct: 437 SGEALRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSSGISPNLISWTT 496
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M++G Q+ EA+ + M SG++PN ++T L A S+ GR IH + R
Sbjct: 497 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSASANLASLHFGRSIHGYIIRNL 556
Query: 315 LH-IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
H V ++L+DMY+KCG + A +F + +NAMI Y +G V +I L+
Sbjct: 557 RHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAIALY 616
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
+ + G++ + VT S+LSAC+H G +++ + +F +M ++G+ EHY +VD+L
Sbjct: 617 RSLEDMGIKPDSVTFTSLLSACNHAGDIDQAVGVFTAMVLKHGMTPCLEHYGLMVDLLAS 676
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G +A L+ ++P M + CN + +L + E +V +
Sbjct: 677 AGETEKAIRLIEEMPYKPDARMIQSLVASCNKQHKTELVEYLSRHLLESEPENSGNYVTI 736
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
SN A +G W E +R++MK K ++K+PG S ++ + E
Sbjct: 737 SNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQIKGE 775
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 230/468 (49%), Gaps = 47/468 (10%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIPN 75
L C+ + L GKQ+HA + N + ++ +++KLV YA C + A ++F K+
Sbjct: 57 LQGCVYERDLSTGKQIHARILKNG-DFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRV 115
Query: 76 PNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NVF ++ G + A+ G+ ++ I+ N F V KAC L + G+
Sbjct: 116 RNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDN-FVVPNVCKACGALQWSRFGRG 174
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + G E+ V V ++L DMY KCG+L AR+VF + ER+VV+W +++ GY
Sbjct: 175 VHGYVIKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGM 234
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAF------------- 236
+EA+ LF M+ EG+EP + T + +++ A G + A A
Sbjct: 235 NEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTS 294
Query: 237 -----------------FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
F RM F D+VTWN +ISG+ Q +A+ + + M +
Sbjct: 295 LLNFYCKVGLIEYAEMVFDRM----FDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEK 350
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+K + VT++ ++ A T +++ G+E+ R L D+ S +DMY+KCGS+ DA+
Sbjct: 351 LKYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAK 410
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ T K++ WN ++ Y + G+ ++ LF M E + N +T ++ + G
Sbjct: 411 KVFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNG 470
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
V + E+F M+ G+ + + +++ + ++G EA LR++
Sbjct: 471 EVNEAKEMFLQMQSS-GISPNLISWTTMMNGMVQNGCSEEAILFLRKM 517
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 192/407 (47%), Gaps = 43/407 (10%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSI---VLKACVGLLDIKKGKQVHAVATQMG--FEN 146
G +EA+ SL+ E +R + I L+ CV D+ GKQ+HA + G +
Sbjct: 29 GEIKEAL---SLVTEMDFRNXRIGPEIYGEXLQGCVYERDLSTGKQIHARILKNGDFYAR 85
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
+ + L+ Y+KC L A +F + R+V SW ++I C + + A++ F M
Sbjct: 86 NEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEML 145
Query: 207 LEGLEPNQFTYNAIIAS-----YARRGDSNAAF---------AFFSRMTAEGF------- 245
+ P+ F + + ++R G + F + A+ +
Sbjct: 146 ENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLEDCVFVASSLADMYGKCGVLD 205
Query: 246 --------VPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
+P+ +V WNA++ G+ Q+ EA++LF M G++P VTV+ L A
Sbjct: 206 DARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASA 265
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
++ G++ HA+ GL +D G++L++ Y K G ++ A +F+ K+V +WN
Sbjct: 266 NMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMFDKDVVTWNL 325
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
+I Y + G+V+ +I + + M E ++ + VTL +++SA + ++ G E+ + R+
Sbjct: 326 LISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKEV-QCYCIRH 384
Query: 416 GVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
+ + +DM + G +V+A +D + + + N++ A+
Sbjct: 385 SLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAY 431
>gi|297796453|ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311946|gb|EFH42370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 273/528 (51%), Gaps = 6/528 (1%)
Query: 20 LGKCMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
+ C+ + A + +GKQ HA+ N L + + L + L+ Y G + A +VFD++
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMI 336
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ +V N ++ G + AI LMR + + T + ++ A ++K GK+
Sbjct: 337 DKDVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQNLKLGKE 396
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
V + FE+D+ + + ++DMY+KCG + A++VF E+D++ W ++++ Y
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTAEKDLILWNTLLAAYAESGL 456
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
E + LF M+LEG+ PN T+N II S R G+ + A F +M + G P+L++W
Sbjct: 457 SGEGLRLFYGMQLEGVPPNVITWNLIILSLLRNGEVDEAKDMFLQMQSSGIFPNLISWTT 516
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M++G Q+ EA+ + M SG++PN V++T L A S+ GR IH + R
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAVSITVALSACANLASLHFGRSIHGYIIRNL 576
Query: 315 LH-IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
H V ++L+DMY+KCG + A +F + +NAMI Y +G + +I L+
Sbjct: 577 QHSSSVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLYNAMISAYALYGNLKEAIALY 636
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
+ G++ + +T+ +VLSAC+H G + EI M ++G+ EHY +VD+L
Sbjct: 637 RSLEGVGLKPDNITITNVLSACNHAGDNNQATEIVTEMVSKHGMNPCLEHYGLMVDLLAS 696
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G+ +A L+ ++P M + CN + +L + + E +V +
Sbjct: 697 AGQTDKALRLIEEMPYKPDARMIQSLVASCNKQPKSELVDYLSRQLIESEPDNSGNYVTI 756
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNE 541
SN A +G W E +R+IMK K ++K+PG S ++ + E V V N+
Sbjct: 757 SNAYAVEGSWDEVVKMREIMKAKGLKKKPGCSWIQIKGEGVHVFVAND 804
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 232/465 (49%), Gaps = 39/465 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIP 74
+L C+ + L GKQ+HA + N + ++ +++KLV YA C ++ A ++F K+
Sbjct: 76 ILQGCVYERDLCTGKQIHARILKNG-DFYAKNEYIETKLVIFYAKCDALDIAEVLFTKLR 134
Query: 75 NPNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
NVF ++ G + A+ G+ ++ I+ N F V KAC L + G+
Sbjct: 135 VRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDN-FVVPNVCKACGALQWSRFGR 193
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH + G E+ V V ++L DMY KCG+L AR+VF + ER+VV+W +++ GY
Sbjct: 194 GVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNG 253
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFV-- 246
+EA+ LF M+ EG+EP + T + +++ A G + A A + + + +
Sbjct: 254 MNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLELDNILGT 313
Query: 247 ------------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
D+VTWN +ISG+ Q A+ + + M + +K
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKY 373
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ VT+ ++ A T ++++G+E+ R D+ S ++DMY+KCGS+ DA+ +F
Sbjct: 374 DCVTLATLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ T K++ WN ++ Y + G+ + LF M EG+ N +T ++ + G V+
Sbjct: 434 DSTAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEGVPPNVITWNLIILSLLRNGEVD 493
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
+ ++F M+ G+ + + +++ + ++G EA LR++
Sbjct: 494 EAKDMFLQMQSS-GIFPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 237/540 (43%), Gaps = 96/540 (17%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDV 63
IFP N + N + C + R G+ VH + L + + S L +Y CG +
Sbjct: 169 IFPDNFVVPN----VCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVL 224
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
+ AR VFD+IP NV N +++ G +EAI FS MR+ + T S L A
Sbjct: 225 DDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSAS 284
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+ +++GKQ HA+A G E D +G +L++ Y K GL+ A VF M ++DVV+W
Sbjct: 285 ANMGGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWN 344
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPN------------------------------ 213
+ISGY V+ A+ + + M+LE L+ +
Sbjct: 345 LIISGYVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQNLKLGKEVQCYCIRH 404
Query: 214 QFTYNAIIAS-----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
F + ++AS YA+ G A F TAE DL+ WN +++ +A+S E
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TAE---KDLILWNTLLAAYAESGLSGEG 460
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L+LF GM + G+ PN +T ++ + G + +++ + G+
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGEVDEAKDMFLQMQSSGI------------- 507
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
N+ SW M+ ++G + +I +M E G+R N V++
Sbjct: 508 ------------------FPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAVSI 549
Query: 389 ISVLSACSHGGLVEKGLE----IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---- 440
LSAC++ + G I R+++ V I +VDM + G + +A
Sbjct: 550 TVALSACANLASLHFGRSIHGYIIRNLQHSSSVSIETS----LVDMYAKCGDINKAEKVF 605
Query: 441 -YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
L ++P+Y N+M A+ ++G A+ + +GL KPD + ++N+ +A
Sbjct: 606 GSKLYSELPLY--NAMISAYA----LYGNLKEAIALYRSLEGVGL-KPDN-ITITNVLSA 657
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 201/429 (46%), Gaps = 45/429 (10%)
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
D+ NP+ V + G +EA+ + M R + +L+ CV D+
Sbjct: 28 DQALNPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLC 87
Query: 131 KGKQVHAVATQMG--FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
GKQ+HA + G + + + L+ Y+KC L A +F + R+V SW ++I
Sbjct: 88 TGKQIHARILKNGDFYAKNEYIETKLVIFYAKCDALDIAEVLFTKLRVRNVFSWAAIIGV 147
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-----YARRGDSNAAF--------- 234
C + + A++ F M + P+ F + + ++R G +
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDC 207
Query: 235 AFFSRMTAEGF---------------VPD--LVTWNAMISGFAQSKRENEALKLFKGMLV 277
F + A+ + +P+ +V WNA++ G+ Q+ EA++LF M
Sbjct: 208 VFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRK 267
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G++P VTV+ L A G ++ G++ HA+ GL +D G++L++ Y K G ++
Sbjct: 268 EGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEY 327
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A +F+ K+V +WN +I Y + G+V+++I + + M E ++ + VTL +++SA +
Sbjct: 328 AEMVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAAR 387
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEH----YACVVDMLCRSGRMVEA---YDLLRQVPMY 450
++ G E+ + Y ++ S E + V+DM + G +V+A +D + +
Sbjct: 388 TQNLKLGKEV-----QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTAEKDLI 442
Query: 451 VTNSMAGAF 459
+ N++ A+
Sbjct: 443 LWNTLLAAY 451
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 258/483 (53%), Gaps = 40/483 (8%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ L+ VYA GD+ AR V D++P N +V GN +EA+ +S M R
Sbjct: 316 TALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCR 375
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N FS VL AC L D++ G+++H +M N+V V +ALIDMY KC L A+ +
Sbjct: 376 PNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMI 435
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F+ + ++++V W S+ISGY N SK+ EA L
Sbjct: 436 FYSLPQKNIVCWNSLISGYSNNSKMVEAEEL----------------------------- 466
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
F +M A ++ +WN++ISG+AQ+++ +ALK F ML SG P +T + V
Sbjct: 467 ------FKKMPAR----NVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSV 516
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A S+++G+ +HA + ++G+ +F G+AL DMY+K G L ++ +F +N
Sbjct: 517 LLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRND 576
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+W AMI ++G + SI LFE M+ G+ NE T +++L ACSH GLVE + F
Sbjct: 577 VAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFE- 635
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M + G+ +HY C+VD+L R+G + EA DLL ++ + A + CNI+ ++
Sbjct: 636 MMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKE 695
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+ + E+ G+V+LSN+ A+ G+W +A +R +MK N++K G S V+ R
Sbjct: 696 MGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIR 755
Query: 531 NEF 533
++
Sbjct: 756 GQY 758
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 185/409 (45%), Gaps = 56/409 (13%)
Query: 19 LLGKCMKSKALRQGKQVH----ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
+LG C + LR G+++H + C+N N+F + S L+ +Y C + A+++F +P
Sbjct: 384 VLGACASLQDLRSGRKIHNQTLKMACSN--NVF-VSSALIDMYCKCKQLPDAQMIFYSLP 440
Query: 75 NPNVFMLNWMV------------------MASAFTGNFQEAIGYFSLMREFIYRCNKF-- 114
N+ N ++ M + ++ I ++ R+FI F
Sbjct: 441 QKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHA 500
Query: 115 -----------TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
TFS VL AC L ++ GK VHA ++G + + VG AL DMY+K G
Sbjct: 501 MLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGD 560
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
L S++RVF+ M +R+ V+WT+MI G +E+++LFE M G+ PN+ T+ AI+ +
Sbjct: 561 LDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFA 620
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ G A +F M A G P + M+ A++ EA L +L K
Sbjct: 621 CSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDL---LLKIESKSE 677
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI-DMYSKCGSLKDA---R 339
+ +L A + + ++G + L D G L+ +MY+ CG KDA R
Sbjct: 678 ANSWAALLSACNIYRNKEMGERAAKRL--QELDKDNTAGYVLLSNMYASCGKWKDAAEMR 735
Query: 340 TLFEITRIKNVA--SWNAMIGCY-------GKHGMVDSSIELFERMLEE 379
L + +K SW + G Y KH ++ E+ + + E
Sbjct: 736 ILMKGINLKKDGGCSWVQIRGQYQAFFSWETKHPLLPDVYEMLDLLTWE 784
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 191/459 (41%), Gaps = 103/459 (22%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA------------------------- 87
+V + GD+ SAR +FD +P +V MV A
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFF 213
Query: 88 SAFTGNF------QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
+A F ++A+G F M N+ T V+KAC+G + + +A +
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMK 273
Query: 142 MGF-ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ ++ V N+LI +Y + G +ARR+F M RDVVSWT+++ Y + ++ A
Sbjct: 274 SNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARR 333
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
+ + M E N+ ++ ++A + ++G++ A + +S+M A+
Sbjct: 334 VLDEMP----ERNEVSWGTLVARHEQKGNAKEAVSLYSQMLAD----------------- 372
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
G +PN + VL A ++ GR+IH +M +VF
Sbjct: 373 ------------------GCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVF 414
Query: 321 TGSALIDMYSKCGSLKDAR-------------------------------TLFEITRIKN 349
SALIDMY KC L DA+ LF+ +N
Sbjct: 415 VSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARN 474
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
VASWN++I Y ++ +++ F ML G E+T SVL AC+ +E G ++
Sbjct: 475 VASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMG-KMVH 533
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ + G+K S + DM +SG + + + ++P
Sbjct: 534 AKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMP 572
>gi|42562381|ref|NP_174190.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806502|sp|Q1PFQ9.2|PPR62_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g28690, mitochondrial; Flags: Precursor
gi|332192893|gb|AEE31014.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 520
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 280/536 (52%), Gaps = 58/536 (10%)
Query: 6 FPI-NNLS----VNYLDCLLGKCMKSKALRQGKQVHALLCTN----DLNIFSLKSKLVGV 56
FP+ N+S Y+ L + + S A + GK++HA + DLNI KL+ +
Sbjct: 22 FPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNI---SIKLLIL 78
Query: 57 YAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTF 116
+ CG ++ AR VFD++P P + N+M+ G +E + M + + +T
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 117 SIVLKAC-----VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
S+VLKA +L + VHA + E D + AL+D Y K G L SAR VF
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M + +VV TSMISGY N V++A +F K
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK------------------------- 233
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQS-KRENEALKLFKGMLVSGIKPNNVTVTGV 290
V D+V +NAM+ GF++S + ++ ++ M +G PN T V
Sbjct: 234 --------------VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
+ A + S ++G+++HA + + G++ + GS+L+DMY+KCG + DAR +F+ + KNV
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV 339
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SW +MI YGK+G + ++ELF RM E + N VT + LSACSH GLV+KG EIF S
Sbjct: 340 FSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFES 399
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M+ Y +K EHYAC+VD++ R+G + +A++ R +P + + A + CN+HG +
Sbjct: 400 MQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVE 459
Query: 471 LAVTMGEEFFEMGL-RKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
LA E F++ ++P ++ LSN+ A++ +W +R++MK + + K G S
Sbjct: 460 LASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 254/470 (54%), Gaps = 43/470 (9%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEA--IGYFSLMREFIYRCNKFTFSI 118
GD++ A L+F +P F+ W M AFT + A + + M + N +TFS
Sbjct: 61 GDISHAYLLFLSLPRRTSFI--WNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSF 118
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+L+AC L D+ G +HA A ++G+E V N L+ +Y+ C + SARR+F G RD
Sbjct: 119 LLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRD 178
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
VV+WT++I+G YA+ G A F
Sbjct: 179 VVTWTAVING-----------------------------------YAKSGQVVVARQLFD 203
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
M + + V+W+AMI+G+AQ EAL+LF M ++G +PN+ + G L A G
Sbjct: 204 EMPEK----NAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLG 259
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++ GR IHA V R + +D G+ALIDMY+KCG ++ A +F+ ++V ++ ++I
Sbjct: 260 ALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLIS 319
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
HG ++IE+F RM EG+ NEVT I +LSACS GLVE+GL IF+SM YG++
Sbjct: 320 GLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIE 379
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEE 478
+HY C+VD+L R+G + +A ++R++P+ + + GA N C +HG +L E
Sbjct: 380 PVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVEC 439
Query: 479 FFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
E L V+LSN+ A+ +W + +RK M+EK V+K PG S +E
Sbjct: 440 LAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIE 489
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 4/256 (1%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ ++ YA G V AR +FD++P N + M+ A G F+EA+ F+ M+ +R
Sbjct: 183 TAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFR 242
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N L AC L + +G+ +HA + D +G ALIDMY+KCG + +A RV
Sbjct: 243 PNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRV 302
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M +RDV ++TS+ISG N A+ +F RM+ EG+ PN+ T+ ++++ +R G
Sbjct: 303 FDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLV 362
Query: 231 NAAFAFFSRMT-AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
F MT G P + + ++ ++ +A ++ + M ++P++ +
Sbjct: 363 EEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREM---PLEPDSYVLGA 419
Query: 290 VLQAGGLTGSIQIGRE 305
+L A + G +++G+E
Sbjct: 420 LLNACRVHGDVELGKE 435
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 133/309 (43%), Gaps = 47/309 (15%)
Query: 204 RMKLEGLEPNQFTYNAIIA--SYARRGD-SNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
+ + G + F II+ + + +GD S+A F S F+ WN M+ F
Sbjct: 35 HLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFI-----WNTMLRAFT 89
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG------ 314
K L L+K ML +G PNN T + +LQA + G +HA R+G
Sbjct: 90 DKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDF 149
Query: 315 -----LHI--------------------DVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
LH+ DV T +A+I+ Y+K G + AR LF+ KN
Sbjct: 150 VQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKN 209
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
SW+AMI Y + G+ ++ELF M G R N ++ L+AC+ G +++G I
Sbjct: 210 AVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWI-H 268
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIH 466
+ +R + + + ++DM + G + A +D + ++ S+ N H
Sbjct: 269 AYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLAN----H 324
Query: 467 GRRDLAVTM 475
G A+ M
Sbjct: 325 GHSATAIEM 333
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C AL QG+ +HA + N + + L + L+ +YA CG V +A VFD++ + +V
Sbjct: 252 LTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDV 311
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
F ++ A G+ AI F+ M+ N+ TF +L AC + +++G ++
Sbjct: 312 FAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKS 371
Query: 139 ATQM-GFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
T + G E V L+D+ + G+L A+RV M
Sbjct: 372 MTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREM 408
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/515 (31%), Positives = 271/515 (52%), Gaps = 41/515 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
L+ +Y + R +FDK+ + N M+ + G ++E+I F M ++ +
Sbjct: 316 LLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPD 374
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
T + +L+AC L D++ GK VH G+E D + N LI+MY+KCG L +++ VF
Sbjct: 375 LLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFS 434
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------- 217
GM +D VSW SMI+ Y DEA+ LF+ MK + ++P+ TY
Sbjct: 435 GMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXL 493
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
N ++ YA+ G+ + F M A D++TWN +I+
Sbjct: 494 GKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR----DIITWNTIIA 549
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
S+ N L++ M G+ P+ T+ +L L + + G+EIH + ++GL
Sbjct: 550 SCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLES 609
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
DV G+ LI+MYSKCGSL+++ +F++ + K+V +W A+I G +G ++ F M
Sbjct: 610 DVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEME 669
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
G+ + V ++++ ACSH GLVE+GL F MK+ Y ++ EHYACVVD+L RS +
Sbjct: 670 AAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALL 729
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
+A D + +P+ +S+ GA + C + G ++A + E E+ +V++SN+
Sbjct: 730 DKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVY 789
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
AA G+W + ++RK +K + ++K PG S +E +N+
Sbjct: 790 AALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNK 824
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 229/442 (51%), Gaps = 40/442 (9%)
Query: 31 QGKQVHALLCTNDLN---IFSLKSKLVGVYAGCGDVNSARLVFD-KIPNPNVFMLNWMVM 86
Q ++H+L+ T L+ IFS +KL+ YA D S+ VF P+ NV+ N ++
Sbjct: 90 QLHKLHSLIITLGLHHSVIFS--AKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIR 147
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
A G F EA+ +S + + + +TF V+ AC GLLD + K +H MGF +
Sbjct: 148 ALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGS 207
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D+ +GNALIDMY + L AR+VF M RDVVSW S+ISGY +EA+ ++ R +
Sbjct: 208 DLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFR 267
Query: 207 LEGLEPNQFTYNAIIAS-----YARRGD-----------------SNAAFAFF------- 237
G+ P+ +T ++++ + GD +N + +
Sbjct: 268 NLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLI 327
Query: 238 --SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
R+ + + D V+WN MI G++Q E++KLF M V+ KP+ +T+T +LQA G
Sbjct: 328 DGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACG 386
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
G ++ G+ +H + G D + LI+MY+KCG+L ++ +F + K+ SWN+
Sbjct: 387 HLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNS 446
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
MI Y ++G D +++LF +M++ ++ + VT + +LS + G + G E+ + +
Sbjct: 447 MINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLA-KM 504
Query: 416 GVKISKEHYACVVDMLCRSGRM 437
G + +VDM + G M
Sbjct: 505 GFNSNIVVSNTLVDMYAKCGEM 526
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 285/542 (52%), Gaps = 50/542 (9%)
Query: 28 ALRQGKQVHALLCTNDL----NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+L GK+VH C + ++F + + LV +Y+ G ++ A VF +P +V N
Sbjct: 136 SLVDGKKVHC--CVFKMGFEDDVF-VAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNA 192
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
M+ GN A+G + M+ + + T + +L C D+ G +H + G
Sbjct: 193 MISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHG 252
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
++DV V NALI+MYSK G L A+ VF M RD+VSW S+I+ Y + A+ F+
Sbjct: 253 LDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFK 312
Query: 204 RMKLEGLEPNQFTY------------------------------------NAIIASYARR 227
M+L G+ P+ T NA++ YA+
Sbjct: 313 GMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKL 372
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM-LVSGIKPNNVT 286
G N A F ++ + D ++WN +++G+ Q+ +EA+ + M PN T
Sbjct: 373 GYMNCAHTVFDQLPRK----DTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGT 428
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EIT 345
++ A G++Q G +IHA + + L++DVF + LID+Y KCG L+DA +LF EI
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
R +V WNA+I G HG + +++LF+ ML E ++A+ +T +S+LSACSH GLV++G
Sbjct: 489 RDTSVP-WNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQ 547
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
+ F M++ YG+K S +HY C+VD+L R+G + +AY+L+R +P+ S+ GA + C I
Sbjct: 548 KCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKI 607
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
+G +L + E+ +V+LSNI A +W +R + +++ ++K PG+S
Sbjct: 608 YGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWS 667
Query: 526 RV 527
V
Sbjct: 668 SV 669
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 161/545 (29%), Positives = 266/545 (48%), Gaps = 57/545 (10%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
+ L C+ A K++HALL NI L +KL+ +Y GD++ +R FD I
Sbjct: 25 FNALFNSCVNVNA---TKKLHALLLVFGKSQNIV-LSTKLINLYVTHGDISLSRSTFDYI 80
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIG----YFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
N+F N ++ A G + EA+ FS+ R + +TF +LKACV L+D
Sbjct: 81 HKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD- 139
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
GK+VH +MGFE+DV V +L+ +YS+ G+L A +VF M +DV SW +MISG+
Sbjct: 140 --GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGF 197
Query: 190 CNVSKVDEAVVLFERMKLE-----------------------------------GLEPNQ 214
C A+ + RMK E GL+ +
Sbjct: 198 CQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDV 257
Query: 215 FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
F NA+I Y++ G A F +M V DLV+WN++I+ + Q+ + AL+ FKG
Sbjct: 258 FVSNALINMYSKFGRLQDAQMVFDQME----VRDLVSWNSIIAAYEQNNDPSTALRFFKG 313
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM-GLHIDVFTGSALIDMYSKCG 333
M + GI+P+ +TV + +I R I V R L DV G+AL++MY+K G
Sbjct: 314 MQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLG 373
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVL 392
+ A T+F+ K+ SWN ++ Y ++G+ +I+ + M E N+ T +S++
Sbjct: 374 YMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSII 433
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
A SH G +++G++I + + + + C++D+ + GR+ +A L ++P T
Sbjct: 434 PAYSHVGALQQGMKIHAKLIKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPR-DT 491
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENLRK 511
+ A IHGR + A+ + ++ ++ FV L + C+ G E +
Sbjct: 492 SVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFD 551
Query: 512 IMKEK 516
IM+++
Sbjct: 552 IMQKE 556
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 174/565 (30%), Positives = 287/565 (50%), Gaps = 47/565 (8%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCT----NDLNIFSLKSKLVGVYA 58
R+++ V C+L C R G++VHA + +++++ + LV +YA
Sbjct: 187 RMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLN---ALVTMYA 243
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI 118
CGD+ +AR VFD + + N M+ + + F M E + N T +
Sbjct: 244 KCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITS 303
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
V A L ++ K++H A + GF DV+ N+LI MY+ G + A ++F M +D
Sbjct: 304 VTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKD 363
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------- 217
+SWT+MISGY D+A+ ++ M+L + P+ T
Sbjct: 364 AMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHE 423
Query: 218 --------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
NA++ YA+ + A F M + D+V+W++MI+GF +
Sbjct: 424 LAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEK----DVVSWSSMIAGFCFNH 479
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
R EAL F+ ML +KPN+VT L A TG+++ G+EIHA V R G+ + + +
Sbjct: 480 RSFEALYYFRYML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPN 538
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
AL+D+Y KCG A F + K+V SWN M+ + HG+ D ++ LF +M+E G
Sbjct: 539 ALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHP 598
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
+EVT +++L ACS G+V +G E+F M E++ + + +HYAC+VD+L R G++ EAY+L
Sbjct: 599 DEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNL 658
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ ++P+ ++ GA NGC IH +L + E+ V+L ++ G+W
Sbjct: 659 INRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKW 718
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVE 528
+ +RK M+EK +++ G S VE
Sbjct: 719 AQVARVRKTMREKGLEQDNGCSWVE 743
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/496 (28%), Positives = 232/496 (46%), Gaps = 51/496 (10%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
G++ A VF K+P +VF N MV G +EA+ + M R + +TF VL
Sbjct: 145 GEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVL 204
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
+ C G+ D + G++VHA + GF ++V V NAL+ MY+KCG + +AR+VF GM D +
Sbjct: 205 RTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCI 264
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------- 217
SW +MI+G+ + + + LF M ++PN T
Sbjct: 265 SWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFA 324
Query: 218 ------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
N++I Y G A FSRM + D ++W AMISG+ ++
Sbjct: 325 VKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK----DAMSWTAMISGYEKNGFP 380
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
++AL+++ M + + P++VT+ L A G + +G ++H L G V +AL
Sbjct: 381 DKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANAL 440
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
++MY+K + A +F+ K+V SW++MI + + ++ F ML ++ N
Sbjct: 441 LEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNS 499
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY---D 442
VT I+ LSAC+ G + G EI + R G+ ++D+ + G+ A+
Sbjct: 500 VTFIAALSACAATGALRSGKEI-HAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFS 558
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAAD 500
+ + + N M F HG D+A+++ + EMG PD FV L C+
Sbjct: 559 VHSEKDVVSWNIMLSGFV----AHGLGDIALSLFNQMVEMG-EHPDEVTFVALLCACSRA 613
Query: 501 GEWHEAENLRKIMKEK 516
G + L +M EK
Sbjct: 614 GMVIQGWELFHMMTEK 629
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 285/557 (51%), Gaps = 56/557 (10%)
Query: 32 GKQVHALLC-----TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
G HA C + N+F + + L+ +Y G ++ AR VFD++P+ N ++W M
Sbjct: 139 GAVAHAFACKLPSSSGSNNVF-VSTALLNMYCKLGAISDARRVFDQMPHRNA--VSWAAM 195
Query: 87 ASAF-TGNFQEAIGYFSLMREFIYRC----NKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
S + TG E F L R + C N+F + VL A L + G Q+H + +
Sbjct: 196 VSGYATGKCSEEA--FELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLK 253
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
G VSV N+L+ MY+K + +A VF ER+ ++W++MI+GY + D A +
Sbjct: 254 DGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATM 313
Query: 202 FERMKLEGLEPNQFTY-----------------------------------NAIIASYAR 226
F +M G P +FT+ +A++ YA+
Sbjct: 314 FLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAK 373
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G + A F ++ V D+V W AMI+G Q+ EAL L+ M G+ P+ +T
Sbjct: 374 CGCTGDAKDGFHQLYD---VDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLT 430
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
VT VL+A +++ G+++HA + + G + G+AL MYSKCG+L+D+ +F
Sbjct: 431 VTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMP 490
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+++ SWN++I + +HG +++LFE M EG+ + +T I+VL ACSH GLV++G
Sbjct: 491 DRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWF 550
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
FR+M + YG+ +HYAC+VD+L R+G++ EA D + + + + C
Sbjct: 551 YFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSL 610
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
D+ GE+ E+G +++LSNI AA +W++ E +R +M+ + V K PG S
Sbjct: 611 RDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSW 670
Query: 527 VEKRNE---FVEKEVQN 540
VE N+ FV E Q+
Sbjct: 671 VELNNQVNVFVVGEQQH 687
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 132/253 (52%), Gaps = 3/253 (1%)
Query: 28 ALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPN-PNVFMLNWMV 85
AL GKQ H L+ +KS LV +YA CG A+ F ++ + +V + M+
Sbjct: 341 ALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMI 400
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
G +EA+ +S M + + T + VL+AC L ++ GKQ+HA + GF
Sbjct: 401 TGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFG 460
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
SVG AL MYSKCG L + VF M +RD++SW S+ISG+ + +A+ LFE M
Sbjct: 461 LGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEM 520
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKR 264
KLEG+ P+ T+ ++ + + G + + +F M+ + G +P L + ++ +++ +
Sbjct: 521 KLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQ 580
Query: 265 ENEALKLFKGMLV 277
EA + + +
Sbjct: 581 LKEAKDFIESITI 593
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 19 LLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C AL GKQ+HA L C L S+ + L +Y+ CG++ + +VF ++P+
Sbjct: 434 VLRACACLAALEPGKQLHAQILKCGFGLG-GSVGTALSTMYSKCGNLEDSMVVFRRMPDR 492
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQ 134
++ N ++ + G ++A+ F M+ + TF VL AC +GL+D +
Sbjct: 493 DIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVD-RGWFY 551
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
A++ G + ++D+ S+ G L A+
Sbjct: 552 FRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAK 585
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 279/545 (51%), Gaps = 49/545 (8%)
Query: 30 RQGKQVHALLCTNDLNI--FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
R+G+QVH LN ++ + L+ +YA CGD++ AR VF + + + N M+
Sbjct: 119 RKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITG 178
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
F++A+ ++ MR+ + F L +C L I G+Q H ++G + D
Sbjct: 179 LDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMD 238
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV-SKVDEAVVLFERMK 206
VSV N L+ +Y++ L ++VF M ERD VSW ++I + + V EA+ +F M
Sbjct: 239 VSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMM 298
Query: 207 LEGLEPNQFTY-----------------------------------NAIIASYARRGDSN 231
G PN+ T+ NA++A Y + G+
Sbjct: 299 RAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEME 358
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
FSRM+ D V+WN+MISG+ ++ +A+ L M+ G + + T VL
Sbjct: 359 NCEEIFSRMSER---RDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVL 415
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A +++ G E+HA R L DV GSAL+DMYSKCG + A F + ++N+
Sbjct: 416 SACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLY 475
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SWN+MI Y +HG D+++ LF RM G + +T + VLSACSH GLV++G E F+SM
Sbjct: 476 SWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSM 535
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP----MYVTNSMAGAFRNGCNIHG 467
E YG+ EHY+C+VD+L R+G + + + + ++P + + ++ GA C +G
Sbjct: 536 TEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGAC---CRGNG 592
Query: 468 RR-DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
R+ +L E F M + +V+LSN+ A+ G+W + R+ M+E V+K+ G S
Sbjct: 593 RKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSW 652
Query: 527 VEKRN 531
V ++
Sbjct: 653 VTMKD 657
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 149/520 (28%), Positives = 250/520 (48%), Gaps = 61/520 (11%)
Query: 43 DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGY 100
D ++F L + L+ VY GD SAR +FD++P+ N + W + S +T N ++A G
Sbjct: 32 DSDLF-LCNTLINVYVRIGDCVSARKLFDEMPDRN--GVTWACLISGYTQNGMPEDACG- 87
Query: 101 FSLMREFIYR---CNKFTFSIVLKACV-GLLDIKKGKQVHAVATQMGFEN-DVSVGNALI 155
+++E I+ N+F F ++AC +L +KG+QVH A + G + V+VGN LI
Sbjct: 88 --VLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLI 145
Query: 156 DMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF 215
+MY+KCG + AR VF M ++D VSW SMI+G ++AV + M+ GL P+ F
Sbjct: 146 NMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNF 205
Query: 216 TYNAIIASYARRG----------------------DSNAAFAFFSRMT---------AEG 244
+ ++S A G SN A ++ + +
Sbjct: 206 ALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWM 265
Query: 245 FVPDLVTWNAMISGFAQSKRE-NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
D V+WN +I A S +EA+++F M+ +G PN VT +L + ++
Sbjct: 266 LERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLS 325
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGK 362
+IHAL+ + + D +AL+ Y K G +++ +F ++ ++ SWN+MI Y
Sbjct: 326 HQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIH 385
Query: 363 HGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
+ ++ +++L M++ G R + T +VLSAC+ +E G+E+ + R ++
Sbjct: 386 NELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEV-HACAIRACLESDVV 444
Query: 423 HYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEF 479
+ +VDM + GR+ A +P +Y NSM + HG D A+ + F
Sbjct: 445 IGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYAR----HGHGDNALRL---F 497
Query: 480 FEMGL--RKPD--GFVMLSNICAADGEWHEAENLRKIMKE 515
M L + PD FV + + C+ G E K M E
Sbjct: 498 TRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTE 537
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 143/299 (47%), Gaps = 42/299 (14%)
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + GF++D+ + N LI++Y + G SAR++F M +R+ V+W +ISGY
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 196 DEAVVLFERMKLEGLEPNQFTY-------------------------------------N 218
++A + + M EG PN+F + N
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+I YA+ GD + A + F M + D V+WN+MI+G Q+K +A+K + M +
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDK----DSVSWNSMITGLDQNKCFEDAVKSYNSMRKT 198
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G+ P+N + L + G I +G++ H ++GL +DV + L+ +Y++ L +
Sbjct: 199 GLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAEC 258
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGM-VDSSIELFERMLEEGMRANEVTLISVLSACS 396
+ +F ++ SWN +IG G V +IE+F M+ G N VT I++L+ S
Sbjct: 259 QKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVS 317
>gi|347954462|gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihimalaya wallichii]
Length = 830
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/519 (30%), Positives = 263/519 (50%), Gaps = 6/519 (1%)
Query: 20 LGKCMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
+ C+ + A + +GKQ HA+ N L + + L + L+ Y G + A ++FD++
Sbjct: 277 VSTCLSASANMGGVAEGKQSHAIAILNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMF 336
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ +V N ++ G ++AI LMR + + T S ++ A ++K GK+
Sbjct: 337 DKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLENLKYDCVTLSTLMSAAARTKNLKFGKE 396
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
V + E+D+ + + +DMY+KCG + A++VF E+D++ W ++++ Y
Sbjct: 397 VQCYCIRHSLESDIVLASITMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGL 456
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
EA+ LF M+LE + PN T+N II S R G+ N A F +M + G P+L++W
Sbjct: 457 SGEALRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSSGISPNLISWTT 516
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M++G Q+ EA+ + M SG++PN ++T L A S+ GR IH + R
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQDSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRNL 576
Query: 315 LH-IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
H V ++L+DMY+KCG + A +F + +NAMI Y +G V +I L+
Sbjct: 577 QHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAITLY 636
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
+ + G + + +T S+LSAC+H G + + +EIF M ++GVK EHY +VD+L
Sbjct: 637 RSLEDMGNKPDNITFTSLLSACNHVGDINQAIEIFTDMVSKHGVKPCLEHYGLMVDLLAS 696
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G A L+ ++P M + CN + +L E +V +
Sbjct: 697 AGETDRALKLIEEMPYKPDARMIQSLVASCNKQHKSELVEYFSRHLLESEPENSGNYVTI 756
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
SN A +G W E +R +MK K + K PG S ++ + E
Sbjct: 757 SNAYAVEGSWDEVVKMRDMMKAKGLTKNPGCSWIQIKGE 795
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 232/465 (49%), Gaps = 39/465 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIP 74
+L C+ + L GKQ+HA + N + ++ +++KLV YA C + A+++F K+
Sbjct: 76 ILQGCVYERDLCTGKQIHARILKNG-DFYAGNEYIETKLVIFYAKCDALEIAQVLFSKLR 134
Query: 75 NPNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
NVF ++ G + A+ G+ ++ I+ N F V KAC L + G+
Sbjct: 135 VRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDN-FVVPNVCKACGALQWSRFGR 193
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH + G E+ V V ++L DMY KCG+L AR+VF + ER+VV+W +++ GY
Sbjct: 194 GVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALLVGYVQNG 253
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR-----RGDSNAAFAFFSRMTAEG---- 244
+EA+ L M+ +G+EP++ T + +++ A G + A A + + +
Sbjct: 254 MNEEAIRLLSDMRKDGVEPSRVTVSTCLSASANMGGVAEGKQSHAIAILNGLELDNILGT 313
Query: 245 ----------------------FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
F D+VTWN +ISG+ Q +A+ + + M + +K
Sbjct: 314 SLLNFYCKVGLIEYAEMIFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLENLKY 373
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ VT++ ++ A T +++ G+E+ R L D+ S +DMY+KCGS+ DA+ +F
Sbjct: 374 DCVTLSTLMSAAARTKNLKFGKEVQCYCIRHSLESDIVLASITMDMYAKCGSIVDAKKVF 433
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ T K++ WN ++ Y + G+ ++ LF M E + N +T ++ + G V
Sbjct: 434 DSTVEKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGEVN 493
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
+ E+F M+ G+ + + +++ + ++G EA LR++
Sbjct: 494 EAKEMFLQMQSS-GISPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 199/432 (46%), Gaps = 51/432 (11%)
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
D+ NP+ V + G +EA+ + M R + +L+ CV D+
Sbjct: 28 DQALNPSSTSYFHRVSSLCKNGEIKEALSLVTKMDFRNLRIGPEIYGEILQGCVYERDLC 87
Query: 131 KGKQVHAVATQMGFENDVSVGNALID-----MYSKCGLLCSARRVFHGMFERDVVSWTSM 185
GKQ+HA + G D GN I+ Y+KC L A+ +F + R+V SW ++
Sbjct: 88 TGKQIHARILKNG---DFYAGNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAI 144
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-----YARRGDSNAAF------ 234
I C + + A++ F M + P+ F + + ++R G +
Sbjct: 145 IGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGL 204
Query: 235 ---AFFSRMTAEGF---------------VPD--LVTWNAMISGFAQSKRENEALKLFKG 274
F + A+ + +P+ +V WNA++ G+ Q+ EA++L
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALLVGYVQNGMNEEAIRLLSD 264
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M G++P+ VTV+ L A G + G++ HA+ GL +D G++L++ Y K G
Sbjct: 265 MRKDGVEPSRVTVSTCLSASANMGGVAEGKQSHAIAILNGLELDNILGTSLLNFYCKVGL 324
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
++ A +F+ K+V +WN +I Y + G+V+ +I + + M E ++ + VTL +++SA
Sbjct: 325 IEYAEMIFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLENLKYDCVTLSTLMSA 384
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEH----YACVVDMLCRSGRMVEA---YDLLRQV 447
+ ++ G E+ + Y ++ S E + +DM + G +V+A +D +
Sbjct: 385 AARTKNLKFGKEV-----QCYCIRHSLESDIVLASITMDMYAKCGSIVDAKKVFDSTVEK 439
Query: 448 PMYVTNSMAGAF 459
+ + N++ A+
Sbjct: 440 DLILWNTLLAAY 451
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 174/565 (30%), Positives = 287/565 (50%), Gaps = 47/565 (8%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCT----NDLNIFSLKSKLVGVYA 58
R+++ V C+L C R G++VHA + +++++ + LV +YA
Sbjct: 187 RMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLN---ALVTMYA 243
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI 118
CGD+ +AR VFD + + N M+ + + F M E + N T +
Sbjct: 244 KCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITS 303
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
V A L ++ K++H A + GF DV+ N+LI MY+ G + A ++F M +D
Sbjct: 304 VTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKD 363
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------- 217
+SWT+MISGY D+A+ ++ M+L + P+ T
Sbjct: 364 AMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHE 423
Query: 218 --------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
NA++ YA+ + A F M + D+V+W++MI+GF +
Sbjct: 424 LAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEK----DVVSWSSMIAGFCFNH 479
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
R EAL F+ ML +KPN+VT L A TG+++ G+EIHA V R G+ + + +
Sbjct: 480 RSFEALYYFRYML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPN 538
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
AL+D+Y KCG A F + K+V SWN M+ + HG+ D ++ LF +M+E G
Sbjct: 539 ALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHP 598
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
+EVT +++L ACS G+V +G E+F M E++ + + +HYAC+VD+L R G++ EAY+L
Sbjct: 599 DEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNL 658
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ ++P+ ++ GA NGC IH +L + E+ V+L ++ G+W
Sbjct: 659 INRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKW 718
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVE 528
+ +RK M+EK +++ G S VE
Sbjct: 719 AQVARVRKTMREKGLEQDNGCSWVE 743
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 227/477 (47%), Gaps = 51/477 (10%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
G++ A VF K+P +VF N MV G +EA+ + M R + +TF VL
Sbjct: 145 GEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVL 204
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
+ C G+ D + G++VHA + GF ++V V NAL+ MY+KCG + +AR+VF GM D +
Sbjct: 205 RTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCI 264
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------- 217
SW +MI+G+ + + + LF M ++PN T
Sbjct: 265 SWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFA 324
Query: 218 ------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
N++I Y G A FSRM + D ++W AMISG+ ++
Sbjct: 325 VKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK----DAMSWTAMISGYEKNGFP 380
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
++AL+++ M + + P++VT+ L A G + +G ++H L G V +AL
Sbjct: 381 DKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANAL 440
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
++MY+K + A +F+ K+V SW++MI + + ++ F ML ++ N
Sbjct: 441 LEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNS 499
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRMVEAYDL 443
VT I+ LSAC+ G + G EI + R G I E Y ++D+ + G+ A+
Sbjct: 500 VTFIAALSACAATGALRSGKEI-HAYVLRCG--IGSEGYVPNALLDLYVKCGQTSYAW-- 554
Query: 444 LRQVPMYVTNSMAG--AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
Q ++ + +G HG D+A+++ + EMG PD ++ +CA
Sbjct: 555 -AQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMG-EHPDEVTFVALLCA 609
>gi|116830928|gb|ABK28420.1| unknown [Arabidopsis thaliana]
Length = 521
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 280/536 (52%), Gaps = 58/536 (10%)
Query: 6 FPI-NNLS----VNYLDCLLGKCMKSKALRQGKQVHALLCTN----DLNIFSLKSKLVGV 56
FP+ N+S Y+ L + + S A + GK++HA + DLNI KL+ +
Sbjct: 22 FPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNI---SIKLLIL 78
Query: 57 YAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTF 116
+ CG ++ AR VFD++P P + N+M+ G +E + M + + +T
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 117 SIVLKAC-----VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
S+VLKA +L + VHA + E D + AL+D Y K G L SAR VF
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M + +VV TSMISGY N V++A +F K
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK------------------------- 233
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQS-KRENEALKLFKGMLVSGIKPNNVTVTGV 290
V D+V +NAM+ GF++S + ++ ++ M +G PN T V
Sbjct: 234 --------------VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
+ A + S ++G+++HA + + G++ + GS+L+DMY+KCG + DAR +F+ + KNV
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV 339
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SW +MI YGK+G + ++ELF RM E + N VT + LSACSH GLV+KG EIF S
Sbjct: 340 FSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFES 399
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M+ Y +K EHYAC+VD++ R+G + +A++ R +P + + A + CN+HG +
Sbjct: 400 MQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVE 459
Query: 471 LAVTMGEEFFEMGL-RKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
LA E F++ ++P ++ LSN+ A++ +W +R++MK + + K G S
Sbjct: 460 LASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 280/528 (53%), Gaps = 49/528 (9%)
Query: 46 IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMR 105
I S+++ L+ +Y D+ AR +FD++ +V + W VM + + +G + R
Sbjct: 183 ISSVQNSLLSMYVD-ADMECARELFDEMHEKDV--IAWSVMIGGYLQWEEPQVG-LQMFR 238
Query: 106 EFIY----RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC 161
+ + + VLKAC D+ G+ VH + GF+ D+ V N+LIDMYSKC
Sbjct: 239 KMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKC 298
Query: 162 GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE------------- 208
SA +VF+ + +R+ VSW SM+SG+ EA L M+ E
Sbjct: 299 KDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNIL 358
Query: 209 ----------------------GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
G E N+ +A+I +YA+ A+ F+RM
Sbjct: 359 QICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRR--- 415
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
D+V+W+ MISGFA + +EA+ +++ M +KPN +T+ +L+A +T ++ +
Sbjct: 416 -DVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWA 474
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H + R G +V G+A++DMYSKCG + +R F+ +KN+ +W+AMI YG +G+
Sbjct: 475 HGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLA 534
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
++ LF M G++ N VT +SVL+ACSHGGLVE+GL +F+SM + G++ EHY+C
Sbjct: 535 HEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSC 594
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTN--SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
+VDML R+G++ A ++++ +P + N S+ G+ + C +G +L E+
Sbjct: 595 MVDMLGRAGKLDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEP 654
Query: 485 RKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
G+++ S++ AADG W +A +R + KEK V+ G+S V N+
Sbjct: 655 SNSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNK 702
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 145/545 (26%), Positives = 249/545 (45%), Gaps = 69/545 (12%)
Query: 30 RQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNP-NVFMLNWMVMA 87
R GK +HA L + F S+ + ++G Y CGD + A VF+ + + N ++
Sbjct: 64 RHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHG 123
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
G + +F+ R + N T +V++AC L G +H + GF
Sbjct: 124 HLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAI 183
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
SV N+L+ MY + C AR +F M E+DV++W+ MI GY + + +F +M L
Sbjct: 184 SSVQNSLLSMYVDADMEC-ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVL 242
Query: 208 -EGLEPNQ-----------------------------------FTYNAIIASYARRGDSN 231
G+EP+ F N++I Y++ D+
Sbjct: 243 VPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAG 302
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
+AF F+ ++ + V+WN+M+SGF ++ +EA L M ++ + VT+ +L
Sbjct: 303 SAFKVFNEISQR----NNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNIL 358
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
Q + IH ++ R G + SALID Y+KC ++ A +F R ++V
Sbjct: 359 QICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVV 418
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SW+ MI + G D +I +++ M + ++ N +T+I++L ACS E+ RS
Sbjct: 419 SWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTA------ELKRS- 471
Query: 412 KERYGVKISKEHYA-------CVVDMLCRSGRMV---EAYDLLRQVPMYVTNSMAGAFRN 461
K +GV I ++ +A VVDM + G ++ A+D L + ++M A+
Sbjct: 472 KWAHGVAI-RQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAY-- 528
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRKIMKEKNVQ 519
++G A+ + E GL KP+ LS + C+ G E +L K M ++ +
Sbjct: 529 --GMNGLAHEALALFAEMKRHGL-KPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQE-LG 584
Query: 520 KQPGF 524
+PGF
Sbjct: 585 LEPGF 589
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 205/442 (46%), Gaps = 48/442 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C S+ + G+ VH L+ D ++F +++ L+ +Y+ C D SA VF++I
Sbjct: 256 VLKACASSRDVCTGRLVHGLVIHRGFDCDLF-VENSLIDMYSKCKDAGSAFKVFNEISQR 314
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N N M+ N+ EA S MR+ ++ T +L+ C + K +H
Sbjct: 315 NNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIH 374
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
V + G E + V +ALID Y+KC L+ A VF M RDVVSW++MISG+ + K D
Sbjct: 375 CVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPD 434
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
EA+ +++ M + ++PN T A++
Sbjct: 435 EAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVV 494
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y++ G+ A+ F ++ + ++VTW+AMI+ + + +EAL LF M G+K
Sbjct: 495 DMYSKCGEILASRRAFDQLA----LKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLK 550
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
PN VT VL A G ++ G + ++V +GL S ++DM + G L A
Sbjct: 551 PNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIE 610
Query: 341 LFEI--TRIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+ + +KN AS W +++ +G+ + E R+LE +N + S +
Sbjct: 611 VIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELE-PSNSAGYLVASSMYAA 669
Query: 398 GGLVEKGLEIFRSMKERYGVKI 419
GL + I R + + GVK+
Sbjct: 670 DGLWDDAARI-RVLAKEKGVKV 690
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 159/351 (45%), Gaps = 36/351 (10%)
Query: 82 NWM--VMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
NW+ + S+ G +QE + Y + + I + F +LKA L + GK +HA
Sbjct: 14 NWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAW-SFLSHRHGKSLHAC 72
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF-ERDVVSWTSMISGYCNVSKVDE 197
+ GF++ S+GN+++ Y +CG A VF+ M RD VSW +I G+ + +
Sbjct: 73 LIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVA 132
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP---------- 247
+ F ++ G EPN T +I + G + + GF
Sbjct: 133 GLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLS 192
Query: 248 --------------------DLVTWNAMISGFAQSKRENEALKLFKGM-LVSGIKPNNVT 286
D++ W+ MI G+ Q + L++F+ M LV GI+P+ V
Sbjct: 193 MYVDADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVV 252
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ VL+A + + GR +H LV G D+F ++LIDMYSKC A +F
Sbjct: 253 MVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEIS 312
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+N SWN+M+ + + + L M +E + +EVTL+++L C +
Sbjct: 313 QRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKY 363
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 113/271 (41%), Gaps = 31/271 (11%)
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV-TGVLQAGG 295
FS + + +P+ W I + + + E + + + +GI+ +V+V +L+A
Sbjct: 3 FSAIVSGSKLPN---WILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWS 59
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFT--GSALIDMYSKCGSLKDARTLF-EITRIKNVAS 352
S + G+ +HA + + G D FT G++++ Y +CG A +F + R ++ S
Sbjct: 60 FL-SHRHGKSLHACLIKQGF--DSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVS 116
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC-----SHGGLVEKGLEI 407
WN +I + +G + + + F G N T++ V+ AC H GL+ G I
Sbjct: 117 WNILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLI 176
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF----RNGC 463
V+ S DM C E +D + + + + M G +
Sbjct: 177 KSGFWAISSVQNSLLSMYVDADMECAR----ELFDEMHEKDVIAWSVMIGGYLQWEEPQV 232
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
+ R + + G E PDG VM+S
Sbjct: 233 GLQMFRKMVLVPGIE--------PDGVVMVS 255
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 172/541 (31%), Positives = 278/541 (51%), Gaps = 58/541 (10%)
Query: 43 DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEA----- 97
D ++ S L G Y G++++AR +F+++P +V N M+ A G +EA
Sbjct: 119 DRDLISWNVMLSG-YVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFD 177
Query: 98 -------IGYFSLMREFIYRC----------NKFTFSIVLKACV--GLLDIKKGKQVHAV 138
I + L+ ++ +K + IV C+ G + K+ ++
Sbjct: 178 QMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSL 237
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+M + +S N +I Y++ GLL ARR+F + RDV +WT+M+SG+ +DEA
Sbjct: 238 FDRMPVRDKIS-WNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEA 296
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE----------GFVP- 247
+FE M E N+ ++NA+IA Y + A F +M + G+
Sbjct: 297 TRIFEEMP----EKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQC 352
Query: 248 ----------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
D ++W AMISG+AQS + EAL LF M G N + L
Sbjct: 353 GNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACAL 412
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
+ ++++G+++H + + G G+AL+ MY KCGS+++A +FE K++
Sbjct: 413 SSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIV 472
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SWN MI Y +HG ++ LFE M + ++ ++VTL+ VLSACSH G V+KG+E F SM
Sbjct: 473 SWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSM 531
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
+ YG+ + +HY C++D+L R+GR+ EA +L++ +P Y + GA IHG +L
Sbjct: 532 YQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTEL 591
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
E+ FEM +V+LSN+ AA G W E +R M++K V+K PG+S VE +N
Sbjct: 592 GEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQN 651
Query: 532 E 532
+
Sbjct: 652 K 652
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 166/331 (50%), Gaps = 48/331 (14%)
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
++D+ N I Y + G SA VF+GM R V++ +MISGY + +K D A +FE+
Sbjct: 57 DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M L ++N +++ Y + G+ +AA A F++M + D+V+WNAM+SGFAQ+
Sbjct: 117 MPDRDL----ISWNVMLSGYVKNGNLSAARALFNQMPEK----DVVSWNAMLSGFAQNGF 168
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR---------EIHALVCRMGL 315
EA K+F MLV N ++ G+L A G I+ R EI + C MG
Sbjct: 169 VEEARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGG 224
Query: 316 HI------------------DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
++ D + + +I Y++ G L +AR LFE I++V +W AM+
Sbjct: 225 YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMV 284
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
+ ++GM+D + +FE M E+ NEV+ ++++ +EK E+F M R
Sbjct: 285 SGFVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMPSR--- 337
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ + +V + G + +A L ++P
Sbjct: 338 --NTSSWNTMVTGYAQCGNIDQAKILFDEMP 366
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 183/373 (49%), Gaps = 35/373 (9%)
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
I + ++ N + A G + A+ F+ MR R + T++ ++ G L K
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMIS---GYLSNNKF 107
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
V +M + D+ N ++ Y K G L +AR +F+ M E+DVVSW +M+SG+
Sbjct: 108 DCARKVFEKMP-DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQN 166
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD-SNAAFAFFSRMTAEGFVPDLVT 251
V+EA +F++M L N+ ++N ++++Y + G +A F S+M E +V+
Sbjct: 167 GFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWE-----IVS 217
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
WN ++ G+ + KR ++A LF M V N+ +TG Q G L+ + ++ E+
Sbjct: 218 WNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR-- 275
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
DVF +A++ + + G L +A +FE KN SWNAMI Y + ++ + E
Sbjct: 276 ------DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARE 329
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LF++M N + ++++ + G +++ +F M +R + +A ++
Sbjct: 330 LFDQMPSR----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCIS-----WAAMISGY 380
Query: 432 CRSGRMVEAYDLL 444
+SG+ EA L
Sbjct: 381 AQSGQSEEALHLF 393
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 4/179 (2%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLV 69
L+ + L C L C + AL GKQ+H L + + L+ +Y CG + A V
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDV 462
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
F+ I ++ N M+ A G +EA+ F M+ I + + T VL AC +
Sbjct: 463 FEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMTI-KPDDVTLVGVLSACSHTGFV 521
Query: 130 KKGKQV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMI 186
KG + +++ G + +ID+ + G L A + M F D +W +++
Sbjct: 522 DKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 256/496 (51%), Gaps = 40/496 (8%)
Query: 33 KQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT 91
KQ+HA L + + SL S++ V A + A+L+F + V N + + A
Sbjct: 32 KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEG 91
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
+ +AI F +REF + +T S VLKAC LLD++ GK VH ++G ++++ +
Sbjct: 92 DSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQ 151
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N ++ +Y+ CG + AR+VF M +RDV++W
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITW----------------------------- 182
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
N +IA + GD+ A+ F+ M ++ +W +MI G+AQ + EA+ L
Sbjct: 183 ------NIMIARLVKMGDAEGAYKLFAEMPER----NVRSWTSMIGGYAQCGKSKEAIDL 232
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F M +G+ PN VTV VL A G++ +GR IH R G ++ + LIDMY K
Sbjct: 233 FLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVK 292
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
CG L+DA +F+ + V SW+AMI HG + ++ LF +M+ G++ N VT I +
Sbjct: 293 CGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGI 352
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
L ACSH G+VEKG + F SM YG+ EHY C+VD+ R+G + EA++ + +P+
Sbjct: 353 LHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAP 412
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRK 511
+ GA GC +H LA ++ +V+LSNI A G W + +RK
Sbjct: 413 NGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRK 472
Query: 512 IMKEKNVQKQPGFSRV 527
+M+++ V+K PG+S +
Sbjct: 473 LMRDRGVKKTPGWSSI 488
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/494 (31%), Positives = 270/494 (54%), Gaps = 33/494 (6%)
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR-CNKFTFSIVLK 121
V+ + +F+++ NP+ F+ N ++ + F + F M++ Y +K+T+ +++K
Sbjct: 54 VSYSTSIFNRLLNPSTFLYNILLKIFSKNSQFIDTFSLFYRMKQSEYALSDKYTYPLLIK 113
Query: 122 ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS 181
C L +K+G+ VH A + G +DV VG++LI Y KC + SAR+VF + ER+VVS
Sbjct: 114 VCSNELRLKEGEIVHGSAIRCGVSDDVYVGSSLISFYGKCKEILSARKVFDEIPERNVVS 173
Query: 182 WTSMISGYCNVSKVDEAVVLFERMK----------LEGL-----------------EPNQ 214
WT+M++GY +V ++ A +FERM + GL E N
Sbjct: 174 WTAMVAGYASVGDLENAKRVFERMPERNLPSWNAMISGLGKAGDLSGARKVFDEMVERNV 233
Query: 215 FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
++ +I YA+ GD +A A F E D+V W+A+ISG++++++ NEA+K+F
Sbjct: 234 VSFTVMIDGYAKVGDMASARALFD----EAPEKDVVAWSALISGYSRNEQPNEAVKIFFE 289
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI-DVFTGSALIDMYSKCG 333
M+ +KP+ + ++ A G+ + + + + + + + +ALIDM++KCG
Sbjct: 290 MVSMNVKPDEFIMVSLMSACSQLGNSDLAKWVDSYLSQTSIDTRQAHVLAALIDMHAKCG 349
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
+++ A LF+ +++ ++I HG ++ELF RML+EG+ + V +L+
Sbjct: 350 NMEKAVKLFQDMPSRDLIPCCSLIQGLSIHGRGVEAVELFNRMLDEGLIPDTVAFTVILT 409
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
ACS GGL+E G F +MK +Y V S HYAC+VD+L R+G++ AYDLL+ +P+
Sbjct: 410 ACSRGGLIEDGWHFFDTMKNKYSVVPSPNHYACMVDLLSRAGQLRAAYDLLKSMPLKPHA 469
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIM 513
GA C +HG +L + E+ K +V+LSNI A+ +W + +R M
Sbjct: 470 CAWGALLGACKLHGDVELREEVANRLLELEPEKAGSYVLLSNIYASANQWLDVSIVRDEM 529
Query: 514 KEKNVQKQPGFSRV 527
KE+ ++K PG S +
Sbjct: 530 KERGIRKIPGCSYI 543
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 201/447 (44%), Gaps = 59/447 (13%)
Query: 11 LSVNYLDCLLGK-CMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSAR 67
LS Y LL K C L++G+ VH A+ C +++ + S L+ Y C ++ SAR
Sbjct: 102 LSDKYTYPLLIKVCSNELRLKEGEIVHGSAIRCGVSDDVY-VGSSLISFYGKCKEILSAR 160
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
VFD+IP NV MV A G+ + A F M E N +++ ++
Sbjct: 161 KVFDEIPERNVVSWTAMVAGYASVGDLENAKRVFERMPER----NLPSWNAMISGLGKAG 216
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D+ ++V +M N VS +ID Y+K G + SAR +F E+DVV+W+++IS
Sbjct: 217 DLSGARKVF---DEMVERNVVSF-TVMIDGYAKVGDMASARALFDEAPEKDVVAWSALIS 272
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQF-------------------------------- 215
GY + +EAV +F M ++P++F
Sbjct: 273 GYSRNEQPNEAVKIFFEMVSMNVKPDEFIMVSLMSACSQLGNSDLAKWVDSYLSQTSIDT 332
Query: 216 ----TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
A+I +A+ G+ A F M + DL+ ++I G + R EA++L
Sbjct: 333 RQAHVLAALIDMHAKCGNMEKAVKLFQDMPSR----DLIPCCSLIQGLSIHGRGVEAVEL 388
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE-IHALVCRMGLHIDVFTGSALIDMYS 330
F ML G+ P+ V T +L A G I+ G + + + + ++D+ S
Sbjct: 389 FNRMLDEGLIPDTVAFTVILTACSRGGLIEDGWHFFDTMKNKYSVVPSPNHYACMVDLLS 448
Query: 331 KCGSLKDARTLFEITRIKNVA-SWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTL 388
+ G L+ A L + +K A +W A++G HG V+ E+ R+LE E +A L
Sbjct: 449 RAGQLRAAYDLLKSMPLKPHACAWGALLGACKLHGDVELREEVANRLLELEPEKAGSYVL 508
Query: 389 ISVLSACSHGGLVEKGLEIFRS-MKER 414
+S + A ++ L + I R MKER
Sbjct: 509 LSNIYASANQWL---DVSIVRDEMKER 532
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 263/504 (52%), Gaps = 43/504 (8%)
Query: 28 ALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+L G+ +H ++ ++F + + L+ Y+ GD++SA LVF KI ++ N M+
Sbjct: 146 SLLAGQAIHGMVMKASFGSDLF-ISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMI 204
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
G+ +EA+ F M+ R N+ T VL AC +D++ G+ + G +
Sbjct: 205 SGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGID 264
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
++ + NA++DMY KCG L ARR+F M E+D+VSWT+MI G
Sbjct: 265 INLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDG----------------- 307
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
YA+ GD +AA F M E D+ WNA+IS + Q+ +
Sbjct: 308 ------------------YAKVGDYDAARRVFDVMPRE----DITAWNALISSYQQNGKP 345
Query: 266 NEALKLFKGM-LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
EAL +F+ + L KPN VT+ L A G++ +G IH + + G+ ++ ++
Sbjct: 346 KEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTS 405
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
LIDMYSKCG L+ A +F ++V W+AMI HG ++I+LF +M E ++ N
Sbjct: 406 LIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPN 465
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
VT ++L ACSH GLV++G F M+ YGV +HYAC+VD+L R+G + EA +L+
Sbjct: 466 AVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELI 525
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
++P+ + S+ GA C I+G +LA E +V+LSNI A G+W
Sbjct: 526 EKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWD 585
Query: 505 EAENLRKIMKEKNVQKQPGFSRVE 528
LR+ MK ++K+PG S +E
Sbjct: 586 CVSRLRQHMKVSGLEKEPGCSSIE 609
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 254/470 (54%), Gaps = 43/470 (9%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEA--IGYFSLMREFIYRCNKFTFSI 118
GD++ A L+F +P F+ W M AFT + A + + M + N +TFS
Sbjct: 36 GDISHAYLLFLSLPRRTSFI--WNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSF 93
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+L+AC L D+ G +HA A ++G+E V N L+ +Y+ C + SARR+F G RD
Sbjct: 94 LLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRD 153
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
VV+WT++I+G YA+ G A F
Sbjct: 154 VVTWTAVING-----------------------------------YAKSGQVVVARQLFD 178
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
M + + V+W+AMI+G+AQ EAL+LF M ++G +PN+ + G L A G
Sbjct: 179 EMPEK----NAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLG 234
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++ GR IHA V R + +D G+ALIDMY+KCG ++ A +F+ ++V ++ ++I
Sbjct: 235 ALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLIS 294
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
HG ++IE+F RM EG+ NEVT I +LSACS GLVE+GL IF+SM YG++
Sbjct: 295 GLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIE 354
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEE 478
+HY C+VD+L R+G + +A ++R++P+ + + GA N C +HG +L E
Sbjct: 355 PVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVEC 414
Query: 479 FFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
E L V+LSN+ A+ +W + +RK M+EK V+K PG S +E
Sbjct: 415 LAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIE 464
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 4/256 (1%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ ++ YA G V AR +FD++P N + M+ A G F+EA+ F+ M+ +R
Sbjct: 158 TAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFR 217
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N L AC L + +G+ +HA + D +G ALIDMY+KCG + +A RV
Sbjct: 218 PNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRV 277
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M +RDV ++TS+ISG N A+ +F RM+ EG+ PN+ T+ ++++ +R G
Sbjct: 278 FDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLV 337
Query: 231 NAAFAFFSRMT-AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
F MT G P + + ++ ++ +A ++ + M ++P++ +
Sbjct: 338 EEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREM---PLEPDSYVLGA 394
Query: 290 VLQAGGLTGSIQIGRE 305
+L A + G +++G+E
Sbjct: 395 LLNACRVHGDVELGKE 410
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 133/309 (43%), Gaps = 47/309 (15%)
Query: 204 RMKLEGLEPNQFTYNAIIA--SYARRGD-SNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
+ + G + F II+ + + +GD S+A F S F+ WN M+ F
Sbjct: 10 HLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFI-----WNTMLRAFT 64
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG------ 314
K L L+K ML +G PNN T + +LQA + G +HA R+G
Sbjct: 65 DKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDF 124
Query: 315 -----LHI--------------------DVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
LH+ DV T +A+I+ Y+K G + AR LF+ KN
Sbjct: 125 VQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKN 184
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
SW+AMI Y + G+ ++ELF M G R N ++ L+AC+ G +++G I
Sbjct: 185 AVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWI-H 243
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIH 466
+ +R + + + ++DM + G + A +D + ++ S+ N H
Sbjct: 244 AYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLAN----H 299
Query: 467 GRRDLAVTM 475
G A+ M
Sbjct: 300 GHSATAIEM 308
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C AL QG+ +HA + N + + L + L+ +YA CG V +A VFD++ + +V
Sbjct: 227 LTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDV 286
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
F ++ A G+ AI F+ M+ N+ TF +L AC + +++G ++
Sbjct: 287 FAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKS 346
Query: 139 ATQM-GFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
T + G E V L+D+ + G+L A+RV M
Sbjct: 347 MTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREM 383
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 264/514 (51%), Gaps = 39/514 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
LV +YA GD+ +AR VFD+I NV M+ G +E + F+ MRE +
Sbjct: 163 LVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPS 222
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
++T + VL AC L + +G+ VH + G + + A++DMY KCG + ARR+F
Sbjct: 223 EYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFD 282
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT---------------- 216
+ D+V WT+MI GY +A++LF K + PN T
Sbjct: 283 ELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSL 342
Query: 217 -------------------YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
NA++ YA+ + A F R++ + D+VTWN++I+
Sbjct: 343 GRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNK----DVVTWNSLIA 398
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
G+ ++ NEAL LF M V G P+ +++ L A G + IG+ H +
Sbjct: 399 GYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLS 458
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
+V+ +AL+++Y+KC L A+ +F +N +W AMIG YG G SI+L +ML
Sbjct: 459 NVYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKML 518
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
++ ++ NEV S+LS CSH G+V G F SM + + + S +HYAC+VD+L R+G +
Sbjct: 519 KDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNL 578
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
EA + ++++PM S+ GAF +GC +H R + + KPD +V++SN+
Sbjct: 579 EEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVLMSNLY 638
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+ G W ++ +R++M+E+ + K PG S V N
Sbjct: 639 TSYGRWDKSLAIRRLMQERGLVKLPGCSSVGLEN 672
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/418 (31%), Positives = 204/418 (48%), Gaps = 52/418 (12%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C +LR +HA LL L ++KL+ YA GD+ SAR V D+ P P+
Sbjct: 29 LLPACATLPSLRA---LHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPD 85
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNK-----FTFSIVLKACVGLLDIKKG 132
+ + A G +A+ MR RC + S+ LKA V D + G
Sbjct: 86 PYTYRVALGWHAAAGRHADALALHRGMRR---RCPEAHDDVVLLSLALKASVRSADFRYG 142
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+++H A + G D V N L+DMY+K G L +AR+VF + R+VVSWTSM+SG
Sbjct: 143 RRLHCNAVKAG-GADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQN 201
Query: 193 SKVDEAVVLFERMKLEGLEPNQFT------------------------------YNAIIA 222
+E + LF M+ E + P+++T +N I
Sbjct: 202 GFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFIT 261
Query: 223 S-----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
+ Y + G+ A F + GFV DLV W MI G+ Q+ +AL LF
Sbjct: 262 AAVLDMYVKCGEVEDARRLFDEL---GFV-DLVLWTTMIVGYTQNGSPLDALLLFSDKKF 317
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
I PN+VT+ VL A ++ +GR IHA+ ++ + + +AL+DMY+KC +L +
Sbjct: 318 VHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSE 377
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
A +F K+V +WN++I Y ++ M + ++ LF +M +G + +++++ LSAC
Sbjct: 378 ANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSAC 435
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 269/516 (52%), Gaps = 50/516 (9%)
Query: 28 ALRQGKQVHALLCTNDLN----IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
L KQ+HA + N+L+ + + + + L+F ++ +PN F+ +
Sbjct: 23 TLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLYSA 82
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
++ A A G F +I ++ M FTFS + L + G Q+H A G
Sbjct: 83 LIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSL---LKNPSLGSQLHLHAFLFG 139
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
F ND+ VGN +I MY K G+L AR+VF M RDVV+WT +I
Sbjct: 140 FVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELI----------------- 182
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
+YAR GD ++A F + V D+V W +M++G++Q+
Sbjct: 183 ------------------VAYARSGDMDSACELFVGLP----VKDMVAWTSMVTGYSQNA 220
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAG---GLTGSIQIGREIHALVCRMGLHIDVF 320
+AL+ F+ M +G+ + +T+ G + A G++G REI A R G +VF
Sbjct: 221 MPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREI-AESSRFGSGSNVF 279
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
GSALIDMYSKCG++++A +F+ + NV S+++MI + HG S+I+LF MLE G
Sbjct: 280 VGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENG 339
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++ N VT + + +ACSH G+VE+G ++F +MKE YGV + +HYAC+ D+L R+G + +A
Sbjct: 340 IKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKA 399
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
L++ +PM + GA +IHG D+A FE+ +++LS A
Sbjct: 400 LQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALA 459
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEK 536
+W + +RK+M+EK ++K PG S VE +N + +
Sbjct: 460 AKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHE 495
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/515 (31%), Positives = 273/515 (53%), Gaps = 41/515 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C + +L GKQ+HA + + I + S L+ +YA CG A+ VF+ + + N
Sbjct: 277 LTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNS 336
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
++ S F +++ F+ MR + ++F + ++ C +D+ G+Q+H++
Sbjct: 337 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 396
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ G + V N+LI +Y+KCG L +A VF M ERD+VSWTSMI+ Y + + +A
Sbjct: 397 CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKA 456
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
F +G++ T NAI TWNAM+
Sbjct: 457 REFF-----DGMD----TRNAI------------------------------TWNAMLGA 477
Query: 259 FAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
+ Q E + LK++ ML + P+ VT + + G+ ++G +I + GL +
Sbjct: 478 YIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLIL 537
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
+V +A I MYSKCG + +A+ LF++ K+V SWNAMI Y +HGM + + F+ ML
Sbjct: 538 NVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML 597
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
+G + + ++ ++VLS CSH GLV++G F M +G+ EH++C+VD+L R+G +
Sbjct: 598 SKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHL 657
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
EA DL+ ++PM T + GA + C IHG +LA + FE+ +++L+ I
Sbjct: 658 TEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIY 717
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ G+ ++ +RK+M++K ++K PG+S +E N+
Sbjct: 718 SDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENK 752
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 177/410 (43%), Gaps = 73/410 (17%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSAR-LVFDKIPNPN 77
L C AL + +H L T L + L++ L+ Y CG ++ AR L+ I PN
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70
Query: 78 VFMLNWMVMASAFTGNFQEA-------------------IGYF-------------SLMR 105
V N M+ A G+ +A GYF S+ R
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
N FTF V+K+C L + Q+ + + F D V AL+DM+ +CG +
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
A R+F ER P F N+++A YA
Sbjct: 191 FASRLF-SQIER----------------------------------PTIFCRNSMLAGYA 215
Query: 226 RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ + A +F M D+V+WN MI+ +QS R EAL L M G++ ++
Sbjct: 216 KLYGIDHAIEYFEDMAER----DVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 271
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T T L A S+ G+++HA V R ID + SALI++Y+KCGS K+A+ +F
Sbjct: 272 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 331
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ +N SW +IG ++ S+ELF +M E M ++ L +++S C
Sbjct: 332 QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI- 344
+ L++ G G++ R +H + +GL VF + L+ Y CG+L DAR L
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+ NV + N M+ Y K G + + ELF+RM R + + +++S G
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRM----PRRDVASWNTLMSGYFQARRFLDG 121
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLC 432
LE F SM R G + C V C
Sbjct: 122 LETFVSM-HRSGDSLPNAFTFCCVMKSC 148
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 176/571 (30%), Positives = 282/571 (49%), Gaps = 79/571 (13%)
Query: 5 IFPINNLSVNYLDC-----LLGKCMKSKALRQGKQVHALLC----TNDLNIFSLKSKLVG 55
+F NL DC LL C AL GKQ H+ T+D+ + + L+
Sbjct: 339 LFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVV---EGSLLD 395
Query: 56 VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFT 115
+Y C D+ +A F + N ++ F+ M+ N+FT
Sbjct: 396 LYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEGIVPNQFT 440
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+ +LK C L G+Q+H + GF+ +V V + LIDMY+K G L A ++F +
Sbjct: 441 YPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLK 500
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------ 217
E DVVSWT+MI+GY K EA+ LF+ M+ +G++ + +
Sbjct: 501 ENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQ 560
Query: 218 -----------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
NA+++ YAR G A+A F ++ A+ D V+WN+++SGFA
Sbjct: 561 IHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAK----DNVSWNSLVSGFA 616
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
QS EAL +F M +G++ N+ T + A +++IG++IH ++ + G +
Sbjct: 617 QSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETE 676
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
+ALI +Y+KCG++ D SWN+MI Y +HG +++LFE M +
Sbjct: 677 VSNALITLYAKCGTIDDI-------------SWNSMITGYSQHGCGFEALKLFEDMKQLD 723
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ N VT + VLSACSH GLV++G+ FRSM E + + EHYACVVD+L RSG + A
Sbjct: 724 VLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRA 783
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
+ ++P+ + + CN+H D+ E+ + +V++SN+ A
Sbjct: 784 KRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVS 843
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
G+W + R++MK++ V+K+PG S VE N
Sbjct: 844 GKWDCRDRTRQMMKDRGVKKEPGRSWVEVDN 874
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 217/440 (49%), Gaps = 38/440 (8%)
Query: 28 ALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
+ R +Q+HA T+ + + + L+ +Y G ++SA+ VF+ + + ++W+ M
Sbjct: 179 SFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARD--SVSWVAM 236
Query: 87 ASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
S + N +EA+ F IVL AC + + GKQ+H + + GF
Sbjct: 237 ISGLSQNGYEEEAMLLFC--------------QIVLSACTKVEFFEFGKQLHGLVLKQGF 282
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
++ V NAL+ +YS+ G L SA ++FH M +RD VS+ S+ISG ++ A+ LF++
Sbjct: 283 SSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKK 342
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS------- 257
M L+ +P+ T +++++ A G F S G D+V +++
Sbjct: 343 MNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSD 402
Query: 258 ---------GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
+ Q N++ ++F M + GI PN T +L+ G+ +G +IH
Sbjct: 403 IKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHT 462
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
V + G +V+ S LIDMY+K G L A +F + +V SW AMI Y +H
Sbjct: 463 QVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTE 522
Query: 369 SIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACV 427
++ LF+ M ++G++++ + S +SAC+ +++G +I +S Y +S + +
Sbjct: 523 ALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGN--AL 580
Query: 428 VDMLCRSGRMVEAYDLLRQV 447
V + R G++ EAY Q+
Sbjct: 581 VSLYARCGKVREAYAAFDQI 600
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 228/500 (45%), Gaps = 46/500 (9%)
Query: 24 MKSKALRQGKQVHALLCTNDLNIFSLKS--KLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
M+ +R Q L LN S KL+ Y GD+N A VFD++P ++
Sbjct: 72 MEQHGVRANSQTFLWLLEGCLNSRSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCW 131
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG-LLDIKKGKQVHAVAT 140
N + G F M ++ F++VL+ C G + + +Q+HA
Sbjct: 132 NRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTI 191
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
GFE+ + N LID+Y K G L SA++VF + RD VSW +MISG +EA++
Sbjct: 192 TSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAML 251
Query: 201 LFERMKL---------------------EGLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
LF ++ L +G + NA++ Y+R G+ ++A F
Sbjct: 252 LFCQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHC 311
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
M+ D V++N++ISG AQ N AL LFK M + KP+ VTV +L A G+
Sbjct: 312 MSQR----DRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGA 367
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
+ G++ H+ + G+ D+ +L+D+Y KC +K A F C
Sbjct: 368 LPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFL---------------C 412
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
YG+ ++ S ++F +M EG+ N+ T S+L C+ G + G +I + + G +
Sbjct: 413 YGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQI-HTQVLKTGFQF 471
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEF 479
+ + ++DM + G++ A + R++ S A G H + A+ + +E
Sbjct: 472 NVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWT-AMIAGYTQHDKFTEALNLFKEM 530
Query: 480 FEMGLRKPD-GFVMLSNICA 498
+ G++ + GF + CA
Sbjct: 531 QDQGIKSDNIGFASAISACA 550
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 208/455 (45%), Gaps = 56/455 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C K + GKQ+H L+ + + + + LV +Y+ G+++SA +F + +
Sbjct: 257 VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRD 316
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
N ++ A G A+ F M + + T + +L AC + + GKQ H+
Sbjct: 317 RVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHS 376
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
A + G +D+ V +L+D+Y KC + +A F Y + +++
Sbjct: 377 YAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNK 421
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIAS---------------------------------- 223
+ +F +M++EG+ PNQFTY +I+ +
Sbjct: 422 SFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLID 481
Query: 224 -YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA+ G + A F R+ D+V+W AMI+G+ Q + EAL LFK M GIK
Sbjct: 482 MYAKHGKLDHALKIFRRLKEN----DVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKS 537
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+N+ + A ++ GR+IHA C G D+ G+AL+ +Y++CG +++A F
Sbjct: 538 DNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAF 597
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ K+ SWN+++ + + G + ++ +F +M + G+ N T S +SA ++ V
Sbjct: 598 DQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVR 657
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
G +I M + G E ++ + + G +
Sbjct: 658 IGKQI-HGMIRKTGYDSETEVSNALITLYAKCGTI 691
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 138/343 (40%), Gaps = 73/343 (21%)
Query: 98 IGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDM 157
IGY LM + R N TF +L+ C+ G + LID
Sbjct: 66 IGYLHLMEQHGVRANSQTFLWLLEGCLNSRSFYDGLK-------------------LIDF 106
Query: 158 YSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE--------- 208
Y G L A VF M R + W + + + + LF RM +
Sbjct: 107 YLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIF 166
Query: 209 ---------------------------GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT 241
G E + F N +I Y + G ++A F +
Sbjct: 167 AVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLK 226
Query: 242 AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
A D V+W AMISG +Q+ E EA+ LF + VL A +
Sbjct: 227 AR----DSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFE 268
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
G+++H LV + G + + +AL+ +YS+ G+L A +F ++ S+N++I
Sbjct: 269 FGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLA 328
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+ G ++ ++ LF++M + + + VT+ S+LSAC+ G + G
Sbjct: 329 QQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNG 371
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 288/554 (51%), Gaps = 54/554 (9%)
Query: 23 CMKSKALRQGKQVHALLC----TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
C + +L+ GKQ+H L DL I + L+ +Y+ G + S+ +F+ +PN +
Sbjct: 265 CAELGSLKLGKQIHQLAIKFEFVEDLYILN---ALLNMYSNNGSLESSHQLFESVPNRDA 321
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD-IKKGKQVHA 137
+ N M+ A A G +EA+ F M+ + ++ T I+L C L + KGK +HA
Sbjct: 322 PLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHA 381
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ G D S+GNAL+ MY++ + S +++F M D++SW +MI + +
Sbjct: 382 HVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQ 441
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIAS---------------------------------- 223
A LFERM+ ++PN +T +I+A+
Sbjct: 442 ACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALAD 501
Query: 224 -YARRGDSNAAFAFFSRMTAEGFVPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
Y GD A F EG PD L++WNAMI+ + ++ + ++AL LF M +S
Sbjct: 502 MYMNCGDEATARDLF-----EG-CPDRDLISWNAMIASYVKNNQAHKALLLFHRM-ISEA 554
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG--LHIDVFTGSALIDMYSKCGSLKDA 338
+PN+VT+ VL + ++ G+ +HA V R G L +D+ +A I MY++CGSL+ A
Sbjct: 555 EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSA 614
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+F+ +N+ SWNAMI YG +G ++ F +MLE+G R N VT +SVLSACSH
Sbjct: 615 ENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHS 674
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
G +E GL++F SM + + V HY+C+VD+L R G + EA + + +P+ S+ A
Sbjct: 675 GFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRA 734
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
+ C + A T+ E+ ++ +V+LSN+ A G W E +R +KEK +
Sbjct: 735 LLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGL 794
Query: 519 QKQPGFSRVEKRNE 532
+K PG S + +N+
Sbjct: 795 RKPPGISWIIVKNQ 808
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 187/383 (48%), Gaps = 45/383 (11%)
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+I +P + N ++ A N Q + ++ M N T +VLKAC +++
Sbjct: 14 QIKDPKHW--NSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GK +H +DV VG A++D Y KCG + AR VF M +RDVV W +M+ GY
Sbjct: 72 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAII-----ASYARRG-------------DSN-- 231
+EA++L M E L PN T A++ AS R G DSN
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 191
Query: 232 ---AAFAFFSRMTAEGF--------VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
A F+ R V ++V+WNAMISG+ +AL+LF MLV +
Sbjct: 192 VATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEV 251
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
K + VT+ +QA GS+++G++IH L + D++ +AL++MYS GSL+ +
Sbjct: 252 KFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQ 311
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS---- 396
LFE ++ WN+MI Y G + +++LF RM EG++ +E T++ +LS C
Sbjct: 312 LFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELAS 371
Query: 397 --------HGGLVEKGLEIFRSM 411
H +++ G+ I S+
Sbjct: 372 GLLKGKSLHAHVIKSGMRIDASL 394
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 216/476 (45%), Gaps = 54/476 (11%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C A+ +GK +H + DL + + + +V Y CG V AR VFD +
Sbjct: 56 LPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMS 115
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ +V + N MV G ++EA+ M R N T +L AC G +++ G+
Sbjct: 116 DRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRG 175
Query: 135 VHAVATQMG-FENDVSVGNALIDMYSKCGLLCSARRVFHGMFE----RDVVSWTSMISGY 189
VH + G F+++ V ALI Y + + RV +F+ R++VSW +MISGY
Sbjct: 176 VHGYCLRNGMFDSNPHVATALIGFYLRFDM-----RVLPLLFDLMVVRNIVSWNAMISGY 230
Query: 190 CNVSKVDEAVVLFERM------------------------------------KLEGLEPN 213
+V +A+ LF +M K E +E +
Sbjct: 231 YDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVE-D 289
Query: 214 QFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
+ NA++ Y+ G ++ F + D WN+MIS +A EA+ LF
Sbjct: 290 LYILNALLNMYSNNGSLESSHQLFESVPNR----DAPLWNSMISAYAAFGCHEEAMDLFI 345
Query: 274 GMLVSGIKPNNVTVTGVLQ-AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
M G+K + TV +L L + G+ +HA V + G+ ID G+AL+ MY++
Sbjct: 346 RMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTEL 405
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
++ + +F+ + ++ SWN MI ++ + + ELFERM E ++ N T+IS+L
Sbjct: 406 NCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISIL 465
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+AC ++ G I + ++ ++I++ + DM G A DL P
Sbjct: 466 AACEDVTCLDFGRSIHGYVM-KHSIEINQPLRTALADMYMNCGDEATARDLFEGCP 520
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 164/363 (45%), Gaps = 63/363 (17%)
Query: 177 RDVVSWTSMISGYCNVSKVDEAVV-LFERMKLEGLEPNQFTYNAIIASYA-----RRGDS 230
+D W S+I N+ K D+A++ + +M+ G+ PN T ++ + A RG S
Sbjct: 16 KDPKHWNSVIKHQANL-KNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKS 74
Query: 231 -----------------NAAFAFFSRMTAEGFVP------------DLVTWNAMISGFAQ 261
A F+ + GFV D+V WNAM+ G+
Sbjct: 75 IHRSIQGTDLMDDVRVGTAVVDFYCKC---GFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL-HIDVF 320
EA+ L + M ++PN+ T+ +L A +++GR +H R G+ +
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 191
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
+ALI Y + ++ LF++ ++N+ SWNAMI Y G ++ELF +ML +
Sbjct: 192 VATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 250
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEI------FRSMKERYGVKISKEHYACVVDMLCRS 434
++ + VT++ + AC+ G ++ G +I F +++ Y + +++M +
Sbjct: 251 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILN-------ALLNMYSNN 303
Query: 435 GRMVEAYDLLRQVP---MYVTNSMAGAFRN-GCNIHGRRDLAVTMGEEFFEMGLRKPDGF 490
G + ++ L VP + NSM A+ GC+ DL + M E G++K +
Sbjct: 304 GSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEA-MDLFIRMQSE----GVKKDERT 358
Query: 491 VML 493
V++
Sbjct: 359 VVI 361
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 163/497 (32%), Positives = 265/497 (53%), Gaps = 21/497 (4%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N+ + + L G YA V+ A +F ++P NV N M+ A A G +A F M
Sbjct: 104 NVVTWTALLSG-YARARLVDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRM 162
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
+ +++I+L V + K +++ E DV ++D ++ G +
Sbjct: 163 PVR----DAGSWNILLATLVRSGSVDKARELFGRMP----ERDVMAWTTMVDGVARSGKV 214
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
AR +F M ER+VVSW +MISGY ++DEA+ LF +M E + + N ++ +
Sbjct: 215 DEARVLFDSMPERNVVSWNAMISGYTRNHRIDEALDLFMKMP----ERDIASCNIMVTGF 270
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+ D A F M ++VTW M++G+ + K+ AL LF GML++G +PN
Sbjct: 271 IQNKDLKRARELFDEMPER----NVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQ 326
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
VT G L A ++ G+++H ++C+ D F SAL+++Y+KCG + AR LF++
Sbjct: 327 VTFLGALDACSDLAALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDL 386
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+R K++ SWN +I Y HG+ +I L+E+M E G R N+VT + +LSACSH GLV++G
Sbjct: 387 SREKDLISWNGIIAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEG 446
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY-VTNSMAGAFRNGC 463
L+IF SM + + EHY C++D+ R+GR+ +A L+ + + + S+ A GC
Sbjct: 447 LKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGC 506
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
N HG + + + +LSNI A+ G+W EA +R M + ++KQPG
Sbjct: 507 NAHGNESIGNLAARNLLQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPG 566
Query: 524 FSRVEKRNE---FVEKE 537
S +E N+ FV ++
Sbjct: 567 CSWIEVANKVHVFVARD 583
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 132/263 (50%), Gaps = 19/263 (7%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N LI + G + AR++F G + DVVSWT+++S Y + +A LF+R
Sbjct: 46 NRLIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDR---PDAR 102
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
N T+ A+++ YAR + A A F RM ++V+WN M+ +A + R +A L
Sbjct: 103 RNVVTWTALLSGYARARLVDEAEALFQRMPQR----NVVSWNTMLEAYAAAGRVGDACAL 158
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F M V N+ + +++ +GS+ RE L RM DV + ++D ++
Sbjct: 159 FDRMPVRDAGSWNILLATLVR----SGSVDKARE---LFGRMP-ERDVMAWTTMVDGVAR 210
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
G + +AR LF+ +NV SWNAMI Y ++ +D +++LF +M E + + + +
Sbjct: 211 SGKVDEARVLFDSMPERNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGF 270
Query: 392 LSACSHGGLVEKGLEIFRSMKER 414
+ +++ E+F M ER
Sbjct: 271 I----QNKDLKRARELFDEMPER 289
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 176/388 (45%), Gaps = 51/388 (13%)
Query: 147 DVSVGNALIDMYSKCGLLCSARRVF-HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
DV AL+ Y++ G+L AR +F R+VV+WT+++SGY VDEA LF+RM
Sbjct: 72 DVVSWTALVSAYARRGMLRDARELFDRPDARRNVVTWTALLSGYARARLVDEAEALFQRM 131
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE---------------------- 243
+ N ++N ++ +YA G A A F RM
Sbjct: 132 P----QRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRSGSVDKAR 187
Query: 244 ---GFVP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
G +P D++ W M+ G A+S + +EA LF M + N ++G + +
Sbjct: 188 ELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMISGYTRNHRIDE 247
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++ L +M D+ + + ++ + + LK AR LF+ +NV +W M+
Sbjct: 248 ALD-------LFMKMP-ERDIASCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTTMMN 299
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM-KERYGV 417
Y K + ++ LF ML G R N+VT + L ACS + +G ++ + + K +
Sbjct: 300 GYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQVHQMICKTTFQF 359
Query: 418 KISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVT 474
E + ++++ + G + A +DL R+ + N + A+ + HG A+
Sbjct: 360 DAFVE--SALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAH----HGVGIEAIL 413
Query: 475 MGEEFFEMGLRKPD-GFVMLSNICAADG 501
+ E+ E G R D +V+L + C+ G
Sbjct: 414 LYEKMQENGYRPNDVTYVVLLSACSHSG 441
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 25/240 (10%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C AL +GKQVH ++C + ++S L+ VYA CG++ AR +FD ++
Sbjct: 333 LDACSDLAALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREKDL 392
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVH 136
N ++ A A G EAI + M+E YR N T+ ++L AC GL+D +G ++
Sbjct: 393 ISWNGIIAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVD--EGLKI- 449
Query: 137 AVATQMGFE---NDVSVG------NALIDMYSKCGLLCSARRVFHGMFERDVVS--WTSM 185
FE ND S+ LID+ S+ G L A+R+ H + + W+++
Sbjct: 450 -------FESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSAL 502
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
+ G CN + L R L+ N TY + YA G A S M G
Sbjct: 503 LGG-CNAHGNESIGNLAARNLLQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGL 561
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N +I+ A + R +A KLF G + V+ T ++ A G ++ RE L R
Sbjct: 46 NRLIAELAAAGRVWDARKLFDGTPDWDV----VSWTALVSAYARRGMLRDARE---LFDR 98
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
+V T +AL+ Y++ + +A LF+ +NV SWN M+ Y G V + L
Sbjct: 99 PDARRNVVTWTALLSGYARARLVDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACAL 158
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F+RM + + L +++ + G V+K E+F M ER + + +VD +
Sbjct: 159 FDRMPVRDAGSWNILLATLVRS----GSVDKARELFGRMPERDVMA-----WTTMVDGVA 209
Query: 433 RSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
RSG++ EA L +P + N+M + I DL + M E
Sbjct: 210 RSGKVDEARVLFDSMPERNVVSWNAMISGYTRNHRIDEALDLFMKMPE 257
>gi|6691205|gb|AAF24543.1|AC007508_6 F1K23.11 [Arabidopsis thaliana]
Length = 841
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 172/522 (32%), Positives = 274/522 (52%), Gaps = 53/522 (10%)
Query: 15 YLDCLLGKCMKSKALRQGKQVHALLCTN----DLNIFSLKSKLVGVYAGCGDVNSARLVF 70
Y+ L + + S A + GK++HA + DLNI KL+ ++ CG ++ AR VF
Sbjct: 357 YIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNI---SIKLLILHLKCGCLSYARQVF 413
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC-----VG 125
D++P P + N+M+ G +E + M + + +T S+VLKA
Sbjct: 414 DELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTM 473
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
+L + VHA + E D + AL+D Y K G L SAR VF M + +VV TSM
Sbjct: 474 ILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSM 533
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
ISGY N V++A +F K
Sbjct: 534 ISGYMNQGFVEDAEEIFNTTK--------------------------------------- 554
Query: 246 VPDLVTWNAMISGFAQS-KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
V D+V +NAM+ GF++S + ++ ++ M +G PN T V+ A + S ++G+
Sbjct: 555 VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQ 614
Query: 305 EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHG 364
++HA + + G++ + GS+L+DMY+KCG + DAR +F+ + KNV SW +MI YGK+G
Sbjct: 615 QVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNG 674
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY 424
+ ++ELF RM E + N VT + LSACSH GLV+KG EIF SM+ Y +K EHY
Sbjct: 675 NPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHY 734
Query: 425 ACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
AC+VD++ R+G + +A++ R +P + + A + CN+HG +LA E F++
Sbjct: 735 ACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNA 794
Query: 485 -RKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
++P ++ LSN+ A++ +W +R++MK + + K G S
Sbjct: 795 DKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 836
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 171/560 (30%), Positives = 278/560 (49%), Gaps = 39/560 (6%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSA 66
P V L L ++S G+++H + + + LV +YA GD+ +A
Sbjct: 122 PAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAGGGDLFVMNNLVDMYAKGGDLKNA 181
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
R VFD+IP+ NV M+ G +E + F+ MR+ +++T + VL AC L
Sbjct: 182 RKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTML 241
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
+ +G+ +H + G ++ + A++DMY KCG AR+VF + D+V WT+MI
Sbjct: 242 GSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMI 301
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFT------------------------------ 216
GY +A++LF K + PN T
Sbjct: 302 VGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAV 361
Query: 217 -----YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
NA++ YA+ + A F R+ + D+VTWN++I+G+A++ ++AL L
Sbjct: 362 ENDVVMNALVDMYAKCKALSDAKGIFGRVLNK----DVVTWNSLIAGYAENDMGSDALML 417
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F M V G P+ ++V L A G + IG+ H + +++ +AL+++Y+K
Sbjct: 418 FSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNK 477
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
C L A+ +F +N +W AMIG YG G SI+LF ML++ ++ NE S+
Sbjct: 478 CADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSI 537
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
LS CSH G+V G + F SM + + S +HYAC+VD+L R+G + EA + ++++PM
Sbjct: 538 LSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQA 597
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRK 511
S+ AF +GC +H R + A + PD VM+SN+ + G W ++ +RK
Sbjct: 598 DTSIWQAFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCVMMSNLYTSYGRWDKSLAIRK 657
Query: 512 IMKEKNVQKQPGFSRVEKRN 531
+MKE+ + K PG S V N
Sbjct: 658 LMKERGLVKLPGCSSVGLEN 677
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 203/418 (48%), Gaps = 52/418 (12%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C +LR +HA LL L +KL+ YA GD+ SAR V D+ P+P+
Sbjct: 34 LLPACTTLPSLRA---LHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPD 90
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC-----NKFTFSIVLKACVGLLDIKKG 132
+ + A G EA+ MR RC + S+ LKA V D G
Sbjct: 91 AYTYKVALGWHAAAGRHAEAVAVHRDMRR---RCPAEQEDVVVLSLALKAAVRSADFGYG 147
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+++H + G D+ V N L+DMY+K G L +AR+VF + +R+VVSWTSM+SG
Sbjct: 148 RRLHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQN 206
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIAS----------------------------- 223
E +VLF M+ E + P+++T +++ +
Sbjct: 207 GLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFIT 266
Query: 224 ------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
Y + G++ A F ++ FV DLV W MI G+ Q+ +AL LF
Sbjct: 267 AAMLDMYVKCGEAEDARQVFDELS---FV-DLVLWTTMIVGYTQNGSPLDALLLFVDDKF 322
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
I PN+VT+ VL A ++ +GR IH + ++G + +AL+DMY+KC +L D
Sbjct: 323 MRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSD 382
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
A+ +F K+V +WN++I Y ++ M ++ LF M +G + +++++ LSAC
Sbjct: 383 AKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSAC 440
>gi|356521639|ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Glycine max]
Length = 699
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 278/533 (52%), Gaps = 53/533 (9%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYR 110
LV YA V+ A FD+I + N +++W M A+ N +E + F+ MRE
Sbjct: 173 LVDAYAKFARVDEATRAFDEI-HENDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVD 231
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N+FT ++ AC L + +GK VH + G + + +L++MY KCG + A +V
Sbjct: 232 GNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQDACKV 291
Query: 171 FH----GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------- 217
F ++RD+VSWT+MI GY A+ LF+ K G+ PN T
Sbjct: 292 FDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQ 351
Query: 218 -------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
NA++ YA+ G + A F M + D+V+W
Sbjct: 352 LGNSVMGKLLHGLAVKCGLDDHPVRNALVDMYAKCGVVSDARCVFEAMLEK----DVVSW 407
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N++ISGF QS EAL LF+ M + P+ VTV G+L A G + +G +H L +
Sbjct: 408 NSIISGFVQSGEAYEALNLFRRMGLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALK 467
Query: 313 MGLHID-VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
GL + ++ G+AL++ Y+KCG + AR +F+ KN +W AMIG YG G + S+
Sbjct: 468 DGLVVSSIYVGTALLNFYAKCGDARAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLT 527
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LF MLEE + NEV ++L+ACSH G+V +G +F M S +HYAC+VDML
Sbjct: 528 LFRDMLEELVEPNEVVFTTILAACSHSGMVGEGSRLFNLMCGELNFVPSMKHYACMVDML 587
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
R+G + EA D + ++P+ + S+ GAF +GC +H R +L ++ E+ + +V
Sbjct: 588 ARAGNLEEALDFIERMPVQPSVSVFGAFLHGCGLHSRFELGGAAIKKMLELHPDEACYYV 647
Query: 492 MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNESKA 544
++SN+ A+DG W + +R+++K++ + K PG S VE ++QN+S A
Sbjct: 648 LVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSS-------VEMDLQNDSYA 693
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 189/403 (46%), Gaps = 48/403 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ C K L QGK VH + N + + S L + L+ +Y CG++ A VFD+ + +
Sbjct: 240 LVSACTKLNWLHQGKWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQDACKVFDESSSSS 299
Query: 78 V--FMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+++W M ++ G A+ F + N T S +L +C L + GK
Sbjct: 300 YDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGK 359
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+H +A + G + D V NAL+DMY+KCG++ AR VF M E+DVVSW S+ISG+
Sbjct: 360 LLHGLAVKCGLD-DHPVRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSG 418
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------------ 223
+ EA+ LF RM LE P+ T I+++
Sbjct: 419 EAYEALNLFRRMGLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVG 478
Query: 224 ------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
YA+ GD+ AA F M + + VTW AMI G+ N +L LF+ ML
Sbjct: 479 TALLNFYAKCGDARAARMVFDSMGEK----NAVTWGAMIGGYGMQGDGNGSLTLFRDMLE 534
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC-RMGLHIDVFTGSALIDMYSKCGSLK 336
++PN V T +L A +G + G + L+C + + + ++DM ++ G+L+
Sbjct: 535 ELVEPNEVVFTTILAACSHSGMVGEGSRLFNLMCGELNFVPSMKHYACMVDMLARAGNLE 594
Query: 337 DARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+A E ++ +V+ + A + G H + ++MLE
Sbjct: 595 EALDFIERMPVQPSVSVFGAFLHGCGLHSRFELGGAAIKKMLE 637
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 179/417 (42%), Gaps = 55/417 (13%)
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
K +HA G ND+ + L+ +Y+ G L AR++F+ + RD+ + MI Y
Sbjct: 50 KTLHASFLIHGLTNDLLLSTKLLSLYASFGQLRHARKIFNHLPTRDLYCFKVMIRAYFLN 109
Query: 193 SKVDEAVVLFERMKL------------------------------------EGLEPNQFT 216
V L+ M+L + L + F
Sbjct: 110 DTPSGVVSLYRLMRLSLHPTPHDYVLFSIVFKSCAESRDFQTLTITHCHFVKSLPSDSFV 169
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
++ +YA+ + A F + D+V+W +MI + Q+ E L LF M
Sbjct: 170 LTCLVDAYAKFARVDEATRAFDEIHEND---DVVSWTSMIVAYVQNDCAREGLTLFNRMR 226
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+ + N TV ++ A + G+ +H V + G+ ++ + ++L++MY KCG+++
Sbjct: 227 EAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQ 286
Query: 337 DARTLFEITRI----KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
DA +F+ + +++ SW AMI Y + G ++ELF+ G+ N VT+ S+L
Sbjct: 287 DACKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLL 346
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPM 449
S+C+ G G ++ + + G+ A +VDM + G + +A ++ + + +
Sbjct: 347 SSCAQLGNSVMG-KLLHGLAVKCGLDDHPVRNA-LVDMYAKCGVVSDARCVFEAMLEKDV 404
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICAADGEWH 504
NS+ F + +L MG E F PD ++ + CA+ G H
Sbjct: 405 VSWNSIISGFVQSGEAYEALNLFRRMGLELFS-----PDAVTVVGILSACASLGMLH 456
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 178/569 (31%), Positives = 287/569 (50%), Gaps = 64/569 (11%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLV------GVYA 58
+FP N ++ +L +C K +R ++HA L L LK K+
Sbjct: 21 LFPENPKTL-----ILEQC---KTIRDLNEIHAHLIKTRL---LLKPKVAENLLESAAIL 69
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI 118
++ A +F +I P+ N M+ + EAI F M E + ++FTF
Sbjct: 70 LPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPC 129
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+LK C L + +G+Q+HA+ + GF + V N LI MY+ CG + ARRVF M ER+
Sbjct: 130 ILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERN 189
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERM--------------------------------- 205
V +W SM +GY +E V LF M
Sbjct: 190 VRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINR 249
Query: 206 --KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
+ +GL+ N +++ YA+ G + A F +M D+V W+AMISG++Q+
Sbjct: 250 YVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRR----DVVAWSAMISGYSQAS 305
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
R EAL LF M + I PN +T+ +L + + G+++ G+ +H + + + + V G+
Sbjct: 306 RCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGT 365
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
AL+D Y+KCGS++ + +F +KNV SW +I +G ++E F MLE+ +
Sbjct: 366 ALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEP 425
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
N+VT I VLSACSH GLV++G ++F SM +G++ EHY C+VD+L R+G + EA+
Sbjct: 426 NDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQF 485
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF-EMGLRKPD---GFVMLSNICAA 499
++ +P+ + C +H V +GEE ++ + +P +++LSNI A+
Sbjct: 486 IKNMPIQPNAVIWRTLLASCKVHKN----VEIGEESLKQLIILEPTHSGDYILLSNIYAS 541
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
G W +A +R MKEK ++K PG S +E
Sbjct: 542 VGRWEDALKVRGEMKEKGIKKTPGCSLIE 570
>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Brachypodium distachyon]
Length = 851
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 169/548 (30%), Positives = 276/548 (50%), Gaps = 38/548 (6%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSK-LVGVYAGCGDVNSARLV------- 69
+L C ++ A R+GK VHA L ++ L L G+YA DV +A V
Sbjct: 175 VLHACGRAAARREGKAVHAHALKAGLVDAHPLVPGFLAGMYAEGADVAAATAVLLRATPP 234
Query: 70 -----FDKI------------------------PNPNVFMLNWMVMASAFTGNFQEAIGY 100
+D + P P + N ++ A G +EA+
Sbjct: 235 PRSVAWDAVVACCVRLGLVDDAMELAGRMARDGPEPTLATWNAVLSGCARHGRDREALAV 294
Query: 101 FSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSK 160
M E + T S +LK+ ++ G +VH + G D G AL+DMY+K
Sbjct: 295 LRRMLEQGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYTGTALVDMYAK 354
Query: 161 CGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAI 220
CG L ARRVF + R++ +W S+++G+ + + A+ L ERMK L+PN T+N +
Sbjct: 355 CGRLDCARRVFDTLEHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNVTTWNGL 414
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I Y+ G S+ A ++ A G P++V+W ++ISG + ++ FK M G+
Sbjct: 415 ITGYSLNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKDGV 474
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+P+ VT+ +L+A ++ G+E+H R D+ G+ALIDMYSK GSL A+
Sbjct: 475 QPSLVTMLVLLRACAGLALLKKGKELHCFALRRAYDCDMVVGTALIDMYSKAGSLTSAKR 534
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F + KN+ NAM+ HG +I LF + G++ + +T ++L+AC GL
Sbjct: 535 IFGRIQNKNLVCCNAMLTGLAVHGQSHEAITLFHDLWRSGLKPDSITFTALLTACRSMGL 594
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
+ +G E F +M+ +YGV + E+YAC+VD+L RSG + EA L+ + P+ S+ GA
Sbjct: 595 ITEGWEYFDNMETKYGVVPTAENYACMVDLLARSGYLDEAMALIERSPVDPGASLWGALL 654
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
GC+IHG DLA F + ++M+ ++ + + EA++L+ MK + V
Sbjct: 655 TGCSIHGNLDLAEVAARNLFRLEPYNSANYLMIMSLYEHEQMYDEADSLKYAMKARGVNT 714
Query: 521 QPGFSRVE 528
+PG+S ++
Sbjct: 715 RPGWSWIQ 722
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 170/373 (45%), Gaps = 38/373 (10%)
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ + N V A G + EAIG F M+ + + + VL AC ++GK VH
Sbjct: 133 DAVLWNKQVAMLAEAGEWDEAIGAFREMQARGVAADGYALARVLHACGRAAARREGKAVH 192
Query: 137 AVATQMGF-ENDVSVGNALIDMYSKCGLLCSARRVF-HGMFERDVVSWTSMISGYCNVSK 194
A A + G + V L MY++ + +A V V+W ++++ +
Sbjct: 193 AHALKAGLVDAHPLVPGFLAGMYAEGADVAAATAVLLRATPPPRSVAWDAVVACCVRLGL 252
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
VD+A+ L RM +G EP T+NA+++ AR G A A RM +G PD
Sbjct: 253 VDDAMELAGRMARDGPEPTLATWNAVLSGCARHGRDREALAVLRRMLEQGLWPD------ 306
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
TV+ +L++ G ++ G E+H R G
Sbjct: 307 -----------------------------ATTVSSLLKSVANAGMVRHGMEVHCFFLRHG 337
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L D +TG+AL+DMY+KCG L AR +F+ +N+A+WN+++ + G ++++EL E
Sbjct: 338 LVPDAYTGTALVDMYAKCGRLDCARRVFDTLEHRNLATWNSLVAGHAYAGQFEAALELVE 397
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
RM + N T +++ S GL + + + R +K G+ + + ++ C +
Sbjct: 398 RMKRNRLDPNVTTWNGLITGYSLNGLSSQAMLLLRQIKA-AGLTPNVVSWTSLISGSCHN 456
Query: 435 GRMVEAYDLLRQV 447
G ++++ +++
Sbjct: 457 GEYEDSFNFFKEM 469
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 270/547 (49%), Gaps = 66/547 (12%)
Query: 52 KLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC 111
+L+ V GD N AR +FD IP P+ + ++ A G EAI +S ++E +
Sbjct: 103 RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP 162
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+ F KAC D + K+VH AT+ G +DV VGNALI Y KC + ARRVF
Sbjct: 163 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 222
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----R 226
+ RDVVSWTS+ S Y + + +F M G++PN T ++I+ + A +
Sbjct: 223 DDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 282
Query: 227 RGDSNAAFAFFSRMTAEGFV------------------------P--DLVTWNAMISGFA 260
G FA M FV P D+V+WN +++ +
Sbjct: 283 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 342
Query: 261 QSK-----------------------------------RENEALKLFKGMLVSGIKPNNV 285
++K R EA+++F+ M G KPN +
Sbjct: 343 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 402
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T++ +L A + ++++G+EIH V R D+ + +AL+ MY+KCG L +R +F++
Sbjct: 403 TISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM 462
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
R K+V +WN MI HG ++ LF++ML ++ N VT VLS CSH LVE+G+
Sbjct: 463 RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGV 522
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
+IF SM + V+ HY+CVVD+ R+GR+ EAY ++ +PM T S GA C +
Sbjct: 523 QIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRV 582
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
+ +LA ++ FE+ P +V L NI W EA +R +MKE+ + K PG S
Sbjct: 583 YKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCS 642
Query: 526 RVEKRNE 532
++ N+
Sbjct: 643 WLQVGNK 649
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 155/328 (47%), Gaps = 37/328 (11%)
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+G LI + G AR++F + + D + +++IS +EA+ ++ ++ G
Sbjct: 100 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 159
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
++P+ + A + A GD+ T G + D+ NA+I + + K A
Sbjct: 160 IKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGAR 219
Query: 270 KLFKGMLV-------------------------------SGIKPNNVTVTGVLQAGGLTG 298
++F ++V SG+KPN +TV+ +L A
Sbjct: 220 RVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELK 279
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++ G+EIH R G+ +++F SAL+ +Y+KC S+++AR +F++ ++V SWN ++
Sbjct: 280 DLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLT 339
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
Y K+ + LF +M +G+RA+E T +V+ C G E+ +E+FR M ++ G K
Sbjct: 340 AYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKM-QKMGFK 398
Query: 419 -----ISKEHYACVVDMLCRSGRMVEAY 441
IS AC R G+ + Y
Sbjct: 399 PNEITISSILPACSFSENLRMGKEIHCY 426
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 39/295 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + K L+ GK++H + + N+F + S LV +YA C V AR+VFD +P+
Sbjct: 271 ILPACAELKDLKSGKEIHGFAVRHGMVVNLF-VCSALVSLYAKCLSVREARMVFDLMPHR 329
Query: 77 NVFMLNWMVMA-----------SAF------------------------TGNFQEAIGYF 101
+V N ++ A S F G +EA+ F
Sbjct: 330 DVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMF 389
Query: 102 SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC 161
M++ ++ N+ T S +L AC +++ GK++H + D++ AL+ MY+KC
Sbjct: 390 RKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKC 449
Query: 162 GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII 221
G L +R VF M +DVV+W +MI EA+ LF++M L ++PN T+ ++
Sbjct: 450 GDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVL 509
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGM 275
+ + F+ M + V PD ++ ++ ++++ R NEA K +GM
Sbjct: 510 SGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGM 564
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 112/216 (51%), Gaps = 8/216 (3%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTN-DLNIFSLKSKLVGVYAG 59
M ++ F N ++++ +L C S+ LR GK++H + + + + + L+ +YA
Sbjct: 392 MQKMGFKPNEITIS---SILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAK 448
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
CGD+N +R VFD + +V N M++A+A GN +EA+ F M + N TF+ V
Sbjct: 449 CGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGV 508
Query: 120 LKACVGLLDIKKGKQV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FER 177
L C +++G Q+ +++ E D + + ++D+YS+ G L A + GM E
Sbjct: 509 LSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEP 568
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN 213
+W ++++ C V K E + + KL +EPN
Sbjct: 569 TASAWGALLAA-CRVYKNVELAKISAK-KLFEIEPN 602
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 173/505 (34%), Positives = 253/505 (50%), Gaps = 81/505 (16%)
Query: 29 LRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+ G QVHA + L +L SK+V YA GD++S+ VF+ I
Sbjct: 86 LKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGI-------------- 131
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
G++ FTF VLK+ V LL + GK VH + ++G + D
Sbjct: 132 ----GDY-------------------FTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFD 168
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
+ V +LI +Y KCG + A +VF M RDV SW
Sbjct: 169 LYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSW------------------------- 203
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
NA++A Y + G +AA A F RM ++V+W MISG++QS +
Sbjct: 204 ----------NALLAGYTKSGCIDAALAIFERMPWR----NIVSWTTMISGYSQSGLAQQ 249
Query: 268 ALKLFKGMLV--SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
AL LF M+ SG++PN VT+ VL A +++ GR+IH L CRMGL+ + AL
Sbjct: 250 ALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIAL 309
Query: 326 IDMYSKCGSLKDARTLFE-ITR-IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
MY+KCGSL DAR F+ + R KN+ +WN MI Y +G ++ F M++ G++
Sbjct: 310 TAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQP 369
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
+++T +LS CSH GLV+ GL+ F M Y + EHYACV D+L R+GR+ EA L
Sbjct: 370 DDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKL 429
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ ++PM S+ G+ C H ++A T + F + +V+LSN+ A G W
Sbjct: 430 VGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRW 489
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVE 528
E + LR I+K + +K PG S +E
Sbjct: 490 QEVDKLRAIVKSQGTKKSPGCSWIE 514
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 144/311 (46%), Gaps = 34/311 (10%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIF---------------------SLK 50
SV L +GKC+ LR G Q + T+ + ++ S
Sbjct: 144 SVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSW 203
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF--TGNFQEAIGYFSLM--RE 106
+ L+ Y G +++A +F+++P N+ ++W M S + +G Q+A+ F M +
Sbjct: 204 NALLAGYTKSGCIDAALAIFERMPWRNI--VSWTTMISGYSQSGLAQQALSLFDEMVKED 261
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
R N T VL AC L +++G+Q+H +A +MG ++ SV AL MY+KCG L
Sbjct: 262 SGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVD 321
Query: 167 ARRVFHGM--FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
AR F + E+++++W +MI+ Y + +AV F M G++P+ T+ +++
Sbjct: 322 ARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGC 381
Query: 225 ARRGDSNAAFAFFSRM-TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ G + +F+ M T P + + + ++ R EA KL M + P
Sbjct: 382 SHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPM----PA 437
Query: 284 NVTVTGVLQAG 294
++ G L A
Sbjct: 438 GPSIWGSLLAA 448
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 10/217 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKI--PN 75
+L C + L +G+Q+H L C LN S+ L +YA CG + AR FDK+
Sbjct: 274 VLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNE 333
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGK 133
N+ N M+ A A G+ +A+ F M + + + TF+ +L C GL+D+ K
Sbjct: 334 KNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGL-K 392
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS-WTSMISGYCNV 192
+ ++T V + D+ + G L A ++ M S W S+++ C
Sbjct: 393 YFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA-CRK 451
Query: 193 SKVDEAVVLFERMKLEGLEP-NQFTYNAIIASYARRG 228
+ E R KL LEP N Y + YA G
Sbjct: 452 HRNLEMAETAAR-KLFVLEPENTGNYVLLSNMYAEAG 487
>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 824
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 273/525 (52%), Gaps = 58/525 (11%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN---------FQEAIGYF 101
S + +YA GD+ S+R VFD N+ + W M + N F EAIG
Sbjct: 259 SSAISMYAELGDLESSRRVFDSCVERNIEV--WNTMIGVYVQNDCLVESIELFLEAIG-- 314
Query: 102 SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC 161
+E + ++ TF + A GL ++ G+Q H ++ E + + N+L+ MYS+C
Sbjct: 315 --SKEIV--SDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVIINSLMVMYSRC 370
Query: 162 GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII 221
G + + VFH M ERDVVSW +MIS + DE ++L M+ +G + + T A++
Sbjct: 371 GFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL 430
Query: 222 AS----------------------------------YARRGDSNAAFAFFSRMTAEGFVP 247
++ YA+ G + F G+
Sbjct: 431 SAASNLRNKEIGKQTHGFLIRQGIQFEGMNSYLIDMYAKSGLIRISQKLFE---GSGYAE 487
Query: 248 -DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
D TWN+MISG+ Q+ E +F+ ML I+PN VTV +L A GS+ +G+++
Sbjct: 488 RDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQL 547
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H R L +VF SAL+DMYSK G++K A +F T+ +N ++ MI YG+HGM
Sbjct: 548 HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMG 607
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
+ +I LF M E G++ + + ++VLSACS+ GLV++GL+IF M+E Y ++ S EHY C
Sbjct: 608 ERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKIFEDMREVYNIQPSSEHYCC 667
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVT-NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
+ DML R GR+ EAY+ ++ + + G+ C +HG +LA T+ E ++
Sbjct: 668 ITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCRLHGELELAETVSERLAKLDKG 727
Query: 486 KP-DGF-VMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
K G+ V+LSN+ A + W + +RK M+EK ++K+ G S +E
Sbjct: 728 KNFSGYEVLLSNMYAEEQNWKSVDRVRKGMREKGLKKEVGRSGIE 772
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 156/565 (27%), Positives = 254/565 (44%), Gaps = 84/565 (14%)
Query: 20 LGKCMKSKALRQGKQVHALL--CTND---------LNIFSLKSKLVGVYAGCGDVNSARL 68
L C ++K L+ GK VH L C + +N++ G C + + R
Sbjct: 114 LKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRK 173
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
VFD + NV N ++ TG EA F++M + + +F V A
Sbjct: 174 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSRS 233
Query: 129 IKKGKQVHAVATQMGFE--NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
IKK + + ++G E D+ V ++ I MY++ G L S+RRVF ER++ W +MI
Sbjct: 234 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMI 293
Query: 187 SGY----CNVSKV--------------DEAVVLFERMKLEGLEP----NQF--------- 215
Y C V + DE L + GL+ QF
Sbjct: 294 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFR 353
Query: 216 -----TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
N+++ Y+R G +F F M D+V+WN MIS F Q+ ++E L
Sbjct: 354 ELPIVIINSLMVMYSRCGFVQKSFGVFHSMRER----DVVSWNTMISAFVQNGLDDEGLM 409
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
L M G K + +TVT +L A + +IG++ H + R G+ + S LIDMY+
Sbjct: 410 LVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEGMN-SYLIDMYA 468
Query: 331 KCGSLKDARTLFEITRI--KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
K G ++ ++ LFE + ++ A+WN+MI Y ++G + + +F +MLE+ +R N VT+
Sbjct: 469 KSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTV 528
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH------YACVVDMLCRSGRMVEAYD 442
S+L ACS G V+ G K+ +G I + + +VDM ++G + A +
Sbjct: 529 ASILPACSQVGSVDLG-------KQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEN 581
Query: 443 LLRQVP-----MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSN 495
+ Q Y T + G HG + A+++ E+G+ KPD FV + +
Sbjct: 582 MFSQTKERNSVTYTTMIL------GYGQHGMGERAISLFLSMQELGI-KPDAIAFVAVLS 634
Query: 496 ICAADGEWHEAENLRKIMKE-KNVQ 519
C+ G E + + M+E N+Q
Sbjct: 635 ACSYSGLVDEGLKIFEDMREVYNIQ 659
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 194/436 (44%), Gaps = 78/436 (17%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF--IYRCNKFTFSI 118
G+ AR +FD IP P + N +++ EA+ ++S M++ +C+ +T+S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSS 112
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC------GLLC----SAR 168
LKAC ++K GK VH + + V N+L++MY C L C R
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVR 172
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
+VF M ++VV+W ++IS Y + EA F M ++P+ ++ + + A
Sbjct: 173 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSR 232
Query: 229 DSNAAFAFFSRMTAEG--FVPDLV-------------------------------TWNAM 255
A F+ M G +V DL WN M
Sbjct: 233 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTM 292
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVT---VTGVLQAGGLTG--SIQIGREIHALV 310
I + Q+ E+++LF + I + VT +L A ++G +++GR+ H V
Sbjct: 293 IGVYVQNDCLVESIELF----LEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFV 348
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
+ + + ++L+ MYS+CG ++ + +F R ++V SWN MI + ++G+ D +
Sbjct: 349 SKNFRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGL 408
Query: 371 ELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLEIFRSMKERYGVKI 419
L M ++G + + +T+ ++LSA S HG L+ +G++ F M
Sbjct: 409 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQ-FEGMN------- 460
Query: 420 SKEHYACVVDMLCRSG 435
+ ++DM +SG
Sbjct: 461 -----SYLIDMYAKSG 471
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 6/278 (2%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGC 60
M + F I+ ++V LL + GKQ H L + + S L+ +YA
Sbjct: 414 MQKQGFKIDYITVT---ALLSAASNLRNKEIGKQTHGFLIRQGIQFEGMNSYLIDMYAKS 470
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSI 118
G + ++ +F+ W M S +T G+ +E F M E R N T +
Sbjct: 471 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVAS 530
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+L AC + + GKQ+H + + + +V V +AL+DMYSK G + A +F ER+
Sbjct: 531 ILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERN 590
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
V++T+MI GY + A+ LF M+ G++P+ + A++++ + G + F
Sbjct: 591 SVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKIFE 650
Query: 239 RM-TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
M P + + + R NEA + KG+
Sbjct: 651 DMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGL 688
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 23/272 (8%)
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
L P + + ++ + G+ A F + P V WN +I GF + +EAL
Sbjct: 35 LTPQTPSIRSRLSKICQEGNPQLARQLFDAIPK----PTTVLWNTIIIGFICNNLPHEAL 90
Query: 270 KLFKGMLVSG--IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
+ M + K + T + L+A T +++ G+ +H + R + ++L++
Sbjct: 91 LFYSRMKKTAPFTKCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMN 150
Query: 328 MYSKC----GSLKD------ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
MY C GS D R +F+ R KNV +WN +I Y K G + F M+
Sbjct: 151 MYVSCLNAPGSELDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMM 210
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY--ACVVDMLCRSG 435
++ + V+ ++V A + ++K +F + + G + K+ + + + M G
Sbjct: 211 RMEIKPSPVSFVNVFPAVATSRSIKKA-NVFYGLMLKLGDEYVKDLFVVSSAISMYAELG 269
Query: 436 RMVEA---YDLLRQVPMYVTNSMAGAF-RNGC 463
+ + +D + + V N+M G + +N C
Sbjct: 270 DLESSRRVFDSCVERNIEVWNTMIGVYVQNDC 301
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 266/505 (52%), Gaps = 11/505 (2%)
Query: 27 KALRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
K L+ K +HA L S + +KL+ +Y+ G + A VFD+I PN ++ +
Sbjct: 13 KTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSL 72
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ + EA F MR FT S VLKA L K G+ V+ A
Sbjct: 73 IHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFAFDEMC 132
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
E D+ N +I Y + AR+ F M ER+VVSWTSMI GY + EA VLF+
Sbjct: 133 EKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDS 192
Query: 205 MKLEGLEPNQFTYNAIIASYARRGD-SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
M ++ L ++N +++ Y GD +N A F +M + +LVTW+ MI G+A++
Sbjct: 193 MPVKDLA----SWNVMVSGYMDIGDYTNGARCLFDQMPMK----NLVTWSTMIGGYARNG 244
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
+ +AL+LF+ IKP+ + G++ A G I I L D+ +
Sbjct: 245 QPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFT 304
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
+LIDMY+KCGS++ A +FE+ K++ ++ MI HG+ +I LF++M ++
Sbjct: 305 SLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKP 364
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
+ VT + VL+AC+HGGLV++G + F+ M E +G++ S++HYACVVD+L R G + EAY+L
Sbjct: 365 DSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNL 424
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+R +P+ + + GA C +H LA E F++ +++LSNI AA G W
Sbjct: 425 IRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRW 484
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVE 528
+R ++E V+K G S +E
Sbjct: 485 GSVAKVRAKIREHRVRKNRGSSWIE 509
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 264/502 (52%), Gaps = 33/502 (6%)
Query: 28 ALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
+L+ K VHA L L+ S L +K++ G+ N + +F + PN+F+ N M+
Sbjct: 22 SLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIH 81
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
+FQE+I + MR+ + FTF +LKAC LLD K G ++H + + G E+
Sbjct: 82 GLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCES 141
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D V +L+ +Y KCG + +A +VF + E++V +WT++ISGY V K EA+ +F R
Sbjct: 142 DAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRR-- 199
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
A + F M + D+V+W++MI G+A +
Sbjct: 200 --------------------------ACSVFDGMLEK----DIVSWSSMIQGYASNGLPK 229
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
EAL LF ML G +P+ + GVL A G++++G L+ R + G+ALI
Sbjct: 230 EALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALI 289
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
DMY+KCG + A +F R K++ WNA I G V ++ LF +M + G+ +
Sbjct: 290 DMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGN 349
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T + +L AC+H GLV++G + F SM+ + + EHY C+VD+L R+G + EA+ L++
Sbjct: 350 TFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKS 409
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
+PM + GA GC +H L + ++ + +V+LSNI +A +W +A
Sbjct: 410 MPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDA 469
Query: 507 ENLRKIMKEKNVQKQPGFSRVE 528
+R IM E+ ++K PG+S +E
Sbjct: 470 AKIRSIMSERGIKKVPGYSWIE 491
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 256/516 (49%), Gaps = 40/516 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
L+ Y G V SA +FD++ P+V N M+ G + F M +
Sbjct: 511 LIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVD 570
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
T VL A + ++ G+ +H + F +V N L+DMYSKCG L A VF
Sbjct: 571 LTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFV 630
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------- 217
M + +VSWTS I+ Y +A+ LF+ M+ +G+ P+ +T
Sbjct: 631 KMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDK 690
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
NA+I YA+ G A FS++ V D+V+WN MI
Sbjct: 691 GRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP----VKDIVSWNTMIG 746
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
G++Q+ NEAL+LF M KP+++T+ VL A ++ GREIH + R G
Sbjct: 747 GYSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFS 805
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
D+ AL+DMY+KCG L A+ LF++ K++ SW MI YG HG + +I F M
Sbjct: 806 DLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMR 865
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
G+ +E + +L+ACSH GL+ +G + F SM+ GV+ EHYACVVD+L R G +
Sbjct: 866 IAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNL 925
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
+AY + +P+ ++ G +GC IH LA + E FE+ +V+L+N+
Sbjct: 926 SKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVY 985
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
A +W E + LRK M+++ ++ PG S +E +F
Sbjct: 986 AEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKF 1021
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 281/532 (52%), Gaps = 42/532 (7%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLV 69
L +N +L C + K+L GK+VH+++ +N ++I +L +KLV +Y CGD+ R +
Sbjct: 367 LGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKI 426
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
FDKI N VF+ N ++ A GNF+E++ F M++ N +TF+ VLK L +
Sbjct: 427 FDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKV 486
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
K+ K+VH ++GF ++ +V N+LI Y K G + SA +F + E DVVSW SMI+G
Sbjct: 487 KECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING- 545
Query: 190 CNVSKVD-EAVVLFERMKLEGLEPNQFTYNAIIASYARRGD------------------- 229
C V+ + +F +M + G+E + T +++ ++A G+
Sbjct: 546 CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEE 605
Query: 230 ---SNAAFAFFSRM-----TAEGFV----PDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
SN +S+ E FV +V+W + I+ + + ++A+ LF M
Sbjct: 606 VVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQS 665
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G++P+ TVT ++ A + S+ GR++H+ V + G+ ++ +ALI+MY+KCGS+++
Sbjct: 666 KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEE 725
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
AR +F +K++ SWN MIG Y ++ + + ++ELF M ++ + +++T+ VL AC+
Sbjct: 726 ARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAG 784
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYAC-VVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
++KG EI + R S H AC +VDM + G +V A L +P S
Sbjct: 785 LAALDKGREIHGHILRRG--YFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWT 842
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEA 506
G +HG + A++ E G+ +PD F ++ N C+ G +E
Sbjct: 843 -VMIAGYGMHGFGNEAISTFNEMRIAGI-EPDESSFSVILNACSHSGLLNEG 892
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 205/448 (45%), Gaps = 51/448 (11%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G+ + AI + + + N ++ VL+ C ++ GK+VH+V G D ++G
Sbjct: 350 GDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALG 407
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
L+ MY CG L R++F + V W ++S Y + E+V LF++M+ G+
Sbjct: 408 AKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVV 467
Query: 212 PNQFTY-----------------------------------NAIIASYARRGDSNAAFAF 236
N +T+ N++IA+Y + G +A
Sbjct: 468 GNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNL 527
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F ++ PD+V+WN+MI+G + L++F ML+ G++ + T+ VL A
Sbjct: 528 FDELSE----PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWAN 583
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
G++ +GR +H + +V + L+DMYSKCG+L A +F + SW +
Sbjct: 584 IGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTST 643
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I Y + G+ +I LF+ M +G+R + T+ S++ AC+ ++KG ++ S + G
Sbjct: 644 IAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV-HSYVIKNG 702
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAV 473
+ + +++M + G + EA + ++P + N+M G + + +L +
Sbjct: 703 MGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFL 762
Query: 474 TMGEEFFEMGLRKPDGFVMLSNICAADG 501
M ++F KPD M + A G
Sbjct: 763 DMQKQF------KPDDITMACVLPACAG 784
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 159/280 (56%), Gaps = 11/280 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C S +L +G+ VH+ + N + + + + L+ +YA CG V ARLVF KIP +
Sbjct: 678 IVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKD 737
Query: 78 VFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+ ++W M ++ N EA+ F M++ ++ + T + VL AC GL + KG+++
Sbjct: 738 I--VSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREI 794
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + G+ +D+ V AL+DMY+KCGLL A+ +F + ++D++SWT MI+GY
Sbjct: 795 HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 854
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNA 254
+EA+ F M++ G+EP++ +++ I+ + + G N + FF+ M E G P L +
Sbjct: 855 NEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYAC 914
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
++ A+ ++A K + M IKP + T+ GVL +G
Sbjct: 915 VVDLLARMGNLSKAYKFIESM---PIKP-DTTIWGVLLSG 950
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 157/458 (34%), Positives = 242/458 (52%), Gaps = 35/458 (7%)
Query: 110 RCNKFTFSIVLKACVGLLD-IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
R + +T LKAC L +++G Q HAVA + GF V V NAL+ Y CG AR
Sbjct: 114 RPDGYTLPAALKACARLGGGLREGCQAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDAR 173
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
+VF M ERDVVSWT+++S + EA+ + M + PN+ T +++ + G
Sbjct: 174 KVFDEMAERDVVSWTALLSAFTRGGMFMEALGVLAEMDVT---PNEVTLASVLVACGNLG 230
Query: 229 DSNAAFA----FFSRMTAEGFV---------------------------PDLVTWNAMIS 257
+ A A +F R + D+V+W MIS
Sbjct: 231 TARAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMIS 290
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
G Q KR +EAL++F M +SG+KP+ V ++ VL A G+++ GR +H + R G+
Sbjct: 291 GLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEW 350
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
DV G++++DMY KCG L A ++F+ +KNV+SWNA+I + HG +++ F+RM+
Sbjct: 351 DVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGREALDCFDRMV 410
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
G+ NEVT I+VL AC H GLV++G ++F M + Y + ++HY C+VD+L R+G +
Sbjct: 411 ASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLI 470
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
EAYD+++ +PM + C HGR D + + E+ +V+LSN+
Sbjct: 471 QEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQILMHIHELESSGNGIYVLLSNMY 530
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
A W + R M EK +QK+PG S +E + E
Sbjct: 531 AVSDRWADVGKARGFMNEKGMQKEPGSSVIEVNGKTCE 568
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 190/392 (48%), Gaps = 53/392 (13%)
Query: 29 LRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
LR+G Q HA+ L +++ LV Y CG AR VFD++ +V ++W +
Sbjct: 134 LREGCQAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDV--VSWTALL 191
Query: 88 SAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
SAFT G F EA+G ++ E N+ T + VL AC L + GK VH + E
Sbjct: 192 SAFTRGGMFMEALG---VLAEMDVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKE 248
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
++ VGNAL+DMY KC L ARRVF + RD+VSWT MISG + EA+ +F M
Sbjct: 249 LNLIVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAM 308
Query: 206 KLEGLEPNQFTYNAIIAS-----------------------------------YARRGDS 230
++ G++P++ + ++++ Y + G
Sbjct: 309 QISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCL 368
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+ A + F M + ++ +WNA+I+GFA R EAL F M+ SG+ PN VT V
Sbjct: 369 DTAVSIFQEMP----LKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITV 424
Query: 291 LQAGGLTGSIQIGREIHALVC---RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
L A +G +Q GR++ L+ ++ D + ++D+ + G +++A + + +
Sbjct: 425 LGACCHSGLVQEGRQLFELMTKSYKLSPWEDHY--GCMVDLLGRAGLIQEAYDVIKAMPM 482
Query: 348 K-NVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+ V +W ++ HG +D S ++ + E
Sbjct: 483 RPGVFTWVTLLSACQAHGRMDFSQQILMHIHE 514
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 9/300 (3%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLC--TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L +L C R GK VH +LN+ + + L+ +Y C ++ AR VFD +
Sbjct: 219 LASVLVACGNLGTARAGKAVHGWYFRREKELNLI-VGNALLDMYVKCEKLDLARRVFDML 277
Query: 74 PNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
++ ++W VM S EA+ F+ M+ + +K S VL AC L ++
Sbjct: 278 LARDI--VSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALES 335
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G+ VH + G E DV VG +++DMY KCG L +A +F M ++V SW ++I+G+
Sbjct: 336 GRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFAL 395
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT-AEGFVPDLV 250
+ EA+ F+RM GL PN+ T+ ++ + G F MT + P
Sbjct: 396 HGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWED 455
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG-LTGSIQIGREIHAL 309
+ M+ ++ EA + K M + VT+ QA G + S QI IH L
Sbjct: 456 HYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQILMHIHEL 515
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVS-----GIKPNNVTVTGVLQA-GGLTGSIQIGRE 305
+NA+IS + + A + F +LV+ G +P+ T+ L+A L G ++ G +
Sbjct: 80 FNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGLREGCQ 139
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
HA+ + G V +AL+ Y CG DAR +F+ ++V SW A++ + + GM
Sbjct: 140 AHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGM 199
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI----FRSMKE 413
+E + E + NEVTL SVL AC + G G + FR KE
Sbjct: 200 F---MEALGVLAEMDVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKE 248
>gi|147818972|emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
Length = 1817
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 254/477 (53%), Gaps = 41/477 (8%)
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
A N +EA+ F M + KF L +C LL+ G Q+HA Q GFE+++
Sbjct: 1292 AKHANVREALESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNL 1351
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
+ +AL+D+Y+KC + A+RVF GM + D VSWTS+ISG+ + EA++ F+ M
Sbjct: 1352 FLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGS 1411
Query: 209 GLEPNQFTYNAIIAS------------------------------------YARRGDSNA 232
++PN TY + I++ Y++ G +
Sbjct: 1412 QIKPNCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQ 1471
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
A F D + +N+MISG++Q+ EALKLF M +G+ P + T+T +L
Sbjct: 1472 AVLLFGTTIER----DNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILN 1527
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A G +Q GR++H+LV +MG +VF SAL+DMYSKCGS+ +AR +F KN
Sbjct: 1528 ACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVL 1587
Query: 353 WNAMIGCYGKHGMVDSSIELFERML-EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
W +MI Y + G + LFER++ EEG + + +VL+AC+H G ++KG++ F M
Sbjct: 1588 WTSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQM 1647
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
+ YG+ + YAC+VD+ R+G + +A +L+ P + M G+F + C ++G +L
Sbjct: 1648 RRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAEL 1707
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
++ F+M +V +++I A G W E +RK+MK+K ++K G+S VE
Sbjct: 1708 GREAADKLFKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVE 1764
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 161/336 (47%), Gaps = 41/336 (12%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNF--QEAIGYFSLMREFI 108
S L+ Y+ CG ++ A L+F + + N M+ S ++ N +EA+ F MR
Sbjct: 1457 SCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMI--SGYSQNLXGEEALKLFVZMRNNG 1514
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
T + +L AC L +++G+QVH++ +MG E++V V +AL+DMYSKCG + AR
Sbjct: 1515 LXPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEAR 1574
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM-KLEGLEPNQFTYNAIIASYARR 227
VF E++ V WTSMI+GY + E + LFER+ EG P+ + A++ +
Sbjct: 1575 CVFXQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHA 1634
Query: 228 GDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G + +F++M + G VPDL + ++ + ++ +A +L M +PN+V
Sbjct: 1635 GFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKEL---MEAXPXEPNSVM 1691
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
L + L G ++GRE A LF++
Sbjct: 1692 WGSFLSSCKLYGEAELGREA-------------------------------ADKLFKMEP 1720
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+ A + AM Y + G+ +E+ + M ++G+R
Sbjct: 1721 C-STAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLR 1755
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 196/440 (44%), Gaps = 55/440 (12%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C K G Q+HA + N+F L S LV +YA C + A+ VFD + +
Sbjct: 1323 LNSCAKLLNWGLGVQIHARIIQTGFEDNLF-LNSALVDLYAKCDAIVDAKRVFDGMEKHD 1381
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI-KKGKQ 134
++W + S F+ G +EAI +F M + N T+ + AC GL I +
Sbjct: 1382 --QVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSXISACTGLETIFDQCAL 1439
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+HA ++GF V + LID YSKCG + A +F ERD + + SMISGY
Sbjct: 1440 LHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLX 1499
Query: 195 VDEAVVLFERMKLEGLEP-----------------------------------NQFTYNA 219
+EA+ LF M+ GL P N F +A
Sbjct: 1500 GEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSA 1559
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV-S 278
++ Y++ G + A F + + + V W +MI+G+AQS R E L LF+ ++
Sbjct: 1560 LLDMYSKCGSIDEARCVFXQAVEK----NTVLWTSMITGYAQSGRGPEGLGLFERLVXEE 1615
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR-MGLHIDVFTGSALIDMYSKCGSLKD 337
G P+++ T VL A G + G + + R GL D+ + L+D+Y + G L+
Sbjct: 1616 GFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRK 1675
Query: 338 ARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERM--LEEGMRANEVTLISVLSA 394
A+ L E + N W + + +G + E +++ +E A V + S+
Sbjct: 1676 AKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAPYVAMASIY-- 1733
Query: 395 CSHGGLVEKGLEIFRSMKER 414
+ GL + +EI + MK++
Sbjct: 1734 -AQAGLWSEVVEIRKLMKQK 1752
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 13/221 (5%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L +L C L+QG+QVH+L+ ++ N+F + S L+ +Y+ CG ++ AR VF +
Sbjct: 1522 LTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVV-SALLDMYSKCGSIDEARCVFXQA 1580
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFS-LMREFIYRCNKFTFSIVLKAC--VGLLDIK 130
N + M+ A +G E +G F L+ E + + F+ VL AC G LD K
Sbjct: 1581 VEKNTVLWTSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLD-K 1639
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGY 189
+ + G D+ L+D+Y + G L A+ + E + V W S +S
Sbjct: 1640 GIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSS- 1698
Query: 190 CNVSKVDEAVVLFERM-KLEGLEP-NQFTYNAIIASYARRG 228
C + EA + E KL +EP + Y A+ + YA+ G
Sbjct: 1699 CKL--YGEAELGREAADKLFKMEPCSTAPYVAMASIYAQAG 1737
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 285/536 (53%), Gaps = 14/536 (2%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLC-----TNDLNIFSLKSKLVGVY 57
R +FP + + L L+ C LR + HA L + +++ KL+ Y
Sbjct: 5 RSLFPELPPAGHALLRLVDSCRAPAHLRSLRAAHARLLFLLRLPSHPASAAVRVKLIQAY 64
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC--NKFT 115
A C + +AR V D P+ N ++ ++A+ F+ MR + C + +T
Sbjct: 65 AACAALPAARAVLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYT 124
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+ + LK+C + G+Q+H+ ++G + +V V ++ I MY++CG A ++F M
Sbjct: 125 YPLALKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQ 184
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLF-ERMKLEGLEPNQFTYNAIIASY--ARRGDSNA 232
RDVVSW +MISG+ + A+ +F E + L+ +P+ T +I+ S AR D
Sbjct: 185 YRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIAL 244
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
F M +G L++WNAM++ + ++ EA++LF M GI+P+ VT+ VL
Sbjct: 245 LKGVFDEMRFKG----LISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLP 300
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
+ G ++ +G+ IH ++ R + + +AL+DMY+ CG LK+AR +F+ ++V S
Sbjct: 301 SCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVS 360
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
W ++I YG+HG +I+LFE+M +G+ + + +++L+ACSH GL++ G F SM
Sbjct: 361 WTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMT 420
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLA 472
+ + EHYAC+VD+L R+G + EAYD + +P+ + GA C IH D+
Sbjct: 421 SEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIG 480
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ + + ++ +V+LSNI A G W + +R +M+ K ++K PG S E
Sbjct: 481 LLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAE 536
>gi|297851320|ref|XP_002893541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339383|gb|EFH69800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 520
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 175/545 (32%), Positives = 281/545 (51%), Gaps = 66/545 (12%)
Query: 5 IFPINNLSV-------------NYLDCLLGKCMKSKALRQGKQVHALLCTN----DLNIF 47
IFP+N+ S Y+ L + + S A + G+++HA + DLNI
Sbjct: 13 IFPLNHYSTFPLKQNVSSLSPAKYIAGALQEHINSSAPKAGQKIHADIIKTGFIPDLNI- 71
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
KL+ ++ CG ++ AR VFD++P P + N+M+ G +E + +
Sbjct: 72 --SIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGFLKELLLLVQWISYS 129
Query: 108 IYRCNKFTFSIVLKACVGL-----LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
+ + +T S+VLKA L + + VHA + E D + AL+D Y K G
Sbjct: 130 GEKADGYTLSMVLKASNSLGSNMLMPRSLCRLVHARIIKCDVELDDVLITALVDAYVKSG 189
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
L SAR VF M + +VV TSMISGY N V++A +F K
Sbjct: 190 KLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK---------------- 233
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS-KRENEALKLFKGMLVSGIK 281
V D+V +NAM+ GF++S + ++ ++ M +
Sbjct: 234 -----------------------VKDIVVYNAMVEGFSRSAETAKRSVDMYISMQRASFH 270
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN T V+ A + ++G+++HA + + G++ + GS+L+DMY+KCG + DAR +
Sbjct: 271 PNISTFASVIGACSVLTCHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIDDARRV 330
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ + KNV SW +MI YGK+G + ++ELF RM E + N VT + VLSACSH GLV
Sbjct: 331 FDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFHIEPNYVTFLGVLSACSHSGLV 390
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
+KG EIF SM+ Y +K EHYAC+VD++ R+G + +A++ +R +P + + A +
Sbjct: 391 DKGYEIFESMQRDYSMKPKMEHYACMVDLMGRAGELNKAFEFVRAMPERHNSDVWAALLS 450
Query: 462 GCNIHGRRDLAVTMGEEFFEMGL-RKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
CN+HG DLA E F++ ++P ++ LSN+ A++ +W +R++MK + + K
Sbjct: 451 SCNLHGNVDLASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKVRRISK 510
Query: 521 QPGFS 525
G S
Sbjct: 511 NIGRS 515
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 189/568 (33%), Positives = 286/568 (50%), Gaps = 72/568 (12%)
Query: 29 LRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
LR GKQ+H L D F+ + L+ +YA G V+ ++ +F+ + + M++W M
Sbjct: 213 LRLGKQLHGYSLRVGDQKTFT-NNALMAMYAKLGRVDDSKALFESFVDRD--MVSWNTMI 269
Query: 88 SAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG-- 143
S+F+ + F EA+ +F LM + T + VL AC L + GK++HA +
Sbjct: 270 SSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDL 329
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF- 202
EN VG+AL+DMY C + S RRVF + R + W +MISGY ++A++LF
Sbjct: 330 IENSF-VGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFI 388
Query: 203 ERMKLEGLEPN-----------------------------------QFTYNAIIASYARR 227
E +K+ GL PN ++ NA++ Y+R
Sbjct: 389 EMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRM 448
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM------------ 275
G + + F M V D V+WN MI+G+ S R + AL L M
Sbjct: 449 GKMDISETIFDSME----VRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKD 504
Query: 276 -----LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
KPN +T+ VL +I G+EIHA R L D+ GSAL+DMY+
Sbjct: 505 DNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYA 564
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR-----ANE 385
KCG L +R +F KNV +WN +I G HG + ++ELF+ M+ E R NE
Sbjct: 565 KCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNE 624
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
VT I+V +ACSH GL+ +GL +F MK +GV+ + +HYACVVD+L R+G++ EAY+L+
Sbjct: 625 VTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVN 684
Query: 446 QVPMYVTNSMA-GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+P A + C IH +L + + +V+LSNI ++ G W+
Sbjct: 685 TMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWN 744
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+A +RK M++ V+K+PG S +E R+E
Sbjct: 745 KAMEVRKNMRQMGVKKEPGCSWIEFRDE 772
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 205/409 (50%), Gaps = 49/409 (11%)
Query: 72 KIPNPNVFMLNWM--VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
K +P+ +W+ + + + +F+EAI + M R + F F VLKA GL D+
Sbjct: 49 KPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDL 108
Query: 130 KKGKQVHAVATQMGF-ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
K G+Q+HA A + G+ + V+V N L++MY KCG + +VF + +RD VSW S I+
Sbjct: 109 KTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAA 168
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------------- 217
C K ++A+ F M++E +E + FT
Sbjct: 169 LCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGD 228
Query: 218 ------NAIIASYARRGDSNAAFAFFSRMTAEGFVP-DLVTWNAMISGFAQSKRENEALK 270
NA++A YA+ G + + A F E FV D+V+WN MIS F+QS R +EAL
Sbjct: 229 QKTFTNNALMAMYAKLGRVDDSKALF-----ESFVDRDMVSWNTMISSFSQSDRFSEALA 283
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID-VFTGSALIDMY 329
F+ M++ G++ + VT+ VL A + +G+EIHA V R I+ F GSAL+DMY
Sbjct: 284 FFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMY 343
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTL 388
C ++ R +F+ + + WNAMI Y ++G+ + ++ LF M++ G+ N T+
Sbjct: 344 CNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTM 403
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
SV+ AC H E + G K + ++DM R G+M
Sbjct: 404 ASVMPACVHCEAFSNK-ESIHGYAVKLGFKEDRYVQNALMDMYSRMGKM 451
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 140/554 (25%), Positives = 244/554 (44%), Gaps = 72/554 (12%)
Query: 29 LRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
L+ G+Q+HA + ++ + LV +Y CG + VFD+I + + N +
Sbjct: 108 LKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIA 167
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL---LDIKKGKQVHAVATQMG 143
A +++A+ F M+ + FT V AC L ++ GKQ+H + ++G
Sbjct: 168 ALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG 227
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
+ NAL+ MY+K G + ++ +F +RD+VSW +MIS + + EA+ F
Sbjct: 228 -DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFR 286
Query: 204 RMKLEGLEPNQFTYNAIIA--SYARRGD-SNAAFAFFSR---MTAEGFVPDLVT------ 251
M LEG+E + T +++ S+ R D A+ R + FV +
Sbjct: 287 LMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNC 346
Query: 252 --------------------WNAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVTGV 290
WNAMISG+A++ + +AL LF M+ V+G+ PN T+ V
Sbjct: 347 RQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASV 406
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
+ A + IH ++G D + +AL+DMYS+ G + + T+F+ +++
Sbjct: 407 MPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDR 466
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERM--LEEGM---------------RANEVTLISVLS 393
SWN MI Y G +++ L M +E + N +TL++VL
Sbjct: 467 VSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLP 526
Query: 394 ACSHGGLVEKGLEIFR-SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---M 449
C+ + KG EI +++ I+ + +VDM + G + + + ++P +
Sbjct: 527 GCAALAAIAKGKEIHAYAIRNMLASDITVG--SALVDMYAKCGCLNLSRRVFNEMPNKNV 584
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAV----TMGEEFFEMGLRKPD--GFVMLSNICAADGEW 503
N + A C +HG+ + A+ M E G KP+ F+ + C+ G
Sbjct: 585 ITWNVLIMA----CGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLI 640
Query: 504 HEAENLRKIMKEKN 517
E NL MK +
Sbjct: 641 SEGLNLFYRMKHDH 654
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 204/470 (43%), Gaps = 83/470 (17%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C + L GK++HA +L NDL N F + S LV +Y C V S R VFD I
Sbjct: 303 VLPACSHLERLDVGKEIHAYVLRNNDLIENSF-VGSALVDMYCNCRQVESGRRVFDHILG 361
Query: 76 PNVFMLNWMVMASAFTGNFQEA-IGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ + N M+ A G ++A I + +++ N T + V+ ACV +
Sbjct: 362 RRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKES 421
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H A ++GF+ D V NAL+DMYS+ G + + +F M RD VSW +MI+GY +
Sbjct: 422 IHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGR 481
Query: 195 VDEAVVLFERM-KLEG----------------LEPNQFTY-------------------- 217
A+VL M ++E +PN T
Sbjct: 482 YSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIH 541
Query: 218 ---------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
+A++ YA+ G N + F+ M + +++TWN +I
Sbjct: 542 AYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK----NVITWNVLIMACGMH 597
Query: 263 KRENEALKLFKGMLVSG-----IKPNNVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLH 316
+ EAL+LFK M+ KPN VT V A +G I G + + + G+
Sbjct: 598 GKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVE 657
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEI--TRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+ ++D+ + G L++A L V +W++++G H ++EL E
Sbjct: 658 PTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIH----QNVELGE 713
Query: 375 ------RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
LE + ++ V L ++ S+ GL K +E+ ++M++ GVK
Sbjct: 714 VAAKNLLHLEPNVASHYVLLSNIYSS---AGLWNKAMEVRKNMRQ-MGVK 759
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 148/333 (44%), Gaps = 52/333 (15%)
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------- 223
R SW + + EA+ + M + G P+ F + A++ +
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 224 -----------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
Y + G F R+T D V+WN+ I+
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDR----DQVSWNSFIAALC 170
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG---GLTGSIQIGREIHALVCRMGLHI 317
+ ++ +AL+ F+ M + ++ ++ T+ V A G+ +++G+++H R+G
Sbjct: 171 RFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQ- 229
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
FT +AL+ MY+K G + D++ LFE +++ SWN MI + + ++ F M+
Sbjct: 230 KTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMV 289
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC----- 432
EG+ + VT+ SVL ACSH ++ G EI + + + + +VDM C
Sbjct: 290 LEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQV 349
Query: 433 RSGRMVEAYDLLRQVPMYVTNSM-AGAFRNGCN 464
SGR V + L R++ ++ N+M +G RNG +
Sbjct: 350 ESGRRVFDHILGRRIELW--NAMISGYARNGLD 380
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 266/510 (52%), Gaps = 31/510 (6%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
++ LV ++A CG + AR VF+ + ++ M+ + G++ +A+ FS MR
Sbjct: 183 VQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEG 242
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ + + V+ AC +++ G +H A + G +D V NAL+DMY KCG L A
Sbjct: 243 FLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMAD 302
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA--- 225
RVF + +DVVSW+++I+GY K +V LF M GL+PN T +I+ S +
Sbjct: 303 RVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMK 362
Query: 226 -------------RRGDSNAAF---AFFSRMTAEG----------FVP--DLVTWNAMIS 257
R G + F AF + +G +P DLV WN+M++
Sbjct: 363 LFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVA 422
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
G+A + + AL F+ + G +P++VTV VL + G+E+HA V R +
Sbjct: 423 GYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSS 482
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
+ALIDMY KC L+ + +F++ ++ A++N +I +GKHG D +I LF+ M
Sbjct: 483 VCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMK 542
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
+G+ ++VT +++LS+CSH GL+EKGL + M + Y + KEHY+CVVD+ RSG++
Sbjct: 543 RDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKL 602
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
+A+ + + + G C +H R D+A + + FE P ++LSNI
Sbjct: 603 DDAWKFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIFEQNPSDPGYHILLSNIY 662
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
A G W +R +++ ++++ + G S +
Sbjct: 663 ANAGMWSHVTRIRTMIENRSLKNKTGNSLI 692
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/548 (27%), Positives = 257/548 (46%), Gaps = 50/548 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL + L + +++HA L + L ++LV YA G+ A V D +P
Sbjct: 45 LLLRLRSCPTLAEARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPMR 104
Query: 77 NVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK-- 133
N F N + +G F EA+ Y++++R+ + FT+ V+KAC L +++G+
Sbjct: 105 NSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMV 164
Query: 134 --QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
V A + V V AL+DM++KCG L AR VF M ERD+ +WT+MI G +
Sbjct: 165 RENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVH 224
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR------------------GD---- 229
+A+ LF RM+ EG + +I + R GD
Sbjct: 225 AGDWLDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCV 284
Query: 230 SNAAFAFFSRMTAEGFV---------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
SNA + + G D+V+W+ +I+G++Q+ +++ ++ LF M+ +G+
Sbjct: 285 SNALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGL 344
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
KPN+ T+ +L + + G+EIH R G F GSA ID YS+ GS+++A
Sbjct: 345 KPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEI 404
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+ E+ +++ WN+M+ Y +G DS++ F + + G R + VT++SVL C+H
Sbjct: 405 VLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSR 464
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS---GRMVEAYDLLRQVPMYVTNSMAG 457
+ +G E+ + Y + A ++DM C+ + E + L+ N++
Sbjct: 465 LIQGKELHAYVVRHYMSSVCSVSNA-LIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLIS 523
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKE 515
+F HG D A+ + + G+ PD FV L + C+ G + + IM +
Sbjct: 524 SFGK----HGHEDEAIMLFDLMKRDGI-APDKVTFVALLSSCSHAGLIEKGLHFYDIMLQ 578
Query: 516 KNVQKQPG 523
+ PG
Sbjct: 579 -DYNISPG 585
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 131/265 (49%), Gaps = 4/265 (1%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
N + +L + K R GK++H N D + F L S + Y+ G + A +V +
Sbjct: 349 NTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKF-LGSAFIDFYSRQGSIREAEIVLE 407
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+P ++ + N MV A GN A+ F +++ +R + T VL C + +
Sbjct: 408 LMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQ 467
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GK++HA + + SV NALIDMY KC L + +F + +RD ++ ++IS +
Sbjct: 468 GKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGK 527
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLV 250
DEA++LF+ MK +G+ P++ T+ A+++S + G F+ M + P
Sbjct: 528 HGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKE 587
Query: 251 TWNAMISGFAQSKRENEALKLFKGM 275
++ ++ +++S + ++A K +
Sbjct: 588 HYSCVVDLYSRSGKLDDAWKFVSSL 612
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 163/360 (45%), Gaps = 47/360 (13%)
Query: 19 LLGKCMKSKALRQGKQVH--ALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
++ C ++K LR G +H A+ C D S + LV +Y CG + A VF I
Sbjct: 253 VIPACGRAKELRTGMVLHGCAVRCGVGDDTCVS--NALVDMYCKCGCLGMADRVFWSIGF 310
Query: 76 PNVFMLNWMVMASAFTGNFQE--AIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+V ++W + + ++ N ++ ++ F+ M + N T + +L + + + GK
Sbjct: 311 KDV--VSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGK 368
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
++H + + GF+ +G+A ID YS+ G + A V M +RD+V W SM++GY
Sbjct: 369 EIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNG 428
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIA---SYAR--RGDSNAAFAFFSRMTAEGFVP- 247
D A+ F ++ G P+ T +++ ++R +G A+ M++ V
Sbjct: 429 NTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSN 488
Query: 248 -------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
D T+N +IS F + E+EA+ LF M GI P
Sbjct: 489 ALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAP 548
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG----SALIDMYSKCGSLKDA 338
+ VT +L + G I+ G + ++ + ++ G S ++D+YS+ G L DA
Sbjct: 549 DKVTFVALLSSCSHAGLIEKGLHFYDIMLQ---DYNISPGKEHYSCVVDLYSRSGKLDDA 605
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 169/515 (32%), Positives = 270/515 (52%), Gaps = 44/515 (8%)
Query: 25 KSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+ K+ + K++HA + + L+ S + +K+V + GD++ A +F+++ NPNVF+ N
Sbjct: 19 RVKSRNEWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPNVFLYNS 78
Query: 84 MVMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
++ A + + I Y L+R+ I ++FTF + K+C L GKQVH +
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVHGHLYKF 138
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G V NALIDMY K L A +VF M ERDV+SW S++SG
Sbjct: 139 GPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSG-------------- 184
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
YAR G A F M + +V+W AMISG+
Sbjct: 185 ---------------------YARLGQMKKAKGLFHLMIDK----TIVSWTAMISGYTGI 219
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
EA+ F+ M ++GI+P+ +++ VL + GS+++G+ IH R GL
Sbjct: 220 GCYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGSLELGKWIHMYAERRGLLKQTGVC 279
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+ALI+MYSKCG L A LFE T+ K+V SW+ MI Y HG + E F M ++
Sbjct: 280 NALIEMYSKCGMLSQAIQLFEQTKGKDVISWSTMISGYAYHGNAHRAFETFIEMQRAKVK 339
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
N +T + +LSACSH GL ++GL+ F M++ Y ++ EHY C++D+L R+G++ A +
Sbjct: 340 PNGITFLGLLSACSHVGLWQQGLKYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVE 399
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
+ + +P+ + + G+ + C G D+A+ + E+ +V+L+NI A G+
Sbjct: 400 ITKTMPVKPDSKIWGSLLSSCRTKGNLDVALVAMDHLVEVEPDDMGNYVLLANIYADLGK 459
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFV 534
W + LRKI++++N++K PG S +E N EFV
Sbjct: 460 WEDVSRLRKIIRKENMKKTPGCSLIEVNNIVQEFV 494
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 170/555 (30%), Positives = 267/555 (48%), Gaps = 84/555 (15%)
Query: 58 AGCGDVNSARLVFDKIPNPNVFML----NWMVMASAFTGNFQEAIGYF---SLMREFIY- 109
A C +++ K P N F + +V NF+EAI +RE I
Sbjct: 21 AICSSSTTSQPQLSKPPIHNTFFKSGAKDELVKRLCKDNNFKEAIDILCEQKRLREAIQI 80
Query: 110 -----RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
R + T+S +L+ C+ L + +G +VHA GF V + N ++DMY KC L
Sbjct: 81 LDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSL 140
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKV----------------------------- 195
+A+R+F M ERD+ SW MISGY ++
Sbjct: 141 VNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHD 200
Query: 196 --DEAVVLFERM-KLEGLEPNQFT-----------------------------------Y 217
+EA+ LF M + E + N+FT +
Sbjct: 201 QHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVW 260
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
+A+ Y + G A F + D+V+W AMI + + R E LF +L
Sbjct: 261 SALSDMYGKCGSIGEARHIFDKTVDR----DVVSWTAMIDRYFKEGRREEGFALFSDLLK 316
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
SGI PN T +GVL A + ++G+++H + R+G F S L+ MY+KCG++K+
Sbjct: 317 SGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKN 376
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
AR +F ++ SW ++I Y ++G D +++ FE +L+ G + + +T + VLSAC+H
Sbjct: 377 ARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTH 436
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
GLV+KGLE F S+KE++G+ + +HYAC++D+L RSGR+ EA D++ ++P+ +
Sbjct: 437 AGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWA 496
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
+ GC IHG LA E FE+ P + L+NI A G W +RK+M +
Sbjct: 497 SLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARG 556
Query: 518 VQKQPGFSRVEKRNE 532
V K+PG S +E + E
Sbjct: 557 VVKKPGLSWIEIKRE 571
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 208/439 (47%), Gaps = 48/439 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
+L +K +L K++ + DL +++ ++ YA G + AR +FD++ +
Sbjct: 130 ILDMYIKCNSLVNAKRLFDEMAERDLCSWNI---MISGYAKAGRLQEARKLFDQMTERDN 186
Query: 79 FMLNWMVMASAFTGNFQ--EAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
F +W M S + + Q EA+ F M R ++CNKFT S L A + + GK++
Sbjct: 187 F--SWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEI 244
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H ++G + D V +AL DMY KCG + AR +F +RDVVSWT+MI Y +
Sbjct: 245 HGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRR 304
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF---------- 245
+E LF + G+ PN+FT++ ++ + A MT GF
Sbjct: 305 EEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTL 364
Query: 246 ---------------------VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
PDLV+W ++ISG+AQ+ + +EAL+ F+ +L SG +P++
Sbjct: 365 VHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDH 424
Query: 285 VTVTGVLQAGGLTGSIQIGRE-IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+T GVL A G + G E ++ + GL + LID+ S+ G L++A + +
Sbjct: 425 ITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIID 484
Query: 344 ITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLE---EGMRANEVTLISVLSACSHGG 399
I+ + W +++G HG +++L +R E E N T ++ + + G
Sbjct: 485 KMPIEPDKFLWASLLGGCRIHG----NLKLAKRAAEALFEIEPENPATYTTLANIYATAG 540
Query: 400 LVEKGLEIFRSMKERYGVK 418
L E+ + M R VK
Sbjct: 541 LWGGVAEVRKVMDARGVVK 559
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 174/549 (31%), Positives = 282/549 (51%), Gaps = 58/549 (10%)
Query: 29 LRQGKQVHA----LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
L G+Q H + D ++ + L+ +Y C ++ AR +FD + N N +++W
Sbjct: 231 LEGGRQTHGYAYRIAVETDASVIN---ALIDLYCKCSRLSLARKLFDCMENRN--LVSWT 285
Query: 85 VMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
M + + N EA+ F + + ++ + F + +L +C L I +G+QVHA A +
Sbjct: 286 TMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKA 345
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
E+D V N+LIDMY+KC L AR VF + E D +S+ +MI GY + + A+ +F
Sbjct: 346 NLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVF 405
Query: 203 ERMKLEGLEPNQFTY-----------------------------------NAIIASYARR 227
+M+ L+P+ T+ +++I Y++
Sbjct: 406 SKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKF 465
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
A A F+ M D+V WNAMI G AQ+++ EA+KLF + VSG+ PN T
Sbjct: 466 SLVEDAKAVFNLMHNR----DMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTF 521
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
++ S+ G++ HA + + G D +ALIDMY+KCG +K+ R LFE T
Sbjct: 522 VALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLG 581
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
K+V WN+MI Y +HG + ++ +F M G+ N VT + VLSAC+H GLV++GL
Sbjct: 582 KDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRH 641
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
F MK +Y ++ EHYA VV++ RSG++ A + + ++P+ ++ + + C++ G
Sbjct: 642 FDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFG 701
Query: 468 RRDLAVTMGEEFFEMGLRKPDG----FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
V +G EM L V++SNI A+ G W +A+ LR+ M V K+PG
Sbjct: 702 N----VEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPG 757
Query: 524 FSRVEKRNE 532
+S +E E
Sbjct: 758 YSWIEVMKE 766
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 211/414 (50%), Gaps = 42/414 (10%)
Query: 20 LGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C +S+A+ G+QVH A+ D N++ + + L+ +YA G +++A LVFD +P N
Sbjct: 121 LRACAQSRAVSFGQQVHGVAVRIGLDGNVY-VGTALINLYAKVGCIDAAMLVFDALPVKN 179
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
++ + G A+ F M R ++F + + AC L ++ G+Q H
Sbjct: 180 PVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHG 239
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
A ++ E D SV NALID+Y KC L AR++F M R++VSWT+MI+GY S E
Sbjct: 240 YAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAE 299
Query: 198 AVVLFERMKLEGLEP-----------------------------------NQFTYNAIIA 222
A+ +F ++ EG +P +++ N++I
Sbjct: 300 AMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLID 359
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA+ A A F + + D +++NAMI G+++ A+ +F M +KP
Sbjct: 360 MYAKCEHLTEARAVFEALAED----DAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKP 415
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ +T +L +I++ ++IH L+ + G +D++ GS+LID+YSK ++DA+ +F
Sbjct: 416 SPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVF 475
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
+ +++ WNAMI ++ + +++LF ++ G+ NE T +++++ S
Sbjct: 476 NLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVAS 529
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 230/468 (49%), Gaps = 45/468 (9%)
Query: 32 GKQVHALL--------CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
G ++H LL T L L + L+ Y+ G V AR +FD++P+ N+
Sbjct: 23 GDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGS 82
Query: 84 MVMASAFTGNFQEAIGYFSLMREFI--YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
+ A G ++A+ F+ + N+F + L+AC + G+QVH VA +
Sbjct: 83 AISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVR 142
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
+G + +V VG ALI++Y+K G + +A VF + ++ V+WT++I+GY + + A+ L
Sbjct: 143 IGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALEL 202
Query: 202 FERMKLEGLEPNQFTYNAIIAS---------------YARR----GDSNAAFAFF----- 237
F +M L+G+ P++F + +++ YA R D++ A
Sbjct: 203 FGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCK 262
Query: 238 -SRMTAEGFVPD------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
SR++ + D LV+W MI+G+ Q+ + EA+ +F + G +P+ +
Sbjct: 263 CSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASI 322
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L + G +I GR++HA + L D + ++LIDMY+KC L +AR +FE +
Sbjct: 323 LNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDA 382
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
S+NAMI Y + G + +I++F +M ++ + +T +S+L S +E +I
Sbjct: 383 ISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQI-HG 441
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSM 455
+ + G + + ++D+ + + +A ++L+ M + N+M
Sbjct: 442 LIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAM 489
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 192/406 (47%), Gaps = 45/406 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C A+ QG+QVHA +L +K+ L+ +YA C + AR VF+ + +
Sbjct: 322 ILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDD 381
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
N M+ + G+ AI FS MR + + TF +L I+ KQ+H
Sbjct: 382 AISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHG 441
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ + G D+ G++LID+YSK L+ A+ VF+ M RD+V W +MI G + +E
Sbjct: 442 LIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEE 501
Query: 198 AVVLFERMKLEGLEPNQFTYNAII----------------ASYARRG---DSNAAFAFFS 238
AV LF ++++ GL PN+FT+ A++ A + G D + + A
Sbjct: 502 AVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALID 561
Query: 239 RMTAEGFV------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
GF+ D++ WN+MIS +AQ + EAL +F+ M +G++PN VT
Sbjct: 562 MYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVT 621
Query: 287 VTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
GVL A G + G R + + + +++++++ + G L A+ E
Sbjct: 622 FVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERM 681
Query: 346 RIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
I+ A+ W +++ S+ LF +E G A E+ L++
Sbjct: 682 PIEPAAAVWRSLL----------SACHLFGN-VEIGRYATEMALLA 716
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 136/272 (50%), Gaps = 21/272 (7%)
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
R + G P+ F N ++ +Y++ G A F RM + +LV+W + IS AQ
Sbjct: 36 RAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHK----NLVSWGSAISMHAQHG 91
Query: 264 RENEALKLFKGM--LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
E +A+ LF G PN + L+A + ++ G+++H + R+GL +V+
Sbjct: 92 CEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYV 151
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
G+ALI++Y+K G + A +F+ +KN +W A+I Y + G ++ELF +M +G+
Sbjct: 152 GTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGV 211
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV----VDMLCRSGRM 437
R + L S +SACS G +E G + Y +I+ E A V +D+ C+ R+
Sbjct: 212 RPDRFVLASAVSACSALGFLEGGRQ-----THGYAYRIAVETDASVINALIDLYCKCSRL 266
Query: 438 VEAYDLL-----RQVPMYVTNSMAGAFRNGCN 464
A L R + + T +AG +N C+
Sbjct: 267 SLARKLFDCMENRNLVSW-TTMIAGYMQNSCD 297
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 167/557 (29%), Positives = 283/557 (50%), Gaps = 75/557 (13%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL---NIFSLKSKLVGVYAGCGD----- 62
L L LL +C +K+L+ GK VH L L N F L + L+ +Y+ CGD
Sbjct: 48 LPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTF-LANHLINMYSKCGDYPSAY 106
Query: 63 --------------------------VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQE 96
+ AR +FDK+P +V N MV+A A +G +
Sbjct: 107 KVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCND 166
Query: 97 AIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALID 156
A+ ++ +R N+++F+ +L CV + +++ KQ H GF +++ + ++++D
Sbjct: 167 ALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLD 226
Query: 157 MYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT 216
Y+KC + ARR+F M RDV++WT+M+SG
Sbjct: 227 AYAKCSEMGDARRLFDEMIIRDVLAWTTMVSG---------------------------- 258
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
YA+ GD AA F M + + V W ++I+G+A+ ++AL+LF M+
Sbjct: 259 -------YAQWGDVEAARELFDLMPEK----NPVAWTSLIAGYARHDLGHKALELFTKMM 307
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
I+P+ T + L A S+ G++IH + R + + S+LIDMYSKCG L+
Sbjct: 308 ALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLE 367
Query: 337 DARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
R +F++ K +V WN +I +HG +I++F+ M+ GM+ + +TLI +L+AC
Sbjct: 368 VGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNAC 427
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH GLV++GL ++ S+ +GV ++EHYAC++D+L R+G + L ++P + +
Sbjct: 428 SHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPNDEI 487
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
A C +HG + + E+ E+ + +V+LS+I AA G W EN+R++M E
Sbjct: 488 WNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQLMNE 547
Query: 516 KNVQKQPGFSRVEKRNE 532
++V+K S +E N+
Sbjct: 548 RHVRKDRAISWIEIENK 564
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 199/420 (47%), Gaps = 27/420 (6%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN-DVSV 150
G +AI L+ R T + +L+ C +K GK VH G + + +
Sbjct: 29 GQLFQAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFL 88
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
N LI+MYSKCG SA +VF M R++ SW M+SGY + K+ A LF++M
Sbjct: 89 ANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMP---- 144
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
E + ++N ++ +YA+ G N A F+ + G + ++ +++ + K + +
Sbjct: 145 EKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQ 204
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMY 329
+LV+G N V + VL A + R + ++ R DV + ++ Y
Sbjct: 205 AHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIR-----DVLAWTTMVSGY 259
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
++ G ++ AR LF++ KN +W ++I Y +H + ++ELF +M+ +R ++ T
Sbjct: 260 AQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFS 319
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS-----GRMVEAYDLL 444
S L A + + G +I + R ++ + + ++DM + GR+V +DL+
Sbjct: 320 SCLCASASIASLNHGKQIHGYLI-RTNIRPNTIVVSSLIDMYSKCGCLEVGRLV--FDLM 376
Query: 445 -RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADG 501
+ + + N++ + HGR A+ M ++ +G+ KPD ++L N C+ G
Sbjct: 377 GDKWDVVLWNTIISSLAQ----HGRGQEAIQMFDDMVRLGM-KPDRITLIVLLNACSHSG 431
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 171/530 (32%), Positives = 291/530 (54%), Gaps = 9/530 (1%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
S+ L+ +C+ K++ ++ + + SL +KL+ Y CG V AR VFD
Sbjct: 77 SLQLYSSLIQQCIGIKSITDITKIQSHALKRGFH-HSLGNKLIDAYLKCGSVVYARKVFD 135
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
++P+ ++ N M+ + G +EAI + M ++FTFS V KA L + +
Sbjct: 136 EVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHE 195
Query: 132 GKQVHAVATQMGFE-NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
G++ H + +G ++V VG+AL+DMY+K G + AR V + +DVV +T++I GY
Sbjct: 196 GQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYS 255
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV 250
+ + E++ +F M +G+E N++T ++++ D + + G + V
Sbjct: 256 HHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAG-LESAV 314
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
TW ++I G Q+ RE AL F+ ML S I PN+ T++ VL+A ++ G++IHA+V
Sbjct: 315 TWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIV 374
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
+ GL ID + G+ALID Y KCGS + AR++F +V S N+MI Y ++G ++
Sbjct: 375 MKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEAL 434
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
+LF M + G+ N VT + VLSAC++ GL+E+G IF S + ++++K+HYAC+VD+
Sbjct: 435 QLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDL 494
Query: 431 LCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGF 490
L R+GR+ EA L+ QV + + + C IHG ++A + ++
Sbjct: 495 LGRAGRLKEAEMLINQVNISDV-VIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTH 553
Query: 491 VMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQN 540
V+LSN+ A+ G W + ++ M+E ++K P S V+ VE+E+
Sbjct: 554 VLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVD-----VEREIHT 598
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 274/555 (49%), Gaps = 75/555 (13%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFS 102
++ +L+ LV +Y C ++ AR +FDK+ + ++ W VM + G E++ F
Sbjct: 191 DLKNLQMALVDMYVKCREIEDARFLFDKMQERD--LVTWTVMIGGYAECGKANESLVLFE 248
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
MRE +K V+ AC L + K + + + F+ DV +G A+IDMY+KCG
Sbjct: 249 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 308
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----- 217
+ SAR +F M E++V+SW++MI+ Y + +A+ LF M G+ P++ T
Sbjct: 309 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 368
Query: 218 -------------------------NAIIA-------SYARRGDSNAAFAFFSRMTAEGF 245
N I+A SY R D A+ F M
Sbjct: 369 ACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDD--AYGLFDGMC---- 422
Query: 246 VPDLVTWNAMISGFAQ---------SKRE-------------------NEALKLFKGMLV 277
V D V+W+ M+ GFA+ + RE NE+L LF M
Sbjct: 423 VRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMRE 482
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G+ P+ V + V+ A G++ R I + R +DV G+A+IDM++KCG ++
Sbjct: 483 EGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVES 542
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
AR +F+ KNV SW+AMI YG HG +++LF ML G+ N++TL+S+L ACSH
Sbjct: 543 AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSH 602
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
GLVE+GL F M E Y V+ +HY CVVD+L R+GR+ EA L+ + + + G
Sbjct: 603 AGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWG 662
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
AF C H LA E+ + P +++LSNI A G W + R +M ++
Sbjct: 663 AFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRR 722
Query: 518 VQKQPGFSRVEKRNE 532
++K PG++ +E N+
Sbjct: 723 LKKIPGWTWIEVDNK 737
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 152/305 (49%), Gaps = 23/305 (7%)
Query: 106 EFIYRCN-KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
F+ R N KF S A V ++ + +QVHA A+ G ++ V N LI YS L
Sbjct: 74 HFLQRLNPKFYIS----ALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRAL 129
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYN------ 218
A +F GM RD VSW+ M+ G+ V F + G P+ +T
Sbjct: 130 DDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC 189
Query: 219 --------AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
A++ Y + + A F +M DLVTW MI G+A+ + NE+L
Sbjct: 190 RDLKNLQMALVDMYVKCREIEDARFLFDKMQER----DLVTWTVMIGGYAECGKANESLV 245
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
LF+ M G+ P+ V + V+ A G++ R I + R +DV G+A+IDMY+
Sbjct: 246 LFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYA 305
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
KCG ++ AR +F+ KNV SW+AMI YG HG +++LF ML GM +++TL S
Sbjct: 306 KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLAS 365
Query: 391 VLSAC 395
+L AC
Sbjct: 366 LLYAC 370
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 166/535 (31%), Positives = 265/535 (49%), Gaps = 54/535 (10%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVY 57
++R FP LL K A G ++H L + L +++ L+ +Y
Sbjct: 119 LDRFSFP----------SLLKAVSKVSAFNHGLEIHGL--ASKLGFVDDPFIQTGLIAMY 166
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
A C + ARL+FDK+ +P+ N ++ G++ +A+ F MR + +
Sbjct: 167 ASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILC 226
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
VL AC ++ G+ +H G+ D + ALI+MY+ CG + AR+++ G+ +
Sbjct: 227 TVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSK 286
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
++ T+M+SGY + V +A +F ++ +I
Sbjct: 287 HLIVSTAMLSGYAKLGMVKDA---------------RFIFDQMIER-------------- 317
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
DLV W+AMISG+A+S + EALKLF ML P+ +T+ V+ A
Sbjct: 318 ----------DLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHV 367
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
G++ IH V R G + +ALIDMY+KCG+L AR +FE KNV SW++MI
Sbjct: 368 GALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMI 427
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
+ HG DS+I+LF RM E + N VT I VL AC H GLVE+G ++F SM +G+
Sbjct: 428 NAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGI 487
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
++EHY C+VD+ CR+ + +A +L+ +P + G+ + C +HG +L +
Sbjct: 488 SPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAK 547
Query: 478 EFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
E+ V+LSNI A + W++ +RK M K + K+ SR+E N+
Sbjct: 548 RLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQ 602
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 171/371 (46%), Gaps = 46/371 (12%)
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
F D S+ S++ VS + + + G + F +IA YA A
Sbjct: 117 FALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDAR 176
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F +M PD V WN +I G+ Q+ ++AL+LF+ M S +KP++V + VL A
Sbjct: 177 LLFDKMCH----PDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSAC 232
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL------------------- 335
G G++ GR IH V G ID +ALI+MY+ CG++
Sbjct: 233 GHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVST 292
Query: 336 ------------KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
KDAR +F+ +++ W+AMI Y + +++LF+ ML++
Sbjct: 293 AMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVP 352
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
+++T++SV+SACSH G + + I + +R G + ++DM + G +V+A ++
Sbjct: 353 DQITMLSVISACSHVGALAQANWI-HTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREV 411
Query: 444 LRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNICA 498
+P + +SM AF +HG D A+ + E+ + +P+G F+ + C
Sbjct: 412 FENMPRKNVISWSSMINAFA----MHGNADSAIKLFRRMKEVNI-EPNGVTFIGVLYACG 466
Query: 499 ADGEWHEAENL 509
G E E L
Sbjct: 467 HAGLVEEGEKL 477
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 270/547 (49%), Gaps = 66/547 (12%)
Query: 52 KLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC 111
+L+ V GD N AR +FD IP P+ + ++ A G EAI +S ++E +
Sbjct: 17 RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP 76
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+ F KAC D + K+VH AT+ G +DV VGNALI Y KC + ARRVF
Sbjct: 77 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 136
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----R 226
+ RDVVSWTS+ S Y + + +F M G++PN T ++I+ + A +
Sbjct: 137 DDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 196
Query: 227 RGDSNAAFAFFSRMTAEGFV------------------------P--DLVTWNAMISGFA 260
G FA M FV P D+V+WN +++ +
Sbjct: 197 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 256
Query: 261 QSK-----------------------------------RENEALKLFKGMLVSGIKPNNV 285
++K R EA+++F+ M G KPN +
Sbjct: 257 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 316
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T++ +L A + ++++G+EIH V R D+ + +AL+ MY+KCG L +R +F++
Sbjct: 317 TISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM 376
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
R K+V +WN MI HG ++ LF++ML ++ N VT VLS CSH LVE+G+
Sbjct: 377 RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGV 436
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
+IF SM + V+ HY+CVVD+ R+GR+ EAY ++ +PM T S GA C +
Sbjct: 437 QIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRV 496
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
+ +LA ++ FE+ P +V L NI W EA +R +MKE+ + K PG S
Sbjct: 497 YKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCS 556
Query: 526 RVEKRNE 532
++ N+
Sbjct: 557 WLQVGNK 563
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 155/328 (47%), Gaps = 37/328 (11%)
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+G LI + G AR++F + + D + +++IS +EA+ ++ ++ G
Sbjct: 14 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 73
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
++P+ + A + A GD+ T G + D+ NA+I + + K A
Sbjct: 74 IKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGAR 133
Query: 270 KLFKGMLV-------------------------------SGIKPNNVTVTGVLQAGGLTG 298
++F ++V SG+KPN +TV+ +L A
Sbjct: 134 RVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELK 193
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++ G+EIH R G+ +++F SAL+ +Y+KC S+++AR +F++ ++V SWN ++
Sbjct: 194 DLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLT 253
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
Y K+ + LF +M +G+RA+E T +V+ C G E+ +E+FR M ++ G K
Sbjct: 254 AYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKM-QKMGFK 312
Query: 419 -----ISKEHYACVVDMLCRSGRMVEAY 441
IS AC R G+ + Y
Sbjct: 313 PNEITISSILPACSFSENLRMGKEIHCY 340
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 39/295 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + K L+ GK++H + + N+F + S LV +YA C V AR+VFD +P+
Sbjct: 185 ILPACAELKDLKSGKEIHGFAVRHGMVVNLF-VCSALVSLYAKCLSVREARMVFDLMPHR 243
Query: 77 NVFMLNWMVMA-----------SAF------------------------TGNFQEAIGYF 101
+V N ++ A S F G +EA+ F
Sbjct: 244 DVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMF 303
Query: 102 SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC 161
M++ ++ N+ T S +L AC +++ GK++H + D++ AL+ MY+KC
Sbjct: 304 RKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKC 363
Query: 162 GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII 221
G L +R VF M +DVV+W +MI EA+ LF++M L ++PN T+ ++
Sbjct: 364 GDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVL 423
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGM 275
+ + F+ M + V PD ++ ++ ++++ R NEA K +GM
Sbjct: 424 SGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGM 478
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 112/217 (51%), Gaps = 8/217 (3%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTN-DLNIFSLKSKLVGVYAG 59
M ++ F N ++++ +L C S+ LR GK++H + + + + + L+ +YA
Sbjct: 306 MQKMGFKPNEITIS---SILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAK 362
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
CGD+N +R VFD + +V N M++A+A GN +EA+ F M + N TF+ V
Sbjct: 363 CGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGV 422
Query: 120 LKACVGLLDIKKGKQV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FER 177
L C +++G Q+ +++ E D + + ++D+YS+ G L A + GM E
Sbjct: 423 LSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEP 482
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ 214
+W ++++ C V K E + + KL +EPN
Sbjct: 483 TASAWGALLAA-CRVYKNVELAKISAK-KLFEIEPNN 517
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/479 (33%), Positives = 251/479 (52%), Gaps = 41/479 (8%)
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
A+ F E+I + M + F+F +LK+C L G+Q+H T+ G E +
Sbjct: 29 AYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEP 88
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVS--WTSMISGYCNVSKVDEAVVLFERMK 206
V ALI MY KCGL+ AR+VF + +S + ++ISGY SKV +A +F RMK
Sbjct: 89 FVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMK 148
Query: 207 LEGLEPNQFT-----------------------------------YNAIIASYARRGDSN 231
G+ + T N+ I Y + G
Sbjct: 149 ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVE 208
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A F M +G L+TWNA+ISG++Q+ + L+L++ M SG+ P+ T+ VL
Sbjct: 209 AGRRLFDEMPVKG----LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVL 264
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
+ G+ +IG E+ LV G +VF +A I MY++CG+L AR +F+I +K++
Sbjct: 265 SSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV 324
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SW AMIGCYG HGM + + LF+ M++ G+R + + VLSACSH GL +KGLE+FR+M
Sbjct: 325 SWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM 384
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
K Y ++ EHY+C+VD+L R+GR+ EA + + +P+ ++ GA C IH D+
Sbjct: 385 KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDM 444
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
A + E +V++SNI + +R +M+E+ +K+PG+S VE +
Sbjct: 445 AELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHK 503
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 172/397 (43%), Gaps = 38/397 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C G+Q+H + + F L + L+ +Y CG V AR VF++ P
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVL-TALISMYCKCGLVADARKVFEENPQS 117
Query: 77 NVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ + + + S +T N + +A F M+E + T ++ C + G+
Sbjct: 118 SQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRS 177
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + G +++V+V N+ I MY KCG + + RR+F M + +++W ++ISGY
Sbjct: 178 LHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGL 237
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD------ 248
+ + L+E+MK G+ P+ FT ++++S A G + + GFVP+
Sbjct: 238 AYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNA 297
Query: 249 -------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
LV+W AMI + L LF M+ GI+P+
Sbjct: 298 SISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPD 357
Query: 284 NVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
VL A +G G E+ A+ L S L+D+ + G L +A
Sbjct: 358 GAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFI 417
Query: 343 EITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLE 378
E ++ + A W A++G H VD + F +++E
Sbjct: 418 ESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE 454
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
WN + A +E++ L++ ML SG P+ + +L++ G+++H
Sbjct: 19 TPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 78
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS--WNAMIGCYGKHGMVD 367
V + G + F +ALI MY KCG + DAR +FE + S +NA+I Y + V
Sbjct: 79 VTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE 406
+ +F RM E G+ + VT++ ++ C+ HG V+ GL+
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLD 188
>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/545 (31%), Positives = 284/545 (52%), Gaps = 46/545 (8%)
Query: 23 CMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C K LR K VH + + SL + L+ +Y+ CG + A+ +F+ I + +
Sbjct: 213 CGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSC- 271
Query: 82 NWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
W M SA+ N F+EA+ F M++ N T VL +C L +K+GK VH
Sbjct: 272 -WTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFV 330
Query: 140 TQ--MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ MG + +G ALID YS C + S ++ H + ++VSW ++IS Y DE
Sbjct: 331 LRNAMGVTG-LDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDE 389
Query: 198 AVVLFERMKLEGLEPN----------------------------------QFTYNAIIAS 223
A+ F M +G+ P+ +F N+++
Sbjct: 390 AMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEFVQNSLMDM 449
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
Y++ G +++A+ F+++ + +V WN MI GF+Q+ EAL LF M + ++ N
Sbjct: 450 YSKCGFASSAYTIFNKIKHK----SIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEIN 505
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
VT +QA G + G+ IH + G D++ +AL+DMY+KCG L+ A+ +F+
Sbjct: 506 KVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFD 565
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
K+V SW+ MI +G HG ++++ LF +M+ ++ NEVT +++LSAC H G V++
Sbjct: 566 SIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKE 625
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
G F +M++ YG+ + EH+A +VD+L R+G + AY++++ + V S+ GA NGC
Sbjct: 626 GKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGC 685
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
I+GR D+ + EE + + +LSNI A G W+E+ +R M+ ++K PG
Sbjct: 686 RIYGRMDMIEYIAEELGGISTDDTGYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPG 745
Query: 524 FSRVE 528
+S VE
Sbjct: 746 YSTVE 750
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 194/388 (50%), Gaps = 33/388 (8%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+ + LVG+Y + A+ VFD++ ++ + + ++ G ++E + F M
Sbjct: 139 IGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEG 198
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
R + V +AC + ++ K VH + G D S+ N+LI MYS+CG LC A+
Sbjct: 199 IRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAK 258
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR-- 226
R+F + +R WTSMIS Y +EA+ +F +M+ +EPN T +++ S AR
Sbjct: 259 RLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLG 318
Query: 227 ---RGDSNAAFAFFSRMTAEGFV---------------------------PDLVTWNAMI 256
G S F + M G ++V+WN +I
Sbjct: 319 RLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLI 378
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
S +A+ +EA+ F M+ GI P++ ++ + A +GSIQ G++IH V + G
Sbjct: 379 SFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGF- 437
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
D F ++L+DMYSKCG A T+F + K++ +WN MI + ++G+ ++ LF+ M
Sbjct: 438 FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEM 497
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKG 404
+ + N+VT +S + ACS+ G ++KG
Sbjct: 498 FKNRLEINKVTFLSAIQACSNLGYLDKG 525
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 182/394 (46%), Gaps = 38/394 (9%)
Query: 28 ALRQGKQVHALLCTNDLNIFSLKS-KLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
LR+ Q+HA L L+ L S KL+ Y+ G + S+RLVF P+P+ FM + ++
Sbjct: 13 TLRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIK 72
Query: 87 ASAFTGNFQEAIGYFS----LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
+ F+E + F+ + + C F + V++A G+ ++ G+++H +
Sbjct: 73 CHLWNHLFREVLSLFNHHIQMGSKLTQNC-AFLYPSVIRAVTGVGELIVGRKLHGRILKS 131
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
GF D +G +L+ MY + L A++VF M RD+V W+S+IS Y E + +F
Sbjct: 132 GFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMF 191
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD-------------- 248
M EG+ P+ ++ + + G A + + EG V D
Sbjct: 192 RSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQC 251
Query: 249 -----------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
W +MIS + Q++ EAL +F M S ++PN+VT+ VL
Sbjct: 252 GYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVL 311
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHID-VFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
+ G ++ G+ +H V R + + + G ALID YS C + L +N+
Sbjct: 312 NSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENI 371
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
SWN +I Y + G+ D ++ F M+ +G+ +
Sbjct: 372 VSWNTLISFYAREGLNDEAMAFFACMVAKGIMPD 405
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 177/391 (45%), Gaps = 47/391 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI--FSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + L++GK VH + N + + L L+ Y+ C ++S + I N
Sbjct: 310 VLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNE 369
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N+ N ++ A G EA+ +F+ M + F+ + + A I+ G+Q+H
Sbjct: 370 NIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIH 429
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ GF ++ V N+L+DMYSKCG SA +F+ + + +V+W MI G+
Sbjct: 430 GHVMKRGFFDEF-VQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISV 488
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
EA+ LF+ M LE N+ T+ A++
Sbjct: 489 EALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALV 548
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ GD A F + + +V+W+ MI+ + N A LF M++S IK
Sbjct: 549 DMYAKCGDLQTAQKVFDSIVEK----SVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIK 604
Query: 282 PNNVTVTGVLQAGGLTGSIQIGR-EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
PN VT +L A GS++ G+ + + G+ +V ++++D+ S+ G + A
Sbjct: 605 PNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYE 664
Query: 341 LFEITRIKNVAS-WNAMI-GC--YGKHGMVD 367
+ + R AS W A++ GC YG+ M++
Sbjct: 665 IIKSIRTPVAASIWGALLNGCRIYGRMDMIE 695
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 147/310 (47%), Gaps = 34/310 (10%)
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
+++ Q+HA N+ L++ YS+ G L S+R VF+ D ++ +I
Sbjct: 14 LRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKC 73
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQ---FTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
+ E + LF G + Q F Y ++I + G+ R+ GF
Sbjct: 74 HLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGF 133
Query: 246 -------------------------------VPDLVTWNAMISGFAQSKRENEALKLFKG 274
V DLV W+++IS + ++ E L++F+
Sbjct: 134 CEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRS 193
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M+ GI+P++V + V +A G G +++ + +H V R G+ D ++LI MYS+CG
Sbjct: 194 MICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGY 253
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
L A+ LFE ++ + W +MI Y ++ + ++++F +M + + N+VT+ISVL++
Sbjct: 254 LCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNS 313
Query: 395 CSHGGLVEKG 404
C+ G +++G
Sbjct: 314 CARLGRLKEG 323
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 143/327 (43%), Gaps = 36/327 (11%)
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGD-SNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
L + + L N ++ SY++ G ++ F++ + PD ++ +I
Sbjct: 20 LHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPS-----PDSFMFSVLIKCH 74
Query: 260 AQSKRENEALKLFKGMLVSGIKPNN---VTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+ E L LF + G K V++A G + +GR++H + + G
Sbjct: 75 LWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFC 134
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
D G++L+ MY + L+DA+ +F+ ++++ W+++I CY ++G+ +E+F M
Sbjct: 135 EDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSM 194
Query: 377 LEEGMRANEVTLISVLSACS-----------HGGLVEKGLEIFRSMKERYGVKISKEHYA 425
+ EG+R + V L+SV AC HG ++ +G+ S+ V S+ Y
Sbjct: 195 ICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGY- 253
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
LCR+ R+ E D R + SM A+ D+ + M + E
Sbjct: 254 -----LCRAKRLFECID-DRSTSCWT--SMISAYNQNECFEEALDVFIKMQDSEVE---- 301
Query: 486 KPDGFVMLS--NICAADGEWHEAENLR 510
P+ M+S N CA G E +++
Sbjct: 302 -PNDVTMISVLNSCARLGRLKEGKSVH 327
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 281/582 (48%), Gaps = 79/582 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYA--GCGDVNSARLVFDKIPN 75
LL C K L+ KQ+H+ + L N SKL+ A GD++ A +F I N
Sbjct: 34 LLSNC---KTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRN 90
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
PN + N M+ + + + A+ Y+ M N++TF + K+C + +GKQV
Sbjct: 91 PNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQV 150
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG---------------------- 173
HA ++G E++ V +LI+MY++ G L +AR VF
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210
Query: 174 -----MFE----RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT-------- 216
+F+ RDVVSW +MISGY +V+EA+ FE M+ + PN T
Sbjct: 211 DEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSAC 270
Query: 217 ----------------------------YNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
N +I Y + GD A F ++ + +
Sbjct: 271 AQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDK----N 326
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
+V+WN MI G+ EAL LF+ M+ S I PN+VT +L A G++ +G+ +HA
Sbjct: 327 VVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHA 386
Query: 309 LVCR--MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
V + + V ++LIDMY+KCG L A+ +F+ K++A+WNAMI + HG
Sbjct: 387 YVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHT 446
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
D+++ LF RM EG +++T + VL+AC H GL+ G F SM + Y V HY C
Sbjct: 447 DTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGC 506
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
++D+ R+G EA L++ + M ++ + C IH R +LA ++ + FE+
Sbjct: 507 MIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPEN 566
Query: 487 PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
P +V+LSNI A G W + +R + + ++K PG S +E
Sbjct: 567 PSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIE 608
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 190/426 (44%), Gaps = 30/426 (7%)
Query: 12 SVNYLDCLLGKCMKS-KALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARL 68
+V+ + +L C +S +L+ G V + + L NI L + L+ +Y CGD+ A
Sbjct: 259 NVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNI-RLVNGLIDMYVKCGDLEEASN 317
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
+F+KI + NV N M+ ++EA+G F M + N TF +L AC L
Sbjct: 318 LFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGA 377
Query: 129 IKKGKQVHAVATQ--MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
+ GK VHA + +N V++ +LIDMY+KCG L A+R+F M + + +W +MI
Sbjct: 378 LDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMI 437
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
SG+ D A+ LF RM EG P+ T+ ++ + G + +FS M + V
Sbjct: 438 SGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKV 497
Query: 247 -PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
P L + MI F ++ +EA L K M +KP+ +L A + I++
Sbjct: 498 SPKLPHYGCMIDLFGRAGLFDEAETLVKNM---EMKPDGAIWCSLLGACRIHRRIELAES 554
Query: 306 IHALVCRMGLHIDVFTGSALI---DMYSKCGSLKDA---RTLFEITRIKNVASWNAMIGC 359
V + ++ SA + ++Y+ G +D RT R+K V GC
Sbjct: 555 ----VAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVP------GC 604
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEV--TLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
VDS + F + ++NE+ L + G V E+ M E +
Sbjct: 605 SSIE--VDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKE 662
Query: 418 KISKEH 423
+ H
Sbjct: 663 GVLSHH 668
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 272/518 (52%), Gaps = 44/518 (8%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNF--QEAIGYFSLMREFI 108
+ L+ Y+ CG+V++AR VFD I + M++W M + + N+ ++++ F MR
Sbjct: 143 TALIDAYSVCGNVDAARQVFDGIYFKD--MVSWTGMVACYAENYCHEDSLLLFCQMRIMG 200
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
YR N FT S LK+C GL K GK VH A ++ ++ D+ VG AL+++Y+K G + A+
Sbjct: 201 YRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQ 260
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE-------------------- 208
+ F M + D++ W+ MIS Y K EA+ LF RM+
Sbjct: 261 QFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASL 320
Query: 209 ----------------GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
GL+ N F NA++ YA+ G+ + F+ T + + V W
Sbjct: 321 VLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEK----NEVAW 376
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N +I G+ Q +AL LF ML I+P VT + VL+A +++ GR+IH+L +
Sbjct: 377 NTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIK 436
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
+ D ++LIDMY+KCG + DAR F+ ++ SWNA+I Y HG+ ++ L
Sbjct: 437 TMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNL 496
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F+ M + + N++T + VLSACS+ GL++KG F+SM + YG++ EHY C+V +L
Sbjct: 497 FDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLG 556
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
RSG+ EA L+ ++P + + A C IH DL + EM + V+
Sbjct: 557 RSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVL 616
Query: 493 LSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
LSN+ A W +RK MK+K V+K+PG S VE +
Sbjct: 617 LSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQ 654
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 235/466 (50%), Gaps = 56/466 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L + ++++ GK +H + + L++F+ ++ L+ Y G + A +FD++P
Sbjct: 9 MLQQAIRNRDPNAGKSLHCHILKHGASLDLFA-QNILLNTYVHFGFLEDASKLFDEMPLT 67
Query: 77 NVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N ++++ +A F+ FQ A + Y N+F F+ +LK V +
Sbjct: 68 NT--VSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLS 125
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VHA ++G + D VG ALID YS CG + +AR+VF G++ +D+VSWT M++ Y
Sbjct: 126 VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYC 185
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------------- 223
+++++LF +M++ G PN FT +A + S
Sbjct: 186 HEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIA 245
Query: 224 ----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
Y + G+ A FF M + DL+ W+ MIS +AQS + EAL+LF M S
Sbjct: 246 LLELYTKSGEIAEAQQFFEEMPKD----DLIPWSLMISRYAQSDKSKEALELFCRMRQSS 301
Query: 280 -IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+ PNN T VLQA + +G +IH+ V ++GL +VF +AL+D+Y+KCG ++++
Sbjct: 302 VVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENS 361
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
LF + KN +WN +I Y + G + ++ LF ML ++ EVT SVL A +
Sbjct: 362 VKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASL 421
Query: 399 GLVEKGLEI----FRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+E G +I ++M + V + ++DM + GR+ +A
Sbjct: 422 VALEPGRQIHSLTIKTMYNKDSVVANS-----LIDMYAKCGRIDDA 462
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 157/315 (49%), Gaps = 8/315 (2%)
Query: 19 LLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C L G Q+H+ L D N+F + + L+ VYA CG++ ++ +F
Sbjct: 313 VLQACASLVLLNLGNQIHSCVLKVGLDSNVF-VSNALMDVYAKCGEIENSVKLFTGSTEK 371
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N N +++ G+ ++A+ FS M + + T+S VL+A L+ ++ G+Q+H
Sbjct: 372 NEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIH 431
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ + + D V N+LIDMY+KCG + AR F M ++D VSW ++I GY
Sbjct: 432 SLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGM 491
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAM 255
EA+ LF+ M+ +PN+ T+ ++++ + G + A F M + G P + + M
Sbjct: 492 EALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCM 551
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ +S + +EA+KL + +P+ + +L A + ++ +G+ V M
Sbjct: 552 VWLLGRSGQFDEAVKLIGEI---PFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEP 608
Query: 316 HIDVFTGSALIDMYS 330
D T L +MY+
Sbjct: 609 QDDA-THVLLSNMYA 622
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 185/568 (32%), Positives = 279/568 (49%), Gaps = 70/568 (12%)
Query: 29 LRQGKQVHALLCTN-DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
+R GKQVHA N DL ++ + LV +YA G VN A+ +F ++ N ++ +
Sbjct: 450 VRLGKQVHAYTLRNGDLRTYT-NNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISS 508
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG--FE 145
+ F+EA+ Y LM R + T + VL AC L ++ G+++H A + G E
Sbjct: 509 LSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIE 568
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
N VG AL+DMY C R VF G+ R V W ++++GY D+A+ LF M
Sbjct: 569 NSF-VGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEM 627
Query: 206 KLE------------------------------------GLEPNQFTYNAIIASYARRGD 229
E G +++ NA++ Y+R G
Sbjct: 628 ISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGR 687
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS----------- 278
+ F RM D+V+WN MI+G R ++AL L M
Sbjct: 688 VEISKTIFGRMNKR----DIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVD 743
Query: 279 -------GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
KPN+VT+ VL ++ G+EIHA + L +DV GSAL+DMY+K
Sbjct: 744 YEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAK 803
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG------MRANE 385
CG L A +F+ I+NV +WN +I YG HG + ++ELF M G +R NE
Sbjct: 804 CGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNE 863
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
VT I++ +ACSH G+V++GL +F +MK +GV+ +HYAC+VD+L RSGR+ EAY+L+
Sbjct: 864 VTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELIN 923
Query: 446 QVPMYVTNSMA-GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+P + A + C IH + + F + +V++SNI ++ G W
Sbjct: 924 TMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWD 983
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+A +RK MKE V+K+PG S +E +E
Sbjct: 984 QALGVRKKMKEMGVRKEPGCSWIEHGDE 1011
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 208/450 (46%), Gaps = 77/450 (17%)
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
++ + + +F++AI ++ M + F F VLKA + D+ GKQ+HA + G
Sbjct: 301 LLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFG 360
Query: 144 F--ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
+ V+V N+L++MY KCG L +AR+VF + +RD VSW SMI+ C + + ++ L
Sbjct: 361 HAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHL 420
Query: 202 FERMKLEGLEPNQFTY-----------------------------------NAIIASYAR 226
F M E ++P FT NA++ YAR
Sbjct: 421 FRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYTNNALVTMYAR 480
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G N A A F + DLV+WN +IS +Q+ R EAL M+V G++P+ VT
Sbjct: 481 LGRVNDAKALFGVFDGK----DLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVT 536
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHID-VFTGSALIDMYSKCGSLKDARTLFEIT 345
+ VL A ++IGREIH R G I+ F G+AL+DMY C K R +F+
Sbjct: 537 LASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGV 596
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACS-------- 396
+ VA WNA++ Y ++ D ++ LF M+ E N T SVL AC
Sbjct: 597 VRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDK 656
Query: 397 ---HGGLVEKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRM---VEAYDLLRQVP 448
HG +V++G K+ Y ++DM R GR+ + + +
Sbjct: 657 EGIHGYIVKRGF--------------GKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRD 702
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEE 478
+ N+M GC + GR D A+ + E
Sbjct: 703 IVSWNTMI----TGCIVCGRYDDALNLLHE 728
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 224/476 (47%), Gaps = 63/476 (13%)
Query: 32 GKQVHALLCT---NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
GKQ+HA + + ++ + LV +Y CGD+ +AR VFD IP+ + N M+
Sbjct: 349 GKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATL 408
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL-DIKKGKQVHAVATQMGFEND 147
++ ++ F LM FT V AC + ++ GKQVHA + G +
Sbjct: 409 CRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLR 467
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFE-RDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
NAL+ MY++ G + A+ +F G+F+ +D+VSW ++IS + +EA++ M
Sbjct: 468 TYTNNALVTMYARLGRVNDAKALF-GVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMI 526
Query: 207 LEGLEPNQFTYNAIIAS---------------YA-RRGD---------------SNAAFA 235
++G+ P+ T +++ + YA R GD N
Sbjct: 527 VDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQP 586
Query: 236 FFSRMTAEGFVPDLVT-WNAMISGFAQSKRENEALKLFKGMLV-SGIKPNNVTVTGVLQA 293
R+ +G V V WNA+++G+A+++ +++AL+LF M+ S PN T VL A
Sbjct: 587 KKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPA 646
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
IH + + G D + +AL+DMYS+ G ++ ++T+F +++ SW
Sbjct: 647 CVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSW 706
Query: 354 NAMI-GCYGKHGMVDSSIELFERML----EEG--------------MRANEVTLISVLSA 394
N MI GC G D ++ L M E+G + N VTL++VL
Sbjct: 707 NTMITGCI-VCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPG 765
Query: 395 CSHGGLVEKGLEIFR-SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
C+ + KG EI ++K++ + ++ + +VDM + G + A + Q+P+
Sbjct: 766 CAALAALGKGKEIHAYAVKQKLAMDVAVG--SALVDMYAKCGCLNLASRVFDQMPI 819
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 203/468 (43%), Gaps = 80/468 (17%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN-DL--NIFSLKSKLVGVYAGCGDVNSARLVFDK 72
L +L C + + LR G+++H N DL N F + + LV +Y C RLVFD
Sbjct: 537 LASVLPACSQLERLRIGREIHCYALRNGDLIENSF-VGTALVDMYCNCKQPKKGRLVFDG 595
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+ V + N ++ A +A+ F ++ E + N TF+ VL ACV
Sbjct: 596 VVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSD 655
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
+ +H + GF D V NAL+DMYS+ G + ++ +F M +RD+VSW +MI+G
Sbjct: 656 KEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIV 715
Query: 192 VSKVDEAVVLFERMKLE------------------GLEPNQFTY---------------- 217
+ D+A+ L M+ +PN T
Sbjct: 716 CGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKG 775
Query: 218 -------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
+A++ YA+ G N A F +M + +++TWN +I
Sbjct: 776 KEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMP----IRNVITWNVLIMA 831
Query: 259 FAQSKRENEALKLFKGMLVSG------IKPNNVTVTGVLQAGGLTGSIQIGREI-HALVC 311
+ + EAL+LF+ M G I+PN VT + A +G + G + H +
Sbjct: 832 YGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKA 891
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI--TRIKNVASWNAMIGCYGKHGMVD-- 367
G+ + L+D+ + G +K+A L + + V +W++++G H V+
Sbjct: 892 SHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFG 951
Query: 368 --SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
++ LF +LE + ++ V + ++ S+ GL ++ L + + MKE
Sbjct: 952 EIAAKHLF--VLEPNVASHYVLMSNIYSS---AGLWDQALGVRKKMKE 994
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
W ++ S +A+ + ML + P+N VL+A + +G++IHA V
Sbjct: 298 WIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVF 357
Query: 312 RMG--LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
+ G V ++L++MY KCG L AR +F+ ++ SWN+MI + + S
Sbjct: 358 KFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELS 417
Query: 370 IELFERMLEEGMRANEVTLISVLSACSH 397
+ LF ML E + TL+SV ACSH
Sbjct: 418 LHLFRLMLSENVDPTSFTLVSVAHACSH 445
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/484 (31%), Positives = 253/484 (52%), Gaps = 47/484 (9%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
+ S L G G + AR +FD+IP P++F N M+ + + A +F M
Sbjct: 38 TWNSMLAGYSNRRGKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQM--- 94
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
+K D + N +I +S+ G++ A
Sbjct: 95 --------------------PVK----------------DTASWNTMISGFSQNGMMDQA 118
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR 227
R +F M R+ VSW +MISGY +D A LFE + + + A+I + +
Sbjct: 119 RELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSV----VAWTAMITGFMKF 174
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
G A +F M + +LVTWNAMI+G+ ++ + LKLFK M+ SG +PN ++
Sbjct: 175 GKIELAEKYFEEMPMK----NLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSL 230
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
+ VL ++++G+++H L+C+ + ++ G++L+ MY KCG L+DA LF +
Sbjct: 231 SSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQ 290
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
K+V +WNAMI Y +HG + ++ LF++M +EGM+ + +T ++VLSAC+H G V+ G+E
Sbjct: 291 KDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEY 350
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
F SM YGV+ +HY CVVD+L R G++VEA DL++++P +++ G C IH
Sbjct: 351 FNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHK 410
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
+LA + + G+V L+N+ AA W +R+ MK+ V K PG+S +
Sbjct: 411 NLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWI 470
Query: 528 EKRN 531
E ++
Sbjct: 471 EVKS 474
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 182/360 (50%), Gaps = 28/360 (7%)
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN-VSKVDEAVVLFER 204
++V N +I + + G L SA RVF M + V+W SM++GY N K+ A LF+R
Sbjct: 3 SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDR 62
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
+ EP+ F+YN ++A Y D +A FF +M V D +WN MISGF+Q+
Sbjct: 63 IP----EPDIFSYNIMLACYLHNADVESARLFFDQMP----VKDTASWNTMISGFSQNGM 114
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
++A +LF M V N ++G +++G L + Q+ R V +A
Sbjct: 115 MDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQL---FEVAPVR-----SVVAWTA 166
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
+I + K G ++ A FE +KN+ +WNAMI Y ++ ++ ++LF+RM+E G R N
Sbjct: 167 MITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPN 226
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSM-KERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
+L SVL CS+ ++ G ++ + + K I+ ++ M C+ G + +A+ L
Sbjct: 227 PSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAG--TSLLSMYCKCGDLEDAWKL 284
Query: 444 LRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
+P + N+M + HG + A+ + ++ + G+ KPD ++ + A +
Sbjct: 285 FLVMPQKDVVTWNAMISGYAQ----HGAGEKALYLFDKMRDEGM-KPDWITFVAVLSACN 339
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 5/200 (2%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C AL+ GKQVH L+C + ++ + + L+ +Y CGD+ A +F +P
Sbjct: 230 LSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMP 289
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKG 132
+V N M+ A G ++A+ F MR+ + + TF VL AC G +D+
Sbjct: 290 QKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGI- 348
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+ +++ G E ++D+ + G L A + M + + + G C +
Sbjct: 349 EYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRI 408
Query: 193 SKVDEAVVLFERMKLEGLEP 212
K E + F L L+P
Sbjct: 409 HKNLE-LAEFAAKNLLNLDP 427
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/516 (33%), Positives = 266/516 (51%), Gaps = 39/516 (7%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
S +V Y V +AR VFD + + + N MV F EAI F M +
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIG 204
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ T + VL L D+ G + +A ++GF + V L +YSKCG + +AR +
Sbjct: 205 FDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLL 264
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM----------KLEGLEPNQFTY--- 217
F + + D+VS+ +MISGY ++ + +V LF+ + + GL P F +
Sbjct: 265 FGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHL 324
Query: 218 ----------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
A+ Y+R + +A F + + L +WNAM
Sbjct: 325 HLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEK----SLASWNAM 380
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
ISG+AQ+ +A+ LF+ M ++PN VTVT +L A G++ +G+ +H L+ R
Sbjct: 381 ISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESF 440
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
++F +ALIDMY+KCGS+ +A+ LF + KN +WNAMI YG HG ++ LF
Sbjct: 441 ESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNE 500
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
ML + VT +SVL ACSH GLV +G EIFRSM +G + EHYAC+VD+L R+G
Sbjct: 501 MLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAG 560
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
+ +A D +R++P+ + GA C IH +LA ++ FE+ + +V+LSN
Sbjct: 561 NLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSN 620
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
I +A + EA ++R ++K + + K PG + +E N
Sbjct: 621 IYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVAN 656
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 145/539 (26%), Positives = 253/539 (46%), Gaps = 52/539 (9%)
Query: 25 KSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+ L Q Q HA + N L N +KL + ++ A L+F IPNP++F+ N
Sbjct: 19 RVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNV 78
Query: 84 MVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
++ A + + A+ ++ +R+ + FT++ V+ L VA
Sbjct: 79 LIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVA--- 135
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
GF +D+ VG+A++ Y K + +AR+VF GM ERD V W +M+SG S DEA+++F
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195
Query: 203 ERMKLEGLEPNQFTYNAIIAS-----------------------------------YARR 227
M G+ + T A++ Y++
Sbjct: 196 GDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC 255
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
G+ A F ++ PDLV++NAMISG+ + +++LFK +LVSG K N+ ++
Sbjct: 256 GEIETARLLFGQIGQ----PDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSI 311
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
G++ G + + R IH + G+ + +AL +YS+ ++ AR LF+ +
Sbjct: 312 VGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSE 371
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
K++ASWNAMI Y ++G+ + +I LF+ M + +R N VT+ S+LSAC+ G + G +
Sbjct: 372 KSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLG-KW 430
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA-GAFRNGCNIH 466
+ R + + ++DM + G + EA L +P N++ A +G +H
Sbjct: 431 VHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPE--KNAVTWNAMISGYGLH 488
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENL-RKIMKEKNVQKQP 522
G A+ + E + P G LS + C+ G E + + R ++ + + P
Sbjct: 489 GYGHEALNLFNEMLHSRV-SPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLP 546
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/508 (32%), Positives = 268/508 (52%), Gaps = 47/508 (9%)
Query: 27 KALRQGKQVHALLCTNDLNIFS---LKSKLVGVYA--GCGDVNSARLVFDKIPNPNVFML 81
K L+ Q+HA T IFS + S+++ A G + AR +F +I P++F+
Sbjct: 46 KTLKDLTQIHAQTITT--GIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIA 103
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREF-IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVAT 140
N ++ A AF+ N +A+ ++S M E + + TF ++LKAC + ++ G+ +H+
Sbjct: 104 NTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVF 163
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
++G+ ++VSV N L+ MY+ CGL+ SA VF E D SW MI GY A
Sbjct: 164 KLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARR 223
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
+FE M P++ D+V+W+ MI+G+
Sbjct: 224 MFEAM------PDR---------------------------------DVVSWSVMINGYV 244
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q R E L LF+ M+ I+PN + L A G+++ G+ I + R + + V
Sbjct: 245 QESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVR 304
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
G+ALIDMYSKCGS++ A +F + KNV +W+AMI +G ++ LF +M +G
Sbjct: 305 LGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQG 364
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++ NEVT I +L+ACSH LV++G F SM YG+K + H+ C+VD+ R+G + +A
Sbjct: 365 VKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQA 424
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
+++ +P +++ GA N C IHG +L +G+ E+ +V+LSNI AA
Sbjct: 425 QTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAAC 484
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRVE 528
G W LR++M+E+ V K PG S ++
Sbjct: 485 GRWDRVAELRRMMRERQVSKTPGCSFID 512
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 170/502 (33%), Positives = 263/502 (52%), Gaps = 44/502 (8%)
Query: 29 LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
+ Q KQ+H L F L++ L+ VY G V A VF+K+P+P++ N M++
Sbjct: 79 ISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVG 138
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVAT--QMGFE 145
A G EA+ F M ++FT +L +C L ++K GK VH +
Sbjct: 139 YAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTIS 198
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+++ +GNAL+DMY KC + A R F + E+D+VSW
Sbjct: 199 SNLILGNALLDMYVKCQKVELALRTFGALKEKDIVSW----------------------- 235
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
N I+A A+ G+ A FF +M D+V+WN++++G+A
Sbjct: 236 ------------NMIVAGCAKVGELEQARLFFYQMPCR----DIVSWNSLVTGYACRGDF 279
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
+L M++ + P+ VT+ ++ A +G++ GR H V RM + +D F GSAL
Sbjct: 280 ASVKELIVDMVMEKVIPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSAL 339
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
IDMY KCGS++ A +F+ K+V W MI HG ++ELF M +E + ++
Sbjct: 340 IDMYCKCGSIERASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEM-QEDVSPDD 398
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
VT +SVLSACSH GLV++G+++F SM + YG++ EHY C+VD+L RSGR+ EA D++
Sbjct: 399 VTFVSVLSACSHSGLVDQGIKVFSSMTD-YGIEPGVEHYGCLVDLLARSGRLSEAKDIID 457
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
Q+PM + S+ GA N C G +LA E + + G+ +LSNI AA G W
Sbjct: 458 QMPMKPSRSIWGAMLNACQAQGDVELAEIASRELLNLDPEEEGGYTLLSNIYAASGRWSY 517
Query: 506 AENLRKIMKEKNVQKQPGFSRV 527
++ +R+ M+ + V+K G S V
Sbjct: 518 SKKIRETMESRGVKKTAGCSSV 539
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 7/184 (3%)
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+ A F+ T P+L +N +IS F+ S ++ E+ L+ +L SG P+ T+ +
Sbjct: 17 DLAITLFNHFTPN---PNLFIYNTLISAFS-SLKKIESFYLYNVLLSSGECPDKQTLLYL 72
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
LQA + ++IH GL + + LI +Y + G ++ A +FE ++
Sbjct: 73 LQAVNFISQV---KQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFEKMPSPDI 129
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
S+N MI Y K G ++ LF M+ G+ +E T++ +L +C G V+ G +
Sbjct: 130 VSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKAVHGW 189
Query: 411 MKER 414
M+ R
Sbjct: 190 MERR 193
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/561 (32%), Positives = 277/561 (49%), Gaps = 50/561 (8%)
Query: 6 FPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGC---GD 62
FP N S+ +L +C K L +QVHA L + + ++ V A
Sbjct: 19 FPENPKSL-----ILQQCKTPKDL---QQVHAHLLKTRRLLDPIITEAVLESAALLLPDT 70
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
++ A +F+ I P N M+ AF + A+ F M E + +KFTFS VLKA
Sbjct: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C + +++G+QVHA+ + GF+++ V N LI MY+ CG + AR VF GM ER +V+W
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190
Query: 183 TSMISGYCNVSKVDEAVVLFER---MKLE------------------------------- 208
SM+SGY DE V LF + +++E
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250
Query: 209 -GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
GL N ++I YA+ G + A F M D+V W+AMISG+AQ+ R E
Sbjct: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKR----DVVAWSAMISGYAQADRCKE 306
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
AL LF M + PN VT+ VL + + G+ + G+ +H + + + + V G+ LID
Sbjct: 307 ALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLID 366
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
Y+KCG + + +F+ KNV +W A+I +G ++E F MLE ++ N+VT
Sbjct: 367 FYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVT 426
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
I VLSACSH LV++G +F SM+ + ++ EHY C+VD+L R+G + EAY + +
Sbjct: 427 FIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNM 486
Query: 448 PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAE 507
P + C H ++A E + +++LSN A G +A
Sbjct: 487 PFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAI 546
Query: 508 NLRKIMKEKNVQKQPGFSRVE 528
+R ++KEK ++K PG S +E
Sbjct: 547 RVRSLIKEKEIKKIPGCSLIE 567
>gi|6729034|gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thaliana]
Length = 548
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/545 (33%), Positives = 289/545 (53%), Gaps = 43/545 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGD---VNSARLVFDKI 73
+L + ++L + Q+H L+ + + N+ L S+L+ C + ++ AR VF+ I
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPL-SRLIDFCTTCPETMNLSYARSVFESI 67
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P+V++ N M+ + + N +A+ ++ M Y + FTF VLKAC GL DI+ G
Sbjct: 68 DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGS 127
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH + GFE ++ V L+ MY CG + RVF + + +VV+W S+ISG+ N +
Sbjct: 128 CVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNN 187
Query: 194 KVDEAVVLFERMKLEGLEPNQFT---------------------YNAIIAS-----YARR 227
+ +A+ F M+ G++ N+ +N I+A+ YA+
Sbjct: 188 RFSDAIEAFREMQSNGVKANETIMVDLLVACGRCFDPYFQSKVGFNVILATSLIDMYAKC 247
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
GD A F M LV+WN++I+G++Q+ EAL +F ML GI P+ VT
Sbjct: 248 GDLRTARYLFDGMPER----TLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTF 303
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
V++A + G Q+G+ IHA V + G D AL++MY+K G + A+ FE
Sbjct: 304 LSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEK 363
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKGLE 406
K+ +W +I HG + ++ +F+RM E+G + +T + VL ACSH GLVE+G
Sbjct: 364 KDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQR 423
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F M++ +G++ + EHY C+VD+L R+GR EA L++ +P+ ++ GA NGC+IH
Sbjct: 424 YFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIH 483
Query: 467 GRRDLA---VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
+L +M E E+G +V+LSNI A G W + + +R+ MK K V K G
Sbjct: 484 ENLELTDRIRSMVAEPEELG---SGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLG 540
Query: 524 FSRVE 528
S VE
Sbjct: 541 HSSVE 545
>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g55740, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 830
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/519 (29%), Positives = 270/519 (52%), Gaps = 6/519 (1%)
Query: 20 LGKCMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
+ C+ + A + +GKQ HA+ N + + + L + L+ Y G + A +VFD++
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMF 336
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+V N ++ G ++AI LMR + + T + ++ A ++K GK+
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
V + FE+D+ + + ++DMY+KCG + A++VF E+D++ W ++++ Y
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGL 456
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
EA+ LF M+LEG+ PN T+N II S R G + A F +M + G +P+L++W
Sbjct: 457 SGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTT 516
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M++G Q+ EA+ + M SG++PN ++T L A S+ IGR IH + R
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL 576
Query: 315 LHIDVFT-GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
H + + ++L+DMY+KCG + A +F + NAMI Y +G + +I L+
Sbjct: 577 QHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALY 636
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
+ G++ + +T+ +VLSAC+H G + + +EIF + + +K EHY +VD+L
Sbjct: 637 RSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLAS 696
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G +A L+ ++P M + CN + +L + + E +V +
Sbjct: 697 AGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTI 756
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
SN A +G W E +R++MK K ++K+PG S ++ E
Sbjct: 757 SNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGE 795
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 232/465 (49%), Gaps = 39/465 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIP 74
+L C+ + L GKQ+HA + N + ++ +++KLV YA C + A ++F K+
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNG-DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLR 134
Query: 75 NPNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
NVF ++ G + A+ G+ ++ I+ N F V KAC L + G+
Sbjct: 135 VRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDN-FVVPNVCKACGALKWSRFGR 193
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH + G E+ V V ++L DMY KCG+L A +VF + +R+ V+W +++ GY
Sbjct: 194 GVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNG 253
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEG---- 244
K +EA+ LF M+ +G+EP + T + +++ A G + A A + M +
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGT 313
Query: 245 ----------------------FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
F D+VTWN +ISG+ Q +A+ + + M + +K
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY 373
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ VT+ ++ A T ++++G+E+ R D+ S ++DMY+KCGS+ DA+ +F
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ T K++ WN ++ Y + G+ ++ LF M EG+ N +T ++ + G V+
Sbjct: 434 DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVD 493
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
+ ++F M+ G+ + + +++ + ++G EA LR++
Sbjct: 494 EAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 193/408 (47%), Gaps = 45/408 (11%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG--FENDVS 149
G +EA+ + M R + +L+ CV D+ GKQ+HA + G + +
Sbjct: 49 GEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEY 108
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+ L+ Y+KC L A +F + R+V SW ++I C + + A++ F M
Sbjct: 109 IETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENE 168
Query: 210 LEPNQFTYNAIIAS-----YARRGDSNAAF---------AFFSRMTAEGF---------- 245
+ P+ F + + ++R G + F + A+ +
Sbjct: 169 IFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDAS 228
Query: 246 -----VPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
+PD V WNA++ G+ Q+ + EA++LF M G++P VTV+ L A G
Sbjct: 229 KVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMG 288
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++ G++ HA+ G+ +D G++L++ Y K G ++ A +F+ K+V +WN +I
Sbjct: 289 GVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIIS 348
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
Y + G+V+ +I + + M E ++ + VTL +++SA + ++ G E+ + Y ++
Sbjct: 349 GYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV-----QCYCIR 403
Query: 419 ISKEH----YACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
S E + V+DM + G +V+A +D + + + N++ A+
Sbjct: 404 HSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAY 451
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
P ++ +S ++ EAL L M ++ +LQ + G++I
Sbjct: 33 PSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQI 92
Query: 307 HALVCRMG--LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHG 364
HA + + G + + + L+ Y+KC +L+ A LF R++NV SW A+IG + G
Sbjct: 93 HARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIG 152
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE----IFR 409
+ + ++ F MLE + + + +V AC HG +V+ GLE +
Sbjct: 153 LCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVAS 212
Query: 410 SMKERYG 416
S+ + YG
Sbjct: 213 SLADMYG 219
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 260/483 (53%), Gaps = 21/483 (4%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N+ S + L G Y G + AR +FD++P NV N M+ +EA F M
Sbjct: 234 NVISWVTLLNG-YCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEM 292
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
N +++ ++ GL K ++ + +M F N V+ AL+ Y + +
Sbjct: 293 PI----KNSISWTTIIS---GLARAGKLQEAKDLLDKMSF-NCVAAKTALMHGYLQRNMA 344
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ--FTYNAIIA 222
ARR+F GM D V W +MISGY ++EA++LF+RM PN+ ++N +IA
Sbjct: 345 DDARRIFDGMEVHDTVCWNTMISGYVQCGILEEAMLLFQRM------PNKDMVSWNTMIA 398
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA+ G + A F RM + V+WN++ISGF Q+ R +AL F M +
Sbjct: 399 GYAQDGQMHKAIGIFRRMNRR----NTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRA 454
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ T L+A + +GR++H L+ R G D F G+ALI Y+KCG + +A+ +F
Sbjct: 455 DWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIF 514
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ K++ SWNA+I Y +G +I +F M G+R +EVT + +LSACSH GL++
Sbjct: 515 DEMVYKDIVSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLID 574
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+GL F SM + Y +K EHYAC+VD+L R+G++ EA++L++ + + + GA
Sbjct: 575 EGLFFFYSMTKEYLLKPVAEHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGA 634
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C++H +LA E E+ RK +V+LSNI A G+W E+E R +KEK V K P
Sbjct: 635 CHMHKNHELAQLAAERLSELEPRKASNYVLLSNISAEAGKWDESEKARASIKEKGVNKPP 694
Query: 523 GFS 525
G +
Sbjct: 695 GLA 697
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 150/306 (49%), Gaps = 26/306 (8%)
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
M N V+ NA++ ++ G + AR +F GM R+ VSW +MI+ + +V +A L
Sbjct: 44 MPLRNTVTY-NAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSL 102
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
F+RM + ++F++ +++ YAR GD A RM + +NAMISG+A+
Sbjct: 103 FDRMPVR----DEFSWTVMVSCYARGGDLELARDVLDRMPGDKCT---ACYNAMISGYAK 155
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
+ R ++A+KL + M + N + G+ Q+G + ++Q E+ D+ +
Sbjct: 156 NGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFDEMVK---------DMTS 206
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
+ ++ + + G L A + F NV SW ++ Y + G + + +LF+RM E
Sbjct: 207 WNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMPER-- 264
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
N V +L H +E+ ++F M + + + ++ L R+G++ EA
Sbjct: 265 --NVVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSIS-----WTTIISGLARAGKLQEAK 317
Query: 442 DLLRQV 447
DLL ++
Sbjct: 318 DLLDKM 323
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 158/344 (45%), Gaps = 34/344 (9%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPN-VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC 111
+V YA GD+ AR V D++P N M+ A G F +A+ L+RE +
Sbjct: 117 MVSCYARGGDLELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAM---KLLRE-MPAP 172
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+ +++ A GL + G+ V AV D++ N ++ + + G L +A F
Sbjct: 173 DLVSWN---SALAGL--TQSGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTGDLNAASSFF 227
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
+ +V+SW ++++GYC ++ +A LF+RM E N +N ++ Y
Sbjct: 228 AKIESPNVISWVTLLNGYCRAGRIADARDLFDRMP----ERNVVAWNVMLDGYVHLSPIE 283
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A F M + + ++W +ISG A++ + EA L M + + + G L
Sbjct: 284 EACKLFDEMP----IKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYL 339
Query: 292 QAGGLTGSIQI--GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
Q + +I G E+H VC + +I Y +CG L++A LF+ K+
Sbjct: 340 QRNMADDARRIFDGMEVHDTVC----------WNTMISGYVQCGILEEAMLLFQRMPNKD 389
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
+ SWN MI Y + G + +I +F RM R N V+ SV+S
Sbjct: 390 MVSWNTMIAGYAQDGQMHKAIGIFRRM----NRRNTVSWNSVIS 429
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 146/340 (42%), Gaps = 71/340 (20%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSA 66
PI N S+++ + G K L++ K LL N + K+ L+ Y + A
Sbjct: 293 PIKN-SISWTTIISGLARAGK-LQEAKD---LLDKMSFNCVAAKTALMHGYLQRNMADDA 347
Query: 67 RLVFD-------------------------------KIPNPNVFMLNWMVMASAFTGNFQ 95
R +FD ++PN ++ N M+ A G
Sbjct: 348 RRIFDGMEVHDTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMH 407
Query: 96 EAIG-------------------------------YFSLMREFIYRCNKFTFSIVLKACV 124
+AIG +F LMR R + T++ L+AC
Sbjct: 408 KAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACA 467
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
L + G+Q+H + + G ND GNALI Y+KCG + A+++F M +D+VSW +
Sbjct: 468 NLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNA 527
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEG 244
+I GY + + EA+ +F M+ G+ P++ T+ I+++ + G + FF MT E
Sbjct: 528 LIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEY 587
Query: 245 FV-PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ P + M+ ++ + NEA +L +GM I+PN
Sbjct: 588 LLKPVAEHYACMVDLLGRAGKLNEAFELVQGM---QIQPN 624
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
+ T +A++ ++ G + +AR LF+ +N SWNAMI HG V + LF+RM
Sbjct: 48 NTVTYNAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLFDRMP 107
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
+E + ++S + GG LE+ R + +R Y ++ ++GR
Sbjct: 108 VR----DEFSWTVMVSCYARGG----DLELARDVLDRMPGDKCTACYNAMISGYAKNGRF 159
Query: 438 VEAYDLLRQVP 448
+A LLR++P
Sbjct: 160 DDAMKLLREMP 170
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/517 (30%), Positives = 276/517 (53%), Gaps = 40/517 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
++ YA CG++ A +F + + N M+ GNF+ A+ + M+ + + +
Sbjct: 40 IISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVD 99
Query: 113 KFTFSIVLK--ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
++F +LK ACVG +++ G+QVH++ +MG+E +V G+AL+DMY+KC + A V
Sbjct: 100 GYSFGSILKGVACVGYVEV--GQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEV 157
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------- 217
F + R+ V+W ++ISGY V A L + M+LEG+E + T+
Sbjct: 158 FKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLH 217
Query: 218 ----------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
NAII +Y+ G A F E D V+WN++
Sbjct: 218 KLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG-AIETRDLDHVSWNSI 276
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
++GF+QS +ALK F+ M + ++ + VL++ ++Q+G+++H LV + G
Sbjct: 277 LTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGF 336
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+ F S+LI MYSKCG ++DAR F+ T + +WN++I Y +HG +++LF
Sbjct: 337 EPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFL 396
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M + ++ + +T ++VL+ACSH GLVE+G +SM+ YG+ EHYAC++D+L R+G
Sbjct: 397 MKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAG 456
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
R+ EA L+ +P + C G +LA + E+ + +V+LS+
Sbjct: 457 RLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSS 516
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ W+E +++++MKE+ V+K PG+S +E +NE
Sbjct: 517 MFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNE 553
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 34/306 (11%)
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H +A + G + N +I Y+KCG + A ++F +RD VSW +MI+G+ N+
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF---------- 245
+ A+ + MK G + +++ +I+ A G S M G+
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141
Query: 246 ---------------------VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+ + VTWNA+ISG+AQ A L M + G++ ++
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE- 343
T +L ++ ++HA + + GL D +A+I YS+CGS++DA +F+
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261
Query: 344 --ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
TR + SWN+++ + + G+ + +++ FE M + + + +VL +CS +
Sbjct: 262 AIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATL 321
Query: 402 EKGLEI 407
+ G ++
Sbjct: 322 QLGQQV 327
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 283/540 (52%), Gaps = 46/540 (8%)
Query: 32 GKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G Q HAL +N ++F + S L+ +Y G + AR VFD IP N ++W + S
Sbjct: 132 GLQAHALAIKTSNFYDVF-VGSSLINMYCKIGCMLDARKVFDTIPERNT--VSWATIISG 188
Query: 90 FTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ EA F LMR +KF ++ VL A + GKQ+H +A + G +
Sbjct: 189 YAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSI 248
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
SVGNAL+ MY KCG L A + F ++D ++W++MI+GY EA+ LF M L
Sbjct: 249 ASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHL 308
Query: 208 EGLEPNQFTYNAIIAS---------------YARRGDSNAAFAFFSRM------------ 240
G +P++FT+ +I + Y+ + F + +
Sbjct: 309 NGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVD 368
Query: 241 TAEGF----VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
+GF PD+V W +MISG+AQ+ AL L+ M + I P+ +T+ VL+A
Sbjct: 369 ARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSS 428
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+++ G++IHA + G ++V GSAL MY+KCGSL+D +F +++ +WNAM
Sbjct: 429 LAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAM 488
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I ++G ++ELFE + + + VT ++VLSACSH GLVE+G FR M + +G
Sbjct: 489 ISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFG 548
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVP----MYVTNSMAGAFRNGCNIHGRRDLA 472
+ EHYAC+VD+L R+G++ E + + M + + GA RN N +L
Sbjct: 549 IVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNY----ELG 604
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
GE+ E+G ++ +++LS+I A G + E +R++MK + V K+PG S +E +++
Sbjct: 605 AYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQ 664
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 270/541 (49%), Gaps = 57/541 (10%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAG 59
MN + P + S ++D LL +C + K L++GK +HA LL T + L + LV +YA
Sbjct: 1 MNLYLLPPQHRS--FVDLLL-RCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAK 57
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFS 117
CG + A+LVF+ I N +V N ++ + G + + F MR N TFS
Sbjct: 58 CGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFS 117
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
V A + G Q HA+A + DV VG++LI+MY K G + AR+VF + ER
Sbjct: 118 GVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPER 177
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------- 217
+ VSW ++ISGY EA LF M+ E ++F Y
Sbjct: 178 NTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIH 237
Query: 218 ---------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
NA++ Y + G + A F ++ + D +TW+AMI+G+AQ+
Sbjct: 238 CLALKNGLLSIASVGNALVTMYGKCGCLDDALKTF-ELSGD---KDDITWSAMITGYAQA 293
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
+EAL LF M ++G KP+ T GV+ A G+++ G++IH + G ++
Sbjct: 294 GDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFM 353
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+AL+DMY+KCGSL DAR F+ + ++ W +MI Y ++G ++++ L+ RM E +
Sbjct: 354 TALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIM 413
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
+E+T+ SVL ACS +E+G +I + +YG + + + M + G + +
Sbjct: 414 PHELTMASVLRACSSLAALEQGKQI-HAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNL 472
Query: 443 LLRQVP---MYVTNSM-AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+ R++P + N+M +G +NG + A+ + EE G KPD +V N+ +
Sbjct: 473 VFRRMPSRDIMTWNAMISGLSQNGEGLK-----ALELFEE-LRHGTTKPD-YVTFVNVLS 525
Query: 499 A 499
A
Sbjct: 526 A 526
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 8/164 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C AL QGKQ+HA ++ + S L +YA CG + LVF ++P+ +
Sbjct: 422 VLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRD 481
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK-QVH 136
+ N M+ + G +A+ F +R + + TF VL AC + +++GK
Sbjct: 482 IMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFR 541
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARR------VFHGM 174
+ + G V ++D+ S+ G L + + HGM
Sbjct: 542 MMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGM 585
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 170/554 (30%), Positives = 284/554 (51%), Gaps = 43/554 (7%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLN-----IFSLKSKLVGVYAGCG 61
P S + LL C K + L +QVHA + L +F S+ +
Sbjct: 23 PFRLHSAASITTLLKACKKREHL---EQVHACIIHRGLEQDHFLVFLFISR---AHTLLS 76
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLK 121
++ A VF ++ P+ + N ++ + F + F+ M+ + FT+ V+K
Sbjct: 77 TLSYASSVFHRVLAPSTVLWNTLIKSHCQKNLFSHTLSAFARMKAHGALPDSFTYPSVIK 136
Query: 122 ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS 181
AC G ++GK +H A + G + D+ VG +LIDMY KCG + AR+VF GM +R+VVS
Sbjct: 137 ACSGTCKAREGKSLHGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVS 196
Query: 182 WTSMISGYCNVSKVDEAVVLFERMK----------LEGL-----------------EPNQ 214
WT+M+ GY V V EA LF+ M L+G E N
Sbjct: 197 WTAMLVGYVAVGDVVEARKLFDEMPHRNVASWNSMLQGFVKMGDLSGARGVFDAMPEKNV 256
Query: 215 FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
++ +I YA+ GD AA F + D+V W+A+ISG+ Q+ N+AL++F
Sbjct: 257 VSFTTMIDGYAKAGDMAAARFLFDCSLEK----DVVAWSALISGYVQNGLPNQALRVFLE 312
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV-FTGSALIDMYSKCG 333
M + +KP+ + ++ A G +++ + + + V ++ + + +AL+DM +KCG
Sbjct: 313 MELMNVKPDEFILVSLMSASAQLGHLELAQWVDSYVSKICIDLQQDHVIAALLDMNAKCG 372
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
+++ A LF+ ++V + +MI HG + ++ LF RML EG+ +EV +L+
Sbjct: 373 NMERALKLFDEKPRRDVVLYCSMIQGLSIHGRGEEAVNLFNRMLMEGLTPDEVAFTVILT 432
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
ACS GLV++G F+SMK++Y + +HYAC+VD+L RSG + +AY+L++ +P
Sbjct: 433 ACSRAGLVDEGRNYFQSMKQKYCISPLPDHYACMVDLLSRSGHIRDAYELIKLIPWEPHA 492
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIM 513
GA C ++G +L + FE+ +V+LS+I AA W + +R M
Sbjct: 493 GAWGALLGACKLYGDSELGEIVANRLFELEPLNAANYVLLSDIYAAAERWIDVSLVRSKM 552
Query: 514 KEKNVQKQPGFSRV 527
+E+ V+K PG S++
Sbjct: 553 RERRVRKIPGSSKI 566
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/477 (34%), Positives = 249/477 (52%), Gaps = 42/477 (8%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
GD+N A VFDKIP+P+ ++ N + + I +S M NKFT+ ++
Sbjct: 68 GDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLI 127
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
+AC I++GKQ+HA + GF D N LI MY L ARRVF M +RDVV
Sbjct: 128 RACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVV 187
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
SWTS+I+GY VD+A +FE M E N
Sbjct: 188 SWTSLITGYSQWGFVDKAREVFELMP----ERNS-------------------------- 217
Query: 241 TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI 300
V+WNAMI+ + QS R +EA LF M + + + +L A G++
Sbjct: 218 ---------VSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGAL 268
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY 360
+ G+ IH + + G+ +D + +IDMY KCG L+ A +F K ++SWN MIG
Sbjct: 269 EQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGL 328
Query: 361 GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKIS 420
HG +++IELF+ M E + + +T ++VLSAC+H GLVE+G F+ M E G+K
Sbjct: 329 AMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPG 388
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF 480
EH+ C+VD+L R+G + EA L+ ++P+ + GA C IHG +L +G++
Sbjct: 389 MEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVI 448
Query: 481 EMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR---NEFV 534
E+ +V+L+N+ A+ G W + +RK+M ++ V+K PGFS +E +EF+
Sbjct: 449 ELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFI 505
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 155/333 (46%), Gaps = 16/333 (4%)
Query: 6 FPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNS 65
F +NNL Y++ ++L Q ++V + D + S S + G Y+ G V+
Sbjct: 156 FSLNNLIHMYVNF--------QSLEQARRVFDNMPQRD--VVSWTSLITG-YSQWGFVDK 204
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
AR VF+ +P N N M+ A + EA F MR +KF + +L AC G
Sbjct: 205 AREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTG 264
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
L +++GK +H + G E D + +IDMY KCG L A VF+ + ++ + SW M
Sbjct: 265 LGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCM 324
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT-AEG 244
I G K + A+ LF+ M+ E + P+ T+ ++++ A G +F MT G
Sbjct: 325 IGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLG 384
Query: 245 FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
P + + M+ ++ EA KL M V+ P+ + ++ A + G+ ++G
Sbjct: 385 LKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVN---PDAGVLGALVGACRIHGNTELGE 441
Query: 305 EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
+I V + H + L ++Y+ G +D
Sbjct: 442 QIGKKVIELEPH-NSGRYVLLANLYASAGRWED 473
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/579 (29%), Positives = 286/579 (49%), Gaps = 70/579 (12%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ C R GKQ+HA L+ ++ + L SKL+ Y+ G + A VF KIP N
Sbjct: 9 LIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKN 68
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLM---REFIYRCNKFTFSIVLKACVGLL-DIKKGK 133
+F N + ++ + + FS + + ++FT + LKA L + K
Sbjct: 69 IFSWNALFISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAK 128
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+VH+ + G E D+ V NALI YS+C L AR +F M ERD VSW +M++GY
Sbjct: 129 EVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGG 188
Query: 194 KVDEAVVLFERMKLEGLE--PNQFT----------------------------------- 216
+E LF R+ L +E PN T
Sbjct: 189 SYEECKELF-RVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSL 247
Query: 217 YNAIIASYARRGDSNAAFAFFSRMT---------------AEGFV------------PDL 249
+NA+I YA+ G + A F M GFV P L
Sbjct: 248 WNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQERPRL 307
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
TWNA+ISG Q+ R+ A+ +F+ M G +PN VT+ +L +++ G+EIH
Sbjct: 308 PTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGY 367
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
R +++ +A+ID Y+KCG L A+ +F+ + +++ +W ++I Y HG + +
Sbjct: 368 AIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVA 427
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+ LF ML G++ ++VT SVL+AC+H G +++ +IF + YG++ EHYAC+V
Sbjct: 428 LSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVG 487
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
+L R+G++ +A + + ++P+ T + GA NG ++ G +L + + FE+
Sbjct: 488 VLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGN 547
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+V+++N+ + G W +A+ +R +MKE ++K PG S +E
Sbjct: 548 YVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIE 586
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 205/479 (42%), Gaps = 88/479 (18%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
N + +++ C L + GKQ+HA D +G+ LI YSK G + A VF
Sbjct: 2 NYSAYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVF 61
Query: 172 HGMFERDVVSWTSMISGY------CNVSKVDEAVV-----------------------LF 202
+ +++ SW ++ Y ++ K+ ++V LF
Sbjct: 62 GKIPRKNIFSWNALFISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLF 121
Query: 203 ERMKL----------EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
L GLE + F NA+I Y+R + A F RM D V+W
Sbjct: 122 SNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPER----DTVSW 177
Query: 253 NAMISGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
NAM++G++Q E +LF+ ML S +KPN +T VLQA + + G E+H V
Sbjct: 178 NAMLAGYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVN 237
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
+ +DV +A+I +Y+KCG L AR LFE K+ ++ +MI Y HG V+ +++
Sbjct: 238 ESQIKMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMD 297
Query: 372 LF---ER----------------------------MLEEGMRANEVTLISVLSACSHGGL 400
LF ER M G R N VTL S+L SH
Sbjct: 298 LFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFST 357
Query: 401 VEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMA 456
++ G EI +++ Y I ++D + G + A +D ++ + S+
Sbjct: 358 LKGGKEIHGYAIRNTYDRNIYVA--TAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSII 415
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRKIM 513
A+ +HG ++A+++ E G+ +PD S + CA GE EA + ++
Sbjct: 416 SAYA----VHGDANVALSLFYEMLTNGI-QPDQVTFTSVLAACAHSGELDEAWKIFNVL 469
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/551 (32%), Positives = 276/551 (50%), Gaps = 50/551 (9%)
Query: 26 SKALRQGKQVHALLCTNDLNIFSLKS---------KLVGVYAGCGDVNSARLVFDKIPNP 76
S L+ Q+ ++ T L+ LKS LV Y+ CG + AR VFD+IP+
Sbjct: 139 SILLKTASQLRDIVLTTKLHCNILKSNAADSFVLTSLVDAYSKCGKLRDARKVFDEIPDR 198
Query: 77 NVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+V ++W M A+ N +E + F+ MRE N FT ++ AC L + +GK
Sbjct: 199 SV--VSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKW 256
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER------DVVSWTSMISG 188
VH + G E + + +L++MY KCG + AR VF D+V WT+MI G
Sbjct: 257 VHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVG 316
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR------------------RGDS 230
Y A+ LF K + PN T +++++ A+ D+
Sbjct: 317 YTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLDDT 376
Query: 231 NAAFAFFSRMTAEGFVP------------DLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+ + G +P D+V+WN++ISG+AQS EAL LF M +
Sbjct: 377 SLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRME 436
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL-HIDVFTGSALIDMYSKCGSLKD 337
P+ VTV GVL A G+ QIG +H + GL ++ G+AL++ Y+KCG
Sbjct: 437 SFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATS 496
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
AR +F+ KN +W AMIG G G S+ LF ML+E + NEV ++L+ACSH
Sbjct: 497 ARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSH 556
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
G+VE+GL IF M + S +HYAC+VD+L R+G + EA D + ++P+ + G
Sbjct: 557 SGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVFG 616
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
AF +GC +H D E+ + +V++SN+ A+DG W + +R+++K++
Sbjct: 617 AFLHGCGLHSNFDFGEVAIRRMLELHPDQACYYVLISNLYASDGRWGMVKEVREMIKQRG 676
Query: 518 VQKQPGFSRVE 528
+ K PG S VE
Sbjct: 677 LNKVPGVSLVE 687
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 192/406 (47%), Gaps = 43/406 (10%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ L+ +YA G + AR +F ++P+P ++ + +++L R +
Sbjct: 72 TTLISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVVSFYNLARTTLGS 131
Query: 111 CNKF-TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
N FSI+LK L DI ++H + D V +L+D YSKCG L AR+
Sbjct: 132 FNDLVVFSILLKTASQLRDIVLTTKLHCNILKSN-AADSFVLTSLVDAYSKCGKLRDARK 190
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR-- 227
VF + +R VVSWTSMI Y +E ++LF RM+ L+ N FT +++ + +
Sbjct: 191 VFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGC 250
Query: 228 ------------------------------------GDSNAAFAFFSRMTAEGFVPDLVT 251
GD+ + F FS T G DLV
Sbjct: 251 LHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGG-GDDLVF 309
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
W AMI G+ Q AL+LF I PN+VT+ +L A +I +G+ +H LV
Sbjct: 310 WTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVV 369
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
+ GL D ++L+DMY+KCG + DA +F T K+V SWN++I Y + G +++
Sbjct: 370 KYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALD 428
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
LF RM E + VT++ VLSAC+ G + GL + +YG+
Sbjct: 429 LFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSL-HGFALKYGL 473
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 184/405 (45%), Gaps = 50/405 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ C K L QGK VH + N + I S L + L+ +Y CGD+ AR VFD+
Sbjct: 241 LVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVST 300
Query: 78 V----FMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
++ W M +T G Q A+ F+ + + N T + +L AC L +I
Sbjct: 301 CGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVM 360
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GK +H + + G + D S+ N+L+DMY+KCGL+ A VF ++DVVSW S+ISGY
Sbjct: 361 GKLLHVLVVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQ 419
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS---------------------------- 223
EA+ LF RM++E P+ T ++++
Sbjct: 420 SGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIY 479
Query: 224 --------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
YA+ GD+ +A F M + + VTW AMI G +L LF+ M
Sbjct: 480 VGTALLNFYAKCGDATSARMVFDGMGEK----NAVTWAAMIGGCGMQGDGVGSLALFRDM 535
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR-MGLHIDVFTGSALIDMYSKCGS 334
L + PN V T +L A +G ++ G I +C+ + + + ++D+ ++ G+
Sbjct: 536 LKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGN 595
Query: 335 LKDARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLE 378
L++A + ++ V + A + G H D RMLE
Sbjct: 596 LQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLE 640
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 134/291 (46%), Gaps = 5/291 (1%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
L LL C + + + GK +H L+ L+ SL++ LV +YA CG + A VF +
Sbjct: 345 LASLLSACAQLENIVMGKLLHVLVVKYGLDDTSLRNSLVDMYAKCGLIPDAHYVFATTVD 404
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V N ++ A +G+ EA+ F+ MR + + T VL AC + + G +
Sbjct: 405 KDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSL 464
Query: 136 HAVATQMGF-ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H A + G + + VG AL++ Y+KCG SAR VF GM E++ V+W +MI G
Sbjct: 465 HGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGD 524
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWN 253
++ LF M E L PN+ + ++A+ + G F M E FVP + +
Sbjct: 525 GVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYA 584
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
M+ A++ EAL M ++P L GL + G
Sbjct: 585 CMVDLLARAGNLQEALDFIDKM---PVQPGVGVFGAFLHGCGLHSNFDFGE 632
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 291/578 (50%), Gaps = 72/578 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYA--GCGDVNSARLVFDKIP 74
L+ +C ++K L KQ+HA + L + FS S+L+ A ++ A+ VFD+IP
Sbjct: 41 LIDQCSETKQL---KQIHAQMLRTGLFFDPFS-ASRLITAAALSPFPSLDYAQQVFDQIP 96
Query: 75 NPNVFMLNWMVMASAFTGN-FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+PN++ N ++ A A + N Q + + ++ + +KFTF ++KA L ++ GK
Sbjct: 97 HPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGK 156
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
H + ++ +DV + N+LI Y+KCG L RVF + RDVVSW SMI+ +
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGG 216
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------SN 231
+EA+ LF+ M+ + ++PN T ++++ A++ D SN
Sbjct: 217 CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSN 276
Query: 232 AAFAFFS---------RMTAEGFVPDLVTW------------------------------ 252
A ++ R+ + D+V+W
Sbjct: 277 AMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAA 336
Query: 253 -NAMISGFAQSKRENEALKLFKGMLVSGI-KPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
NA+IS + Q + EAL+LF + +S KP+ VT+ L A G++ +G IH +
Sbjct: 337 WNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYI 396
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
+ G+ ++ ++LIDMY KCG L+ A +F K+V W+AMI HG +I
Sbjct: 397 KKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAI 456
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
LF +M E+ ++ N VT ++L ACSH GLVE+G F M+ YGV +HYAC+VD+
Sbjct: 457 ALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDI 516
Query: 431 LCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGF 490
L R+G + EA +L+ ++PM S+ GA C IH LA + E+ +
Sbjct: 517 LGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAY 576
Query: 491 VMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
V+LSNI A G+W LRK+M++ ++K+PG S +E
Sbjct: 577 VLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIE 614
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 175/597 (29%), Positives = 295/597 (49%), Gaps = 94/597 (15%)
Query: 29 LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+ Q+H D I + +++ ++ +Y CG ++ A+ VF + PNP++F N M+
Sbjct: 130 LKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYG 189
Query: 88 SAFTGNFQEAIGYFSLMRE-------------------------FI------YRCNKFTF 116
+ G+ ++A+ F+ M E F+ +R N T+
Sbjct: 190 YSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTY 249
Query: 117 SIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE 176
+ VL AC + D++ G +HA +M DV G LIDMY+KCG L SAR+VF G+ E
Sbjct: 250 ASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTE 309
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------- 217
+ VSWTS+I G +EA+VLF +M+ + +QFT
Sbjct: 310 HNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQL 369
Query: 218 ----------------NAIIASYARRGD---SNAAF------------AFFSRMTAEGFV 246
NA++ YA+ GD +N AF A + + G V
Sbjct: 370 HAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDV 429
Query: 247 P------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
++++WN+M++ + Q E LK++ ML G+K + +T + + A
Sbjct: 430 EKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISAC 489
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
+ +G +I A ++G +V ++++ MYS+CG +++A+ +F +KN+ SWN
Sbjct: 490 ADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWN 549
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
AM+ Y ++G IE+FE+ML G ++++ +SVLS CSH G V +G F SM +
Sbjct: 550 AMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKD 609
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVT 474
+G+ EH+ C+VD+L R+G++ +A +L+ Q+P ++ GA C IHG LA
Sbjct: 610 HGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAEL 669
Query: 475 MGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+ E+ P + +L+NI + G+ N+RK+M++K V+K PG S +E N
Sbjct: 670 AVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDN 726
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 208/475 (43%), Gaps = 61/475 (12%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+ +C +++ +++HA L L +IF L++ L+ +Y+ CG ++ A VF I PN
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIF-LQNHLLNMYSNCGLISDAYRVFGGIMFPN 69
Query: 78 VFMLNWMVMASAFTGNFQEA------------IGYFSLMREFIYRCNKFTFSIVLKACVG 125
V+ N M+ A +G +EA + + S+M + + +KA
Sbjct: 70 VYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGE---LEATIKASGS 126
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
L +K Q+H A + F D V +++DMY KCG + A++VF + W SM
Sbjct: 127 LGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSM 186
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
I GY V +A+ LF +M E + ++N +I+ ++ G F M +GF
Sbjct: 187 IYGYSKYGSVKKALELFAKMP----ERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGF 242
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
+PN++T VL A ++ G
Sbjct: 243 -----------------------------------RPNSMTYASVLSACTSIYDLEWGAH 267
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+HA + RM +DV+ G LIDMY+KCG L+ AR +F+ N SW ++IG + G
Sbjct: 268 LHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGF 327
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
+ ++ LF +M E + +++ TL +VL C + G ++ R G+ S
Sbjct: 328 QEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITR-GLDSSVPVAN 386
Query: 426 CVVDMLCRSG---RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
+V M + G + A++L+ + +M AF ++ R+ M E
Sbjct: 387 ALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPE 441
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 172/372 (46%), Gaps = 45/372 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGC-------------- 60
L +LG C+ K + G+Q+HA T L+ + + LV +YA C
Sbjct: 350 LATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMP 409
Query: 61 -----------------GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIG-YFS 102
GDV AR FDK+P NV N M+ G ++E + Y
Sbjct: 410 IRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQ 469
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
++RE + + + TFS + AC L + G Q+ A A ++GF ++VSV N+++ MYS+CG
Sbjct: 470 MLREGV-KTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCG 528
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
+ A+++F + +++VSW +M++GY + + + +FE+M G P+Q +Y ++++
Sbjct: 529 QIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLS 588
Query: 223 SYARRG-DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ G S + F S G P + M+ ++ + +A L M K
Sbjct: 589 GCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQM---PFK 645
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA---LIDMYSKCGSLKDA 338
PN +L A + G+ ++ L + L +D + L ++YS+ G ++
Sbjct: 646 PNAAIWGALLAACRIHGNTKLAE----LAVKNLLELDAEGPGSYCLLANIYSESGKIQGV 701
Query: 339 RTLFEITRIKNV 350
+ ++ R K V
Sbjct: 702 TNVRKLMRDKGV 713
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 258/509 (50%), Gaps = 38/509 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + K L+ GK +H + + ++F + + LV +YA C V A+ VFD +P+
Sbjct: 349 ILPACSQLKDLKSGKTIHGFAVKHGMVEDVF-VCTALVNLYANCLCVREAQTVFDLMPHR 407
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV N + G Q+ + F M + + T +L AC L D+K GK +H
Sbjct: 408 NVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIH 467
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + G DV V NAL+ +Y+KC + A+ VF + R+V SW
Sbjct: 468 GFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASW-------------- 513
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
N I+ +Y + FS+M + D +TW+ +I
Sbjct: 514 ---------------------NGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVI 552
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
G ++ R EA+++F+ M G KP+ T+ +L+A L+ +++G+EIH V R
Sbjct: 553 GGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKD 612
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
D+ +AL+DMY+KCG L +R +F++ IK+V SWN MI G HG ++ LFE+M
Sbjct: 613 WDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKM 672
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
L ++ + T VLSACSH LVE+G++IF SM + V+ EHY CVVD+ R+G
Sbjct: 673 LLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGC 732
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
+ EAY ++++PM T AF GC ++ +LA ++ FE+ +V L NI
Sbjct: 733 LEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNI 792
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFS 525
W EA +RK+MKE+ + K PG S
Sbjct: 793 LVTAKLWSEASKIRKLMKERGITKTPGCS 821
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 224/461 (48%), Gaps = 40/461 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + L+ GK++H + + + ++F + S V YA C V A+ VFD +P+
Sbjct: 147 ILPGCSDLQDLKSGKEIHGFVVRHGMVEDVF-VSSAFVNFYAKCLCVREAQTVFDLMPHR 205
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V N + G Q+ + F M + + T S +L AC L D+K GK +H
Sbjct: 206 DVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIH 265
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + G +V V NAL+++Y C + A+ VF M R+V++W S+ S Y N
Sbjct: 266 GFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQ 325
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFV----- 246
+ + +F M L G++P+ ++I+ + + + G + FA M + FV
Sbjct: 326 KGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALV 385
Query: 247 -------------------P--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
P ++VTWN++ S + + L +F+ M+++G+KP+ V
Sbjct: 386 NLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLV 445
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T+ +L A ++ G+ IH R G+ DVF +AL+ +Y+KC +++A+ +F++
Sbjct: 446 TMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLI 505
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
+ VASWN ++ Y + + + +F +M + ++A+E+T V+ C +E+ +
Sbjct: 506 PHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAM 565
Query: 406 EIFRSMKERYGVKISKEHY-----ACVVDMLCRSGRMVEAY 441
EIFR M + G K + AC + R G+ + Y
Sbjct: 566 EIFRKM-QTMGFKPDETTIYSILRACSLSECLRMGKEIHCY 605
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 197/407 (48%), Gaps = 34/407 (8%)
Query: 23 CMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
C S+ + KQ H A C ++ S+ + + Y C V AR VFD + +V
Sbjct: 50 CAASRDALKVKQFHDDATRC-GVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVT 108
Query: 81 LNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVAT 140
N + G Q+ + F M + N T S +L C L D+K GK++H
Sbjct: 109 WNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVV 168
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ G DV V +A ++ Y+KC + A+ VF M RDVV+W S+ S Y N + +
Sbjct: 169 RHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLN 228
Query: 201 LFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFVP-------- 247
+F M L+G++P+ T + I+++ + + G + FA M FV
Sbjct: 229 VFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYE 288
Query: 248 ------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+++TWN++ S + + L +F+ M ++G+KP+ + ++
Sbjct: 289 SCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSS 348
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
+L A ++ G+ IH + G+ DVF +AL+++Y+ C +++A+T+F++ +N
Sbjct: 349 ILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRN 408
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
V +WN++ CY G + +F M+ G++ + VT++S+L ACS
Sbjct: 409 VVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACS 455
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 210/444 (47%), Gaps = 60/444 (13%)
Query: 95 QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNAL 154
EAI ++ R + +K F V KAC D K KQ H AT+ G +DVS+GNA
Sbjct: 22 NEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAF 81
Query: 155 IDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ 214
I Y KC + ARRVF + RDVV+W S+ + Y N + + +F +M L ++ N
Sbjct: 82 IHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANP 141
Query: 215 FTYNAIIASYARRGD----------------------SNAAFAFFSR-------MTAEGF 245
T ++I+ + D S+A F+++ T
Sbjct: 142 LTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDL 201
Query: 246 VP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
+P D+VTWN++ S + + L +F+ M++ G+KP+ VTV+ +L A ++ G
Sbjct: 202 MPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSG 261
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
+ IH + G+ +VF +AL+++Y C +++A+ +F++ +NV +WN++ CY
Sbjct: 262 KAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNC 321
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKIS--- 420
G + +F M G++ + + + S+L ACS L+ +S K +G +
Sbjct: 322 GFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQ-------LKDLKSGKTIHGFAVKHGM 374
Query: 421 -KEHYACV------VDMLC-RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLA 472
++ + C + LC R + V +DL+ + NS++ + N C ++ L
Sbjct: 375 VEDVFVCTALVNLYANCLCVREAQTV--FDLMPHRNVVTWNSLSSCYVN-CGF-PQKGLN 430
Query: 473 VTMGEEFFEMGLR--KPDGFVMLS 494
V F EM L KPD MLS
Sbjct: 431 V-----FREMVLNGVKPDLVTMLS 449
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 276/541 (51%), Gaps = 41/541 (7%)
Query: 29 LRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L GKQ+H ++ + L+ + S+ + L+ +Y G V+ AR VF ++ ++ N M+
Sbjct: 922 LELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISG 981
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD-IKKGKQVHAVATQMGFEN 146
A +G + ++G F + ++FT + VL+AC L Q+HA A + G
Sbjct: 982 CALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVL 1041
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D V LID+YSK G + A +F D+ SW +M+ GY +A+ L+ M+
Sbjct: 1042 DSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQ 1101
Query: 207 LEGLEPNQ-----------------------------------FTYNAIIASYARRGDSN 231
G NQ F + ++ Y + G+
Sbjct: 1102 ESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEME 1161
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
+A F+ + + PD V W MISG ++ +E AL + M +S ++P+ T ++
Sbjct: 1162 SARRIFNEIPS----PDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLV 1217
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
+A L +++ GR+IHA ++ D F ++L+DMY+KCG+++DAR LF+ T +A
Sbjct: 1218 KACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIA 1277
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SWNAMI +HG + +++ FE M G+ + VT I VLSACSH GLV + E F SM
Sbjct: 1278 SWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSM 1337
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
++ YG++ EHY+C+VD L R+GR+ EA ++ +P + SM N C + R+
Sbjct: 1338 QKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRET 1397
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+ E+ + +V+LSN+ AA +W + R +M++ NV+K PGFS V+ +N
Sbjct: 1398 GKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKN 1457
Query: 532 E 532
+
Sbjct: 1458 K 1458
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 212/436 (48%), Gaps = 19/436 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L + + L GK+ HA + T+ + L + L+ +Y+ CG ++SAR +FD P+ +
Sbjct: 632 ILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTS 691
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
++ W + SA ++ F L+R + T + V K C+ + +H
Sbjct: 692 RDLVTWNAILSAHADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHG 751
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
A ++G + DV V AL+++Y+K G + AR +F GM RDVV W M+ Y + E
Sbjct: 752 YAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYE 811
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYAR--RGDSNAAFAFFSRMTAEG---FV------ 246
A++LF GL P+ T + + AR + N ++ A G F+
Sbjct: 812 ALLLFSEFNRTGLRPDDVT----LCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDD 867
Query: 247 -PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
D++ WN +S F Q EA+ F M+ S + + +T +L +++G++
Sbjct: 868 GSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQ 927
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
IH +V R GL V G+ LI+MY K GS+ ART+F ++ SWN MI G+
Sbjct: 928 IHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGL 987
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSH-GGLVEKGLEIFRSMKERYGVKISKEHY 424
+ S+ +F +L G+ ++ T+ SVL ACS GG +I + + GV +
Sbjct: 988 EECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQI-HACAMKAGVVLDSFVS 1046
Query: 425 ACVVDMLCRSGRMVEA 440
++D+ +SG+M EA
Sbjct: 1047 TTLIDVYSKSGKMEEA 1062
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 204/435 (46%), Gaps = 28/435 (6%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
LV +YA G + AR++FD + +V + N M+ A TG EA+ FS R +
Sbjct: 768 LVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPD 827
Query: 113 KFTF---SIVLKACVGLLDIKKGKQVHAVATQM------GFENDVSVGNALIDMYSKCGL 163
T + V+K+ +L+ + KQ+ A T++ +DV N + + + G
Sbjct: 828 DVTLCTLARVVKSKQNVLEWQL-KQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGE 886
Query: 164 LCSARRVFHGMFER----DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNA 219
A F M D +++ M+S ++ ++ + + GL+ N
Sbjct: 887 TWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNC 946
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+I Y + G + A F +M DLV+WN MISG A S E ++ +F +L G
Sbjct: 947 LINMYVKTGSVSRARTVFWQMNE----VDLVSWNTMISGCALSGLEECSVGMFVDLLRGG 1002
Query: 280 IKPNNVTVTGVLQA-GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+ P+ TV VL+A L G + +IHA + G+ +D F + LID+YSK G +++A
Sbjct: 1003 LLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEA 1062
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
LF ++ASWNAM+ Y G ++ L+ M E G RAN++TL + A G
Sbjct: 1063 EFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAA--G 1120
Query: 399 GLV--EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP----MYVT 452
GLV ++G +I + +R G + + V+DM + G M A + ++P + T
Sbjct: 1121 GLVGLKQGKQIQAVVVKR-GFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWT 1179
Query: 453 NSMAGAFRNGCNIHG 467
++G NG H
Sbjct: 1180 TMISGCVENGQEEHA 1194
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 19 LLGKCMKSKALRQGKQVHA----LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L+ C AL QG+Q+HA L C D + + LV +YA CG++ AR +F +
Sbjct: 1216 LVKACSLLTALEQGRQIHANTVKLNCAFDPFVM---TSLVDMYAKCGNIEDARGLFKRTN 1272
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKG 132
+ N M++ A GN +EA+ +F M+ ++ TF VL AC GL+ +
Sbjct: 1273 TSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVS-EAY 1331
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
+ +++ G E ++ + L+D S+ G + A +V M FE + ++++ C
Sbjct: 1332 ENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNA-CR 1390
Query: 192 VSKVDEAVVLFERMKLEGLEPN 213
V +VD KL LEP+
Sbjct: 1391 V-QVDRETGKRVAEKLLALEPS 1411
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 284/543 (52%), Gaps = 35/543 (6%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C L +GK+VH + + + + L+ +Y CGDV SARL+FD++P
Sbjct: 201 CVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR 260
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N M+ G E + F MR + T + V+ AC L D + G+ +H
Sbjct: 261 DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIH 320
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A GF D+SV N+L MY G A ++F M +D+VSWT+MISGY D
Sbjct: 321 AYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPD 380
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA-----FAFFSRMTAEGFVP---- 247
+A+ + M + ++P++ T A++++ A GD + A +R+ + V
Sbjct: 381 KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLI 440
Query: 248 ----------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
++++W ++I+G + R EAL + M ++ ++PN +
Sbjct: 441 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAI 499
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T+T L A G++ G+EIHA V R G+ +D F +AL+DMY +CG + A + F +
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN-S 558
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
+ K+V SWN ++ Y + G +ELF+RM++ +R +E+T IS+L CS +V +GL
Sbjct: 559 QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL 618
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
F M E YGV + +HYACVVD+L R+G + EA+ ++++P+ ++ GA N C I
Sbjct: 619 MYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
H + DL + FE+ + +++L N+ A G+W E +R++MKE + G S
Sbjct: 678 HHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737
Query: 526 RVE 528
VE
Sbjct: 738 WVE 740
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 241/517 (46%), Gaps = 46/517 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ C +A +G +V+++ ++ ++ L + + ++ G++ A VF K+ N
Sbjct: 100 LVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERN 159
Query: 78 VFMLNWMVMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+F N +V A G F EA+ Y ++ + + +TF VL+ C G+ D+ +GK+VH
Sbjct: 160 LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVH 219
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ G+E D+ V NALI MY KCG + SAR +F M RD++SW +MISGY
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
E + LF M+ ++P+ T ++I++
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 224 --YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y G A FSRM + D+V+W MISG+ + ++A+ ++ M +K
Sbjct: 340 QMYLNAGSWREAEKLFSRMERK----DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ +TV VL A G + G E+H L + L V + LI+MYSKC + A +
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F KNV SW ++I + ++ +F R ++ ++ N +TL + L+AC+ G +
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGAL 514
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
G EI + R GV + ++DM R GRM A+ VT+
Sbjct: 515 MCGKEIHAHVL-RTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKDVTS--WNILLT 571
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
G + G+ + V + + + +R PD +S +C
Sbjct: 572 GYSERGQGSMVVELFDRMVKSRVR-PDEITFISLLCG 607
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 193/397 (48%), Gaps = 49/397 (12%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G +EA+ + M+E ++ F +++ C ++G +V+++A V +G
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM-KLEGL 210
NA + M+ + G L A VF M ER++ SW ++ GY DEA+ L+ RM + G+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 211 EPNQFTY-----------------------------------NAIIASYARRGDSNAAFA 235
+P+ +T+ NA+I Y + GD +A
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F RM D+++WNAMISG+ ++ +E L+LF M + P+ +T+T V+ A
Sbjct: 253 LFDRMPRR----DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
L G ++GR+IHA V G +D+ ++L MY GS ++A LF K++ SW
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
MI Y + + D +I+ + M ++ ++ +E+T+ +VLSAC+ G ++ G+E+ +
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL-----HKL 423
Query: 416 GVKISKEHYACV----VDMLCRSGRMVEAYDLLRQVP 448
+K Y V ++M + + +A D+ +P
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 252/481 (52%), Gaps = 41/481 (8%)
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
A+ F E+I + M + F+F +LK+C L G+Q+H + G E +
Sbjct: 26 AYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEP 85
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDV--VSWTSMISGYCNVSKVDEAVVLFERMK 206
V ALI MY KCGL+ AR+VF V + ++ISGY SKV +A +F RMK
Sbjct: 86 FVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMK 145
Query: 207 LEGLEPNQFT-----------------------------------YNAIIASYARRGDSN 231
G+ + T N+ I Y + G
Sbjct: 146 ETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVE 205
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
+ F M +G L+TWNA+ISG++Q+ + L+LF+ M SG+ P+ T+ VL
Sbjct: 206 SGRRLFDEMPVKG----LITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVL 261
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
+ G+ +IG+E+ LV G +VF +ALI MY++CG+L AR +F+I +K++
Sbjct: 262 SSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLV 321
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SW AMIGCYG HGM ++ + LF+ M++ G+R + + VLSACSH GL +KGLE+FR+M
Sbjct: 322 SWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM 381
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
K Y ++ EHY+C+VD+L R+GR+ EA + + +P+ ++ GA C IH D+
Sbjct: 382 KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDM 441
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
A + E +V++SNI + +R +M+E+ +K+PG+S VE +
Sbjct: 442 AELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKG 501
Query: 532 E 532
+
Sbjct: 502 K 502
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 177/414 (42%), Gaps = 47/414 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C G+Q+H + + F L + L+ +Y CG V AR VF++ P+
Sbjct: 56 ILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVL-TALISMYCKCGLVEDARKVFEENPHS 114
Query: 77 NVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ + + + S +T N +A F M+E + T ++ C + G+
Sbjct: 115 SQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRS 174
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + G ++V+V N+ I MY KCG + S RR+F M + +++W ++ISGY
Sbjct: 175 LHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGL 234
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
+ + LFE+MK G+ P+ FT NA
Sbjct: 235 AYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNA 294
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+I+ YAR G+ A A F M V LV+W AMI + L LF M+ G
Sbjct: 295 LISMYARCGNLAKARAVFDIMP----VKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRG 350
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
I+P+ VL A +G G E+ A+ L S L+D+ + G L +A
Sbjct: 351 IRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEA 410
Query: 339 RTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLIS 390
+ ++ + A W A++G H VD + F +++E E M L+S
Sbjct: 411 MEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMS 464
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
+WN + A E++ L++ ML SG P+ + +L++ G+++H
Sbjct: 16 TSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 75
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV--ASWNAMIGCYGKHGMVD 367
V R G + F +ALI MY KCG ++DAR +FE + +NA+I Y + V
Sbjct: 76 VIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACS 396
+ +F RM E G+ + VT++ ++ C+
Sbjct: 136 DAAFMFRRMKETGVSVDSVTILGLVPLCT 164
>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 275/532 (51%), Gaps = 43/532 (8%)
Query: 32 GKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP--NVFMLNWMVMAS 88
G++VH L+ T L S+ + L+ +Y G V A VF++ + + N M+
Sbjct: 203 GREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGL 262
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
A G +EA+ F M+E R + TF V+ +C + QVHA A +MGFE
Sbjct: 263 ASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCS---SARVSHQVHAQAIKMGFEACT 319
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
V NA + MYS CG L + VF + E+D++SW +I Y + A++ F +M+
Sbjct: 320 PVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRA 379
Query: 209 GLEPNQFTY--------------------------------NAIIASYARRGDSNAAFAF 236
G+EP++FT NA+++++++ G A+
Sbjct: 380 GIEPDEFTIGSLLASSESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQV 439
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F+ M++ P+L++WN +ISGF + + L+ F +L+S +KPN T++ VL
Sbjct: 440 FNNMSS----PNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICAS 495
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+++ G++IH + R G+ G+ALI MY+KCG L + +F + +++ SWNAM
Sbjct: 496 ISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAM 555
Query: 357 IGCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
I Y +HG ++ F+ M + G++ ++ T +VLSACSH GLV+ G IF SM Y
Sbjct: 556 ISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDY 615
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTM 475
G + +H +C+VD+L R+G + EA L+ + + +S+ + C HG L +
Sbjct: 616 GFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIV 675
Query: 476 GEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
E+ P +V+LSNI AA G+W EA N R +M++ V KQPG S +
Sbjct: 676 AGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCSWI 727
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 137/560 (24%), Positives = 239/560 (42%), Gaps = 90/560 (16%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
L L C + G Q+HA L ++ + + L+ YA D+ S + VF++I
Sbjct: 56 LSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIE 115
Query: 75 NPNVFMLNWMVMASAFT---------------------------------GNFQEAIGYF 101
NP+V+ +W + SA T + + A+ F
Sbjct: 116 NPDVY--SWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLF 173
Query: 102 SLMREFIYRCNKFTFSIVLKAC-VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSK 160
M + R +K+TF+ VL C + LLD G++VH + + GF SV NAL+ MY
Sbjct: 174 REMHQLGVRHDKYTFASVLSLCSLELLDF--GREVHTLVIKTGFLVRASVINALLTMYFN 231
Query: 161 CGLLCSARRVFHGMFE--RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY- 217
G + A VF D +++ MI G +V + +EA+++F+ M+ L P + T+
Sbjct: 232 SGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFV 291
Query: 218 -------------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFV 246
NA + Y+ G+ +A F R+ +
Sbjct: 292 SVMSSCSSARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEK--- 348
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
DL++WN +I +AQ A+ F M +GI+P+ T+ +L + + S++I +
Sbjct: 349 -DLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLAS---SESLEIVKMF 404
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
ALV + GL+ + +AL+ +SK G ++ A +F N+ SWN +I + +G
Sbjct: 405 QALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFT 464
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
+E F +L ++ N TL VLS C+ + G +I + R GV
Sbjct: 465 LQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYIL-RSGVFSVTSLGNA 523
Query: 427 VVDMLCRSGRM---VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMG 483
++ M + G + + ++++ + N+M A+ HG+ AV + + G
Sbjct: 524 LITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQ----HGKGKEAVHFFKAMQDSG 579
Query: 484 LRKPD--GFVMLSNICAADG 501
KPD F + + C+ G
Sbjct: 580 GVKPDQATFTAVLSACSHAG 599
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 199/463 (42%), Gaps = 90/463 (19%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
+ + FT S L AC L G Q+HA + Q G + VGN L+ Y+K L S +R
Sbjct: 50 KPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQR 109
Query: 170 VFHGMFERDVVSWTSMIS--------GY----------------------CNVSKVDE-A 198
VF+ + DV SWT+++S GY C +K E A
Sbjct: 110 VFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIA 169
Query: 199 VVLFERMKLEGLEPNQFTY----------------------------------NAIIASY 224
+ LF M G+ +++T+ NA++ Y
Sbjct: 170 LNLFREMHQLGVRHDKYTFASVLSLCSLELLDFGREVHTLVIKTGFLVRASVINALLTMY 229
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
G A+ F AE V D +T+N MI G A R+ EAL +FK M + ++P
Sbjct: 230 FNSGKVADAYEVFEE--AESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTE 287
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
+T V+ + S ++ ++HA +MG +A + MYS CG+L +F+
Sbjct: 288 LTFVSVMSS---CSSARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDR 344
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
K++ SWN +I Y + +I F +M G+ +E T+ S+L++ +V
Sbjct: 345 LEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIV--- 401
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV--PMYVT--NSMAGAFR 460
++F+++ + G+ E +V + G++ +AY + + P ++ ++G
Sbjct: 402 -KMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLF 460
Query: 461 NGCNIHGRRDLAVTMGEEFFE--MGLRKPDGFVM--LSNICAA 499
NG + G E+F+E M KP+ + + + +ICA+
Sbjct: 461 NGFTLQGL--------EQFYELLMSTLKPNAYTLSIVLSICAS 495
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 160/329 (48%), Gaps = 10/329 (3%)
Query: 25 KSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
S++L K AL+ N LN + + LV ++ G + A VF+ + +PN+ N
Sbjct: 394 SSESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNT 453
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
++ F G + + F + + N +T SIVL C + ++ GKQ+H + G
Sbjct: 454 IISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSG 513
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
+ S+GNALI MY+KCG L + R+F+ M RD+VSW +MIS Y K EAV F+
Sbjct: 514 VFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFK 573
Query: 204 RMKLE-GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQ 261
M+ G++P+Q T+ A++++ + G + F+ M + GF P + ++ +
Sbjct: 574 AMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGR 633
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
+ EA +L +K + + A G++++GR + + + + D
Sbjct: 634 AGYLEEAERLINS---KHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEIEQN-DPAV 689
Query: 322 GSALIDMYSKCGSLKDA---RTLFEITRI 347
L ++Y+ G ++A R L + TR+
Sbjct: 690 YVLLSNIYAAAGQWEEAANTRDLMQKTRV 718
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 16 LDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C ALR GKQ+H +L + ++ SL + L+ +YA CGD++ + +F+ +
Sbjct: 486 LSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMN 545
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF-IYRCNKFTFSIVLKAC--VGLLDIKK 131
++ N M+ A A G +EA+ +F M++ + ++ TF+ VL AC GL+D
Sbjct: 546 GRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVD--D 603
Query: 132 GKQV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS-WTSMISG 188
G ++ +++ GFE + ++D+ + G L A R+ + + V S W ++ S
Sbjct: 604 GTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSA 662
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 124/299 (41%), Gaps = 36/299 (12%)
Query: 241 TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGS 299
T + L+ N +++ +S + +++LF + S +KP++ T++ L A
Sbjct: 9 TTKNAAEQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRY 68
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
G ++HA + GL G+ L+ Y+K L + +F +V SW ++
Sbjct: 69 AASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSA 128
Query: 360 YGKHGMV-------------------------------DSSIELFERMLEEGMRANEVTL 388
K G + + ++ LF M + G+R ++ T
Sbjct: 129 CTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTF 188
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
SVLS CS L++ G E+ ++ + G + ++ M SG++ +AY++ +
Sbjct: 189 ASVLSLCSL-ELLDFGREV-HTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAE 246
Query: 449 MYVTNSMA-GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHE 505
V + + G GR + A+ M +E E LR + FV + + C++ H+
Sbjct: 247 STVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSSARVSHQ 305
>gi|449527015|ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 186/591 (31%), Positives = 296/591 (50%), Gaps = 74/591 (12%)
Query: 9 NNLSVN--YLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNS 65
NN+ +N LL C S +GKQ H L+ + L IF + S LV YA D++
Sbjct: 97 NNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDISG 156
Query: 66 ARLVFDKIPNPN----------------------VFM-------LNWMVMASAFT---GN 93
A+ VFD++ + N +FM + W M SA+ N
Sbjct: 157 AKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARSEHN 216
Query: 94 FQEAIGYFSLMR-EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGN 152
+ + F MR N+FTF V++AC + + GK VH + T+ GF D SV +
Sbjct: 217 CKRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCS 276
Query: 153 ALIDMYSKCGLLCSARRVFHGM-------------------------------FERDVVS 181
ALI Y +C + SA+ V+ M E++ VS
Sbjct: 277 ALILFYCQCEAIDSAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVS 336
Query: 182 WTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT 241
+ M+ GY +++ + LFERM + N +I+ Y+R G+ + AF F +
Sbjct: 337 YNLMLKGYATSGRIEGSKRLFERMT----HKTTSSLNTMISVYSRNGEIDKAFKLFESVK 392
Query: 242 AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
+EG D VTWN+MISG+ Q+ + ALKL+ M + ++ + T + + QA IQ
Sbjct: 393 SEG---DPVTWNSMISGYIQNHQHEGALKLYITMCRTSVERSRSTFSALFQACTCLEYIQ 449
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
+G+ +H R +V+ G++LIDMY+KCGS+ DA+T F + NVA++ A+I Y
Sbjct: 450 LGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCLPNVAAFTALINGYV 509
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
HG+ + +F+ ML+ + N TL+ +LSACS G+V++G+ +F SM++ YGV +
Sbjct: 510 HHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTVFHSMEKCYGVIPTL 569
Query: 422 EHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFE 481
EHYACVVD+L RSGR+ EA +R +P+ + GA N C +L ++ ++
Sbjct: 570 EHYACVVDLLGRSGRLYEAEAFIRCMPIEADRVIWGALLNACWFWMDLELGESVAKKVLS 629
Query: 482 MGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ + +++LSNI A G+W E N+R+ + V+K G S ++ N+
Sbjct: 630 LDPKAISAYIILSNIYAKLGKWVEKINVRRKLMSLKVKKIRGCSWIDVNNK 680
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 184/403 (45%), Gaps = 46/403 (11%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSI 118
G ++ A+ +F+++P +V ++W +M S ++ G + EA+ S M + N+ TFS
Sbjct: 51 GHLDLAQTLFNEMPVRSV--VSWNIMISGYSKFGKYSEALNLASEMHCNNVKLNETTFSS 108
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYS------------------- 159
+L C +GKQ H + + G + VG+AL+ Y+
Sbjct: 109 LLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDKN 168
Query: 160 ------------KCGLLCSARRVFHGMFERDVVSWTSMISGYC-NVSKVDEAVVLFERMK 206
KC L+ A +F + RDVV+WT+MIS Y + + LF M+
Sbjct: 169 DLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARSEHNCKRGLELFCSMR 228
Query: 207 LEG-LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
+ G +EPN+FT+++++ + R + +T GF D +A+I + Q +
Sbjct: 229 MNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAI 288
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
+ A ++ M +K +N + G++ AG + + +I C++ V + + +
Sbjct: 289 DSAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEI-------FCKLREKNPV-SYNLM 340
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
+ Y+ G ++ ++ LFE K +S N MI Y ++G +D + +LFE + EG
Sbjct: 341 LKGYATSGRIEGSKRLFERMTHKTTSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTW 400
Query: 386 VTLIS-VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
++IS + H G ++ + + R+ ER S AC
Sbjct: 401 NSMISGYIQNHQHEGALKLYITMCRTSVERSRSTFSALFQACT 443
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 10/208 (4%)
Query: 208 EGLE---PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
EGL N + N I+ + R G + A F+ M V +V+WN MISG+++ +
Sbjct: 28 EGLHTENSNIISTNIYISRHVRDGHLDLAQTLFNEMP----VRSVVSWNIMISGYSKFGK 83
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+EAL L M + +K N T + +L +G G++ H LV + GL I GSA
Sbjct: 84 YSEALNLASEMHCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSA 143
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+ Y+ + A+ +F+ KN W+ ++ Y K ++D +++LF ++ + A
Sbjct: 144 LVYFYANINDISGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVA- 202
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMK 412
T+IS + H ++GLE+F SM+
Sbjct: 203 WTTMISAYARSEHN--CKRGLELFCSMR 228
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 137/356 (38%), Gaps = 99/356 (27%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N I + + G L A+ +F+ M R VVSW MISGY K EA+ L M ++
Sbjct: 41 NIYISRHVRDGHLDLAQTLFNEMPVRSVVSWNIMISGYSKFGKYSEALNLASEMHCNNVK 100
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF----------------VPDL------ 249
N+ T++++++ A G S+ F + G + D+
Sbjct: 101 LNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDISGAKQV 160
Query: 250 ---------VTWNAMISGFAQSKRENEALKLFK--------------------------- 273
+ W+ ++ G+ + ++AL LF
Sbjct: 161 FDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARSEHNCKRG 220
Query: 274 -----GMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
M ++G ++PN T V++A G + G+ +H ++ + G H D SALI
Sbjct: 221 LELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALIL 280
Query: 328 MYSKC-------------------------------GSLKDARTLFEITRIKNVASWNAM 356
Y +C G + DA +F R KN S+N M
Sbjct: 281 FYCQCEAIDSAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLM 340
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
+ Y G ++ S LFERM + +L +++S S G ++K ++F S+K
Sbjct: 341 LKGYATSGRIEGSKRLFERMTHK----TTSSLNTMISVYSRNGEIDKAFKLFESVK 392
>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/544 (29%), Positives = 285/544 (52%), Gaps = 39/544 (7%)
Query: 19 LLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C K +L ++H+ LL ++F +++ LV VY+ C +SARLVFD++P
Sbjct: 34 VLKACAKLPSLEDATKLHSHILLTGFQAHVF-VQTALVDVYSKCCCFHSARLVFDQMPIK 92
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N ++ A + ++ G M+ + TF+ L +C + +G +H
Sbjct: 93 SLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASC----SLPQGLSIH 148
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
T++G + + + N+++ MY + + A VF+ + ++ +VSWT ++ GY + V
Sbjct: 149 GYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVA 208
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF----------- 245
+ +F +M+ + + P+ + +I+ G+ A S + GF
Sbjct: 209 KVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLV 268
Query: 246 -----VPDLVT---------------WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
DLV+ W +MISG+AQ NEAL LF +L + +PN +
Sbjct: 269 AMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNEL 328
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T+ VL A GS+++G EI + GL D+ ++LI M+ KCGS+K A+ LFE
Sbjct: 329 TLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERI 388
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACSHGGLVEKG 404
K++A W+AMI Y HGM ++ LF +M E G++ + + SVL ACSH GL+E G
Sbjct: 389 PNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACSHSGLIEDG 448
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
L+ FRSM++ +G++ S +HY+C+VD+L R+G + A ++++P+ V + F + C
Sbjct: 449 LKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARVWAPFLSACY 508
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
H +L + F++ R FV+++N+ + G+W EA R I+ + + K+PG+
Sbjct: 509 THHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKWKEAAKARSIINARGLVKEPGW 568
Query: 525 SRVE 528
S++E
Sbjct: 569 SQIE 572
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 200/425 (47%), Gaps = 51/425 (12%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
++FTF VLKAC L ++ ++H+ GF+ V V AL+D+YSKC SAR VF
Sbjct: 27 SEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSARLVF 86
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------- 217
M + +VSW S+IS +C +D++ + ++M+L GLE + T+
Sbjct: 87 DQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCSLPQGLS 146
Query: 218 -----------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
N+I++ Y R + A + F + + +V+W ++ G+
Sbjct: 147 IHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQK----SIVSWTIILGGYL 202
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
+ + +F M + P+++ ++ L+G++ + +H+L+ + G
Sbjct: 203 SAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDP 262
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
+ L+ MY+KC L AR +F+ K+V W +MI Y + G + ++ LF +L
Sbjct: 263 IDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTA 322
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY----GVKISKEHYACVVDMLCRSGR 436
R NE+TL +VLSAC+ G + G EI E+Y G+ ++ M C+ G
Sbjct: 323 SRPNELTLATVLSACAEMGSLRMGEEI-----EQYILLNGLGSDLRVQTSLIHMFCKCGS 377
Query: 437 MVEAYDLLRQVPMYVTNSMA--GAFRNGCNIHGRRDLAVTMGEEFF-EMGLRKPDGFVML 493
+ +A L ++P +A A NG +HG A+ + + E+G+ KPD V
Sbjct: 378 IKKAQALFERIP---NKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGI-KPDAIVYT 433
Query: 494 SNICA 498
S + A
Sbjct: 434 SVLLA 438
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 135/274 (49%), Gaps = 7/274 (2%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNS 65
P + + VN + C C S L VH+LL + + + + LV +YA C D+ S
Sbjct: 224 PDSIVFVNLISC----CKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVS 279
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
AR VFD + +VF+ M+ A G EA+ F+++ R N+ T + VL AC
Sbjct: 280 ARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAE 339
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
+ ++ G+++ G +D+ V +LI M+ KCG + A+ +F + +D+ W++M
Sbjct: 340 MGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAM 399
Query: 186 ISGYCNVSKVDEAVVLFERMKLE-GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE- 243
I+GY EA+ LF +M+ E G++P+ Y +++ + + G +F M +
Sbjct: 400 INGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACSHSGLIEDGLKYFRSMQKDF 459
Query: 244 GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
G P + ++ ++ ++ AL+ + M V
Sbjct: 460 GIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPV 493
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
SG+ + T VL+A S++ ++H+ + G VF +AL+D+YSKC
Sbjct: 21 TSGVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFH 80
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
AR +F+ IK++ SWN++I + + +D S + ++M G+ + T L++CS
Sbjct: 81 SARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCS 140
Query: 397 -------HGGLVEKGLEI 407
HG + + GL++
Sbjct: 141 LPQGLSIHGYITKLGLDL 158
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 95/222 (42%), Gaps = 35/222 (15%)
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF----------------------- 245
G+ ++FT+ ++ + A+ A S + GF
Sbjct: 23 GVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSA 82
Query: 246 --------VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+ LV+WN++IS + +++ + K M + G++ ++ T TG L +
Sbjct: 83 RLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLA----S 138
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
S+ G IH + ++GL + + ++++ MY + + A ++F K++ SW ++
Sbjct: 139 CSLPQGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIIL 198
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
G Y G V +F +M + + + + ++++S C G
Sbjct: 199 GGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSG 240
>gi|357164322|ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Brachypodium distachyon]
Length = 593
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/514 (32%), Positives = 264/514 (51%), Gaps = 43/514 (8%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
D A L +P +++ + ++ + F+ + R R + +T L
Sbjct: 55 ADAVHALLRLRASAHPFNALISHLTLSGEPSSAFRTFAALLAAGRGEPRRPDGYTLPATL 114
Query: 121 KACVGLLDIK------KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
KAC L +G+QVHAVA + GF + V NAL+ +Y CG ARRVF M
Sbjct: 115 KACARLGAGGDDGGLREGRQVHAVAEKGGFLGRLPVRNALVTLYGVCGECGDARRVFDEM 174
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
RDVVSWT+++S + + EA+VL +M + PN+ T ++ + R G + A
Sbjct: 175 ASRDVVSWTALVSAFVRGGRFAEALVLVGQMDVV---PNEGTLACVLVACGRLGAARAGK 231
Query: 235 AFFS-------------------------------RMTAEGFVPDLVTWNAMISGFAQSK 263
A R+ V D+++W MISG Q K
Sbjct: 232 AVHGWYLRRESDLKLIVGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCK 291
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
++AL++F M S +KP+ V ++ VL A G+++ GR +H + R G+ DV G+
Sbjct: 292 LPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLGALESGRWVHEYIERKGIEWDVHVGT 351
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
+L+DMY+KCG L+ + ++F +KN++SWNA+I + HG ++E F+RM+ G+
Sbjct: 352 SLVDMYAKCGCLETSLSIFRKMPLKNLSSWNALINGFALHGHGREALEHFDRMVASGLAP 411
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
NEV+ I VL AC H GLV++GL++F SMK Y + +EHY VVD+L R+G + EAY +
Sbjct: 412 NEVSFIIVLGACCHSGLVQEGLQLFESMKNSYKLSPWEEHYGSVVDLLGRAGLIHEAYSV 471
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ +PM GA + C H + D + + E+ + + +LSNI A + W
Sbjct: 472 TKAMPMRPAVFTWGALLSACQAHRQVDFSQQILRHVHELESSESGVYALLSNIYAVNHRW 531
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVE---KRNEFV 534
+ + +R +M EK +QK+PG S +E K +EFV
Sbjct: 532 ADVKRVRGLMSEKGLQKEPGSSVIEVNGKTSEFV 565
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 201/426 (47%), Gaps = 59/426 (13%)
Query: 31 QGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
+G+QVHA+ L +++ LV +Y CG+ AR VFD++ + +V ++W + SA
Sbjct: 131 EGRQVHAVAEKGGFLGRLPVRNALVTLYGVCGECGDARRVFDEMASRDV--VSWTALVSA 188
Query: 90 FT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
F G F EA+ L+ + N+ T + VL AC L + GK VH + +
Sbjct: 189 FVRGGRFAEAL---VLVGQMDVVPNEGTLACVLVACGRLGAARAGKAVHGWYLRRESDLK 245
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
+ VGNA++DMY KC L ARRVF + RDV+SWT MISG +A+ +F M+
Sbjct: 246 LIVGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQK 305
Query: 208 EGLEPNQFTYNAIIAS-----------------------------------YARRGDSNA 232
++P++ + ++++ YA+ G
Sbjct: 306 SRVKPDKVVLSTVLSACTSLGALESGRWVHEYIERKGIEWDVHVGTSLVDMYAKCGCLET 365
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
+ + F +M + +L +WNA+I+GFA EAL+ F M+ SG+ PN V+ VL
Sbjct: 366 SLSIFRKMP----LKNLSSWNALINGFALHGHGREALEHFDRMVASGLAPNEVSFIIVLG 421
Query: 293 AGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN-V 350
A +G +Q G ++ ++ L +++D+ + G + +A ++ + ++ V
Sbjct: 422 ACCHSGLVQEGLQLFESMKNSYKLSPWEEHYGSVVDLLGRAGLIHEAYSVTKAMPMRPAV 481
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSACSH---------GGL 400
+W A++ H VD S ++ + E E + L+S + A +H G +
Sbjct: 482 FTWGALLSACQAHRQVDFSQQILRHVHELESSESGVYALLSNIYAVNHRWADVKRVRGLM 541
Query: 401 VEKGLE 406
EKGL+
Sbjct: 542 SEKGLQ 547
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 147/303 (48%), Gaps = 15/303 (4%)
Query: 16 LDCLLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L C+L C + A R GK VH L +DL + + + ++ +Y C ++ AR VFD++
Sbjct: 214 LACVLVACGRLGAARAGKAVHGWYLRRESDLKLI-VGNAVLDMYVKCEKLDLARRVFDRL 272
Query: 74 PNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+V ++W +M S +A+ F+ M++ + +K S VL AC L ++
Sbjct: 273 LVRDV--ISWTIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLGALES 330
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G+ VH + G E DV VG +L+DMY+KCG L ++ +F M +++ SW ++I+G+
Sbjct: 331 GRWVHEYIERKGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSWNALINGFAL 390
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM-TAEGFVPDLV 250
EA+ F+RM GL PN+ ++ ++ + G F M + P
Sbjct: 391 HGHGREALEHFDRMVASGLAPNEVSFIIVLGACCHSGLVQEGLQLFESMKNSYKLSPWEE 450
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA----GGLTGSIQIGREI 306
+ +++ ++ +EA + K M ++P T +L A + S QI R +
Sbjct: 451 HYGSVVDLLGRAGLIHEAYSVTKAM---PMRPAVFTWGALLSACQAHRQVDFSQQILRHV 507
Query: 307 HAL 309
H L
Sbjct: 508 HEL 510
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 26/202 (12%)
Query: 219 AIIASYAR-----RGDSNAAFAFFS-RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLF 272
A++A +AR R ++A A R +A F NA+IS S + A + F
Sbjct: 39 AVLAHFARHLASARAPADAVHALLRLRASAHPF-------NALISHLTLSGEPSSAFRTF 91
Query: 273 KGMLVSGI----KPNNVTVTGVLQAGGLTGSIQI------GREIHALVCRMGLHIDVFTG 322
+L +G +P+ T+ L+A G+ GR++HA+ + G +
Sbjct: 92 AALLAAGRGEPRRPDGYTLPATLKACARLGAGGDDGGLREGRQVHAVAEKGGFLGRLPVR 151
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+AL+ +Y CG DAR +F+ ++V SW A++ + + G ++ L +M +
Sbjct: 152 NALVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFVRGGRFAEALVLVGQM---DVV 208
Query: 383 ANEVTLISVLSACSHGGLVEKG 404
NE TL VL AC G G
Sbjct: 209 PNEGTLACVLVACGRLGAARAG 230
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 168/511 (32%), Positives = 262/511 (51%), Gaps = 33/511 (6%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYF-SLMR 105
L S +V +Y V AR VFD++P + + W M S + N + E+I F L+
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTIL--WNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
E R + T +L A L +++ G Q+H++AT+ G + V I +YSKCG +
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIK 273
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-- 223
A +F D+V++ +MI GY + + + ++ LF+ + L G + T +++
Sbjct: 274 MASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSG 333
Query: 224 -----YARRGD------------SNAAFAFFSRMTA---------EGFVPDLVTWNAMIS 257
YA G S A +S++ E L +WNAMIS
Sbjct: 334 HLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
G+ Q+ +A+ LF+ M S PN VT+T +L A G++ +G+ +H LV
Sbjct: 394 GYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
++ +ALI MY+KCGS+ +AR LF+ KN +WN MI YG HG ++ +F ML
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEML 513
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
G+ VT + VL ACSH GLV++G EIF SM RYG + S +HYACVVD+L R+G +
Sbjct: 514 NSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHL 573
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
A + +P+ S+ C IH +LA T+ E+ FE+ V+LSNI
Sbjct: 574 QRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIH 633
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+AD + +A +R+ K++ + K PG++ +E
Sbjct: 634 SADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/541 (23%), Positives = 236/541 (43%), Gaps = 64/541 (11%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDK 72
N+LD +S ++ Q HA + + N SL +KL + G + AR +F
Sbjct: 22 NFLDLF----KRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLS 77
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKK 131
+ P+VF+ N ++ + + ++ F+ +R+ + N T++ + A G D +
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA 137
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY-- 189
G +H A G ++++ +G+ ++ MY K + AR+VF M E+D + W +MISGY
Sbjct: 138 GCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 190 ------------------------CNVSKVDEAVVLFERMKL----------EGLEPNQF 215
+ + AV + ++L G + +
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 216 TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
I+ Y++ G A F PD+V +NAMI G+ + +L LFK +
Sbjct: 258 VLTGFISLYSKCGKIKMASTLFREFRR----PDIVAYNAMIHGYTSNGETELSLSLFKEL 313
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
++SG K + T+ ++ ++G + + IH + +AL +YSK +
Sbjct: 314 MLSGAKLKSSTLVSLVP---VSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEI 370
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ AR LF+ + K++ SWNAMI Y ++G+ + +I LF M N VT+ +LSAC
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSAC 430
Query: 396 SHGGLVEKG---LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPM 449
+ G + G ++ RS + +S ++ M + G + EA +D + +
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVS----TALIGMYAKCGSIAEARRLFDFMPKKNE 486
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK-PDGFVMLSNICAADGEWHEAEN 508
N+M +G +HG A+T+ E G+ P F+ + C+ G E +
Sbjct: 487 VTWNTMI----SGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDE 542
Query: 509 L 509
+
Sbjct: 543 I 543
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 174/404 (43%), Gaps = 41/404 (10%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVG---VYAGCGDVNSAR 67
L L +L + + LR G Q+H+L +S L G +Y+ CG + A
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSL--ATKTGCYSHDYVLTGFISLYSKCGKIKMAS 276
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
+F + P++ N M+ +T N + + SL +E + K S ++
Sbjct: 277 TLFREFRRPDIVAYNAMI--HGYTSNGETELS-LSLFKELMLSGAKLKSSTLVSLVPVSG 333
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+ +H + + F + SV AL +YSK + SAR++F E+ + SW +MIS
Sbjct: 334 HLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD------------------ 229
GY ++A+ LF M+ PN T I+++ A+ G
Sbjct: 394 GYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 230 ----SNAAFAFFSR--MTAEG-----FVP--DLVTWNAMISGFAQSKRENEALKLFKGML 276
S A +++ AE F+P + VTWN MISG+ EAL +F ML
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEML 513
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSL 335
SGI P VT VL A G ++ G EI ++++ R G V + ++D+ + G L
Sbjct: 514 NSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHL 573
Query: 336 KDARTLFEITRIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLE 378
+ A E I+ S W ++G H + + + E++ E
Sbjct: 574 QRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFE 617
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 168/484 (34%), Positives = 260/484 (53%), Gaps = 19/484 (3%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ LV Y + AR +FD +P NV N M+ A G +A+ F M E
Sbjct: 133 TALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPER--- 189
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N +++ V+ A + ++ + + +M E DV ++ SK G + AR +
Sbjct: 190 -NVVSWNTVITA---FMQRRRVDEAQELFNRMP-ERDVISWTTMVAGLSKNGRIDDARLL 244
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M R+VVSW +MI GY ++DEA LFE+M L ++N +I + + G
Sbjct: 245 FDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELS----SWNTMITGFIQNGKL 300
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTG 289
A FF +M+ + ++VTW A+ISG Q R EALK+F M + +KPN T
Sbjct: 301 ERAVDFFYKMSNK----NVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVS 356
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI-- 347
VL A ++ G++IH ++ + SALI+MYSKCG L+ AR +F+ I
Sbjct: 357 VLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGH 416
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
++V SWN MI Y HG +I LF+ M G R + VT I++LSACSH GLV++GL++
Sbjct: 417 RDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKL 476
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
F ++ +K+ ++H+ C+VD+ R+GR+ EA+D ++ + + + S+ A GCN+HG
Sbjct: 477 FENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHG 536
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
DL E+ E +++LSNI A+ G+W EA +R MK+K ++KQPG S +
Sbjct: 537 HIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWI 596
Query: 528 EKRN 531
E N
Sbjct: 597 EVGN 600
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 158/350 (45%), Gaps = 42/350 (12%)
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
++V+ N LI K G + AR+VF M +RDVVSWT++I+GY ++EA LF+R
Sbjct: 64 SNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDR- 122
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
N T+ A+++ Y R A F M V ++++WN MI G+A+
Sbjct: 123 --NDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMP----VKNVISWNTMIEGYARKGWI 176
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
++AL LF+ M + N +T +Q + E L RM DV + + +
Sbjct: 177 DQALDLFEXMPERNVVSWNTVITAFMQRRRVD-------EAQELFNRMP-ERDVISWTTM 228
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA-- 383
+ SK G + DAR LF+ ++NV SWN MI Y ++ +D + +LFE+M E + +
Sbjct: 229 VAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWN 288
Query: 384 -------------------------NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
N VT +V+S G E+ L+IF M+ VK
Sbjct: 289 TMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVK 348
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
++ + V+ + + E + + + V +A N++ +
Sbjct: 349 PNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 398
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 28/243 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFD--KIPN 75
+LG C K AL +G+Q+H ++ T + + S L+ +Y+ CG++ AR +FD I +
Sbjct: 357 VLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGH 416
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGK 133
+V N M+ A A G+ +AI F M+ +R + T+ +L AC GL+D +G
Sbjct: 417 RDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVD--EGL 474
Query: 134 QVHAVATQMGFEN---DVSVG------NALIDMYSKCGLLCSARRVFHGMFERDVVS-WT 183
++ FEN D S+ L+D++ + G L A G+ + S W
Sbjct: 475 KL--------FENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWA 526
Query: 184 SMISGYCNV-SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA 242
++++G CNV +D + E++ LE N TY + YA G A +M
Sbjct: 527 ALLAG-CNVHGHIDLGKLTAEKL-LETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKD 584
Query: 243 EGF 245
+G
Sbjct: 585 KGL 587
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 37/194 (19%)
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY 360
Q+ +I + V + +V + LI K G + +AR +FE ++V SW A+I Y
Sbjct: 48 QVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGY 107
Query: 361 GKHGMVDSSIELFER---------------------MLEEGMR-------ANEVTLISVL 392
K GM++ + LF+R +EE R N ++ +++
Sbjct: 108 IKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMI 167
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---- 448
+ G +++ L++F M ER V + V+ + R+ EA +L ++P
Sbjct: 168 EGYARKGWIDQALDLFEXMPERNVVS-----WNTVITAFMQRRRVDEAQELFNRMPERDV 222
Query: 449 MYVTNSMAGAFRNG 462
+ T +AG +NG
Sbjct: 223 ISWTTMVAGLSKNG 236
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/418 (36%), Positives = 234/418 (55%), Gaps = 9/418 (2%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
FTFS ++KAC + ++ G+ VH + GF++ V V AL+D Y G + ARRVF
Sbjct: 9 TSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEARRVF 68
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M ERDV +WT+MIS + + A LF+ M + N ++NA+I Y+R +
Sbjct: 69 DEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVR----NTASWNAMIDGYSRLRNVE 124
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
+A FS+M D+++W MI+ ++Q+K+ EAL +F M +GI P+ VT+ ++
Sbjct: 125 SAELLFSQMPNR----DIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATII 180
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A G++ +G+EIH MG +DV+ GSALIDMY+KCGSL + +F R KN+
Sbjct: 181 SACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLF 240
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
WN++I HG + ++ +F RM E ++ N VT ISVL AC+H GLVE+G + F SM
Sbjct: 241 CWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSM 300
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
+ + EHY C+VD+L ++G + +A +L+R + M + + GA GC +H +
Sbjct: 301 SRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKI 360
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK-QPGFSRVE 528
A E + + +L N+ A W E N+R MKE V+K PG S +E
Sbjct: 361 AQVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWIE 418
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 138/255 (54%), Gaps = 8/255 (3%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYR 110
++ Y+ +V SA L+F ++PN ++ ++W M + ++ N F+EA+ F+ M+
Sbjct: 113 MIDGYSRLRNVESAELLFSQMPNRDI--ISWTTMIACYSQNKQFREALAVFNEMQTNGID 170
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
++ T + ++ AC L + GK++H A +MGF+ DV +G+ALIDMY+KCG L + V
Sbjct: 171 PDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVV 230
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F + ++++ W S+I G +EA+ +F RM+ E ++PN T+ +++ + G
Sbjct: 231 FFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLV 290
Query: 231 NAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
F M+ + P++ + M+ ++ +AL+L + M ++PN+V
Sbjct: 291 EEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSM---RMEPNSVIWGA 347
Query: 290 VLQAGGLTGSIQIGR 304
+L L +++I +
Sbjct: 348 LLGGCKLHRNLKIAQ 362
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 153/379 (40%), Gaps = 83/379 (21%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L+ C L G+ VH + D ++F +++ LV Y G + AR VFD++
Sbjct: 16 LVKACSLVSELGFGEAVHGHIWKYGFDSHVF-VQTALVDFYGNAGKIVEARRVFDEMSER 74
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+VF M+ A TG+ A F
Sbjct: 75 DVFAWTTMISVHARTGDMSSARQLFD---------------------------------- 100
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+M N S NA+ID YS+ + SA +F M RD++SWT+MI+ Y +
Sbjct: 101 ----EMPVRNTAS-WNAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFR 155
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
EA+ +F M+ G++P++ T II++
Sbjct: 156 EALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALI 215
Query: 224 --YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ G + + F ++ + +L WN++I G A EAL +F M IK
Sbjct: 216 DMYAKCGSLDKSLVVFFKLRKK----NLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIK 271
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCR-MGLHIDVFTGSALIDMYSKCGSLKDART 340
PN VT VL A G ++ GR+ + R + ++ ++D+ K G L+DA
Sbjct: 272 PNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALE 331
Query: 341 LFEITRIK-NVASWNAMIG 358
L R++ N W A++G
Sbjct: 332 LVRSMRMEPNSVIWGALLG 350
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 117/291 (40%), Gaps = 75/291 (25%)
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY----- 329
M+ + + P + T + +++A L + G +H + + G VF +AL+D Y
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 330 --------------------------SKCGSLKDARTLFEITRIKNVASWNA-------- 355
++ G + AR LF+ ++N ASWNA
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRL 120
Query: 356 -----------------------MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
MI CY ++ ++ +F M G+ +EVT+ +++
Sbjct: 121 RNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATII 180
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPM 449
SAC+H G ++ G EI E G + + ++DM + G + ++ + LR+ +
Sbjct: 181 SACAHLGALDLGKEIHLYAME-MGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNL 239
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR--KPDGFVMLSNICA 498
+ NS+ G +HG + A+ M F M KP+G +S + A
Sbjct: 240 FCWNSII----EGLAVHGYAEEALAM---FSRMQREKIKPNGVTFISVLGA 283
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 9/208 (4%)
Query: 19 LLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
++ C AL GK++H A+ DL+++ + S L+ +YA CG ++ + +VF K+
Sbjct: 179 IISACAHLGALDLGKEIHLYAMEMGFDLDVY-IGSALIDMYAKCGSLDKSLVVFFKLRKK 237
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQV 135
N+F N ++ A G +EA+ FS M+ + N TF VL AC +++G K+
Sbjct: 238 NLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRF 297
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSK 194
+++ ++ ++D+ K GLL A + M E + V W +++ G C + +
Sbjct: 298 LSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGG-CKLHR 356
Query: 195 -VDEAVVLFERMKLEGLEPNQFTYNAII 221
+ A V K+ LEPN Y ++
Sbjct: 357 NLKIAQVAVNESKV--LEPNNSGYYTLL 382
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 261/475 (54%), Gaps = 13/475 (2%)
Query: 73 IPNPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+P NV ++W + + ++ N Q A+ ++ M + ++FTF ++KAC L DI
Sbjct: 1 MPERNV--VSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIG 58
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
G+Q+HA + F + NALI MY+K L+ A VF M RD++SW SMI+G+
Sbjct: 59 LGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFS 118
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV 250
+ EA+ F+ M +G P+ +NAIIA +A G+ A FF M DLV
Sbjct: 119 QLGYELEALCYFKEMLHQG-RPDLVAWNAIIAGFAY-GELRDAIFFFEEMRCNA---DLV 173
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
+WNA+++ + + E +L K M +S +P+ +T+T VL A T SI+IG ++H
Sbjct: 174 SWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYA 233
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
+ GL+ D + LID+Y+KCGSLK A +F+ +V SW+++I Y + G + ++
Sbjct: 234 LKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEAL 293
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
+LF+ M ++ N VT + VL+ACSH GLVE+G +++ +M++ +G+ ++EH +C+VD+
Sbjct: 294 KLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDL 353
Query: 431 LCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGF 490
L R+G + EA + Q+ + C HG D+ E ++
Sbjct: 354 LARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAH 413
Query: 491 VMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE----FVEKEVQNE 541
V+L NI A+ G W + LR +MK++ V+K PG S +E ++ FVE + E
Sbjct: 414 VLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPE 468
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 3/184 (1%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +LG ++ ++ G QVH LN S+ + L+ +YA CG + +A +FD +
Sbjct: 210 LTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMI 269
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NP+V + +++ A G +EA+ F MR + N TF VL AC + +++G +
Sbjct: 270 NPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWK 329
Query: 135 VH-AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
++ + + G + ++D+ ++ G L A H M F+ D+V W ++++
Sbjct: 330 LYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTH 389
Query: 193 SKVD 196
VD
Sbjct: 390 GNVD 393
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 173/584 (29%), Positives = 296/584 (50%), Gaps = 63/584 (10%)
Query: 6 FPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTN----------DL-NIFSLKSKLV 54
F IN + +++L L C + L G +HA + N +L N+ + + L+
Sbjct: 40 FAINQVDISFL---LSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLL 96
Query: 55 GVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF---SLMREFIYRC 111
+Y+ CG++ A VFD +P + ++W S GN +G+ L IY+
Sbjct: 97 SMYSRCGELRDATKVFDHMPMKDT--ISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQF 154
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
++ T + VL AC K +H++ G+E +++VGNALI Y +CG S RRVF
Sbjct: 155 DQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVF 214
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------- 217
M E++VV+WT++ISG +E++ LF +M+ ++PN TY
Sbjct: 215 DEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIR 274
Query: 218 ---------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
+A++ Y++ G A+ F +AE D V+ ++
Sbjct: 275 EGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFE--SAEEV--DEVSMTVIL 330
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
G AQ+ E E++++F M+ +G+ + ++ +L G+ S+ +G++IH+L+ +
Sbjct: 331 VGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFG 390
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+ F + LI+MYSKCG L D+ +F +N SWN+MI + +HG +++L+E M
Sbjct: 391 SNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEM 450
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
EG+ +VT +S+L AC+H GLVEKG+ SM + YG+ EHYACVVDM+ R+G
Sbjct: 451 RLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGL 510
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
+ EA + ++P + A C+IHG ++ + F P +++L+NI
Sbjct: 511 LNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANI 570
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQN 540
+++G+W E K MK+ V K+ G S +E +EK++ +
Sbjct: 571 YSSEGKWKERARTIKKMKDMGVTKETGISWIE-----IEKQIHS 609
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/577 (31%), Positives = 287/577 (49%), Gaps = 45/577 (7%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAG 59
M R P+N V L +L C + G VH L+ LN + +L + LV +Y
Sbjct: 211 MMRSGVPVN---VASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGK 267
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
GD+ S+ VF+ + N N + A G ++ + F LM E T S +
Sbjct: 268 FGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSL 327
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
L A V L GK++H + + E+D+ + N L+DMY+K G A +F + R+V
Sbjct: 328 LPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNV 387
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------------- 217
VSW +MI+ EA L M+ G PN FT
Sbjct: 388 VSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAW 447
Query: 218 -------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
NA+I YA+ G N A F R +G V++N +I G++QS+
Sbjct: 448 SIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEKDG-----VSYNTLIVGYSQSQC 502
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
E+L LF+ M ++GI+ + V+ G L A + + G+EIH ++ + L F ++
Sbjct: 503 CFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANS 562
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+D+Y+K G L A +F K+VASWN MI YG HG +D + ELF+ M ++G+ +
Sbjct: 563 LLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYD 622
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
V+ I+VLS CSHGGLV++G + F M + +K + HYAC+VD+L R+G++ E+ +++
Sbjct: 623 HVSYIAVLSVCSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESAEII 681
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
R +P + + GA C IHG +LA E FE+ + +L N+ + G W+
Sbjct: 682 RNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWN 741
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNE 541
EA ++K+MK + VQK P +S V+ N+ V +E
Sbjct: 742 EANGVKKLMKSRKVQKNPAYSWVQSGNKLQAFLVGDE 778
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 178/402 (44%), Gaps = 45/402 (11%)
Query: 47 FSLKSKLVGVYAGCGDVNSARLVFDKIPNP--NVFMLNWMVMASAFTGNFQEAIGYFSLM 104
F L L+ YA D+ SA L+ P + F+ N + A A EA+ ++ M
Sbjct: 47 FPLAGALLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSRALASAALPCEALRVYNRM 106
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIK---KGKQVHAVATQMGFE-NDVSVGNALIDMYSK 160
R + TF L A + + KG ++HA A + G DV GN L+ Y+
Sbjct: 107 VRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFYAV 166
Query: 161 CGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--- 217
CG ARRVF M RDVVSW S++S +++A M G+ N +
Sbjct: 167 CGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPVNVASLVSI 226
Query: 218 --------------------------------NAIIASYARRGDSNAAFAFFSRMTAEGF 245
NA++ Y + GD ++ F+ M +
Sbjct: 227 LPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEK-- 284
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
+ V+WN+ I FA + + L++F+ M + P +VT++ +L A G +G+E
Sbjct: 285 --NEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKE 342
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+H R + D+F + L+DMY+K G + A +FE ++NV SWNAMI ++G
Sbjct: 343 LHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGA 402
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
+ L M + G N TL+++L ACS V+ G +I
Sbjct: 403 EAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQI 444
>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
Length = 829
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/537 (28%), Positives = 273/537 (50%), Gaps = 7/537 (1%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVY 57
RL+ + N + + C+ + A + +GKQ HA+ N L + + L + ++ Y
Sbjct: 255 RLLSAMRNEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFY 314
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
G + A ++FD++ +V N ++ G ++AI LMR + T S
Sbjct: 315 CKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNLNFDCVTLS 374
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
++ A ++K GK+V + GF +D+ + + ++MY+KCG + A++VF+ E+
Sbjct: 375 SLMSAAARTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEK 434
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
D++ W ++++ Y EA+ LF M+LEG+ PN T+N++I S R G N A F
Sbjct: 435 DLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSLLRNGQVNEAKDMF 494
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+M + G P+L++W M++G Q+ EA+ + M SG++ N ++T L A
Sbjct: 495 LQMQSSGISPNLISWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANL 554
Query: 298 GSIQIGREIHALVCRMGLH-IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
S+ GR IH + R H V ++L+DMY+KCG + A +F + +NAM
Sbjct: 555 ASLHFGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAM 614
Query: 357 IGCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
I Y +G V + L+ + E+ G+ + +T+ +VLSAC H G + + + IF M ++
Sbjct: 615 ISAYALYGNVKEATALYRSLDEDVGIEPDNITITNVLSACHHAGDINQAIHIFTDMVSKH 674
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTM 475
+K EHY +VD+L +G +A L+ ++P M + CN + +L +
Sbjct: 675 AMKPCLEHYGLMVDLLASAGETEKALRLIEEMPYKPDARMIQSLLASCNKQHKSELVEYL 734
Query: 476 GEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
E +V +SN+ A +G W E +R++MK K ++K+PG S ++ + E
Sbjct: 735 SRHLLESEPENSGNYVTISNVYAVEGSWDEVGKMREMMKVKGLKKKPGCSWIQIKGE 791
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 225/464 (48%), Gaps = 37/464 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIP 74
+L C+ + L G+Q+HA + N + ++ +++KLV YA C + A+L+F K+
Sbjct: 71 ILQGCVYERDLSTGQQIHARILKNG-DFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLR 129
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NVF ++ G + A+ F M E + F V KAC L + G+
Sbjct: 130 ARNVFSWAAIIGVRCRIGLVEGALMGFVEMLENGLFPDNFVVPNVCKACGALQWSRFGRG 189
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + G + V V ++L DMY KCGLL AR+VF + +R VV+W +++ GY
Sbjct: 190 VHGYVAKAGLHDCVFVASSLADMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGM 249
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFV--- 246
EA+ L M+ EG+EP + T + +++ A G + A A + + + +
Sbjct: 250 NQEAIRLLSAMRNEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTS 309
Query: 247 -----------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
D+VTWN +ISG+ Q +A+ + + M + +
Sbjct: 310 ILNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNLNFD 369
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
VT++ ++ A T ++++G+E+ R G D+ S ++MY+KCGS+ DA+ +F
Sbjct: 370 CVTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFN 429
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
T K++ WN ++ Y + G+ ++ LF M EG+ N +T SV+ + G V +
Sbjct: 430 STVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSLLRNGQVNE 489
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
++F M+ G+ + + +++ L ++G EA LR++
Sbjct: 490 AKDMFLQMQSS-GISPNLISWTTMMNGLVQNGCSEEAIVYLRKM 532
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 187/403 (46%), Gaps = 34/403 (8%)
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
D+ NP V + G +EA+G + M R + +L+ CV D+
Sbjct: 23 DEAGNPPSISYFHRVSSLCKKGEIREALGLVTEMGSRNVRIGPEIYGEILQGCVYERDLS 82
Query: 131 KGKQVHAVATQMG--FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
G+Q+HA + G + + + L+ Y+KC L A+ +F + R+V SW ++I
Sbjct: 83 TGQQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLRARNVFSWAAIIGV 142
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-----YARRGDSNAAF--------- 234
C + V+ A++ F M GL P+ F + + ++R G +
Sbjct: 143 RCRIGLVEGALMGFVEMLENGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDC 202
Query: 235 AFFSRMTAEGF---------------VPD--LVTWNAMISGFAQSKRENEALKLFKGMLV 277
F + A+ + +PD +V WNA++ G+ Q+ EA++L M
Sbjct: 203 VFVASSLADMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRN 262
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
GI+P VTV+ L A G I+ G++ HA+ GL +D G+++++ Y K G ++
Sbjct: 263 EGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEY 322
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A +F+ K+V +WN +I Y + G+V+ +I + + M + + VTL S++SA +
Sbjct: 323 AEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNLNFDCVTLSSLMSAAAR 382
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++ G E+ + R+G + V+M + G +V+A
Sbjct: 383 THNLKLGKEV-QCYCIRHGFVSDIVLASTAVEMYAKCGSIVDA 424
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 167/501 (33%), Positives = 254/501 (50%), Gaps = 51/501 (10%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ ++ Y G++++AR D + V N M+ G F EA+ F M +
Sbjct: 229 TTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQ 288
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHA----VATQMGFENDVSVGNALIDMYSKCGLLCS 166
++FT++ VL AC GKQVHA + + +SV NAL +Y KCG
Sbjct: 289 WDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCG---- 344
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
KVDEA +F +M ++ L ++NAI++ Y
Sbjct: 345 ---------------------------KVDEARQVFNQMPVKDL----VSWNAILSGYVN 373
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G + A +FF M +L+TW MISG AQ+ E+LKLF M G +P +
Sbjct: 374 AGRIDEAKSFFEEMPER----NLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYA 429
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
G + A ++ GR++HA + R+G + G+ALI MY+KCG ++ A LF
Sbjct: 430 FAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMP 489
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+ SWNAMI G+HG ++ELFE ML+E + + +T ++VLS CSH GLVE+G
Sbjct: 490 YLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHR 549
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F+SM YG+ ++HYA ++D+LCR+G+ EA D++ +P+ + A GC IH
Sbjct: 550 YFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIH 609
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
G DL + E FE+ + +V+LSN+ A G W + +RK+M++K V+K+PG S
Sbjct: 610 GNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSW 669
Query: 527 VEKRN--------EFVEKEVQ 539
+E N + V EVQ
Sbjct: 670 IEVENKVHVFLVDDIVHPEVQ 690
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 159/370 (42%), Gaps = 43/370 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-----FSLKSKLVGVYAGCGDVNSARLVFDKI 73
+L C + GKQVHA + + S+ + L +Y CG V+ AR VF+++
Sbjct: 297 VLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQM 356
Query: 74 P-----------------------------NPNVFMLNWMVMASAFTGNF--QEAIGYFS 102
P P +L W VM S N +E++ F+
Sbjct: 357 PVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFN 416
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M+ + + F+ + AC L + G+Q+HA ++GF++ +S GNALI MY+KCG
Sbjct: 417 RMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCG 476
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
++ +A +F M D VSW +MI+ +A+ LFE M E + P++ T+ +++
Sbjct: 477 VVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLS 536
Query: 223 SYARRGDSNAAFAFFSRMTA-EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ + G +F M+ G P + MI ++ + +EA + + M V
Sbjct: 537 TCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGP 596
Query: 282 P-NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P + G G + IQ + L M H + L +MY+ G D
Sbjct: 597 PIWEALLAGCRIHGNMDLGIQAAERLFEL---MPQHDGTYV--LLSNMYATVGRWDDVAK 651
Query: 341 LFEITRIKNV 350
+ ++ R K V
Sbjct: 652 VRKLMRDKGV 661
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 151/347 (43%), Gaps = 57/347 (16%)
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEG 244
+I YC S + A LF+ ++ +P+ +IA+++ G+SN A F T G
Sbjct: 56 LIDVYCKSSDLVSAHHLFDEIR----QPDIVARTTLIAAHSSAGNSNLAREIFF-ATPLG 110
Query: 245 FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG- 303
+ D V +NAMI+G++ + A++LF+ +L +G +P+N T T VL A L +
Sbjct: 111 -IRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQC 169
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKC------------------------------- 332
++IH V + G +AL+ ++ KC
Sbjct: 170 QQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWT 229
Query: 333 ---------GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
G L AR + K V +WNAMI Y HG ++E+F +M G++
Sbjct: 230 TMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQW 289
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSM---KERYGVKISKEHYACVVDMLCRSGRMVEA 440
+E T SVLSAC++ G G ++ + + R + S + + + G++ EA
Sbjct: 290 DEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEA 349
Query: 441 YDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
+ Q+P + N++ + N GR D A + EE E L
Sbjct: 350 RQVFNQMPVKDLVSWNAILSGYVNA----GRIDEAKSFFEEMPERNL 392
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 172/553 (31%), Positives = 272/553 (49%), Gaps = 41/553 (7%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVF 70
SV Y C+L C G Q+H L+ + + + LV +Y+ CG++ AR +F
Sbjct: 213 SVTY-TCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLF 271
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ +P + N ++ G EA F+ M + + TF+ L + + ++
Sbjct: 272 NTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLR 331
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
K+VH+ + DV + +ALID+Y K G + AR++F DV T+MISGY
Sbjct: 332 HCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYV 391
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS--------------------------- 223
+A+ F + EG+ N T +++ +
Sbjct: 392 LHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVN 451
Query: 224 --------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
YA+ G + A+ FF RM+ D V WN+MIS F+Q+ + A+ LF+ M
Sbjct: 452 VGSAITDMYAKCGRLDLAYEFFRRMSDR----DSVCWNSMISSFSQNGKPEIAIDLFRQM 507
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+SG K ++V+++ L A ++ G+E+H V R D F S LIDMYSKCG+L
Sbjct: 508 GMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNL 567
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
A +F + KN SWN++I YG HG ++L+ ML G+ + VT + ++SAC
Sbjct: 568 ALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISAC 627
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
H GLV++G+ F M YG+ EHYAC+VD+ R+GR+ EA+D ++ +P +
Sbjct: 628 GHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGV 687
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
G C +HG +LA E+ + +V+LSN+ A GEW +R +MKE
Sbjct: 688 WGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKE 747
Query: 516 KNVQKQPGFSRVE 528
K VQK PG+S ++
Sbjct: 748 KGVQKIPGYSWID 760
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 245/505 (48%), Gaps = 45/505 (8%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L+ L C + ++Q +QVH + + ++ + S+++G+Y CG A +F ++
Sbjct: 14 LESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELE 73
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NWM+ G F A+ ++ M +K+TF V+KAC GL ++
Sbjct: 74 LRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMV 133
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH A +GF D+ G+ALI +Y+ G + ARRVF + RD + W M+ GY
Sbjct: 134 VHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGD 193
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF--------- 245
D A+ F M+ N TY I++ A RG+ A + GF
Sbjct: 194 FDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANT 253
Query: 246 --------------------VP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+P D VTWN +I+G+ Q+ +EA LF M+ +G+KP+
Sbjct: 254 LVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 313
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+VT L + +GS++ +E+H+ + R + DV+ SALID+Y K G ++ AR +F+
Sbjct: 314 SVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQ 373
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ +VA AMI Y HG+ +I F +++EGM N +T+ SVL AC+ ++
Sbjct: 374 QNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKP 433
Query: 404 GLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAF 459
G E+ +K+R ++ + + DM + GR+ AY+ R++ NSM +F
Sbjct: 434 GKELHCHILKKRLENIVNVG--SAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSF 491
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGL 484
+G+ ++A+ + F +MG+
Sbjct: 492 SQ----NGKPEIAIDL---FRQMGM 509
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 175/371 (47%), Gaps = 39/371 (10%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
S L+ +YA G + AR VFD++P + + N M+ +G+F AIG F MR
Sbjct: 151 SALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSM 210
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N T++ +L C + G Q+H + GFE D V N L+ MYSKCG L AR++
Sbjct: 211 VNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKL 270
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------- 217
F+ M + D V+W +I+GY DEA LF M G++P+ T+
Sbjct: 271 FNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSL 330
Query: 218 ----------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
+A+I Y + GD A F + + D+ AM
Sbjct: 331 RHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQ----QNILVDVAVCTAM 386
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
ISG+ +A+ F+ ++ G+ N++T+ VL A +++ G+E+H + + L
Sbjct: 387 ISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRL 446
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
V GSA+ DMY+KCG L A F ++ WN+MI + ++G + +I+LF +
Sbjct: 447 ENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQ 506
Query: 376 MLEEGMRANEV 386
M G + + V
Sbjct: 507 MGMSGAKFDSV 517
>gi|356545955|ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Glycine max]
Length = 667
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 182/594 (30%), Positives = 290/594 (48%), Gaps = 75/594 (12%)
Query: 20 LGKCMKSKALRQGKQVHA---LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L C + LRQGKQ+HA LL N L SKL+ Y+ + AR VFD P+
Sbjct: 41 LQHCSDHRLLRQGKQLHARLILLSVTPDNF--LASKLILFYSKSNHAHFARKVFDTTPHR 98
Query: 77 NVFMLNWMVMASAFTGNFQEAI---GYFSLMREFIYRCNKFTFSIVLKACV-GLLDIKKG 132
N F N M++ +F F+ A+ G F+ + FT S VLKA +
Sbjct: 99 NTFTWNAMLLGYSFNSMFRHALNLFGSFTFSTTPNASPDNFTISCVLKALASSFCSPELA 158
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC-- 190
K+VH + + G +D+ V NALI Y +C + AR VF GM ERD+V+W +MI GY
Sbjct: 159 KEVHCLILRRGLYSDIFVLNALITCYCRCDEVWLARHVFDGMSERDIVTWNAMIGGYSQR 218
Query: 191 --------------NVSKVDEAVV--------------------LFERMKLEGLEPNQFT 216
NVS V VV L +K G+E +
Sbjct: 219 RLYDECKRLYLEMLNVSAVAPNVVTAVSVMQACGQSMDLAFGMELHRFVKESGIEIDVSL 278
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFV---------------------------PDL 249
NA++A YA+ G + A F M + V P L
Sbjct: 279 SNAVVAMYAKCGRLDYAREMFEGMREKDEVTYGAIISGYMDYGLVDDAMGVFRGVENPGL 338
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
WNA+ISG Q+K+ L + M SG+ PN VT+ +L + +++ G+E+H
Sbjct: 339 NMWNAVISGMVQNKQFEGVFDLVRQMQGSGLSPNAVTLASILPSFSYFSNLRGGKEVHGY 398
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
R G +V+ +++ID Y K G + AR +F++++ +++ W ++I Y HG +
Sbjct: 399 AIRRGYEQNVYVSTSIIDAYGKLGCICGARWVFDLSQSRSLIIWTSIISAYAAHGDAGLA 458
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+ L+ +ML++G+R + VTL SVL+AC+H GLV++ IF SM +YG++ EHYAC+V
Sbjct: 459 LGLYAQMLDKGIRPDPVTLTSVLTACAHSGLVDEAWNIFNSMPSKYGIQPLVEHYACMVG 518
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
+L R+G++ EA + ++P+ + + G +G ++ G ++ + FE+
Sbjct: 519 VLSRAGKLSEAVQFISEMPIEPSAKVWGPLLHGASVFGDVEIGKFACDHLFEIEPENTGN 578
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFVEKEVQN 540
+++++N+ A G+W +A +R+ MK +QK G S +E F+ K+V N
Sbjct: 579 YIIMANLYAHAGKWEQAGEVRERMKVIGLQKIRGSSWIETSGGLLSFIAKDVSN 632
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 203/479 (42%), Gaps = 88/479 (18%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
+ L+ C +++GKQ+HA + D + + LI YSK AR+VF
Sbjct: 36 AYGSALQHCSDHRLLRQGKQLHARLILLSVTPDNFLASKLILFYSKSNHAHFARKVFDTT 95
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKL---EGLEPNQFTYNAIIASYA------ 225
R+ +W +M+ GY S A+ LF P+ FT + ++ + A
Sbjct: 96 PHRNTFTWNAMLLGYSFNSMFRHALNLFGSFTFSTTPNASPDNFTISCVLKALASSFCSP 155
Query: 226 -----------RRGDSNAAF--------------AFFSRMTAEGFVP-DLVTWNAMISGF 259
RRG + F + +R +G D+VTWNAMI G+
Sbjct: 156 ELAKEVHCLILRRGLYSDIFVLNALITCYCRCDEVWLARHVFDGMSERDIVTWNAMIGGY 215
Query: 260 AQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
+Q + +E +L+ ML VS + PN VT V+QA G + + G E+H V G+ ID
Sbjct: 216 SQRRLYDECKRLYLEMLNVSAVAPNVVTAVSVMQACGQSMDLAFGMELHRFVKESGIEID 275
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI-------- 370
V +A++ MY+KCG L AR +FE R K+ ++ A+I Y +G+VD ++
Sbjct: 276 VSLSNAVVAMYAKCGRLDYAREMFEGMREKDEVTYGAIISGYMDYGLVDDAMGVFRGVEN 335
Query: 371 -----------------------ELFERMLEEGMRANEVTLISVLSACSH-----GGLVE 402
+L +M G+ N VTL S+L + S+ GG
Sbjct: 336 PGLNMWNAVISGMVQNKQFEGVFDLVRQMQGSGLSPNAVTLASILPSFSYFSNLRGGKEV 395
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
G I R ++ V S ++D + G + A +DL + + + S+ A+
Sbjct: 396 HGYAIRRGYEQNVYVSTS------IIDAYGKLGCICGARWVFDLSQSRSLIIWTSIISAY 449
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICAADGEWHEAENLRKIMKEK 516
HG LA+ + + + G+R PD + S CA G EA N+ M K
Sbjct: 450 A----AHGDAGLALGLYAQMLDKGIR-PDPVTLTSVLTACAHSGLVDEAWNIFNSMPSK 503
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/524 (32%), Positives = 278/524 (53%), Gaps = 38/524 (7%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
L + L+ +Y CG + A VFD++ NV ++ GN E++ FS M
Sbjct: 9 LSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSG 68
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ N FTFS LKAC L + G+Q+H + + GF+ VGN++IDMYSKCG + A
Sbjct: 69 VKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAA 128
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
+F M R+++SW +MI+GY ++A+VLF++M+ G ++FT+ + + + + G
Sbjct: 129 CMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLG 188
Query: 229 ---DSNAAFAF-------FSRMTA-EGFVPDL----------------------VTWNAM 255
+ N AF +S TA G + DL ++W A+
Sbjct: 189 AIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTAL 248
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
I G+AQ E+++LF+ + S I+ + ++ ++ +Q G+++HA ++
Sbjct: 249 ILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPS 308
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+D+ ++++DMY KCG + +A LF +NV SW MI YGKHG+ +I LF+
Sbjct: 309 GVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDE 368
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M + ++VT ++VL CSH GLVEKG E F + +G+K EHYAC+VD+L R+G
Sbjct: 369 MQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAG 428
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
R+ EA +L+ +P+ + + C +HG +L +G + P +VM+SN
Sbjct: 429 RLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSN 488
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQ 539
I A G W E E +R+++K K ++K+ G S VE ++KEV
Sbjct: 489 IYADAGYWKECERIRELVKSKKLKKEAGRSWVE-----IDKEVH 527
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 188/393 (47%), Gaps = 50/393 (12%)
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
MGF D+ + N LI MY KCG L A VF M +R+VVSWT+++ G+ E+++L
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60
Query: 202 FERMKLEGLEPNQFTY-----------------------------------NAIIASYAR 226
F +M L G++PN FT+ N+II Y++
Sbjct: 61 FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G N A F M V +L++WNAMI+G+ + +AL LF+ M G + T
Sbjct: 121 CGRINEAACMFEVMP----VRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFT 176
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT--GSALIDMYSKCGSLKDARTLFEI 344
T L+A G+I+ G +IHA + G V T ALID+Y KCG L AR +F
Sbjct: 177 FTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSH 236
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
K+V SW A+I Y + G + S+ELF ++ E ++ + L S++ + LV++G
Sbjct: 237 IEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQG 296
Query: 405 LEIFR-SMKERYGVKISKEHYAC--VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
++ ++K GV IS C ++DM + G + EA L ++P S
Sbjct: 297 KQMHAFAIKVPSGVDIS----VCNSILDMYLKCGMINEAERLFSEMPARNVISWT-VMIT 351
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
G HG A+ + +E ++ +PD L+
Sbjct: 352 GYGKHGLGKEAIRLFDE-MQLDSTEPDDVTYLA 383
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 168/336 (50%), Gaps = 10/336 (2%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVG----VYAGCGDVNSARLVFDKIPN 75
L C A+++G Q+HA L T ++S+ + + G +Y CG + AR VF I
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGF-LYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEE 239
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V +++ A GN E++ F +RE + + F S ++ +++GKQ+
Sbjct: 240 KHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQM 299
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA A ++ D+SV N+++DMY KCG++ A R+F M R+V+SWT MI+GY
Sbjct: 300 HAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLG 359
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA-EGFVPDLVTWNA 254
EA+ LF+ M+L+ EP+ TY A++ + G +FSR+ + G + +
Sbjct: 360 KEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYAC 419
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M+ ++ R EA L M ++ N +L A + G +++G+E+ ++ R+
Sbjct: 420 MVDLLGRAGRLKEAKNLVDSM---PLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLD 476
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
V + ++Y+ G K+ + E+ + K +
Sbjct: 477 SENPV-NYVMMSNIYADAGYWKECERIRELVKSKKL 511
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 174/516 (33%), Positives = 270/516 (52%), Gaps = 25/516 (4%)
Query: 27 KALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNS---ARLVF-----DKIPNPN 77
K L Q KQ+H + N L+ I S +KLV A S AR F D +
Sbjct: 36 KTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDA 95
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+FMLN ++ + G +EAI + M N +TF VL C + +G QVH
Sbjct: 96 LFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHG 155
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+MG E DV + N LI Y++CG + +VF GM ER+VVSWTS+I GY + E
Sbjct: 156 SVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKE 215
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
AV LF M N+ NA++ Y + G +AA R+ E +LV +N ++S
Sbjct: 216 AVSLFFEML------NKVMVNALVDMYMKCGAIDAA----KRLFDECVDRNLVLYNTILS 265
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG-----LTGSIQIGREIHALVCR 312
+A+ EAL + ML G +P+ VT+ + A G + G +H + +
Sbjct: 266 NYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEK 325
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
G+ D+ +AL+DM+++CG + A +F ++V++W A IG G + + L
Sbjct: 326 NGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGL 385
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F +ML +G++ + V + VL+ACSHGG VE+GL IF S+ E +G+ EHY C+VD+L
Sbjct: 386 FNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLG 444
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
R+G + EA+DL++ +PM + + G+ C +H ++A E E+ ++ V+
Sbjct: 445 RAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVL 504
Query: 493 LSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
LSNI A+ G+W + +R ++EK V+K PG S V+
Sbjct: 505 LSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQ 540
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 275/523 (52%), Gaps = 47/523 (8%)
Query: 11 LSV-NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
LSV N L L KC +A ++V L D + + + +VG Y GDVN+AR V
Sbjct: 198 LSVSNALIALYMKCDTPEASWDARKV--LDEMPDKDDLTWTTMVVG-YVRRGDVNAARSV 254
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
F+++ + N M+ +G +A F M ++FTF+ VL AC
Sbjct: 255 FEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFF 314
Query: 130 KKGKQVHA--VATQMGF--ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
GK VH + Q F E + V NAL+ +YSK G + A+R+F M +DVVSW ++
Sbjct: 315 VHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTI 374
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
+SGY + +D+AV +F+ M +
Sbjct: 375 LSGYIDSGCLDKAVEVFKVMPYKN------------------------------------ 398
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
DL +W M+SG+ +ALKLF M +KP + T G + A G G+++ GR+
Sbjct: 399 --DL-SWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQ 455
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+HA + + G G+AL+ MY+KCG++ DAR +F + + SWNAMI G+HG
Sbjct: 456 LHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGH 515
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
++ELF++M+ EG+ + ++ +++L+AC+H GLV++G F SMK +G+ ++HYA
Sbjct: 516 GREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA 575
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
++D+L RSGR+ EA DL++ +P T S+ A +GC +G + ++ F M +
Sbjct: 576 RLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQ 635
Query: 486 KPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+++LSN +A G W +A +RK+M+++ V+K+PG S +E
Sbjct: 636 HDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIE 678
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 171/373 (45%), Gaps = 47/373 (12%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNP--NVFMLNWMVMASAFTGNFQEAIGYF-SLM 104
S + LV A G + A FD +P + + N M+ A A A+ F +L+
Sbjct: 93 SPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALL 152
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGK--QVHAVATQMGFENDVSVGNALIDMYSKCG 162
R + ++F+ ++ A + ++ Q+H + G +SV NALI +Y KC
Sbjct: 153 GSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCD 212
Query: 163 LL---CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNA 219
AR+V M ++D ++WT+M+ GY V+ A +FE + + +NA
Sbjct: 213 TPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGK----FDVVWNA 268
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+I+ Y + G AF F RM +E D T+ +++S A + G V G
Sbjct: 269 MISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANA-----------GFFVHG 317
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+V G QI R V L ++ +AL+ +YSK G + A+
Sbjct: 318 -----KSVHG-----------QIIRLQPNFVPEAALPVN----NALVTLYSKGGKIVIAK 357
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ +K+V SWN ++ Y G +D ++E+F+ M + N+++ + ++S HGG
Sbjct: 358 RIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVHGG 413
Query: 400 LVEKGLEIFRSMK 412
L E L++F M+
Sbjct: 414 LSEDALKLFNQMR 426
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 186/592 (31%), Positives = 284/592 (47%), Gaps = 79/592 (13%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYA--GCGDVNS 65
NN + L+ +C +LRQ KQ HA ++ T + SKL + A +
Sbjct: 27 NNERSRHTISLIDRC---SSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEY 83
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC--NKFTFSIVLKAC 123
AR VFD+IP PN F N ++ A A + +I F M +C NK+TF ++KA
Sbjct: 84 ARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAA 143
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+ + G+ +H +A + +DV V N+LI Y CG L SA +VF + E+DVVSW
Sbjct: 144 AEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWN 203
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------- 217
SMI+G+ D+A+ LF++M+ E ++ + T
Sbjct: 204 SMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEEN 263
Query: 218 ---------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW---------------- 252
NA++ Y + G A F M + D VTW
Sbjct: 264 RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK----DNVTWTTMLDGYAISEDYEAA 319
Query: 253 ---------------NAMISGFAQSKRENEALKLFKGM-LVSGIKPNNVTVTGVLQAGGL 296
NA+IS + Q+ + NEAL +F + L IK N +T+ L A
Sbjct: 320 REVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQ 379
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
G++++GR IH+ + + G+ ++ + SALI MYSKCG L+ AR +F ++V W+AM
Sbjct: 380 VGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAM 439
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
IG HG ++++F +M E ++ N VT +V ACSH GLV++ +F M+ YG
Sbjct: 440 IGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYG 499
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
+ +HYAC+VD+L RSG + +A + +P+ + S+ GA C IH LA
Sbjct: 500 IVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMAC 559
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
E+ R V+LSNI A G+W LRK M+ ++K+PG S +E
Sbjct: 560 TRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIE 611
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 182/610 (29%), Positives = 296/610 (48%), Gaps = 87/610 (14%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAG 59
M+ L + +N + ++ C + ++R G+ HAL L T ++ + + LV +Y+
Sbjct: 118 MHSLSWTPDNYTFPFV---FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR 174
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM-REFIYRCNKFTFSI 118
C ++ AR VFD++ +V N ++ + A G + A+ FS M EF R + T
Sbjct: 175 CRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVN 234
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
VL C L GKQ+H A ++ VGN L+DMY+KCG++ A VF M +D
Sbjct: 235 VLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294
Query: 179 VVSWTSMISGYCNVSKVD-----------------------------------EAVVLFE 203
VVSW +M++GY + + + EA+ +
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 204 RMKLEGLEPNQFTY------------------------------------------NAII 221
+M G++PN+ T N +I
Sbjct: 355 QMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLI 414
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-- 279
YA+ + A A F ++ + D+VTW MI G++Q N+AL+L M
Sbjct: 415 DMYAKCKKVDTARAMFDSLSPKE--RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH-IDVFTGSALIDMYSKCGSLKDA 338
+PN T++ L A +++IG++IHA R + + +F + LIDMY+KCGS+ DA
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA 532
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
R +F+ KN +W +++ YG HG + ++ +F+ M G + + VTL+ VL ACSH
Sbjct: 533 RLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHS 592
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
G++++G+E F MK +GV EHYAC+VD+L R+GR+ A L+ ++PM + A
Sbjct: 593 GMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVA 652
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
F + C IHG+ +L E+ E+ + +LSN+ A G W + +R +M+ K V
Sbjct: 653 FLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGV 712
Query: 519 QKQPGFSRVE 528
+K+PG S VE
Sbjct: 713 KKRPGCSWVE 722
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 152/553 (27%), Positives = 242/553 (43%), Gaps = 90/553 (16%)
Query: 25 KSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
K K + Q K +H L + + +L S L+ Y G ++ A + + P + + +W
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 85 VMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
+ ++ N + + F LM + + +TF V KAC + ++ G+ HA++
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
GF ++V VGNAL+ MYS+C L AR+VF M DVVSW S+I Y + K A+ +F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 203 ERMKLE-GLEP-----------------------------------NQFTYNAIIASYAR 226
RM E G P N F N ++ YA+
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 227 RG---DSNAAFA----------------------------FFSRMTAEGFVPDLVTWNAM 255
G ++N F+ F +M E D+VTW+A
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
ISG+AQ EAL + + ML SGIKPN VT+ VL G++ G+EIH + +
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 316 HI-------DVFTGSALIDMYSKCGSLKDARTLFEITRIK--NVASWNAMIGCYGKHGMV 366
+ + + LIDMY+KC + AR +F+ K +V +W MIG Y +HG
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 367 DSSIELFERMLEEG--MRANEVTLISVLSACSHGGLVEKGLEI----FRSMKERYGVKIS 420
+ ++EL M EE R N T+ L AC+ + G +I R+ + + +S
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS 516
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF 480
C++DM + G + +A + + M + G +HG + A+ + +E
Sbjct: 517 N----CLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 571
Query: 481 EMGLRKPDGFVML 493
+G K DG +L
Sbjct: 572 RIGF-KLDGVTLL 583
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 173/554 (31%), Positives = 280/554 (50%), Gaps = 75/554 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIP 74
L ++ C AL+ GKQ+H + L + S+ S L+ +Y + AR VFDK+P
Sbjct: 77 LPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLP 136
Query: 75 NPNVF---------------------------------MLNWMVMASAF--TGNFQEAIG 99
P V +++W M S F +G++ +A+
Sbjct: 137 QPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVL 196
Query: 100 YFSLMREFIYRCNKFTFSIVLKACVGLLDIK-KGKQVHAVATQMGFENDVSVGNALIDMY 158
F M + + + S VL A VG LD+ G Q+H + G D V +ALIDMY
Sbjct: 197 MFQNMHLEGLKPDGTSVSSVLPA-VGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMY 255
Query: 159 SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYN 218
KC VF+ M E DV + ++++G VD A+ +F+ + +G++ N
Sbjct: 256 GKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFK--QFKGMDLN----- 308
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+V+W +MI+ +Q+ ++ EAL+LF+ M +
Sbjct: 309 ------------------------------VVSWTSMIASCSQNGKDMEALELFREMQIE 338
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G+KPN+VT+ +L A G ++ G+ H R G+ DV+ GSALIDMY+KCG + +
Sbjct: 339 GVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLAS 398
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
R F++ +N+ SWN+++ Y HG +I +FE M G + + V+ VLSAC+ G
Sbjct: 399 RLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQG 458
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GL E+G F SM +GV+ EHY+C+V +L RSGR+ EAY +++Q+P + + GA
Sbjct: 459 GLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGA 518
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
+ C +H R DL + FE+ R P +++LSNI A+ W E + +R +M+ + +
Sbjct: 519 LLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGL 578
Query: 519 QKQPGFSRVEKRNE 532
+K PG+S +E +N+
Sbjct: 579 KKNPGYSWIEIKNK 592
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 155/336 (46%), Gaps = 38/336 (11%)
Query: 93 NFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGN 152
+F I FS M + V+K C L ++ GKQ+H A G D V +
Sbjct: 54 HFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLS 113
Query: 153 ALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEP 212
+L+ MY + L AR VF + + VV+ +++IS + +V E LF + + G+E
Sbjct: 114 SLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVEL 173
Query: 213 NQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLF 272
N ++N +I+ + R G A F M EG
Sbjct: 174 NLVSWNGMISGFNRSGSYLDAVLMFQNMHLEG---------------------------- 205
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
+KP+ +V+ VL A G +G +IH V + GL D F SALIDMY KC
Sbjct: 206 -------LKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKC 258
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
+ +F +V + NA++ ++G+VD+++E+F++ +GM N V+ S++
Sbjct: 259 ACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQF--KGMDLNVVSWTSMI 316
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
++CS G + LE+FR M+ GVK + C++
Sbjct: 317 ASCSQNGKDMEALELFREMQIE-GVKPNSVTIPCLL 351
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 168/484 (34%), Positives = 260/484 (53%), Gaps = 19/484 (3%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ LV Y + AR +FD +P NV N M+ A G +A+ F M E
Sbjct: 133 TALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPER--- 189
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N +++ V+ A + ++ + + +M E DV ++ SK G + AR +
Sbjct: 190 -NVVSWNTVITA---FMQRRRVDEAQELFNRMP-ERDVISWTTMVAGLSKNGRIDDARLL 244
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M R+VVSW +MI GY ++DEA LFE+M L ++N +I + + G
Sbjct: 245 FDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELS----SWNTMITGFIQNGKL 300
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTG 289
A FF +M+ + ++VTW A+ISG Q R EALK+F M + +KPN T
Sbjct: 301 ERAVDFFYKMSNK----NVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVS 356
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI-- 347
VL A ++ G++IH ++ + SALI+MYSKCG L+ AR +F+ I
Sbjct: 357 VLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGH 416
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
++V SWN MI Y HG +I LF+ M G R + VT I++LSACSH GLV++GL++
Sbjct: 417 RDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKL 476
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
F ++ +K+ ++H+ C+VD+ R+GR+ EA+D ++ + + + S+ A GCN+HG
Sbjct: 477 FENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHG 536
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
DL E+ E +++LSNI A+ G+W EA +R MK+K ++KQPG S +
Sbjct: 537 HIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWI 596
Query: 528 EKRN 531
E N
Sbjct: 597 EVGN 600
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 158/350 (45%), Gaps = 42/350 (12%)
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
++V+ N LI K G + AR+VF M +RDVVSWT++I+GY ++EA LF+R
Sbjct: 64 SNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDR- 122
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
N T+ A+++ Y R A F M V ++++WN MI G+A+
Sbjct: 123 --NDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMP----VKNVISWNTMIEGYARKGWI 176
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
++AL LF+ M + N +T +Q + E L RM DV + + +
Sbjct: 177 DQALDLFEKMPERNVVSWNTVITAFMQRRRVD-------EAQELFNRMPER-DVISWTTM 228
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA-- 383
+ SK G + DAR LF+ ++NV SWN MI Y ++ +D + +LFE+M E + +
Sbjct: 229 VAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWN 288
Query: 384 -------------------------NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
N VT +V+S G E+ L+IF M+ VK
Sbjct: 289 TMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVK 348
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
++ + V+ + + E + + + V +A N++ +
Sbjct: 349 PNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 398
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 28/243 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFD--KIPN 75
+LG C K AL +G+Q+H ++ T + + S L+ +Y+ CG++ AR +FD I +
Sbjct: 357 VLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGH 416
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGK 133
+V N M+ A A G+ +AI F M+ +R + T+ +L AC GL+D +G
Sbjct: 417 RDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVD--EGL 474
Query: 134 QVHAVATQMGFEN---DVSVG------NALIDMYSKCGLLCSARRVFHGMFERDVVS-WT 183
++ FEN D S+ L+D++ + G L A G+ + S W
Sbjct: 475 KL--------FENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWA 526
Query: 184 SMISGYCNV-SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA 242
++++G CNV +D + E++ LE N TY + YA G A +M
Sbjct: 527 ALLAG-CNVHGHIDLGKLTAEKL-LETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKD 584
Query: 243 EGF 245
+G
Sbjct: 585 KGL 587
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 37/194 (19%)
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY 360
Q+ +I + V + +V + LI K G + +AR +FE ++V SW A+I Y
Sbjct: 48 QVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGY 107
Query: 361 GKHGMVDSSIELFER---------------------MLEEGMR-------ANEVTLISVL 392
K GM++ + LF+R +EE R N ++ +++
Sbjct: 108 IKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMI 167
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---- 448
+ G +++ L++F M ER V + V+ + R+ EA +L ++P
Sbjct: 168 EGYARKGWIDQALDLFEKMPERNVVS-----WNTVITAFMQRRRVDEAQELFNRMPERDV 222
Query: 449 MYVTNSMAGAFRNG 462
+ T +AG +NG
Sbjct: 223 ISWTTMVAGLSKNG 236
>gi|356528072|ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 647
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 171/554 (30%), Positives = 288/554 (51%), Gaps = 68/554 (12%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
C S+ + +G+++ L+ D ++ ++ YA G ++ A +F+ +P N N
Sbjct: 114 CRGSRFVEEGRRLFELMPQRDCVSWN---TVISGYAKNGRMDQALKLFNAMPERNAVSSN 170
Query: 83 WMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV------GLLDIKKG---- 132
++ G+ A+ +F M E +S L A + G LD+ G
Sbjct: 171 ALITGFLLNGDVDSAVDFFRTMPEH--------YSTSLSALISGLVRNGELDMAAGILCE 222
Query: 133 ------KQVHAVAT-------------------------------QMGFENDVSVGNALI 155
VHA T Q F +V N+++
Sbjct: 223 CGNGDDDLVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMM 282
Query: 156 DMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF 215
Y K G + SAR +F M E+D SW +MISGY +S ++EA LF M + P+
Sbjct: 283 MCYVKAGDIVSARELFDRMVEQDTCSWNTMISGYVQISNMEEASKLFREMPI----PDVL 338
Query: 216 TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
++N I++ +A++GD N A FF RM + +L++WN++I+G+ +++ A++LF M
Sbjct: 339 SWNLIVSGFAQKGDLNLAKDFFERMP----LKNLISWNSIIAGYEKNEDYKGAIQLFSRM 394
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
G +P+ T++ V+ ++ +G++IH LV ++ + D ++LI MYS+CG++
Sbjct: 395 QFEGERPDRHTLSSVMSVCTGLVNLYLGKQIHQLVTKIVIP-DSPINNSLITMYSRCGAI 453
Query: 336 KDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
DA T+F EI K+V +WNAMIG Y HG+ ++ELF+ M + +T ISV++A
Sbjct: 454 VDACTVFNEIKLYKDVITWNAMIGGYASHGLAAEALELFKLMKRLKIHPTYITFISVMNA 513
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS 454
C+H GLVE+G F+SM YG++ EH+A +VD+L R G++ EA DL+ +P +
Sbjct: 514 CAHAGLVEEGRRQFKSMINDYGIERRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKA 573
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMK 514
+ GA + C +H +LA+ + + +V+L NI A G+W +AE++R +M+
Sbjct: 574 VWGALLSACRVHNNVELALVAADALIRLEPESSAPYVLLYNIYANLGQWDDAESVRVLME 633
Query: 515 EKNVQKQPGFSRVE 528
EKNV+KQ G+S V+
Sbjct: 634 EKNVKKQAGYSWVD 647
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 147/326 (45%), Gaps = 67/326 (20%)
Query: 136 HAVATQMGFENDVSV---GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
HA A+ N+ S N I + G L AR +F M RD V+W SMI+GY +
Sbjct: 24 HASASPTHKYNNSSPLNRSNKKISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHR 83
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASY-ARRGDSNAAFAFFSRMTAEG-----FV 246
++ A LF+ M + ++N I++ Y + RG SR EG +
Sbjct: 84 REIARARQLFDEMPRRDV----VSWNLIVSGYFSCRG---------SRFVEEGRRLFELM 130
Query: 247 P--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
P D V+WN +ISG+A++ R ++ALKLF M +N +TG L G + ++ R
Sbjct: 131 PQRDCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSSNALITGFLLNGDVDSAVDFFR 190
Query: 305 EIH------------------------ALVCRMGLHID--VFTGSALIDMYSKCGSLKDA 338
+ ++C G D V + LI Y + G +++A
Sbjct: 191 TMPEHYSTSLSALISGLVRNGELDMAAGILCECGNGDDDLVHAYNTLIAGYGQRGHVEEA 250
Query: 339 RTLFEITRI-------------KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
R LF+ +NV SWN+M+ CY K G + S+ ELF+RM+E+ +
Sbjct: 251 RRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAGDIVSARELFDRMVEQDT-CSW 309
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSM 411
T+IS S+ +E+ ++FR M
Sbjct: 310 NTMISGYVQISN---MEEASKLFREM 332
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 49/227 (21%)
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
N I++ R G + A A F M D VTWN+MI+G+ + A +LF M
Sbjct: 43 NKKISNLIRSGRLSEARALFDSMKHR----DTVTWNSMITGYVHRREIARARQLFDEMPR 98
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
+ N+ V+G CR GS ++ +
Sbjct: 99 RDVVSWNLIVSGYFS------------------CR---------GSRFVE---------E 122
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
R LFE+ ++ SWN +I Y K+G +D +++LF M E N V+ ++++
Sbjct: 123 GRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPER----NAVSSNALITGFLL 178
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
G V+ ++ FR+M E Y +S ++ L R+G + A +L
Sbjct: 179 NGDVDSAVDFFRTMPEHYSTSLS-----ALISGLVRNGELDMAAGIL 220
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 9/224 (4%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP- 74
L ++ C L GKQ+H L+ + + + L+ +Y+ CG + A VF++I
Sbjct: 406 LSSVMSVCTGLVNLYLGKQIHQLVTKIVIPDSPINNSLITMYSRCGAIVDACTVFNEIKL 465
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-K 133
+V N M+ A G EA+ F LM+ TF V+ AC +++G +
Sbjct: 466 YKDVITWNAMIGGYASHGLAAEALELFKLMKRLKIHPTYITFISVMNACAHAGLVEEGRR 525
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
Q ++ G E V +L+D+ + G L A + + M F+ D W +++S C V
Sbjct: 526 QFKSMINDYGIERRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLSA-CRV 584
Query: 193 -SKVDEAVVLFE---RMKLEGLEPNQFTYNAIIASYARRGDSNA 232
+ V+ A+V + R++ E P YN I A+ + D+ +
Sbjct: 585 HNNVELALVAADALIRLEPESSAPYVLLYN-IYANLGQWDDAES 627
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 275/523 (52%), Gaps = 47/523 (8%)
Query: 11 LSV-NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
LSV N L L KC +A ++V L D + + + +VG Y GDVN+AR V
Sbjct: 200 LSVSNALIALYMKCDTPEASWDARKV--LDEMPDKDDLTWTTMVVG-YVRRGDVNAARSV 256
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
F+++ + N M+ +G +A F M ++FTF+ VL AC
Sbjct: 257 FEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFF 316
Query: 130 KKGKQVHA--VATQMGF--ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
GK VH + Q F E + V NAL+ +YSK G + A+R+F M +DVVSW ++
Sbjct: 317 VHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTI 376
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
+SGY + +D+AV +F+ M +
Sbjct: 377 LSGYIDSGCLDKAVEVFKVMPYKN------------------------------------ 400
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
DL +W M+SG+ +ALKLF M +KP + T G + A G G+++ GR+
Sbjct: 401 --DL-SWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQ 457
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+HA + + G G+AL+ MY+KCG++ DAR +F + + SWNAMI G+HG
Sbjct: 458 LHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGH 517
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
++ELF++M+ EG+ + ++ +++L+AC+H GLV++G F SMK +G+ ++HYA
Sbjct: 518 GREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA 577
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
++D+L RSGR+ EA DL++ +P T S+ A +GC +G + ++ F M +
Sbjct: 578 RLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQ 637
Query: 486 KPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+++LSN +A G W +A +RK+M+++ V+K+PG S +E
Sbjct: 638 HDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIE 680
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 187/433 (43%), Gaps = 82/433 (18%)
Query: 23 CMKSKALRQGKQVHALLCTNDL----NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
C S LR + +HA L T DL + L +L+ +Y D+ + +F P+P
Sbjct: 35 CPSSSFLRALRCLHARLLTADLLHAPSHPHLTLRLIHLYTLSPDLATPAALFRSDPDPGP 94
Query: 79 FMLNWMVMASAFTGNFQEAIGYF--------------SLMREFI---------------- 108
+V A A G ++A +F ++M F
Sbjct: 95 VAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALL 154
Query: 109 ----YRCNKFTFSIVLKACVGLLDIKKGK--QVHAVATQMGFENDVSVGNALIDMYSKCG 162
R + ++F+ ++ A + ++ Q+H + G +SV NALI +Y KC
Sbjct: 155 GSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCD 214
Query: 163 LL---CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNA 219
AR+V M ++D ++WT+M+ GY V+ A +FE + + +NA
Sbjct: 215 TPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGK----FDVVWNA 270
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+I+ Y + G AF F RM +E D T+ +++S A + G V G
Sbjct: 271 MISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANA-----------GFFVHG 319
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+V G QI R V L ++ +AL+ +YSK G + A+
Sbjct: 320 -----KSVHG-----------QIIRLQPNFVPEAALPVN----NALVTLYSKGGKIVIAK 359
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ +K+V SWN ++ Y G +D ++E+F+ M + N+++ + ++S HGG
Sbjct: 360 RIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVHGG 415
Query: 400 LVEKGLEIFRSMK 412
L E L++F M+
Sbjct: 416 LSEDALKLFNQMR 428
>gi|225424928|ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
[Vitis vinifera]
gi|296086418|emb|CBI32007.3| unnamed protein product [Vitis vinifera]
Length = 617
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 255/487 (52%), Gaps = 48/487 (9%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGY--FSLMRE 106
+ + +V +Y+ CG++ A+ VFD+I + NV N + +G Q + F + ++
Sbjct: 168 VATAVVTMYSNCGELVLAKKVFDQILDKNVVSYNAFI-----SGLLQNGAPHLVFDVFKD 222
Query: 107 FIYRC----NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
+ N T +L AC LL I+ G+Q+H + ++ D VG AL+DMYSKCG
Sbjct: 223 LLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCG 282
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
A +F ++L G N T+N++IA
Sbjct: 283 CWHWAYGIF---------------------------------IELSG-SRNLVTWNSMIA 308
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
G S+ A F ++ EG PD TWN MISGF+Q + EA K F M +G+
Sbjct: 309 GMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIA 368
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ ++T +L+A ++Q G+EIH R + D F +ALIDMY KCG AR +F
Sbjct: 369 SLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVF 428
Query: 343 EITRIK--NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+IK + A WNAMI YG++G S+ E+F +M EE ++ N TL+S+LS CSH G
Sbjct: 429 CQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGE 488
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
+++G ++F+ M YG+ + EH+ C+VD+L RSGR+ EA +L+ ++P + S+ +
Sbjct: 489 IDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMP-EASVSVFASLL 547
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
C H L M ++ E+ + P FV+LSNI A G W + E +R++M ++ ++K
Sbjct: 548 GACRHHSDSALGEEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDVERVREMMNDRGLKK 607
Query: 521 QPGFSRV 527
PG S +
Sbjct: 608 PPGCSSI 614
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 171/355 (48%), Gaps = 38/355 (10%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G ++EA+ +S + +KFTF +LKA L +G+ +H + GF D+
Sbjct: 12 GFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAA 71
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
AL DMY K LL A +VF M R++ S ISG+ EA+ F+++ L
Sbjct: 72 TALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFR 131
Query: 212 PNQFTY--------------------------------NAIIASYARRGDSNAAFAFFSR 239
PN T A++ Y+ G+ A F +
Sbjct: 132 PNSVTIASVLPACASVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQ 191
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTG 298
+ + ++V++NA ISG Q+ + +FK +L SG PN+VT+ +L A
Sbjct: 192 ILDK----NVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLL 247
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMI 357
I+ GR+IH LV ++ ++ D G+AL+DMYSKCG A +F E++ +N+ +WN+MI
Sbjct: 248 YIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMI 307
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
+G D ++ELFE++ EG+ + T +++S S G V + + F M+
Sbjct: 308 AGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQ 362
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 5/232 (2%)
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
EAL L+ + S + + T +L+A S G+ +H + + G H+D++ +AL
Sbjct: 16 EALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAATALA 75
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
DMY K L A +FE +N+ S N I + ++G ++ F+++ R N V
Sbjct: 76 DMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSV 135
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T+ SVL AC+ VE ++ + + GV+ VV M G +V A + Q
Sbjct: 136 TIASVLPACAS---VELDGQV-HCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQ 191
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+ S AF +G +G L + ++ E P+ ++S + A
Sbjct: 192 ILDKNVVSY-NAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSA 242
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHA-LLCTN-DLNIFSLKSKLVGVYAGCGDVNSARLV 69
S+ + LL C AL+ GK++H + TN D + F + + L+ +Y CG AR V
Sbjct: 369 SLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEF-ISTALIDMYMKCGHSYLARRV 427
Query: 70 FDKI---PNPNVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
F + P+ F W M S + G +Q A F+ M+E + N T +L C
Sbjct: 428 FCQFQIKPDDPAF---WNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCS 484
Query: 125 GLLDIKKGKQVHAVATQ-MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+I +G Q+ + + G ++D+ + G L A+ + H M E V +
Sbjct: 485 HTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMPEASVSVFA 544
Query: 184 SMISGYCNVSKVDEAVVLFERM--KLEGLEPNQFTYNAIIAS-YARRG 228
S++ G C D A L E M KL LEP T I+++ YA +G
Sbjct: 545 SLL-GACR-HHSDSA--LGEEMAKKLSELEPQDPTPFVILSNIYAVQG 588
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 158/515 (30%), Positives = 271/515 (52%), Gaps = 41/515 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C + +L GKQ+HA + + I + S L+ +YA CG A+ VF+ + + N
Sbjct: 267 LTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNS 326
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
++ S F +++ F+ MR + ++F + ++ C +D+ G+Q+H++
Sbjct: 327 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 386
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ G + V N+LI +Y+KCG L +A VF M ERD+VSWTSMI+
Sbjct: 387 CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT----------- 435
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
+Y++ G+ A FF M + +TWNAM+
Sbjct: 436 ------------------------AYSQIGNIIKAREFFDGMATR----NAITWNAMLGA 467
Query: 259 FAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
+ Q E + LK++ ML + P+ VT + + G+ ++G +I + GL +
Sbjct: 468 YIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLIL 527
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
+V +A I MYSKCG + +A+ LF++ K+V SWNAMI Y +HGM + + F+ ML
Sbjct: 528 NVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML 587
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
+G + + ++ ++VLS CSH GLV++G F M +G+ EH++C+VD+L R+G +
Sbjct: 588 SKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHL 647
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
EA DL+ ++PM T + GA + C IHG +LA + FE+ +++L+ I
Sbjct: 648 TEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIY 707
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ G+ ++ +RK+M++K ++K PG+S +E N+
Sbjct: 708 SDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENK 742
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 169/384 (44%), Gaps = 47/384 (12%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSAR-LVFDKIPNPN 77
L C AL + +H L T L + L++ L+ Y CG ++ AR L+ I PN
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLM-REFIYRCNKFTFSIVLKA-----CVGLLDIKK 131
V N M+ A G+ +A F M R + N A C L +
Sbjct: 87 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCREL 146
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
Q+ + + F D V AL+DM+ +CG + A R+F ER
Sbjct: 147 APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF-SQIER-------------- 191
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
P F N+++A YA+ + A +F M D+V+
Sbjct: 192 --------------------PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAER----DVVS 227
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
WN MI+ +QS R EAL L M G++ ++ T T L A S+ G+++HA V
Sbjct: 228 WNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVI 287
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
R ID + SALI++Y+KCGS K+A+ +F + +N SW +IG ++ S+E
Sbjct: 288 RSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVE 347
Query: 372 LFERMLEEGMRANEVTLISVLSAC 395
LF +M E M ++ L +++S C
Sbjct: 348 LFNQMRAELMAIDQFALATLISGC 371
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 108/308 (35%), Gaps = 94/308 (30%)
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
L++C + + +H +G + V + N L+ Y CG L ARR+ +
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIK--- 83
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
EPN T+N ++ YA++G + A F R
Sbjct: 84 -------------------------------EPNVITHNIMMNGYAKQGSLSDAEELFDR 112
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
M D+ +WN ++S ++ G + G G
Sbjct: 113 MPRR----DVASWNTLMSDTSRP-------------------------AGSWMSCGALGC 143
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRI----------- 347
++ ++ L + D +AL+DM+ +CG + A LF +I R
Sbjct: 144 RELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAG 203
Query: 348 -------------------KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
++V SWN MI + G V ++ L M +G+R + T
Sbjct: 204 YAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTY 263
Query: 389 ISVLSACS 396
S L+AC+
Sbjct: 264 TSSLTACA 271
>gi|356513796|ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 595
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 168/511 (32%), Positives = 277/511 (54%), Gaps = 42/511 (8%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACV 124
A +FD + +P+ F N ++ A A +F A+ Y+ M N +TF +++K C
Sbjct: 59 ATFLFDHLHHPDAFHCNTIIRAYARKPDFPAALRFYYCKMLARSVPPNHYTFPLLIKVCT 118
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYS------------------------- 159
+ ++G + HA + GF +D+ N+LI MYS
Sbjct: 119 DIGSFREGLKGHARIVKFGFGSDLFARNSLIRMYSVFGRIGNARMVFDESCWLDLVSYNS 178
Query: 160 ------KCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN 213
K G + +AR+VF+ M +RDV+SW +I+GY V +D A LFE + E +
Sbjct: 179 MIDGYVKNGEIGAARKVFNEMPDRDVLSWNCLIAGYVGVGDLDAANELFETIP----ERD 234
Query: 214 QFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
++N +I AR G+ + A FF RM A V ++V+WN++++ A+ K E L LF
Sbjct: 235 AVSWNCMIDGCARVGNVSLAVKFFDRMPAA--VRNVVSWNSVLALHARVKNYGECLMLF- 291
Query: 274 GMLVSGIK--PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
G +V G + PN T+ VL A G + +G +H+ + + DV + L+ MY+K
Sbjct: 292 GKMVEGREAVPNEATLVSVLTACANLGKLSMGMWVHSFIRSNNIKPDVLLLTCLLTMYAK 351
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
CG++ A+ +F+ +++V SWN+MI YG HG+ D ++ELF M + G + N+ T ISV
Sbjct: 352 CGAMDLAKGVFDEMPVRSVVSWNSMIMGYGLHGIGDKALELFLEMEKAGQQPNDATFISV 411
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
LSAC+H G+V +G F M+ Y ++ EHY C+VD+L R+G + + +L+R VP+
Sbjct: 412 LSACTHAGMVMEGWWYFDLMQRVYKIEPKVEHYGCMVDLLARAGLVENSEELIRMVPVKA 471
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRK 511
+++ GA +GC+ H +L + + F E+ + +++LSN+ AA G W + E++R
Sbjct: 472 GSAIWGALLSGCSNHLDSELGEIVAKRFIELEPQDIGPYILLSNMYAAKGRWDDVEHVRL 531
Query: 512 IMKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
++KEK +QK+ S V +F K V+N S
Sbjct: 532 MIKEKGLQKEAASSLVH-LEDFESKYVKNNS 561
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 172/398 (43%), Gaps = 60/398 (15%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAG 59
N FP+ L+ C + R+G + HA + ++F+ ++ L+ +Y+
Sbjct: 106 NHYTFPL----------LIKVCTDIGSFREGLKGHARIVKFGFGSDLFA-RNSLIRMYSV 154
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
G + +AR+VFD+ ++ N M+ G A F+ M + + +++ +
Sbjct: 155 FGRIGNARMVFDESCWLDLVSYNSMIDGYVKNGEIGAARKVFNEMPDR----DVLSWNCL 210
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE--R 177
+ VG+ D+ ++ E D N +ID ++ G + A + F M R
Sbjct: 211 IAGYVGVGDLDAANELFETIP----ERDAVSWNCMIDGCARVGNVSLAVKFFDRMPAAVR 266
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE--PNQFTYNAIIASYARRGDSNAAFA 235
+VVSW S+++ + V E ++LF +M +EG E PN+ T +++ + A G +
Sbjct: 267 NVVSWNSVLALHARVKNYGECLMLFGKM-VEGREAVPNEATLVSVLTACANLGKLSMGMW 325
Query: 236 FFSRMTAEGFVPD-------------------------------LVTWNAMISGFAQSKR 264
S + + PD +V+WN+MI G+
Sbjct: 326 VHSFIRSNNIKPDVLLLTCLLTMYAKCGAMDLAKGVFDEMPVRSVVSWNSMIMGYGLHGI 385
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM-GLHIDVFTGS 323
++AL+LF M +G +PN+ T VL A G + G L+ R+ + V
Sbjct: 386 GDKALELFLEMEKAGQQPNDATFISVLSACTHAGMVMEGWWYFDLMQRVYKIEPKVEHYG 445
Query: 324 ALIDMYSKCGSLKDARTLFEITRIK-NVASWNAMI-GC 359
++D+ ++ G ++++ L + +K A W A++ GC
Sbjct: 446 CMVDLLARAGLVENSEELIRMVPVKAGSAIWGALLSGC 483
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 6/214 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C L G VH+ + +N++ L + L+ +YA CG ++ A+ VFD++P +
Sbjct: 310 VLTACANLGKLSMGMWVHSFIRSNNIKPDVLLLTCLLTMYAKCGAMDLAKGVFDEMPVRS 369
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V N M+M G +A+ F M + + N TF VL AC + +G
Sbjct: 370 VVSWNSMIMGYGLHGIGDKALELFLEMEKAGQQPNDATFISVLSACTHAGMVMEGWWYFD 429
Query: 138 VATQM-GFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKV 195
+ ++ E V ++D+ ++ GL+ ++ + + + W +++SG N
Sbjct: 430 LMQRVYKIEPKVEHYGCMVDLLARAGLVENSEELIRMVPVKAGSAIWGALLSGCSNHLDS 489
Query: 196 DEAVVLFERMKLEGLEPNQF-TYNAIIASYARRG 228
+ ++ +R +E LEP Y + YA +G
Sbjct: 490 ELGEIVAKRF-IE-LEPQDIGPYILLSNMYAAKG 521
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 281/542 (51%), Gaps = 43/542 (7%)
Query: 29 LRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L GKQ+H ++ + L+ + S+ + L+ +Y G V+ AR VF ++ ++ N M+
Sbjct: 951 LELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISG 1010
Query: 88 SAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLD-IKKGKQVHAVATQMGFE 145
+G + ++G F L+R+ + ++FT + VL+AC L Q+HA A + G
Sbjct: 1011 CTLSGLEECSVGMFVHLLRDSLLP-DQFTVASVLRACSSLEGGYYLATQIHACAMKAGVV 1069
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
D V ALID+YSK G + A +F D+ SW +++ GY +A+ L+ M
Sbjct: 1070 LDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILM 1129
Query: 206 KLEGLEPNQ-----------------------------------FTYNAIIASYARRGDS 230
+ G +Q F + ++ Y + G+
Sbjct: 1130 QESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEM 1189
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+A FS + + PD V W MISG ++ +E AL + M +S ++P+ T +
Sbjct: 1190 ESARRVFSEIPS----PDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATL 1245
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
++A L +++ GR+IHA + ++ D F ++L+DMY+KCG+++DAR LF+ T + +
Sbjct: 1246 VKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRI 1305
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
ASWNAMI +HG +++ F+ M G+ + VT I VLSACSH GLV + E F S
Sbjct: 1306 ASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYS 1365
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M++ YG++ EHY+C+VD L R+GR+ EA ++ +P + SM N C + R+
Sbjct: 1366 MQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRE 1425
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+ E+ + +V+LSN+ AA +W + R +M++ NV+K PGFS V+ +
Sbjct: 1426 TGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLK 1485
Query: 531 NE 532
N+
Sbjct: 1486 NK 1487
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 209/434 (48%), Gaps = 16/434 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L + + + L GK+ HA + T+ + + + L+ +YA CG ++SAR +FD P+ N
Sbjct: 662 ILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTN 721
Query: 78 VFMLNWMVMASAFTGNF---QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
++ W + SA + + F L+R + + T + V K C+ +
Sbjct: 722 RDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASES 781
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H A ++G + DV V AL+++Y+K GL+ AR +F GM RDVV W M+ Y +
Sbjct: 782 LHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCL 841
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-----PDL 249
EA++LF G P+ T + + + + F + F+ D+
Sbjct: 842 EYEAMLLFSEFHRTGFRPDDVTLRTL-SRVVKCKKNILELKQFKAYATKLFMYDDDGSDV 900
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
+ WN +S F Q EA+ F M+ S + + +T +L +++G++IH +
Sbjct: 901 IVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGI 960
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
V R GL V G+ LI+MY K GS+ AR++F ++ SWN MI G+ + S
Sbjct: 961 VMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECS 1020
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE---RYGVKISKEHYAC 426
+ +F +L + + ++ T+ SVL ACS +E G + + + GV +
Sbjct: 1021 VGMFVHLLRDSLLPDQFTVASVLRACSS---LEGGYYLATQIHACAMKAGVVLDSFVSTA 1077
Query: 427 VVDMLCRSGRMVEA 440
++D+ + G+M EA
Sbjct: 1078 LIDVYSKRGKMEEA 1091
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 19 LLGKCMKSKALRQGKQVHA----LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L+ C AL QG+Q+HA L C D + + LV +YA CG++ AR +F +
Sbjct: 1245 LVKACSLLTALEQGRQIHANIVKLNCAFDPFVM---TSLVDMYAKCGNIEDARGLFKRTN 1301
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKG 132
+ N M++ A GN +EA+ +F M+ ++ TF VL AC GL+ +
Sbjct: 1302 TRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVS-EAY 1360
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
+ +++ G E ++ + L+D S+ G + A +V M FE + ++++ C
Sbjct: 1361 ENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNA-CR 1419
Query: 192 VSKVDEAVVLFERMKLEGLEPN 213
V +VD KL LEP+
Sbjct: 1420 V-QVDRETGKRVAEKLLALEPS 1440
>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
Length = 794
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/519 (29%), Positives = 268/519 (51%), Gaps = 7/519 (1%)
Query: 20 LGKCMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
+ C+ + A + +GKQ HA+ N L + + L + ++ Y G + A ++FD +
Sbjct: 241 VSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMI 300
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+V N ++ G +EAI LMR + + T S ++ A ++K GK+
Sbjct: 301 EKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKE 360
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+ + G E+D+ + + +DMY+KCG + +A++VF ++D++ W +++S Y +
Sbjct: 361 IQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGL 420
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
EA+ LF M+LE + PN T+N II S R G N A F +M + G P+L++W
Sbjct: 421 SGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTT 480
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR-M 313
M++G Q+ EA+ + M S ++PN T+T L A S+ GR IH + R
Sbjct: 481 MMNGLVQNGCSEEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQ 540
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
++L+DMY+KCG + A +F + +NAMI Y +G V +I L+
Sbjct: 541 QYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLY 600
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
+ + G++ + +T+ S+LS C++G V + +E+F M ++G+K EHY +VD+L
Sbjct: 601 RSLEDGGVKPDNITITSLLS-CNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLAS 659
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G +A L+ ++P M + C+ + +L + + E +VM+
Sbjct: 660 AGETDKALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMI 719
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
SN A +G W E +R++MK K ++K+PG S ++ + E
Sbjct: 720 SNAYAVEGSWDEVAKMREMMKVKGLKKKPGCSWIQIKGE 758
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 230/464 (49%), Gaps = 37/464 (7%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C+ + L G+Q+HA +L D + +++KLV YA C + A+++F K+
Sbjct: 40 ILQGCVYERDLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRV 99
Query: 76 PNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NVF ++ G + A+ G+ ++ I+ N F V KAC L + G+
Sbjct: 100 RNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDN-FVVPNVCKACGALQWSRFGRG 158
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + G + V V ++L DMY KCG+L AR+VF + +R+ V+W +++ GY
Sbjct: 159 VHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGM 218
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAF------------- 236
+EA+ L M+ EG+EP + T + +++ A G + A A
Sbjct: 219 NEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTS 278
Query: 237 ------------FSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
++ M +G + D+VTWN +ISG+ Q EA+ + + M +K +
Sbjct: 279 ILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFD 338
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
VT++ ++ A T ++++G+EI R GL D+ S +DMY+KCGS+ +A+ +F+
Sbjct: 339 CVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFD 398
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
T K++ WN ++ Y G+ ++ LF M E + N +T ++ + G V +
Sbjct: 399 STVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNE 458
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
E+F M+ G+ + + +++ L ++G EA LR++
Sbjct: 459 AKEMFLQMQSS-GIFPNLISWTTMMNGLVQNGCSEEAILFLRKM 501
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 134/532 (25%), Positives = 222/532 (41%), Gaps = 89/532 (16%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLN--IFSLKSKLVGVYAGCGD 62
IFP N + N + C + R G+ VH + L+ +F + S L +Y CG
Sbjct: 133 IFPDNFVVPN----VCKACGALQWSRFGRGVHGYVAKAGLHHCVF-VASSLADMYGKCGV 187
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
++ AR VFD IP+ N N +++ G +EAI S MR+ + T S L A
Sbjct: 188 LDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSA 247
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
+ I++GKQ HA+A G E D +G ++++ Y K GL+ A +F GM E+DVV+W
Sbjct: 248 SANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTW 307
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLE---------------------------------- 208
+ISGY V+EA+ + + M+ E
Sbjct: 308 NLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIR 367
Query: 209 -GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
GLE + + + YA+ G A F + DL+ WN ++S +A S E
Sbjct: 368 HGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQK----DLILWNTLLSAYADSGLSGE 423
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
AL+LF M + + PN +T ++ + G + +E+ + G+
Sbjct: 424 ALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGI------------ 471
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
N+ SW M+ ++G + +I +M E +R N T
Sbjct: 472 -------------------FPNLISWTTMMNGLVQNGCSEEAILFLRKMQESRLRPNAFT 512
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA-----YD 442
+ LSAC++ + G I + S +VDM + G + +A
Sbjct: 513 ITVALSACANLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSK 572
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
L ++P+Y N+M A+ ++G+ A+T+ + G+ KPD + S
Sbjct: 573 LCSELPLY--NAMISAYA----LYGKVREAITLYRSLEDGGV-KPDNITITS 617
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 194/409 (47%), Gaps = 43/409 (10%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSI---VLKACVGLLDIKKGKQVHAVATQMG--FEN 146
G +EA+ SL+ E YR + I +L+ CV D+ G+Q+HA + G +
Sbjct: 13 GEIREAL---SLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYAR 69
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
+ + L+ Y+KC L A+ +F + R+V SW ++I C + + A++ F M
Sbjct: 70 NEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEML 129
Query: 207 LEGLEPNQFTYNAIIAS----------------YARRGDSNAAFAFFSRMTAEG------ 244
G+ P+ F + + A+ G + F S G
Sbjct: 130 ENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLD 189
Query: 245 -------FVPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
++PD V WNA++ G+ Q+ EA++L M GI+P VTV+ L A
Sbjct: 190 DARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASA 249
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
G I+ G++ HA+ GL +D G+++++ Y K G ++ A +F+ K+V +WN
Sbjct: 250 NMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNL 309
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
+I Y + G+V+ +I + + M E ++ + VTL +++SA + ++ G EI + R+
Sbjct: 310 LISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEI-QCYCIRH 368
Query: 416 GVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRN 461
G++ + VDM + G +V A +D Q + + N++ A+ +
Sbjct: 369 GLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYAD 417
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 17/178 (9%)
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG- 314
+S ++ EAL L M I+ +LQ + G++IHA + + G
Sbjct: 6 VSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGD 65
Query: 315 -LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
+ + + L+ Y+KC +L+ A+ LF R++NV SW A+IG + G+ + ++ F
Sbjct: 66 FYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGF 125
Query: 374 ERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE----IFRSMKERYG 416
MLE G+ + + +V AC HG + + GL + S+ + YG
Sbjct: 126 VEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYG 183
>gi|147834109|emb|CAN62187.1| hypothetical protein VITISV_003709 [Vitis vinifera]
Length = 560
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 171/537 (31%), Positives = 277/537 (51%), Gaps = 40/537 (7%)
Query: 27 KALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
++L + K++HA + N L+ ++++ YA D+ SAR +FD + +V++ N ++
Sbjct: 23 QSLPRTKKLHAFIIRNHLSDDPFYATRILRFYAINSDLCSARNLFDGTSHRSVYLWNSVI 82
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
A A F +A+ F+ M + + FTF+ VL+AC D + VH G
Sbjct: 83 RAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFDPDGLRVVHGGVVVSGLG 142
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
D G+AL+ YSK ++ A RVF+GM E+D+V W +M +GY D+ + LF M
Sbjct: 143 FDSVCGSALVTAYSKLCMVDEASRVFYGMAEQDLVLWNAMAAGYGYCGFWDKGLQLFSAM 202
Query: 206 KLEGLEPNQFTY-----------------------------------NAIIASYARRGDS 230
+ G +P+ +T +A+++ Y+R
Sbjct: 203 RSMGEQPDSYTMVGLISGLADPNLLGIGKGIHGFCLKSSFDCNAHVGSALVSMYSRCHCL 262
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
N+A+ F+ ++ PDLVTW+A+I+G ++S +AL F+ M + G + + + + V
Sbjct: 263 NSAYGVFTILSQ----PDLVTWSALITGLSKSGDYEKALLFFRKMNMEGKRVDPILIXSV 318
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A G + + G EIH V R GL +V SALIDMYSKCG + +F+ +N
Sbjct: 319 LAASGQSAILGPGSEIHGYVLRHGLESEVMISSALIDMYSKCGFVNLGVRVFDSMPNRNT 378
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
S+N+MI G HG+ + ++FE +LE+G + +E T ++L C H GLV G EIF
Sbjct: 379 VSYNSMILGLGIHGLAXQAFKMFEEVLEKGFKPDESTFSALLCTCCHAGLVNDGREIFSR 438
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M E + ++ EHY +V +L +G + EAYDL+ + + + GA + CN HG +
Sbjct: 439 MTEEFHIQARTEHYVHMVKLLGMAGELQEAYDLILSLQQPADSGIWGALLSCCNFHGNSE 498
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
LA + ++ FE K VMLSNI A D W + + LR ++E ++K PG S +
Sbjct: 499 LAXIVAQQLFENKPEKSAYRVMLSNIYAGDXRWDDVKKLRDDIQEAGIKKMPGLSWI 555
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 174/549 (31%), Positives = 283/549 (51%), Gaps = 49/549 (8%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C KC L KQ ++L T+ L + F L L + D+ L+FD++
Sbjct: 13 CCFHKCGTFDHL---KQTTSILITSGLAHHTFFLSDIL---RSATKDLGYTLLLFDRLAT 66
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
P +F+ N ++ + + Q + +S +R ++ TF ++LKA L + + Q
Sbjct: 67 PYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN-ENPFQF 125
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
+A + G + D V N+L+ ++ CG + +RR+F ++DVVSWT++I+G +
Sbjct: 126 YAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRA 185
Query: 196 DEAVVLFERMKLEGLEPNQFTY------------------------------------NA 219
EA+ F M+ G+E ++ T +A
Sbjct: 186 VEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSA 245
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ Y++ G + A F+ M +LV+W A+I+G+ Q R EALK+F+ M++ G
Sbjct: 246 LVDMYSKCGYCDDAVKVFNEMPTR----NLVSWGALIAGYVQCNRYKEALKVFQEMIIEG 301
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I+PN TVT L A GS+ GR +H V R L ++ G+AL+DMYSKCG + +A
Sbjct: 302 IEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEAL 361
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+FE K+V W AMI G SS+ LF +M+ ++ N VT + VLSAC+HGG
Sbjct: 362 LVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGG 421
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LV++GLE+FR M Y ++ + +HY C+VD+L R+GR+ EA + +PM T + GA
Sbjct: 422 LVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGAL 481
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+GC IH +L +G ++ +++L+N+ + +W A N+R++MK K V
Sbjct: 482 FSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVD 541
Query: 520 KQPGFSRVE 528
K PG S +E
Sbjct: 542 KSPGCSWIE 550
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 269/490 (54%), Gaps = 17/490 (3%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPN----PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
L+ Y+ G + A + K+ + P+VF W M S F N + + L RE +
Sbjct: 292 LINSYSQSGKCDDAMELMKKMESFRIVPDVF--TWTSMISGFAQNNRRSQA-LELFREML 348
Query: 109 Y---RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
N T + + AC L +KKG ++H+VA ++G D+ VGN+LIDMYSK G L
Sbjct: 349 LAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELE 408
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
ARRVF + ++DV +W SMI GYC +A LF +M + PN T+NA+I+ Y
Sbjct: 409 DARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYI 468
Query: 226 RRGDSNAAFAFFSRMTAEGFVP-DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+ GD + A F RM +G + D +WN++I+G+ Q+ +N+AL +F+ M I+PN+
Sbjct: 469 QNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNS 528
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
VT+ +L A + + +EIH + R L ++ + LID Y+K G++ A+T+F+
Sbjct: 529 VTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQG 588
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
K++ SWN++I Y HG DS+++LF++M + G++ + T +S++ A S G+V+KG
Sbjct: 589 ISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDKG 648
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
++F SM E Y + EH++ ++D+L RSG++ EA + + + + + + A
Sbjct: 649 KQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALLTASK 708
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC---AADGEWHEAENLRKIMKEKNVQKQ 521
IHG LA+ GE E+ +P F + I A G++ + LRK K ++
Sbjct: 709 IHGNIGLAIRAGECLLEL---EPSNFSIHQQILQMYALSGKFEDVSKLRKSEKRSETKQP 765
Query: 522 PGFSRVEKRN 531
G S +E +N
Sbjct: 766 LGCSWIEAKN 775
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 259/440 (58%), Gaps = 2/440 (0%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALL-CTNDLNIFSLKSKLVGVYAGCGDVNSAR 67
+N+ N LL C+ + G+++HA + ++N F +++KLV +YA CG + AR
Sbjct: 81 SNVKPNTYMQLLQSCIDQGSAELGRKLHARIGLLEEMNPF-VETKLVSMYAKCGSLGEAR 139
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
VF ++ N++ + M+ A + ++E + +F M E ++F +L+AC
Sbjct: 140 KVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQACGNCG 199
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D + GK +H++ + G ++ V N+++ +Y+KCG L ARR F M RD VSW S+I+
Sbjct: 200 DAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIIT 259
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
GYC +++++ LFE+M+ EG+EP T+N +I SY++ G + A +M + VP
Sbjct: 260 GYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMESFRIVP 319
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
D+ TW +MISGFAQ+ R ++AL+LF+ ML++GI+PN VTVT + A +++ G E+H
Sbjct: 320 DVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELH 379
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
++ ++G D+ G++LIDMYSK G L+DAR +F++ K+V +WN+MIG Y + G
Sbjct: 380 SVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCG 439
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+ +LF +M E + N VT +++S G ++ +++F M++ +K + +
Sbjct: 440 KAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSL 499
Query: 428 VDMLCRSGRMVEAYDLLRQV 447
+ ++G +A + RQ+
Sbjct: 500 IAGYLQNGHKNKALGIFRQM 519
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 132/274 (48%), Gaps = 28/274 (10%)
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL--HIDVFTGSALIDMYSKCGSL 335
S +KPN T +LQ+ GS ++GR++HA R+GL ++ F + L+ MY+KCGSL
Sbjct: 81 SNVKPN--TYMQLLQSCIDQGSAELGRKLHA---RIGLLEEMNPFVETKLVSMYAKCGSL 135
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+AR +F R +N+ +W+AMIG Y + M ++ F M+E+G+ +E L +L AC
Sbjct: 136 GEARKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQAC 195
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM------VEAYDLLRQVPM 449
+ G E G ++ S+ R G+ + ++ + + GR+ E D +V
Sbjct: 196 GNCGDAETG-KLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSW 254
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENL 509
NS+ + + L M EE E GL + +L N + G+ +A L
Sbjct: 255 ---NSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVT---WNILINSYSQSGKCDDAMEL 308
Query: 510 RKIMKEKNVQKQ--------PGFSRVEKRNEFVE 535
K M+ + GF++ +R++ +E
Sbjct: 309 MKKMESFRIVPDVFTWTSMISGFAQNNRRSQALE 342
>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
Length = 673
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 162/486 (33%), Positives = 250/486 (51%), Gaps = 41/486 (8%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
++ + L+ A CGD+ AR FD+IP NV N M+ A G+F A+ + M
Sbjct: 49 TVATALISALARCGDLEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPE 108
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
+ + ++ L +C GL D+++GK +H GF+ V VGNAL++MYSKC L A
Sbjct: 109 GVKPSDISYIHALCSCSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLA 168
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM-KLEGLEPNQFTY--------- 217
R F + +DVVSW SMI+ + + DEA+ + RM E LEP + T
Sbjct: 169 REAFERIDSKDVVSWNSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAALS 228
Query: 218 --------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
+A++++ + G + A A F RM ++V+
Sbjct: 229 LRSAGDTKLLQEDAIRLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERR----NVVS 284
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
W+ +I+ A+ R +A++LF M + GI+PN VT+ VL+A TG+I GR HA V
Sbjct: 285 WSGLIAALAEHGRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVS 344
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
G + +AL++MY KCG L ART+F+ +NV SW AM+ Y HG + +
Sbjct: 345 GCGFEAETNVANALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARR 404
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
+F+ M EG++ N +T +SVL CSH G+V GLE F M +G+ EHY CV+D+L
Sbjct: 405 VFKAMALEGIQPNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLL 464
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG-F 490
R+G + EA +LLR +P+ + + C +H D A + + ++ L +
Sbjct: 465 GRAGWLEEAEELLRTMPVEPDKAAWNSLLGACKVHSHTDRAKRIAKLACDLALPFASAPY 524
Query: 491 VMLSNI 496
V+LSN+
Sbjct: 525 VLLSNM 530
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 157/330 (47%), Gaps = 35/330 (10%)
Query: 110 RCNKFTFSIVLKACVGLL---DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
R N F+ +L+AC D + ++ GF+ DV+V ALI ++CG L
Sbjct: 7 RPNAVIFTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALARCGDLEG 66
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
AR F + ++VVSW SMI+ A+ ++ RM+ EG++P+ +Y + S +
Sbjct: 67 AREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHALCSCSG 126
Query: 227 RGDSNAAFAFFSRMTAEGF-------------------------------VPDLVTWNAM 255
D + R+ +GF D+V+WN+M
Sbjct: 127 LRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSM 186
Query: 256 ISGFAQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
I+ +Q +EAL+ ++ M+ ++P +T+ L A S + + R+G
Sbjct: 187 IAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQEDAIRLG 246
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L D+ GSAL+ KCG L AR +F+ +NV SW+ +I +HG +IELF
Sbjct: 247 LEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIELFH 306
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKG 404
RM +G++ NEVTL+SVL AC+ G + +G
Sbjct: 307 RMDLDGIQPNEVTLLSVLEACASTGAIAEG 336
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 141/281 (50%), Gaps = 4/281 (1%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
S LV CG ++ AR VFD++ NV + ++ A A G ++AI F M +
Sbjct: 255 SALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIELFHRMDLDGIQ 314
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N+ T VL+AC I +G++ HA + GFE + +V NAL++MY KCG L SAR V
Sbjct: 315 PNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMYGKCGHLGSARTV 374
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M R+VVSWT+M++GY + +EA +F+ M LEG++PN T+ +++ + + G
Sbjct: 375 FDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVV 434
Query: 231 NAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+ F M + G VP + +I ++ EA +L + M V +P+
Sbjct: 435 SDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTMPV---EPDKAAWNS 491
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
+L A + + I L C + L L +MY+
Sbjct: 492 LLGACKVHSHTDRAKRIAKLACDLALPFASAPYVLLSNMYT 532
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 43/229 (18%)
Query: 205 MKLEGLEPNQFTY--------------------------------------NAIIASYAR 226
M+L+G PN + A+I++ AR
Sbjct: 1 MELDGCRPNAVIFTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALAR 60
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
GD A F R+ A+ ++V+WN+MI+ + AL++++ M G+KP++++
Sbjct: 61 CGDLEGAREAFDRIPAK----NVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDIS 116
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
L + ++ G+ IH V G VF G+AL++MYSKC L AR FE
Sbjct: 117 YIHALCSCSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERID 176
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERML-EEGMRANEVTLISVLSA 394
K+V SWN+MI + + G D ++E + RM+ EE + ++TL+ L A
Sbjct: 177 SKDVVSWNSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGA 225
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGR---EIHALVCRMGLHIDVFTGSALIDMYSK 331
M + G +PN V T +L+A + EI V G DV +ALI ++
Sbjct: 1 MELDGCRPNAVIFTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALAR 60
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
CG L+ AR F+ KNV SWN+MI +HG ++E++ RM EG++ ++++ I
Sbjct: 61 CGDLEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHA 120
Query: 392 LSACSHGGLVEKGLEIFRSMKER 414
L +CS GL + LE +S+ +R
Sbjct: 121 LCSCS--GL--RDLEQGKSIHDR 139
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 271/520 (52%), Gaps = 55/520 (10%)
Query: 25 KSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
KS+++ + Q+HA + ++L + L KL YA G + + +F + +P++F+
Sbjct: 38 KSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFL 97
Query: 81 LNWMVMASAFTGNFQEA-IGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
+ ++ G +A + Y L+ I N+FTFS +LK+C K GK +H
Sbjct: 98 FTAAINTASINGLKDQAFLLYVQLLSSEI-NPNEFTFSSLLKSC----STKSGKLIHTHV 152
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
+ G D V L+D+Y+K G + SA++VF M ER +VS T+MI+
Sbjct: 153 LKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT------------ 200
Query: 200 VLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
YA++G+ AA A F M D+V+WN MI G+
Sbjct: 201 -----------------------CYAKQGNVEAARALFDSMCER----DIVSWNVMIDGY 233
Query: 260 AQSKRENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALV--CRMGLH 316
AQ N+AL LF+ +L G KP+ +TV L A G+++ GR IH V R+ L+
Sbjct: 234 AQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLN 293
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+ V TG LIDMYSKCGSL++A +F T K++ +WNAMI Y HG ++ LF M
Sbjct: 294 VKVCTG--LIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM 351
Query: 377 LE-EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
G++ ++T I L AC+H GLV +G+ IF SM + YG+K EHY C+V +L R+G
Sbjct: 352 QGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAG 411
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
++ AY+ ++ + M + + + C +HG L + E + ++ +V+LSN
Sbjct: 412 QLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSN 471
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
I A+ G++ +R +MKEK + K+PG S +E N+ E
Sbjct: 472 IYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHE 511
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 138/318 (43%), Gaps = 38/318 (11%)
Query: 24 MKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
+KS + + GK +H + L I + + LV VYA GDV SA+ VFD++P ++
Sbjct: 137 LKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSST 196
Query: 83 WMVMASAFTGNFQEAIGYFS--------------------------------LMREFIYR 110
M+ A GN + A F L+ E +
Sbjct: 197 AMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPK 256
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
++ T L AC + ++ G+ +H +V V LIDMYSKCG L A V
Sbjct: 257 PDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLV 316
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK-LEGLEPNQFTYNAIIASYARRGD 229
F+ +D+V+W +MI+GY +A+ LF M+ + GL+P T+ + + A G
Sbjct: 317 FNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGL 376
Query: 230 SNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
N F M E G P + + ++S ++ + A + K M + ++V +
Sbjct: 377 VNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNM---NMDADSVLWS 433
Query: 289 GVLQAGGLTGSIQIGREI 306
VL + L G +G+EI
Sbjct: 434 SVLGSCKLHGDFVLGKEI 451
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 264/514 (51%), Gaps = 43/514 (8%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+ + L+ +Y+ G V A VF +P +V N M+ GN EA+ M+
Sbjct: 184 VAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEE 243
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ + T S +L C D+ G VH + G E+DV V NALI+MYSK G L A+
Sbjct: 244 VKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQ 303
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
RVF GM RD+VSW S+I+ Y A+ F+ M G+ P+ T
Sbjct: 304 RVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLS 363
Query: 218 -------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
NA++ YA+ G + A A F ++ + D+++W
Sbjct: 364 DRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSR----DVISW 419
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSG--IKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
N +I+G+AQ+ +EA+ + M+ G I PN T +L A G++Q G +IH +
Sbjct: 420 NTLITGYAQNGLASEAIDAYN-MMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRL 478
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
+ L +DVF + LIDMY KCG L+DA +LF + WNA+I G HG + ++
Sbjct: 479 IKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKAL 538
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
+LF+ M +G++A+ +T +S+LSACSH GLV++ F +M++ Y +K + +HY C+VD+
Sbjct: 539 QLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDL 598
Query: 431 LCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGF 490
R+G + +AY+L+ +P+ S+ G C IHG +L + E+ +
Sbjct: 599 FGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYY 658
Query: 491 VMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
V+LSNI A G+W A +R + +++ ++K PG+
Sbjct: 659 VLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGW 692
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 165/518 (31%), Positives = 264/518 (50%), Gaps = 53/518 (10%)
Query: 32 GKQVHALLCT-NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
KQ+HALL L ++LV +YA GD++ + F I N+F N MV A
Sbjct: 67 AKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVR 126
Query: 91 TGNFQEAIGYFS-LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
G +++++ + L+ R + +TF VLKAC+ L D G+++H +MGFE+DV
Sbjct: 127 RGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEHDVY 183
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE- 208
V +LI +YS+ G + A +VF M RDV SW +MISG+C V EA+ + +RMK E
Sbjct: 184 VAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEE 243
Query: 209 ----------------------------------GLEPNQFTYNAIIASYARRGDSNAAF 234
GLE + F NA+I Y++ G A
Sbjct: 244 VKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQ 303
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F M V DLV+WN++I+ + Q+ AL FK ML G++P+ +TV +
Sbjct: 304 RVFDGME----VRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIF 359
Query: 295 GLTGSIQIGREIHALVCR-MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
G +IGR +H V R L +D+ G+AL++MY+K GS+ AR +FE ++V SW
Sbjct: 360 GQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISW 419
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEG--MRANEVTLISVLSACSHGGLVEKGLEIF-RS 410
N +I Y ++G+ +I+ + M+EEG + N+ T +S+L A SH G +++G++I R
Sbjct: 420 NTLITGYAQNGLASEAIDAYN-MMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRL 478
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
+K + + C++DM + GR+ +A L ++P T+ A + IHG +
Sbjct: 479 IKNCLFLDVFVA--TCLIDMYGKCGRLEDAMSLFYEIPQE-TSVPWNAIISSLGIHGHGE 535
Query: 471 LAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAE 507
A+ + ++ G++ FV L + C+ G EA+
Sbjct: 536 KALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQ 573
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 160/337 (47%), Gaps = 40/337 (11%)
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
F+ + Q I + + F++V ++C +I KQ+HA+ +G DV
Sbjct: 28 FSSSLQHKISHDPDNKNNKNNNVVVDFNLVFRSCT---NINVAKQLHALLLVLGKAQDVV 84
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV-DEAVVLFERMKLE 208
+ L+ +Y+ G L + F + +++ SW SM+S Y + D + E + L
Sbjct: 85 LLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLS 144
Query: 209 GLEPNQFTYNAIIAS--------------------------------YARRGDSNAAFAF 236
G+ P+ +T+ ++ + Y+R G A
Sbjct: 145 GVRPDFYTFPPVLKACLSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKV 204
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F M V D+ +WNAMISGF Q+ EAL++ M +K + VTV+ +L
Sbjct: 205 FVDMP----VRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQ 260
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+ + G +H V + GL DVF +ALI+MYSK G L+DA+ +F+ ++++ SWN++
Sbjct: 261 SNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSI 320
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
I Y ++ +++ F+ ML GMR + +T++S+ S
Sbjct: 321 IAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLAS 357
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
+I + +++HAL+ +G DV + L+ +Y+ G L + T F+ + KN+ SWN+M+
Sbjct: 63 NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVS 122
Query: 359 CYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSAC 395
Y + G S++ +L G+R + T VL AC
Sbjct: 123 AYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC 160
>gi|147791119|emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
Length = 677
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 254/485 (52%), Gaps = 48/485 (9%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGY--FSLMREFI 108
+ +V +Y+ CG++ A+ VFD+I + NV N + +G Q + F + ++ +
Sbjct: 230 TAVVTMYSNCGELVLAKKVFDQILDKNVVSYNAFI-----SGLLQNGAPHLVFDVFKDLL 284
Query: 109 YRC----NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
N T +L AC LL I+ G+Q+H + ++ D VG AL+DMYSKCG
Sbjct: 285 ESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCW 344
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
A +F ++L G N T+N++IA
Sbjct: 345 HWAYGIF---------------------------------IELSG-SRNLVTWNSMIAGM 370
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
G S+ A F ++ EG PD TWN MISGF+Q + EA K F M +G+ +
Sbjct: 371 MLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASL 430
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
++T +L+A ++Q G+EIH R + D F +ALIDMY KCG AR +F
Sbjct: 431 KSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQ 490
Query: 345 TRIK--NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+IK + A WNAMI YG++G S+ E+F +M EE ++ N TL+S+LS CSH G ++
Sbjct: 491 FQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEID 550
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G ++F+ M YG+ + EH+ C+VD+L RSGR+ EA +L+ ++P + S+ +
Sbjct: 551 RGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMP-EASVSVFASLLGA 609
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C H L M ++ E+ + P FV+LSNI A G W + E +R++M ++ ++K P
Sbjct: 610 CRHHSDSALGEEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDVERVREMMNDRGLKKPP 669
Query: 523 GFSRV 527
G S +
Sbjct: 670 GCSSI 674
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 171/355 (48%), Gaps = 38/355 (10%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G ++EA+ +S + +KFTF +LKA L +G+ +H + GF D+
Sbjct: 72 GFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAA 131
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
AL DMY K LL A +VF M R++ S ISG+ EA+ F+++ L
Sbjct: 132 TALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFR 191
Query: 212 PNQFTY--------------------------------NAIIASYARRGDSNAAFAFFSR 239
PN T A++ Y+ G+ A F +
Sbjct: 192 PNSVTIASVLPACASVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQ 251
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTG 298
+ + ++V++NA ISG Q+ + +FK +L SG PN+VT+ +L A
Sbjct: 252 ILDK----NVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLL 307
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMI 357
I+ GR+IH LV ++ ++ D G+AL+DMYSKCG A +F E++ +N+ +WN+MI
Sbjct: 308 YIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMI 367
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
+G D ++ELFE++ EG+ + T +++S S G V + + F M+
Sbjct: 368 AGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQ 422
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 5/232 (2%)
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
EAL L+ + S + + T +L+A S G+ +H + + G H+D++ +AL
Sbjct: 76 EALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAATALA 135
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
DMY K L A +FE +N+ S N I + ++G ++ F+++ R N V
Sbjct: 136 DMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSV 195
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T+ SVL AC+ VE ++ + + GV+ VV M G +V A + Q
Sbjct: 196 TIASVLPACAS---VELDGQV-HCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQ 251
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+ S AF +G +G L + ++ E P+ ++S + A
Sbjct: 252 ILDKNVVSY-NAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSA 302
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 15/226 (6%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHA-LLCTN-DLNIFSLKSKLVGVYAGCGDVNSARLV 69
S+ + LL C AL+ GK++H + TN D + F + + L+ +Y CG AR V
Sbjct: 429 SLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEF-ISTALIDMYMKCGHSYLARRV 487
Query: 70 FDKI---PNPNVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
F + P+ F W M S + G +Q A F+ M+E + N T +L C
Sbjct: 488 FCQFQIKPDDPAF---WNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCS 544
Query: 125 GLLDIKKGKQVHAVATQ-MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+I +G Q+ + + G ++D+ + G L A+ + H M E V +
Sbjct: 545 HTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMPEASVSVFA 604
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-YARRG 228
S++ G C D A+ KL LEP T I+++ YA +G
Sbjct: 605 SLL-GACR-HHSDSALGEEMAKKLSELEPQDPTPFVILSNIYAVQG 648
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 158/515 (30%), Positives = 271/515 (52%), Gaps = 41/515 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C + +L GKQ+HA + + I + S L+ +YA CG A+ VF+ + + N
Sbjct: 277 LTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNS 336
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
++ S F +++ F+ MR + ++F + ++ C +D+ G+Q+H++
Sbjct: 337 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 396
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ G + V N+LI +Y+KCG L +A VF M ERD+VSWTSMI+
Sbjct: 397 CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT----------- 445
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
+Y++ G+ A FF M + +TWNAM+
Sbjct: 446 ------------------------AYSQIGNIIKAREFFDGMATR----NAITWNAMLGA 477
Query: 259 FAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
+ Q E + LK++ ML + P+ VT + + G+ ++G +I + GL +
Sbjct: 478 YIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLIL 537
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
+V +A I MYSKCG + +A+ LF++ K+V SWNAMI Y +HGM + + F+ ML
Sbjct: 538 NVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML 597
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
+G + + ++ ++VLS CSH GLV++G F M +G+ EH++C+VD+L R+G +
Sbjct: 598 SKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHL 657
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
EA DL+ ++PM T + GA + C IHG +LA + FE+ +++L+ I
Sbjct: 658 TEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIY 717
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ G+ ++ +RK+M++K ++K PG+S +E N+
Sbjct: 718 SDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENK 752
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 177/410 (43%), Gaps = 73/410 (17%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSAR-LVFDKIPNPN 77
L C AL + +H L T L + L++ L+ Y CG ++ AR L+ I PN
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70
Query: 78 VFMLNWMVMASAFTGNFQEA-------------------IGYF-------------SLMR 105
V N M+ A G+ +A GYF S+ R
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
N FTF V+K+C L + Q+ + + F D V AL+DM+ +CG +
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
A R+F ER P F N+++A YA
Sbjct: 191 FASRLF-SQIER----------------------------------PTIFCRNSMLAGYA 215
Query: 226 RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ + A +F M D+V+WN MI+ +QS R EAL L M G++ ++
Sbjct: 216 KLYGIDHAIEYFEDMAER----DVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 271
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T T L A S+ G+++HA V R ID + SALI++Y+KCGS K+A+ +F
Sbjct: 272 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 331
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ +N SW +IG ++ S+ELF +M E M ++ L +++S C
Sbjct: 332 QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI- 344
+ L++ G G++ R +H + +GL VF + L+ Y CG+L DAR L
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+ NV + N M+ Y K G + + ELF+RM R + + +++S G
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRM----PRRDVASWNTLMSGYFQARRFLDG 121
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLC 432
LE F SM R G + C V C
Sbjct: 122 LETFVSM-HRSGDSLPNAFTFCCVMKSC 148
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 185/602 (30%), Positives = 288/602 (47%), Gaps = 82/602 (13%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAG----CGDVN--SARLVFD 71
LL +C +++R Q+HA LL + S+ +LV Y GDV AR +FD
Sbjct: 9 LLQQC---RSIRHLDQLHAHLLAHGPSAVASVVPQLVASYCALSGRAGDVALCHARRMFD 65
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR---CNKFTFSIVLKACVGLLD 128
++P+P+ F N ++ A + +G QEA+ L R+ + R N+FT VLKAC
Sbjct: 66 RVPDPDRFAYNSLIRAYSNSGCPQEAL---CLHRDVLRRGILPNEFTLPFVLKACSRARA 122
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF-ERDVVSWTSMIS 187
+ H VA ++G+ V VGNAL+ + G L +RR+F M R+VVSW +MI
Sbjct: 123 AEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIG 182
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------------ 217
G + EA LF M+ +G+ + FT+
Sbjct: 183 GCAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRV 242
Query: 218 -----NAIIASYARRGDSNAAFAFFSRMTAEGFVP------------------------- 247
NA++ Y + GD A F M + V
Sbjct: 243 DLILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMP 302
Query: 248 --DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
++++WNAMIS + Q R E L L+ M G+ P+ VT+ GVL G G + GR
Sbjct: 303 ERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRM 362
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
IH + V ++LIDMY++CG + + +LF KN SWN +IG HG
Sbjct: 363 IHCYIQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGR 422
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
++ F M+ + +E+T + +LSACSHGGL+E G F++M+ Y VK EHYA
Sbjct: 423 AQEAVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYA 482
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
C+VD+L R G + +A DL++ +PM + GA C IHG ++ ++ E+
Sbjct: 483 CMVDLLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGI 542
Query: 486 KPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFVEKEVQNES 542
FV++SN+ +W + + LRK+M+++ +K G S +E N EF +++++ES
Sbjct: 543 NGGLFVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSIEINNSIHEFGVEDIRHES 602
Query: 543 KA 544
+
Sbjct: 603 SS 604
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 257/512 (50%), Gaps = 35/512 (6%)
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
N A+L+ P V ++ S G F A+ YFS MR + N FTF KA
Sbjct: 9 NPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKAS 68
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
L GKQ+HA+A ++G ND VG + DMYSK GL A+R+F M R+V W
Sbjct: 69 TALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWN 128
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE 243
+ IS + +A+ F + G EP+ T+ A + + A + +
Sbjct: 129 AYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRS 188
Query: 244 GFVPDL-------------------------------VTWNAMISGFAQSKRENEALKLF 272
GF D+ V+W M++ Q+ + +A +F
Sbjct: 189 GFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVF 248
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
GI+ + V+ V+ A ++ GR +HAL + + D+F GSAL+DMY KC
Sbjct: 249 LMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKC 308
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
GS++D +F +N+ SWNAMI Y G VD ++ LFE M E + AN VTLI VL
Sbjct: 309 GSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVL 367
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
SACS GG V+ G EIF SM++RY ++ EHYAC+ DML R+G + AY+ ++++P+ T
Sbjct: 368 SACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPT 427
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
S+ GA N C ++G +L + F++ + V+LSN+ AA G W EA +RK
Sbjct: 428 ISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKE 487
Query: 513 MKEKNVQKQPGFSRVEKRNE---FVEKEVQNE 541
MK+ ++K G S V +N+ F K+ +E
Sbjct: 488 MKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHE 519
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 171/364 (46%), Gaps = 43/364 (11%)
Query: 32 GKQVHALLCTNDLNIFSLKSKLVG-----VYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
GKQ+HA+ L + + K VG +Y+ G A+ +FD++P NV + N +
Sbjct: 77 GKQIHAIA----LKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYIS 132
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
+ G +AI F R + TF L AC + G+Q+H + + GFE
Sbjct: 133 NAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEG 192
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
DVSV N +ID+Y KC + A VF+GM R+ VSW +M++ + ++A V+F +
Sbjct: 193 DVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGR 252
Query: 207 LEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFV--------------- 246
EG+E + +++I++YA G S A A + + + FV
Sbjct: 253 KEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIE 312
Query: 247 ---------PD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
P+ LV+WNAMISG+A + A+ LF+ M + N VT+ VL A
Sbjct: 313 DCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVA-NYVTLICVLSACS 371
Query: 296 LTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK-NVASW 353
G++++G EI ++ R + + + DM + G ++ A + I+ ++ W
Sbjct: 372 RGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVW 431
Query: 354 NAMI 357
A++
Sbjct: 432 GALL 435
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 2/223 (0%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C ++ L G+Q+H L+ + S+ + ++ VY C +V A +VF+ + N
Sbjct: 165 FLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRN 224
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
MV A ++A F + R+ + S V+ A G+ ++ G+ VHA
Sbjct: 225 SVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHA 284
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+A + E D+ VG+AL+DMY KCG + +VFH M ER++VSW +MISGY + VD
Sbjct: 285 LAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDM 344
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
A+ LFE M+ E + N T ++++ +R G F M
Sbjct: 345 AMTLFEEMQSEAV-ANYVTLICVLSACSRGGAVKLGNEIFESM 386
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 183/431 (42%), Gaps = 61/431 (14%)
Query: 157 MYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT 216
MYSK L A+ + R VV+WT++ISG A++ F +M+ E ++PN FT
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 217 YN-AIIASYA---------------RRGDSN------AAFAFFS---------RMTAEGF 245
+ A AS A + G N +AF +S R+ E
Sbjct: 61 FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
++ WNA IS R +A+ F G +P+ +T L A + +GR+
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+H LV R G DV + +ID+Y KC ++ A +F +N SW M+ ++
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY- 424
+ + +F +EG+ + + SV+SA + G+ GLE RS+ VK E
Sbjct: 241 KEKACVVFLMGRKEGIELTDYMVSSVISA--YAGI--SGLEFGRSV-HALAVKACVEGDI 295
Query: 425 ---ACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEE 478
+ +VDM + G + + + ++P + N+M + + G D+A+T+ EE
Sbjct: 296 FVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAH----QGDVDMAMTLFEE 351
Query: 479 FFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR------------ 526
+ + + + C+ G + + M+++ + +PG
Sbjct: 352 MQSEAVANYVTLICVLSACSRGGAVKLGNEIFESMRDR-YRIEPGAEHYACIADMLGRAG 410
Query: 527 -VEKRNEFVEK 536
VE+ EFV+K
Sbjct: 411 MVERAYEFVQK 421
>gi|302817788|ref|XP_002990569.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
gi|300141737|gb|EFJ08446.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
Length = 564
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 166/508 (32%), Positives = 253/508 (49%), Gaps = 45/508 (8%)
Query: 23 CMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C +L +GKQ H+ + L + L S L+ +Y CG AR +FD+IP NV
Sbjct: 69 CSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRIPVKNVVCW 128
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
N M+ A A G+F EA+ + M + ++ TF VL AC ++ G+ +H
Sbjct: 129 NVMIAAYAQNGHFSEALELYYDMN---LKPDRVTFLNVLHACT----LESGRLIHQDVVS 181
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
G E D VGNAL++M+ KCG L A+RVF + RDV+SW +++S Y EA L
Sbjct: 182 AGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQGHRKEAFEL 241
Query: 202 FERMKLEGLEPNQFTY--------------------------------NAIIASYARRGD 229
F+RM GL+PN TY N +I +Y +
Sbjct: 242 FKRMDKAGLQPNSVTYLSLLPACSSLEQLREIHQELADQGLEQDEQVGNTLITAYNKFSL 301
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
++ A F RM +V+W MI G + AL L++ M+V G++P+ V +
Sbjct: 302 EDSV-AVFERMKRRS----VVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRPDAVALVC 356
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
L A ++ GR+IH LV + DVF +A+++MY KCG +A +F+ +
Sbjct: 357 ALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVFQGMKTTT 416
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
VA+WN++IG Y +HG +++L+ERM G R + VTL+ L ACSH GL+++ E +
Sbjct: 417 VATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHLGLLDRAREFYS 476
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
M E Y V+ H+ C+VD+ CR+G + EA +L+ +P+ S A N C H
Sbjct: 477 GMVEDYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHISAWTALLNACKAHNDM 536
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
+ + E+ R+ FV+LS C
Sbjct: 537 ERGAWAACKAHELDSRRSSPFVVLSGFC 564
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 232/477 (48%), Gaps = 50/477 (10%)
Query: 56 VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI-YRCNKF 114
+Y CG V AR VF+ I + F N M+ A G+ +A+ F M + R ++
Sbjct: 1 MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
TF AC + +++GKQ H+ + G E+ + + +AL++MY +CG AR++F +
Sbjct: 61 TFVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRI 120
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE-------------------------- 208
++VV W MI+ Y EA+ L+ M L+
Sbjct: 121 PVKNVVCWNVMIAAYAQNGHFSEALELYYDMNLKPDRVTFLNVLHACTLESGRLIHQDVV 180
Query: 209 --GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
GLE ++F NA++ + + G + A F R+ D+++WNA++S + Q
Sbjct: 181 SAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIA----FRDVISWNALMSVYIQQGHRK 236
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
EA +LFK M +G++PN+VT +L A S++ REIH + GL D G+ LI
Sbjct: 237 EAFELFKRMDKAGLQPNSVTYLSLLPA---CSSLEQLREIHQELADQGLEQDEQVGNTLI 293
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
Y+K SL+D+ +FE + ++V SW MI +HG +++L+ M+ EG+R + V
Sbjct: 294 TAYNKF-SLEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRPDAV 352
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY--ACVVDMLCRSGRMVEA---Y 441
L+ L AC+ + +G +I R ++ G + + + VV+M + G+ EA +
Sbjct: 353 ALVCALDACTSVENLAEGRKIHRLVE---GTTMVTDVFVATAVVNMYGKCGKFAEAEAVF 409
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
++ + NS+ GA+ HG A+ + E E+ +PDG +L + A
Sbjct: 410 QGMKTTTVATWNSLIGAYAQ----HGHATDALKLYER-MELSGTRPDGVTLLCALFA 461
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L C L C + L +G+++H L+ T ++F + + +V +Y CG A VF +
Sbjct: 354 LVCALDACTSVENLAEGRKIHRLVEGTTMVTDVF-VATAVVNMYGKCGKFAEAEAVFQGM 412
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLD--- 128
V N ++ A A G+ +A+ + M R + T L AC +GLLD
Sbjct: 413 KTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHLGLLDRAR 472
Query: 129 -----IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS-W 182
+ + QV AV G L+D++ + G + A + M R +S W
Sbjct: 473 EFYSGMVEDYQVEAVPAHFG---------CLVDLFCRAGWIDEAEELIASMPVRPHISAW 523
Query: 183 TSMISG 188
T++++
Sbjct: 524 TALLNA 529
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 254/498 (51%), Gaps = 61/498 (12%)
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
S F + + A+ ++ MR+ + F VLKAC + + GK++H + + G +D
Sbjct: 84 SPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSD 143
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW----------------------TSM 185
V V NAL+ MYS+CG L SAR +F M ERDVVSW T+M
Sbjct: 144 VFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAM 203
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS---------------------- 223
I+GY + ++E LF RM E + PN T ++I S
Sbjct: 204 IAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGF 263
Query: 224 -------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
Y + G+ +A A F M + D++TW AMIS +AQ+ + A +
Sbjct: 264 GMSLALATALVDMYGKCGEIRSARAIFDSMKNK----DVMTWTAMISAYAQANCIDYAFQ 319
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
LF M +G++PN +T+ +L + G++ +G+ HA + + G+ +DV +ALIDMY+
Sbjct: 320 LFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYA 379
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
KCG + A+ LF +++ +WN M+ YG HG + +++LF M G++ N++T I
Sbjct: 380 KCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIG 439
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY 450
L ACSH GLV +G +F M +G+ EHY C+VD+L R+G + EAY ++ +P+
Sbjct: 440 ALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVT 499
Query: 451 VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR 510
++ GA C IH ++ E + + V++SNI AA W++ +R
Sbjct: 500 PNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMR 559
Query: 511 KIMKEKNVQKQPGFSRVE 528
K +K+ ++K+PG S +E
Sbjct: 560 KAVKDTGIKKEPGMSSIE 577
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 168/502 (33%), Positives = 261/502 (51%), Gaps = 42/502 (8%)
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
+A VFDK+ NV M+ G +EAI +F M + +KFT S V AC
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC---GLLCSARRVFHGMFERDVVS 181
L ++ GKQ+H+ A + G +DV +L+DMY+KC G + R+VF M + V+S
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS 338
Query: 182 WTSMISGY---CNVSKVDEAVVLFERMKLEG-LEPNQFTYNAIIASYARRGDSNAAFAFF 237
WT++I+GY CN++ EA+ LF M +G +EPN FT+++ + D
Sbjct: 339 WTALITGYMKNCNLAT--EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM---------------------- 275
+ G + N++IS F +S R +A + F+ +
Sbjct: 397 GQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFE 456
Query: 276 ----LVSGIKPNNVTVTGVLQAGGLT-----GSIQIGREIHALVCRMGLHIDVFTGSALI 326
L+S I + V+ A L+ GSI+ G +IH+ V ++GL + +ALI
Sbjct: 457 QAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALI 516
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
MYSKCGS+ A +F +NV SW +MI + KHG +E F +M+EEG++ NEV
Sbjct: 517 SMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEV 576
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T +++LSACSH GLV +G F SM E + +K EHYAC+VD+LCR+G + +A++ +
Sbjct: 577 TYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINT 636
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
+P + F C +H +L + E+ +P ++ LSNI A G+W E+
Sbjct: 637 MPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEES 696
Query: 507 ENLRKIMKEKNVQKQPGFSRVE 528
+R+ MKE+N+ K+ G S +E
Sbjct: 697 TEMRRKMKERNLVKEGGCSWIE 718
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 184/396 (46%), Gaps = 55/396 (13%)
Query: 92 GNFQEAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
G+ + A+ LM R+ I + TFS +LK+C+ D + GK VHA + E D +
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 151 GNALIDMYSKCGLLCSARRVFHGMF---ERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
N+LI +YSK G A VF M +RDVVSW++M++ Y N + +A+ +F
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT--------------------AEGFVP 247
GL PN + Y A+I R SN+ F R+T + FV
Sbjct: 160 LGLVPNDYCYTAVI-----RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214
Query: 248 ------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
++VTW MI+ Q EA++ F M++SG + + T++
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC---GSLKDARTLFEITR 346
V A ++ +G+++H+ R GL DV +L+DMY+KC GS+ D R +F+
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRME 332
Query: 347 IKNVASWNAMIGCYGKH-GMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKG 404
+V SW A+I Y K+ + +I LF M+ +G + N T S AC + G
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++ +R G+ + V+ M +S RM +A
Sbjct: 393 KQVLGQAFKR-GLASNSSVANSVISMFVKSDRMEDA 427
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 212/443 (47%), Gaps = 43/443 (9%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDV 63
I P+++++ LL C++++ R GK VHA L D+ S L + L+ +Y+ GD
Sbjct: 57 IRPMDSVT---FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDS 113
Query: 64 NSARLVFDKIPN-PNVFMLNWMVMASAFTGNFQE--AIGYFSLMREFIYRCNKFTFSIVL 120
A VF+ + +++W M + + N +E AI F E N + ++ V+
Sbjct: 114 AKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVI 173
Query: 121 KACVGLLDIKKGKQVHAVATQMG-FENDVSVGNALIDMYSKC-GLLCSARRVFHGMFERD 178
+AC + G+ + G FE+DV VG +LIDM+ K +A +VF M E +
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN 233
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA---------------S 223
VV+WT MI+ + EA+ F M L G E ++FT +++ + S
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Query: 224 YARRG----DSNAAFA-FFSRMTAEGFVPD------------LVTWNAMISGFAQS-KRE 265
+A R D + +++ +A+G V D +++W A+I+G+ ++
Sbjct: 294 WAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA 353
Query: 266 NEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
EA+ LF M+ G ++PN+ T + +A G ++G+++ + GL + ++
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
+I M+ K ++DA+ FE KN+ S+N + ++ + + +L + E + +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 385 EVTLISVLSACSHGGLVEKGLEI 407
T S+LS ++ G + KG +I
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQI 496
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 199/450 (44%), Gaps = 58/450 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGC---GDVNSARLVFDK 72
L + C + + L GKQ+H+ + L + ++ LV +YA C G V+ R VFD+
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGL-VDDVECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR----CNKFTFSIVLKACVGLLD 128
+ + +V ++W + + + N A +L E I + N FTFS KAC L D
Sbjct: 331 MEDHSV--MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
+ GKQV A + G ++ SV N++I M+ K + A+R F + E+++VS+ + + G
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 189 YC-----------------------------------NVSKVDEAVVLFERMKLEGLEPN 213
C NV + + + ++ GL N
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508
Query: 214 QFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
Q NA+I+ Y++ G + A F+ M ++++W +MI+GFA+ L+ F
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENR----NVISWTSMITGFAKHGFAIRVLETFN 564
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKC 332
M+ G+KPN VT +L A G + G R +++ + + + ++D+ +
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624
Query: 333 GSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL--- 388
G L DA + +V W +G H + ++LE + NE
Sbjct: 625 GLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE--LDPNEPAAYIQ 682
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
+S + AC+ G E+ E+ R MKER VK
Sbjct: 683 LSNIYACA--GKWEESTEMRRKMKERNLVK 710
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 11/263 (4%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
N D +GK + +A ++G L +N S+ + ++ ++ + A+ F+ +
Sbjct: 385 NLSDPRVGKQVLGQAFKRG------LASNS----SVANSVISMFVKSDRMEDAQRAFESL 434
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
N+ N + + NF++A S + E + FTF+ +L + I+KG+
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H+ ++G + V NALI MYSKCG + +A RVF+ M R+V+SWTSMI+G+
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTW 252
+ F +M EG++PN+ TY AI+++ + G + + F+ M + + P + +
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY 614
Query: 253 NAMISGFAQSKRENEALKLFKGM 275
M+ ++ +A + M
Sbjct: 615 ACMVDLLCRAGLLTDAFEFINTM 637
>gi|347954452|gb|AEP33726.1| chlororespiratory reduction 21, partial [Aethionema cordifolium]
Length = 618
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 156/543 (28%), Positives = 273/543 (50%), Gaps = 6/543 (1%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVY 57
RL+ + N + + C+ + A + +GKQ HA+ N L + + L + ++ Y
Sbjct: 45 RLLSDMMNEGIEPTRVTVSTCLSASAHMGGIEEGKQSHAIAIVNGLELDNILGTSILNFY 104
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
G + A ++FDK+ +V N ++ G ++AI LMR + + T S
Sbjct: 105 CKVGLIECAEMIFDKMIEKDVVTWNLLISGYVQQGLIEDAIYKCKLMRLENLKFDCVTIS 164
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
++ A D+ GKQ+ + E+D+ + +DMY+KCG + A++VF +
Sbjct: 165 TLMSAAAHTQDLNLGKQLQCYCLRNSLESDIVSASTTVDMYAKCGRILDAKKVFDSTVHK 224
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
D++ W ++++ Y S EA+ LF M+LE + PN ++N II S R G A F
Sbjct: 225 DLMLWNTLLAAYAESSHSGEALRLFYEMQLESVTPNVISWNLIILSLLRXGQVTEAKXMF 284
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
++ + G P+L++W +++G Q+ EA+ FK M SG++PN + T L A
Sbjct: 285 LQIQSTGISPNLISWTTLMNGLVQNGYSEEAIMYFKKMQESGLRPNPFSXTVALSACSNL 344
Query: 298 GSIQIGREIHALVCRMGLHI-DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
S+ GR IH + R H V ++L+DMY+KCG + A +F + +NAM
Sbjct: 345 ASLHFGRSIHGYIIRNQWHSGSVSLETSLLDMYAKCGDINKAERVFGNKLYSELPLYNAM 404
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I YG +G V+ +I L+ + ++ + +T ++LSAC+H G V + ++IF M ++G
Sbjct: 405 ISAYGLYGKVEEAITLYRDLEALDIKPDNITFTNLLSACNHTGSVNQAIQIFTDMVSKHG 464
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
++ EHY +VD+ SG + EA +++ +P M + C + +L +
Sbjct: 465 MQPCLEHYGLMVDLFASSGEIEEALRIVKDMPYEPDARMIQSLLAYCKKEHKTELVDYLS 524
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEK 536
+ E +V +SN AA G W E +R++MKEK ++K+PG S ++ ++
Sbjct: 525 KYLLESEPDNSGNYVTISNAYAAGGNWEEVMKMREMMKEKGLKKKPGCSWIQVAGRQEKE 584
Query: 537 EVQ 539
EV
Sbjct: 585 EVH 587
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 216/493 (43%), Gaps = 84/493 (17%)
Query: 56 VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFT 115
+Y CG ++ AR VFD++P NV N +++ G +EAI S M + T
Sbjct: 2 MYGKCGILDDARKVFDRMPERNVVAWNSLMVGYVQNGMNEEAIRLLSDMMNEGIEPTRVT 61
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
S L A + I++GKQ HA+A G E D +G ++++ Y K GL+ A +F M
Sbjct: 62 VSTCLSASAHMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIECAEMIFDKMI 121
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA-- 233
E+DVV+W +ISGY +++A+ + M+LE L+ + T + ++++ A D N
Sbjct: 122 EKDVVTWNLLISGYVQQGLIEDAIYKCKLMRLENLKFDCVTISTLMSAAAHTQDLNLGKQ 181
Query: 234 -----------------------FAFFSRMTAEGFV------PDLVTWNAMISGFAQSKR 264
+A R+ V DL+ WN +++ +A+S
Sbjct: 182 LQCYCLRNSLESDIVSASTTVDMYAKCGRILDAKKVFDSTVHKDLMLWNTLLAAYAESSH 241
Query: 265 ENEALKLFKGMLVSGIKPN----NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
EAL+LF M + + PN N+ + +L+ G +T + + +I +
Sbjct: 242 SGEALRLFYEMQLESVTPNVISWNLIILSLLRXGQVTEAKXMFLQIQS------------ 289
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
TG + N+ SW ++ ++G + +I F++M E G
Sbjct: 290 TGIS-----------------------PNLISWTTLMNGLVQNGYSEEAIMYFKKMQESG 326
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+R N + LSACS+ + G I + S ++DM + G + +A
Sbjct: 327 LRPNPFSXTVALSACSNLASLHFGRSIHGYIIRNQWHSGSVSLETSLLDMYAKCGDINKA 386
Query: 441 Y-----DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVML 493
L ++P+Y N+M A+ ++G+ + A+T+ + + + KPD F L
Sbjct: 387 ERVFGNKLYSELPLY--NAMISAY----GLYGKVEEAITLYRDLEALDI-KPDNITFTNL 439
Query: 494 SNICAADGEWHEA 506
+ C G ++A
Sbjct: 440 LSACNHTGSVNQA 452
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 151/316 (47%), Gaps = 32/316 (10%)
Query: 156 DMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF 215
DMY KCG+L AR+VF M ER+VV+W S++ GY +EA+ L M EG+EP +
Sbjct: 1 DMYGKCGILDDARKVFDRMPERNVVAWNSLMVGYVQNGMNEEAIRLLSDMMNEGIEPTRV 60
Query: 216 TYNAIIASYAR-----RGDSNAAFAFFSRMTAEGFV------------------------ 246
T + +++ A G + A A + + + +
Sbjct: 61 TVSTCLSASAHMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIECAEMIFDKM 120
Query: 247 --PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
D+VTWN +ISG+ Q +A+ K M + +K + VT++ ++ A T + +G+
Sbjct: 121 IEKDVVTWNLLISGYVQQGLIEDAIYKCKLMRLENLKFDCVTISTLMSAAAHTQDLNLGK 180
Query: 305 EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHG 364
++ R L D+ + S +DMY+KCG + DA+ +F+ T K++ WN ++ Y +
Sbjct: 181 QLQCYCLRNSLESDIVSASTTVDMYAKCGRILDAKKVFDSTVHKDLMLWNTLLAAYAESS 240
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY 424
++ LF M E + N ++ ++ + G V + +F ++ G+ + +
Sbjct: 241 HSGEALRLFYEMQLESVTPNVISWNLIILSLLRXGQVTEAKXMFLQIQST-GISPNLISW 299
Query: 425 ACVVDMLCRSGRMVEA 440
+++ L ++G EA
Sbjct: 300 TTLMNGLVQNGYSEEA 315
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 274/528 (51%), Gaps = 40/528 (7%)
Query: 39 LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAI 98
L ++ ++ F + S + +YA G V+ AR +FD N + N M+ EAI
Sbjct: 247 LGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAI 306
Query: 99 GYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDM 157
F +M + + TF L A L ++ G+Q+HA + V + NA+I M
Sbjct: 307 DLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVM 366
Query: 158 YSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
YS+CG + ++ +VF M ERDVV+W +M+S + DE ++L M+ +G + T
Sbjct: 367 YSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTL 426
Query: 218 NAIIA----------------------------------SYARRGDSNAAFAFFSRMTAE 243
A+++ YA+ G A F + +
Sbjct: 427 TALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSYLIDMYAKSGLITTAQQLFEKNS-- 484
Query: 244 GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
+ D TWNAMI+G+ Q+ E +F+ M+ ++PN VT+ +L A G+I +G
Sbjct: 485 DYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLG 544
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
++IH R L+ +VF G+AL+DMYSK G++ A +F T KN ++ MI YG+H
Sbjct: 545 KQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQH 604
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
GM + ++ LF ML G++ + VT +++LSACS+ GLV++GL IF+SM+ Y ++ S EH
Sbjct: 605 GMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSAEH 664
Query: 424 YACVVDMLCRSGRMVEAYDLLRQV-PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM 482
Y CV DML R GR+VEAY+ ++ + T + G+ C IHG +L + + EM
Sbjct: 665 YCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLEM 724
Query: 483 --GLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
G V+LSNI AA+G W + +RK M++K + K+ G S VE
Sbjct: 725 EKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVE 772
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 207/461 (44%), Gaps = 56/461 (12%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIY-RCNKFTFSIV 119
G + A +FD IP P + N +++ +A+ +++ MR + + +TFS
Sbjct: 51 GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSST 110
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC----GLLCSA-------- 167
LKAC +K GK +H + F + V N+L++MYS C L +A
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170
Query: 168 -RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
RRVF M +R+VV+W +MIS Y ++ EA +F M G+ P ++ + + R
Sbjct: 171 VRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWR 230
Query: 227 RGDSNAAFAFFSRMTAEG--FVPDLV-------------------------------TWN 253
D + A + + G FV D WN
Sbjct: 231 MSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWN 290
Query: 254 AMISGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
MI G+ Q+ EA+ LF ++ S ++VT L A +++GR++HA + +
Sbjct: 291 TMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILK 350
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
+ V +A+I MYS+CGS+ + +F ++V +WN M+ + ++G+ D + L
Sbjct: 351 SSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLML 410
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
M ++G + VTL ++LS S+ E G + + R+G++ + ++DM
Sbjct: 411 VFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLI-RHGIQFEGMD-SYLIDMYA 468
Query: 433 RSGRMVEAYDLLRQVPMY-----VTNSM-AGAFRNGCNIHG 467
+SG + A L + Y N+M AG +NG + G
Sbjct: 469 KSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEG 509
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 7/295 (2%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
L LL ++ GKQ HA L + + + S L+ +YA G + +A+ +F+K +
Sbjct: 426 LTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSYLIDMYAKSGLITTAQQLFEKNSD 485
Query: 76 PNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+ W M + +T N +E F M E R N T + +L AC + I GK
Sbjct: 486 YDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGK 545
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H A + +V VG AL+DMYSK G + A VF E++ V++T+MIS Y
Sbjct: 546 QIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHG 605
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTW 252
+ A+ LF M G++P+ T+ AI+++ + G + F M E + P +
Sbjct: 606 MGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSAEHY 665
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG-VLQAGGLTGSIQIGREI 306
+ + R EA + KG+ G + N + G +L A + G ++G+ +
Sbjct: 666 CCVADMLGRVGRVVEAYEFVKGL---GEEGNTFGIWGSLLGACRIHGEFELGKVV 717
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 170/508 (33%), Positives = 262/508 (51%), Gaps = 64/508 (12%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+ +++V V G G A VF +P PN+ + N M+ A A ++A+ + M
Sbjct: 44 VATQIVHVCNGHGRAAHAARVFAHVPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRM---- 99
Query: 109 YRC-------------NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALI 155
RC ++FT+ +LKAC GL + G+QVHA + G E+ V N+LI
Sbjct: 100 LRCLPDPSSSGGFSVGDRFTYPFLLKACGGLAASQLGRQVHAHVARSGCESHAIVQNSLI 159
Query: 156 DMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF 215
+MY++CG L AR+VF GM E+D VSW
Sbjct: 160 EMYTRCGDLSLARKVFDGMREKDAVSW--------------------------------- 186
Query: 216 TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD--LVTWNAMISGFAQSKRENEALKLFK 273
N +I+++AR G A F M PD +V+W A++SG+ A+++F+
Sbjct: 187 --NTLISAHARMGQMRKARELFHSM------PDKTVVSWTALVSGYTAVGDFAGAVEVFR 238
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
M + G +P++V++ VL A G++++GR I+A + G+ ++ +AL++MY+KCG
Sbjct: 239 QMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCG 298
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVL 392
+++A LF K+V SW+ IG HG +++LFE M EG + N +T + +L
Sbjct: 299 CIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLL 358
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
SACSH GL+++GL F MKE YGV+ S EHY CVVD+L RSGR+ A D + +P+
Sbjct: 359 SACSHAGLLDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPD 418
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
+ G+ + C H D AV E E+ VML+N+ AA G W + RK
Sbjct: 419 GKIWGSLLSACRSHSDVDTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWGNVASTRKE 478
Query: 513 MKEKNVQKQPGFSRVEKRN---EFVEKE 537
++ ++ +K PG S +E N EFV E
Sbjct: 479 IRSRSTRKTPGCSMIEVDNVVREFVAGE 506
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 249/471 (52%), Gaps = 39/471 (8%)
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
+G ++ A +F +I NPN+F+ N M+ + + N +A ++ + + TF
Sbjct: 64 SGTSLIDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFP 123
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
++K+C L I G Q H + GFE DV V N+L+ MY+ G +A +F M+
Sbjct: 124 FLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYV 183
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
DVVSWTSMI G+ GD +A F
Sbjct: 184 DVVSWTSMIRGFNKC-----------------------------------GDVESARKLF 208
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+M + +LVTW+ MISG+AQ+ ++A++LFK + G++ N + V+ +
Sbjct: 209 DQMPEK----NLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHL 264
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
G++++G H V + G+ +++ G+AL+DMY++CGS+ A +FE ++ SW A+I
Sbjct: 265 GALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALI 324
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
HG + S++ F M+E G+ ++T +VLSACSHGGLVE+G +IF SMK + V
Sbjct: 325 AGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRV 384
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
+ EHY C+VD+L R+G++ EA + ++P+ + GA C IH ++ +G+
Sbjct: 385 EPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGK 444
Query: 478 EFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
++ + +V+LSNI A EW + +R++MK K ++K PG S +E
Sbjct: 445 ILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIE 495
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 158/549 (28%), Positives = 282/549 (51%), Gaps = 41/549 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C S ++ G Q+HA + + L+++ + + LV +Y G + A ++F + +
Sbjct: 167 LQACEDSSFIKLGMQIHAAILKSGRVLDVY-VANALVAMYVRFGKMPEAAVIFGNLEGKD 225
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ N M+ G + EA+ +F ++ + ++ + ++ A L + GK++HA
Sbjct: 226 IVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHA 285
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
A + GF++++ VGN LIDMY+KC + R F M +D++SWT+ +GY +
Sbjct: 286 YAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQ 345
Query: 198 AVVLFERMKLEGLE----------------------------------PNQFTYNAIIAS 223
A+ L ++++EG++ + N II
Sbjct: 346 ALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDV 405
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
Y G + A F + + D+V+W +MIS + + N+AL++F M +G++P+
Sbjct: 406 YGECGIIDYAVRIFESIECK----DVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPD 461
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
VT+ +L A +++ G+EIH + R G ++ + L+DMY++CGS++DA +F
Sbjct: 462 YVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFT 521
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
T+ +N+ W AMI YG HG ++++ELF RM +E + + +T +++L ACSH GLV +
Sbjct: 522 CTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNE 581
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
G MK Y ++ EHY C+VD+L R + EAY +++ + T + A C
Sbjct: 582 GKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGAC 641
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
IH +++ E+ E+ L P +V++SN+ AA+G W + E +R MK + K PG
Sbjct: 642 RIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPG 701
Query: 524 FSRVEKRNE 532
S +E N+
Sbjct: 702 CSWIEVGNK 710
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 160/546 (29%), Positives = 261/546 (47%), Gaps = 52/546 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C + L G ++H L + F + + LV +YA C D+N AR +FD++ N
Sbjct: 64 LLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRN 123
Query: 78 VFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+++W + SA++GN EA+ FS M + N +TF+ L+AC IK G Q+
Sbjct: 124 D-VVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQI 182
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA + G DV V NAL+ MY + G + A +F + +D+V+W SM++G+
Sbjct: 183 HAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLY 242
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRG-----------------DSNA------ 232
EA+ F ++ L+P+Q + +II + R G DSN
Sbjct: 243 SEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTL 302
Query: 233 --AFAFFSRMTAEGFV------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+A M+ G DL++W +G+AQ+K +AL+L + + + G+ +
Sbjct: 303 IDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDA 362
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
+ +L A + +EIH R GL D + +ID+Y +CG + A +FE
Sbjct: 363 TMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVYGECGIIDYAVRIFES 421
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
K+V SW +MI CY +G+ + ++E+F M E G+ + VTL+S+LSA ++KG
Sbjct: 422 IECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKG 481
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL---RQVPMYVTNSMAGAFRN 461
EI R G + +VDM R G + +AY + + + + +M A+
Sbjct: 482 KEI-HGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAY-- 538
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRK--PD--GFVMLSNICAADGEWHEAENLRKIMK-EK 516
+HG + AV E F M K PD F+ L C+ G +E ++ +IMK E
Sbjct: 539 --GMHGYGEAAV---ELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEY 593
Query: 517 NVQKQP 522
++ P
Sbjct: 594 QLEPWP 599
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 196/403 (48%), Gaps = 53/403 (13%)
Query: 56 VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIY---RCN 112
+Y CG V A ++FDK+ ++F W M + N EA+G + RE + +
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIF--TWNAMMGGYVSN-GEALGALEMYREMRHLGVSFD 57
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
+TF ++LKAC + D+ G ++H +A + G ++ V V N+L+ +Y+KC + AR++F
Sbjct: 58 SYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFD 117
Query: 173 GMFER-DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------- 217
M+ R DVVSW S+IS Y EA+ LF M G+ N +T+
Sbjct: 118 RMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIK 177
Query: 218 ---------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
NA++A Y R G A F + + D+VTWN+M+
Sbjct: 178 LGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGK----DIVTWNSML 233
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+GF Q+ +EAL+ F + + +KP+ V++ ++ A G G + G+EIHA + G
Sbjct: 234 TGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFD 293
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
++ G+ LIDMY+KC + F++ K++ SW Y ++ ++EL ++
Sbjct: 294 SNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQL 353
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
EGM + + S+L AC +GL +KE +G I
Sbjct: 354 QMEGMDVDATMIGSILLAC-------RGLNCLGKIKEIHGYTI 389
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 126/260 (48%), Gaps = 5/260 (1%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
+L C L + K++H L+ L++ ++ VY CG ++ A +F+ I +V
Sbjct: 368 ILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDV 427
Query: 79 FMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++W M S + N +A+ FS M+E + T +L A L +KKGK++H
Sbjct: 428 --VSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIH 485
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ GF + S+ N L+DMY++CG + A ++F R+++ WT+MIS Y +
Sbjct: 486 GFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGE 545
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAM 255
AV LF RMK E + P+ T+ A++ + + G N +F M E P + +
Sbjct: 546 AAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCL 605
Query: 256 ISGFAQSKRENEALKLFKGM 275
+ + EA ++ K M
Sbjct: 606 VDLLGRRNCLEEAYQIVKSM 625
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 265/507 (52%), Gaps = 37/507 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLM------ 104
+V Y G GD++SA + F KIP PNV ++W+ M S F G EA F+ M
Sbjct: 208 MVDGYVGVGDLDSAWMFFKKIPTPNV--VSWVTMLSGFAHYGRMTEARNLFNEMPTKNLV 265
Query: 105 ----------RE-FIYRCNKFTFSIVLKACV-------GLLDIKKGKQVHAVATQMGFEN 146
RE I K + K V G + + K Q + M ++N
Sbjct: 266 SWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKN 325
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
++ A+I+ Y + G + A +F + RD V W SMI+GY + + DEA+ LF+ M
Sbjct: 326 -IAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMV 384
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
+ + ++N +IA+YA+ G + A F+ M ++V+WN++I+G+ Q+
Sbjct: 385 CKDM----VSWNTMIAAYAQAGQMDKALEMFNEMQER----NVVSWNSLITGYVQNGLYF 436
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
EAL F M G KP+ T+ L+A ++ +G ++H L + G D+F +A++
Sbjct: 437 EALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAIL 496
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
MY+K G + +A +F + K+V SWN++I Y +G ++ELFE M G+ +EV
Sbjct: 497 TMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEV 556
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T +LSAC+HGG V++GL +F+SM E Y +K EHYACV+++L R GR+ EA ++++
Sbjct: 557 TFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQG 616
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
+ + + GA C IH +LA E + + +V+LSN+ A G W
Sbjct: 617 MKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMV 676
Query: 507 ENLRKIMKEKNVQKQPGFSRVEKRNEF 533
E +R +MKE +KQPG S +E N+
Sbjct: 677 ERVRVLMKENKAEKQPGCSWIEIDNQL 703
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 193/408 (47%), Gaps = 43/408 (10%)
Query: 30 RQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
R + V L + NI + S ++ YA G + +AR +FD +P N+ N M+
Sbjct: 30 RIEEAVAVFLKMTERNIVTYNS-MISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYL 88
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
++A F M ++ + +++++++ + +++K +++ + + D
Sbjct: 89 HNELVEDAARLFDRM----FKRDIYSWTLMITCYTRIGELEKARELFNLLPD---KQDTV 141
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
NALI Y+K L A+++F M ++VVSW S++SGY K+ + FE M
Sbjct: 142 CRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMG--- 198
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
E N ++N ++ Y GD ++A+ FF ++ P++V+W M+SGFA R EA
Sbjct: 199 -ERNVVSWNLMVDGYVGVGDLDSAWMFFKKIP----TPNVVSWVTMLSGFAHYGRMTEAR 253
Query: 270 KLFKGMLVSGIKPNNVTV----------------------TGVLQAGGLTGSIQIGREIH 307
LF M + N + V + G +++G+ +
Sbjct: 254 NLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQ 313
Query: 308 AL-VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
A + + + ++ +A+I+ Y + G + +A +F +++ WN+MI Y G
Sbjct: 314 AREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRT 373
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
D ++ LF+ M+ + M V+ ++++A + G ++K LE+F M+ER
Sbjct: 374 DEALRLFQEMVCKDM----VSWNTMIAAYAQAGQMDKALEMFNEMQER 417
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 196/416 (47%), Gaps = 50/416 (12%)
Query: 130 KKGKQVHAVATQMGF-ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
+ G+ AVA + E ++ N++I Y+K G + +AR +F M +R++VSW SMI+G
Sbjct: 27 RSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAG 86
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
Y + V++A LF+RM + + +++ +I Y R G+ A F+ + + D
Sbjct: 87 YLHNELVEDAARLFDRM----FKRDIYSWTLMITCYTRIGELEKARELFNLLPDK---QD 139
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI-H 307
V NA+I+G+A+ + EA KLF MLV + N ++G + G + +Q +
Sbjct: 140 TVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGE 199
Query: 308 ALVCRMGLHIDVFTGSALIDM----------------------YSKCGSLKDARTLFEIT 345
V L +D + G +D ++ G + +AR LF
Sbjct: 200 RNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEM 259
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
KN+ SWNAMIG Y + +D + +LF M E+ + V+ ++++ G + +
Sbjct: 260 PTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEK----DSVSWTAMINGYVRVGKLLQAR 315
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT---NSMAGAFRNG 462
EI M + I+ + +++ +SGRM EA ++ Q+ + + NSM + +
Sbjct: 316 EILNLMPYK---NIAAQ--TAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAH- 369
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C GR D A+ + F EM + + + A G+ +A + M+E+NV
Sbjct: 370 C---GRTDEALRL---FQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNV 419
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
VFT + I + G +++A +F +N+ ++N+MI Y K+G + ++ ELF+ M +
Sbjct: 15 VFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC--RSGR 436
N V+ S+++ H LVE +F M +R + Y+ + + C R G
Sbjct: 75 R----NLVSWNSMIAGYLHNELVEDAARLFDRMFKR-------DIYSWTLMITCYTRIGE 123
Query: 437 MVEAYDLLRQVP 448
+ +A +L +P
Sbjct: 124 LEKARELFNLLP 135
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 173/571 (30%), Positives = 284/571 (49%), Gaps = 43/571 (7%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARL 68
L+ + L LL + + ++R G+ VHA + + L + L+ +Y+ SARL
Sbjct: 4 LTADALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARL 63
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
V P NV +V A G+F A+ F MR N FTF V KA L
Sbjct: 64 VLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRL 123
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
GKQ+HA+A + G DV VG + DMY K L AR++F + ER++ +W + IS
Sbjct: 124 PVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISN 183
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFT-------------------------------- 216
+ EA+ F + G +PN T
Sbjct: 184 SVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTD 243
Query: 217 ---YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
YN +I Y + ++ F+ M + + V+W ++++ + Q+ + +A L+
Sbjct: 244 VSVYNGLIDFYGKCKQIRSSEIIFAEMGMK----NAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
++ ++ ++ VL A +++GR IHA + + ++F GSAL+DMY KCG
Sbjct: 300 RSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCG 359
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG--MRANEVTLISV 391
++D+ F+ KN+ + N++IG Y G VD ++ LFE M G N +T +S+
Sbjct: 360 CIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSL 419
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
LSACS G VE G++IF SMK YG++ EHY+C+VDML R+G + +A++ ++++P+
Sbjct: 420 LSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKP 479
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRK 511
T S+ GA +N C +HG+ L + E F++ + V+LSN AA G W EA +R+
Sbjct: 480 TISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVRE 539
Query: 512 IMKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
MK ++K G+S + +N+ + ++ S
Sbjct: 540 EMKGVGIKKGAGYSWITVKNQVHAFQAKDRS 570
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 259/498 (52%), Gaps = 42/498 (8%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
VFDK+ NV M+ G +EAI +F M + +KFT S V AC L +
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKC---GLLCSARRVFHGMFERDVVSWTSM 185
+ GKQ+H+ A + G +DV +L+DMY+KC G + R+VF M + V+SWT++
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 186 ISGY---CNVSKVDEAVVLFERMKLEG-LEPNQFTYNAIIASYARRGDSNAAFAFFSRMT 241
I+GY CN++ EA+ LF M +G +EPN FT+++ + D +
Sbjct: 343 ITGYMKNCNLAT--EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 242 AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM-------------------------- 275
G + N++IS F +S R +A + F+ +
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460
Query: 276 LVSGIKPNNVTVTGVLQAGGLT-----GSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
L+S I + V+ A L+ GSI+ G +IH+ V ++GL + +ALI MYS
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
KCGS+ A +F +NV SW +MI + KHG +E F +M+EEG++ NEVT ++
Sbjct: 521 KCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVA 580
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY 450
+LSACSH GLV +G F SM E + +K EHYAC+VD+LCR+G + +A++ + +P
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640
Query: 451 VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR 510
+ F C +H +L + E+ +P ++ LSNI A G+W E+ +R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMR 700
Query: 511 KIMKEKNVQKQPGFSRVE 528
+ MKE+N+ K+ G S +E
Sbjct: 701 RKMKERNLVKEGGCSWIE 718
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 184/396 (46%), Gaps = 55/396 (13%)
Query: 92 GNFQEAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
G+ + A+ LM R+ I + TFS +LK+C+ D + GK VHA + E D +
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 151 GNALIDMYSKCGLLCSARRVFHGMF---ERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
N+LI +YSK G A VF M +RDVVSW++M++ Y N + +A+ +F
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT--------------------AEGFVP 247
GL PN + Y A+I R SN+ F R+T + FV
Sbjct: 160 LGLVPNDYCYTAVI-----RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214
Query: 248 ------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
++VTW MI+ Q EA++ F M++SG + + T++
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC---GSLKDARTLFEITR 346
V A ++ +G+++H+ R GL DV +L+DMY+KC GS+ D R +F+
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRME 332
Query: 347 IKNVASWNAMIGCYGKH-GMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKG 404
+V SW A+I Y K+ + +I LF M+ +G + N T S AC + G
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++ +R G+ + V+ M +S RM +A
Sbjct: 393 KQVLGQAFKR-GLASNSSVANSVISMFVKSDRMEDA 427
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 225/476 (47%), Gaps = 44/476 (9%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDV 63
I P+++++ LL C++++ R GK VHA L D+ S L + L+ +Y+ GD
Sbjct: 57 IRPMDSVT---FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDS 113
Query: 64 NSARLVFDKIPN-PNVFMLNWMVMASAFTGNFQE--AIGYFSLMREFIYRCNKFTFSIVL 120
A VF+ + +++W M + + N +E AI F E N + ++ V+
Sbjct: 114 AKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVI 173
Query: 121 KACVGLLDIKKGKQVHAVATQMG-FENDVSVGNALIDMYSKC-GLLCSARRVFHGMFERD 178
+AC + G+ + G FE+DV VG +LIDM+ K +A +VF M E +
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN 233
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA---------------S 223
VV+WT MI+ + EA+ F M L G E ++FT +++ + S
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Query: 224 YARRG----DSNAAFA-FFSRMTAEGFVPD------------LVTWNAMISGFAQS-KRE 265
+A R D + +++ +A+G V D +++W A+I+G+ ++
Sbjct: 294 WAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA 353
Query: 266 NEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
EA+ LF M+ G ++PN+ T + +A G ++G+++ + GL + ++
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
+I M+ K ++DA+ FE KN+ S+N + ++ + + +L + E + +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
T S+LS ++ G + KG +I S + G+ ++ ++ M + G + A
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQI-HSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 199/450 (44%), Gaps = 58/450 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGC---GDVNSARLVFDK 72
L + C + + L GKQ+H+ + L + ++ LV +YA C G V+ R VFD+
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGL-VDDVECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR----CNKFTFSIVLKACVGLLD 128
+ + +V ++W + + + N A +L E I + N FTFS KAC L D
Sbjct: 331 MEDHSV--MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
+ GKQV A + G ++ SV N++I M+ K + A+R F + E+++VS+ + + G
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 189 YC-----------------------------------NVSKVDEAVVLFERMKLEGLEPN 213
C NV + + + ++ GL N
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508
Query: 214 QFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
Q NA+I+ Y++ G + A F+ M ++++W +MI+GFA+ L+ F
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENR----NVISWTSMITGFAKHGFAIRVLETFN 564
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKC 332
M+ G+KPN VT +L A G + G R +++ + + + ++D+ +
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624
Query: 333 GSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL--- 388
G L DA + +V W +G H + ++LE + NE
Sbjct: 625 GLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE--LDPNEPAAYIQ 682
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
+S + AC+ G E+ E+ R MKER VK
Sbjct: 683 LSNIYACA--GKWEESTEMRRKMKERNLVK 710
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 11/263 (4%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
N D +GK + +A ++G L +N S+ + ++ ++ + A+ F+ +
Sbjct: 385 NLSDPRVGKQVLGQAFKRG------LASNS----SVANSVISMFVKSDRMEDAQRAFESL 434
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
N+ N + + NF++A S + E + FTF+ +L + I+KG+
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H+ ++G + V NALI MYSKCG + +A RVF+ M R+V+SWTSMI+G+
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTW 252
+ F +M EG++PN+ TY AI+++ + G + + F+ M + + P + +
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY 614
Query: 253 NAMISGFAQSKRENEALKLFKGM 275
M+ ++ +A + M
Sbjct: 615 ACMVDLLCRAGLLTDAFEFINTM 637
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 270/519 (52%), Gaps = 34/519 (6%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N+F+ S LV Y G V A VFD++P +V N M+ +A+ M
Sbjct: 101 NVFASGS-LVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRM 159
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
+ T S VL CV L D +H A + G ++ V NALID+Y K G+L
Sbjct: 160 VGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGML 219
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
A VF GM RD+V+W S+IS KV AV LF M G+ P+ T ++ ++
Sbjct: 220 TEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAV 279
Query: 225 ARRGDSNAA--------------------------FAFFSRMTAEGFV----PD--LVTW 252
A+ GD A +A S++ A V PD +V+W
Sbjct: 280 AQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSW 339
Query: 253 NAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
N +I+G+ Q+ NEA++++ M G+KP T VL A G +Q G +HAL
Sbjct: 340 NTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSI 399
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
+ GL++DV+ + LID+Y+KCG L +A LFE ++ WNA+I G HG ++
Sbjct: 400 KTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALS 459
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LF +M +E ++ + VT +S+L+ACSH GLV++G F M+ YG+ +HY C+VDML
Sbjct: 460 LFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDML 519
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
R+G++ EA++ ++ +P+ +++ GA C IHG ++ + FE+ +V
Sbjct: 520 GRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYV 579
Query: 492 MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
++SN+ A G+W + +R +++ +N+QK PG+S +E +
Sbjct: 580 LMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVK 618
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 105/195 (53%), Gaps = 4/195 (2%)
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
++L L PN F +++ +Y R G A+ F M D+ WNAM+SG ++ R
Sbjct: 93 LRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPER----DVPAWNAMLSGLCRNTR 148
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+A+ L M+ G+ + VT++ VL + G + +H + GL ++F +A
Sbjct: 149 AADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNA 208
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
LID+Y K G L +A +F ++++ +WN++I + G V +++ELF M+E G+ +
Sbjct: 209 LIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPD 268
Query: 385 EVTLISVLSACSHGG 399
+TL+S+ SA + G
Sbjct: 269 VLTLVSLASAVAQCG 283
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 29 LRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+QG ++HAL LN+ + + L+ +YA CG + A +F+ +P + N ++
Sbjct: 388 LQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAG 447
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQ-VHAVATQMGF 144
G+ +A+ FS M++ + + TF +L AC GL+D +G+ + T G
Sbjct: 448 LGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVD--QGRSFFDLMQTVYGI 505
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKVDEAVVLFE 203
++DM + G L A M + D W +++ G C + E +
Sbjct: 506 VPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALL-GACRIHGNVEMGKVAS 564
Query: 204 RMKLEGLEPNQFTYNAIIAS-YARRG 228
+ E L+P Y ++++ YA+ G
Sbjct: 565 QNLFE-LDPENVGYYVLMSNMYAKIG 589
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 265/516 (51%), Gaps = 49/516 (9%)
Query: 26 SKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
S ++ + Q+HA + ++L I L KL YA G + + +F + +P++F+
Sbjct: 37 SHSVDEVLQIHAAILRHNLLIHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLF 96
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
+ ++ G +A + + N+FTFS +LK+C K GK +H +
Sbjct: 97 TAAINTASINGLKDQAFLLYVQLLSSQINPNEFTFSSILKSC----STKSGKLIHTHVLK 152
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
G D V L+D+Y+K G + SA++VF M ER +VS T+MI+
Sbjct: 153 FGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMIT-------------- 198
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
YA++G+ AA A F RM D+V+WN MI G++Q
Sbjct: 199 ---------------------CYAKQGNVEAARALFDRMCER----DIVSWNVMIDGYSQ 233
Query: 262 SKRENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
++AL LF+ +L G KP+ +TV L A G+++ GR IH V + ++V
Sbjct: 234 HGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVK 293
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE-E 379
+ALIDMYSKCGSL++A +F T K++ +WNAMI Y HG ++ LF+ M
Sbjct: 294 VCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGIT 353
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G++ ++T I L AC+H GLV +G++IF SM + YG+K EHY C+V +L R+G++
Sbjct: 354 GLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKR 413
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
AY++++ + M + + + C +HG L + E + +V+LSNI A
Sbjct: 414 AYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYAL 473
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
G++ +R +MKEK + K+PG S +E N+ E
Sbjct: 474 VGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHE 509
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 38/318 (11%)
Query: 24 MKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
+KS + + GK +H + L + + + LV +YA GDV SA+ VFD++P ++
Sbjct: 135 LKSCSTKSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSST 194
Query: 83 WMVMASAFTGNFQEAIGYFSLM--REFIY------------------------------R 110
M+ A GN + A F M R+ + +
Sbjct: 195 AMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPK 254
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
++ T L AC + ++ G+ +H +V V ALIDMYSKCG L A V
Sbjct: 255 PDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLV 314
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK-LEGLEPNQFTYNAIIASYARRGD 229
F+ +D+V+W +MI+GY +A+ LF+ M+ + GL+P T+ + + A G
Sbjct: 315 FNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGL 374
Query: 230 SNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
N F M E G P + + ++S ++ + A ++ K M ++ ++V +
Sbjct: 375 VNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNM---NMEADSVLWS 431
Query: 289 GVLQAGGLTGSIQIGREI 306
VL + L G +G+EI
Sbjct: 432 SVLGSCKLHGEFMLGKEI 449
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 162/506 (32%), Positives = 262/506 (51%), Gaps = 20/506 (3%)
Query: 33 KQVHALLCTNDLN---------IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+Q+HAL+ N + + +VG A A +F +IP P+ FM N
Sbjct: 18 RQIHALMIVNGFTSNVGFLRKLVLTTAMSMVGPAATTAVTQYAVQMFAQIPQPDTFMWNT 77
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
+ S+ + + A+ ++ M + + FTF +VLKAC L + G VH ++G
Sbjct: 78 YIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKLFWVNTGSVVHGRVFRLG 137
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
F ++V V N L+ ++KCG L A +F + DVV+W+++I+GY + A LF+
Sbjct: 138 FGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAGYAQRGDLSVARKLFD 197
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
M L ++N +I +Y + G+ A F E + D+V+WNAM+ G+
Sbjct: 198 EMPKRDL----VSWNVMITAYTKHGEMECARRLFD----EAPMKDVVSWNAMVGGYVLHN 249
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL-HIDVFTG 322
EAL+LF M G P+ VT+ +L A G G ++HA + + + G
Sbjct: 250 LNQEALELFDEMCEVGECPDEVTMLSLLSACADLG--DXGEKVHAKIMELNKGKLSTLLG 307
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+AL+DMY+KCG++ +F + R K++ SWN++IG HG + S+ LF M +
Sbjct: 308 NALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVC 367
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
+E+T + VL+ACSH G V++G F MK +Y ++ + H CVVDML R+G + EA+D
Sbjct: 368 PDEITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARAGLLKEAFD 427
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
+ + + + + C +HG +LA E+ M + + +V+LSN+ A+ GE
Sbjct: 428 FIASMKIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLLSNVYASHGE 487
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVE 528
W AEN+RK+M + V K G S VE
Sbjct: 488 WDGAENVRKLMDDNGVTKTRGSSFVE 513
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 173/549 (31%), Positives = 278/549 (50%), Gaps = 44/549 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C K LR + +HA + + NIF +++ V +Y CG + A VF ++P
Sbjct: 59 VLKACAKLSHLRNSQIIHAHVLKSCFQSNIF-VQTATVDMYVKCGRLEDAHNVFVEMPVR 117
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N M++ A +G MR R + T +++ + + + + V+
Sbjct: 118 DIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVY 177
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE--RDVVSWTSMISGYCNVSK 194
+ ++G DVSV N LI YSKCG LCSA +F + R VVSW SMI+ Y N K
Sbjct: 178 SFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEK 237
Query: 195 VDEAVVLFERMKLEGLEPNQFT-----------------------------------YNA 219
+AV ++ M G P+ T N
Sbjct: 238 HVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNT 297
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+I Y++ GD ++A F+ M+ + V+W MIS +A+ +EA+ LF M +G
Sbjct: 298 LICMYSKCGDVHSARFLFNGMSDK----TCVSWTVMISAYAEKGYMSEAMTLFNAMEAAG 353
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
KP+ VTV ++ G TG++++G+ I GL +V +ALIDMY+KCG DA+
Sbjct: 354 EKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAK 413
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
LF + V SW MI +G V ++ELF MLE GM+ N +T ++VL AC+HGG
Sbjct: 414 ELFYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGG 473
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVE+GLE F M ++YG+ +HY+C+VD+L R G + EA ++++ +P + + A
Sbjct: 474 LVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSAL 533
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ C +HG+ ++ + E+ FE+ + +V ++NI A+ W +R+ MK V+
Sbjct: 534 LSACKLHGKMEMGKYVSEQLFELEPQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVR 593
Query: 520 KQPGFSRVE 528
K PG S ++
Sbjct: 594 KSPGQSIIQ 602
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 203/447 (45%), Gaps = 42/447 (9%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G+ Q A+ F M++ N TF VLKAC L ++ + +HA + F++++ V
Sbjct: 32 GHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHVLKSCFQSNIFVQ 91
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
A +DMY KCG L A VF M RD+ SW +M+ G+ +D L M+L G+
Sbjct: 92 TATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIR 151
Query: 212 PNQFTY-----------------------------------NAIIASYARRGDSNAAFAF 236
P+ T N +IA+Y++ G+ +A
Sbjct: 152 PDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETL 211
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F + + + +V+WN+MI+ +A ++ +A+ +KGML G P+ T+ +L +
Sbjct: 212 FDEINSG--LRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQ 269
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
++ G +H+ ++G DV + LI MYSKCG + AR LF K SW M
Sbjct: 270 PKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVM 329
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I Y + G + ++ LF M G + + VT+++++S C G +E G I + G
Sbjct: 330 ISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWI-DNYSINNG 388
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
+K + ++DM + G +A +L + S C ++G A+ +
Sbjct: 389 LKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMI-TACALNGDVKDALELF 447
Query: 477 EEFFEMGLRKPDGFVMLSNI--CAADG 501
EMG+ KP+ L+ + CA G
Sbjct: 448 FMMLEMGM-KPNHITFLAVLQACAHGG 473
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 130/288 (45%), Gaps = 46/288 (15%)
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------- 217
+W S N A++LF +MK G+ PN T+
Sbjct: 20 TWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHV 79
Query: 218 ------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
A + Y + G A F M V D+ +WNAM+ GFAQS
Sbjct: 80 LKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMP----VRDIASWNAMLLGFAQSGFL 135
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
+ L + M +SGI+P+ VTV ++ + S+ +++ R+G+H+DV + L
Sbjct: 136 DRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTL 195
Query: 326 IDMYSKCGSLKDARTLF-EITR-IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
I YSKCG+L A TLF EI +++V SWN+MI Y ++ ++ ML+ G
Sbjct: 196 IAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSP 255
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
+ T++++LS+C + GL + +GVK+ + CVV+ L
Sbjct: 256 DISTILNLLSSCMQPKALFHGLLV-----HSHGVKLGCDSDVCVVNTL 298
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 12/221 (5%)
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
L TWN+ AL LF+ M SGI PNN T VL+A ++ + IHA
Sbjct: 18 LFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHA 77
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
V + ++F +A +DMY KCG L+DA +F ++++ASWNAM+ + + G +D
Sbjct: 78 HVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDR 137
Query: 369 SIELFERMLEEGMRANEVT-------LISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
L M G+R + VT ++ V S S G + G+ I M +
Sbjct: 138 LSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIA 197
Query: 422 EHYACVVDMLCRSGRMVEAYDL-LRQVPMYVTNSMAGAFRN 461
+ C LC + + + + LR V + NSM A+ N
Sbjct: 198 AYSKC--GNLCSAETLFDEINSGLRSVVSW--NSMIAAYAN 234
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 180/569 (31%), Positives = 285/569 (50%), Gaps = 45/569 (7%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAG 59
M R P+N V L ++ C + G VH L+ + L+ + +L + LV +Y
Sbjct: 204 MMRSGIPVN---VASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGK 260
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
GD+ S+ VF+ + N N + A G ++ + F +M E T S +
Sbjct: 261 FGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSL 320
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
L A V L GK+VH + + E+D+ + N+L+DMY+K G L A +F + R+V
Sbjct: 321 LPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNV 380
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------------- 217
VSW +MI+ EA L M+ G PN FT
Sbjct: 381 VSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAW 440
Query: 218 -------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
NA+I YA+ G + A F R D V++N +I G++QS+
Sbjct: 441 SIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSE-----KDDVSYNTLIVGYSQSQC 495
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
E+L LF+ M +GI+ + V+ G L A + + G+EIH ++ R L+ F ++
Sbjct: 496 CFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANS 555
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+D+Y+K G L A +F K+VASWN MI YG HG +D + ELF+ M ++G+ +
Sbjct: 556 LLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYD 615
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
V+ I+VLSACSHGGLV++G + F M + +K + HYAC+VD+L R+G++ E+ +++
Sbjct: 616 HVSYIAVLSACSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESVEII 674
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+P + + GA C IHG +LA E FE+ + +L N+ + G W+
Sbjct: 675 TNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWN 734
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
EA ++ +MK + VQK P +S V+ N+
Sbjct: 735 EANEIKTLMKSRKVQKNPAYSWVQSGNKL 763
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 144/546 (26%), Positives = 248/546 (45%), Gaps = 70/546 (12%)
Query: 21 GKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
G + + ALR+G + + N L F YA G AR VFD++P ++
Sbjct: 130 GAELHAAALRRGLLLADVFAGNTLVTF---------YAARGRAADARRVFDEMPARDIVS 180
Query: 81 LNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
N +V A G ++A +MR I N + V+ AC D G VH +
Sbjct: 181 WNSLVSALLTNGMLEDAKRAVVGMMRSGI-PVNVASLVSVVPACGTERDEGFGLSVHGLV 239
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
+ G ++ V++GNAL+DMY K G L S+ RVF+GM E++ VSW S + + + ++ +
Sbjct: 240 LKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVL 299
Query: 200 VLFERMKLEGLEPNQFTYNAIIAS-----YARRGDSNAAFAFFSRMTAEGFVP------- 247
+F M + P T ++++ + Y G ++ M ++ F+
Sbjct: 300 EMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMY 359
Query: 248 -------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
++V+WNAMI+ AQ+ E EA L M +G PN+ T+
Sbjct: 360 AKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLV 419
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
+L A S+++G++IHA L D+F +ALID+Y+KCG L A+ +F+ + K
Sbjct: 420 NLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSE-K 478
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+ S+N +I Y + S+ LF++M G+ + V+ + LSAC++ L F
Sbjct: 479 DDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACAN-------LSAF 531
Query: 409 RSMKERYGVKISK---EH---YACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+ KE +GV + + H ++D+ + G + A + ++ S G
Sbjct: 532 KQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMIL-G 590
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDG-------FVMLSNICAADGEWHEAENLRKIMKE 515
+HG+ D+A E F+ L K DG ++ + + C+ G + M
Sbjct: 591 YGMHGQIDVAF----ELFD--LMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIA 644
Query: 516 KNVQKQ 521
+N++ Q
Sbjct: 645 QNIKPQ 650
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 178/404 (44%), Gaps = 47/404 (11%)
Query: 47 FSLKSKLVGVYAGCGDVNSARLVFDKIPNP--NVFMLNWMVMASAFTGNFQEAIGYFSLM 104
L L+ YA D+ SARL+ P + F+ N + A A G EA+ ++ M
Sbjct: 38 LPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRALASAGLPSEALRVYNCM 97
Query: 105 REFIYRCNKFTFSIVLKACVGLLDI-----KKGKQVHAVATQMGFE-NDVSVGNALIDMY 158
R + TF L A + KG ++HA A + G DV GN L+ Y
Sbjct: 98 VRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFY 157
Query: 159 SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY- 217
+ G ARRVF M RD+VSW S++S +++A M G+ N +
Sbjct: 158 AARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLV 217
Query: 218 ----------------------------------NAIIASYARRGDSNAAFAFFSRMTAE 243
NA++ Y + GD ++ F+ M +
Sbjct: 218 SVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEK 277
Query: 244 GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
+ V+WN+ + FA + + L++F+ M + P +VT++ +L A G +G
Sbjct: 278 ----NEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLG 333
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
+E+H R + D+F ++L+DMY+K G L+ A +FE +NV SWNAMI ++
Sbjct: 334 KEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQN 393
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
G + L M + G N TL+++L ACS V+ G +I
Sbjct: 394 GAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQI 437
>gi|302782567|ref|XP_002973057.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
gi|300159658|gb|EFJ26278.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
Length = 531
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 174/538 (32%), Positives = 265/538 (49%), Gaps = 71/538 (13%)
Query: 56 VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNK 113
+Y CG V AR VFD I N + ++W M S++ N EA+ + M + +
Sbjct: 1 MYGKCGSVEEARKVFDGIKNRDA--VSWTSMISSYANNGFCDEALDLYQQMDADGIQPDS 58
Query: 114 FTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
TF+ L AC L D GK +HA E+D VG+ALI+MY++CG + SAR+ F
Sbjct: 59 ITFTSALLACTKLAD---GKAIHARIVSSNMESDF-VGSALINMYARCGDVSSARQAFEK 114
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------- 217
+ + VV WTS+++ Y EA+ L+ RM EG+ + TY
Sbjct: 115 IQNKHVVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEG 174
Query: 218 ------------------NAIIASYARRGDSNAAFAFFSRMTAEGFV------------- 246
A++ YA+ G+ +AA A F+R+ + V
Sbjct: 175 KAIHLRVSECGFQSLVVHTALLTMYAKCGELDAARAVFNRLASNVAVQNALVTMYAKCGS 234
Query: 247 -------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
DLV+WNAMI +AQ EAL L++ M G+ P+ VT+ L A
Sbjct: 235 LELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSA 294
Query: 294 GGLTGSIQIGREIHALVCR-MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
++GS+Q+GREIH+ V + + +AL++MY +CG L+ AR++FE ++V S
Sbjct: 295 CAISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLS 354
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
W AM Y + G D ++L+ M+ G+R NE+T S+L CSH GL+ +G+E F M+
Sbjct: 355 WTAMTSVYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQ 414
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG-AFRNGCNIHGRRDL 471
+ V +EH+ C+VD+L RSGR+ +A L+ +P Y +S+A C H D
Sbjct: 415 SEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMP-YQPDSVAWLTVLGSCKTHSDADT 473
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEK 529
A E+ + +LS+I A G EA ++ MKE ++K PG S +EK
Sbjct: 474 AKRAARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIEK 531
>gi|357461849|ref|XP_003601206.1| hypothetical protein MTR_3g077200 [Medicago truncatula]
gi|355490254|gb|AES71457.1| hypothetical protein MTR_3g077200 [Medicago truncatula]
Length = 553
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 273/538 (50%), Gaps = 41/538 (7%)
Query: 27 KALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
K+L + KQ+HA L L+ ++++ +YA +N A VFDK +VF+ N M+
Sbjct: 17 KSLLRVKQLHACLLKTHLSKDPFYATQIIRLYAFNNHINYAHHVFDKTSTRSVFLWNSMI 76
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
A A F AI F M R + +T++ ++AC D + VH A +G
Sbjct: 77 RAFAKARRFSNAISLFRTMLVDDIRPDNYTYACAIRACADSFDFGMLRVVHGSAVSVGLG 136
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
D +AL+ YSK G++ ARRVF G+ E D+V W S+IS Y + + +F M
Sbjct: 137 LDPICCSALVSAYSKLGVVHEARRVFDGIVEPDLVLWNSLISAYGGSGMWEIGIQMFSSM 196
Query: 206 KLEGLEPNQFTY-----------------------------------NAIIASYARRGDS 230
+L G +P+ FT + +++ Y+R
Sbjct: 197 RLAGKKPDGFTLAGLLGGIADSSLLSIGQELHGLSQKSGLDSDCHVGSLLVSMYSRCKCI 256
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
++A+ F + F PDLVTW+A+ISG++Q +AL F+ + + K ++V + V
Sbjct: 257 DSAYRVFCGI----FNPDLVTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDSVLIATV 312
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L + ++ G EIH V R GL DV SALIDMYSKCG L +F I +N+
Sbjct: 313 LASITQMANVLPGCEIHGYVLRHGLESDVKVSSALIDMYSKCGFLHLGTCVFRIMLERNI 372
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
S+N+MI YG HG + +F+ ML++G+ +E T ++LSAC H GLV+ G E+F
Sbjct: 373 ISYNSMILAYGLHGCASQAFTMFDEMLQKGLVPDEGTFSALLSACCHAGLVKDGRELFWR 432
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
MK+ + +K EHY +V +L G + EAY+L + +P V ++ GA + C+ +G +
Sbjct: 433 MKDEFNIKARPEHYVYMVKLLGGVGELEEAYNLTQSLPKPVDKAILGALLSCCDSYGNSE 492
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
LA T+ ++ F+ VMLSNI A DG W + + LR M +K G S +E
Sbjct: 493 LAETVAQQIFKSNPADNVYRVMLSNIYAGDGRWDDVKKLRDKMVGGQ-KKMRGVSWIE 549
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 176/553 (31%), Positives = 275/553 (49%), Gaps = 37/553 (6%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGD 62
R I +N S N LL S +L + + + D +++ ++ +A G
Sbjct: 93 RAIPRPDNYSYN---TLLHALAVSSSLADARGLFDEMPVRDSVTYNV---MISSHANHGL 146
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF-IYRCNKFTFSIV-- 119
V+ AR FD P + N M+ A G +EA G F+ E+ + N V
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQW 206
Query: 120 --LKACVGLLDIKKGKQV--------------HAVATQMGFE----NDVSVGNALIDMYS 159
+ L D G+ V V + F+ DV A++ Y+
Sbjct: 207 GKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYA 266
Query: 160 KCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNA 219
+ G+L ARRVF M ER+ VSW +M++ Y +DEA LF M N ++N
Sbjct: 267 QNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWNT 322
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YA+ G A A F M + D V+W AM++ ++Q E L+LF M G
Sbjct: 323 MLTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCG 378
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
N VL +++ G ++H + R G + F G+AL+ MY KCG+++DAR
Sbjct: 379 EWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDAR 438
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
FE ++V SWN MI Y +HG ++E+F+ M + +++TL+ VL+ACSH G
Sbjct: 439 NAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 498
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVEKG+ F SM +GV EHY C++D+L R+GR+ EA+DL++ +P ++M GA
Sbjct: 499 LVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGAL 558
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
IH +L + E+ FE+ +V+LSNI A+ G+W +A +R +M+E+ V+
Sbjct: 559 LGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVK 618
Query: 520 KQPGFSRVEKRNE 532
K PGFS +E +N+
Sbjct: 619 KVPGFSWIEVQNK 631
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 174/371 (46%), Gaps = 25/371 (6%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
S + ++ Y+ G + A +F IP P+ + N ++ A A + + +A G F M
Sbjct: 70 STYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMP-- 127
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
+ + I A GL+ + + + E D N ++ Y + G + A
Sbjct: 128 VRDSVTYNVMISSHANHGLVSLARHY------FDLAPEKDAVSWNGMLAAYVRNGRVEEA 181
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR 227
R +F+ E DV+SW +++SGY K+ EA LF+RM + ++N +++ YARR
Sbjct: 182 RGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDV----VSWNIMVSGYARR 237
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
GD A F V D+ TW A++SG+AQ+ EA ++F M N V
Sbjct: 238 GDMVEARRLFDAAP----VRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMV 293
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
+Q + + ++ + + CR +V + + ++ Y++ G L++A+ +F+
Sbjct: 294 AAYIQRRMMDEAKEL---FNMMPCR-----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQ 345
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
K+ SW AM+ Y + G + +++LF M G N VLS C+ +E G+++
Sbjct: 346 KDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQL 405
Query: 408 F-RSMKERYGV 417
R ++ YGV
Sbjct: 406 HGRLIRAGYGV 416
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 150/362 (41%), Gaps = 82/362 (22%)
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
E +V N I + + G + A R+F M R ++ +M++GY ++ A LF
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP---------------- 247
+ P+ ++YN ++ + A A F M V
Sbjct: 94 AIP----RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149
Query: 248 -----------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
D V+WN M++ + ++ R EA LF + N ++G +Q G +
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209
Query: 297 TGSIQI-----GREIHAL------VCRMGLHI------------DVFTGSALIDMYSKCG 333
+ + ++ GR++ + R G + DVFT +A++ Y++ G
Sbjct: 210 SEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNG 269
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER------------------ 375
L++AR +F+ +N SWNAM+ Y + M+D + ELF
Sbjct: 270 MLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQ 329
Query: 376 --MLEEGM-------RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
MLEE + + V+ ++L+A S GG E+ L++F M R G +++ +AC
Sbjct: 330 AGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMG-RCGEWVNRSAFAC 388
Query: 427 VV 428
V+
Sbjct: 389 VL 390
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 285/546 (52%), Gaps = 35/546 (6%)
Query: 20 LGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C ++ G+ +HA +L +N + + L+ +YA CG + A VF + +
Sbjct: 258 LQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDC 317
Query: 79 FMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++W + S N + +AI +F M++ + ++ + ++ A ++ G +VH
Sbjct: 318 --VSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVH 375
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A A + G ++++ +GN+LIDMY KC + F M E+D++SWT++I+GY
Sbjct: 376 AYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHL 435
Query: 197 EAVVLFERMKLEGLEPNQFTYNAI---------------IASYARRGD------SNA--- 232
+A+ L +++LE ++ + +I I Y +G NA
Sbjct: 436 DALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVN 495
Query: 233 -----AFAFFSRMTAEGF-VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
A ++R E D+V+W +MI+ + EAL+LF ++ + I+P+ +T
Sbjct: 496 VYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLIT 555
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ VL A S++ G+EIH + R G ++ ++L+DMY++CG++++AR +F +
Sbjct: 556 LVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVK 615
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+++ W +MI G HG +I+LF +M +E + + +T +++L ACSH GLV +G +
Sbjct: 616 QRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQ 675
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F MK Y ++ EHYAC+VD+L RS + EAY +R +P+ + + A C IH
Sbjct: 676 HFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIH 735
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
DL ++ ++ +V++SN AADG W++ E +R IMK ++K+PG S
Sbjct: 736 SNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSW 795
Query: 527 VEKRNE 532
+E N+
Sbjct: 796 IEVENK 801
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 213/433 (49%), Gaps = 50/433 (11%)
Query: 23 CMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
C KAL QG+Q+HA L N L+ L +K V +Y CG A VFDK+ +F
Sbjct: 56 CASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFT 115
Query: 81 LNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVAT 140
N M+ A G + EAI + MR + FTF VLKAC + + G ++H VA
Sbjct: 116 WNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAV 175
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFH-GMFER-DVVSWTSMISGYCNVSKVDEA 198
+ G+ V V NALI MY+KCG L AR +F G+ E+ D VSW S+IS + + EA
Sbjct: 176 KCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEA 235
Query: 199 VVLFERMKLEGLEPNQFTY-----------------------------------NAIIAS 223
+ LF RM+ G+E N +T+ NA+IA
Sbjct: 236 LSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAM 295
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
YA G A F M D V+WN ++SG Q+ ++A+ F+ M SG KP+
Sbjct: 296 YANCGQMEDAERVFKSM----LFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPD 351
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
V+V ++ A G + ++ G E+HA + G+ ++ G++LIDMY KC +K + FE
Sbjct: 352 QVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFE 411
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
K++ SW +I Y ++ ++ L ++ E M + + + S+L ACS
Sbjct: 412 YMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACS------- 464
Query: 404 GLEIFRSMKERYG 416
GL+ + +KE +G
Sbjct: 465 GLKSEKLIKEIHG 477
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 153/546 (28%), Positives = 259/546 (47%), Gaps = 49/546 (8%)
Query: 18 CLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C+L C K R G ++H A+ C +F + L+ +YA CGD+ AR++FD
Sbjct: 153 CVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNA-LIAMYAKCGDLGGARVLFDSGLM 211
Query: 76 PNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
++W + SA G + EA+ F M+E N +TF L+AC G IK G+
Sbjct: 212 EKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGR 271
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+HAV + DV V NALI MY+ CG + A RVF M +D VSW +++SG
Sbjct: 272 GIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQND 331
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEG--------- 244
+A+ F+ M+ G +P+Q + +IA+ R + A + G
Sbjct: 332 MYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGN 391
Query: 245 --------------------FVP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
++P DL++W +I+G+AQ++ +AL L + + + +
Sbjct: 392 SLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDV 451
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ + + +L A S ++ +EIH V + GL D+ +A++++Y + + AR +F
Sbjct: 452 DPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVF 510
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E K++ SW +MI C +G+ ++ELF ++E + + +TL+SVL A + ++
Sbjct: 511 ESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLK 570
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
KG EI R G + +VDM R G M A ++ ++Q + + SM A
Sbjct: 571 KGKEI-HGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINA- 628
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMK-EK 516
NG +HG A+ + + + + PD F+ L C+ G E + +IMK E
Sbjct: 629 -NG--MHGCGKDAIDLFSKMTDENVL-PDHITFLALLYACSHSGLVVEGKQHFEIMKNEY 684
Query: 517 NVQKQP 522
++ P
Sbjct: 685 KLEPWP 690
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 259/511 (50%), Gaps = 36/511 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
L+ YA + A +VFD++P ++ N ++ A G + +A+ F M +
Sbjct: 25 LISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELD 84
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
T V+ ACV G VH + + G ++ S+GNAL+DMYS C S ++F
Sbjct: 85 STTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFR 144
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RR 227
M +++VVSWT+MI+ Y D+ LF+ M LEG+ P+ F + + ++A +
Sbjct: 145 NMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKH 204
Query: 228 GDSNAAFAFFSRMTAEGFVP----------------------------DLVTWNAMISGF 259
G S +A R E +P D ++WN +I G+
Sbjct: 205 GKSVHGYAI--RNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGY 262
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
++S NEA LF ML+ ++PN VT+ +L A S++ GRE+HA R G D
Sbjct: 263 SRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDN 321
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
F +AL+DMY KCG+L AR LF++ KN+ SW MI YG HG +I LFE+M
Sbjct: 322 FVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGS 381
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G++ + + ++L ACSH GL ++G F +M+ + ++ +HYAC+VD+LC +G + E
Sbjct: 382 GIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKE 441
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
AY+ + +P+ +S+ + GC IH LA + E FE+ +V+L+NI A
Sbjct: 442 AYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAE 501
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
W L+ + + +++ G S +E R
Sbjct: 502 AERWEAVRKLKNKVGGRGLRENTGCSWIEVR 532
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 186/410 (45%), Gaps = 51/410 (12%)
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G VH + GF +V NALI Y+K + A VF M +RD++SW S+I G +
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY---------------------------------- 217
D+AV LF RM LEG E + T
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122
Query: 218 -NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
NA++ Y+ D + F M + ++V+W AMI+ + ++ ++ LF+ M
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQK----NVVSWTAMITSYTRAGHFDKVAGLFQEMG 178
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+ GI+P+ +T L A S++ G+ +H R G+ + +AL++MY KCG ++
Sbjct: 179 LEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYME 238
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
+AR +F+ K+ SWN +IG Y + + + + LF ML + +R N VT+ +L A +
Sbjct: 239 EARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAA 297
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTN 453
+E+G E+ + R G +VDM + G ++ A +D+L +
Sbjct: 298 SLSSLERGREM-HAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWT 356
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNICAADG 501
M G +HGR A+ + E+ G+ +PD F + C+ G
Sbjct: 357 IMIA----GYGMHGRGRDAIALFEQMKGSGI-QPDAGSFSAILYACSHSG 401
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 188/413 (45%), Gaps = 45/413 (10%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCG 61
R+ L L ++ C++S G VH + T ++ SL + L+ +Y+ C
Sbjct: 75 RMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCS 134
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIV 119
D S +F + NV ++W M +++T G+F + G F M R + F +
Sbjct: 135 DWRSTNKIFRNMEQKNV--VSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSA 192
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
L A G +K GK VH A + G E + V NAL++MY KCG + AR +F + ++D
Sbjct: 193 LDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDT 252
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAF 234
+SW ++I GY + +EA LF M L+ L PN T I+ + A RG A+
Sbjct: 253 ISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAY 311
Query: 235 AFFSRMTAEGFVP--------------------------DLVTWNAMISGFAQSKRENEA 268
A + FV +L++W MI+G+ R +A
Sbjct: 312 AVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDA 371
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALID 327
+ LF+ M SGI+P+ + + +L A +G G R +A+ + + + ++D
Sbjct: 372 IALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVD 431
Query: 328 MYSKCGSLKDARTLFEITRIKNVAS-WNAMI-GCYGKHGMVDSSIELFERMLE 378
+ G+LK+A E I+ +S W +++ GC + +++L E++ E
Sbjct: 432 LLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGC-----RIHRNVKLAEKVAE 479
>gi|302801049|ref|XP_002982281.1| hypothetical protein SELMODRAFT_116350 [Selaginella moellendorffii]
gi|300149873|gb|EFJ16526.1| hypothetical protein SELMODRAFT_116350 [Selaginella moellendorffii]
Length = 515
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 164/489 (33%), Positives = 262/489 (53%), Gaps = 12/489 (2%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
L +L C L+ GK VHA + + L + LV +YA CG V AR VF++I N
Sbjct: 7 LSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGISLVNMYAKCGTVGEARKVFERINN 66
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+ + N M+ A + EA+ F M+ ++ TF VL ACV D++ G+ +
Sbjct: 67 RSRILWNSMITAYQ-ERDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTI 125
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H GF DV V AL +MY+KCG L AR VF M RDVVSW +MI+ Y
Sbjct: 126 HRRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDG 185
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYA--------RRGDSNAAFAFFSRMTAEGFVP 247
+ A+ L M+LEG+ P++ T+ +++ + + R+ S FS ++
Sbjct: 186 EGAISLCWAMQLEGMRPDKATFASLLNACSDPNRLVDGRQIHSEIFDNIFS--NSQQHHR 243
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
DL W +MI+ + Q +AL+L++ M ++ + VT VL A ++ G+ IH
Sbjct: 244 DLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIH 303
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
A V R GL DV ++++ MY KCGS +A +FE T+ K+++ W A+I Y +HG +
Sbjct: 304 ARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTALIASYARHGHGE 363
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
++ +F R+ ++G+ + +T +++LSACSH GL+E+G E F SM E G++ + EHY+C+
Sbjct: 364 QALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMAE-LGIEPNMEHYSCL 422
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
VD+L R+G + A + L ++P+ + A C +HG + A + E+ +
Sbjct: 423 VDLLARAGHLHTAEEFLSRMPVAANTIVLTALLAACRVHGDVERARRVAEKLEALDPESE 482
Query: 488 DGFVMLSNI 496
+V LSNI
Sbjct: 483 APYVTLSNI 491
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 173/586 (29%), Positives = 294/586 (50%), Gaps = 69/586 (11%)
Query: 27 KALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAG--CGDVNSARLVFDKIPNPNVFMLNW 83
K++ Q KQ+H+ +CT ++ + ++++ GD+ AR+VFD +P PN F+ N
Sbjct: 30 KSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNN 89
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
M+ + G A+ + M E +++T+ +LK +K G+++H ++G
Sbjct: 90 MIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLG 149
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
F ++V V NALI +YS G + AR VF + DVV+W MISGY + DE++ LF+
Sbjct: 150 FSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFD 209
Query: 204 RM--------------------KLEGL---------------EPNQFTYNAIIASYARRG 228
M KL+ L EP + NA+I YA G
Sbjct: 210 EMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACG 269
Query: 229 DSNAAFAFFSRMTAEGFVP---------------------------DLVTWNAMISGFAQ 261
D + A F M + + D V+W AMI G+ Q
Sbjct: 270 DMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQ 329
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
R E L LF+ M + IKP+ T+ +L A G++++G I A + + + ID F
Sbjct: 330 VNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFV 389
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
G+ALIDMY CG+++ A +F ++ SW A+I +G + ++++F +ML+ +
Sbjct: 390 GNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASI 449
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
+EVT I VL AC+H G+V+KG + F M ++G++ + HY C+VD+L R+G + EA+
Sbjct: 450 TPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAH 509
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
++++ +P+ + + G+ C +H ++A ++ E+ +V+L NI AA
Sbjct: 510 EVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACN 569
Query: 502 EWHEAENLRKIMKEKNVQKQPGFSRVEKR---NEFVE-KEVQNESK 543
W + +RK+M ++ ++K PG S +E +EFV +V +SK
Sbjct: 570 RWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSK 615
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 166/356 (46%), Gaps = 55/356 (15%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C K K L GK+VH + DL I L++ L+ +YA CGD+++A +FD + +
Sbjct: 226 VLSACSKLKDLNVGKRVHRYV--KDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKS 283
Query: 76 PNVFMLNWMVMASAFT---------------------------------GNFQEAIGYFS 102
+V ++W + + FT F+E + F
Sbjct: 284 RDV--ISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFR 341
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M+ + ++FT +L AC L ++ G+ + A + + D VGNALIDMY CG
Sbjct: 342 EMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCG 401
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
+ A R+F+ M RD +SWT++I G +EA+ +F +M + P++ T ++
Sbjct: 402 NVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLC 461
Query: 223 SYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ G + FF+RMT + G P++ + M+ ++ EA ++ K M V K
Sbjct: 462 ACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPV---K 518
Query: 282 PNNVTVTGVLQAGGLTGSIQIGR--EIHALVCRMGLHIDVFTGSA---LIDMYSKC 332
PN++ G L G+ ++ R E+ + + L ++ G+ L ++Y+ C
Sbjct: 519 PNSIV------WGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAAC 568
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 178/562 (31%), Positives = 288/562 (51%), Gaps = 48/562 (8%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVF 70
+V+ L + C A+ +G ++H + + L+I S+++ L+ +YA D+ A +F
Sbjct: 149 NVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELF 207
Query: 71 DKIPNPNVFMLNWMVMASAF--TGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLL 127
D++ +V ++W VM + TG + A+ F + + T VLKAC
Sbjct: 208 DEMCERDV--ISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTG 265
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
DI G+ VH V G + D+ VGN++IDMYSKC SA + F+ M R+ VSW S+IS
Sbjct: 266 DISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIIS 325
Query: 188 GYCNVSKVDEAVVLFERMKLEGL-----------------------------------EP 212
G K EA+ LF M G E
Sbjct: 326 GLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYEL 385
Query: 213 NQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLF 272
N+F N++I +Y++ A+ F R+ + D V+W+AMI+GF + +EA+ LF
Sbjct: 386 NEFVINSLIDAYSKCDLIELAWKLFDRLKTK----DTVSWSAMIAGFNHCGKPDEAIALF 441
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
+ M + KPN VT+ +L+A ++ ++ + H + R GL +V G+A++DMY+KC
Sbjct: 442 QEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKC 501
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G + +R F+ KN+ SW AMI G +G+ ++ L M G++ N VT +SVL
Sbjct: 502 GEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVL 561
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP--MY 450
SACSHGGLVE+GL F +M + +GV+ EHY+C+VDML R+G++ A +L+ ++P M
Sbjct: 562 SACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMR 621
Query: 451 VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR 510
+ GA + C G L E+ + G+ + S++ AA G W +A +R
Sbjct: 622 DGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMR 681
Query: 511 KIMKEKNVQKQPGFSRVEKRNE 532
++K + V+ G+S V ++
Sbjct: 682 WLVKARGVRVVAGYSLVHVEDK 703
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 236/519 (45%), Gaps = 55/519 (10%)
Query: 22 KCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
K S +R GK +HA L + + S + ++ Y G ++SA VFD + + +
Sbjct: 58 KACSSLPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVS 117
Query: 81 LNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVAT 140
N M+ G + + +F R + N T + + AC L +++G ++H
Sbjct: 118 WNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYII 177
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ GF + SV N+L+ MY+ + A +F M ERDV+SW+ MI GY + A+
Sbjct: 178 RSGFLDIPSVQNSLLSMYADNDME-RAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQ 236
Query: 201 LFERMK------------------------------------LEGLEPNQFTYNAIIASY 224
LF M GL+ + F N+II Y
Sbjct: 237 LFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMY 296
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
++ D +AF F+ M + V+WN++ISG ++++ +EAL LF M +G + +
Sbjct: 297 SKCDDHESAFKAFNEMPCR----NTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADE 352
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
VT+ +LQ+ + IH++V R G ++ F ++LID YSKC ++ A LF+
Sbjct: 353 VTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDR 412
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK- 403
+ K+ SW+AMI + G D +I LF+ M + + N VT++S+L A S +++
Sbjct: 413 LKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRS 472
Query: 404 ----GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
G+ I R + V + ++DM + G + + Q+P S GA
Sbjct: 473 KWAHGIAIRRGLAAEVAVGTA------ILDMYAKCGEIGLSRKAFDQIPEKNIVSW-GAM 525
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
C ++G A+ + E GL KP+ LS + A
Sbjct: 526 IAACGMNGLARDALALLSEMKLHGL-KPNVVTTLSVLSA 563
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 194/408 (47%), Gaps = 37/408 (9%)
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+LKAC L ++ GK +HA + GF++ S GN+++D Y K G L SA VF M RD
Sbjct: 56 ILKACSSL-PVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRD 114
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
VSW MI G+ + D+ + F + ++ EPN T I + G
Sbjct: 115 SVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHG 174
Query: 239 RMTAEGF--VP----------------------------DLVTWNAMISGFAQSKRENEA 268
+ GF +P D+++W+ MI G+ Q+ A
Sbjct: 175 YIIRSGFLDIPSVQNSLLSMYADNDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMA 234
Query: 269 LKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
L+LF M + I+ + +T+ VL+A TG I +GR +H +V GL D+F G+++ID
Sbjct: 235 LQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIID 294
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MYSKC + A F +N SWN++I + ++ LF M + G RA+EVT
Sbjct: 295 MYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVT 354
Query: 388 LISVLSACSHGGLVEK-GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
L+++L +C + V+ + S+ R+G ++++ ++D + + A+ L +
Sbjct: 355 LVNLLQSCKY--FVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDR 412
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
+ T S + A G N G+ D A+ + +E KP+G +LS
Sbjct: 413 LKTKDTVSWS-AMIAGFNHCGKPDEAIALFQE-MNQAQEKPNGVTILS 458
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 2/171 (1%)
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKREN--EALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
R P L WN I K + EA + M +G + + T+ +
Sbjct: 2 RFPTTPLAPKLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACS 61
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+ ++ G+ IHA + + G TG++++D Y K G+L A +F+ R ++ SWN M
Sbjct: 62 SLPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIM 121
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
I + G D + F + N TL+ + AC G +E+GL++
Sbjct: 122 IHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKM 172
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 165/537 (30%), Positives = 266/537 (49%), Gaps = 39/537 (7%)
Query: 27 KALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+AL +G ++H ++ ++ + ++ +YA CG+V++A+ +F +I ++ + ++
Sbjct: 2 RALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAII 61
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
A +G QEA+ F M+ + NK L AC + +K GK +H A + +
Sbjct: 62 AAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVD 121
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
D+SVG AL+ MY+KCG A +F+ M +DVV+W +MI+GY + + A+ +F ++
Sbjct: 122 LDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKL 181
Query: 206 KLEGLEPNQFTY-----------------------------------NAIIASYARRGDS 230
+L L PN T A+I YA+ G
Sbjct: 182 QLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSL 241
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+ A F R G D V+WN MI+G+ S +A F M + I+PN VT+ V
Sbjct: 242 SGAEFLFHR---TGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTV 298
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A +++ G +HA V RMG G+ LIDMY+KCG L + +F + K+
Sbjct: 299 LPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDT 358
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SWN M+ Y HG +IELF RM + +R + + I+VLSAC H GL+ +G +IF S
Sbjct: 359 VSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDS 418
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M +++ ++ EHYAC+ D+L R+G E DL++ +PM + GA +H
Sbjct: 419 MSKQHQLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQ 478
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
LA ++ + + LSN A G W + N R + + ++K PG+S V
Sbjct: 479 LAEFALHHLDKLEHKNLTHYAALSNTYARSGRWADVGNTRSKITKTGLRKSPGYSWV 535
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 277/547 (50%), Gaps = 50/547 (9%)
Query: 29 LRQGKQVHALLCTNDLNIF--SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
L++G++VH + T L F + + LV +YA CG + AR VF + + + N M+
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
G F EA+ + MR FT L +C L K G+Q+H + ++G +
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 448
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK-VDEAVVLFERM 205
+VSV NAL+ +Y++ G L R++F M E D VSW S+I + + EAVV F
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 206 KLEGLEPNQFTY-----------------------------------NAIIASYARRGDS 230
+ G + N+ T+ NA+IA Y + G+
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+ FSRM D VTWN+MISG+ ++ +AL L ML +G + ++ V
Sbjct: 569 DGCEKIFSRMAER---RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 625
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A +++ G E+HA R L DV GSAL+DMYSKCG L A F ++N
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 685
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMR-ANEVTLISVLSACSHGGLVEKGLEIFR 409
SWN+MI Y +HG + +++LFE M +G + VT + VLSACSH GL+E+G + F
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFE 745
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM----YVTNSMAGAFRNGCNI 465
SM + YG+ EH++C+ D+L R+G + + D + ++PM + ++ GA C
Sbjct: 746 SMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC---CRA 802
Query: 466 HGRR-DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
+GR+ +L E F++ +V+L N+ AA G W + RK MK+ +V+K+ G+
Sbjct: 803 NGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGY 862
Query: 525 SRVEKRN 531
S V ++
Sbjct: 863 SWVTMKD 869
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 221/475 (46%), Gaps = 58/475 (12%)
Query: 36 HALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT-- 91
H+ L N D +++ L + L+ Y GD SAR VFD++P N ++W + S ++
Sbjct: 24 HSRLYKNRLDKDVY-LCNNLINAYLETGDSVSARKVFDEMPLRNC--VSWACIVSGYSRN 80
Query: 92 GNFQEAIGYF-SLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHAVATQMGFENDV 148
G +EA+ + +++E I+ N++ F VL+AC +G + I G+Q+H + ++ + D
Sbjct: 81 GEHKEALVFLRDMVKEGIFS-NQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 149 SVGNALIDMYSKC-GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V N LI MY KC G + A F + ++ VSW S+IS Y A +F M+
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAF--AFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
+G P ++T+ +++ + + + + G + DL + ++S FA+S
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 266 NEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGS------------------------- 299
+ A K+F M + + N + V V Q G +
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFP 319
Query: 300 ---------IQIGREIHALVCRMGLHID--VFTGSALIDMYSKCGSLKDARTLFEITRIK 348
++ GRE+H V GL +D V G+ L++MY+KCGS+ DAR +F K
Sbjct: 320 EYSLAEEVGLKKGREVHGHVITTGL-VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+ SWN+MI ++G ++E ++ M + TLIS LS+C+ + G +I
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 409 -RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT---NSMAGAF 459
S+K G+ ++ ++ + +G + E + +P + NS+ GA
Sbjct: 439 GESLK--LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGAL 491
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 173/402 (43%), Gaps = 49/402 (12%)
Query: 32 GKQVHALLCTNDLNIFSLKSK-LVGVYAGC-GDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G+Q+H L+ + ++ S L+ +Y C G V A F I N N ++ +
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTF-SIVLKAC-VGLLDIKKGKQVHAVATQMGFEND 147
G+ + A FS M+ R ++TF S+V AC + D++ +Q+ + G D
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM-K 206
+ VG+ L+ ++K G L AR+VF+ M R+ V+ ++ G +EA LF M
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 207 LEGLEPNQFTY---------------------------------------NAIIASYARR 227
+ + P + N ++ YA+
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
G A F MT + D V+WN+MI+G Q+ EA++ +K M I P + T+
Sbjct: 363 GSIADARRVFYFMTDK----DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTL 418
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
L + ++G++IH ++G+ ++V +AL+ +Y++ G L + R +F
Sbjct: 419 ISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
Query: 348 KNVASWNAMIGCYGK-HGMVDSSIELFERMLEEGMRANEVTL 388
+ SWN++IG + + ++ F G + N +T
Sbjct: 479 HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 35/204 (17%)
Query: 228 GDSNAAFAFFSRMTAEGFVPDL-------------------------------VTWNAMI 256
G AA F SR+ D+ V+W ++
Sbjct: 15 GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIV 74
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI--GREIHALVCRMG 314
SG++++ EAL + M+ GI N VL+A GS+ I GR+IH L+ ++
Sbjct: 75 SGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLS 134
Query: 315 LHIDVFTGSALIDMYSKC-GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
+D + LI MY KC GS+ A F +KN SWN++I Y + G S+ +F
Sbjct: 135 YAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIF 194
Query: 374 ERMLEEGMRANEVTLIS-VLSACS 396
M +G R E T S V +ACS
Sbjct: 195 SSMQYDGSRPTEYTFGSLVTTACS 218
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 303 GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGK 362
R H+ + + L DV+ + LI+ Y + G AR +F+ ++N SW ++ Y +
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 363 HGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
+G ++ M++EG+ +N+ +SVL AC G V
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 161/516 (31%), Positives = 259/516 (50%), Gaps = 40/516 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
LV Y + A +F + N + N ++ + G +EAI F + + +
Sbjct: 181 LVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPS 240
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
FTF+ +L A VGL D K G+QVH + F +V VGNAL+D YSK + ++F+
Sbjct: 241 DFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFY 300
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------- 217
M E D +S+ +I+ Y + E+ LF +++ + QF +
Sbjct: 301 EMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRM 360
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
NA++ YA+ A F + + VP W AMIS
Sbjct: 361 GRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVP----WTAMIS 416
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
+ Q + E + +F M +G+ + T +L+A SI +GR++H+L+ R G
Sbjct: 417 AYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMS 476
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
+V++GSAL+D Y+KCG + DA F +N SWNA+I Y ++G VD ++ F++M+
Sbjct: 477 NVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMI 536
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
+ G + + V+ +SVLSACSH G VE+ L F SM + Y V +EHY +VD+LCR+GR
Sbjct: 537 QSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRF 596
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM-GLRKPDGFVMLSNI 496
EA L+ ++P + M + N C IH +LA + F M LR ++ +SNI
Sbjct: 597 DEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNI 656
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
A G+W ++K M+++ V+K P +S VE +++
Sbjct: 657 YAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQ 692
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/510 (23%), Positives = 234/510 (45%), Gaps = 50/510 (9%)
Query: 29 LRQGKQVHALLCTNDL---NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
L +G VHA + + N SL + G + G ++ AR +FD + ++W +
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISLNMMISG-HLKFGKLSKARELFDGMVERTA--VSWTI 110
Query: 86 MASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQVHAVATQM 142
+ + + Q EA ++ MR + T + L + G L+ K Q+H ++
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL-VTLLSGFGELETKNVIVQIHTHVIKL 169
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G+E ++ V N+L+D Y K L A ++F M +D V++ S+++GY N +EA+ LF
Sbjct: 170 GYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF 229
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDS----------------------NAAFAFFSRM 240
+ G++P+ FT+ A++++ D+ NA ++S+
Sbjct: 230 LELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKH 289
Query: 241 TAEGFV-------PDL--VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
V P+L +++N +I+ +A + + E+ LF+ + + +L
Sbjct: 290 DQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLL 349
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
+ ++++GR+IH +G + + +AL+DMY+KC K+A+ +F+ K+
Sbjct: 350 SIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTV 409
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
W AMI Y + G + I +F M G+ A++ T S+L AC++ + G ++ S+
Sbjct: 410 PWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL-HSL 468
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT---NSMAGAFRNGCNIHGR 468
R G + + ++D + G M +A ++P + N++ A+ N+ G
Sbjct: 469 LIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDG- 527
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+ ++ + G KPD LS + A
Sbjct: 528 ---TLNSFQQMIQSGY-KPDSVSFLSVLSA 553
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 172/368 (46%), Gaps = 40/368 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL S LR G+Q+H T N S +++ LV +YA C A+ +FD I +
Sbjct: 348 LLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKS 407
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+ W M SA+ G +E I FS MR ++ TF+ +L+AC L I G+Q+
Sbjct: 408 T--VPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL 465
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H++ + GF ++V G+AL+D Y+KCG + A + F M ER+ VSW ++IS Y V
Sbjct: 466 HSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNV 525
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA-EGFVPDLVTWNA 254
D + F++M G +P+ ++ +++++ + G A F+ MT P + +
Sbjct: 526 DGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTS 585
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M+ ++ R +EA KL M +P+ + + VL + CR+
Sbjct: 586 MVDVLCRNGRFDEAEKLMTEM---PFEPSEIMWSSVLNS-----------------CRIH 625
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+ ++ + K A LF + +++ A + M Y G D+ ++ +
Sbjct: 626 KNHEL--------------AKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKK 671
Query: 375 RMLEEGMR 382
M + G+R
Sbjct: 672 AMRDRGVR 679
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 186/390 (47%), Gaps = 19/390 (4%)
Query: 32 GKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G+QVH + + N+F + + L+ Y+ V+ +F ++P + N ++ + A
Sbjct: 260 GQQVHGFVLKTNFVWNVF-VGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYA 318
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
+ G F+E+ F ++ + +F F+ +L L+++ G+Q+H A +G +
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
V NAL+DMY+KC A+++F + + V WT+MIS Y K +E + +F M+ G
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
+ +Q T+ +I+ + A + S + GF+ ++ + +A++ +A+ +A+
Sbjct: 439 VPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAI 498
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
K F M N ++ Q G + G++ +++ + G D + +++
Sbjct: 499 KSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQM----IQSGYKPDSVSFLSVLSAC 554
Query: 330 SKCGSLKDARTLF-EITRIKNVAS----WNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
S CG +++A F +T+I V + +M+ ++G D + +L M E +
Sbjct: 555 SHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKL---MTEMPFEPS 611
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKER 414
E+ SVL++C + K E+ + +R
Sbjct: 612 EIMWSSVLNSCR----IHKNHELAKKAADR 637
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 170/442 (38%), Gaps = 98/442 (22%)
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
YR F ++ + + + A + GF + N ++ + + G L A
Sbjct: 4 YRATLFQNLVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAH 63
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
+VF M ++ +S MISG+ K+ +A LF+ M +E ++ +I Y +
Sbjct: 64 QVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGM----VERTAVSWTILIGGYLQSN 119
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
S AF ++ M G PD VT ++SGF + ++ NV V
Sbjct: 120 QSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGE------------------LETKNVIV- 160
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
+IH V ++G ++ ++L+D Y K L A LF+ K
Sbjct: 161 ----------------QIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNK 204
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC-----------SH 397
+ ++N+++ Y G+ + +IELF + G++ ++ T ++LSA H
Sbjct: 205 DTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVH 264
Query: 398 GGLVEKGL------------------------EIFRSMKERYGVKISKEHYACVVDMLCR 433
G +++ ++F M E G+ Y V+
Sbjct: 265 GFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGIS-----YNVVITSYAW 319
Query: 434 SGRMVEAYDLL----------RQVPMYVTNSMAGA---FRNGCNIHGRRDLAVTMGEEFF 480
+G+ E++DL RQ P S+A + R G IH + A+T+G F
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQ---AITVGANFE 376
Query: 481 EMGLRKPDGFVMLSNICAADGE 502
R + V + C D E
Sbjct: 377 S---RVENALVDMYAKCNGDKE 395
>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
Length = 591
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 277/568 (48%), Gaps = 55/568 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK------------LVGVYAGCGDVNSA 66
LL C + LR G +HA + N + S+ LV +YA CG A
Sbjct: 17 LLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYARCGRREDA 76
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS-LMREFIYRCNKFTFSIVLKACV- 124
VFD++ + N ++ AS G+ A+ F ++R C++ TF+ VL C
Sbjct: 77 ARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDRATFTTVLSECAR 133
Query: 125 -GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
G + VH + GFE +V VGNAL+ Y +CG SA RVFHGM E++V++WT
Sbjct: 134 AGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWT 193
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE 243
+MISG E+ LF +M + ++ N TY+ + + AR + +
Sbjct: 194 AMISGMARAELYKESFSLFGQM-IRTVDANNATYSCTLLACARSLAAREGQQVHGLVVKA 252
Query: 244 GF-------------------------------VPDLVTWNAMISGFAQSKRENEALKLF 272
GF PD V ++ GFAQ+ E +A +LF
Sbjct: 253 GFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELF 312
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
M+ +G + + TV+ VL A G + +G++IHALV + ++ + + L++MYSKC
Sbjct: 313 AEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKC 372
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G L+++ +F+ KN SWN++I + +HG +LFE M +G + +VT +S+L
Sbjct: 373 GELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLL 432
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
ACSH G +KGLEI SM +YGV EHYACVVDML R+G + +A + P +
Sbjct: 433 HACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDS 492
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
+ A C+ HG ++ E+ + +V+LSNI +++G W + + K
Sbjct: 493 ALLWQALMGACSFHGNSEVGKHAAEKLLLLDPSCTAAYVLLSNIYSSEGRWDDRAKVMKR 552
Query: 513 MKEKNVQKQPGFSRVEKRNEFVEKEVQN 540
M E ++K G S +E +EKEV +
Sbjct: 553 MSEMGLRKDTGKSWIE-----LEKEVHS 575
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 2/234 (0%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C L C +S A R+G+QVH L+ ++S L+ VY+ CG + A VF P
Sbjct: 228 CTLLACARSLAAREGQQVHGLVVKAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREP 287
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ L +++ A G ++A F+ M ++ T S VL A GKQ+H
Sbjct: 288 DEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIH 347
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A+ + F + V N L++MYSKCG L + +VF M ++ VSW S+I+ +
Sbjct: 348 ALVIKRCFGVNTYVCNGLVNMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGS 407
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDL 249
E LFE MK +G +P T+ +++ + + G + + M+++ G +P +
Sbjct: 408 EVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRM 461
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSAR 67
N + N + +LG S GKQ+HAL+ + + + + LV +Y+ CG++ +
Sbjct: 320 NEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESV 379
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
VFD++P+ N N ++ A A G+ E F M+ + TF +L AC +
Sbjct: 380 QVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVG 439
Query: 128 DIKKGKQV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH-GMFERDVVSWTSM 185
KKG ++ +++++Q G + ++DM + GLL A+ G F + W ++
Sbjct: 440 SAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDSALLWQAL 499
Query: 186 ISGYCN 191
+ G C+
Sbjct: 500 M-GACS 504
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG-----------SALIDMYSK 331
N +G+L + G G +++G +HA V + H + +AL+ MY++
Sbjct: 10 NYARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYAR 69
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA-NEVTLIS 390
CG +DA +F+ R+++ SWN++I G ++ LF RML RA + T +
Sbjct: 70 CGRREDAARVFDEMRVRDAVSWNSLIAASRGAG---DALALFRRMLRSDARACDRATFTT 126
Query: 391 VLSACSHGG 399
VLS C+ G
Sbjct: 127 VLSECARAG 135
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 296/570 (51%), Gaps = 55/570 (9%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVF 70
V Y+ +L C +++L+ G ++H + ++F + + L+ +Y CG V A F
Sbjct: 107 VTYV-AILNACASTESLKDGMEIHGQILQQGFEGDVF-VGTALINMYNKCGSVRGAWDSF 164
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR--------CNKFTFSIVLKA 122
++ + +V ++W M +A + Q F+L R ++YR NK T V A
Sbjct: 165 KRLEHRDV--VSWTAMIAACVQHDQ-----FALAR-WLYRRMQLDGVVPNKITLYTVFNA 216
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
+ +GK ++++ + E+DV V N+ ++M+ GLL ARR+F M +RDVV+W
Sbjct: 217 YGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTW 276
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR-----RGD-------- 229
+I+ Y EAV LF R++ +G++ N T+ ++ Y +G
Sbjct: 277 NIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKE 336
Query: 230 ---------SNAAFAFFSRMTAEG-----FV----PDLVTWNAMISGFAQSKRENEALKL 271
+ A + + R A G FV D++TW M +AQ+ EAL+L
Sbjct: 337 AGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQL 396
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F+ M + G +P + T+ VL ++Q GR+IH+ + G +++ +ALI+MY K
Sbjct: 397 FQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGK 456
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
CG + +AR++FE +++ WN+M+G Y +HG D +++LF +M +G +A+ V+ +SV
Sbjct: 457 CGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSV 516
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
LSA SH G V G + F +M + + + + E Y CVVD+L R+GR+ EA D++ ++ +
Sbjct: 517 LSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCL 576
Query: 452 TNSMAG-AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR 510
+ + C H + D A E+ E +V+LSN+ AA G+W +R
Sbjct: 577 PDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMR 636
Query: 511 KIMKEKNVQKQPGFSRVEKRN---EFVEKE 537
K+M+ + V+K+PG S +E N EF+E +
Sbjct: 637 KLMRSRGVKKEPGRSSIEILNRVHEFLEGD 666
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 156/520 (30%), Positives = 248/520 (47%), Gaps = 51/520 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL +C +K + G++VH +C +L L+ +YA CG V A+ VF+ + +
Sbjct: 11 LLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKD 70
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
VF M+ G++ A+G F M+E K T+ +L AC +K G ++H
Sbjct: 71 VFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHG 130
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
Q GFE DV VG ALI+MY+KCG + A F + RDVVSWT+MI+ +
Sbjct: 131 QILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFAL 190
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDS-------------------------NA 232
A L+ RM+L+G+ PN+ T + +Y GD N+
Sbjct: 191 ARWLYRRMQLDGVVPNKITLYTVFNAY---GDPHYLSEGKFIYSLVSSRVMESDVRVMNS 247
Query: 233 AFAFF--------SRMTAEGFVP-DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
A F +R E V D+VTWN +I+ + Q++ EA++LF + GIK N
Sbjct: 248 AMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKAN 307
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
++T +L S+ G+ IH LV G DV +AL+ +Y +C + A +F
Sbjct: 308 DITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFV 367
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
K+V +W M Y ++G +++LF+ M EG R TL++VL C+H ++K
Sbjct: 368 DMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQK 427
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFR 460
G +I + E G ++ +++M + G+M EA ++ + + + V NSM GA+
Sbjct: 428 GRQIHSHIIEN-GFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYA 486
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGL--RKPDGFVMLSNICA 498
HG D + + F +M L K D +S + A
Sbjct: 487 Q----HGYYDETLQL---FNQMQLDGEKADAVSFVSVLSA 519
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 158/333 (47%), Gaps = 39/333 (11%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
F +L+ C ++ G++VH GFE + V LI MY++CG + A++VF +
Sbjct: 8 FVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 67
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------ 217
+DV +WT MI YC D A+ +F +M+ E + P + TY
Sbjct: 68 RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 127
Query: 218 -----------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
A+I Y + G A+ F R+ D+V+W AMI+
Sbjct: 128 IHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR----DVVSWTAMIAACV 183
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q + A L++ M + G+ PN +T+ V A G + G+ I++LV + DV
Sbjct: 184 QHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVR 243
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
++ ++M+ G L DAR LFE ++V +WN +I Y ++ ++ LF R+ ++G
Sbjct: 244 VMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDG 303
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
++AN++T + +L+ + + KG I +KE
Sbjct: 304 IKANDITFVLMLNVYTSLTSLAKGKVIHELVKE 336
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 71/127 (55%)
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
KP+ +LQ ++ GR +H VC G + LI MY++CGS+ +A+
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+FEI K+V +W MIG Y + G D ++ +F +M EE + +VT +++L+AC+
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 401 VEKGLEI 407
++ G+EI
Sbjct: 122 LKDGMEI 128
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 263/536 (49%), Gaps = 70/536 (13%)
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS-LMREFIYRCNKFTFSIVLKA 122
+ AR VFD+ P + + A G + + + F+ ++ E N F + V++
Sbjct: 62 HDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRC 121
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C G+ D++ GK+VH + G DV + NA++DMY+KCG ARRVF M ERD VSW
Sbjct: 122 CAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSW 181
Query: 183 T-------------------------------SMISGYCNVSKVDEAVVLFERMKLEGLE 211
++ISG +A+ RM G+
Sbjct: 182 NIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVV 241
Query: 212 PNQFTYNA---------------------IIAS--------------YARRGDSNAAFAF 236
N +TY+ +IA+ Y + G AA +
Sbjct: 242 FNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASV 301
Query: 237 FSRMTAEGFVPDL-VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F + D+ W+ M++G+ Q+ RE EAL LF+ ML G+ + T+T V A
Sbjct: 302 FDHWSP--LTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACA 359
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
G ++ GR++H V ++ +D SA++DMY+KCG+L+DAR++F+ KN+A W +
Sbjct: 360 NVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTS 419
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
M+ Y HG +IELFERM E M NE+TL+ VLSACSH GLV +G F+ M+E Y
Sbjct: 420 MLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEY 479
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTM 475
G+ S EHY C+VD+ RSG + +A + + + + + + C +H + A
Sbjct: 480 GIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLA 539
Query: 476 GEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
E+ ++ +VMLSNI A + +WH+ LR M+E+ V+KQPG S + +N
Sbjct: 540 SEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKN 595
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 175/549 (31%), Positives = 287/549 (52%), Gaps = 48/549 (8%)
Query: 23 CMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C + L G+QVH ++ N + + + L+ +YA G V A+ VFD++ + V +
Sbjct: 659 CSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELR 718
Query: 82 NWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHA 137
N M+ SAF GN + +A+G ++ M+ + FT S +L C VG D G+ VHA
Sbjct: 719 NAMI--SAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDF--GRTVHA 774
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ +++V++ +AL+ MY KCG A VF+ M ERDVV+W SMI+G+C + +
Sbjct: 775 EVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKD 834
Query: 198 AVVLFERMKLE-----------------------------------GLEPNQFTYNAIIA 222
A+ LF M+ E GLE + F +++
Sbjct: 835 ALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVD 894
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y++ G + +A FS M + +LV WN+MIS ++ + ++ L +L G
Sbjct: 895 MYSKFGFAESAEMVFSSMPNK----NLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYL 950
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
++V++T VL A ++ G+ +HA R+ + D+ +ALIDMY KCG LK A+ +F
Sbjct: 951 DSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIF 1010
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E +N+ +WN+MI YG HG + ++ LF+ M +EVT ++++++CSH G+VE
Sbjct: 1011 ENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVE 1070
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+GL +F+ M+ YGV+ EHYA VVD+L R+GR+ +AY +R +P+ S+
Sbjct: 1071 EGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFA 1130
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C H +L + + +M + +V L N+ W A NLR MK + ++K P
Sbjct: 1131 CRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSP 1190
Query: 523 GFSRVEKRN 531
G S +E +N
Sbjct: 1191 GCSWIEVKN 1199
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 141/544 (25%), Positives = 253/544 (46%), Gaps = 58/544 (10%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFD 71
L +LG C + G+Q+H + N+F L++ L+G+Y+ C A +F
Sbjct: 550 LSIVLGICNRLSWYMAGRQIHGYIIR---NMFEGDPYLETALIGMYSSCSRPMEAWSLFG 606
Query: 72 KIPN-PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
K+ N N+ N M+ G +++++ +SL + + +F+ AC +
Sbjct: 607 KLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLD 666
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
G+QVH +M F++D V +L+ MY+K G + A++VF + +++V +MIS +
Sbjct: 667 FGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFI 726
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
+ +A+ L+ +MK + FT
Sbjct: 727 GNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVA 786
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
+A++ Y + G + A + F M D+V W +MI+GF Q++R +AL LF+ M
Sbjct: 787 IQSALLTMYYKCGSTEDADSVFYTMKER----DVVAWGSMIAGFCQNRRFKDALDLFRAM 842
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
G+K ++ +T V+ AG ++++G IH + GL DVF +L+DMYSK G
Sbjct: 843 EKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFA 902
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ A +F KN+ +WN+MI CY +G+ + SI L ++L+ G + V++ +VL A
Sbjct: 903 ESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAV 962
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVT 452
S + KG + + + R + + ++DM + G + A + +P +
Sbjct: 963 SSVAALLKG-KTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTW 1021
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLR 510
NSM + + HG + AV + +E + PD F+ L C+ G E NL
Sbjct: 1022 NSMIAGYGS----HGNCEEAVRLFKE-MKRSETAPDEVTFLALITSCSHSGMVEEGLNLF 1076
Query: 511 KIMK 514
++M+
Sbjct: 1077 QLMR 1080
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 200/441 (45%), Gaps = 57/441 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPN-- 75
LL C L G+ +HA + T L + + L+ +Y CG + SA VFDK+
Sbjct: 447 LLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESR 506
Query: 76 ---PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
P++ + N ++ G+F+E + F M+E R + ++ SIVL C L G
Sbjct: 507 DSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAG 566
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER-DVVSWTSMISGYCN 191
+Q+H + FE D + ALI MYS C A +F + R ++V+W MI G+
Sbjct: 567 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 626
Query: 192 VSKVDEAVVLFERMKLE-----------------------------------GLEPNQFT 216
++++ L+ K E + + +
Sbjct: 627 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 686
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
+++ YA+ G A F ++ + ++ NAMIS F + R +AL L+ M
Sbjct: 687 CTSLLTMYAKSGSVEDAKKVFDQVLDK----EVELRNAMISAFIGNGRAYDALGLYNKMK 742
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
++ T++ +L + GS GR +HA V + + +V SAL+ MY KCGS +
Sbjct: 743 AGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTE 802
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA-- 394
DA ++F + ++V +W +MI + ++ +++LF M +EG++A+ + SV+SA
Sbjct: 803 DADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGL 862
Query: 395 ---------CSHGGLVEKGLE 406
HG +++GLE
Sbjct: 863 GLENVELGHLIHGFAIKRGLE 883
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 181/429 (42%), Gaps = 83/429 (19%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G + +A+ S KFTF +LK C L ++ G+ +HA MG ++D +
Sbjct: 420 GKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIA 479
Query: 152 NALIDMYSKCGLLCSARRVFHGMFER-----DVVSWTSMISGYCNVSKVDEAVVLFERMK 206
+LI+MY KCGLL SA +VF M E D+ W +I GY +E + F RM+
Sbjct: 480 TSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQ 539
Query: 207 LEGLEPNQFTYN-----------------------------------AIIASYARRGDSN 231
G+ P+ ++ + A+I Y+
Sbjct: 540 ELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPM 599
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A++ F ++ ++V WN MI GF ++ ++L+L+ K + + TG
Sbjct: 600 EAWSLFGKLENRS---NIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAF 656
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A + GR++H V +M D + ++L+ MY+K GS++DA+ +F+ K V
Sbjct: 657 TACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVE 716
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HGGL 400
NAMI + +G ++ L+ +M + T+ S+LS CS H +
Sbjct: 717 LRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEV 776
Query: 401 VEKGLE------------------------IFRSMKERYGVKISKEHYACVVDMLCRSGR 436
+++ ++ +F +MKER V + ++ C++ R
Sbjct: 777 IKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVA-----WGSMIAGFCQNRR 831
Query: 437 MVEAYDLLR 445
+A DL R
Sbjct: 832 FKDALDLFR 840
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 158/346 (45%), Gaps = 26/346 (7%)
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
KA + L+++ + +++ A+ Q + ++++SK H
Sbjct: 399 KAVLELMNLPQVEEIKALVQQGKYSQ-------ALELHSKTP---------HSALTTAKF 442
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
++ S++ ++S + + + GL+ + + ++I Y + G +A F +M
Sbjct: 443 TFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKM 502
Query: 241 T-AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
+ + PD+ WN +I G+ + E L F M GI+P+ +++ VL
Sbjct: 503 SESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSW 562
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIG 358
GR+IH + R D + +ALI MYS C +A +LF ++ N+ +WN MIG
Sbjct: 563 YMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIG 622
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
+ ++GM + S+EL+ E + + +ACSHG +++ G ++ + + +
Sbjct: 623 GFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIK---MN 679
Query: 419 ISKEHYAC--VVDMLCRSGRMVEAYDLLRQV---PMYVTNSMAGAF 459
+ Y C ++ M +SG + +A + QV + + N+M AF
Sbjct: 680 FQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAF 725
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/550 (30%), Positives = 280/550 (50%), Gaps = 36/550 (6%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNS 65
P +N+S+ + LL C L Q VHA L L S L ++ + ++
Sbjct: 23 PKSNVSLYSISALLKLCKTHIDLHQ---VHAHLIQKGLEQDSFLVTQFISASNSVAHISY 79
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
+ VFD++ +P+ F+ N +V F + I + M+ +++TF +LK C
Sbjct: 80 STSVFDRVLSPSTFLWNSLVSGYCAKLQFVDIISLYVRMKREDGAPDRYTFPSLLKVCAS 139
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
+ +G +H + G + D+ V +L+++Y K GL+ AR+VF GM ER+VVSWT+M
Sbjct: 140 EGKMMEGMALHGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTAM 199
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
I GY ++ + EA LF+ M E N ++NAII Y + GD +A F M +
Sbjct: 200 IVGYSSIGNLVEAKRLFDLMP----ERNVASWNAIIGGYMKMGDVKSAEKAFDEMPEKNV 255
Query: 246 VP---------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
V D++ W+A+ISG+ Q+ + NEA+K F M
Sbjct: 256 VSFTTMIDGYAKAGDMLSARNLFQKAPERDIIAWSALISGYTQNGQPNEAVKTFLEMSSR 315
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI-DVFTGSALIDMYSKCGSLKD 337
+KP+ +T ++ A G++ + + + + R + + +ALIDM +KCG+++
Sbjct: 316 NVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMER 375
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A LFE +++ S+ +++ HG D ++ LFERML E + ++V +L+ACS
Sbjct: 376 AMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDLTPDDVAFTVILTACSR 435
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
GLV++G F M+ +Y + S +HYAC+VD+L RSGR+ EAY+L++ VP+ G
Sbjct: 436 AGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWG 495
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
A C ++ +LA + E+ +V+LSNI AA W + +R M E+
Sbjct: 496 ALLGACKLYCDSELAEVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERG 555
Query: 518 VQKQPGFSRV 527
++K PG S +
Sbjct: 556 LRKIPGCSWI 565
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 265/507 (52%), Gaps = 37/507 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLM------ 104
+V Y G GD++SA + F KIP PNV ++W+ M S F G EA F+ M
Sbjct: 208 MVDGYVGVGDLDSAWMFFKKIPTPNV--VSWVTMLSGFAHYGRMTEARNLFNEMPTKNLV 265
Query: 105 ----------RE-FIYRCNKFTFSIVLKACV-------GLLDIKKGKQVHAVATQMGFEN 146
RE I K + K V G + + K Q + M ++N
Sbjct: 266 SWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKN 325
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
++ A+I+ Y + G + A +F + RD V W SMI+GY + + DEA+ LF+ M
Sbjct: 326 -IAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMV 384
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
+ + ++N +IA+YA+ G + A F+ M ++V+WN++I+G+ Q+
Sbjct: 385 CKDM----VSWNTMIAAYAQAGQMDKALEMFNEMQER----NVVSWNSLITGYVQNGLYF 436
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
EAL F M G KP+ T+ L+A ++ +G ++H L + G D+F +A++
Sbjct: 437 EALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAIL 496
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
MY+K G + +A +F + K+V SWN++I Y +G ++ELFE M G+ +EV
Sbjct: 497 TMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEV 556
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T +LSAC+HGG V++GL +F+SM E Y +K EHYACV+++L R GR+ EA ++++
Sbjct: 557 TFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQG 616
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
+ + + GA C IH +LA E + + +V+LSN+ A G W
Sbjct: 617 MKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMV 676
Query: 507 ENLRKIMKEKNVQKQPGFSRVEKRNEF 533
E +R +MKE +KQPG S +E N+
Sbjct: 677 ERVRVLMKENKAEKQPGCSWIEIDNQL 703
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 193/408 (47%), Gaps = 43/408 (10%)
Query: 30 RQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
R + V L + NI + S ++ YA G + +AR +FD +P N+ N M+
Sbjct: 30 RIEEAVAVFLQMTERNIVTYNS-MISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYL 88
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
++A F M ++ + +++++++ + +++K +++ + + D
Sbjct: 89 HNELVEDAARLFDRM----FKRDIYSWTLMITCYTRIGELEKARELFNLLPD---KQDTV 141
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
NALI Y+K L A+++F M ++VVSW S++SGY K+ + FE M
Sbjct: 142 CRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMG--- 198
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
E N ++N ++ Y GD ++A+ FF ++ P++V+W M+SGFA R EA
Sbjct: 199 -ERNVVSWNLMVDGYVGVGDLDSAWMFFKKIP----TPNVVSWVTMLSGFAHYGRMTEAR 253
Query: 270 KLFKGMLVSGIKPNNVTV----------------------TGVLQAGGLTGSIQIGREIH 307
LF M + N + V + G +++G+ +
Sbjct: 254 NLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQ 313
Query: 308 AL-VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
A + + + ++ +A+I+ Y + G + +A +F +++ WN+MI Y G
Sbjct: 314 AREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRT 373
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
D ++ LF+ M+ + M V+ ++++A + G ++K LE+F M+ER
Sbjct: 374 DEALRLFQEMVCKDM----VSWNTMIAAYAQAGQMDKALEMFNEMQER 417
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 193/408 (47%), Gaps = 50/408 (12%)
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
AV QM E ++ N++I Y+K G + +AR +F M +R++VSW SMI+GY + V+
Sbjct: 36 AVFLQMT-ERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVE 94
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
+A LF+RM + + +++ +I Y R G+ A F+ + + D V NA+I
Sbjct: 95 DAARLFDRM----FKRDIYSWTLMITCYTRIGELEKARELFNLLPDK---QDTVCRNALI 147
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI-HALVCRMGL 315
+G+A+ + EA KLF MLV + N ++G + G + +Q + V L
Sbjct: 148 AGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNL 207
Query: 316 HIDVFTGSALIDM----------------------YSKCGSLKDARTLFEITRIKNVASW 353
+D + G +D ++ G + +AR LF KN+ SW
Sbjct: 208 MVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSW 267
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
NAMIG Y + +D + +LF M E+ + V+ ++++ G + + EI M
Sbjct: 268 NAMIGAYVRENQIDDAYKLFMEMPEK----DSVSWTAMINGYVRVGKLLQAREILNLMPY 323
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT---NSMAGAFRNGCNIHGRRD 470
+ I+ + +++ +SGRM EA ++ Q+ + + NSM + + C GR D
Sbjct: 324 K---NIAAQ--TAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAH-C---GRTD 374
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
A+ + F EM + + + A G+ +A + M+E+NV
Sbjct: 375 EALRL---FQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNV 419
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
VFT + I + G +++A +F +N+ ++N+MI Y K+G + ++ ELF+ M +
Sbjct: 15 VFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC--RSGR 436
N V+ S+++ H LVE +F M +R + Y+ + + C R G
Sbjct: 75 R----NLVSWNSMIAGYLHNELVEDAARLFDRMFKR-------DIYSWTLMITCYTRIGE 123
Query: 437 MVEAYDLLRQVP 448
+ +A +L +P
Sbjct: 124 LEKARELFNLLP 135
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 183/581 (31%), Positives = 286/581 (49%), Gaps = 80/581 (13%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYA--GCGDVNSARLVFDKIPN 75
+ KC SK L K+VHA + L + FS SKL A ++ AR +FD+IP
Sbjct: 32 IDKCSSSKQL---KEVHARMLRTGLFFDPFS-ASKLFTASALSSFSTLDYARNLFDQIPQ 87
Query: 76 PNVFMLNWMVMASAFTGN-FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
PN++ N ++ A A + + FQ + + L+ + NKFTF V+KA L + G
Sbjct: 88 PNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTA 147
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH +A ++ F D+ + N+L+ Y CG L A R+F G+ +DVVSW SMIS + +
Sbjct: 148 VHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNC 207
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
++A+ LF +M+ E + PN T NA
Sbjct: 208 PEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNA 267
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA------------------- 260
++ Y + G + A F M D+ +W M+ G+A
Sbjct: 268 MLDMYTKCGSVDDAQKLFDEMPER----DVFSWTIMLDGYAKMGDYDAARLVFNAMPVKE 323
Query: 261 ------------QSKRENEALKLFKGMLVSGI-KPNNVTVTGVLQAGGLTGSIQIGREIH 307
Q+ + EAL +F + +S I KP+ VT+ L A G+I +G IH
Sbjct: 324 IAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIH 383
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+ R G+ ++ S+L+DMY+KCGSL+ A +F ++V W+AMI G HG
Sbjct: 384 VYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGK 443
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
++I+LF M E ++ N VT +VL ACSH GLV++G F M+ YGV +HYAC+
Sbjct: 444 AAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACM 503
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
VD+L R+G + EA +L+ ++ + S+ GA C++H +L ++ ++ R
Sbjct: 504 VDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNH 563
Query: 488 DGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
V+LSNI A G W + LRK+M++ ++K+PG S +E
Sbjct: 564 GAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIE 604
>gi|225456926|ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g64310-like [Vitis vinifera]
Length = 560
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 171/537 (31%), Positives = 276/537 (51%), Gaps = 40/537 (7%)
Query: 27 KALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+ L + K++HA + N L+ ++++ YA D+ SAR +FD +V++ N ++
Sbjct: 23 QTLPRTKKLHAFIIRNHLSDDPFYATRILRFYAINSDLCSARNLFDGTSYRSVYLWNSVI 82
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
A A F +A+ F+ M + + FTF+ VL+AC D + VH G
Sbjct: 83 RAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFDPDGLRVVHGGVVVSGLG 142
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
D G+AL+ YSK ++ A RVF+GM E D+V W +M +GY D+ + LF M
Sbjct: 143 FDSVCGSALVTAYSKLCMVDEASRVFYGMAEPDLVLWNAMAAGYGYCGFWDKGLQLFSAM 202
Query: 206 KLEGLEPNQFTY-----------------------------------NAIIASYARRGDS 230
+ G +P+ +T +A+++ Y+R
Sbjct: 203 RSMGEQPDSYTMVGLISGLADPSLLGIGKGIHGFCLKSSFDCNDHVGSALVSMYSRCHCL 262
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
N+A+ F+ ++ PDLVTW+A+I+G ++S +AL F+ M + G + + + + V
Sbjct: 263 NSAYGVFTILSQ----PDLVTWSALITGLSKSGDYEKALLFFRKMNMEGKRVDPILIASV 318
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A G + + G EIH V R GL +V SALIDMYSKCG + +F+ +N
Sbjct: 319 LAASGQSAILGPGSEIHGYVLRHGLESEVMISSALIDMYSKCGFVNLGVRVFDSMPNRNT 378
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
S+N+MI G HG+ + ++FE +LE+G + +E T ++L C H GLV+ G EIF
Sbjct: 379 VSYNSMILGLGIHGLAPQAFKMFEEVLEKGFKPDESTFSALLCTCCHAGLVKNGREIFSR 438
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M E + ++ +HY +V +L +G + EAYDL+ + V + + GA + CN HG +
Sbjct: 439 MTEEFHIQARTDHYVHMVKLLGMAGELQEAYDLILSLQQPVDSGIWGALLSCCNFHGNPE 498
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
LA + ++ FE K VMLSNI A D W + + LR ++E ++K PG S +
Sbjct: 499 LAEIVAQQLFENKPEKSAYRVMLSNIYAGDDRWDDVKKLRDDIQEAGIKKMPGLSWI 555
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/486 (33%), Positives = 255/486 (52%), Gaps = 43/486 (8%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ ++ Y D+++A+ + N M+ A G + EA F M +
Sbjct: 227 TTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQ 286
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHA--VATQMGFENDVS--VGNALIDMYSKCGLLCS 166
++FTF+ V+ C + GK++HA + T DV+ V NALI Y KCG +
Sbjct: 287 LDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDI 346
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
A+ +F+ M ERD+VSW ++SGY NV +DEA
Sbjct: 347 AQEIFNKMPERDLVSWNIILSGYVNVRCMDEAK--------------------------- 379
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
+FF+ M + ++++W MISG AQ EALK F M + G +P +
Sbjct: 380 --------SFFNEMPEK----NILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYA 427
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
G + + + GS++ GR++HA V R G + G+ALI MY++CG + A LF
Sbjct: 428 FAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMP 487
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+ SWNAMI G+HG +IELFE ML+EG+ + ++ ++V+SACSH GLV++G +
Sbjct: 488 CVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRK 547
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F SM YGV +EHYA ++D+LCR+G+ EA +++ +P + A GC IH
Sbjct: 548 YFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIH 607
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
G DL + E FE+ + +V+LSN+ A G+W++ +RK+M+++ V+K+PG S
Sbjct: 608 GNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSW 667
Query: 527 VEKRNE 532
+E N+
Sbjct: 668 IEVENK 673
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 204/501 (40%), Gaps = 99/501 (19%)
Query: 50 KSKLVGVYAGCGDVNSARLVFDKIP---NPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE 106
++ L+ Y+ GD+ +R +F P +VF N M+ A + + AI F M+
Sbjct: 82 RTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVF-YNAMITAYSHNHDGHAAIELFCDMQR 140
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKG-KQVHAVATQMGFENDVSVGNALIDMYSKCG--- 162
+R + +TF+ VL A + + +K +Q+H + G SV NALI Y KC
Sbjct: 141 DNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASP 200
Query: 163 ------LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT 216
L+ AR++F M RD +SWT+
Sbjct: 201 SAQSSSLMAEARKLFDEMPNRDELSWTT-------------------------------- 228
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL-VTWNAMISGFAQSKRENEALKLFKGM 275
II Y + D +AA F + G L V WNAMISG+A EA ++F+ M
Sbjct: 229 ---IITGYVKNNDLDAAKEFLN-----GTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKM 280
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL----VCRMGLHIDVFTGSALIDMYSK 331
++S I+ + T T V+ G ++G+E+HA V + + +ALI Y K
Sbjct: 281 IMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWK 340
Query: 332 CGS-------------------------------LKDARTLFEITRIKNVASWNAMIGCY 360
CG + +A++ F KN+ SW MI
Sbjct: 341 CGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGL 400
Query: 361 GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKIS 420
+ G + +++ F RM +G + + +CS G ++ G ++ + RYG + S
Sbjct: 401 AQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQL-HAQVVRYGYESS 459
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT---NSMAGAFRNGCNIHGRRDLAVTMGE 477
++ M R G + A+ L +P N+M A HG+ A+ + E
Sbjct: 460 LSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQ----HGQGTQAIELFE 515
Query: 478 EFFEMGLRKPDGFVMLSNICA 498
E + G+ PD L+ I A
Sbjct: 516 EMLKEGIL-PDRISFLTVISA 535
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 166/369 (44%), Gaps = 41/369 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN-----IFSLKSKLVGVYAGCGDVNSARLVFDKI 73
++ C + R GK++HA N + + L+ Y CG V+ A+ +F+K+
Sbjct: 295 VISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKM 354
Query: 74 PN-----------------------------PNVFMLNWMVMASAFT--GNFQEAIGYFS 102
P P +L+W++M S G +EA+ +F+
Sbjct: 355 PERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFN 414
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M+ + + F+ + +C L +K G+Q+HA + G+E+ +S GNALI MY++CG
Sbjct: 415 RMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCG 474
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
++ +A +F M D +SW +MI+ + +A+ LFE M EG+ P++ ++ +I+
Sbjct: 475 VVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVIS 534
Query: 223 SYARRGDSNAAFAFFSRM-TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ + G +F M G PD + +I ++ + +EA ++ + M +
Sbjct: 535 ACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESM---PFE 591
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P +L + G+I +G E + + D T L +MY+ G D +
Sbjct: 592 PGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDG-TYVLLSNMYAVAGQWNDMAKV 650
Query: 342 FEITRIKNV 350
++ R + V
Sbjct: 651 RKLMRDRGV 659
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 130/317 (41%), Gaps = 78/317 (24%)
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
+ VHA GF+ + N LID+YSK
Sbjct: 32 ARPVHAHMIASGFQPRGHILNRLIDIYSKS------------------------------ 61
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
SK++ A LF+ + +P+ +IA+Y+ GD + FS T G + D V
Sbjct: 62 -SKLNYARYLFDEIP----QPDIVARTTLIAAYSAAGDLKLSRKIFSD-TPLG-MRDSVF 114
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALV 310
+NAMI+ ++ + + A++LF M +P+N T T VL A L + +++H V
Sbjct: 115 YNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAV 174
Query: 311 CRMGLHIDVFTGSALIDMYSKCGS---------LKDARTLFE-------------IT-RI 347
+ G +ALI Y KC + + +AR LF+ IT +
Sbjct: 175 VKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYV 234
Query: 348 KNV-----------------ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
KN +WNAMI Y G+ + E+F +M+ ++ +E T S
Sbjct: 235 KNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTS 294
Query: 391 VLSACSHGGLVEKGLEI 407
V+S C++ G G E+
Sbjct: 295 VISVCANAGCFRLGKEM 311
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 279/549 (50%), Gaps = 40/549 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C AL +G Q+H+ ++ L+ L+ +Y+ C DV +A F N
Sbjct: 368 LLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETEN 427
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ + N M++A N ++ F M+ N+FT+ +L+ C L + G+Q+H
Sbjct: 428 IVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHT 487
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ GF+ +V V + LIDMY+K G L A R+ + E DVVSWT+MI+GY E
Sbjct: 488 HVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSE 547
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
A+ LFE M+ G++ + + NA+I+
Sbjct: 548 ALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALIS 607
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YAR G A+ F ++ + + ++WN+++SG AQS EAL++F ML + +
Sbjct: 608 LYARCGRIQEAYLAFEKIGDK----NNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEV 663
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N T + A +I+ G++IH++V + G + ++LI +Y+K GS+ DA F
Sbjct: 664 NMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREF 723
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+NV SWNAMI Y +HG ++ LFE M G+ N VT + VLSACSH GLV+
Sbjct: 724 NDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVK 783
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+GL+ F SM + + + EHY CVVD+L R+G++ A + ++++P+ + +
Sbjct: 784 EGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSA 843
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IH ++ E+ +V++SNI A +W + RK+MK++ V+K+P
Sbjct: 844 CVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEP 903
Query: 523 GFSRVEKRN 531
G S +E +N
Sbjct: 904 GRSWIEVKN 912
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/473 (30%), Positives = 233/473 (49%), Gaps = 45/473 (9%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDK 72
NYL LL C+ S +L + ++H + + + L LV Y GD + A VFD+
Sbjct: 60 NYL-WLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDE 118
Query: 73 IPNPNVFMLNWMVMA-SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG-LLDIK 130
N +VF N M+ A NFQ + ++ E I N +TF+ VLKACVG +
Sbjct: 119 NSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGI-TPNGYTFAGVLKACVGGDIAFN 177
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
KQVH+ GF++ V N LID+YSK G + SA++VF+ + +D+V+W +MISG
Sbjct: 178 YVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLS 237
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQF---------------------------------TY 217
+EA++LF M + P + TY
Sbjct: 238 QNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETY 297
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
N ++A Y+R +A FS M + D V++N++ISG Q + AL+LF M
Sbjct: 298 VCNGLVALYSRSRKLISAERIFSTMNSR----DGVSYNSLISGLVQQGFSDRALELFTKM 353
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+KP+ +TV +L A G++ G ++H+ + G+ D+ +L+D+YSKC +
Sbjct: 354 QRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADV 413
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ A F T +N+ WN M+ YG+ + S E+F +M EGM N+ T S+L C
Sbjct: 414 ETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTC 473
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ G + G +I + + G +++ + ++DM + G++ A +LR++P
Sbjct: 474 TSLGALYLGEQIHTHVI-KTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP 525
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 205/427 (48%), Gaps = 46/427 (10%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYR 110
L+ +Y+ G + SA+ VF+ I ++ + W+ M S + N +EAI F M
Sbjct: 201 LIDLYSKNGYIESAKKVFNCICMKDI--VTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ S VL A + + G+Q+H + + GF ++ V N L+ +YS+ L SA R+
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------- 223
F M RD VS+ S+ISG D A+ LF +M+ + L+P+ T +++++
Sbjct: 319 FSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGAL 378
Query: 224 ----------------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
Y++ D A FF +T E ++V WN M
Sbjct: 379 HKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF--LTTE--TENIVLWNVM 434
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ + Q +++ ++F+ M + G+ PN T +L+ G++ +G +IH V + G
Sbjct: 435 LVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGF 494
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
++V+ S LIDMY+K G L A + +V SW AMI Y +H M +++LFE
Sbjct: 495 QLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEE 554
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRS 434
M G++ + + S +SAC+ + +G +I +S +G +S + ++ + R
Sbjct: 555 MEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN--ALISLYARC 612
Query: 435 GRMVEAY 441
GR+ EAY
Sbjct: 613 GRIQEAY 619
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 234/505 (46%), Gaps = 49/505 (9%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDV 63
IFP + L +L K + G+Q+H L+ + + + + LV +Y+ +
Sbjct: 257 IFPTPYV----LSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKL 312
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
SA +F + + + N ++ G A+ F+ M+ + + T + +L AC
Sbjct: 313 ISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSAC 372
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+ + KG Q+H+ A + G D+ + +L+D+YSKC + +A + F ++V W
Sbjct: 373 ASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWN 432
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-------------------- 223
M+ Y + + ++ +F +M++EG+ PNQFTY +I+ +
Sbjct: 433 VMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT 492
Query: 224 ---------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
YA+ G A R+ + D+V+W AMI+G+ Q +EA
Sbjct: 493 GFQLNVYVCSVLIDMYAKYGQLALALRILRRLPED----DVVSWTAMIAGYVQHDMFSEA 548
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L+LF+ M GI+ +N+ + A +++ G++IHA G D+ +ALI +
Sbjct: 549 LQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISL 608
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y++CG +++A FE KN SWN+++ + G + ++++F RML N T
Sbjct: 609 YARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTY 668
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY----DLL 444
S +SA + +++G +I SM + G +E ++ + +SG + +A+ D+
Sbjct: 669 GSAISAAASLANIKQGQQI-HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS 727
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRR 469
+ + + G ++GC + R
Sbjct: 728 ERNVISWNAMITGYSQHGCGMEALR 752
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 160/342 (46%), Gaps = 32/342 (9%)
Query: 98 IGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDM 157
I + M E R N + +L+ C+ + + ++H ++ GF+ + + ++L+D
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 158 YSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
Y + G A +VF R V SW MI + + LF RM EG+ PN +T+
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 218 NAIIAS---------YARRGDSNAAFAFFSR-----------MTAEGFV----------- 246
++ + Y ++ S + F + G++
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222
Query: 247 -PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
D+VTW AMISG +Q+ E EA+ LF M S I P ++ VL A ++G +
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+H LV + G H + + + L+ +YS+ L A +F ++ S+N++I + G
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
D ++ELF +M + ++ + +T+ S+LSAC+ G + KG+++
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQL 384
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 4/180 (2%)
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
+SKR ++L M G++ N +L+ +GS+ +H + + G +
Sbjct: 39 KSKR----IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPL 94
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
+L+D Y + G A +F+ ++V SWN MI + LF RML EG
Sbjct: 95 LIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEG 154
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ N T VL AC G + ++ S YG S ++D+ ++G + A
Sbjct: 155 ITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/550 (30%), Positives = 280/550 (50%), Gaps = 38/550 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C K +A+ GK HA + + ++ + L+ Y+ CG ++S+ +F K+P N
Sbjct: 464 ILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRN 523
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
N ++ G+ ++A+ M++ + T ++ C ++ +G +H
Sbjct: 524 AISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHG 583
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
A + GF DVS+ NALI MY CG + + + +F M R +VSW ++I+GY +E
Sbjct: 584 YAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNE 643
Query: 198 AVVLFERMKLEGLEPNQFTY--------------------------------NAIIASYA 225
+ F +M EG +PN T ++I+ YA
Sbjct: 644 VMASFCQMIREGQKPNYVTLLNLLPSCRTLLQGKSIHAFAVRTGVIVETPIITSLISMYA 703
Query: 226 RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
R + N +F F M G D+ WNA++S + Q+K E++ F +L + ++P+ +
Sbjct: 704 RFENIN-SFIFLFEM---GGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYI 759
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T ++ A S+ + + A V + G + +ALID++++CG++ A+ +FE
Sbjct: 760 TFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGL 819
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
K+ SW+ MI YG HG ++++ L +M GM+ + +T SVLSACSHGG +++G
Sbjct: 820 SSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGW 879
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
IF SM E GV EHYAC+VD+L R+G++ EAYD + ++P + S+ + C I
Sbjct: 880 MIFNSMVEE-GVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACII 938
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
HG L + FE+ + +VML NI AA G W +A +R M+E+ ++K PGFS
Sbjct: 939 HGNVKLGEKISSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFS 998
Query: 526 RVEKRNEFVE 535
VE VE
Sbjct: 999 LVEGNRYPVE 1008
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 232/499 (46%), Gaps = 62/499 (12%)
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
F+ I P+VF+ N M+ G F++ + + R + FTF V+KAC L +
Sbjct: 112 FEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAV 171
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
+ VH + + FE ++ + AL+D Y+K G + AR V + + D+V+W ++ISGY
Sbjct: 172 WIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGY 231
Query: 190 C----------------------NVSKVDEAVVLFERMKL-------------EGLEPNQ 214
NVS + L RMK G ++
Sbjct: 232 SLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDE 291
Query: 215 FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
F A+I+ YA G+ A F + ++V WN+MIS +AQ+++ +EA K+F+
Sbjct: 292 FLTPALISMYAGGGNLFIARDLFDSAAEK----NVVIWNSMISAYAQNQKSSEAFKMFQQ 347
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
ML + ++PN VT ++ + + G+ +HA V + L + +AL+ MY+K G
Sbjct: 348 MLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGD 407
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
L A +F +N+ SWN+MI YG +G+ ++S++ F M EG + ++++++LSA
Sbjct: 408 LNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSA 467
Query: 395 CS--HGGLVEKGLEIFRSMKE-RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
CS L+ K F KE + IS A D G++ ++ L +++P+
Sbjct: 468 CSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSD----CGKLSSSFKLFQKMPL-- 521
Query: 452 TNSMA-GAFRNGCNIHGRRDLAVT----MGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
N+++ +GC +G AV M +E E+ L + + IC A
Sbjct: 522 RNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVT---LISIIPICRV------A 572
Query: 507 ENLRKIMKEKNVQKQPGFS 525
ENL + M + GF+
Sbjct: 573 ENLIQGMTLHGYAIKTGFA 591
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 191/418 (45%), Gaps = 47/418 (11%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+++ LV YA G + ARLV DKI P++ N ++ + G +E + E
Sbjct: 192 IQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMG 251
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ N TF+ ++ C + + GK +H + GF +D + ALI MY+ G L AR
Sbjct: 252 LKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIAR 311
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
+F E++VV W SMIS Y K EA +F++M ++PN T+
Sbjct: 312 DLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSA 371
Query: 218 ------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
A+++ YA+ GD N+A F +M +L++WN
Sbjct: 372 NFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRR----NLLSWN 427
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
+MISG+ + ++ F M G P+ +++ +L A +I +G+ HA R
Sbjct: 428 SMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRK 487
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
++ +AL+ YS CG L + LF+ ++N SWN +I +G ++ L
Sbjct: 488 EFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALL 547
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
+M +E M + VTLIS++ C + +G+ + +G I K +AC V ++
Sbjct: 548 HKMQQEKMELDLVTLISIIPICRVAENLIQGMTL-------HGYAI-KTGFACDVSLV 597
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 233/515 (45%), Gaps = 52/515 (10%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C S GK +HA + L+ S+ + L+ +YA GD+NSA +F ++P N+
Sbjct: 367 CENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSW 426
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
N M+ G ++ ++ F M+ + + + +L AC L I GK HA + +
Sbjct: 427 NSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFR 486
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
F++++++ NAL+ YS CG L S+ ++F M R+ +SW ++ISG + +AV L
Sbjct: 487 KEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVAL 546
Query: 202 FERMKLEGLEPNQFTY-----------------------------------NAIIASYAR 226
+M+ E +E + T NA+I+ Y
Sbjct: 547 LHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFN 606
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
GD NA F M +V+WNA+I+G+ +NE + F M+ G KPN VT
Sbjct: 607 CGDINAGKFLFEVMPWRS----IVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVT 662
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ +L + ++ G+ IHA R G+ ++ ++LI MY++ ++ LFE+
Sbjct: 663 LLNLLPS---CRTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGG 719
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+++A WNA++ Y + S+ F +L + + +T +S++SAC L
Sbjct: 720 KEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQ----LSSLN 775
Query: 407 IFRSMKERYGVKISKEHYA---CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
+ S+ K +H ++D+ R G + A + + S + NG
Sbjct: 776 LSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMI-NGY 834
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+HG + A+ + + G+ KPDG S + A
Sbjct: 835 GLHGDSEAALALLSQMRLSGM-KPDGITYASVLSA 868
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 175/549 (31%), Positives = 287/549 (52%), Gaps = 48/549 (8%)
Query: 23 CMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C + L G+QVH ++ N + + + L+ +YA G V A+ VFD++ + V +
Sbjct: 254 CSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELR 313
Query: 82 NWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHA 137
N M+ SAF GN + +A+G ++ M+ + FT S +L C VG D G+ VHA
Sbjct: 314 NAMI--SAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDF--GRTVHA 369
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ +++V++ +AL+ MY KCG A VF+ M ERDVV+W SMI+G+C + +
Sbjct: 370 EVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKD 429
Query: 198 AVVLFERMKLE-----------------------------------GLEPNQFTYNAIIA 222
A+ LF M+ E GLE + F +++
Sbjct: 430 ALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVD 489
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y++ G + +A FS M + +LV WN+MIS ++ + ++ L +L G
Sbjct: 490 MYSKFGFAESAEMVFSSMPNK----NLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYL 545
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
++V++T VL A ++ G+ +HA R+ + D+ +ALIDMY KCG LK A+ +F
Sbjct: 546 DSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIF 605
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E +N+ +WN+MI YG HG + ++ LF+ M +EVT ++++++CSH G+VE
Sbjct: 606 ENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVE 665
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+GL +F+ M+ YGV+ EHYA VVD+L R+GR+ +AY +R +P+ S+
Sbjct: 666 EGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFA 725
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C H +L + + +M + +V L N+ W A NLR MK + ++K P
Sbjct: 726 CRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSP 785
Query: 523 GFSRVEKRN 531
G S +E +N
Sbjct: 786 GCSWIEVKN 794
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 183/421 (43%), Gaps = 64/421 (15%)
Query: 81 LNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVAT 140
+N + A G + +A+ S KFTF +LK C L ++ G+ +HA
Sbjct: 23 INSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIV 82
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER-----DVVSWTSMISGYCNVSKV 195
MG ++D + +LI+MY KCGLL SA +VF M E D+ W +I GY
Sbjct: 83 TMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHF 142
Query: 196 DEAVVLFERMK----------LEG------LEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
+E + F RM+ + G E + + A+I Y+ A++ F +
Sbjct: 143 EEGLAQFCRMQELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGK 202
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
+ ++V WN MI GF ++ ++L+L+ K + + TG A
Sbjct: 203 LENRS---NIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEV 259
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
+ GR++H V +M D + ++L+ MY+K GS++DA+ +F+ K V NAMI
Sbjct: 260 LDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISA 319
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE-- 406
+ +G ++ L+ +M + T+ S+LS CS H ++++ ++
Sbjct: 320 FIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSN 379
Query: 407 ----------------------IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
+F +MKER V + ++ C++ R +A DL
Sbjct: 380 VAIQSALLTMYYKCGSTEDADSVFYTMKERDVVA-----WGSMIAGFCQNRRFKDALDLF 434
Query: 445 R 445
R
Sbjct: 435 R 435
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 191/441 (43%), Gaps = 76/441 (17%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPN-- 75
LL C L G+ +HA + T L + + L+ +Y CG + SA VFDK+
Sbjct: 61 LLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESR 120
Query: 76 ---PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
P++ + N ++ G+F+E + F M+E + G
Sbjct: 121 DSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELSW-------------------YMAG 161
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER-DVVSWTSMISGYCN 191
+Q+H + FE D + ALI MYS C A +F + R ++V+W MI G+
Sbjct: 162 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 221
Query: 192 VSKVDEAVVLFERMKLE-----------------------------------GLEPNQFT 216
++++ L+ K E + + +
Sbjct: 222 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 281
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
+++ YA+ G A F ++ + ++ NAMIS F + R +AL L+ M
Sbjct: 282 CTSLLTMYAKSGSVEDAKKVFDQVLDK----EVELRNAMISAFIGNGRAYDALGLYNKMK 337
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
++ T++ +L + GS GR +HA V + + +V SAL+ MY KCGS +
Sbjct: 338 AGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTE 397
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA-- 394
DA ++F + ++V +W +MI + ++ +++LF M +EG++A+ + SV+SA
Sbjct: 398 DADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGL 457
Query: 395 ---------CSHGGLVEKGLE 406
HG +++GLE
Sbjct: 458 GLENVELGHLIHGFAIKRGLE 478
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 184/620 (29%), Positives = 298/620 (48%), Gaps = 120/620 (19%)
Query: 19 LLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C++S++ R + VHA L+ + IF ++++L+ VY C ++ AR +FD++P
Sbjct: 21 LLDSCLRSRSARGTRLVHARILMTQFSMEIF-IQNRLIDVYGKCDCLDDARKLFDRMPQR 79
Query: 77 NVFMLN-----------------------------WMVMASAFTGN--FQEAIGYFSLMR 105
N F N W M S F + F+E++ YF M
Sbjct: 80 NTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMH 139
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ--------MG-------------- 143
+ N+++F L AC GL+D+ G QVHA+ ++ MG
Sbjct: 140 REDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVA 199
Query: 144 ---------FENDVSVGNALIDMY--------------------------------SKCG 162
E ++ N+LI Y S C
Sbjct: 200 CAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACA 259
Query: 163 LLCS--------ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ 214
LC+ AR V F D+V +++ Y SKV+EA +F+RM + N
Sbjct: 260 SLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIR----NV 315
Query: 215 FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
+ ++++ YAR AA FS+MT ++V+WNA+I+G+ Q+ EAL+LF+
Sbjct: 316 VSETSMVSGYARAASVKAARFMFSKMTQR----NVVSWNALIAGYTQNGENEEALRLFRL 371
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI------DVFTGSALIDM 328
+ I P + T +L A + +GR+ H V + G D+F G++LIDM
Sbjct: 372 LKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDM 431
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y KCGS++D +FE + ++ SWNA+I Y ++G ++++F +ML G + + VT+
Sbjct: 432 YMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTM 491
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
I VL ACSH GLVE+G F SM+E +G+ K+HY C+VD+L R+G + EA +L+ +P
Sbjct: 492 IGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMP 550
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
+ + G+ C +HG ++ E+ E+ +V+LSN+ A G W +
Sbjct: 551 VNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVR 610
Query: 509 LRKIMKEKNVQKQPGFSRVE 528
+RK+M+++ V KQPG S +E
Sbjct: 611 VRKLMRQQGVTKQPGCSWIE 630
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 202/419 (48%), Gaps = 50/419 (11%)
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
L+R+ +Y N F+ +L +C+ + + VHA F ++ + N LID+Y KC
Sbjct: 6 LVRD-LYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCD 64
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
L AR++F M +R+ +W S+IS +DEA LF M EP+Q ++N++++
Sbjct: 65 CLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMP----EPDQCSWNSMVS 120
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+A+ + +F +M E F+ + ++ + +S A G++
Sbjct: 121 GFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACA-------------GLM------ 161
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ +G ++HALV + DV+ GSALIDMYSKCGS+ A +F
Sbjct: 162 ----------------DLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVF 205
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+N+ +WN++I CY ++G ++E+F RM++ G+ +EVTL SV+SAC+ ++
Sbjct: 206 SGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALK 265
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
+GL+I + + + +VDM + ++ EA +D + + SM +
Sbjct: 266 EGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGY 325
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
++ R + F +M R + L +GE EA L +++K +++
Sbjct: 326 ARAASVKAARFM-------FSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESI 377
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 179/379 (47%), Gaps = 51/379 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHA-LLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C AL++G Q+HA ++ TN + L + LV +YA C VN AR VFD++
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Query: 74 PNPNV--------------------FM---------LNWMVMASAFT--GNFQEAIGYFS 102
NV FM ++W + + +T G +EA+ F
Sbjct: 311 SIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFR 370
Query: 103 LM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE------NDVSVGNALI 155
L+ RE I+ + +TF +L AC L D+ G+Q H + GFE +D+ VGN+LI
Sbjct: 371 LLKRESIWPTH-YTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLI 429
Query: 156 DMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF 215
DMY KCG + RVF M ERD VSW ++I GY EA+ +F +M + G +P+
Sbjct: 430 DMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHV 489
Query: 216 TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
T ++ + + G +F M G +P + M+ ++ NEA L + M
Sbjct: 490 TMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAM 549
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI---DMYSKC 332
V+ P+ V +L A + G+I++G+ HA L ID + + +MY++
Sbjct: 550 PVN---PDAVVWGSLLAACKVHGNIEMGK--HA--AEKLLEIDPWNSGPYVLLSNMYAEL 602
Query: 333 GSLKDARTLFEITRIKNVA 351
G D + ++ R + V
Sbjct: 603 GRWGDVVRVRKLMRQQGVT 621
>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 279/533 (52%), Gaps = 47/533 (8%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYF-SLMR 105
L + L+ Y G + AR +FD++P +V + W M S +T + +A F +++
Sbjct: 46 LATDLLKSYFERGLTSQARNLFDEMPERDV--VAWTTMISGYTHCNEYTQAWSVFVDMVK 103
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF-ENDVSVGNALIDMYSKCGL- 163
N FT S VLKAC G+ + G+ VH +A + F E + V NAL+DMY+ CG+
Sbjct: 104 NGNDPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVG 163
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG--LEPNQFTY---- 217
+ A VFH + E++VVSWT++I+GY + + A+ +F M L+G L P+ +
Sbjct: 164 MRDACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRA 223
Query: 218 -----------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
N+I+ Y R G + A +F+ MT + D
Sbjct: 224 CASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEK----D 279
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
L+TWN +I+G+ +S E +F M G PN T T ++ A ++Q G+++H
Sbjct: 280 LITWNTLIAGYERSD-SIEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHG 338
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
+ R GL ++ +ALIDMY+KCG++ D++ F N+ SW +M+ YG HG
Sbjct: 339 GIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKE 398
Query: 369 SIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
++ELF+ M+ G+R ++V ++VL ACSH GLV++GL M Y +K ++E Y CVV
Sbjct: 399 AVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVV 458
Query: 429 DMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
D+L R GR+ +AY L+R +P S+ GA C H L ++ + +
Sbjct: 459 DLLGRPGRVEDAYQLIRSMPFMADESVWGALLGACKAHNFSRLGKLAAKKALALRPNMVE 518
Query: 489 GFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNE 541
+VMLSNI AA+G+W EA +RK+MK +K G S +E RN+ V N+
Sbjct: 519 TYVMLSNIYAAEGKWGEAARMRKLMKRAGCRKVAGRSWIEVRNQVYSFVVGNK 571
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 29 LRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+ G+QVH + L+ L + L+ +YA CG++ ++ F ++ N+ M++
Sbjct: 330 LQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIG 389
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHAVATQMGFE 145
G +EA+ F M R ++ F VL AC GL+D + + ++ + +
Sbjct: 390 YGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVD-QGLRYINCMINDYHIK 448
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYC 190
+ + ++D+ + G + A ++ M F D W +++ G C
Sbjct: 449 PNQEIYGCVVDLLGRPGRVEDAYQLIRSMPFMADESVWGALL-GAC 493
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 176/553 (31%), Positives = 275/553 (49%), Gaps = 37/553 (6%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGD 62
R I +N S N LL S +L + + + D +++ ++ +A G
Sbjct: 93 RAIPRPDNYSYN---TLLHALAVSSSLADARGLFDEMPVRDSVTYNV---MISSHANHGL 146
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF-IYRCNKFTFSIV-- 119
V+ AR FD P + N M+ A G +EA G F+ E+ + N V
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQW 206
Query: 120 --LKACVGLLDIKKGKQV--------------HAVATQMGFE----NDVSVGNALIDMYS 159
+ L D G+ V V + F+ DV A++ Y+
Sbjct: 207 GKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYA 266
Query: 160 KCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNA 219
+ G+L ARRVF M ER+ VSW +M++ Y +DEA LF M N ++N
Sbjct: 267 QNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWNT 322
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YA+ G A A F M + D V+W AM++ ++Q E L+LF M G
Sbjct: 323 MLTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCG 378
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
N VL +++ G ++H + R G + F G+AL+ MY KCG+++DAR
Sbjct: 379 EWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDAR 438
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
FE ++V SWN MI Y +HG ++E+F+ M + +++TL+ VL+ACSH G
Sbjct: 439 NAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 498
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVEKG+ F SM +GV EHY C++D+L R+GR+ EA+DL++ +P ++M GA
Sbjct: 499 LVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGAL 558
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
IH +L + E+ FE+ +V+LSNI A+ G+W +A +R +M+E+ V+
Sbjct: 559 LGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVK 618
Query: 520 KQPGFSRVEKRNE 532
K PGFS +E +N+
Sbjct: 619 KVPGFSWIEVQNK 631
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 174/371 (46%), Gaps = 25/371 (6%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
S + ++ Y+ G + A +F IP P+ + N ++ A A + + +A G F M
Sbjct: 70 STYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMP-- 127
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
+ + I A GL+ + + + E D N ++ Y + G + A
Sbjct: 128 VRDSVTYNVMISSHANHGLVSLARHY------FDLAPEKDAVSWNGMLAAYVRNGRVEEA 181
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR 227
R +F+ E DV+SW +++SGY K+ EA LF+RM + ++N +++ YARR
Sbjct: 182 RGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDV----VSWNIMVSGYARR 237
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
GD A F V D+ TW A++SG+AQ+ EA ++F M N V
Sbjct: 238 GDMVEARRLFDAAP----VRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMV 293
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
+Q + + ++ + + CR +V + + ++ Y++ G L++A+ +F+
Sbjct: 294 AAYIQRRMMDEAKEL---FNMMPCR-----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQ 345
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
K+ SW AM+ Y + G + +++LF M G N VLS C+ +E G+++
Sbjct: 346 KDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQL 405
Query: 408 F-RSMKERYGV 417
R ++ YGV
Sbjct: 406 HGRLIRAGYGV 416
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 154/366 (42%), Gaps = 90/366 (24%)
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
E +V N I + + G + A R+F M R ++ +M++GY ++ A LF
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 204 RMK----------LEGLE---------------P--NQFTYNAIIASYARRGDSNAAFAF 236
+ L L P + TYN +I+S+A G + A +
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 237 FSRMTAEGFVP---------------------------DLVTWNAMISGFAQSKRENEAL 269
F + V D+++WNA++SG+ Q + +EA
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEAR 213
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
+LF M + N+ V+G + G + ++ R A R DVFT +A++ Y
Sbjct: 214 ELFDRMPGRDVVSWNIMVSGYARRGDM---VEARRLFDAAPVR-----DVFTWTAVVSGY 265
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER-------------- 375
++ G L++AR +F+ +N SWNAM+ Y + M+D + ELF
Sbjct: 266 AQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLT 325
Query: 376 ------MLEEGM-------RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
MLEE + + V+ ++L+A S GG E+ L++F M R G +++
Sbjct: 326 GYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMG-RCGEWVNRS 384
Query: 423 HYACVV 428
+ACV+
Sbjct: 385 AFACVL 390
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/447 (34%), Positives = 250/447 (55%), Gaps = 34/447 (7%)
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+LK C L + +GK +HA+ F +D+ + N L+++Y+KCG L AR++F M RD
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG---------- 228
VV+WT++I+GY + +A++L M GL+PNQFT +++ + + G
Sbjct: 81 VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140
Query: 229 ---------DSN-----AAFAFFSR---MTAEGFVPDL------VTWNAMISGFAQSKRE 265
DSN A ++R + + D+ V+WNA+I+G+A+ +
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
++A LF ML +KP + T + VL A GS++ G+ +HAL+ + G + F G+ L
Sbjct: 201 DKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTL 260
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
+DMY+K GS++DA+ +F+ ++V SWN+M+ Y +HG+ +++ FE ML + N+
Sbjct: 261 LDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPND 320
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
+T + VL+ACSH GL+++G F MK +Y V+ HY +VD+L R+G + A +
Sbjct: 321 ITFLCVLTACSHAGLLDEGRHYFDMMK-KYNVEPQISHYVTMVDLLGRAGHLDRAIQFIS 379
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
++P+ T ++ GA C +H +L E FE+ P V+L NI A G W++
Sbjct: 380 EMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWND 439
Query: 506 AENLRKIMKEKNVQKQPGFSRVEKRNE 532
A +RK+MKE V+K+P S VE NE
Sbjct: 440 AAKVRKMMKESGVKKEPACSWVEMENE 466
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 185/384 (48%), Gaps = 43/384 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL +C L +GK +HALL + + +++ L+ +YA CGD+ AR +FD++ + +
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQV 135
V ++ + Q+A+ M + N+FT + +LKA VG D+ +G+Q+
Sbjct: 81 VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + + G++++V V A++DMY++C L A+ +F M ++ VSW ++I+GY +
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIAS-------------------------------- 223
D+A LF M E ++P FTY++++ +
Sbjct: 201 DKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTL 260
Query: 224 ---YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
YA+ G A F R+ D+V+WN+M++G++Q AL+ F+ ML + I
Sbjct: 261 LDMYAKSGSIEDAKKVFDRLAKR----DVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRI 316
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
PN++T VL A G + GR ++ + + + ++D+ + G L A
Sbjct: 317 APNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQ 376
Query: 341 LFEITRIKNVAS-WNAMIGCYGKH 363
IK A+ W A++G H
Sbjct: 377 FISEMPIKPTAAVWGALLGACRMH 400
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 149/316 (47%), Gaps = 9/316 (2%)
Query: 26 SKALRQGKQVHALLCTN---DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
S + QG+Q+H L C D N++ + ++ +YA C + A+L+FD + + N N
Sbjct: 131 STDVLQGRQLHGL-CLRYGYDSNVY-VSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWN 188
Query: 83 WMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
++ A G +A FS M + FT+S VL AC + +++GK VHA+ +
Sbjct: 189 ALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKW 248
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G + VGN L+DMY+K G + A++VF + +RDVVSW SM++GY A+ F
Sbjct: 249 GEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRF 308
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
E M + PN T+ ++ + + G + +F M P + + M+ ++
Sbjct: 309 EEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRA 368
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
+ A++ M IKP +L A + ++++G + + H T
Sbjct: 369 GHLDRAIQFISEM---PIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYP-GTH 424
Query: 323 SALIDMYSKCGSLKDA 338
L ++Y+ G DA
Sbjct: 425 VLLYNIYALAGRWNDA 440
>gi|222637655|gb|EEE67787.1| hypothetical protein OsJ_25518 [Oryza sativa Japonica Group]
Length = 588
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 281/525 (53%), Gaps = 44/525 (8%)
Query: 33 KQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
+Q+HAL + L ++F + + LV Y+ G + AR VFD +P ++ N ++ A
Sbjct: 31 RQLHALAWRSGLAADVF-VGNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQ 89
Query: 91 TGNFQ-EAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
G+ E IG F ++R+ + ++ + V+ AC G ++ G+QVH A ++G E V
Sbjct: 90 DGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYV 149
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
S+GN L+ MY KCG SARR+F M ERDVVSWT+ IS ++A+ LF M+ +
Sbjct: 150 SIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAIS-----MDGEDALTLFNGMRRD 204
Query: 209 GLEPNQFTYNAIIASY-------------------ARRGDSNAA------FAFFSRMTAE 243
G+ PN+ T+ A++++ A G++ A+ +A RM
Sbjct: 205 GVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDA 264
Query: 244 GFVPDL------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA--GG 295
V DL + WNA+ISG+AQ+ R N+AL+LF M + PN T VL A
Sbjct: 265 RMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSM-ARCLTPNETTFASVLSAVTAV 323
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
T S+ G+ H+ MG + ALIDMY+K G+L+++R F T +++ +W A
Sbjct: 324 ETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTA 383
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
+I +HG + + LF M G+ + V L++VL+AC +GG+V+ G +IF SM
Sbjct: 384 IISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAADR 443
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTM 475
GV++ EHY+CVVDML R+GR+ EA +L+ ++P + S + C IHG ++ +
Sbjct: 444 GVELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGACRIHGDAEIGERI 503
Query: 476 GEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
E + +V+LSNI A G+W +R+ M++K Q+
Sbjct: 504 ARILTEKEPTESGAYVLLSNIYADVGDWDGVAKVRRKMRDKRRQE 548
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 91/160 (56%), Gaps = 8/160 (5%)
Query: 275 MLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
ML SG ++P+ VT T L G + R++HAL R GL DVF G+AL+ YS+ G
Sbjct: 1 MLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVGNALVTAYSRGG 60
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS-IELFERMLEEG-MRANEVTLISV 391
SL +AR++F+ +++ SWNA+I + G + I +F RML +G ++ + +++ SV
Sbjct: 61 SLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSV 120
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
+ AC G +E G ++ + VK+ E Y + ++L
Sbjct: 121 IPACGGEGKLELGRQV-----HGFAVKLGVEGYVSIGNVL 155
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 178/561 (31%), Positives = 287/561 (51%), Gaps = 48/561 (8%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFD 71
V+ L + C A+ +G ++H + + L+I S+++ L+ +YA D+ A +FD
Sbjct: 136 VSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFD 194
Query: 72 KIPNPNVFMLNWMVMASAF--TGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLD 128
++ +V ++W VM + TG + A+ F + + T VLKAC D
Sbjct: 195 EMCERDV--ISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGD 252
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
I G+ VH V G + D+ VGN++IDMYSKC SA + F+ M R+ VSW S+ISG
Sbjct: 253 ISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISG 312
Query: 189 YCNVSKVDEAVVLFERMKLEGL-----------------------------------EPN 213
K EA+ LF M G E N
Sbjct: 313 LVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELN 372
Query: 214 QFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
+F N++I +Y++ A+ F R+ + D V+W+AMI+GF + +EA+ LF+
Sbjct: 373 EFVINSLIDAYSKCDLIELAWKLFDRLKTK----DTVSWSAMIAGFNHCGKPDEAIALFQ 428
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
M + KPN VT+ +L+A ++ ++ + H + R GL +V G+A++DMY+KCG
Sbjct: 429 EMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCG 488
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
+ +R F+ KN+ SW AMI G +G+ ++ L M G++ N VT +SVLS
Sbjct: 489 EIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLS 548
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP--MYV 451
ACSHGGLVE+GL F +M + +GV+ EHY+C+VDML R+G++ A +L+ ++P M
Sbjct: 549 ACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRD 608
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRK 511
+ GA + C G L E+ + G+ + S++ AA G W +A +R
Sbjct: 609 GAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRW 668
Query: 512 IMKEKNVQKQPGFSRVEKRNE 532
++K + V+ G+S V ++
Sbjct: 669 LVKARGVRVVAGYSLVHVEDK 689
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 234/516 (45%), Gaps = 59/516 (11%)
Query: 29 LRQGKQVHALL--CTNDLNIFSLKS---KLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
L VH++L C++ SL S ++ Y G ++SA VFD + + + N
Sbjct: 47 LTDPTLVHSILKACSSLPGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNI 106
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
M+ G + + +F R + N T + + AC L +++G ++H + G
Sbjct: 107 MIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSG 166
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
F + SV N+L+ MY+ + A +F M ERDV+SW+ MI GY + A+ LF
Sbjct: 167 FLDIPSVQNSLLSMYADNDME-RAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFL 225
Query: 204 RMK------------------------------------LEGLEPNQFTYNAIIASYARR 227
M GL+ + F N+II Y++
Sbjct: 226 EMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKC 285
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
D +AF F+ M + V+WN++ISG ++++ +EAL LF M +G + + VT+
Sbjct: 286 DDHESAFKAFNEMPCR----NTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTL 341
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
+LQ+ + IH++V R G ++ F ++LID YSKC ++ A LF+ +
Sbjct: 342 VNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKT 401
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK---- 403
K+ SW+AMI + G D +I LF+ M + + N VT++S+L A S +++
Sbjct: 402 KDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWA 461
Query: 404 -GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
G+ I R + V + ++DM + G + + Q+P S GA
Sbjct: 462 HGIAIRRGLAAEVAVGTA------ILDMYAKCGEIGLSRKAFDQIPEKNIVSW-GAMIAA 514
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
C ++G A+ + E GL KP+ LS + A
Sbjct: 515 CGMNGLARDALALLSEMKLHGL-KPNVVTTLSVLSA 549
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/556 (30%), Positives = 274/556 (49%), Gaps = 66/556 (11%)
Query: 35 VHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNF 94
+ LL T+ ++IF+L L ++ A +F +IP P + N M+ + T
Sbjct: 721 IKELLPTDPISIFNL---LKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQP 777
Query: 95 QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNAL 154
EAI ++LM N T+ +LKAC + ++ VHA ++GF++D+ V NAL
Sbjct: 778 IEAIRNYNLMYSQALFGNNLTYPFLLKACARISNV-SCTTVHARVLKLGFDSDLFVSNAL 836
Query: 155 IDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL------- 207
I Y+ L AR+VF M ERD+VSW S+I GY + E +V+FE M++
Sbjct: 837 IHGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDA 896
Query: 208 -----------------------EGLEPNQ-----FTYNAIIASYARRGDSNAAFAFFSR 239
E +E N+ + N +I Y RR + A F R
Sbjct: 897 VTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDR 956
Query: 240 MTAEGFVP---------------------------DLVTWNAMISGFAQSKRENEALKLF 272
M V D+++W +MIS ++Q+ + +A++LF
Sbjct: 957 MRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLF 1016
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
+ M+V+ +KP+ +TV VL A G++ +G +H + + ++ D++ G+ALIDMY KC
Sbjct: 1017 QEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKC 1076
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G+++ ++FE ++ SW ++I +G DS++ LF ML EG+R T + VL
Sbjct: 1077 GAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVL 1136
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
AC+H G+V+KGLE F SM+ YG+ +HY CVVD+L RSG + AY+ ++++PM
Sbjct: 1137 LACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPD 1196
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
+ + +HG LA ++ E +++ SN A W + +R++
Sbjct: 1197 VVVWRILLSASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRL 1256
Query: 513 MKEKNVQKQPGFSRVE 528
M+E NV K S VE
Sbjct: 1257 MEESNVHKPSASSSVE 1272
>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
Length = 591
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 276/568 (48%), Gaps = 55/568 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK------------LVGVYAGCGDVNSA 66
LL C + LR G +HA + N + S+ LV +YA CG A
Sbjct: 17 LLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYARCGRREDA 76
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS-LMREFIYRCNKFTFSIVLKACV- 124
VFD++ + N ++ AS G+ A+ F ++R C++ TF+ VL C
Sbjct: 77 ARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDRATFTTVLSECAR 133
Query: 125 -GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
G + VH + GFE +V VGNAL+ Y +CG SA RVFHGM E++V++WT
Sbjct: 134 AGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWT 193
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE 243
+MISG E+ LF +M + ++ N TY+ + + AR + +
Sbjct: 194 AMISGMARAELYKESFSLFGQM-IRTVDANNATYSCALLACARSLAAREGQQVHGLVVKA 252
Query: 244 GF-------------------------------VPDLVTWNAMISGFAQSKRENEALKLF 272
GF PD V ++ GFAQ+ E +A +LF
Sbjct: 253 GFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELF 312
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
M+ +G + + TV+ VL A G + +G++IHALV + ++ + + L++MYSKC
Sbjct: 313 AEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKC 372
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G L+++ +F+ KN SWN++I + +HG +LFE M +G + +VT +S+L
Sbjct: 373 GELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLL 432
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
ACSH G +KGLEI SM +YGV EHYACVVDML R+G + +A + P
Sbjct: 433 HACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDN 492
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
+ A C+ HG ++ E+ + +V+LSNI +++G W + + K
Sbjct: 493 ALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTAAYVLLSNIYSSEGRWDDRAKVMKR 552
Query: 513 MKEKNVQKQPGFSRVEKRNEFVEKEVQN 540
M E ++K G S +E +EKEV +
Sbjct: 553 MSEMGLRKDTGKSWIE-----LEKEVHS 575
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 119/237 (50%), Gaps = 8/237 (3%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCT----NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
C L C +S A R+G+QVH L+ +DL++ +S L+ VY+ CG + A VF
Sbjct: 228 CALLACARSLAAREGQQVHGLVVKAGFEDDLHV---ESGLMDVYSKCGLMEDALTVFRSC 284
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P+ L +++ A G ++A F+ M ++ T S VL A GK
Sbjct: 285 REPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGK 344
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+HA+ + F + V N L++MYSKCG L + RVF M ++ VSW S+I+ +
Sbjct: 345 QIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHG 404
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDL 249
E LFE MK +G +P T+ +++ + + G + + M+++ G +P +
Sbjct: 405 HGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRM 461
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSAR 67
N + N + +LG S GKQ+HAL+ + + + + LV +Y+ CG++ +
Sbjct: 320 NEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESV 379
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
VFD++P+ N N ++ A A G+ E F M+ + TF +L AC +
Sbjct: 380 RVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVG 439
Query: 128 DIKKGKQV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH-GMFERDVVSWTSM 185
KKG ++ +++++Q G + ++DM + GLL A+ G F + + W ++
Sbjct: 440 SAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDNALLWQAL 499
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-YARRGDSNAAFAFFSRMTAEG 244
+ G C+ E V + KL L+P+ ++++ Y+ G + RM+ G
Sbjct: 500 M-GACSFHGNSE-VGKYAAEKLLLLDPSCTAAYVLLSNIYSSEGRWDDRAKVMKRMSEMG 557
Query: 245 FVPD 248
D
Sbjct: 558 LRKD 561
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG-----------SALIDMYSK 331
N +G+L + G G +++G +HA V + H + ++L+ MY++
Sbjct: 10 NYARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYAR 69
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA-NEVTLIS 390
CG +DA +F+ R+++ SWN++I G ++ LF RML RA + T +
Sbjct: 70 CGRREDAARVFDEMRVRDAVSWNSLIAASRGAG---DALALFRRMLRSDARACDRATFTT 126
Query: 391 VLSACSHGG 399
VLS C+ G
Sbjct: 127 VLSECARAG 135
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 266/517 (51%), Gaps = 40/517 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL K K+ Q HA+ + F + +L+ VY ++ A +F NPNV
Sbjct: 32 LLHKNRKNPKHVQSIHCHAIKTRTSQDPF-VAFELLRVYCKVNYIDHAIKLFRCTQNPNV 90
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
++ ++ G++ +AI F M + + + +LKACV + GK+VH +
Sbjct: 91 YLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGL 150
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ G D S+ L+++Y KCG+L AR++F GM ERDVV+ T MI + V+EA
Sbjct: 151 VLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEA 210
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
+ +F M D V W +I G
Sbjct: 211 IEVFNEMGTR---------------------------------------DTVCWTMVIDG 231
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
++ N L++F+ M V G++PN VT VL A G++++GR IHA + + G+ ++
Sbjct: 232 LVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVN 291
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
F ALI+MYS+CG + +A+ LF+ R+K+V+++N+MIG HG ++ELF ML+
Sbjct: 292 RFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLK 351
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
E +R N +T + VL+ACSHGGLV+ G EIF SM+ +G++ EHY C+VD+L R GR+
Sbjct: 352 ERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLE 411
Query: 439 EAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
EA+D + ++ + + M + + C IH + + + E F+MLSN A
Sbjct: 412 EAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSFIMLSNFYA 471
Query: 499 ADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
+ G W A +R+ M++ + K+PG S +E N E
Sbjct: 472 SLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHE 508
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 18 CLLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C+L C + AL G+ +HA + C ++N F + L+ +Y+ CGD++ A+ +FD +
Sbjct: 262 CVLSACAQLGALELGRWIHAYMRKCGVEVNRF-VAGALINMYSRCGDIDEAQALFDGVRV 320
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV--GLLDIKKGK 133
+V N M+ A G EA+ FS M + R N TF VL AC GL+D+ G+
Sbjct: 321 KDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDL-GGE 379
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
++ G E +V ++D+ + G L
Sbjct: 380 IFESMEMIHGIEPEVEHYGCMVDILGRVGRL 410
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/542 (30%), Positives = 278/542 (51%), Gaps = 43/542 (7%)
Query: 29 LRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L GKQ+H + + F S+ + + +Y G VN AR +F ++ ++ N ++
Sbjct: 313 LELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISG 372
Query: 88 SAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIK-KGKQVHAVATQMGFE 145
A +G + ++ F L+R + ++FT + VL+AC L + G+QVH A + G
Sbjct: 373 CARSGLEECSLRLFIDLLRSGLLP-DQFTITSVLRACSSLEESYCVGRQVHTCALKAGIV 431
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
D V ALID+YSK G + A +FH D+ SW +M+ G+ EA+ LF M
Sbjct: 432 LDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLM 491
Query: 206 KLEGLEPNQFTY-----------------------------------NAIIASYARRGDS 230
G + +Q T+ + I+ Y + G+
Sbjct: 492 HERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEM 551
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+A F+++ + PD V W +ISG ++ E +AL + M ++G++P+ T +
Sbjct: 552 KSARKVFNQIPS----PDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATL 607
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
++A L +++ G++IHA + ++ D F ++L+DMY+KCG+++DA LF ++V
Sbjct: 608 VKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSV 667
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
A WNAMI +HG + ++ F M G+ + VT I VLSACSH GL + F S
Sbjct: 668 ALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDS 727
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M++ YGV+ EHY+C+VD L R+G + EA ++ +P + +M N C + G ++
Sbjct: 728 MQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKE 787
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+ E+ F M +V+LSNI AA +W A + R +MK NV+K+PGFS ++ +
Sbjct: 788 TGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMK 847
Query: 531 NE 532
N+
Sbjct: 848 NK 849
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 210/438 (47%), Gaps = 19/438 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP--N 75
+L + L GK+ HA++ T+ LN + + L+ +YA CG + SAR +FD P +
Sbjct: 19 ILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSD 78
Query: 76 PNVFMLNWMVMASAFTGNFQ------EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
++ N ++ A A TG EA F L+R+ + + T S + K C+
Sbjct: 79 RDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSP 138
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
+ + A ++G + DV V AL+++Y+K + AR +F M RDVV W M+ Y
Sbjct: 139 SASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAY 198
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG----DSNAAFAFFSRMTAEGF 245
+ DE + LF GL P+ + I+ ++ + A+ +++
Sbjct: 199 VEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDD 258
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
D+ WN +S + Q+ EA+ F+ M+ S + +++T +L +++G++
Sbjct: 259 DSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQ 318
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
IH V R G V ++ I+MY K GS+ AR +F + ++ SWN +I + G+
Sbjct: 319 IHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGL 378
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE---RYGVKISKE 422
+ S+ LF +L G+ ++ T+ SVL ACS +E+ + R + + G+ +
Sbjct: 379 EECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCALKAGIVLDSF 435
Query: 423 HYACVVDMLCRSGRMVEA 440
++D+ + G+M EA
Sbjct: 436 VSTALIDVYSKGGKMEEA 453
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 171/425 (40%), Gaps = 84/425 (19%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH--G 173
FSI L+ + D+ GK+ HAV G D V N LI MY+KCG L SAR++F
Sbjct: 17 FSI-LRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITP 75
Query: 174 MFERDVVSWTSMISGYC------NVSKVDEAVVLFERMKLE------------------- 208
+RD+V++ ++++ Y +V K EA +F ++
Sbjct: 76 QSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLY 135
Query: 209 ----------------GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
GL+ + F A++ YA+ A F RM V D+V W
Sbjct: 136 GSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMP----VRDVVLW 191
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N M+ + + +E L LF SG++P+ V+V +L G+ RE+ +
Sbjct: 192 NVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILM--GVGKKTVFERELEQVRAY 249
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
A LF +V WN + Y + G +++
Sbjct: 250 -------------------------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDC 284
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F M++ + + +T I +LS + +E G +I ++ R+G ++M
Sbjct: 285 FRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVV-RFGWDQFVSVANSAINMYV 343
Query: 433 RSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
++G + A + +++V + N++ +GC G + ++ + + GL PD
Sbjct: 344 KAGSVNYARRMFGQMKEVDLISWNTVI----SGCARSGLEECSLRLFIDLLRSGLL-PDQ 398
Query: 490 FVMLS 494
F + S
Sbjct: 399 FTITS 403
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 19 LLGKCMKSKALRQGKQVHA----LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L+ C AL QGKQ+HA L C D + + LV +YA CG++ A +F ++
Sbjct: 607 LVKACSLLTALEQGKQIHANIMKLNCAFDPFVM---TSLVDMYAKCGNIEDAYGLFRRMN 663
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL-LDIKKGK 133
+V + N M++ A GN +EA+ +F+ M+ ++ TF VL AC L K
Sbjct: 664 TRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYK 723
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
++ G E ++ + L+D S+ G + A +V M FE + ++++ C V
Sbjct: 724 NFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNA-CRV 782
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/479 (32%), Positives = 241/479 (50%), Gaps = 71/479 (14%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC-------------- 161
+S ++++C+ +++GK+VH GF + + N L++MY+KC
Sbjct: 73 YSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMP 132
Query: 162 -----------------GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
GLL A+ +F M ERD SWT+MISGY + +EA+ LF
Sbjct: 133 ERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRM 192
Query: 205 MKLE------------------------------------GLEPNQFTYNAIIASYARRG 228
MK GL+ ++ ++A+ Y + G
Sbjct: 193 MKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCG 252
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
A F +M D+VTW AMI + Q R E LF +L SGI+PN T +
Sbjct: 253 SIEEARHIFDKMVDR----DIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFS 308
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
GVL A S ++G+++H + R+G F SAL+ MYSKCG++ A +F+ T
Sbjct: 309 GVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQP 368
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
++ SW ++I Y ++G D +I FE +++ G + + +T + VLSAC+H GLV+KGL+ F
Sbjct: 369 DLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYF 428
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
S+KE+YG+ + +HYAC++D+L RSG+ EA +++ ++ M + + GC IHG
Sbjct: 429 HSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGN 488
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
LA E FE+ P +V L+NI A G W E +RK M ++ V K+PG S +
Sbjct: 489 LKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWI 547
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 225/486 (46%), Gaps = 75/486 (15%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGC 60
+++ I+ S + L+ C+KS+ L+QGK+VH + + +F L ++L+ +YA C
Sbjct: 60 QILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFIL-NRLLEMYAKC 118
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE---FIY-------- 109
+ ++ +FD++P ++ N ++ A G QEA F M E F +
Sbjct: 119 DSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYV 178
Query: 110 ---------------------RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
+ NKFT S L A + ++ GK++H + G ++D
Sbjct: 179 RHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDE 238
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
V +AL DMY KCG + AR +F M +RD+V+WT+MI Y + E LF +
Sbjct: 239 VVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRS 298
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF----------------------- 245
G+ PN+FT++ ++ + A + MT GF
Sbjct: 299 GIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSA 358
Query: 246 --------VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
PDL +W ++I+G+AQ+ + +EA++ F+ ++ SG +P+++T GVL A
Sbjct: 359 ERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHA 418
Query: 298 GSIQIGRE-IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK-NVASWNA 355
G + G + H++ + GL + +ID+ ++ G +A + +K + W +
Sbjct: 419 GLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWAS 478
Query: 356 MIGCYGKHGMVDSSIELFERMLE---EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
++G HG +++L +R E E N T +++ + + G+ + +I ++M
Sbjct: 479 LLGGCRIHG----NLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMD 534
Query: 413 ERYGVK 418
+R VK
Sbjct: 535 DRGVVK 540
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 12/191 (6%)
Query: 235 AFFSRMTAEG-FVPDLVT---WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
FF T + VP L ++ I Q R EAL++ + KP+ + +
Sbjct: 21 TFFKSNTKDTTLVPHLCNHKRFDEAIHILCQQNRLKEALQILHQI----DKPSASVYSTL 76
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
+Q+ + +Q G+++H + G +F + L++MY+KC SL D++ LF+ +++
Sbjct: 77 IQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDL 136
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SWN +I Y K G++ + LF++M E + + +++S + LE+FR
Sbjct: 137 CSWNILISGYAKMGLLQEAKSLFDKMPER----DNFSWTAMISGYVRHDRPNEALELFRM 192
Query: 411 MKERYGVKISK 421
MK K +K
Sbjct: 193 MKRSDNSKSNK 203
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 280/523 (53%), Gaps = 19/523 (3%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVG---VYAGCGDVNSA 66
+S N + +L KC K+L + +Q+HA ++ TN LN S+L+ + G ++ A
Sbjct: 4 ISTNPVVSVLDKC---KSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYA 60
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI--VLKACV 124
VF +I +PN F+ ++ + T N E++ ++ M + + FSI VLKAC
Sbjct: 61 SSVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACG 120
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
LL +G+QVH + D VGN+++ MY G + ARRVF M RDVVSW S
Sbjct: 121 KLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNS 180
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEG 244
MI+GY +++ A LF+ M E + + NA+I Y + G A F M+ +
Sbjct: 181 MIAGYLKAGEIELASELFDEMP----ERDLVSCNAMIDGYGKCGRCELAEKVFETMSDK- 235
Query: 245 FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
D+VTW +MIS + Q++ +AL LF+ ML G++P+ + VL A G ++ G+
Sbjct: 236 ---DVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGK 292
Query: 305 EIHALVCRMGLHIDV-FTGSALIDMYSKCGSLKDARTLFE-ITRIKNVASWNAMIGCYGK 362
+HA V + + F GSALIDMYSKCG +++A +F I+ +N+ WN+MI
Sbjct: 293 WLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAI 352
Query: 363 HGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
HG+ ++++F M + NE+T + +LS CSHGGLVE+G F SM E+Y + +
Sbjct: 353 HGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQ 412
Query: 423 HYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM 482
HY C++D+ R+GR+ +A +++ +P A + HG ++ + E+
Sbjct: 413 HYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIEL 472
Query: 483 GLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
+V+LSNI A G W + +R +M+++ V+K G S
Sbjct: 473 APDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCS 515
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 286/599 (47%), Gaps = 81/599 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGC------GDVNSARLVFD 71
LL +C ++++ Q+HA L + ++ S+ S+L+ Y G + AR +FD
Sbjct: 16 LLRQC---RSIQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFD 72
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR---CNKFTFSIVLKACVGLLD 128
+IP P+ FM N +V A + + QEA+ L R + R N+FT VLKAC +
Sbjct: 73 RIPEPDRFMYNTLVRAYSNSDCPQEAL---RLHRGVLQRGILPNEFTLPFVLKACTTVRA 129
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
++ H V ++GF + V NAL+ ++ G L +RR F M +R+VVSW +MI G
Sbjct: 130 VEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGG 189
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------------- 217
Y +V EA LF M+ +GL + FT
Sbjct: 190 YAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVD 249
Query: 218 ----NAIIASYARRGDSNAAFAFFSRMTAEGFVP-------------------------- 247
NA++ Y + GD A F M + V
Sbjct: 250 RILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPE 309
Query: 248 -DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
++V+WNAMIS + Q R +E L L+ M GI P+ T+ GVL A G G + G+ I
Sbjct: 310 RNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMI 369
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H V V ++L+DMY++CG + A LF KNV SWN +IG HG
Sbjct: 370 HCYVRDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRA 429
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
++ F M+ + +E+T + +LSACSHGGL+E G F +M Y V+ EHY C
Sbjct: 430 QETVTFFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGC 489
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
+VD+L R G + +A +L++ + + + GA C IHG ++ + ++ E+
Sbjct: 490 MVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGNVEIGKLVIKQLLELEGIT 549
Query: 487 PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFVEKEVQNES 542
FV++ N+ +W + + LRK+MKE+ +K G S +E +N EF +++++ES
Sbjct: 550 GGLFVLICNLFYETNQWEDMKKLRKLMKEQGTKKDMGVSSIEVKNIIHEFGVEDLRHES 608
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 276/547 (50%), Gaps = 49/547 (8%)
Query: 23 CMKSKALRQGKQVHAL-----LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
C + +R G H L LC + S L+ +Y+ CG + AR++FD N
Sbjct: 309 CARQGEVRLGMVFHGLALKLGLCGE----LKVNSSLLDMYSKCGYLCEARVLFD-TNEKN 363
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMR----EFIYRCNKFTFSIVLKACVGLLDIKKGK 133
V N M+ + +F+ G F L+R E + N+ T VL C + K K
Sbjct: 364 VISWNSMIGGYSKDRDFR---GAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLK 420
Query: 134 QVHAVATQMGF-ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
++H A + GF ++D V NA + Y+KCG L A VF GM + V SW ++I G+
Sbjct: 421 EIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQN 480
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD---- 248
+A+ L+ M+ GLEP+ FT +++++ AR + M GF D
Sbjct: 481 GFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFIC 540
Query: 249 ---------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
LV WN MI+GF+Q++ +AL +F ML S I
Sbjct: 541 ISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIW 600
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ +++ G L A ++++G+E+H + L F +LIDMY+KCG ++ ++ +
Sbjct: 601 PDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNI 660
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ +K +WN +I YG HG +IELF+ M G R + VT I++L+AC+H GLV
Sbjct: 661 FDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLV 720
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
+GLE M+ +G+K EHYACVVDML R+GR+ EA +L+ ++P + + + +
Sbjct: 721 AEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLS 780
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C + D+ + + E+G K + +V++SN A G+W E +R+ MKE +QK
Sbjct: 781 SCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKD 840
Query: 522 PGFSRVE 528
G S +E
Sbjct: 841 AGCSWIE 847
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 140/503 (27%), Positives = 237/503 (47%), Gaps = 49/503 (9%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYA 58
+N ++ N+ + LL C + K + G+++H + T+ N L ++LV +Y+
Sbjct: 81 LNDVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYS 140
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLM---REFIYRCNK 113
C + LVF+ N+F+ W + S + N F++A+ F M EF+ +
Sbjct: 141 ICDSPYDSCLVFNASRRKNLFL--WNALLSGYLRNSLFRDAVFVFVEMISLTEFVP--DN 196
Query: 114 FTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
FT V+KACVG+ D++ G+ VH A + +DV VGNALI MY K G + SA +VF
Sbjct: 197 FTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDK 256
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERM--KLEGLEPNQFTYNAIIASYARRGDSN 231
M +R++VSW S++ +E+ LF+ + EGL P+ T +I AR+G+
Sbjct: 257 MPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVR 316
Query: 232 AAFAFFSRMTAEGFVPDL------------------------------VTWNAMISGFAQ 261
F G +L ++WN+MI G+++
Sbjct: 317 LGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEKNVISWNSMIGGYSK 376
Query: 262 SKRENEALKLFKGM-LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG-LHIDV 319
+ A +L + M + +K N VT+ VL +EIH R G + D
Sbjct: 377 DRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDE 436
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+A + Y+KCGSL A +F K V+SWNA+IG + ++G +++L+ M
Sbjct: 437 LVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGS 496
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G+ + T+ S+LSAC+ + G EI SM R G ++ + +V + + G+++
Sbjct: 497 GLEPDLFTIASLLSACARLKSLSCGKEIHGSML-RNGFELDEFICISLVSLYVQCGKILL 555
Query: 440 A---YDLLRQVPMYVTNSMAGAF 459
A +D + + + N+M F
Sbjct: 556 AKLFFDNMEEKNLVCWNTMINGF 578
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 189/416 (45%), Gaps = 27/416 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C + K+L GK++H + N +L+ F S LV +Y CG + A+L FD +
Sbjct: 508 LLSACARLKSLSCGKEIHGSMLRNGFELDEFICIS-LVSLYVQCGKILLAKLFFDNMEEK 566
Query: 77 NVFMLNWMVMASAFTGN-FQ-EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N ++ W M + F+ N F +A+ F M ++ + L AC + ++ GK+
Sbjct: 567 N--LVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKE 624
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H A + V +LIDMY+KCG + ++ +F + + V+W +I+GY
Sbjct: 625 LHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGH 684
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWN 253
+A+ LF+ M+ G P+ T+ A++ + G + +M + G P L +
Sbjct: 685 GRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYA 744
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
++ ++ R NEAL+L + KP++ + +L + + IG ++ + +
Sbjct: 745 CVVDMLGRAGRLNEALELVNEL---PDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLEL 801
Query: 314 GLHIDVFTGSALI-DMYSKCGSLKDARTLFEITRIKNVA-------SWNAMIGCYGKHGM 365
G D LI + Y++ G + R + + R+K + SW + G + +
Sbjct: 802 G--PDKAENYVLISNFYARLGKWDEVRKMRQ--RMKEIGLQKDAGCSWIEIGGKVSRFLV 857
Query: 366 VDSSI----ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
D S+ ++ + +E + N++ S H ++ ++I R+ E+ +
Sbjct: 858 GDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAI 913
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 123/236 (52%), Gaps = 6/236 (2%)
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
+L WNA++SG+ ++ +A+ +F M+ ++ P+N T+ V++A +++G +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H + + DVF G+ALI MY K G ++ A +F+ +N+ SWN+++ ++G+
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278
Query: 367 DSSIELFERML--EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY 424
+ S LF+ +L +EG+ + T+++V+ C+ G V G+ +F + + G+ +
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM-VFHGLALKLGLCGELKVN 337
Query: 425 ACVVDMLCRSGRMVEAYDLLRQVPMYVT--NSMAGAFRNGCNIHGRRDLAVTMGEE 478
+ ++DM + G + EA L V NSM G + + G +L M E
Sbjct: 338 SSLLDMYSKCGYLCEARVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQME 393
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/499 (32%), Positives = 257/499 (51%), Gaps = 32/499 (6%)
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
+A VFD+IP PN + N M + + ++ I F M+ N FTF ++LK+CV
Sbjct: 3 NAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCV 62
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
+ +K+G++VH + GF + V LIDMY+ G + +A RVF M ER+V++WT+
Sbjct: 63 KINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTA 122
Query: 185 MISGY---CNVSKV--------DEAVVLFERMKLEGLE--------------PNQ--FTY 217
MI+GY C++ + +VL+ M +E PN+ ++
Sbjct: 123 MINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSW 182
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
N ++ YA GD A F M ++ +WNA+I G+ ++ +E L FK MLV
Sbjct: 183 NTVLNGYASNGDVMACERLFEEMPER----NVFSWNALIGGYTRNGCFSEVLSAFKRMLV 238
Query: 278 SG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
G + PN+ T+ VL A G++ +G+ +H G +V+ +AL+DMY+KCG ++
Sbjct: 239 DGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVE 298
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
A +F+ K++ SWN +IG HG ++ LF M G + +T I +L AC+
Sbjct: 299 TALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACT 358
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
H GLVE G F+SM + Y + EHY C+VD+L R+G + A D +R++P+ +
Sbjct: 359 HMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIW 418
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
A C ++ +LA E+ E + P +VMLSNI G W + L+ M++
Sbjct: 419 AALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDT 478
Query: 517 NVQKQPGFSRVEKRNEFVE 535
+K PG S +E + VE
Sbjct: 479 GFKKLPGCSLIEVNDYLVE 497
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 3/237 (1%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS-L 103
++ S + L G YA GDV + +F+++P NVF N ++ G F E + F +
Sbjct: 178 DVMSWNTVLNG-YASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRM 236
Query: 104 MREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
+ + N T VL AC L + GK VH A G++ +V V NAL+DMY+KCG+
Sbjct: 237 LVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGV 296
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
+ +A VF M +D++SW ++I G +A+ LF MK+ G P+ T+ I+ +
Sbjct: 297 VETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCA 356
Query: 224 YARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
G F++F MT + VP + + ++ ++ A+ + M +
Sbjct: 357 CTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEA 413
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 164/437 (37%), Gaps = 127/437 (29%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAG----------------- 59
+L C+K AL++G++VH + + N F + + L+ +YA
Sbjct: 57 ILKSCVKINALKEGEEVHCFVIKSGFRANPF-VATTLIDMYASGGAIHAAYRVFGEMIER 115
Query: 60 --------------CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMR 105
C D+ +AR +FD P ++ + N M+
Sbjct: 116 NVIAWTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMIS------------------- 156
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
G ++ K + + +M DV N +++ Y+ G +
Sbjct: 157 -------------------GYIEAKDVIRARELFDKMP-NKDVMSWNTVLNGYASNGDVM 196
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG-LEPNQFTY------- 217
+ R+F M ER+V SW ++I GY E + F+RM ++G + PN T
Sbjct: 197 ACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSAC 256
Query: 218 ----------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDL 249
NA++ YA+ G A F M + DL
Sbjct: 257 ARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNK----DL 312
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG------ 303
++WN +I G A +AL LF M ++G P+ +T G+L A G ++ G
Sbjct: 313 ISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDGFSYFKS 372
Query: 304 -REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK-NVASWNAMIGCYG 361
+ +++V R+ + ++D+ + G L A I+ + W A++G
Sbjct: 373 MTDDYSIVPRIEHY------GCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGACR 426
Query: 362 KHGMVDSSIELFERMLE 378
+ V+ + E+++E
Sbjct: 427 VYKNVELAELALEKLIE 443
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 278/557 (49%), Gaps = 45/557 (8%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGD 62
R I +N S N LL S +L + + + D +++ ++ +A G
Sbjct: 93 RAIPRPDNYSYN---TLLHALAVSSSLADARGLFDEMPVRDSVTYNV---MISSHANHGL 146
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
V+ AR FD P + N M+ A G +EA G F+ E+ + +++ ++
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEW----DAISWNALMSG 202
Query: 123 CVG---------LLDIKKGKQV--------------HAVATQMGFE----NDVSVGNALI 155
V L D G+ V V + F+ DV A++
Sbjct: 203 YVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVV 262
Query: 156 DMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQF 215
Y++ G+L ARRVF M ER+ VSW +M++ Y +DEA LF M N
Sbjct: 263 SGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVA 318
Query: 216 TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
++N ++ YA+ G A A F M + D V+W AM++ ++Q E L+LF M
Sbjct: 319 SWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
G N VL +++ G ++H + R G + F G+AL+ MY KCG++
Sbjct: 375 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNM 434
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+DAR FE ++V SWN MI Y +HG ++E+F+ M + +++TL+ VL+AC
Sbjct: 435 EDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAAC 494
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH GLVEKG+ F SM +GV EHY C++D+L R+GR+ EA+DL++ +P ++M
Sbjct: 495 SHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTM 554
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
GA IH +L + E+ FE+ +V+LSNI A+ G+W +A +R +M+E
Sbjct: 555 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEE 614
Query: 516 KNVQKQPGFSRVEKRNE 532
+ V+K PGFS +E +N+
Sbjct: 615 RGVKKVPGFSWIEVQNK 631
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 173/371 (46%), Gaps = 25/371 (6%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
S + ++ Y+ G + A +F IP P+ + N ++ A A + + +A G F M
Sbjct: 70 STYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMP-- 127
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
+ + I A GL+ + + + E D N ++ Y + G + A
Sbjct: 128 VRDSVTYNVMISSHANHGLVSLARHY------FDLAPEKDAVSWNGMLAAYVRNGRVEEA 181
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR 227
R +F+ E D +SW +++SGY K+ EA LF+RM + ++N +++ YARR
Sbjct: 182 RGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDV----VSWNIMVSGYARR 237
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
GD A F V D+ TW A++SG+AQ+ EA ++F M N V
Sbjct: 238 GDMVEARRLFDAAP----VRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMV 293
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
+Q + + ++ + + CR +V + + ++ Y++ G L++A+ +F+
Sbjct: 294 AAYIQRRMMDEAKEL---FNMMPCR-----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQ 345
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
K+ SW AM+ Y + G + +++LF M G N VLS C+ +E G+++
Sbjct: 346 KDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQL 405
Query: 408 F-RSMKERYGV 417
R ++ YGV
Sbjct: 406 HGRLIRAGYGV 416
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 153/366 (41%), Gaps = 90/366 (24%)
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
E +V N I + + G + A R+F M R ++ +M++GY ++ A LF
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 204 RMK----------LEGLE---------------P--NQFTYNAIIASYARRGDSNAAFAF 236
+ L L P + TYN +I+S+A G + A +
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 237 FSRMTAEGFVP---------------------------DLVTWNAMISGFAQSKRENEAL 269
F + V D ++WNA++SG+ Q + +EA
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEAR 213
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
+LF M + N+ V+G + G + ++ R A R DVFT +A++ Y
Sbjct: 214 ELFDRMPGRDVVSWNIMVSGYARRGDM---VEARRLFDAAPVR-----DVFTWTAVVSGY 265
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER-------------- 375
++ G L++AR +F+ +N SWNAM+ Y + M+D + ELF
Sbjct: 266 AQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLT 325
Query: 376 ------MLEEGM-------RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
MLEE + + V+ ++L+A S GG E+ L++F M R G +++
Sbjct: 326 GYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMG-RCGEWVNRS 384
Query: 423 HYACVV 428
+ACV+
Sbjct: 385 AFACVL 390
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 273/545 (50%), Gaps = 34/545 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL C K+ AL Q Q + N + + +V + G + AR +FD P+P V
Sbjct: 73 LLRSC-KTVALLQKVQAQIITHGFQYNGY-VAPNVVTSWVGLKQMAHARHLFDHFPDPKV 130
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
+ N + ++E + F M+ R N FTF +VLK+C + +G+++H
Sbjct: 131 ELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCE 190
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV--- 195
+ G E + V LID+YS + SA ++F GM ER++V+WTSMISGY ++V
Sbjct: 191 VIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALA 250
Query: 196 --------DEAVVLFERM--------------KLEGLEP--NQFTYNAIIASYARRGDSN 231
+ VVL+ M KL P + ++N ++ YA GD
Sbjct: 251 RRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVE 310
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGV 290
A F M ++ +WN +I G+A + E L+ FK ML+ G + PN+ T+ V
Sbjct: 311 ACEQLFEEMPER----NVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTV 366
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A G++ +G+ +H +G ++ G+ALIDMYSKCG +++A +FE +K++
Sbjct: 367 LSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDL 426
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+WN+MI HG ++ LF +M G + + +T I VL +C+H GLVE+G F S
Sbjct: 427 ITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNS 486
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M Y + EHY C+VD+ R+G + A + ++++PM + A C I+ D
Sbjct: 487 MVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNID 546
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
LA ++ + + P +V+LSNI G W + L+ +M++ +K PG S +E
Sbjct: 547 LAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVN 606
Query: 531 NEFVE 535
+ VE
Sbjct: 607 DSVVE 611
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 164/480 (34%), Positives = 253/480 (52%), Gaps = 55/480 (11%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIG-YFSLMREFIYRC-------NKFTFSIVL 120
VF +IP PN+ + N M+ A A ++A+ Y ++R + ++FT+ +L
Sbjct: 64 VFAQIPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLL 123
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
KAC L + G+QVHA + G E+ V N+LI+MY++CG L +AR+ F GM E+DVV
Sbjct: 124 KACGALAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVV 183
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
SW N +I+++AR G A F M
Sbjct: 184 SW-----------------------------------NTLISAHARMGQMRRARELFYSM 208
Query: 241 TAEGFVPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
PD +V+W A++SG+ A+++F+ M + G +P++V++ VL A G
Sbjct: 209 ------PDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDDVSIVAVLPACAQLG 262
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++++GR I+A + G+ V+ +AL++MY+KCG +++A LF K+V SW+ IG
Sbjct: 263 ALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQLFHGMSEKDVISWSTAIG 322
Query: 359 CYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
HG ++ LFE M EG + N +T + +LSACSH GLV++GL MKE YGV
Sbjct: 323 GLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAGLVDEGLRYLDQMKEDYGV 382
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
+ EHY CVVD+L RSGR+ A D +R +P+ + G+ + C HG + AV E
Sbjct: 383 EPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGSLLSACRSHGDVETAVVAAE 442
Query: 478 EFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFV 534
E+ VML+N+ A G W E + RK ++ ++ +K PG S +E N EFV
Sbjct: 443 RLVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIRSRSTRKTPGCSMIEVDNVVREFV 502
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 142/294 (48%), Gaps = 34/294 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPN-- 75
LL C A R G+QVHA + + ++ ++ L+ +Y CGD+++AR FD +
Sbjct: 122 LLKACGALAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKD 181
Query: 76 ---------------------------PNVFMLNWMVMASAFT--GNFQEAIGYFSLMRE 106
P+ +++W + S +T G+F A+ F LM+
Sbjct: 182 VVSWNTLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQM 241
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
+ + + VL AC L ++ G+ ++A ++ G V + NAL++MY+KCG +
Sbjct: 242 EGFEPDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEE 301
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG-LEPNQFTYNAIIASYA 225
A ++FHGM E+DV+SW++ I G + EAV LFE M EG + PN T+ ++++ +
Sbjct: 302 ALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACS 361
Query: 226 RRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
G + + +M + G P + + ++ +S R AL +GM V
Sbjct: 362 HAGLVDEGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVP 415
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/503 (33%), Positives = 257/503 (51%), Gaps = 31/503 (6%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF-IYRC 111
++ +A G V+ AR FD P + N M+ A G +EA G F+ E+ +
Sbjct: 12 MISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISW 71
Query: 112 NKFTFSIV----LKACVGLLDIKKGKQV--------------HAVATQMGFE----NDVS 149
N V + L D G+ V V + F+ DV
Sbjct: 72 NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 131
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
A++ Y++ G+L ARRVF M ER+ VSW +M++ Y +DEA LF M
Sbjct: 132 TWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR- 190
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
N ++N ++ YA+ G A A F M + D V+W AM++ ++Q E L
Sbjct: 191 ---NVASWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCSEETL 243
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
+LF M G N VL +++ G ++H + R G + F G+AL+ MY
Sbjct: 244 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMY 303
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
KCG+++DAR FE ++V SWN MI Y +HG ++E+F+ M + +++TL+
Sbjct: 304 FKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 363
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
VL+ACSH GLVEKG+ F SM +GV EHY C++D+L R+GR+ EA+DL++ +P
Sbjct: 364 GVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 423
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENL 509
++M GA IH +L + E+ FE+ +V+LSNI A+ G+W +A +
Sbjct: 424 EPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 483
Query: 510 RKIMKEKNVQKQPGFSRVEKRNE 532
R +M+E+ V+K PGFS +E +N+
Sbjct: 484 RVMMEERGVKKVPGFSWIEVQNK 506
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 142/282 (50%), Gaps = 21/282 (7%)
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D N +I ++ GL+ AR F E+D VSW M++ Y +V+EA LF
Sbjct: 5 DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT 64
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
E + ++NA+++ Y + G + A F RM D+V+WN M+SG+A+
Sbjct: 65 ----EWDVISWNALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMV 116
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
EA +LF V + V+G Q G L + R A+ R + + +A++
Sbjct: 117 EARRLFDAAPVRDVFTWTAVVSGYAQNGMLE---EARRVFDAMPER-----NAVSWNAMV 168
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
Y + + +A+ LF + +NVASWN M+ Y + GM++ + +F+ M ++ + V
Sbjct: 169 AAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAV 224
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
+ ++L+A S GG E+ L++F M R G +++ +ACV+
Sbjct: 225 SWAAMLAAYSQGGCSEETLQLFIEMG-RCGEWVNRSAFACVL 265
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 3/172 (1%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C AL G Q+H L + + + L+ +Y CG++ AR F+++
Sbjct: 263 CVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEER 322
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQV 135
+V N M+ A G +EA+ F +MR + + T VL AC ++KG
Sbjct: 323 DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYF 382
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMI 186
+++ G +ID+ + G L A + M FE D W +++
Sbjct: 383 YSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 434
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
D T + +I ++ G + AR F++ K+ SWN M+ Y ++G V+ + LF
Sbjct: 5 DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT 64
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
E + ++ +++S G + + E+F M R V + +V R G M
Sbjct: 65 EWDV----ISWNALMSGYVQWGKMSEARELFDRMPGRDVVS-----WNIMVSGYARRGDM 115
Query: 438 VEAYDLLRQVPM----YVTNSMAGAFRNGCNIHGRR 469
VEA L P+ T ++G +NG RR
Sbjct: 116 VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARR 151
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/569 (29%), Positives = 285/569 (50%), Gaps = 64/569 (11%)
Query: 26 SKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYA-GCGDVNSARLVFDKIPNPNVFMLNW 83
S +L K++HA L ++I S S+++ YA + A VF++I P + + N
Sbjct: 24 STSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNH 83
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
M+ + + +AI +++ M + + TF + K+C + D+++G+ V + ++G
Sbjct: 84 MIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKLG 143
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
FE+ + V NALI MY G L A++VF GM ERDVVSW S+I GY ++ + + LF
Sbjct: 144 FESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFR 203
Query: 204 RMKLEGLEPNQFTY-----------------------------------NAIIASYARRG 228
M+ + + T N +I Y RRG
Sbjct: 204 EMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRG 263
Query: 229 DSNAAFAFFSRMTAEGFVP---------------------------DLVTWNAMISGFAQ 261
+ A F +M + V D+++W +MI G++
Sbjct: 264 MIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSL 323
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
+K+ EA+KLF+ M+VS +KP+ +TV L A GS+ G +H + + + DVF
Sbjct: 324 AKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFV 383
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
G++LIDMY KCG ++ A +F + ++ SW ++I +G +S++ +F++ML+EG+
Sbjct: 384 GNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGI 443
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
T + VL AC+H GLV+KG+E F+SM+ Y + +HY CVVD+LCRSG + AY
Sbjct: 444 CPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAY 503
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
+ ++++P+ + + C +HG LA + ++ + +V+ S+ A
Sbjct: 504 NFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSD 563
Query: 502 EWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
W + +RK+M+ N+QK +S +E R
Sbjct: 564 RWDDVIKIRKLMEVTNLQKPCAYSSIEVR 592
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/503 (32%), Positives = 266/503 (52%), Gaps = 41/503 (8%)
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLK 121
D+ L+FD++ P +F+ N +V + + + Q + +S +R ++ TF ++LK
Sbjct: 53 DLGYTLLLFDRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLK 112
Query: 122 ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS 181
A L + + Q +A + G + D V N+L+ ++ CG + +RR+F ++DVVS
Sbjct: 113 AFSKLRN-ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVS 171
Query: 182 WTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------ 217
WT++I+G + EA+ F M+ G+E ++ T
Sbjct: 172 WTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYV 231
Query: 218 ------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
+A++ Y++ G + A F+ M +LV+W A+I+G+ Q R
Sbjct: 232 ESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTR----NLVSWGALIAGYVQCNRY 287
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EALK+F+ M++ GI+PN TVT L A GS+ GR +H V R L ++ G+AL
Sbjct: 288 KEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTAL 347
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
+DMYSKCG + +A +FE K+V W AMI G SS+ LF +M+ ++ N
Sbjct: 348 VDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNG 407
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
VT + VLSAC+HGGLV++GLE+FR M Y ++ + +HY C+VD+L R+GR+ EA +
Sbjct: 408 VTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIE 467
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
+PM T + GA +GC IH +L +G ++ +++L+N+ + +W
Sbjct: 468 SMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEA 527
Query: 506 AENLRKIMKEKNVQKQPGFSRVE 528
A N+R++MK K V K P S +E
Sbjct: 528 AANVRRLMKGKGVDKSPACSWIE 550
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 172/373 (46%), Gaps = 49/373 (13%)
Query: 43 DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS 102
D + F +++ LV +A CG V+ +R +F + +V ++ G EA+ F
Sbjct: 135 DFDAF-VQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFV 193
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG-FENDVSVGNALIDMYSKC 161
MR ++ T VL A L D+ G+ VH + G DV VG+AL+DMYSKC
Sbjct: 194 EMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKC 253
Query: 162 GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---- 217
G A +VF+ M R++VSW ++I+GY ++ EA+ +F+ M +EG+EPNQ T
Sbjct: 254 GYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSAL 313
Query: 218 -------------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFV 246
A++ Y++ G + A F ++ A+
Sbjct: 314 TACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAK--- 370
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
D+ W AMI+G A +L LF M+ S ++PN VT GVL A G + G E+
Sbjct: 371 -DVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLEL 429
Query: 307 HAL-VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS-WNAMI-GCYGKH 363
L +C L +V ++D+ + G L++A E ++ W A+ GC
Sbjct: 430 FRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGC---- 485
Query: 364 GMVDSSIELFERM 376
M+ + EL E +
Sbjct: 486 -MIHKAFELGEHI 497
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 130/321 (40%), Gaps = 80/321 (24%)
Query: 149 SVGNALIDMYSKCG----------LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
++ ++++ + KCG +L ++ H F D++ + GY
Sbjct: 6 TLRHSILCCFHKCGTFDHLNQTTSILITSGLAHHTFFLSDLLRSATKDLGY--------T 57
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
++LF+R+ P F +N I+ S++ +SR+ G +PD T+ ++
Sbjct: 58 LLLFDRLA----TPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKA 113
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
F++ + EN + +A + + GL D
Sbjct: 114 FSKLRNENPF------------------------------------QFYAHIVKFGLDFD 137
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
F ++L+ ++ CG + +R LF T K+V SW A+I ++G ++E F M
Sbjct: 138 AFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRS 197
Query: 379 EGMRANEVTLISVLSACS-----------HGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
G+ +EVT++SVL A + HG VE G I + V + + +
Sbjct: 198 SGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVI-------WDVYVG----SAL 246
Query: 428 VDMLCRSGRMVEAYDLLRQVP 448
VDM + G +A + ++P
Sbjct: 247 VDMYSKCGYCDDAVKVFNEMP 267
>gi|356571125|ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g05240-like [Glycine max]
Length = 552
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 178/561 (31%), Positives = 274/561 (48%), Gaps = 64/561 (11%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
N + LL +C K++R+ K++ L+ + ++ F + S GD+N+A LVF +I
Sbjct: 5 NTILSLLARC---KSMRELKKLRGLILSKLID-FCVDSXF-------GDINNADLVFRQI 53
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI---YRCNKFTFSIVLKACVGLLDIK 130
P+V++ W M F N + L R+ I Y + FTF VLKAC + D
Sbjct: 54 DAPSVYI--WNSMIRGFVNNHNPRMSML-LYRQLIENGYSPDHFTFPFVLKACCAIADQD 110
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
GK +H + GFE D L+ MY C + S +VF + +VV+WT +I+GY
Sbjct: 111 CGKCIHCCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTCLIAGYV 170
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
N ++ EA+ +F+ M G+EPN+ T
Sbjct: 171 NNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIRKAGYDPFMS 230
Query: 218 ---------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
AI+ YA+ G A F++M ++V+WN+MI+ + Q +R EA
Sbjct: 231 TSNSNIILATAILEMYAKCGSFKIARDLFNKMPQR----NIVSWNSMINAYNQYERHKEA 286
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L LF M SGI P+ T VL ++ +G+ +HA + + G+ D+ +AL+DM
Sbjct: 287 LDLFFDMWTSGIYPDKATFLSVLSVCAHLCALALGQTVHAYLXKTGIGTDISLATALLDM 346
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVT 387
Y+K G L A+ +F + ++V W +MI HG + ++ +F+ M E+ + + +T
Sbjct: 347 YAKTGGLGSAQKIFSSLQKRDVVMWTSMINGLAMHGDGNEALGMFQTMHEDSSLVPDHIT 406
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
I VL ACSH GLVE+ + FR M E Y + +EHY C+VD+L RSG EA L+ +
Sbjct: 407 YIGVLFACSHVGLVEEAKKHFRLMTEMYSIVPGREHYGCMVDLLSRSGHFGEAERLMETM 466
Query: 448 PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAE 507
+ S+ GA GC IH +A + E E+ + V+LSNI A G W +
Sbjct: 467 AIQPNISIXGALLYGCQIHENLXVANQVKERLTELESCQSGAHVLLSNIYAKAGRWEDVN 526
Query: 508 NLRKIMKEKNVQKQPGFSRVE 528
RK+MK K + K G S VE
Sbjct: 527 GTRKVMKHKRITKIIGHSSVE 547
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 289/570 (50%), Gaps = 53/570 (9%)
Query: 20 LGKCMKSKALRQ----GKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
LG ++S A+ + G Q+ +L + L N+F+ S L+ VYA CG V AR VFD +
Sbjct: 96 LGSALRSAAVARRPAIGAQLQSLALKSGLANNVFA-ASALLDVYAKCGRVRDARQVFDGM 154
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG----LLDI 129
P N N ++ +G+ A+ F M ++ TF+ +L A G L+
Sbjct: 155 PERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLM-- 212
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE-RDVVSWTSMISG 188
Q+H + G ++V NA I YS+CG L +RR+F G+ + RD++SW +M+
Sbjct: 213 ---HQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGA 269
Query: 189 YCNVSKVDEAVVLFERMKLE-GLEPNQFTYNAIIASYARRGDS----------------- 230
Y + DEA+ F RM E G+ P+ +++ +II+S + G
Sbjct: 270 YTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALE 329
Query: 231 ------NAAFAFFSR-----MTAEGF-------VPDLVTWNAMISGFAQSKRENEALKLF 272
NA A ++R M + + + D V+WN+M++G++Q +ALK F
Sbjct: 330 GVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFF 389
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
+ M ++ + + L++ +Q+G++IH LV G + F S+LI MYSK
Sbjct: 390 RCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKS 449
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G + DAR FE + WNAMI Y +HG ++ LF ML+ + +T + ++
Sbjct: 450 GIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLI 509
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
++CSH GLV++G EI +M+ +YGV + EHYAC VD+ R+G++ +A L+ +P
Sbjct: 510 TSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPD 569
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
+ C IHG +LA + F R+ +V+LS++ + G W + ++++
Sbjct: 570 AMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRV 629
Query: 513 MKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
MK++ + K PG+S +E +NE +++S
Sbjct: 630 MKKRGLSKVPGWSWIEVKNEVHSFNAEDKS 659
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 181/382 (47%), Gaps = 42/382 (10%)
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
+AR VFD++P + N ++ A A +G EA M N F L++
Sbjct: 45 AARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAA 104
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
G Q+ ++A + G N+V +AL+D+Y+KCG + AR+VF GM ER+ VSW +
Sbjct: 105 VARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNA 164
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------- 217
+I+GY + A+ LF M+ EGL P++ T+
Sbjct: 165 LIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGS 224
Query: 218 -------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
NA I +Y++ G + F + G + DL++WNAM+ + + ++EA+K
Sbjct: 225 ALGLTVLNAAITAYSQCGSLKDSRRIFDGI---GDIRDLISWNAMLGAYTHNGMDDEAMK 281
Query: 271 LFKGMLV-SGIKPNNVTVTGVLQAGGLTG-SIQIGREIHALVCRMGLHIDVFTGSALIDM 328
F M+ SG+ P+ + T ++ + G GR IH LV + L +ALI M
Sbjct: 282 FFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAM 341
Query: 329 YSKCGS---LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
Y++ ++DA F +K+ SWN+M+ Y +HG+ +++ F M E +R +E
Sbjct: 342 YTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDE 401
Query: 386 VTLISVLSACSHGGLVEKGLEI 407
+ L + S +++ G +I
Sbjct: 402 YAFSAALRSSSELAVLQLGKQI 423
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 147/298 (49%), Gaps = 44/298 (14%)
Query: 152 NALIDMYSKCGL--LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
N L+ YS+ L +ARRVF + RD VSW ++++ EA L M +G
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 210 LEPNQFTYNAII--ASYARR--------------GDSNAAFAFF--------------SR 239
L N F + + A+ ARR G +N FA +R
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 240 MTAEGFVP-DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
+G + V+WNA+I+G+ +S AL+LF M G+ P+ T +L A + G
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTA--VEG 206
Query: 299 -SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE-ITRIKNVASWNAM 356
S + ++H + + G + + +A I YS+CGSLKD+R +F+ I I+++ SWNAM
Sbjct: 207 PSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAM 266
Query: 357 IGCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACS------HGGLVEKGLEI 407
+G Y +GM D +++ F RM++E G+ + + S++S+CS H G V GL I
Sbjct: 267 LGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVI 324
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
+N ++ +Y+R A A R+ E D V+WNA+++ A S EA +L + M
Sbjct: 28 WNQLLTAYSRSSPDGLAAA--RRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMH 85
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
G+ N + L++ + IG ++ +L + GL +VF SAL+D+Y+KCG ++
Sbjct: 86 AQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVR 145
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
DAR +F+ +N SWNA+I Y + G + S++ELF M EG+ +E T S+L+A
Sbjct: 146 DARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVE 205
Query: 397 ----------HGGLVEKG 404
HG +V+ G
Sbjct: 206 GPSCFLMHQLHGKIVKYG 223
>gi|242067895|ref|XP_002449224.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
gi|241935067|gb|EES08212.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
Length = 570
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 172/510 (33%), Positives = 257/510 (50%), Gaps = 51/510 (10%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQ--------EAIGYFSLMREFIYRCNKFTFS 117
AR VFD P + +M N ++ A A + + +A+ + MR + +T+
Sbjct: 66 ARRVFDAAPVRDAYMWNTLLRAHAHSHSHSQSSHSHAVDALALYKRMRAAGVAPDHYTYP 125
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF---HGM 174
IVL AC + G+ VH A + + D V LI MY + G + A VF HG
Sbjct: 126 IVLPACAAARQPRLGRAVHGDAVRFALDGDGFVRCTLIAMYFQEGEVADAELVFAESHGS 185
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------- 217
R VVSWT+M++GY EA+ LF M EG+ PN+ T
Sbjct: 186 -SRTVVSWTAMVAGYVQNYFFGEALALFSTMVAEGVLPNEITLISFLPCLQGQEWLDAGE 244
Query: 218 ------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
NA+IA Y + G A A F M V LV+WN M++ +
Sbjct: 245 MVHGFVIRSGFDANIPLANALIAMYGKCGSIPMAEALFEGMA----VRSLVSWNTMVAIY 300
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
Q EA+K F ML + + VT+ VL A G +G+++ G+ +H GL D
Sbjct: 301 EQHGDVVEAIKFFHRMLTEKVGFDCVTLVSVLSACGRSGALETGKWVHEFARSHGLDADA 360
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
G+ L+DMY+KCG + DAR +F+ ++ V SW+AMI Y HG + +++LF M E
Sbjct: 361 RIGNVLVDMYAKCGEIADARKVFDCLHVRGVVSWSAMISAYANHGDSEEALKLFCLMKSE 420
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G+R N T +VL AC H GLV +GL+ F S+ Y + + EHYAC+VDML R+GR+VE
Sbjct: 421 GVRPNSFTFTAVLVACGHSGLVNEGLKHFNSILSDYQMSPTLEHYACIVDMLGRAGRLVE 480
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
AY+++R + + + GAF GC +H +LA + ++ F+ G +V++SN+
Sbjct: 481 AYEIIRGMSLCPDKCVWGAFLGGCKLHSNLELAEFVAKDLFQSGSNDVTFYVLMSNMYFE 540
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEK 529
G +AE +R+ MKE ++K G S V +
Sbjct: 541 AGMLEDAERIRRAMKEMELKKTAGHSAVNQ 570
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 182/408 (44%), Gaps = 51/408 (12%)
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+HA A +G +++ +LI + L ARRVF RD W +++ + +
Sbjct: 35 IHARAIVLGVSANLAFATSLIAGAAPASL-AYARRVFDAAPVRDAYMWNTLLRAHAHSHS 93
Query: 195 VD--------EAVVLFERMKLEGLEPNQFTYNAIIAS-------------------YARR 227
+A+ L++RM+ G+ P+ +TY ++ + +A
Sbjct: 94 HSQSSHSHAVDALALYKRMRAAGVAPDHYTYPIVLPACAAARQPRLGRAVHGDAVRFALD 153
Query: 228 GDSNAAFAFFSRMTAEGFVPD--------------LVTWNAMISGFAQSKRENEALKLFK 273
GD + EG V D +V+W AM++G+ Q+ EAL LF
Sbjct: 154 GDGFVRCTLIAMYFQEGEVADAELVFAESHGSSRTVVSWTAMVAGYVQNYFFGEALALFS 213
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
M+ G+ PN +T+ L + G +H V R G ++ +ALI MY KCG
Sbjct: 214 TMVAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRSGFDANIPLANALIAMYGKCG 273
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
S+ A LFE ++++ SWN M+ Y +HG V +I+ F RML E + + VTL+SVLS
Sbjct: 274 SIPMAEALFEGMAVRSLVSWNTMVAIYEQHGDVVEAIKFFHRMLTEKVGFDCVTLVSVLS 333
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMY 450
AC G +E G + +G+ +VDM + G + +A +D L +
Sbjct: 334 ACGRSGALETG-KWVHEFARSHGLDADARIGNVLVDMYAKCGEIADARKVFDCLHVRGVV 392
Query: 451 VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
++M A+ N HG + A+ + G+R P+ F + + A
Sbjct: 393 SWSAMISAYAN----HGDSEEALKLFCLMKSEGVR-PNSFTFTAVLVA 435
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 201/442 (45%), Gaps = 59/442 (13%)
Query: 19 LLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C ++ R G+ VH A+ D + F ++ L+ +Y G+V A LVF +
Sbjct: 127 VLPACAAARQPRLGRAVHGDAVRFALDGDGF-VRCTLIAMYFQEGEVADAELVFAESHGS 185
Query: 77 NVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ +++W M + + N F EA+ FS M N+ T L G + G+
Sbjct: 186 SRTVVSWTAMVAGYVQNYFFGEALALFSTMVAEGVLPNEITLISFLPCLQGQEWLDAGEM 245
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + GF+ ++ + NALI MY KCG + A +F GM R +VSW +M++ Y
Sbjct: 246 VHGFVIRSGFDANIPLANALIAMYGKCGSIPMAEALFEGMAVRSLVSWNTMVAIYEQHGD 305
Query: 195 VDEAVVLFERMKLE-----------------------------------GLEPNQFTYNA 219
V EA+ F RM E GL+ + N
Sbjct: 306 VVEAIKFFHRMLTEKVGFDCVTLVSVLSACGRSGALETGKWVHEFARSHGLDADARIGNV 365
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ YA+ G+ A F + G +V+W+AMIS +A EALKLF M G
Sbjct: 366 LVDMYAKCGEIADARKVFDCLHVRG----VVSWSAMISAYANHGDSEEALKLFCLMKSEG 421
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
++PN+ T T VL A G +G + G + ++++ + + + ++DM + G L +A
Sbjct: 422 VRPNSFTFTAVLVACGHSGLVNEGLKHFNSILSDYQMSPTLEHYACIVDMLGRAGRLVEA 481
Query: 339 RTLFEITRIKNVAS----WNAMIGCYGKHGMVDSSIELFERMLEEGMR--ANEVTLISVL 392
+EI R ++ W A +G H S++EL E + ++ + +N+VT ++
Sbjct: 482 ---YEIIRGMSLCPDKCVWGAFLGGCKLH----SNLELAEFVAKDLFQSGSNDVTFYVLM 534
Query: 393 SACS-HGGLVEKGLEIFRSMKE 413
S G++E I R+MKE
Sbjct: 535 SNMYFEAGMLEDAERIRRAMKE 556
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 164/340 (48%), Gaps = 12/340 (3%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGD 62
+ P +++L CL G+ + L G+ VH + + D NI L + L+ +Y CG
Sbjct: 220 VLPNEITLISFLPCLQGQ----EWLDAGEMVHGFVIRSGFDANI-PLANALIAMYGKCGS 274
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
+ A +F+ + ++ N MV G+ EAI +F M + T VL A
Sbjct: 275 IPMAEALFEGMAVRSLVSWNTMVAIYEQHGDVVEAIKFFHRMLTEKVGFDCVTLVSVLSA 334
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C ++ GK VH A G + D +GN L+DMY+KCG + AR+VF + R VVSW
Sbjct: 335 CGRSGALETGKWVHEFARSHGLDADARIGNVLVDMYAKCGEIADARKVFDCLHVRGVVSW 394
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA 242
++MIS Y N +EA+ LF MK EG+ PN FT+ A++ + G N F+ + +
Sbjct: 395 SAMISAYANHGDSEEALKLFCLMKSEGVRPNSFTFTAVLVACGHSGLVNEGLKHFNSILS 454
Query: 243 E-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
+ P L + ++ ++ R EA ++ +GM + P+ L L +++
Sbjct: 455 DYQMSPTLEHYACIVDMLGRAGRLVEAYEIIRGM---SLCPDKCVWGAFLGGCKLHSNLE 511
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+ + + + G + DV + +MY + G L+DA +
Sbjct: 512 LAEFVAKDLFQSGSN-DVTFYVLMSNMYFEAGMLEDAERI 550
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 282/546 (51%), Gaps = 58/546 (10%)
Query: 32 GKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
+QVH L + T ++ + S LV Y G V AR +FD++P N +++W M S +
Sbjct: 131 ARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERN--LVSWTTMISGY 188
Query: 91 TGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
+EA+G F LMR N+F F+ VL A V + GKQVH V + G V
Sbjct: 189 ASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFV 248
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
SV NAL+ MY+KCG L + +F +++ ++W+++I+GY +A+ LF +M
Sbjct: 249 SVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYA 308
Query: 209 GLEPNQFTY-----------------------------------NAIIASYAR---RGDS 230
G P++FT A++ YA+ GD+
Sbjct: 309 GFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDA 368
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
F F PDLV W ++I+G+ Q+ + EAL ++ M + I PN +T+ V
Sbjct: 369 RKGFDFL-------LEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASV 421
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L+A +++ G++IHA + GL ++ SAL MY+KCGSL++ +F +++
Sbjct: 422 LKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDI 481
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SWNAMI ++G ++ELFE M EG + + +T ++VLSACSH G+V++G F
Sbjct: 482 VSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNM 541
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV----PMYVTNSMAGAFRNGCNIH 466
M + + + EHYAC+VD+L R+G++ EA + + M + + A RN CN
Sbjct: 542 MFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNY- 600
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
+L GE+ E+G R+ +V+LS+I A G + +R++MK + V+K+ G S
Sbjct: 601 ---ELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSW 657
Query: 527 VEKRNE 532
+E ++
Sbjct: 658 IELKSH 663
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 154/542 (28%), Positives = 264/542 (48%), Gaps = 73/542 (13%)
Query: 10 NLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSAR 67
NL + Y D K+L++G+ +HA + + L + L+ YA CG ++ A+
Sbjct: 12 NLLIQYAD--------QKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAK 63
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR---CNKFTFSIVLKACV 124
LVF+ + + NV N ++ + G+ + + L R I + TF V A
Sbjct: 64 LVFENLKHKNVVSYNCLIHGLSHNGS-KGSNFVLELFRRMIANNILPDAHTFPGVFTAAA 122
Query: 125 GLLDIK-KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
L +QVH + + +DV VG++L++ Y K G + AR++F M ER++VSWT
Sbjct: 123 LNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWT 182
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------- 217
+MISGY + EA+ +F M+L N+F +
Sbjct: 183 TMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKN 242
Query: 218 ---------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
NA++ YA+ G+ N + F + + + +TW+A+I+G++Q+ ++A
Sbjct: 243 GVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDK----NAITWSALITGYSQAGDSHKA 298
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
LKLF M +G P+ T+ GVL+A +I+ G++ H + + G ++T +AL+DM
Sbjct: 299 LKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDM 358
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y+K G DAR F+ ++ W ++I Y ++G + ++ ++ RM + NE+T+
Sbjct: 359 YAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTM 418
Query: 389 ISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR-- 445
SVL ACS+ +E+G +I R++K G ++S + + M + G + E + R
Sbjct: 419 ASVLKACSNLAALEQGKQIHARTIKYGLGPELSIR--SALSTMYAKCGSLEEGVLIFRRM 476
Query: 446 -QVPMYVTNSM-AGAFRNGCNIHGRRDLAVTMGEEFFEMGLR--KPD--GFVMLSNICAA 499
Q + N+M +G +NG HGR L E F EM L KPD FV + + C+
Sbjct: 477 LQRDIVSWNAMISGLSQNG---HGREAL-----ELFEEMRLEGTKPDHITFVTVLSACSH 528
Query: 500 DG 501
G
Sbjct: 529 MG 530
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCG 61
R I P N L+ + +L C AL QGKQ+HA L S++S L +YA CG
Sbjct: 409 RKILP-NELT---MASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCG 464
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLK 121
+ L+F ++ ++ N M+ + G+ +EA+ F MR + + TF VL
Sbjct: 465 SLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLS 524
Query: 122 ACVGLLDIKKG 132
AC + +K+G
Sbjct: 525 ACSHMGIVKRG 535
>gi|15231917|ref|NP_188091.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274207|sp|Q9LUC2.1|PP231_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14730
gi|9294394|dbj|BAB02404.1| unnamed protein product [Arabidopsis thaliana]
gi|332642039|gb|AEE75560.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 653
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/550 (30%), Positives = 290/550 (52%), Gaps = 40/550 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLK--SKLVGVYAGCGDVNSARLVFDKIPNPN 77
L +C + K G+Q+H + S + + LV +YA CG + A LVF +
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERD 125
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
VF N ++ G+ +A+ + MR +K+TF +LK +++ K+VH
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGS-DAMELSDVKKVHG 184
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD-VVSWTSMISGYCNVSKVD 196
+A ++GF++D VG+ L+ YSK + A++VF + +RD V W ++++GY + + +
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFE 244
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
+A+++F +M+ EG+ ++ T ++++++ GD + + G D+V NA+I
Sbjct: 245 DALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALI 304
Query: 257 SGFAQSKRENEA-------------------------------LKLFKGMLVSGIKPNNV 285
+ +SK EA L LF+ ML SGI+P+ V
Sbjct: 305 DMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIV 364
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGL----HIDVFTGSALIDMYSKCGSLKDARTL 341
T+T VL G S++ GREIH + GL + F ++L+DMY KCG L+DAR +
Sbjct: 365 TLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMV 424
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ R+K+ ASWN MI YG + ++++F M G++ +E+T + +L ACSH G +
Sbjct: 425 FDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFL 484
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
+G M+ Y + + +HYACV+DML R+ ++ EAY+L P+ + + +
Sbjct: 485 NEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILS 544
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C +HG +DLA+ G+ E+ G+V++SN+ G++ E ++R M+++NV+K
Sbjct: 545 SCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKT 604
Query: 522 PGFSRVEKRN 531
PG S + +N
Sbjct: 605 PGCSWIVLKN 614
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 175/558 (31%), Positives = 279/558 (50%), Gaps = 45/558 (8%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
V Y+ L G C + ++ Q HA + + LN + + L+ Y G ++SAR +F
Sbjct: 141 VTYITLLTG-CNDLEVAKELYQAHAQIVKLGHHLN-HRVCNTLLDSYFKTGGLDSARRLF 198
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
++ + N M+ A G +EAI F M+ ++ + FTF+ V+ A VGL D
Sbjct: 199 LEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTA 258
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
G+Q+H + F +V VGNA +D YSK + R++F+ M E D VS+ +I+ Y
Sbjct: 259 FGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYA 318
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
V KV E++ LF+ ++ + F +
Sbjct: 319 WVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFR 378
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
N+++ YA+ G A F R+++ VP W AMIS Q LKLF M
Sbjct: 379 VSNSLVDMYAKCGKFEEADRIFLRLSSRSTVP----WTAMISANVQRGLHENGLKLFYEM 434
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+ + + T VL+A SI +G+++H+ V R G ++V++G AL+DMY+ C S+
Sbjct: 435 RRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASI 493
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
KDA FE +NV +WNA++ Y ++G +++ FE M+ G + + V+ + +L+AC
Sbjct: 494 KDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTAC 553
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH LVE+GL+ F M Y + +EHY +VD LCRSGR EA L+ Q+P +
Sbjct: 554 SHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIV 613
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMG-LRKPDGFVMLSNICAADGEWHEAENLRKIMK 514
+ N C IH LA + F M LR +V +SNI A G+W ++K M+
Sbjct: 614 WTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMR 673
Query: 515 EKNVQKQPGFSRVEKRNE 532
++ V+K P +S VE +++
Sbjct: 674 DRGVRKLPAYSWVEIKHK 691
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 177/384 (46%), Gaps = 32/384 (8%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N FS+ + G Y G++ AR +FD V M+ A + + F +A F+ M
Sbjct: 73 NSFSIDIIISG-YVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEM 131
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
+ + T+ +L C L K+ Q HA ++G + V N L+D Y K G L
Sbjct: 132 HRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGL 191
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
SARR+F M D VS+ MI+GY N +EA+ LF M+ G +P+ FT+ A+I++
Sbjct: 192 DSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISAS 251
Query: 225 ARRGDS----------------------NAAFAFFSRMTAEGFV-------PDL--VTWN 253
D+ NA F+S+ V P+L V++N
Sbjct: 252 VGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYN 311
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
+I+ +A + E++ LF+ + + N +L + +Q+GR++HA V
Sbjct: 312 VIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVS 371
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
D ++L+DMY+KCG ++A +F ++ W AMI + G+ ++ ++LF
Sbjct: 372 MADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLF 431
Query: 374 ERMLEEGMRANEVTLISVLSACSH 397
M + A++ T VL A ++
Sbjct: 432 YEMRRANVSADQATFACVLKASAN 455
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 150/376 (39%), Gaps = 79/376 (21%)
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCS---------------------------- 166
+ A + GF+ S N +I S+ G LC
Sbjct: 30 IDARIVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGN 89
Query: 167 ---ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------ 217
ARR+F ER VV+WT+MI Y ++ +A LF M G +P+ TY
Sbjct: 90 LTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTG 149
Query: 218 -----------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
N ++ SY + G ++A F M D
Sbjct: 150 CNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGW----D 205
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
V++N MI+G+A + EA++LF M G KP++ T V+ A G++IH
Sbjct: 206 SVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHG 265
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVD 367
V + +VF G+A +D YSK + + R LF E+ + V S+N +I Y G V
Sbjct: 266 FVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGV-SYNVIITAYAWVGKVK 324
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA-- 425
SI+LF+ + ++LS + ++ G R + + V ++ +
Sbjct: 325 ESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMG----RQLHAQVVVSMADPDFRVS 380
Query: 426 -CVVDMLCRSGRMVEA 440
+VDM + G+ EA
Sbjct: 381 NSLVDMYAKCGKFEEA 396
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 273/530 (51%), Gaps = 54/530 (10%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSA--R 67
L V+ L L C+ L Q KQ+H + L+ + +KL+ G R
Sbjct: 48 LLVSSLISKLDDCIN---LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPR 104
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
V + + N F+ ++ G F EAI + MR+ FTFS +LKAC +
Sbjct: 105 RVIEPVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMG 164
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D+ G+Q HA ++ V VGN +IDMY KCG + AR+VF M ERDV+SWT +I
Sbjct: 165 DLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELI- 223
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
A+YAR G+ +A F + +
Sbjct: 224 ----------------------------------AAYARVGNMESAADLFESLPTK---- 245
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
D+V W AM++GFAQ+ + EAL+ F M SGI+ + VTV G + A G+ +
Sbjct: 246 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 305
Query: 308 ALVCRMGLHID--VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+ + G V GSALIDMYSKCG++++A +F KNV S+++MI HG
Sbjct: 306 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGLATHGR 365
Query: 366 VDSSIELFERMLEE-GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY 424
+++LF M+ + ++ N VT + L+ACSH GLV++G ++F SM + +GV+ +++HY
Sbjct: 366 AQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPTRDHY 425
Query: 425 ACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
C+VD+L R+GR+ EA +L++ + + + GA C IH D+A E FE+
Sbjct: 426 TCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAEHLFEL-- 483
Query: 485 RKPD---GFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+PD +++LSN+ ++ G+W ++RK++KEK ++K P S V +N
Sbjct: 484 -EPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWVVDKN 532
>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
Length = 577
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 168/518 (32%), Positives = 263/518 (50%), Gaps = 52/518 (10%)
Query: 56 VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF--TGNFQEAIGYFSLMREF-IYRCN 112
+YA G + A +FD++P + ++W +M S F G+F G+F M+ YR +
Sbjct: 1 MYAKNGVLTDAAKLFDEMPMRDT--VSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLD 58
Query: 113 KFTFSIVLKAC----VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ T + +L AC +G ++ K VH +A GF+ ++SVGNALI Y KCG S
Sbjct: 59 QATLTTILSACDRPELGFVN----KMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGM 114
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
+VF M ER+V++WT++ISG +++ LF M +EPN TY
Sbjct: 115 QVFDEMLERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQ 174
Query: 218 ------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
+A++ Y++ G F D V+
Sbjct: 175 ALREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQ----LDKVSMT 230
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
+++GFAQ+ E EA++ F ML +G + ++ V+ VL G S+ +G++IH+LV +
Sbjct: 231 IILAGFAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKR 290
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
+ F G+ LI+MYSKCG L+D+ +F N SWN+MI + +HG +++L+
Sbjct: 291 SFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLY 350
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
+ M +G+ +VT +S+L ACSH GLVEKG+E +SM E + + EHYACVVDML R
Sbjct: 351 KEMRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGR 410
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G + EA + +P+ + A C IHG ++ E KP +++L
Sbjct: 411 AGLLNEAKTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPYILL 470
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+NI ++ G W E K MKE V K+ G S +E N
Sbjct: 471 ANIYSSKGRWKERAKTIKRMKEMCVAKETGISWIEIEN 508
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 179/395 (45%), Gaps = 58/395 (14%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C + + K VH L N S+ + L+ Y CG +S VFD++
Sbjct: 62 LTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEML 121
Query: 75 NPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
NV + W + S + +++++ F M + N T+ L AC GL +++G
Sbjct: 122 ERNV--ITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREG 179
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
Q+H ++G ++D V +AL+DMYSKCG + ++F + D VS T +++G+
Sbjct: 180 CQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQN 239
Query: 193 SKVDEAVVLFERMKLEGLE-----------------------------------PNQFTY 217
+EA+ F +M G E N F
Sbjct: 240 GFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVG 299
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
N +I Y++ GD + FSRM + V+WN+MI+ FA+ + AL+L+K M +
Sbjct: 300 NGLINMYSKCGDLEDSTKVFSRMPCM----NSVSWNSMIAAFARHGDGSRALQLYKEMRL 355
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIG-------REIHALVCRMGLHIDVFTGSALIDMYS 330
G++P +VT +L A G ++ G E+H L RM + + ++DM
Sbjct: 356 KGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHY------ACVVDMLG 409
Query: 331 KCGSLKDARTLFEITRIK-NVASWNAMIGCYGKHG 364
+ G L +A+T E IK +V W A++G G HG
Sbjct: 410 RAGLLNEAKTFIEGLPIKPDVLVWQALLGACGIHG 444
>gi|347954454|gb|AEP33727.1| chlororespiratory reduction 21 [Arabis hirsuta]
Length = 824
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 267/511 (52%), Gaps = 6/511 (1%)
Query: 27 KALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+ + +GKQ HA+ N L + + L + ++ Y G ++ A ++FD++ +V N ++
Sbjct: 280 RGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIDYAEMIFDRMIEKDVVTWNLLI 339
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
G + AI LMR + + T S ++ A ++K GK+V + FE
Sbjct: 340 SGYVHQGLVENAIYMCQLMRLENLKFDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFE 399
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+D+ + + +DMY+KCG + A++VF ++D++ W ++++ Y EA+ LF M
Sbjct: 400 SDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEM 459
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
+LE + PN T+N II S R G N A F +M + G P++++W M++G Q+
Sbjct: 460 QLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGTFPNMISWTTMMNGLVQNGCS 519
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT-GSA 324
EA+ + M SG++PN ++T L A S+ GR IH + R H + ++
Sbjct: 520 EEAILFLRKMQESGMRPNVFSITVALSACVNLASLHFGRSIHGYIIRNQQHSSSASIETS 579
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE--GMR 382
L+DMY+KCG + A +F + +NAMI Y +G V ++ L+ R LEE G++
Sbjct: 580 LVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAVALY-RSLEEDVGIK 638
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
+ +T+ +VLSAC+H G + + +EIF M ++G+K EHY +VD+L +G +A
Sbjct: 639 PDNITITNVLSACNHAGDINQAIEIFTDMVSKHGMKPCLEHYGLMVDLLASAGETEKALS 698
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRR-DLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
L+ ++P M + C + +L + + E +V +SN A +G
Sbjct: 699 LIEEMPYKPDARMIQSLVASCKKQQHKSELMDYLSSQLLESEPENSGNYVRVSNAYAVEG 758
Query: 502 EWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
W E +R++MK K ++K+PG S ++ + E
Sbjct: 759 SWDEVVKMREMMKVKGLKKKPGCSWIQVKGE 789
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 227/469 (48%), Gaps = 47/469 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIP 74
+L C+ + LR G+Q+HA + N + ++ +++KLV YA C + A ++F K+
Sbjct: 68 ILQGCVYXRDLRTGQQIHARILKNG-DFYARNEYIETKLVIFYAKCDALEVAEVLFSKLR 126
Query: 75 NPNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
NVF ++ G + A+ G+ ++ I+ N F V KAC L + G+
Sbjct: 127 VRNVFSWAAIIGVKCRIGLVEGALMGFVEMLENGIFPDN-FVVPNVCKACGALQWSRFGR 185
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH + G + V V ++L DMY KCG+L AR+VF + ER+VV+W +++ GY
Sbjct: 186 GVHGYVAKAGLHDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNG 245
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYN----------------------------------- 218
+EA+ L M+ EG+EP + T +
Sbjct: 246 MNEEAIRLLSDMRKEGVEPTRVTVSTCLSASANMRGIEEGKQSHAIAIVNGLELDNILGT 305
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+I+ Y + G + A F RM + D+VTWN +ISG+ A+ + + M +
Sbjct: 306 SILNFYCKVGLIDYAEMIFDRMIEK----DVVTWNLLISGYVHQGLVENAIYMCQLMRLE 361
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+K + VT++ ++ A T ++++G+E+ R D+ S +DMY+KCGS+ DA
Sbjct: 362 NLKFDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSVVDA 421
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+ +F+ T K++ WN ++ Y + G+ ++ LF M E + N +T ++ +
Sbjct: 422 KKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRN 481
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
G V + E+F M+ G + + +++ L ++G EA LR++
Sbjct: 482 GQVNEAKEMFLQMQSS-GTFPNMISWTTMMNGLVQNGCSEEAILFLRKM 529
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 133/533 (24%), Positives = 231/533 (43%), Gaps = 81/533 (15%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLN--IFSLKSKLVGVYAGCGD 62
IFP N + N + C + R G+ VH + L+ +F + S L +Y CG
Sbjct: 161 IFPDNFVVPN----VCKACGALQWSRFGRGVHGYVAKAGLHDCVF-VASSLADMYGKCGV 215
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
++ AR VFD+IP NV N +++ G +EAI S MR+ + T S L A
Sbjct: 216 LDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVEPTRVTVSTCLSA 275
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
+ I++GKQ HA+A G E D +G ++++ Y K GL+ A +F M E+DVV+W
Sbjct: 276 SANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIDYAEMIFDRMIEKDVVTW 335
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD------------- 229
+ISGY + V+ A+ + + M+LE L+ + T + ++++ AR +
Sbjct: 336 NLLISGYVHQGLVENAIYMCQLMRLENLKFDCVTLSTLMSAAARTQNLKLGKEVQCYCIR 395
Query: 230 ---------SNAAFAFFSRMTA---------EGFVPDLVTWNAMISGFAQSKRENEALKL 271
++ A +++ + DL+ WN +++ +A+S EAL+L
Sbjct: 396 HSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRL 455
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F M + + PN +T ++ + G + +E+ + M S
Sbjct: 456 FYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEM------------------FLQMQSS 497
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
N+ SW M+ ++G + +I +M E GMR N ++
Sbjct: 498 -------------GTFPNMISWTTMMNGLVQNGCSEEAILFLRKMQESGMRPNVFSITVA 544
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA-----YDLLRQ 446
LSAC + + G I + S +VDM + G + +A L +
Sbjct: 545 LSACVNLASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGDINKAERVFGSKLYSE 604
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
+P+Y N+M A+ ++G AV + E KPD + ++N+ +A
Sbjct: 605 LPLY--NAMISAYA----LYGNVKEAVALYRSLEEDVGIKPDN-ITITNVLSA 650
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 192/408 (47%), Gaps = 45/408 (11%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG--FENDVS 149
G +EA+ + M R F +L+ CV D++ G+Q+HA + G + +
Sbjct: 41 GEIREALSLVTEMDFRNLRIGPEIFGEILQGCVYXRDLRTGQQIHARILKNGDFYARNEY 100
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+ L+ Y+KC L A +F + R+V SW ++I C + V+ A++ F M G
Sbjct: 101 IETKLVIFYAKCDALEVAEVLFSKLRVRNVFSWAAIIGVKCRIGLVEGALMGFVEMLENG 160
Query: 210 LEPNQFTYNAIIAS-----YARRGDSNAAF---------AFFSRMTAEGF---------- 245
+ P+ F + + ++R G + F + A+ +
Sbjct: 161 IFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGVLDDAR 220
Query: 246 -----VPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
+P+ +V WNA++ G+ Q+ EA++L M G++P VTV+ L A
Sbjct: 221 KVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVEPTRVTVSTCLSASANMR 280
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
I+ G++ HA+ GL +D G+++++ Y K G + A +F+ K+V +WN +I
Sbjct: 281 GIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIDYAEMIFDRMIEKDVVTWNLLIS 340
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
Y G+V+++I + + M E ++ + VTL +++SA + ++ G E+ + Y ++
Sbjct: 341 GYVHQGLVENAIYMCQLMRLENLKFDCVTLSTLMSAAARTQNLKLGKEV-----QCYCIR 395
Query: 419 ISKEH----YACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
S E + VDM + G +V+A +D Q + + N++ A+
Sbjct: 396 HSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAY 443
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/516 (31%), Positives = 258/516 (50%), Gaps = 40/516 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
LV Y + A +F + N + N ++ + G +EAI F + + +
Sbjct: 181 LVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPS 240
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
FTF+ +L A VGL D K G+QVH + F +V VGNAL+D YSK + ++F
Sbjct: 241 DFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFX 300
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------- 217
M E D +S+ +I+ Y + E+ LF +++ + QF +
Sbjct: 301 EMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRM 360
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
NA++ YA+ A F + + VP W AMIS
Sbjct: 361 GRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVP----WTAMIS 416
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
+ Q + E + +F M +G+ + T +L+A SI +GR++H+L+ R G
Sbjct: 417 AYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMS 476
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
+V++GSAL+D Y+KCG + DA F +N SWNA+I Y ++G VD ++ F++M+
Sbjct: 477 NVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMI 536
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
+ G + + V+ +SVLSACSH G VE+ L F SM + Y V +EHY +VD+LCR+GR
Sbjct: 537 QSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRF 596
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM-GLRKPDGFVMLSNI 496
EA L+ ++P + M + N C IH +LA + F M LR ++ +SNI
Sbjct: 597 DEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNI 656
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
A G+W ++K M+++ V+K P +S VE +++
Sbjct: 657 YAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQ 692
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/510 (23%), Positives = 234/510 (45%), Gaps = 50/510 (9%)
Query: 29 LRQGKQVHALLCTNDL---NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
L +G VHA + + N SL + G + G ++ AR +FD + ++W +
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISLNMMISG-HLKFGKLSKARELFDGMVERTA--VSWTI 110
Query: 86 MASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQVHAVATQM 142
+ + + Q EA ++ MR + T + L + G L+ K Q+H ++
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL-VTLLSGFGELETKNVIVQIHTHVIKL 169
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G+E ++ V N+L+D Y K L A ++F M +D V++ S+++GY N +EA+ LF
Sbjct: 170 GYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF 229
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDS----------------------NAAFAFFSRM 240
+ G++P+ FT+ A++++ D+ NA ++S+
Sbjct: 230 LELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKH 289
Query: 241 TAEGFV-------PDL--VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
V P+L +++N +I+ +A + + E+ LF+ + + +L
Sbjct: 290 DQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLL 349
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
+ ++++GR+IH +G + + +AL+DMY+KC K+A+ +F+ K+
Sbjct: 350 SIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTV 409
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
W AMI Y + G + I +F M G+ A++ T S+L AC++ + G ++ S+
Sbjct: 410 PWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL-HSL 468
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT---NSMAGAFRNGCNIHGR 468
R G + + ++D + G M +A ++P + N++ A+ N+ G
Sbjct: 469 LIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDG- 527
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+ ++ + G KPD LS + A
Sbjct: 528 ---TLNSFQQMIQSGY-KPDSVSFLSVLSA 553
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 172/368 (46%), Gaps = 40/368 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL S LR G+Q+H T N S +++ LV +YA C A+ +FD I +
Sbjct: 348 LLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKS 407
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+ W M SA+ G +E I FS MR ++ TF+ +L+AC L I G+Q+
Sbjct: 408 T--VPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL 465
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H++ + GF ++V G+AL+D Y+KCG + A + F M ER+ VSW ++IS Y V
Sbjct: 466 HSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNV 525
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA-EGFVPDLVTWNA 254
D + F++M G +P+ ++ +++++ + G A F+ MT P + +
Sbjct: 526 DGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTS 585
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M+ ++ R +EA KL M +P+ + + VL + CR+
Sbjct: 586 MVDVLCRNGRFDEAEKLMTEM---PFEPSEIMWSSVLNS-----------------CRIH 625
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+ ++ + K A LF + +++ A + M Y G D+ ++ +
Sbjct: 626 KNHEL--------------AKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKK 671
Query: 375 RMLEEGMR 382
M + G+R
Sbjct: 672 AMRDRGVR 679
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 186/390 (47%), Gaps = 19/390 (4%)
Query: 32 GKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G+QVH + + N+F + + L+ Y+ V+ +F ++P + N ++ + A
Sbjct: 260 GQQVHGFVLKTNFVWNVF-VGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYA 318
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
+ G F+E+ F ++ + +F F+ +L L+++ G+Q+H A +G +
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
V NAL+DMY+KC A+++F + + V WT+MIS Y K +E + +F M+ G
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
+ +Q T+ +I+ + A + S + GF+ ++ + +A++ +A+ +A+
Sbjct: 439 VPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAI 498
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
K F M N ++ Q G + G++ +++ + G D + +++
Sbjct: 499 KSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQM----IQSGYKPDSVSFLSVLSAC 554
Query: 330 SKCGSLKDARTLF-EITRIKNVAS----WNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
S CG +++A F +T+I V + +M+ ++G D + +L M E +
Sbjct: 555 SHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKL---MTEMPFEPS 611
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKER 414
E+ SVL++C + K E+ + +R
Sbjct: 612 EIMWSSVLNSCR----IHKNHELAKKAADR 637
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 170/442 (38%), Gaps = 98/442 (22%)
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
YR F ++ + + + A + GF + N ++ + + G L A
Sbjct: 4 YRATLFQNLVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAH 63
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
+VF M ++ +S MISG+ K+ +A LF+ M +E ++ +I Y +
Sbjct: 64 QVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGM----VERTAVSWTILIGGYLQSN 119
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
S AF ++ M G PD VT ++SGF + ++ NV V
Sbjct: 120 QSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGE------------------LETKNVIV- 160
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
+IH V ++G ++ ++L+D Y K L A LF+ K
Sbjct: 161 ----------------QIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNK 204
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC-----------SH 397
+ ++N+++ Y G+ + +IELF + G++ ++ T ++LSA H
Sbjct: 205 DTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVH 264
Query: 398 GGLVEKGL------------------------EIFRSMKERYGVKISKEHYACVVDMLCR 433
G +++ ++F M E G+ Y V+
Sbjct: 265 GFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGIS-----YNVVITSYAW 319
Query: 434 SGRMVEAYDLL----------RQVPMYVTNSMAGA---FRNGCNIHGRRDLAVTMGEEFF 480
+G+ E++DL RQ P S+A + R G IH + A+T+G F
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQ---AITVGANFE 376
Query: 481 EMGLRKPDGFVMLSNICAADGE 502
R + V + C D E
Sbjct: 377 S---RVENALVDMYAKCNGDKE 395
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 298/586 (50%), Gaps = 71/586 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+ L+ + K+ Q KQ+HA + S ++ +Y ++ A L+F + +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKS 67
Query: 76 PNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P V L W + FT F +A+ F MR + F VLK+C ++D++ G+
Sbjct: 68 PPV--LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSK--------------------------------- 160
VH ++G + D+ GNAL++MY+K
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 161 CGL---LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
C + + S RRVF M +DVVS+ ++I+GY ++A+ + M L+P+ FT
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 218 NAIIASYA----------------RRG-DSN--------------AAFAFFSRMTAEGFV 246
++++ ++ R+G DS+ A R+ + +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
D ++WN++++G+ Q+ R NEAL+LF+ M+ + +KP V + V+ A ++ +G+++
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H V R G ++F SAL+DMYSKCG++K AR +F+ + + SW A+I + HG
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
++ LFE M +G++ N+V ++VL+ACSH GLV++ F SM + YG+ EHYA
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
V D+L R+G++ EAY+ + ++ + T S+ + C++H +LA + E+ F +
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545
Query: 487 PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+V++ N+ A++G W E LR M++K ++K+P S +E +N+
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNK 591
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 278/549 (50%), Gaps = 40/549 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C AL +G Q+H+ ++ L+ L+ +Y+ C DV +A F N
Sbjct: 368 LLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETEN 427
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ + N M++A N ++ F M+ N+FT+ +L+ C L + G+Q+H
Sbjct: 428 IVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHT 487
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ GF+ +V V + LIDMY+K G L A R+ + E DVVSWT+MI+GY E
Sbjct: 488 HVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSE 547
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
A+ LFE M+ G++ + + NA+I+
Sbjct: 548 ALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALIS 607
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YAR G A+ F ++ + + ++WN+++SG AQS EAL++F ML + +
Sbjct: 608 LYARCGRIQEAYLAFEKIGDK----NNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEV 663
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N T + A +I+ G++IH++V + G + ++LI +Y+K GS+ DA F
Sbjct: 664 NMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREF 723
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+NV SWNAMI Y +HG ++ LFE M G+ N VT + VLSACSH GLV+
Sbjct: 724 NDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVK 783
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+GL+ F SM + + + EHY CVVD+L R+G++ A + ++++P+ + +
Sbjct: 784 EGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSA 843
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IH ++ E+ +V++SNI A +W + RK+MK+ V+K+P
Sbjct: 844 CVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEP 903
Query: 523 GFSRVEKRN 531
G S +E +N
Sbjct: 904 GRSWIEVKN 912
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 143/473 (30%), Positives = 233/473 (49%), Gaps = 45/473 (9%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDK 72
NYL LL C+ S +L + ++H + + + L LV Y GD + A VFD+
Sbjct: 60 NYL-WLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDE 118
Query: 73 IPNPNVFMLNWMVMA-SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG-LLDIK 130
N +VF N M+ A NFQ + ++ E I N +TF+ VLKACVG +
Sbjct: 119 NSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGI-TPNGYTFAGVLKACVGGDIAFN 177
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
KQVH+ GF++ V N LID+YSK G + SA++VF+ + +D+V+W +MISG
Sbjct: 178 YVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLS 237
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQF---------------------------------TY 217
+EA++LF M + P + TY
Sbjct: 238 QNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETY 297
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
N ++A Y+R +A FS M + D V++N++ISG Q + AL+LF M
Sbjct: 298 VCNGLVALYSRSRKLISAERIFSTMNSR----DGVSYNSLISGLVQQGFSDRALELFTKM 353
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+KP+ +TV +L A G++ G ++H+ + G+ D+ +L+D+YSKC +
Sbjct: 354 QRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADV 413
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ A F T +N+ WN M+ YG+ + S E+F +M EGM N+ T S+L C
Sbjct: 414 ETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTC 473
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ G + G +I + + G +++ + ++DM + G++ A +LR++P
Sbjct: 474 TSLGALYLGEQIHTHVI-KTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP 525
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 203/427 (47%), Gaps = 46/427 (10%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYR 110
L+ +Y+ G + SA+ VF+ I ++ + W+ M S + N +EAI F M
Sbjct: 201 LIDLYSKNGYIESAKKVFNCICMKDI--VTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ S VL A + + G+Q+H + + GF ++ V N L+ +YS+ L SA R+
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------- 223
F M RD VS+ S+ISG D A+ LF +M+ + L+P+ T +++++
Sbjct: 319 FSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGAL 378
Query: 224 ----------------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
Y++ D A FF E ++V WN M
Sbjct: 379 HKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETE----NIVLWNVM 434
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ + Q +++ ++F+ M + G+ PN T +L+ G++ +G +IH V + G
Sbjct: 435 LVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGF 494
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
++V+ S LIDMY+K G L A + +V SW AMI Y +H M +++LFE
Sbjct: 495 QLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEE 554
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRS 434
M G++ + + S +SAC+ + +G +I +S +G +S + ++ + R
Sbjct: 555 MEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN--ALISLYARC 612
Query: 435 GRMVEAY 441
GR+ EAY
Sbjct: 613 GRIQEAY 619
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 234/505 (46%), Gaps = 49/505 (9%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDV 63
IFP + L +L K + G+Q+H L+ + + + + LV +Y+ +
Sbjct: 257 IFPTPYV----LSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKL 312
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
SA +F + + + N ++ G A+ F+ M+ + + T + +L AC
Sbjct: 313 ISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSAC 372
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+ + KG Q+H+ A + G D+ + +L+D+YSKC + +A + F ++V W
Sbjct: 373 ASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWN 432
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-------------------- 223
M+ Y + + ++ +F +M++EG+ PNQFTY +I+ +
Sbjct: 433 VMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT 492
Query: 224 ---------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
YA+ G A R+ + D+V+W AMI+G+ Q +EA
Sbjct: 493 GFQLNVYVCSVLIDMYAKYGQLALALRILRRLPED----DVVSWTAMIAGYVQHDMFSEA 548
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L+LF+ M GI+ +N+ + A +++ G++IHA G D+ +ALI +
Sbjct: 549 LQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISL 608
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y++CG +++A FE KN SWN+++ + G + ++++F RML N T
Sbjct: 609 YARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTY 668
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY----DLL 444
S +SA + +++G +I SM + G +E ++ + +SG + +A+ D+
Sbjct: 669 GSAISAAASLANIKQGQQI-HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS 727
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRR 469
+ + + G ++GC + R
Sbjct: 728 ERNVISWNAMITGYSQHGCGMEALR 752
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 160/342 (46%), Gaps = 32/342 (9%)
Query: 98 IGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDM 157
I + M E R N + +L+ C+ + + ++H ++ GF+ + + ++L+D
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 158 YSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
Y + G A +VF R V SW MI + + LF RM EG+ PN +T+
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 218 NAIIAS---------YARRGDSNAAFAFFSR-----------MTAEGFV----------- 246
++ + Y ++ S + F + G++
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222
Query: 247 -PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
D+VTW AMISG +Q+ E EA+ LF M S I P ++ VL A ++G +
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+H LV + G H + + + L+ +YS+ L A +F ++ S+N++I + G
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
D ++ELF +M + ++ + +T+ S+LSAC+ G + KG+++
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQL 384
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 4/180 (2%)
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
+SKR ++L M G++ N +L+ +GS+ +H + + G +
Sbjct: 39 KSKR----IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPL 94
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
+L+D Y + G A +F+ ++V SWN MI + LF RML EG
Sbjct: 95 LIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEG 154
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ N T VL AC G + ++ S YG S ++D+ ++G + A
Sbjct: 155 ITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 289/570 (50%), Gaps = 53/570 (9%)
Query: 20 LGKCMKSKALRQ----GKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
LG ++S A+ + G Q+ +L + L N+F+ S L+ VYA CG V AR VFD +
Sbjct: 96 LGSALRSAAVARRPAIGAQLQSLALKSGLANNVFA-ASALLDVYAKCGRVRDARQVFDGM 154
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG----LLDI 129
P N N ++ +G+ A+ F M ++ TF+ +L A G L+
Sbjct: 155 PERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLM-- 212
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE-RDVVSWTSMISG 188
Q+H + G ++V NA I YS+CG L +RR+F G+ + RD++SW +M+
Sbjct: 213 ---HQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGA 269
Query: 189 YCNVSKVDEAVVLFERMKLE-GLEPNQFTYNAIIASYARRGDS----------------- 230
Y + DEA+ F RM E G+ P+ +++ +II+S + G
Sbjct: 270 YTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALE 329
Query: 231 ------NAAFAFFSR-----MTAEGF-------VPDLVTWNAMISGFAQSKRENEALKLF 272
NA A ++R M + + + D V+WN+M++G++Q +ALK F
Sbjct: 330 GVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFF 389
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
+ M ++ + + L++ +Q+G++IH LV G + F S+LI MYSK
Sbjct: 390 RCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKS 449
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G + DAR FE + WNAMI Y +HG ++ LF ML+ + +T + ++
Sbjct: 450 GIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLI 509
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
++CSH GLV++G EI +M+ +YGV + EHYAC VD+ R+G++ +A L+ +P
Sbjct: 510 TSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPD 569
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
+ C IHG +LA + F R+ +V+LS++ + G W + ++++
Sbjct: 570 AMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRV 629
Query: 513 MKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
MK++ + K PG+S +E +NE +++S
Sbjct: 630 MKKRGLSKVPGWSWIEVKNEVHSFNAEDKS 659
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 181/382 (47%), Gaps = 42/382 (10%)
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
+AR VFD++P + N ++ A A +G EA M N F L++
Sbjct: 45 AARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAA 104
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
G Q+ ++A + G N+V +AL+D+Y+KCG + AR+VF GM ER+ VSW +
Sbjct: 105 VARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNA 164
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------- 217
+I+GY + A+ LF M+ EGL P++ T+
Sbjct: 165 LIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGS 224
Query: 218 -------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
NA I +Y++ G + F + G + DL++WNAM+ + + ++EA+K
Sbjct: 225 ALGLTVLNAAITAYSQCGSLKDSRRIFDGI---GDIRDLISWNAMLGAYTHNGMDDEAMK 281
Query: 271 LFKGMLV-SGIKPNNVTVTGVLQAGGLTG-SIQIGREIHALVCRMGLHIDVFTGSALIDM 328
F M+ SG+ P+ + T ++ + G GR IH LV + L +ALI M
Sbjct: 282 FFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAM 341
Query: 329 YSKCGS---LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
Y++ ++DA F +K+ SWN+M+ Y +HG+ +++ F M E +R +E
Sbjct: 342 YTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDE 401
Query: 386 VTLISVLSACSHGGLVEKGLEI 407
+ L + S +++ G +I
Sbjct: 402 YAFSAALRSSSELAVLQLGKQI 423
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 147/298 (49%), Gaps = 44/298 (14%)
Query: 152 NALIDMYSKCGL--LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
N L+ YS+ L +ARRVF + RD VSW ++++ EA L M +G
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 210 LEPNQFTYNAII--ASYARR--------------GDSNAAFAFF--------------SR 239
L N F + + A+ ARR G +N FA +R
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 240 MTAEGFVP-DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
+G + V+WNA+I+G+ +S AL+LF M G+ P+ T +L A + G
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTA--VEG 206
Query: 299 -SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE-ITRIKNVASWNAM 356
S + ++H + + G + + +A I YS+CGSLKD+R +F+ I I+++ SWNAM
Sbjct: 207 PSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAM 266
Query: 357 IGCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACS------HGGLVEKGLEI 407
+G Y +GM D +++ F RM++E G+ + + S++S+CS H G V GL I
Sbjct: 267 LGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVI 324
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
+N ++ +Y+R A A R+ E D V+WNA+++ A S EA +L + M
Sbjct: 28 WNQLLTAYSRSSPDGLAAA--RRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMH 85
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
G+ N + L++ + IG ++ +L + GL +VF SAL+D+Y+KCG ++
Sbjct: 86 AQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVR 145
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
DAR +F+ +N SWNA+I Y + G + S++ELF M EG+ +E T S+L+A
Sbjct: 146 DARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVE 205
Query: 397 ----------HGGLVEKG 404
HG +V+ G
Sbjct: 206 GPSCFLMHQLHGKIVKYG 223
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 175/619 (28%), Positives = 296/619 (47%), Gaps = 104/619 (16%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDK 72
N+ LL C ++ + K +H+ ++ T L + L+ YA G + A VFD+
Sbjct: 10 NHYCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQ 69
Query: 73 IPNPNVFMLNWMVMASAFTGNFQE------------AIGYFSLMREF-----IYRC---- 111
+P+PN++ N ++ A + G E + + SL+ + IY+
Sbjct: 70 MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 129
Query: 112 ------------NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYS 159
N+ TFS +L +K G+Q+H + GF + V VG+ L+DMYS
Sbjct: 130 NLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYS 189
Query: 160 KCGLLCSARRVFHG-------------------------------MFERDVVSWTSMISG 188
K G++ AR+VF M ERD +SWTSMI+G
Sbjct: 190 KMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITG 249
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------- 223
+ +A+ +F MKLE L+ +Q+T+ +++ +
Sbjct: 250 FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDN 309
Query: 224 ----------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
Y + + +A A F +MT + ++V+W AM+ G+ Q+ EA+K F
Sbjct: 310 IFVASALVDMYCKCKNIKSAEAVFKKMTCK----NVVSWTAMLVGYGQNGYSEEAVKTFS 365
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
M GI+P++ T+ V+ + S++ G + HA GL + +AL+ +Y KCG
Sbjct: 366 DMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCG 425
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
S++D+ LF K+ +W A++ Y + G + +I LFE ML G++ ++VT I VLS
Sbjct: 426 SIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLS 485
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
ACS GLVEKG +IF SM +G+ ++HY C++D+ R+GR+ EA + + ++P
Sbjct: 486 ACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDA 545
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIM 513
+ C +G D+ E E+ +V+LS++ AA G+W E LRK M
Sbjct: 546 ISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDM 605
Query: 514 KEKNVQKQPGFSRVEKRNE 532
++K ++K+PG S ++ +N+
Sbjct: 606 RDKGLRKEPGCSWIKYKNQ 624
>gi|347954460|gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella bursa-pastoris]
Length = 820
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/536 (28%), Positives = 266/536 (49%), Gaps = 6/536 (1%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVY 57
RL+ + V + C+ + A + +G Q HA+ N L + + L + L+ Y
Sbjct: 249 RLLSDMRKDGVEPTRVTVSTCLSASANMAGVEEGTQCHAIAIVNGLELDNILGTSLLNFY 308
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
G + A ++FD++ +V N ++ G ++AI LMR + + T +
Sbjct: 309 CKVGLIEYAEMIFDRMFEKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLA 368
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
++ A ++K GK+V + E+D+ + + +DMY+KCG + A++VF E+
Sbjct: 369 TLMSAAARTENLKLGKEVQCXCFRHSLESDIVLASTAMDMYAKCGSIVDAKKVFDSTVEK 428
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
D++ W ++++ Y EA+ LF M+LE + PN T+N II S R + N A F
Sbjct: 429 DLILWNTLLAAYAESGHSGEALRLFYEMQLESVPPNVITWNLIILSRLRNAEVNEAKEMF 488
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+M + G P+L++W M++G Q+ EA+ + M SG++PN ++T L A
Sbjct: 489 LQMQSSGITPNLISWTTMMNGMVQNGCSEEAIHFLRKMQESGMRPNAFSITVALSASANL 548
Query: 298 GSIQIGREIHALVCRMGLHIDVFT-GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
S GR IH + R H + ++L+DMY+KCG + A +FE + +NAM
Sbjct: 549 ASXHFGRSIHGYIIRNLRHSSSASIETSLVDMYAKCGDINKAERVFESKLSNELPLYNAM 608
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I Y G V ++ L+ + + G + + +T S+LSAC+H G +++ + +F M +G
Sbjct: 609 ISAYALXGNVTEAVALYRSLEDMGXKPDSITFTSLLSACNHAGDIDQAIRVFTDMVSNHG 668
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
VK EHY +VD+ + +A L+ ++P M + CN + +L +
Sbjct: 669 VKPCLEHYGLLVDLFASAKETDKALRLMEEMPYKPDXRMIQSLVASCNKQHKTELVDYLS 728
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ E +V +SN A +G W E R++MK K ++K+PG S ++ + E
Sbjct: 729 RQLLETEPEXSGNYVTISNAYAVEGSWDEVVKTREMMKAKGLKKKPGCSWIQIKGE 784
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 228/468 (48%), Gaps = 45/468 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN-DLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C+ + L GKQ+HA + N DL + +++KLV YA C D+ A ++F K+
Sbjct: 65 ILQGCVYERDLCTGKQIHARILKNGDLYARNEYIETKLVIFYAKCDDLEIAEVLFSKLRV 124
Query: 76 PNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NVF ++ G + A+ G+ ++ I+ N F V KAC L + G+
Sbjct: 125 RNVFSWAAIIGVKCRMGLCEGALMGFVEMLENEIFPDN-FVVPNVFKACGALQWSRFGRG 183
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + G E+ V V ++L DMY KCG+L AR+VF + ER+VV+W +++ GY
Sbjct: 184 VHGYVLKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGM 243
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------------- 223
+EA+ L M+ +G+EP + T + +++
Sbjct: 244 NEEAIRLLSDMRKDGVEPTRVTVSTCLSASANMAGVEEGTQCHAIAIVNGLELDNILGTS 303
Query: 224 ----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
Y + G A F RM F D+VTWN +ISG+ Q +A+ + + M +
Sbjct: 304 LLNFYCKVGLIEYAEMIFDRM----FEKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLEK 359
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+K + VT+ ++ A T ++++G+E+ R L D+ S +DMY+KCGS+ DA+
Sbjct: 360 LKYDCVTLATLMSAAARTENLKLGKEVQCXCFRHSLESDIVLASTAMDMYAKCGSIVDAK 419
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ T K++ WN ++ Y + G ++ LF M E + N +T ++ +
Sbjct: 420 KVFDSTVEKDLILWNTLLAAYAESGHSGEALRLFYEMQLESVPPNVITWNLIILSRLRNA 479
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
V + E+F M+ G+ + + +++ + ++G EA LR++
Sbjct: 480 EVNEAKEMFLQMQSS-GITPNLISWTTMMNGMVQNGCSEEAIHFLRKM 526
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 200/445 (44%), Gaps = 52/445 (11%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG--FENDVS 149
G +EA+ + M R + +L+ CV D+ GKQ+HA + G + +
Sbjct: 38 GEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGDLYARNEY 97
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+ L+ Y+KC L A +F + R+V SW ++I C + + A++ F M
Sbjct: 98 IETKLVIFYAKCDDLEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLCEGALMGFVEMLENE 157
Query: 210 LEPNQFTYNAIIAS-----YARRGDSNAAF---------AFFSRMTAEGF---------- 245
+ P+ F + + ++R G + F + A+ +
Sbjct: 158 IFPDNFVVPNVFKACGALQWSRFGRGVHGYVLKAGLEDCVFVASSLADMYGKCGVLDDAR 217
Query: 246 -----VPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
+P+ +V WNA++ G+ Q+ EA++L M G++P VTV+ L A
Sbjct: 218 KVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKDGVEPTRVTVSTCLSASANMA 277
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++ G + HA+ GL +D G++L++ Y K G ++ A +F+ K+V +WN +I
Sbjct: 278 GVEEGTQCHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFEKDVVTWNLLIS 337
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI----FRSMKER 414
Y + G+V+ +I + + M E ++ + VTL +++SA + ++ G E+ FR E
Sbjct: 338 GYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCXCFRHSLES 397
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
V S +DM + G +V+A +D + + + N++ A+ G
Sbjct: 398 DIVLAST-----AMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAES----GHSGE 448
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNI 496
A+ + F+EM L V+ N+
Sbjct: 449 ALRL---FYEMQLESVPPNVITWNL 470
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
P ++ +S ++ EAL L M ++ +LQ + G++I
Sbjct: 22 PSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQI 81
Query: 307 HALVCRMG--LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHG 364
HA + + G + + + L+ Y+KC L+ A LF R++NV SW A+IG + G
Sbjct: 82 HARILKNGDLYARNEYIETKLVIFYAKCDDLEIAEVLFSKLRVRNVFSWAAIIGVKCRMG 141
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE----IFR 409
+ + ++ F MLE + + + +V AC HG +++ GLE +
Sbjct: 142 LCEGALMGFVEMLENEIFPDNFVVPNVFKACGALQWSRFGRGVHGYVLKAGLEDCVFVAS 201
Query: 410 SMKERYG 416
S+ + YG
Sbjct: 202 SLADMYG 208
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 273/545 (50%), Gaps = 34/545 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL C K+ AL Q Q + N + + +V + G + AR +FD P+P V
Sbjct: 31 LLRSC-KTVALLQKVQAQIITHGFQYNGY-VAPNVVTSWVGLKQMAHARHLFDHFPDPKV 88
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
+ N + ++E + F M+ R N FTF +VLK+C + +G+++H
Sbjct: 89 ELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCE 148
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV--- 195
+ G E + V LID+YS + SA ++F GM ER++V+WTSMISGY ++V
Sbjct: 149 VIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALA 208
Query: 196 --------DEAVVLFERM--------------KLEGLEP--NQFTYNAIIASYARRGDSN 231
+ VVL+ M KL P + ++N ++ YA GD
Sbjct: 209 RRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVE 268
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGV 290
A F M ++ +WN +I G+A + E L+ FK ML+ G + PN+ T+ V
Sbjct: 269 ACEQLFEEMPER----NVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTV 324
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A G++ +G+ +H +G ++ G+ALIDMYSKCG +++A +FE +K++
Sbjct: 325 LSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDL 384
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+WN+MI HG ++ LF +M G + + +T I VL +C+H GLVE+G F S
Sbjct: 385 ITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNS 444
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M Y + EHY C+VD+ R+G + A + ++++PM + A C I+ D
Sbjct: 445 MVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNID 504
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
LA ++ + + P +V+LSNI G W + L+ +M++ +K PG S +E
Sbjct: 505 LAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVN 564
Query: 531 NEFVE 535
+ VE
Sbjct: 565 DSVVE 569
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 173/528 (32%), Positives = 272/528 (51%), Gaps = 40/528 (7%)
Query: 39 LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAI 98
L ++ ++ F + S + +YA G V+ AR +FD N + N M+ EAI
Sbjct: 247 LGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAI 306
Query: 99 GYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDM 157
F +M + + TF L A L + G+Q+HA + V + NA+I M
Sbjct: 307 DLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVM 366
Query: 158 YSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
YS+CG + ++ +VF M ERDVV+W +M+S + DE ++L M+ +G + T
Sbjct: 367 YSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTL 426
Query: 218 NAIIA----------------------------------SYARRGDSNAAFAFFSRMTAE 243
A+++ YA+ G A F + +
Sbjct: 427 TALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGYLIDMYAKSGLITTAQQLFEKNSX- 485
Query: 244 GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
+ D TWNAMI+G+ Q+ E +F+ M+ ++PN VT+ +L A G+I +G
Sbjct: 486 -YDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLG 544
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
++IH R L+ +VF G+AL+DMYSK G++ A +F T KN ++ MI YG+H
Sbjct: 545 KQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQH 604
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
GM + ++ LF ML G++ + VT +++LSACS+ GLV++GL IF+SM+ Y ++ S EH
Sbjct: 605 GMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEH 664
Query: 424 YACVVDMLCRSGRMVEAYDLLRQV-PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM 482
Y CV DML R GR+ EAY+ ++ + T + G+ C IHG +L + + EM
Sbjct: 665 YCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLEM 724
Query: 483 --GLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
G V+LSNI AA+G W + +RK M++K + K+ G S VE
Sbjct: 725 EKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVE 772
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 205/461 (44%), Gaps = 56/461 (12%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIY-RCNKFTFSIV 119
G + A +FD IP P + N +++ +A+ +++ MR + + +TFS
Sbjct: 51 GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSST 110
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC----GLLCSA-------- 167
LKAC +K GK +H + F + V N+L++MYS C L +A
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170
Query: 168 -RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
RRVF M +R+VV+W +MIS Y ++ EA +F M G+ P ++ + + R
Sbjct: 171 VRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWR 230
Query: 227 RGDSNAAFAFFSRMTAEG--FVPDLV-------------------------------TWN 253
D + A + + G +V D WN
Sbjct: 231 MNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWN 290
Query: 254 AMISGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
MI G+ Q+ EA+ LF ++ S ++VT L A + +GR++HA + +
Sbjct: 291 TMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILK 350
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
+ V +A+I MYS+CGS+ + +F ++V +WN M+ + ++G+ D + L
Sbjct: 351 SSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLML 410
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
M ++G + VTL ++LS S+ E G + + R+G++ ++DM
Sbjct: 411 VFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLI-RHGIQFEGMD-GYLIDMYA 468
Query: 433 RSGRMVEAYDLLRQVPMY-----VTNSM-AGAFRNGCNIHG 467
+SG + A L + Y N+M AG +NG + G
Sbjct: 469 KSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEG 509
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 136/295 (46%), Gaps = 7/295 (2%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
L LL ++ GKQ HA L + + + L+ +YA G + +A+ +F+K
Sbjct: 426 LTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGYLIDMYAKSGLITTAQQLFEKNSX 485
Query: 76 PNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+ W M + +T N +E F M E R N T + +L AC + I GK
Sbjct: 486 YDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGK 545
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H A + +V VG AL+DMYSK G + A VF E++ V++T+MI Y
Sbjct: 546 QIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHG 605
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTW 252
+ A+ LF M G++P+ T+ AI+++ + G + F M E + P +
Sbjct: 606 MGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHY 665
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG-VLQAGGLTGSIQIGREI 306
+ + R EA + KG+ G + N + G +L A + G ++G+ +
Sbjct: 666 CCVADMLGRVGRVXEAYEFVKGL---GEEGNTFRIWGSLLGACRIHGEFELGKVV 717
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 278/547 (50%), Gaps = 42/547 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LG C +S+ G+Q+H + L N + + L+ +Y+ CG V A VF + + +
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
+ N MV A A A+ F MR+ + FT S V+ C L GK VHA
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ ++ ++ +AL+ +YSKCG A VF M E+D+V+W S+ISG C K EA
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 199 VVLFERMKLE-------------------------------------GLEPNQFTYNAII 221
+ +F MK + GL N F +++I
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y++ G A F+ M+ E ++V WN+MIS ++++ ++ LF ML GI
Sbjct: 519 DLYSKCGLPEMALKVFTSMSTE----NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIF 574
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P++V++T VL A T S+ G+ +H R+G+ D +ALIDMY KCG K A +
Sbjct: 575 PDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENI 634
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ + K++ +WN MI YG HG +++ LF+ M + G ++VT +S++SAC+H G V
Sbjct: 635 FKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFV 694
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
E+G IF MK+ YG++ + EHYA +VD+L R+G + EAY ++ +P+ +S+ +
Sbjct: 695 EEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLS 754
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
H +L + E+ M + +V L N+ G +EA L +MKEK + KQ
Sbjct: 755 ASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQ 814
Query: 522 PGFSRVE 528
PG S +E
Sbjct: 815 PGCSWIE 821
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 251/530 (47%), Gaps = 54/530 (10%)
Query: 30 RQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPN-PNVFMLNWMVMA 87
+GKQ+H + N L+ S LK+ L+ +Y G A VF +I + NV + N M++
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+G + ++ + L + + +F+ L AC + G+Q+H +MG ND
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHND 306
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V +L+ MYSKCG++ A VF + ++ + W +M++ Y A+ LF M+
Sbjct: 307 PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 208 EGLEPNQFT-------------YN----------------------AIIASYARRGDSNA 232
+ + P+ FT YN A++ Y++ G
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPD 426
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML--VSGIKPNNVTVTGV 290
A+ F M + D+V W ++ISG ++ + EALK+F M +KP++ +T V
Sbjct: 427 AYLVFKSMEEK----DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSV 482
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
A +++ G ++H + + GL ++VF GS+LID+YSKCG + A +F +N+
Sbjct: 483 TNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENM 542
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+WN+MI CY ++ + + SI+LF ML +G+ + V++ SVL A S + KG +
Sbjct: 543 VAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL-HG 601
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV---PMYVTNSMAGAFRNGCNIHG 467
R G+ ++DM + G A ++ +++ + N M + + HG
Sbjct: 602 YTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGS----HG 657
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRKIMKE 515
A+++ +E + G PD LS I C G E +N+ + MK+
Sbjct: 658 DCITALSLFDEMKKAG-ESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQ 706
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 194/445 (43%), Gaps = 96/445 (21%)
Query: 114 FTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
FTF +LKAC L ++ GK +H +G+ D + +L++MY KCG L A +VF G
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 174 MFE-------RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
+ RDV W SMI GY + E V F RM + G+ P+ F+ + +++ +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 227 RGDSN-------AAFAFFSRMTAEGFV---------------------------PDLVTW 252
G+ F + + + F+ ++V W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N MI GF S +L L+ + +K + + TG L A + + GR+IH V +
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
MGLH D + ++L+ MYSKCG + +A T+F K + WNAM+ Y ++ S+++L
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 373 FERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE--------------- 406
F M ++ + + TL +V+S CS H L ++ ++
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSK 420
Query: 407 ---------IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL------------- 444
+F+SM+E+ V + ++ LC++G+ EA +
Sbjct: 421 CGCDPDAYLVFKSMEEKDMVA-----WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPD 475
Query: 445 RQVPMYVTNSMAG--AFRNGCNIHG 467
+ VTN+ AG A R G +HG
Sbjct: 476 SDIMTSVTNACAGLEALRFGLQVHG 500
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 198/449 (44%), Gaps = 54/449 (12%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
SV LL C L GK +H ++ + F + + LV +Y CG ++ A V
Sbjct: 59 SVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPF-IATSLVNMYVKCGFLDYAVQV 117
Query: 70 FDK-------IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
FD + +V + N M+ F+E +G F M F R + F+ SIV+
Sbjct: 118 FDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSV 177
Query: 123 CV--GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER-DV 179
G ++GKQ+H + + D + ALIDMY K GL A RVF + ++ +V
Sbjct: 178 MCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNV 237
Query: 180 VSWTSMISGYCNVSKVDEAVVLF-----ERMKL--------------------------- 207
V W MI G+ + ++ L+ +KL
Sbjct: 238 VLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCD 297
Query: 208 ---EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
GL + + ++++ Y++ G A FS + + L WNAM++ +A++
Sbjct: 298 VVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDK----RLEIWNAMVAAYAENDY 353
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
AL LF M + P++ T++ V+ + G G+ +HA + + + SA
Sbjct: 354 GYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESA 413
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML--EEGMR 382
L+ +YSKCG DA +F+ K++ +W ++I K+G ++++F M ++ ++
Sbjct: 414 LLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLK 473
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSM 411
+ + SV +AC+ + GL++ SM
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSM 502
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 274/550 (49%), Gaps = 57/550 (10%)
Query: 33 KQVHALLCTNDLNIFSLK-----SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
KQ+H L+ T+ IF + S+L+ AR + +I P++ + W +
Sbjct: 19 KQIHCLVLTSP--IFYTRRDLFLSRLLRRCTAATQFRYARRLLCQIQTPSIQL--WDSLV 74
Query: 88 SAFTG----NFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
F+G N + + + MR ++ TF +LKA L D Q HA + G
Sbjct: 75 GHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAVFKLRDANPF-QFHAHILKFG 133
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
F++D+ V N+LI YS CGL RVF G ++DVVSWT+MI G+ EA+ F
Sbjct: 134 FDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFV 193
Query: 204 RMKLEGLEPNQFTYNAIIAS------------------------------------YARR 227
MK G+ N+ T +++ + Y +
Sbjct: 194 EMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKC 253
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
G + A F M + ++VTW A+I+G+ Q + + + +F+ ML S + PN T+
Sbjct: 254 GCYDDAQKVFDEMPSR----NVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTL 309
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
+ VL A G++ GR +H V + + I+ G+ LID Y+KCG L++A +FE R
Sbjct: 310 SSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLRE 369
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
KNV +W AMI + HG +++LF ML + NEVT I VLSAC+HGGLVE+G +
Sbjct: 370 KNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRL 429
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
F SMKER+ ++ +HYAC+VD+ R G + EA L+ ++PM TN++ GA C IH
Sbjct: 430 FLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHK 489
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
+L ++ + +L+N+ + W + +RK MK++ V K PG S +
Sbjct: 490 DYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWI 549
Query: 528 E---KRNEFV 534
E K +EF+
Sbjct: 550 EVKGKLHEFI 559
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 135/293 (46%), Gaps = 18/293 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN---DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L K++ +R G+ +H ++F + S LV +Y CG + A+ VFD++P+
Sbjct: 210 VLKATRKAEDVRFGRSIHGFYLEAGRVRCDVF-IGSSLVDMYGKCGCYDDAQKVFDEMPS 268
Query: 76 PNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
NV + W + + + F++ + F M + N+ T S VL AC + + +G+
Sbjct: 269 RNV--VTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGR 326
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+VH + E + +VG LID Y+KCG L A VF + E++V +WT+MI+G+
Sbjct: 327 RVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHG 386
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTW 252
AV LF M + PN+ T+ ++++ A G F M P +
Sbjct: 387 YAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHY 446
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
M+ F + EA L + M ++P N G L GS I ++
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERM---PMEPTNAV------WGALFGSCLIHKD 490
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 164/528 (31%), Positives = 270/528 (51%), Gaps = 40/528 (7%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNP 76
C++ C K K L GK+V + + + + ++ + LV +Y CGD+ +AR +FD+ N
Sbjct: 236 CVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANK 295
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N+ M N ++ + + M + R +K T + AC L D+ GK H
Sbjct: 296 NLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSH 355
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + G E ++ NA+IDMY KCG +A +VF M + VV
Sbjct: 356 AYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVV---------------- 399
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
T+N++IA R GD A+ F M DLV+WN MI
Sbjct: 400 -------------------TWNSLIAGLVRDGDMELAWRIFDEMLER----DLVSWNTMI 436
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
Q EA++LF+ M GI + VT+ G+ A G G++ + + + + + +H
Sbjct: 437 GALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIH 496
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+D+ G+AL+DM+S+CG A +F+ ++V++W A IG G + +IELF M
Sbjct: 497 VDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEM 556
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
LE+ ++ ++V +++L+ACSHGG V++G ++F SM++ +G++ HY C+VD+L R+G
Sbjct: 557 LEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGL 616
Query: 437 MVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
+ EA DL++ +P+ + + G+ C H +LA E+ ++ + V+LSNI
Sbjct: 617 LEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNI 676
Query: 497 CAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNESKA 544
A+ G+W + +R MKEK VQK PG S +E + E +ES A
Sbjct: 677 YASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHA 724
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 159/580 (27%), Positives = 254/580 (43%), Gaps = 92/580 (15%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVH------ALLC---TNDLNIFSLKSKLVGVYAG 59
N ++ N LL C K L++ KQ+H LLC ++LN S +G
Sbjct: 21 NPITRNSSSKLLVNC---KTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLES 77
Query: 60 CGDVNSARLVF--DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
++ AR F D ++FM N ++ A G +AI + M +K+TF
Sbjct: 78 ---LDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFP 134
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
+L AC +L + +G QVH +MG E D+ V N+LI Y++CG + R++F GM ER
Sbjct: 135 FLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLER 194
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT--------------------- 216
+VVSWTS+I+GY EAV LF +M G+EPN T
Sbjct: 195 NVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVC 254
Query: 217 --------------YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
NA++ Y + GD AA F + +LV +N ++S +
Sbjct: 255 SYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANK----NLVMYNTIMSNYVHH 310
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
+ ++ L + ML G +P+ VT+ + A G + +G+ HA V R GL
Sbjct: 311 EWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNIS 370
Query: 323 SALIDMYSKCGSLKDARTLFE-------IT------------------RI------KNVA 351
+A+IDMY KCG + A +FE +T RI +++
Sbjct: 371 NAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLV 430
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SWN MIG + M + +IELF M +G+ + VT++ + SAC + G ++ + +
Sbjct: 431 SWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYI 490
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
E+ + + + +VDM R G A + +++ ++ A + G +
Sbjct: 491 -EKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAI-GVMAMEGNTEG 548
Query: 472 AVTMGEEFFEMGLRKPDG--FVMLSNICAADGEWHEAENL 509
A+ + E E + KPD FV L C+ G + L
Sbjct: 549 AIELFNEMLEQKV-KPDDVVFVALLTACSHGGSVDQGRQL 587
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 179/566 (31%), Positives = 287/566 (50%), Gaps = 47/566 (8%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLC----TNDLNIFSLKSKLVGVY 57
+R+++ V C+L C R G++VHA + ++++ + L+ +Y
Sbjct: 184 HRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLN---ALMTMY 240
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
A CGDV +AR VFD + + N M+ G + F M + + N T +
Sbjct: 241 AKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTIT 300
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
V A L DI K++H +A + GF DV+ N+LI MY+ G++ AR VF M R
Sbjct: 301 SVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTR 360
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------- 217
D +SWT+MISGY D+A+ ++ M++ + P+ T
Sbjct: 361 DAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLH 420
Query: 218 ---------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
NA++ YA+ + A F M + D+V+W++MI+GF +
Sbjct: 421 ELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEK----DVVSWSSMIAGFCFN 476
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
R EAL F+ ML + +KPN+VT L A TG+++ G+EIHA V R G+ + +
Sbjct: 477 HRNFEALYYFRHML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLP 535
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+ALID+Y KCG A F K+V SWN MI + HG ++++ F +M++ G
Sbjct: 536 NALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGEC 595
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
+EVT +++L ACS GG+V +G E+F SM ++Y + + +HYAC+VD+L R G++ EAY+
Sbjct: 596 PDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYN 655
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
+ ++P+ ++ GA NGC IH +L + E+ V+L ++ A G
Sbjct: 656 FINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGI 715
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVE 528
W + +RK M+EK + G S VE
Sbjct: 716 WDKLARVRKTMREKGLDHDSGCSWVE 741
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 202/416 (48%), Gaps = 41/416 (9%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
G+ A VF K+P +VF N MV G +EA+ + M R + +TF VL
Sbjct: 143 GETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVL 202
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
++C G+ D + G++VHA + GF +V V NAL+ MY+KCG + +AR+VF M D +
Sbjct: 203 RSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCI 262
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------- 217
SW +MI+G+ + + + LF M + ++PN T
Sbjct: 263 SWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLA 322
Query: 218 ------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
N++I YA G A FSRM D ++W AMISG+ ++
Sbjct: 323 VKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTR----DAMSWTAMISGYEKNGFP 378
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
++AL+++ M V+ + P+++T+ L A GS+ +G ++H L G V +AL
Sbjct: 379 DKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNAL 438
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
++MY+K + A +F+ K+V SW++MI + + ++ F ML + ++ N
Sbjct: 439 LEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNS 497
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
VT I+ L+AC+ G + G EI + R G+ ++D+ + G+ A+
Sbjct: 498 VTFIAALAACAATGALRSGKEIHAHVL-RCGIAYEGYLPNALIDLYVKCGQTGYAW 552
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 276/539 (51%), Gaps = 39/539 (7%)
Query: 32 GKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G Q+ + + L N+FS S L+ VYA CG ++ AR VFD +P N N ++ A
Sbjct: 114 GAQLQSFAVKSGLVDNVFS-ASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYA 172
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
+ +A+ F M+ + TF+ +L G +Q+H + G +
Sbjct: 173 ESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLV 232
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE- 208
V NA I YS+CG +RR+F G+ RD++SW SM+ Y DEA+ F RM E
Sbjct: 233 VLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRES 292
Query: 209 GLEPNQFTYNAIIASYA------RRGDS-----------------NAAFAFFSRMTAEGF 245
G++P+ +++ ++++ + R+G S NA A ++R T
Sbjct: 293 GVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCM 352
Query: 246 V------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
+ D V+WN+M++G++ ++AL+ F+ M + + ++ L++
Sbjct: 353 MEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRS 412
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
+++GR++H+LV + G + F S+LI MYSKCG + DAR FE + W
Sbjct: 413 CSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPW 472
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
N+M+ Y +HG + +LF ML+ + + VT +++L+A SHGGLV++G EI SM+
Sbjct: 473 NSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMET 532
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAV 473
RY + + EHYAC VD+ R+G++ +A +L+ +P + C IHG +LA
Sbjct: 533 RYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELAS 592
Query: 474 TMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ F R+ +V+LS++ + G W + ++K+MK + + K PG+S +E +NE
Sbjct: 593 DVASHLFVAEPRQHSTYVLLSSMYSGRGMWSDRATVQKVMKNRGLSKVPGWSWIEVKNE 651
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 192/395 (48%), Gaps = 39/395 (9%)
Query: 52 KLVGVYAGCGD---VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+L+ Y+ G + +AR VFD+IP P+ N ++ A G ++A M
Sbjct: 31 QLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARG 90
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ F L++ + G Q+ + A + G ++V +AL+D+Y+KCG L AR
Sbjct: 91 LTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDAR 150
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY---- 224
RVF GM R+ VSW ++I+GY K +A+ LF M+ L P+ T+ A++A+
Sbjct: 151 RVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPS 210
Query: 225 ------------ARRGDS------NAAFAFFSRMTA--------EGFVP-DLVTWNAMIS 257
A+ G + NAA +S+ A +G DL++WN+M+
Sbjct: 211 WYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLG 270
Query: 258 GFAQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTG-SIQIGREIHALVCRMGL 315
+A ++EA++ F M+ SG++P+ + T V+ G + GR IH+LV ++GL
Sbjct: 271 AYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGL 330
Query: 316 HIDVFTGSALIDMYSKCGS---LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
+A+I MY++ ++DA F+ K+ SWN+M+ Y HG+ ++
Sbjct: 331 EGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRF 390
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
F M E + +E L + L +CS ++ G ++
Sbjct: 391 FRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQV 425
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALL-----CTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
L L C LR G+QVH+L+ +ND + S L+ +Y+ CG V AR F
Sbjct: 406 LSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDF----VSSSLIFMYSKCGMVGDARKSF 461
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV--GLLD 128
++ + N M+ A G Q FS M + + TF +L A GL+D
Sbjct: 462 EEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVD 521
Query: 129 IKKGKQV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMI 186
+G ++ +++ T+ + +D+Y + G L A+ + M F+ D + W +++
Sbjct: 522 --EGSEILNSMETRYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLL 579
Query: 187 SGYCNVS-----KVDEAVVLFERMKLEGLEPNQFTYNAIIAS-YARRG 228
G C + D A LF EP Q + +++S Y+ RG
Sbjct: 580 -GACRIHGNMELASDVASHLFV------AEPRQHSTYVLLSSMYSGRG 620
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 289/570 (50%), Gaps = 53/570 (9%)
Query: 20 LGKCMKSKALRQ----GKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
LG ++S A+ + G Q+ +L + L N+F+ S L+ VYA CG V AR VFD +
Sbjct: 96 LGSALRSAAVARRPAIGAQLQSLALKSGLANNVFA-ASALLDVYAKCGRVRDARQVFDGM 154
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG----LLDI 129
P N N ++ +G+ A+ F M ++ TF+ +L A G L+
Sbjct: 155 PERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTAVEGPSCFLM-- 212
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE-RDVVSWTSMISG 188
Q+H + G ++V NA I YS+CG L +RR+F G+ + RD++SW +M+
Sbjct: 213 ---HQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGA 269
Query: 189 YCNVSKVDEAVVLFERMKLE-GLEPNQFTYNAIIASYARRGDS----------------- 230
Y + DEA+ F RM E G+ P+ +++ +II+S + G
Sbjct: 270 YTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALE 329
Query: 231 ------NAAFAFFSR-----MTAEGF-------VPDLVTWNAMISGFAQSKRENEALKLF 272
NA A ++R M + + + D V+WN+M++G++Q +ALK F
Sbjct: 330 GVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFF 389
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
+ M ++ + + L++ +Q+G++IH LV G + F S+LI MYSK
Sbjct: 390 RCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKS 449
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G + DAR FE + WNAMI Y +HG ++ LF ML+ + +T + ++
Sbjct: 450 GIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLI 509
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
++CSH GLV++G EI +M+ +YGV + EHYAC VD+ R+G++ +A L+ +P
Sbjct: 510 TSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPD 569
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
+ C IHG +LA + F R+ +V+LS++ + G W + ++++
Sbjct: 570 AMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRV 629
Query: 513 MKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
MK++ + K PG+S +E +NE +++S
Sbjct: 630 MKKRGLSKVPGWSLIEVKNEVHSFNAEDKS 659
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 181/382 (47%), Gaps = 42/382 (10%)
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
+AR VFD++P + N ++ A A +G EA M N F L++
Sbjct: 45 AARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAA 104
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
G Q+ ++A + G N+V +AL+D+Y+KCG + AR+VF GM ER+ VSW +
Sbjct: 105 VARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNA 164
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------- 217
+I+GY + A+ LF M+ EGL P++ T+
Sbjct: 165 LIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGS 224
Query: 218 -------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
NA I +Y++ G + F + G + DL++WNAM+ + + ++EA+K
Sbjct: 225 ALGLTVLNAAITAYSQCGSLKDSRRIFDGI---GDIRDLISWNAMLGAYTHNGMDDEAMK 281
Query: 271 LFKGMLV-SGIKPNNVTVTGVLQAGGLTG-SIQIGREIHALVCRMGLHIDVFTGSALIDM 328
F M+ SG+ P+ + T ++ + G GR IH LV + L +ALI M
Sbjct: 282 FFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAM 341
Query: 329 YSKCGS---LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
Y++ ++DA F +K+ SWN+M+ Y +HG+ +++ F M E +R +E
Sbjct: 342 YTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDE 401
Query: 386 VTLISVLSACSHGGLVEKGLEI 407
+ L + S +++ G +I
Sbjct: 402 YAFSAALRSSSELAVLQLGKQI 423
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 153/314 (48%), Gaps = 45/314 (14%)
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGL--LCSARRVFHGMFERDVVSWTSMISGYCNVS 193
HA + GF N L+ YS+ L +ARRVF + RD VSW ++++ +
Sbjct: 14 HASLLKSGFAAPTP-WNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASG 72
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAII--ASYARR--------------GDSNAAFAFF 237
EA L M +GL N F + + A+ ARR G +N FA
Sbjct: 73 AHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAAS 132
Query: 238 --------------SRMTAEGFVP-DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+R +G + V+WNA+I+G+ +S AL+LF M G+ P
Sbjct: 133 ALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVP 192
Query: 283 NNVTVTGVLQAGGLTG-SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+ T +L A + G S + ++H + + G + + +A I YS+CGSLKD+R +
Sbjct: 193 DEATFASLLTA--VEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRI 250
Query: 342 FE-ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACS--- 396
F+ I I+++ SWNAM+G Y +GM D +++ F RM++E G+ + + S++S+CS
Sbjct: 251 FDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHG 310
Query: 397 ---HGGLVEKGLEI 407
H G V GL I
Sbjct: 311 HDDHQGRVIHGLVI 324
>gi|302799994|ref|XP_002981755.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
gi|300150587|gb|EFJ17237.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
Length = 673
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 173/592 (29%), Positives = 291/592 (49%), Gaps = 58/592 (9%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYA 58
M+ PI +V + L+ +C +L G+ +HA + + F L S LV +Y
Sbjct: 1 MDHSRLPI---TVPLYESLIRRCANPHSLEAGRSIHAHILRHGYGGERFLLNS-LVEMYC 56
Query: 59 GCGDVNSARLVFDKIPNPNV-FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
C + A VF+ + + F N ++ A+A G +E+I + M + N T
Sbjct: 57 KCDSLRDATAVFELVARERIAFPWNILIAANAQRGQSRESIALYRRMSCEGVKPNAITLV 116
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMG----FEN----DVSVGNALIDMYSKCGLLCSARR 169
VL AC L D+K G+++H G +E D + AL+ MY +CG + AR
Sbjct: 117 SVLGACANLEDLKTGREIHRSHVLGGRSRPYERPMPVDAVMATALVTMYGRCGSVADARA 176
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------ 217
VF G+ RD+ +W +M++ Y ++ +AV++ RM +EG+ P + T+
Sbjct: 177 VFEGICGRDLAAWNAMVAAYSRNGQMAQAVLVLRRMAVEGVRPGEGTFVGMLSWCCTVGA 236
Query: 218 -----------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
+++ Y R G A F R+ + D+V WNA
Sbjct: 237 LDEARSIHAHILATGLESRPTVGTTLVSMYGRCGSLGGAVCAFQRIRDK----DIVAWNA 292
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MI+ +AQS ++++++ M + G++ + VT+ GVL A R +HA + G
Sbjct: 293 MIAAYAQSGHSRDSIRIYHVMDLEGVRVDKVTLIGVLDACSSLALTSKTRLVHARIVDTG 352
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+ +DV G+AL++ Y++ G L DA +F +NVA+W+AM+ Y + G D S+E++
Sbjct: 353 VELDVVLGTALVNAYARGGHLVDADLVFAEMEERNVATWSAMVAAYAQTGHPDRSLEMYR 412
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
M +G+R N +T +S+L AC+H GL++ GL+ F SM YG++ +EH +C+VD+L RS
Sbjct: 413 EMQLQGLRPNYITYVSILFACNHAGLLDHGLDYFASMGRDYGIESCEEHCSCIVDLLGRS 472
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
GR+ EA L+ VP + S C HG + + F++ + +V LS
Sbjct: 473 GRLDEAEALMASVPYRLGISAWMCLLGACRTHGDVERGARVARRAFQVESGEVAPYVALS 532
Query: 495 NICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFVEKEVQNESK 543
N+ A G W E +R++M + K G S VE + +EF++ + + K
Sbjct: 533 NMYAGHGMWDEVSRVRQLMA-NTLDKSTGKSFVEIDGRLHEFIQGDETHPEK 583
>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22150, chloroplastic; Flags: Precursor
gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 820
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 270/522 (51%), Gaps = 52/522 (9%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN---------FQEAIGYF 101
S + +YA GD+ S+R VFD N+ + W M + N F EAIG
Sbjct: 255 SSAISMYAELGDIESSRRVFDSCVERNIEV--WNTMIGVYVQNDCLVESIELFLEAIG-- 310
Query: 102 SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC 161
+E + ++ T+ + A L ++ G+Q H ++ E + + N+L+ MYS+C
Sbjct: 311 --SKEIV--SDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRC 366
Query: 162 GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII 221
G + + VF M ERDVVSW +MIS + DE ++L M+ +G + + T A++
Sbjct: 367 GSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL 426
Query: 222 ASYARR-----GDSNAAFAFFSRMTAEGFVP---------------------------DL 249
++ + G AF + EG D
Sbjct: 427 SAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQ 486
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
TWN+MISG+ Q+ + +F+ ML I+PN VTV +L A GS+ +G+++H
Sbjct: 487 ATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGF 546
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
R L +VF SAL+DMYSK G++K A +F T+ +N ++ MI YG+HGM + +
Sbjct: 547 SIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERA 606
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
I LF M E G++ + +T ++VLSACS+ GL+++GL+IF M+E Y ++ S EHY C+ D
Sbjct: 607 ISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITD 666
Query: 430 MLCRSGRMVEAYDLLRQVPMYVT-NSMAGAFRNGCNIHGRRDLAVTMGEEF--FEMGLRK 486
ML R GR+ EAY+ ++ + + G+ C +HG +LA T+ E F+ G
Sbjct: 667 MLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNF 726
Query: 487 PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
V+LSN+ A + +W + +R+ M+EK ++K+ G S +E
Sbjct: 727 SGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIE 768
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 157/575 (27%), Positives = 260/575 (45%), Gaps = 82/575 (14%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDV- 63
P N L C ++K L+ GK VH L C + + + + L+ +Y C +
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRV-VHNSLMNMYVSCLNAP 159
Query: 64 -----NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI 118
+ R VFD + NV N ++ TG EA F +M + + +F
Sbjct: 160 DCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVN 219
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFE--NDVSVGNALIDMYSKCGLLCSARRVFHGMFE 176
V A IKK + + ++G E D+ V ++ I MY++ G + S+RRVF E
Sbjct: 220 VFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVE 279
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLF-ERMKLEGLEPNQFTY------------------ 217
R++ W +MI Y + E++ LF E + + + ++ TY
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ 339
Query: 218 -----------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
N+++ Y+R G + +F F M D+V+WN MIS F
Sbjct: 340 FHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRER----DVVSWNTMISAFV 395
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q+ ++E L L M G K + +TVT +L A + +IG++ HA + R G+ +
Sbjct: 396 QNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM 455
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRI--KNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
S LIDMYSK G ++ ++ LFE + ++ A+WN+MI Y ++G + + +F +MLE
Sbjct: 456 N-SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH------YACVVDMLC 432
+ +R N VT+ S+L ACS G V+ G K+ +G I + + +VDM
Sbjct: 515 QNIRPNAVTVASILPACSQIGSVDLG-------KQLHGFSIRQYLDQNVFVASALVDMYS 567
Query: 433 RSGRMVEAYDLLRQVP-----MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
++G + A D+ Q Y T + G HG + A+++ E G+ KP
Sbjct: 568 KAGAIKYAEDMFSQTKERNSVTYTTMIL------GYGQHGMGERAISLFLSMQESGI-KP 620
Query: 488 DG--FVMLSNICAADGEWHEAENLRKIMKE-KNVQ 519
D FV + + C+ G E + + M+E N+Q
Sbjct: 621 DAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQ 655
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 195/443 (44%), Gaps = 71/443 (16%)
Query: 48 SLKSKLVGVYAGCGDVNS--ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMR 105
S++S+L + C D N AR +FD IP P + N +++ EA+ ++S M+
Sbjct: 41 SIRSRLSKI---CQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMK 97
Query: 106 EF--IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC-- 161
+ C+ +T+S LKAC ++K GK VH + + V N+L++MY C
Sbjct: 98 KTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLN 157
Query: 162 GLLC----SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
C R+VF M ++VV+W ++IS Y + EA F M ++P+ ++
Sbjct: 158 APDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSF 217
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEG--FVPDLV------------------------- 250
+ + + A F+ M G +V DL
Sbjct: 218 VNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC 277
Query: 251 ------TWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIG 303
WN MI + Q+ E+++LF + S I + VT A +++G
Sbjct: 278 VERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELG 337
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
R+ H V + + + ++L+ MYS+CGS+ + +F R ++V SWN MI + ++
Sbjct: 338 RQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQN 397
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLEIFRSMK 412
G+ D + L M ++G + + +T+ ++LSA S H L+ +G++ F M
Sbjct: 398 GLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMN 456
Query: 413 ERYGVKISKEHYACVVDMLCRSG 435
+ ++DM +SG
Sbjct: 457 ------------SYLIDMYSKSG 467
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 6/278 (2%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGC 60
M + F I+ ++V LL + GKQ HA L + + S L+ +Y+
Sbjct: 410 MQKQGFKIDYITVT---ALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKS 466
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSI 118
G + ++ +F+ W M S +T G+ ++ F M E R N T +
Sbjct: 467 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVAS 526
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+L AC + + GKQ+H + + + +V V +AL+DMYSK G + A +F ER+
Sbjct: 527 ILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERN 586
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
V++T+MI GY + A+ LF M+ G++P+ T+ A++++ + G + F
Sbjct: 587 SVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFE 646
Query: 239 RM-TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
M P + + + R NEA + KG+
Sbjct: 647 EMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGL 684
>gi|242051244|ref|XP_002463366.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
gi|241926743|gb|EER99887.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
Length = 745
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 175/533 (32%), Positives = 285/533 (53%), Gaps = 44/533 (8%)
Query: 33 KQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
+Q+HAL + ++F + + LV Y+ G +++AR VF+++P ++ N +V A
Sbjct: 168 RQLHALASRAGIATDVF-VGNALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQ 226
Query: 91 TGNFQEAI--GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
G + + ++++ R ++ + V+ AC ++ G+Q+H A ++G E V
Sbjct: 227 DGECSAEVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHV 286
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
S+ N L+ MY KCG ARR+F M ERDV+SWT+++S ++AV LF M+ +
Sbjct: 287 SIANVLVAMYYKCGTPGCARRLFEFMGERDVISWTTVMS-----MDGEDAVSLFNGMRRD 341
Query: 209 GLEPNQFTYNAIIASY-----ARRG-------------DSNAA-------FAFFSRMTAE 243
G+ PN+ T+ A+++S AR G D AA +A RM
Sbjct: 342 GVAPNEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDA 401
Query: 244 GFV------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA--GG 295
+ +++ WNA+ISG+AQ++ +AL+ F M+ +KPN T +L A
Sbjct: 402 RMIFSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAMM-KIMKPNETTFASILSAVTAV 460
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
T S+ G+ H ++GL + ALIDMY+K GSL+++ F T +++ +W A
Sbjct: 461 ETVSMAYGQMYHCQALKLGLGASEYVSGALIDMYAKRGSLEESWKAFGETVHRSLIAWTA 520
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
+I KHG D+ + LF M+ G+ + V L+SVL+AC + G V G EIF SM ++
Sbjct: 521 IISANSKHGNYDAVVSLFNDMVGSGVAPDGVVLLSVLTACRYSGFVSLGREIFDSMAAKH 580
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTM 475
G ++ EHYACVVDML R+GR+ EA +L+ Q+P + S + C IHG D+ +
Sbjct: 581 GAELWPEHYACVVDMLGRAGRLEEAEELMLQMPSGPSVSALQSLLGACRIHGNTDVGERV 640
Query: 476 GEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
E + +V+LSNI A G+W +R+ M+E+ V+K+ GFS V+
Sbjct: 641 ASVLTETEPTESGAYVLLSNIYAEKGDWGAVARVRRQMRERGVKKEVGFSWVD 693
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 207/445 (46%), Gaps = 47/445 (10%)
Query: 91 TGNFQEAIGYFS-LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
T + +A+ + + ++R R + TF++ L G + +Q+HA+A++ G DV
Sbjct: 125 TPDPDDALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQLHALASRAGIATDVF 184
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV-LFERMKLE 208
VGNAL+ YS+ GL+ +AR+VF M RD+VSW +++ G + V+ +F RM +
Sbjct: 185 VGNALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGECSAEVIRVFLRMLKQ 244
Query: 209 G-LEPNQFTYNAIIASYARRGD---SNAAFAFFSRMTAEGFVP----------------- 247
G + P++ + ++I + G F ++ EG V
Sbjct: 245 GDVRPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIANVLVAMYYKCGTPGC 304
Query: 248 -----------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
D+++W ++S + +A+ LF GM G+ PN VT +L +
Sbjct: 305 ARRLFEFMGERDVISWTTVMSMDGE-----DAVSLFNGMRRDGVAPNEVTFVAMLSSMPG 359
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+ G+ IHA+ + L ++LI MY+K + DAR +F + + +WNA+
Sbjct: 360 DCPAREGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIFSLMPHSEIIAWNAL 419
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL-EIFRSMKERY 415
I Y ++ M ++E F M++ M+ NE T S+LSA + V +++ +
Sbjct: 420 ISGYAQNEMCQDALEAFLAMMKI-MKPNETTFASILSAVTAVETVSMAYGQMYHCQALKL 478
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG--AFRNGCNIHGRRDLAV 473
G+ S+ ++DM + G + E++ + V S+ A + + HG D V
Sbjct: 479 GLGASEYVSGALIDMYAKRGSLEESWKAFGET---VHRSLIAWTAIISANSKHGNYDAVV 535
Query: 474 TMGEEFFEMGLRKPDGFVMLSNICA 498
++ + G+ PDG V+LS + A
Sbjct: 536 SLFNDMVGSGV-APDGVVLLSVLTA 559
>gi|357445603|ref|XP_003593079.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360447|gb|ABN08457.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355482127|gb|AES63330.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 558
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 173/549 (31%), Positives = 283/549 (51%), Gaps = 52/549 (9%)
Query: 26 SKALRQGKQVHAL----LCTNDLNIF--SLKSKLVGVYAGCGDVNSARLVFDKIPN-PNV 78
+K + KQ+HAL L N + F L +++ A ++ A +FD +PN N
Sbjct: 20 AKNISHLKQIHALFLKHLPQNAPHHFFNRLLFRVLHFSAEKSNLYYAHKLFDTMPNCSNC 79
Query: 79 FMLNWMVMASAFTGN---FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
F+ W + AF + F I F+ M + + FTFS+VL AC + +GKQV
Sbjct: 80 FI--WTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTFSLVLNACGRVPAGFEGKQV 137
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA Q GF + V AL+DMY+KCG +C AR VF G+ +RDVV+WT+MI GY ++
Sbjct: 138 HARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICGYAKAGRM 197
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
+A LF+ M E N FT+ ++A YA GD AA + M + D VTW AM
Sbjct: 198 VDARFLFDNMG----ERNSFTWTTMVAGYANYGDMKAAMELYDVMNGK----DEVTWVAM 249
Query: 256 ISGF--------------------------------AQSKRENEALKLFKGMLVSGIKPN 283
I+G+ AQ+ EA+++++ M + IK
Sbjct: 250 IAGYGKLGNVSEARRIFDEITVPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVT 309
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+V + G + A I++ + + +ALI M SKCG++ A F
Sbjct: 310 DVAMVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFN 369
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
I R +++ +++AMI + +HG +I+LF +M +EG++ N+VT + VL+ACS GL+E+
Sbjct: 370 IMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNACSTSGLIEE 429
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
G F+ M E YG++ EHY C+VD+L R+G++ +AY L+++ + G+ C
Sbjct: 430 GCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAAC 489
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
++G +L FE+ +V+L+N A++ +W AE ++K+M +K ++K G
Sbjct: 490 RVYGNVELGEIAARHLFEIDPTDSGNYVLLANTYASNDKWECAEEVKKLMSKKGMKKPSG 549
Query: 524 FSRVEKRNE 532
+S +++ +
Sbjct: 550 YSWIQRETK 558
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 181/403 (44%), Gaps = 63/403 (15%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + A +GKQVHA L + L +++ L+ +YA CG V AR VFD I + +
Sbjct: 121 VLNACGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRD 180
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V M+ A G +A F M E N FT++ ++ D+K +++
Sbjct: 181 VVAWTAMICGYAKAGRMVDARFLFDNMGER----NSFTWTTMVAGYANYGDMKAAMELYD 236
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW-----TSMISGYCNV 192
V M +++V+ A+I Y K G + ARR+ F+ V W ++++ Y
Sbjct: 237 V---MNGKDEVT-WVAMIAGYGKLGNVSEARRI----FDEITVPWNPSTCAALLACYAQN 288
Query: 193 SKVDEAVVLFERMKLEGLE---------------------PNQFTY-------------- 217
EA+ ++E+M+ ++ N TY
Sbjct: 289 GHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHIVS 348
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
NA+I ++ G+ + A+ F+ M DL T++AMI+ FA+ + +A+ LF M
Sbjct: 349 NALIHMQSKCGNIDLAWREFNIMRNR----DLYTYSAMIAAFAEHGKSQDAIDLFLKMQQ 404
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM-GLHIDVFTGSALIDMYSKCGSLK 336
G+KPN VT GVL A +G I+ G ++ M G+ + ++D+ + G L+
Sbjct: 405 EGLKPNQVTFVGVLNACSTSGLIEEGCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLE 464
Query: 337 DARTLF-EITRIKNVASWNAMIGCYGKHGMVD----SSIELFE 374
A +L E + + +W +++ +G V+ ++ LFE
Sbjct: 465 KAYSLIKENSTSADATTWGSLLAACRVYGNVELGEIAARHLFE 507
>gi|414887716|tpg|DAA63730.1| TPA: hypothetical protein ZEAMMB73_596066 [Zea mays]
Length = 552
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 173/538 (32%), Positives = 278/538 (51%), Gaps = 39/538 (7%)
Query: 27 KALRQGK--QVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
A R G Q+HAL+ C++ + ++L+ + + A +F +P P +F
Sbjct: 13 SATRPGHLLQLHALMLKCSHFPHHAFPTARLIA--SPLAPLPYALSLFAAVPRPTLFHHT 70
Query: 83 WMVMASAFTGNFQEAIGYFSLM---REFIYRCNKFTFSIVLKACVGLLDIKK----GKQV 135
++ A + + S++ R + N+F F +L C + + + GKQV
Sbjct: 71 AILRALSSCPSATSLAASLSVLASARARLPELNEFAFQPLLALCAKIPNDAEAASIGKQV 130
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA+ Q GF + VS+ N L Y G + ARR+F M E+D VSW +MI GY NV V
Sbjct: 131 HALVLQYGFLDIVSLRNVLCHFYCSSGSMADARRMFAEMPEKDAVSWNTMIGGYVNVGDV 190
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIAS----------YARRG---DSNAAFAFFSRMTA 242
AV +F M+ G++ N +I A+ G D A A
Sbjct: 191 GTAVQMFTAMRWSGVDVNVTVVITLIGCGWQGESVHGFCAKAGLCDDVKVAAAMVRMYVR 250
Query: 243 EGFVP------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
EG + DLV N M G+A++ + EA+ L GM G++P++ T+ GV
Sbjct: 251 EGSIECASKVFHETARRDLVLCNCMADGYAKAGQIQEAMDLIGGMRQLGMRPSSGTLVGV 310
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A G +G++ GR +H L L +D G+A++DMY KCG +A +F+ R ++V
Sbjct: 311 LSACGASGALAAGRSVHELAEEARLELDSTLGTAIMDMYFKCGCPSEAAAVFDAIRDRDV 370
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+W AM+ +G +G S++ LF RM+E+G+ N VT +++L+ACSHGGLV++G E +
Sbjct: 371 KAWTAMVMGFGVNGQPGSAVSLFYRMMEDGVAPNGVTFLALLTACSHGGLVQEGKEFLET 430
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M +RYG+ S EHY+CV+D+L R+GR+ EAY+L+++V + + A C ++G
Sbjct: 431 MVQRYGISPSPEHYSCVIDLLGRAGRLHEAYELIQRVSSHGDATAWRALLAACRVYGNAK 490
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK-NVQKQPGFSRV 527
L + + +G P ++LSN A++G W E +R +K +V+K+ G S V
Sbjct: 491 LGRMVQAQLDAIGHYHPSDAILLSNTYASEGRWDEIAQVRDSETQKISVKKEAGCSSV 548
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 180/558 (32%), Positives = 283/558 (50%), Gaps = 46/558 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL + +LR G Q+HA L + L + L+ +YA CG ++ A VFD +P N
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 69
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V +++ G +E + F MR N+FT S LKAC G + G Q+H
Sbjct: 70 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHG 127
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
V + GFE V N+L+ MYSK ARRVF + R++ +W SMISGY + + +
Sbjct: 128 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 187
Query: 198 AVVLFERMKLEGLE-PNQFTYNAII----------------ASYARRGDSNAAFAFFSRM 240
++++F M+ E P++FT+ +++ A+ A RG S A+ A +
Sbjct: 188 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 247
Query: 241 TAEGFVP-----------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ +V + + W +I G AQ + EA+ LF+ SG++ +
Sbjct: 248 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRAD 307
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
++ V+ ++ G+++H + +DV ++L+DMY KCG +A F
Sbjct: 308 GHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFR 367
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+NV SW AMI GKHG +I+LFE M EEG+ A+EV +++LSACSH GLV++
Sbjct: 368 EMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDE 427
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
F + + ++ EHYAC+VD+L R+G + EA +L+ +PM T + + C
Sbjct: 428 CRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSAC 487
Query: 464 NIHGRRDLAV--TMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
+H +D+AV +G+ + P +VMLSNI A GEW E + +R M+ K ++KQ
Sbjct: 488 RVH--KDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQ 545
Query: 522 PGFSRVEKRNEFVEKEVQ 539
G S E V+KEV
Sbjct: 546 GGCSWTE-----VDKEVH 558
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 100/246 (40%), Gaps = 30/246 (12%)
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ +L+A S++ G ++HA + ++G D + LIDMY+KCG L A +F+
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS---------H 397
+NV SW A++ + HG + LF M G NE TL + L AC H
Sbjct: 67 ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIH 126
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
G V G E + V SK + +G +D++ + NSM
Sbjct: 127 GVCVRTGFEGHDVVANSLVVMYSKGRW---------TGDARRVFDVIPSRNLATWNSMIS 177
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLR---KPDGFVMLS--NICAADGEWHEAENLRKI 512
+ + GR L V F EM R +PD F S C+ G E +
Sbjct: 178 GYAHAGQ--GRDSLLV-----FREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAA 230
Query: 513 MKEKNV 518
M + V
Sbjct: 231 MAVRGV 236
>gi|449456490|ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 185/591 (31%), Positives = 293/591 (49%), Gaps = 74/591 (12%)
Query: 9 NNLSVN--YLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNS 65
NN+ +N LL C S +GKQ H L+ + L IF + S LV YA D++
Sbjct: 97 NNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDISG 156
Query: 66 ARLVFDKIPNPN----------------------VFM-------LNWMVMASAFT---GN 93
A+ VFD++ + N +FM + W M SA+ N
Sbjct: 157 AKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARSEHN 216
Query: 94 FQEAIGYFSLMR-EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGN 152
+ + F MR N+FTF V++AC + + GK VH + T+ GF D SV +
Sbjct: 217 CKRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCS 276
Query: 153 ALIDMYSKC-------------------------------GLLCSARRVFHGMFERDVVS 181
ALI Y +C G + A +F + E++ VS
Sbjct: 277 ALILFYCQCEAIDNAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVS 336
Query: 182 WTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT 241
+ M+ GY +++ + LFERM + N +I+ Y+R G+ + AF F +
Sbjct: 337 YNLMLKGYATSGRIEGSKRLFERMT----HKTTSSLNTMISVYSRNGEIDKAFKLFESVK 392
Query: 242 AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
+EG D VTWN+MISG Q+ + ALKL+ M + ++ + T + + QA IQ
Sbjct: 393 SEG---DPVTWNSMISGCIQNHQHEGALKLYITMCRTSVERSRSTFSALFQACTCLEYIQ 449
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
+G+ +H R +V+ G++LIDMY+KCGS+ DA+T F NVA++ A+I Y
Sbjct: 450 LGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCFPNVAAFTALINGYV 509
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
HG+ + +F+ ML+ + N TL+ +LSACS G+V++G+ +F SM++ YGV +
Sbjct: 510 HHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTVFHSMEKCYGVIPTL 569
Query: 422 EHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFE 481
EHYACVVD+L RSGR+ EA +R +P+ + GA N C +L ++ ++
Sbjct: 570 EHYACVVDLLGRSGRLYEAEAFIRCMPIEADRVIWGALLNACWFWMDLELGESVAKKVLS 629
Query: 482 MGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ + +++LSNI A G+W E N+R+ + V+K G S ++ N+
Sbjct: 630 LDPKAISAYIILSNIYAKLGKWVEKINVRRQLMSLKVKKIRGCSWIDVNNK 680
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 187/406 (46%), Gaps = 52/406 (12%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSI 118
G ++ A+ +F+++P +V ++W +M S ++ G + EA+ S M + N+ TFS
Sbjct: 51 GHLDLAQTLFNEMPVRSV--VSWNIMISGYSKFGKYSEALNLASEMHCNNVKLNETTFSS 108
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYS------------------- 159
+L C +GKQ H + + G + VG+AL+ Y+
Sbjct: 109 LLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDKN 168
Query: 160 ------------KCGLLCSARRVFHGMFERDVVSWTSMISGYC-NVSKVDEAVVLFERMK 206
KC L+ A +F + RDVV+WT+MIS Y + + LF M+
Sbjct: 169 DLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARSEHNCKRGLELFCSMR 228
Query: 207 LEG-LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
+ G +EPN+FT+++++ + R + +T GF D +A+I + Q +
Sbjct: 229 MNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAI 288
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
+ A ++ M +K +N + G++ AG + + +I C++ V + + +
Sbjct: 289 DNAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEI-------FCKLREKNPV-SYNLM 340
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
+ Y+ G ++ ++ LFE K +S N MI Y ++G +D + +LFE + EG +
Sbjct: 341 LKGYATSGRIEGSKRLFERMTHKTTSSLNTMISVYSRNGEIDKAFKLFESVKSEG---DP 397
Query: 386 VTLISVLSAC----SHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
VT S++S C H G ++ + + R+ ER S AC
Sbjct: 398 VTWNSMISGCIQNHQHEGALKLYITMCRTSVERSRSTFSALFQACT 443
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 10/208 (4%)
Query: 208 EGLE---PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
EGL N + N I+ + R G + A F+ M V +V+WN MISG+++ +
Sbjct: 28 EGLHTENSNIISTNIYISRHVRDGHLDLAQTLFNEMP----VRSVVSWNIMISGYSKFGK 83
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+EAL L M + +K N T + +L +G G++ H LV + GL I GSA
Sbjct: 84 YSEALNLASEMHCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSA 143
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+ Y+ + A+ +F+ KN W+ ++ Y K ++D +++LF ++ + A
Sbjct: 144 LVYFYANINDISGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVA- 202
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMK 412
T+IS + H ++GLE+F SM+
Sbjct: 203 WTTMISAYARSEHN--CKRGLELFCSMR 228
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 137/356 (38%), Gaps = 99/356 (27%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N I + + G L A+ +F+ M R VVSW MISGY K EA+ L M ++
Sbjct: 41 NIYISRHVRDGHLDLAQTLFNEMPVRSVVSWNIMISGYSKFGKYSEALNLASEMHCNNVK 100
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF----------------VPDL------ 249
N+ T++++++ A G S+ F + G + D+
Sbjct: 101 LNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDISGAKQV 160
Query: 250 ---------VTWNAMISGFAQSKRENEALKLFK--------------------------- 273
+ W+ ++ G+ + ++AL LF
Sbjct: 161 FDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARSEHNCKRG 220
Query: 274 -----GMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
M ++G ++PN T V++A G + G+ +H ++ + G H D SALI
Sbjct: 221 LELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALIL 280
Query: 328 MYSKC-------------------------------GSLKDARTLFEITRIKNVASWNAM 356
Y +C G + DA +F R KN S+N M
Sbjct: 281 FYCQCEAIDNAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLM 340
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
+ Y G ++ S LFERM + +L +++S S G ++K ++F S+K
Sbjct: 341 LKGYATSGRIEGSKRLFERMTHK----TTSSLNTMISVYSRNGEIDKAFKLFESVK 392
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 169/510 (33%), Positives = 261/510 (51%), Gaps = 42/510 (8%)
Query: 23 CMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
C S + K+VH A+ C + F L + L+ Y C V AR VFD + +V
Sbjct: 142 CGASGDASRVKEVHDDAIRCGMMSDAF-LGNALIHAYGKCKCVEGARRVFDDLVVKDV-- 198
Query: 81 LNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
++W M+S + G + + F M + N T S +L AC L D+K G+ +H
Sbjct: 199 VSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGF 258
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
A + G +V V +AL+ +Y++C + AR VF M RDVVSW
Sbjct: 259 AVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSW---------------- 302
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
N ++ +Y + + A FS+M+++G D TWNA+I G
Sbjct: 303 -------------------NGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGG 343
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
++ + +A+++ + M G KPN +T++ L A + S+++G+E+H V R L D
Sbjct: 344 CMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGD 403
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+ T +AL+ MY+KCG L +R +F++ K+V +WN MI HG + LFE ML+
Sbjct: 404 LTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQ 463
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
G++ N VT VLS CSH LVE+GL+IF SM + V+ HYAC+VD+ R+GR+
Sbjct: 464 SGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLH 523
Query: 439 EAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
EAY+ ++++PM T S GA C ++ +LA + FE+ P +V L NI
Sbjct: 524 EAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILV 583
Query: 499 ADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
W EA R +MKE+ + K PG S ++
Sbjct: 584 TAKLWSEASEARILMKERGITKTPGCSWLQ 613
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 22/334 (6%)
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+LKA + + D ++ +Q+ Q D + + LI ++ GL A R++ + R
Sbjct: 72 LLKAALNVGDFRRAQQLFDNIPQ----PDPTTCSTLISAFTTRGLPNEAIRLYASLRARG 127
Query: 179 VVSWTSM---ISGYC----NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
+ S+ ++ C + S+V E + + G+ + F NA+I +Y +
Sbjct: 128 IKPHNSVFLTVAKACGASGDASRVKE---VHDDAIRCGMMSDAFLGNALIHAYGKCKCVE 184
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A F + V D+V+W +M S + L +F M +G+KPN+VT++ +L
Sbjct: 185 GARRVFDDLV----VKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSIL 240
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A ++ GR IH R G+ +VF SAL+ +Y++C S+K AR +F++ ++V
Sbjct: 241 PACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVV 300
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SWN ++ Y + D + LF +M +G+ A+E T +V+ C G EK +E+ R M
Sbjct: 301 SWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKM 360
Query: 412 K----ERYGVKISKEHYACVVDMLCRSGRMVEAY 441
+ + + IS AC + R G+ V Y
Sbjct: 361 QNLGFKPNQITISSFLPACSILESLRMGKEVHCY 394
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 8/216 (3%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAG 59
M L F N ++++ L C ++LR GK+VH + + L + + LV +YA
Sbjct: 360 MQNLGFKPNQITIS---SFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAK 416
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
CGD+N +R VFD I +V N M++A+A GN +E + F M + + N TF+ V
Sbjct: 417 CGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGV 476
Query: 120 LKACVGLLDIKKGKQV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FER 177
L C +++G Q+ +++ E D + ++D++S+ G L A M E
Sbjct: 477 LSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEP 536
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN 213
+W +++ G C V K E + KL +EPN
Sbjct: 537 TASAWGALL-GACRVYKNVE-LAKISANKLFEIEPN 570
>gi|356510733|ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 649
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 285/550 (51%), Gaps = 57/550 (10%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
C S+ + +G+++ L+ D S + + G YA G ++ A +F+ +P N N
Sbjct: 113 CCGSRFVEEGRRLFELMPQRD--CVSWNTVISG-YAKNGRMDQALKLFNAMPEHNAVSYN 169
Query: 83 WMVMASAFTGNFQEAIGYFSLMREF-----------IYRCNKFTFSI-VLKACVGLLDIK 130
++ G+ + A+G+F M E + R + + +L+ C G D
Sbjct: 170 AVITGFLLNGDVESAVGFFRTMPEHDSTSLCALISGLVRNGELDLAAGILREC-GNGDDG 228
Query: 131 KGKQVHAVAT------QMG-------------------------FENDVSVGNALIDMYS 159
K VHA T Q G F +V N+++ Y
Sbjct: 229 KDDLVHAYNTLIAGYGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYV 288
Query: 160 KCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNA 219
K G + AR +F M ERD SW ++IS Y +S ++EA LF M P+ ++N+
Sbjct: 289 KAGDIVFARELFDRMVERDNCSWNTLISCYVQISNMEEASKLFREMP----SPDVLSWNS 344
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
II+ A++GD N A FF RM + +L++WN +I+G+ +++ A+KLF M + G
Sbjct: 345 IISGLAQKGDLNLAKDFFERMPHK----NLISWNTIIAGYEKNEDYKGAIKLFSEMQLEG 400
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+P+ T++ V+ + +G+++H LV + L D ++LI MYS+CG++ DA
Sbjct: 401 ERPDKHTLSSVISVSTGLVDLYLGKQLHQLVTKTVLP-DSPINNSLITMYSRCGAIVDAC 459
Query: 340 TLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
T+F EI K+V +WNAMIG Y HG ++ELF+ M + +T ISVL+AC+H
Sbjct: 460 TVFNEIKLYKDVITWNAMIGGYASHGSAAEALELFKLMKRLKIHPTYITFISVLNACAHA 519
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLVE+G F+SM YG++ EH+A +VD+L R G++ EA DL+ +P ++ GA
Sbjct: 520 GLVEEGWRQFKSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGA 579
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C +H +LA+ + + +V+L N+ A G+W +AE++R +M+EKNV
Sbjct: 580 LLGACRVHNNVELALVAADALIRLEPESSAPYVLLYNMYANLGQWDDAESVRVLMEEKNV 639
Query: 519 QKQPGFSRVE 528
+KQ G+S V+
Sbjct: 640 KKQAGYSWVD 649
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 168/396 (42%), Gaps = 82/396 (20%)
Query: 160 KCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNA 219
+ G + AR +F M RD V+W SMISGY ++ A LF+ M + ++N
Sbjct: 50 RSGRISEARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPRRDV----VSWNL 105
Query: 220 IIASYARRGDSNAAFAFFSRMTAEG-----FVP--DLVTWNAMISGFAQSKRENEALKLF 272
I++ Y SR EG +P D V+WN +ISG+A++ R ++ALKLF
Sbjct: 106 IVSGYFS--------CCGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLF 157
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI----HALVCRM--GL----HIDVFTG 322
M N +TG L G + ++ R + +C + GL +D+ G
Sbjct: 158 NAMPEHNAVSYNAVITGFLLNGDVESAVGFFRTMPEHDSTSLCALISGLVRNGELDLAAG 217
Query: 323 -------------------SALIDMYSKCGSLKDARTLFEITRI-------------KNV 350
+ LI Y + G +++AR LF++ +NV
Sbjct: 218 ILRECGNGDDGKDDLVHAYNTLIAGYGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNV 277
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SWN+M+ CY K G + + ELF+RM+E + TLIS S+ +E+ ++FR
Sbjct: 278 VSWNSMMMCYVKAGDIVFARELFDRMVERD-NCSWNTLISCYVQISN---MEEASKLFRE 333
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHG 467
M + + ++ L + G + A D ++P + N++ + + G
Sbjct: 334 MPSPDVLS-----WNSIISGLAQKGDLNLAKDFFERMPHKNLISWNTIIAGYEKNEDYKG 388
Query: 468 RRDLAVTMGEEFFEMGL--RKPDGFVMLSNICAADG 501
L F EM L +PD + S I + G
Sbjct: 389 AIKL-------FSEMQLEGERPDKHTLSSVISVSTG 417
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 165/518 (31%), Positives = 268/518 (51%), Gaps = 73/518 (14%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM--- 104
+ K+ ++ YA G + ARL+FD+I NPNV N ++ G +EA F M
Sbjct: 459 ATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK 518
Query: 105 ------------------REFI------YRCNKF----TFSIVLKACVGLLDIKKGKQVH 136
RE + +R +F+ L AC + D++ G+ +H
Sbjct: 519 NSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIH 578
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++A + G + + V N LI MY+KCG + VF + +D VSW S+ISG +D
Sbjct: 579 SLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLD 638
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
+A V+FE+M P + D+V+W A+I
Sbjct: 639 DARVVFEKM------PKR---------------------------------DVVSWTAII 659
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
S + Q+ AL LF ML GIKPN +TVT +L A G G+I++G + HAL+ ++G
Sbjct: 660 SAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFD 719
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA-MIGCYGKHGMVDSSIELFER 375
+F G++LI MY KCG +D +FE ++ +WNA ++GC ++G+ +I++FE+
Sbjct: 720 TFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGC-AQNGLGKEAIKIFEQ 777
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M EG+ ++++ + VL ACSH GLV++G F SM ++YG+ HY C+VD+L R+G
Sbjct: 778 MEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAG 837
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
+ EA L+ +P+ + + A C IH +L + E F+M K +V+LSN
Sbjct: 838 YLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSN 897
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
+ A+ G W + +RK+MK++ + K+PG S ++ +N+
Sbjct: 898 LFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKL 935
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 210/406 (51%), Gaps = 41/406 (10%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFS 102
N+ S S + G Y C ++ AR +FD++P N ++WMVM S + ++ EA F
Sbjct: 294 NVASWNSVVTG-YCHCYRMSEARELFDQMPERNS--VSWMVMISGYVHISDYWEAWDVFV 350
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M + R ++ F +VL A GL D++ + +A + G+E DV VG+A+++ Y++ G
Sbjct: 351 KMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNG 410
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL--------------- 207
L A F M ER+ SWT+MI+ + ++D+A+ L+ER+
Sbjct: 411 SLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQ 470
Query: 208 ------------EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
E L PN +NAIIA Y + G A F +M V + +W AM
Sbjct: 471 VGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMP----VKNSASWAAM 526
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
I+GF Q++ EAL+L + SG P++ + T L A G ++IGR IH+L + G
Sbjct: 527 IAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGC 586
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+ + + LI MY+KCG+++D +F R+K+ SWN++I ++ M+D + +FE+
Sbjct: 587 QFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEK 646
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
M + + V+ +++SA G E L++F M R G+K ++
Sbjct: 647 MPKRDV----VSWTAIISAYVQAGHGEVALDLFLDMLAR-GIKPNQ 687
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 195/438 (44%), Gaps = 57/438 (13%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
++ S S + G Y+ G V+ ARL+FD N+ ++ A G +EA F M
Sbjct: 201 DVVSWNSMING-YSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESM 259
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
E N +++ ++ V D+K +++ E +V+ N+++ Y C +
Sbjct: 260 TER----NVVSWNAMISGYVQNGDLKNARKLFDEMP----EKNVASWNSVVTGYCHCYRM 311
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------- 217
AR +F M ER+ VSW MISGY ++S EA +F +M P+Q +
Sbjct: 312 SEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAI 371
Query: 218 ----------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDL 249
+AI+ +Y R G + A FF M +
Sbjct: 372 TGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPER----NE 427
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
+W MI+ FAQ R ++A++L++ + + T T ++ A G IQ R I
Sbjct: 428 YSWTTMIAAFAQCGRLDDAIQLYERVPEQTV----ATKTAMMTAYAQVGRIQKARLIFDE 483
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
+ L+ +V +A+I Y++ G LK+A+ LF+ +KN ASW AMI + ++ +
Sbjct: 484 I----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREA 539
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+EL + G ++ + S LSAC++ G VE G + S+ + G + + ++
Sbjct: 540 LELLIELHRSGSVPSDSSFTSALSACANIGDVEIG-RVIHSLAIKTGCQFNSYVMNGLIS 598
Query: 430 MLCRSGRMVEAYDLLRQV 447
M + G + + + R +
Sbjct: 599 MYAKCGNVEDGSHVFRTI 616
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 164/365 (44%), Gaps = 73/365 (20%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE-------- 203
N I + G + ARRVF+ M +RDVVSW SMI+GY KVDEA +LF+
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234
Query: 204 ------------------RMKLEGL-EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEG 244
R E + E N ++NA+I+ Y + GD A F M +
Sbjct: 235 TWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEK- 293
Query: 245 FVPDLVTWNAMISGFAQSKRENEALKLFKGM----------LVSGI-------------- 280
++ +WN++++G+ R +EA +LF M ++SG
Sbjct: 294 ---NVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFV 350
Query: 281 -------KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
+P+ VL A +++ + + + G DV GSA+++ Y++ G
Sbjct: 351 KMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNG 410
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
SL A FE +N SW MI + + G +D +I+L+ER+ E+ + T ++++
Sbjct: 411 SLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTV----ATKTAMMT 466
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
A + G ++K IF + V + ++ ++G + EA DL +++P V N
Sbjct: 467 AYAQVGRIQKARLIFDEILNPNVVA-----WNAIIAGYTQNGMLKEAKDLFQKMP--VKN 519
Query: 454 SMAGA 458
S + A
Sbjct: 520 SASWA 524
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 30/156 (19%)
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+F + I + G +++AR +F ++V SWN+MI Y ++G VD + LF+ +
Sbjct: 171 LFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVG 230
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV-------------------KI 419
+ +R T +L+ + G +E+ E+F SM ER V K+
Sbjct: 231 KNIR----TWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKL 286
Query: 420 SKE-------HYACVVDMLCRSGRMVEAYDLLRQVP 448
E + VV C RM EA +L Q+P
Sbjct: 287 FDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMP 322
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 12/225 (5%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSAR 67
N L+V LL C A++ G+Q HAL+ + F + + L+ +Y CG
Sbjct: 686 NQLTVT---SLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGF 741
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VG 125
VF+++P ++ N +++ A G +EAI F M ++ +F VL AC G
Sbjct: 742 CVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAG 801
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTS 184
L+D + +++ + G V ++D+ + G L A + M + D V W +
Sbjct: 802 LVD-EGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEA 860
Query: 185 MISGYCNVSK-VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
++ G C + + V+ + ER+ + +P TY + +A +G
Sbjct: 861 LL-GACRIHRNVELGQRVAERL-FQMTKPKSATYVLLSNLFASQG 903
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 270/543 (49%), Gaps = 71/543 (13%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIG-YFSLMREFIYRCNKFTFSIVLKA 122
AR VFD+I N F +W ++ + N +QEA+ Y ++RE I + +T S VL A
Sbjct: 1 ARQVFDRIKQRNAF--SWSILVECYVQNAMYQEALEVYKEMVREEI-SIDAYTLSSVLAA 57
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE------ 176
C LLD+++G+ V A ++GFE DV V +LI +++KCG L A VF M
Sbjct: 58 CTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIIS 117
Query: 177 ------------------------RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEP 212
+DVVSW +MI+ Y +A LF RM G P
Sbjct: 118 VTAMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTP 177
Query: 213 NQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD------------------------ 248
+ +T+++I+ + A R+TA GF D
Sbjct: 178 DIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYF 237
Query: 249 -------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
L WN M++ +AQ + +AL L+K ML+ G P+ T + V+ + G+++
Sbjct: 238 YSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALR 297
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
G+ IH G DV G+AL++MY+KCGSL DA+ F+ K+V SW+AMI
Sbjct: 298 EGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASA 357
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
+HG + ++EL M +G+ NEVT SVL ACSHGG + +G++ F + + +G++ +
Sbjct: 358 QHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDE 417
Query: 422 EHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG--RRDLAVTMGEEF 479
E+ +D+L R+G + EA +L +P V+ GC +HG RR A T +
Sbjct: 418 ENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFT--KRI 475
Query: 480 FEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQ 539
+ P +V+L+N+ AA G W + LR+ M++K V++Q G S +E R++ E V
Sbjct: 476 VALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVG 535
Query: 540 NES 542
+ S
Sbjct: 536 DTS 538
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 152/330 (46%), Gaps = 34/330 (10%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ ++G Y CG + ++ +F + +V N M+ A G+ ++A F M +
Sbjct: 119 TAMIGAY--CGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHT 176
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ +TFS +L AC ++ G+ +H T GF+ D ++ N LI MY++CG L SARR
Sbjct: 177 PDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRY 236
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F+ + ++++ +W +M++ Y K +A+ L++ M LEG P++FT+++++ S A G
Sbjct: 237 FYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGAL 296
Query: 231 NAAFAFFSRMTAEGFV-------------------------------PDLVTWNAMISGF 259
T+ GF D+V+W+AMI+
Sbjct: 297 REGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAAS 356
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE-IHALVCRMGLHID 318
AQ EAL+L M + GI N VT + VL A G + G + L G+ D
Sbjct: 357 AQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERD 416
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIK 348
ID+ + G LK+A + K
Sbjct: 417 EENTVGFIDLLGRAGWLKEAEHVLHTMPFK 446
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 119/220 (54%), Gaps = 1/220 (0%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+LG C K L G+ +H + + F++++ L+ +Y CG + SAR F I
Sbjct: 185 ILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKKE 244
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ N M+ A A ++A+ + M + ++FTFS V+ +C L +++GK +H
Sbjct: 245 LGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHE 304
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+T GFE DV +G AL++MY+KCG L A++ F G+ +DVVSW++MI+ +E
Sbjct: 305 CSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEE 364
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
A+ L M L+G+ N+ T ++++ + + G +F
Sbjct: 365 ALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYF 404
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 169/550 (30%), Positives = 275/550 (50%), Gaps = 75/550 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCT-NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI---- 73
+L C ++AL GK+VH+ + + + + L+ +YA CGD A++VFD++
Sbjct: 151 VLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKD 210
Query: 74 ---------------------------PNPNVFMLNWMVMASAFTGNFQEAIGYFSLM-R 105
+P++ N ++ G A+ FS M +
Sbjct: 211 TSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLK 270
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
+ +KFT VL AC +K GKQ+HA + + +VGNALI MY+K G +
Sbjct: 271 SSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVE 330
Query: 166 SARRVFH--GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
A R+ G +V+++TS++ GY +
Sbjct: 331 VAHRIVEITGTPSLNVIAFTSLLDGYFKI------------------------------- 359
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
GD + A A F + D+V W AMI G+AQ+ ++AL LF+ M+ G KPN
Sbjct: 360 ----GDIDPARAIFDSLKHR----DVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPN 411
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF- 342
N T+ VL S+ G+++HA+ R+ V G+ALI MYS+ GS+KDAR +F
Sbjct: 412 NYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFN 471
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
I ++ +W +MI +HG+ + +IELFE+ML ++ + +T + VLSAC+H GLVE
Sbjct: 472 HICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVE 531
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G F MK + ++ + HYAC++D+L R+G + EAY+ +R +P+ G+ +
Sbjct: 532 QGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSS 591
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C +H DLA E+ + ++ L+N +A G+W +A +RK MK+K V+K+
Sbjct: 592 CRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQ 651
Query: 523 GFSRVEKRNE 532
GFS V+ +N+
Sbjct: 652 GFSWVQIKNK 661
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/534 (26%), Positives = 253/534 (47%), Gaps = 55/534 (10%)
Query: 17 DCLLGKCMKSKALRQGKQVHALLCTNDL-NIF----------------SLKSK-----LV 54
D +G+C+ ++ ++ G + + TN+L N++ LK+ ++
Sbjct: 27 DPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTIL 86
Query: 55 GVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKF 114
+A G+++SAR VFD+IP P+ M++ G F+ A+ F M +F
Sbjct: 87 SAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQF 146
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
TF+ VL +C + GK+VH+ ++G V V N+L++MY+KCG A+ VF M
Sbjct: 147 TFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRM 206
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
+D +W +MIS + + D A+ LF++M +P+ ++N+II Y +G A
Sbjct: 207 RLKDTSTWNTMISMHMQFCQFDLALALFDQMT----DPDIVSWNSIITGYCHQGYDIRAL 262
Query: 235 AFFSRM-TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG---- 289
FS M + PD T +++S A E+LKL K + ++ +V + G
Sbjct: 263 ETFSFMLKSSSLKPDKFTLGSVLSACAN----RESLKLGKQIHAHIVRA-DVDIAGAVGN 317
Query: 290 -VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
++ +G++++ I + L++ FT +L+D Y K G + AR +F+ + +
Sbjct: 318 ALISMYAKSGAVEVAHRIVEITGTPSLNVIAFT--SLLDGYFKIGDIDPARAIFDSLKHR 375
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+V +W AMI Y ++G++ ++ LF M+ EG + N TL +VLS S ++ G
Sbjct: 376 DVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHG---- 431
Query: 409 RSMKERYGVKISKEHYACV------VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
K+ + V I E + V + M RSG + +A + + Y +
Sbjct: 432 ---KQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILS 488
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMK 514
HG + A+ + E+ + L KPD +V + + C G + ++ +MK
Sbjct: 489 LAQHGLGNEAIELFEKMLRINL-KPDHITYVGVLSACTHVGLVEQGKSYFNLMK 541
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 173/557 (31%), Positives = 276/557 (49%), Gaps = 43/557 (7%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFD 71
N L LL + + G+ +HA + + L + LV +Y+ +NSA+ V
Sbjct: 7 NLLGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLS 66
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
V ++ F A+ +F+ MR + N FTF V KA +
Sbjct: 67 LTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMT 126
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GKQ+H +A + G DV VG + DMY K G A +F M +R++ +W + IS
Sbjct: 127 GKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQ 186
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY---------------------------------- 217
+ +A+V F+ EPN T+
Sbjct: 187 DRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSV 246
Query: 218 -NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
N +I Y + GD +A F+R+ G ++V+W +M++ Q+ E A +F
Sbjct: 247 ANGLIDFYGKCGDIVSAEMVFNRI---GNRKNVVSWCSMLAALVQNHEEERACMVFL-QA 302
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
++P + ++ VL A G +++GR +HAL + + ++F GSAL+DMY KCGS++
Sbjct: 303 RKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIE 362
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML--EEGMRANEVTLISVLSA 394
+A +F +N+ +WNAMIG Y G +D ++ LFE M G+R + VTLIS+LS
Sbjct: 363 NAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSV 422
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS 454
CS G VE+G++IF SM+ YG++ EH+ACVVD+L RSG + AY+ ++ + + T S
Sbjct: 423 CSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTIS 482
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMK 514
+ GA C +HG+ +L E+ FE+ V+LSN+ A+ G W EA +RK MK
Sbjct: 483 VWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMK 542
Query: 515 EKNVQKQPGFSRVEKRN 531
+ ++K G+S + +N
Sbjct: 543 DIGIKKNVGYSWIAVKN 559
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 272/532 (51%), Gaps = 48/532 (9%)
Query: 33 KQVHAL----LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
+Q H L T D+ F+++ +G A G++ +AR +FD++P+ + N ++
Sbjct: 32 RQFHPLSIKLFSTQDVYAFNVQ---IGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGY 88
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV------------------------ 124
G F E+ F LM N +++ ++ C+
Sbjct: 89 WKNGCFDESKRLFGLMPTK----NVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWN 144
Query: 125 ----GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
GL+ + ++ + +M N +S A++D Y+K G + AR +F+ M +++VV
Sbjct: 145 AMISGLVRYDRVEEASRLFEEMPRRNVISY-TAMVDGYAKIGEIEQARALFNCMPQKNVV 203
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
SWT MISGY K DEA LFE+M + N A+I Y + G ++ A F ++
Sbjct: 204 SWTVMISGYVENGKFDEAENLFEQMP----DKNIVAMTAMITGYCKEGKTDKAKILFDQI 259
Query: 241 TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI 300
DL +WNAMI+G+AQ+ EALKL ML G++P++ T+ VL A S+
Sbjct: 260 PCR----DLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASL 315
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY 360
Q GR+ H LV + G + +ALI MY KCGS+ D+ F +V SWNAMI +
Sbjct: 316 QEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAF 375
Query: 361 GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKIS 420
+HG D ++ F M + + +T +S+LSAC H G V + L F SM E Y +
Sbjct: 376 ARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPR 435
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF 480
EH+AC+VD+L R G++ +AY +++++P + GA C++H L ++
Sbjct: 436 PEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIV 495
Query: 481 EMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
E+ + +V+LSNI AA G W E +R +M+E+ V+KQP +S +E N+
Sbjct: 496 ELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNK 547
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 170/566 (30%), Positives = 288/566 (50%), Gaps = 47/566 (8%)
Query: 8 INNLSVNY----LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGD 62
+N L+++Y L +L + L GKQVH + + L+ S+ + LV +Y+ G
Sbjct: 895 MNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGC 954
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLK 121
AR VF+ + + ++ N M+ + A + +E++ F L+ E + + + FT + VL+
Sbjct: 955 AYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGL-KPDHFTLASVLR 1013
Query: 122 ACVGLLD-IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
AC L+D + +Q+H A + G D V LID+YSK G + A +F + D+
Sbjct: 1014 ACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLA 1073
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------- 217
W +M+ GY + +A+ LF + G + +Q T
Sbjct: 1074 CWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHA 1133
Query: 218 ------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
+ I+ Y + GD A F+ ++A PD V W +MISG + E
Sbjct: 1134 IKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISA----PDDVAWTSMISGCVDNGNE 1189
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
++AL+++ M S + P+ T +++A +++ GR++HA V ++ D F G++L
Sbjct: 1190 DQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSL 1249
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
+DMY+KCG+++DA LF+ ++N+A WNAM+ +HG + ++ LF+ M G+ +
Sbjct: 1250 VDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDR 1309
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
V+ I +LSACSH GL + E SM YG++ EHY+C+VD L R+G + EA ++
Sbjct: 1310 VSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIE 1369
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
+P + S+ A C I G + + F + +V+LSNI AA W +
Sbjct: 1370 TMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDD 1429
Query: 506 AENLRKIMKEKNVQKQPGFSRVEKRN 531
+ RK+MK KNV+K PGFS ++ +N
Sbjct: 1430 VTDARKMMKRKNVKKDPGFSWIDVKN 1455
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 225/444 (50%), Gaps = 29/444 (6%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
+++ + LLGKC ++ + G L N L+ +Y+ CG ++SAR VFD
Sbjct: 631 AISTHNLLLGKCTHARIVVSGSAGDHFLSNN----------LLTMYSKCGSLSSARQVFD 680
Query: 72 KIPNPNVFMLNWMVMASAFT-----GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
P ++ N ++ A A + GN QE + F L+R + + T + VLK C+
Sbjct: 681 TTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNS 740
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
+ + VH A ++G E DV V AL+++YSKCG + AR +F M ERDVV W M+
Sbjct: 741 GCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMML 800
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR------RGDSNAAFAFFSRM 240
GY + EA LF GL P++F+ I+ + + ++ A+ +++
Sbjct: 801 KGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKL 860
Query: 241 TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI 300
+ PD+ WN +S + A++ F M I + VT+ VL A T +
Sbjct: 861 SLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDL 920
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY 360
++G+++H + + GL DV ++L++MYSK G AR +F + ++ SWN+MI
Sbjct: 921 ELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSC 980
Query: 361 GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK-- 418
+ + + S+ LF +L EG++ + TL SVL ACS L++ GL I R + + +K
Sbjct: 981 AQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACS--SLID-GLNISRQI-HVHALKTG 1036
Query: 419 -ISKEHYA-CVVDMLCRSGRMVEA 440
I+ A ++D+ +SG+M EA
Sbjct: 1037 NIADSFVATTLIDVYSKSGKMEEA 1060
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 209/441 (47%), Gaps = 25/441 (5%)
Query: 16 LDCLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L +L C+ S L + VH A+ + ++F + LV +Y+ CG + ARL+FD +
Sbjct: 730 LAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF-VSGALVNIYSKCGRMRDARLLFDWM 788
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+V + N M+ G +EA FS R ++F+ ++L V ++ +GK
Sbjct: 789 RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNG-VSEVNWDEGK 847
Query: 134 ----QVHAVATQMGFENDVSVGNALIDMYSKC---GLLCSARRVFHGM----FERDVVSW 182
QV A A ++ +D S+C G A F M + D V+
Sbjct: 848 WLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTL 907
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA 242
+++ ++ + GL+ + N+++ Y++ G + A F+ M
Sbjct: 908 LVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKH 967
Query: 243 EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA-GGLTGSIQ 301
DL++WN+MIS AQS E E++ LF +L G+KP++ T+ VL+A L +
Sbjct: 968 ----LDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLN 1023
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY- 360
I R+IH + G D F + LID+YSK G +++A LF+ ++A WNAM+ Y
Sbjct: 1024 ISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYI 1083
Query: 361 -GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
G G ++ELF + + G +++++TL + AC L+++G +I + + G
Sbjct: 1084 IGNDGK--KALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQI-HAHAIKAGFDS 1140
Query: 420 SKEHYACVVDMLCRSGRMVEA 440
+ ++DM + G MV A
Sbjct: 1141 DLHVNSGILDMYIKCGDMVNA 1161
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 162/518 (31%), Positives = 267/518 (51%), Gaps = 45/518 (8%)
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIV 119
D+ SAR+VFDK+ + N ++ W +M + ++ G +A+ F + Y +KFT + +
Sbjct: 197 DIQSARMVFDKMQHKN--LVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSL 254
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
L ACV L GKQ+H+ + G +DV VG L+DMY+K + ++R++F+ M +V
Sbjct: 255 LSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNV 314
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------------- 217
+SWT++ISGY + EA+ LF M + PN FT+
Sbjct: 315 MSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQ 374
Query: 218 -------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
N++I YAR G A F+ + F +L+++N A++
Sbjct: 375 TIKLGLSTINCVGNSLINMYARSGTMECARKAFNIL----FEKNLISYNTAADANAKALD 430
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+E+ + +G+ + T +L G+I G +IHAL+ + G ++ +A
Sbjct: 431 SDESFN--HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNA 488
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
LI MYSKCG+ + A +F +NV +W ++I + KHG ++ELF MLE G++ N
Sbjct: 489 LISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPN 548
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
EVT I+VLSACSH GL+++ + F SM + + EHYAC+VD+L RSG ++EA + +
Sbjct: 549 EVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFI 608
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+P + F C +H L ++ E P +++LSN+ A++G W
Sbjct: 609 NSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWD 668
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
+ LRK MK+K + K+ G+S +E N+ + V + S
Sbjct: 669 DVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTS 706
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 257/542 (47%), Gaps = 72/542 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C++S L GK +H L + L + S L + L+ +Y+ CGD +A +F + +
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLM------REFIYRCNKFTFSIVLKACVGLLDIKK 131
+++W + S F N E+ + + R IY N++ F+ +L++C L
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYP-NEYCFTALLRSCSNPLFFTT 163
Query: 132 GKQVHAVATQMG-FENDVSVGNALIDMYSKCGL-LCSARRVFHGMFERDVVSWTSMISGY 189
G + A + G F++ V VG ALIDM++K GL + SAR VF M +++V+WT MI+ Y
Sbjct: 164 GLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRY 223
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-----YARRGDSNAAFAFFSRMTAEG 244
+ +D+AV LF R+ + P++FT +++++ + G ++ S + ++
Sbjct: 224 SQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDV 283
Query: 245 FV--------------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
FV ++++W A+ISG+ QS++E EA+KLF ML
Sbjct: 284 FVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHG 343
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+ PN T + VL+A IG+++H ++GL G++LI+MY++ G+++ A
Sbjct: 344 HVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECA 403
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
R F I KN+ S+N K +DS + G+ A+ T +LS +
Sbjct: 404 RKAFNILFEKNLISYNTAADANAK--ALDSDESFNHEVEHTGVGASPFTYACLLSGAACI 461
Query: 399 GLVEKGLEIFRSM-KERYGVKISKEHYACVVDMLCRSGRMVEAYDLL--RQVPMYVTNSM 455
G + KG +I + K +G LC + ++ Y ++ + V N M
Sbjct: 462 GTIVKGEQIHALIVKSGFGTN------------LCINNALISMYSKCGNKEAALQVFNDM 509
Query: 456 AGAFRN---------GCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWH 504
+RN G HG A+ + E E+G+ KP+ ++ + + C+ G
Sbjct: 510 --GYRNVITWTSIISGFAKHGFATKALELFYEMLEIGV-KPNEVTYIAVLSACSHVGLID 566
Query: 505 EA 506
EA
Sbjct: 567 EA 568
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 184/389 (47%), Gaps = 54/389 (13%)
Query: 117 SIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-- 174
S++LKAC+ +++ GK +H G D + N+LI +YSKCG +A +F M
Sbjct: 43 SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERM---KLEGLEPNQFTYNAIIASYARRGDSN 231
+RD+VSW+++IS + N S A++ F M + PN++ + A++ S +
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162
Query: 232 AAFAFFSRMTAEGFV---------------------------------PDLVTWNAMISG 258
A F+ + G+ +LVTW MI+
Sbjct: 163 TGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITR 222
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
++Q ++A+ LF +LVS P+ T+T +L A +G+++H+ V R GL D
Sbjct: 223 YSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASD 282
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
VF G L+DMY+K +++++R +F NV SW A+I Y + +I+LF ML
Sbjct: 283 VFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLH 342
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG--VKISKEHYACV----VDMLC 432
+ N T SVL AC+ L F K+ +G +K+ CV ++M
Sbjct: 343 GHVTPNCFTFSSVLKACA-------SLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYA 395
Query: 433 RSGRMV---EAYDLLRQVPMYVTNSMAGA 458
RSG M +A+++L + + N+ A A
Sbjct: 396 RSGTMECARKAFNILFEKNLISYNTAADA 424
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 158/325 (48%), Gaps = 48/325 (14%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L LL C++ + GKQ+H+ + + L ++F + LV +YA V ++R +F+ +
Sbjct: 251 LTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF-VGCTLVDMYAKSAAVENSRKIFNTM 309
Query: 74 PNPNVFMLNWMVMASAFTGNFQE--AIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+ NV ++W + S + + QE AI F M N FTFS VLKAC L D
Sbjct: 310 LHHNV--MSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGI 367
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GKQ+H ++G VGN+LI+MY++ G + AR+ F+ +FE++++S+ + N
Sbjct: 368 GKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADA--N 425
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY---------------------------------- 217
+D ++ G+ + FTY
Sbjct: 426 AKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCI 485
Query: 218 -NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
NA+I+ Y++ G+ AA F+ M G+ +++TW ++ISGFA+ +AL+LF ML
Sbjct: 486 NNALISMYSKCGNKEAALQVFNDM---GY-RNVITWTSIISGFAKHGFATKALELFYEML 541
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQ 301
G+KPN VT VL A G I
Sbjct: 542 EIGVKPNEVTYIAVLSACSHVGLID 566
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 172/536 (32%), Positives = 274/536 (51%), Gaps = 46/536 (8%)
Query: 34 QVHALLCTNDL----NIF-------SLKSKLVGVYAGCGDVNSARLVFDKIPN-PNVFML 81
Q+HA + N L N+F S + L +Y + AR +FD P+ + F+
Sbjct: 170 QIHAFMLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRDDAFLC 229
Query: 82 NWMVMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVAT 140
N M+ A + E+ Y L R + + FTFS++ K+C + I +G+++H+
Sbjct: 230 NSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVV 289
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+GF D+ AL+DMY+K G + AR++F M +R VSWT++I GY +D A
Sbjct: 290 AVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGK 349
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP------------- 247
LF++M +E + +N +I +Y + GD +A F M V
Sbjct: 350 LFDQM----IEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGN 405
Query: 248 --------------DLVTWNAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQ 292
+L +WNAMISG+ Q+K+ EALKLF M + ++P+ VT+ VL
Sbjct: 406 LDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLP 465
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A G++ +G +H V R L G+ALIDMY+KCG + +R +F+ K AS
Sbjct: 466 AIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETAS 525
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
WNA+I + +G ++ LF M +G NE+T+I VLSAC+H GLVE+G F++M+
Sbjct: 526 WNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAME 585
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLA 472
E +G+ EHY C+VD+L R+G + EA L+ +P + +F C A
Sbjct: 586 E-FGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARA 644
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ +E +M ++ML N+ A + W EA+ ++ +M+ V+K+ G S +E
Sbjct: 645 ERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIE 700
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 156/561 (27%), Positives = 283/561 (50%), Gaps = 42/561 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C+ + L+ GK V + +L++F + + L+ +YA C A VF ++
Sbjct: 267 ILDACVNPETLQHGKHVRESISETSFELDLF-VGTALITMYARCRSPEDAAQVFGRMKQT 325
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N+ + ++ A A G+ EA+ YF +M++ N+ TF +L +++ ++H
Sbjct: 326 NLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIH 385
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ T+ G ++ ++ NAL+++Y +C AR VF + +++SW SMI Y + D
Sbjct: 386 LLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHD 445
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
+A+ LF M+ +G++P++ + I+ +
Sbjct: 446 DALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLV 505
Query: 224 --YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ G+ + A M + + WN +I+G+A R EAL+ ++ + + I
Sbjct: 506 NMYAKAGELDVAEVILQEMDEQ----QITAWNVLINGYALHGRSREALEAYQKLQLEAIP 561
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+ VT VL A + S+ G+ IH+ GL DV +AL +MYSKCGS+++AR +
Sbjct: 562 VDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRI 621
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ I++ SWN M+ Y +HG + ++L +M +EG++ N +T +SVLS+CSH GL+
Sbjct: 622 FDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLI 681
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
+G + F S+ G+++ EHY C+VD+L R+G++ EA + ++P+ +
Sbjct: 682 AEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLG 741
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C + D + E+ V+LSNI + G+W A LR+ M + V+K
Sbjct: 742 ACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKV 801
Query: 522 PGFSRVEKRNEFVEKEVQNES 542
PG S ++ +N+ E V++ S
Sbjct: 802 PGISSIQVKNKVHEFRVRDTS 822
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 145/493 (29%), Positives = 228/493 (46%), Gaps = 49/493 (9%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C + LR G VHAL +L + L+ +Y CG + A+ VF+++
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 75 NPNVFMLNWMVMASAFTGN-FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
NV N M+ + G ++ A+ F+ M + N TF VL + V ++KGK
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+H+ + DV V AL++ Y+KCG L AR+VF GM R V +W SMIS Y
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240
Query: 194 KVDEAVVLFERMKLEG-----------------------------------LEPNQFTYN 218
+ EA +F+RM+ EG E + F
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGT 300
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
A+I YAR A F RM +L+TW+A+I+ FA EAL+ F+ M
Sbjct: 301 ALITMYARCRSPEDAAQVFGRMKQ----TNLITWSAIITAFADHGHCGEALRYFRMMQQE 356
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
GI PN VT +L ++ IH L+ GL +AL+++Y +C S DA
Sbjct: 357 GILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDA 416
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC--- 395
RT+F+ + N+ SWN+MIG Y + D +++LF M ++G++ + V +++L AC
Sbjct: 417 RTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIG 476
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SHG + ++ E G+ S +V+M ++G + A +L+++ +
Sbjct: 477 SHG----RTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAW 532
Query: 456 AGAFRNGCNIHGR 468
NG +HGR
Sbjct: 533 -NVLINGYALHGR 544
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 186/389 (47%), Gaps = 48/389 (12%)
Query: 56 VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTG--NFQEAIGYFSLMREFIYRCNK 113
+Y+ CG + A F KI NV ++W VM SA++ +FQEA+ F M N
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNV--VSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNA 58
Query: 114 FTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
T VL +C +++ G VHA++ + GF + V AL++MY KCG L A+ VF
Sbjct: 59 ITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEE 118
Query: 174 MFERDVVSWTSMISGYCNVSKVDE-AVVLFERMKLEGLEPNQFTY--------------- 217
M E++VV+W +M+ Y + AV LF RM LEG++ N T+
Sbjct: 119 MAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRK 178
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
A++ +Y + G A F M + TWN+MIS
Sbjct: 179 GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRS----VGTWNSMIS 234
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
++ S+R EA +F+ M G + + VT +L A ++Q G+ + + +
Sbjct: 235 AYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFEL 294
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
D+F G+ALI MY++C S +DA +F + N+ +W+A+I + HG ++ F M
Sbjct: 295 DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQ 354
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLE 406
+EG+ N VT IS+L+ G GLE
Sbjct: 355 QEGILPNRVTFISLLN----GFTTPSGLE 379
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 129/246 (52%), Gaps = 21/246 (8%)
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
Y+R G A A F ++ A ++V+WN MIS ++ K EAL LF ML+ G+ PN
Sbjct: 2 YSRCGSLGDAVAAFGKIRAR----NVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPN 57
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+T+ VL + G ++ G +HAL G + +AL++MY KCG+L DA+++FE
Sbjct: 58 AITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFE 117
Query: 344 ITRIKNVASWNAMIGCYGKHGMV-DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
KNV +WNAM+G Y G ++ELF RML EG++AN +T ++VL++ +
Sbjct: 118 EMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALR 177
Query: 403 KGLEIFRSMKERYGVKISKEHY------ACVVDMLCRSGRMVEAYDLLRQVP---MYVTN 453
KG I ++E EH +V+ + G + +A + +P + N
Sbjct: 178 KGKFIHSCVRE-------SEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWN 230
Query: 454 SMAGAF 459
SM A+
Sbjct: 231 SMISAY 236
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 159/334 (47%), Gaps = 13/334 (3%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFD 71
VN++ +LG C R K VH + + L L ++ LV +YA G+++ A ++
Sbjct: 464 VNFM-TILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQ 522
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
++ + N ++ A G +EA+ + ++ +K TF VL AC + +
Sbjct: 523 EMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAE 582
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GK +H+ A + G ++DV V NAL +MYSKCG + +ARR+F M R VSW M+ Y
Sbjct: 583 GKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQ 642
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLV 250
+ +E + L +M+ EG++ N T+ ++++S + G +F + + G
Sbjct: 643 HGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTE 702
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
+ ++ ++ + EA K M ++P VT +L A + + G+ L
Sbjct: 703 HYGCLVDLLGRAGKLQEAEKYISKM---PLEPGIVTWASLLGACRVQKDLDRGK----LA 755
Query: 311 CRMGLHIDVFTGSA---LIDMYSKCGSLKDARTL 341
L +D SA L ++YS+ G K+A L
Sbjct: 756 AGKLLELDPGNSSASVVLSNIYSERGDWKNAAKL 789
>gi|222622633|gb|EEE56765.1| hypothetical protein OsJ_06312 [Oryza sativa Japonica Group]
Length = 836
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 167/533 (31%), Positives = 277/533 (51%), Gaps = 50/533 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C + LR G +VH + + L SL + LV Y+ C ++A F I N
Sbjct: 275 LLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITIQNK 334
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQ 134
+ ++W + SA + +F L+ E + ++ +L IK ++
Sbjct: 335 DS--VSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIRMSTFCGIKMVQE 392
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H + ++G+ D SV NA++D Y+KCG L A +F + R++V+ +MIS Y +
Sbjct: 393 SHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNC 452
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
V++A + F M AE DL TWN
Sbjct: 453 VEDAEMTFNHM------------------------------------AE---KDLTTWNL 473
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M +AQ+ ++A LF + G+ P+ +++T +L A S+Q+ ++ H + R
Sbjct: 474 MSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRAS 533
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L D+ AL+D YSKCG++ +A LF+++ K++ + AMIG Y HGM + ++ELF
Sbjct: 534 LE-DIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFS 592
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
+ML ++ + V L ++LSACSH GLV+ G++IF+S++E YGV+ ++EH AC+VD+L RS
Sbjct: 593 KMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARS 652
Query: 435 GRMVEAYDLLRQVPMYVTNSMA-GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
GR+ +AY +P +V N+ A G+ C +HG + + F M +V++
Sbjct: 653 GRLQDAYSFALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVIM 712
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFVEKEVQNESK 543
SNI AAD +W E++RK+MK K+++K G S +E R+ FV +VQ++ +
Sbjct: 713 SNIFAADDKWESVEHVRKLMKSKDMKKPAGCSWIEVEKTRHLFVASDVQHQDR 765
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 141/554 (25%), Positives = 244/554 (44%), Gaps = 84/554 (15%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGD---VNSARLVFDKIP 74
+L C K + LR G+ +H + L +L + LV +YA CG ++ A L F I
Sbjct: 69 VLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTIC 128
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK--G 132
+V N ++ + G F+EA+ F M N T + VL C L++ + G
Sbjct: 129 CKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFC-SLVEYGRHYG 187
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
K++H + G E D+SV NAL+ YSK + + +F D+V+W ++I+GY
Sbjct: 188 KEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMN 247
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------- 229
A+ LF+ + G+ P+ + +++ + A+ G+
Sbjct: 248 RYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSL 307
Query: 230 SNAAFAFFS---RMTA--EGFVP----DLVTWNAMISGFAQSKRENEA-LKLFKGMLVSG 279
NA +F+S R A F+ D V+WNA++S A S+ E +L M
Sbjct: 308 MNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWHDV 367
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ ++VT+ +++ G I++ +E H R+G D +A++D Y+KCG L DA
Sbjct: 368 TQWDSVTILNIIRMSTFCG-IKMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAE 426
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMV-------------------------------DS 368
TLF +N+ + N MI CY K+ V D
Sbjct: 427 TLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQ 486
Query: 369 SIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
+ LF ++ EG+ + +++ ++LSAC H V+ + M I E ++
Sbjct: 487 AFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASLEDIHLE--GALL 544
Query: 429 DMLCRSGRMVEAYDLLRQVPMY----VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
D + G + AY+L QV ++ + +M GA+ +HG + AV + + + +
Sbjct: 545 DAYSKCGNIANAYNLF-QVSLHKDLVIFTAMIGAYA----MHGMAEKAVELFSKMLTLDI 599
Query: 485 RKPDGFVMLSNICA 498
KPD V+ + + A
Sbjct: 600 -KPDHVVLTALLSA 612
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 202/458 (44%), Gaps = 58/458 (12%)
Query: 56 VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR----- 110
+Y G + A VFD++ + N ++ AS+ G + + F L R +
Sbjct: 3 MYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDV---FHLFRAMLASGVDES 59
Query: 111 -CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG---LLCS 166
T ++VL C L ++ G+ +H + G E D GNAL+ MY+KCG +
Sbjct: 60 MPTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDD 119
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA---- 222
A F + +DVVSW S+I+GY +EA+ LF +M E PN T ++
Sbjct: 120 AHLAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSL 179
Query: 223 -SYARR------------------GDSNAAFAFFSRMTAEGFVP---------DLVTWNA 254
Y R SNA A +S++ V D+VTWN
Sbjct: 180 VEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNT 239
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
+I+G+ ++ + ALKLF+G+L +G+ P++V++ +L A G++++G +H + R
Sbjct: 240 VIAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFR-- 297
Query: 315 LHIDVFTGS----ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI-GCYGKHGMVDSS 369
H ++ + AL+ YS+C A F + K+ SWNA++ C ++
Sbjct: 298 -HPELLQETSLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQF 356
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
L M + + + VT+++++ + G+ K ++ R G ++D
Sbjct: 357 FRLLGEMWHDVTQWDSVTILNIIRMSTFCGI--KMVQESHGYSLRVGYTGDSSVANAILD 414
Query: 430 MLCRSGRMVEAYDLLRQVP---MYVTNSMAGAF-RNGC 463
+ G + +A L R + + N+M + +N C
Sbjct: 415 AYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNC 452
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 14/95 (14%)
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR--- 382
+DMY + GSL DA T+F+ + N +I + G+ + LF ML G+
Sbjct: 1 MDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESM 60
Query: 383 ANEVTLISVLSACS-----------HGGLVEKGLE 406
VT+ VL C+ HG +++ GLE
Sbjct: 61 PTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLE 95
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 289/552 (52%), Gaps = 48/552 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + L G+++HA L C + NI + L+ +YA CG V+SA VF +I +
Sbjct: 271 VLQVCAELAQLNHGRELHAALLKCGTEFNIQC--NALLVMYARCGWVDSALRVFREIGDK 328
Query: 77 NVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ ++W M S + N + EAI +F M + + + +L A L + G++
Sbjct: 329 D--YISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGRE 386
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKC-GLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VHA A + ++D+ + N L+DMY KC + CSA RVF M +D VSWT++I+ Y S
Sbjct: 387 VHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSA-RVFDRMRIKDHVSWTTIIACYAQSS 445
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAI---------------IASYARR----------- 227
+ EA+ F + EG++ + +I + SYA R
Sbjct: 446 RYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLILKNR 505
Query: 228 --------GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
G+ A F + + D+VTW +M++ FA++ +EA+ LF ML +G
Sbjct: 506 IIDIYGECGEVCYALNIFEMLDKK----DIVTWTSMVNCFAENGLLHEAVALFGKMLNAG 561
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I+P++V + G+L A S+ G+EIH + R ++ S+L+DMYS CGS+ A
Sbjct: 562 IQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYAL 621
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ + K+V W AMI G HG +I +F+RMLE G+ + V+ +++L ACSH
Sbjct: 622 KVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSK 681
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LV++G M +Y ++ +EHYACVVD+L RSG+ EAY ++ +P+ + + A
Sbjct: 682 LVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCAL 741
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C IH +LA+ ++ E+ P +V++SN+ A G+W+ + +R M E+ ++
Sbjct: 742 LGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLR 801
Query: 520 KQPGFSRVEKRN 531
K P S +E N
Sbjct: 802 KDPACSWIEIGN 813
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 204/413 (49%), Gaps = 47/413 (11%)
Query: 27 KALRQGKQVHALLCTN----DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
+A+ +G+Q+HA D + L +KL+ +Y CG + A +FD +P VF N
Sbjct: 69 RAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWN 128
Query: 83 WMVMASAFTGNFQEAIGYFSLMR--EFIYRC--NKFTFSIVLKACVGLLDIKKGKQVHAV 138
++ A +G EA+G + MR E + + T + VLKAC D + G +VH +
Sbjct: 129 ALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGL 188
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE-RDVVSWTSMISGYCNVSKVDE 197
A + G + V NAL+ MY+KCGLL SA RVF M + RDV SW S ISG E
Sbjct: 189 AVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLE 248
Query: 198 AVVLFERMKLEGLEPNQFTY----------------------------------NAIIAS 223
A+ LF RM+ +G N +T NA++
Sbjct: 249 ALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCNALLVM 308
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
YAR G ++A F + + D ++WN+M+S + Q++ EA+ F M+ +G P+
Sbjct: 309 YARCGWVDSALRVFREIGDK----DYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPD 364
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+ + +L A G G + GRE+HA + L D+ + L+DMY KC S++ + +F+
Sbjct: 365 HACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFD 424
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
RIK+ SW +I CY + +I F +EG++ + + + S+L ACS
Sbjct: 425 RMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACS 477
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 143/326 (43%), Gaps = 41/326 (12%)
Query: 129 IKKGKQVHAVATQMGFENDVSVG---NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
+ +G+Q+HA A G D G L+ MY KCG L A R+F GM R V SW ++
Sbjct: 71 VSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNAL 130
Query: 186 ISGYCNVSKVDEAVVLFERMK----LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT 241
I + EAV ++ M+ + G P+ T +++ + GD
Sbjct: 131 IGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAV 190
Query: 242 AEGFVPDLVTWNAMISGFAQSKRENEALK------------------------------- 270
G + NA++ +A+ + AL+
Sbjct: 191 KSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEAL 250
Query: 271 -LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
LF+ M G N+ T GVLQ + GRE+HA + + G ++ +AL+ MY
Sbjct: 251 DLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI-QCNALLVMY 309
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
++CG + A +F K+ SWN+M+ CY ++ + +I+ F M++ G + ++
Sbjct: 310 ARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIV 369
Query: 390 SVLSACSHGGLVEKGLEIFR-SMKER 414
S+LSA H G + G E+ ++K+R
Sbjct: 370 SLLSAVGHLGRLINGREVHAYAVKQR 395
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 115/238 (48%), Gaps = 11/238 (4%)
Query: 215 FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
F ++ Y + G A F M A + +WNA+I S EA+ +++
Sbjct: 94 FLATKLLFMYGKCGRLPDAHRLFDGMPAR----TVFSWNALIGACLSSGGAGEAVGVYRA 149
Query: 275 M----LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
M V+G P+ T+ VL+A G G + G E+H L + GL +AL+ MY+
Sbjct: 150 MRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYA 209
Query: 331 KCGSLKDARTLFEITRI-KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
KCG L A +FE R ++VASWN+ I ++GM +++LF RM +G N T +
Sbjct: 210 KCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTV 269
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
VL C+ + G E+ ++ + G + + + A +V M R G + A + R++
Sbjct: 270 GVLQVCAELAQLNHGRELHAALL-KCGTEFNIQCNALLV-MYARCGWVDSALRVFREI 325
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 171/574 (29%), Positives = 282/574 (49%), Gaps = 59/574 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C LR G Q+HA +D + +++ + +YA C ++ A+ +FD N N
Sbjct: 288 VLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLN 347
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ N M+ + N A+ F + + ++ + S L+AC + + +G Q+H
Sbjct: 348 LQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHG 407
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+AT+ F ++ V NA IDMY KC L A RVF M +D VSW ++I+ + + +
Sbjct: 408 LATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSK 467
Query: 198 AVVLFERMKLEGLEP----------------------------------NQFTYNAIIAS 223
+ + M G+EP N + ++++
Sbjct: 468 TLNILVSMLRSGMEPDEYTFGSVLKACAGDSLNHGMEIHTTIVKLGMASNPYIGSSLVDM 527
Query: 224 YAR-----------------RGDSNAAFAFFSRMTAEGFVPD------LVTWNAMISGFA 260
Y++ GDSN + + D +V+WNA+ISG+
Sbjct: 528 YSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYV 587
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
K+ +A + F M+ GI P+ T + VL SI +G++IHA V + L DV+
Sbjct: 588 MRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVY 647
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
S L+DMYSKCG+L D+R +FE I++ +WNAMI Y HGM + +I+LFE M+
Sbjct: 648 ICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMN 707
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ N T +S+L AC+H GLVE+GL+ F MK+ YG+ EHY+ +VD+L +SG + +A
Sbjct: 708 IMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKA 767
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIH-GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
+L++++P + + + C I+ + A + + +++LSNI A
Sbjct: 768 LELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYAD 827
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
G W +A LR M+ ++K+PG S VE R+EF
Sbjct: 828 AGMWDKASELRTAMRSDKLKKEPGCSWVEIRDEF 861
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/508 (26%), Positives = 237/508 (46%), Gaps = 74/508 (14%)
Query: 5 IFPINNLSVNY---------LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK-LV 54
IF I+ SVN+ + +C K +A GKQ HA + + S L+
Sbjct: 32 IFSISTASVNHEKPATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLL 91
Query: 55 GVYAGCGDVNSARLVFDKIP-------NPNVF----------------------MLNWMV 85
+Y CG++ A +FD +P N +F +++W
Sbjct: 92 QLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNS 151
Query: 86 MASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
M S F TG E++ F M + +FS++LK C L + K G Q+H +A +MG
Sbjct: 152 MLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMG 211
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
++ DV G+AL+DMY+KC L + VF+ M +++ +SW+++I+G + +D + +F+
Sbjct: 212 YDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFK 271
Query: 204 RMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFVP----------- 247
M+ G+ +Q Y +++ S A R G A A S +G V
Sbjct: 272 EMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCN 331
Query: 248 ---------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
+L ++NAMI+G++Q AL LF+ + S + + ++++G L+
Sbjct: 332 NMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALR 391
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A + G ++H L + ++ +A IDMY KC +L +A +F+ K+ S
Sbjct: 392 ACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVS 451
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
WNA+I + ++ ++ + ML GM +E T SVL AC+ G + G+EI ++
Sbjct: 452 WNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACA-GDSLNHGMEIHTTIV 510
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ G+ + + +VDM + G + EA
Sbjct: 511 -KLGMASNPYIGSSLVDMYSKCGMIDEA 537
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 143/555 (25%), Positives = 250/555 (45%), Gaps = 87/555 (15%)
Query: 19 LLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + + G Q+H AL D ++ S S L+ +YA C ++ + VF +P
Sbjct: 187 ILKVCSILENYKLGTQIHGIALRMGYDTDVVS-GSALLDMYAKCKRLDESFTVFYAMPQK 245
Query: 77 NVFMLNW-MVMASAFTGNFQEA-IGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N ++W ++A NF + + F M++ ++ ++ VLK+C L D++ G Q
Sbjct: 246 N--WISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQ 303
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+HA A + F D V A +DMY+KC + A+R+F ++ S+ +MI+GY
Sbjct: 304 LHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDN 363
Query: 195 VDEAVVLF-----------------------------ERMKLEGLEP------NQFTYNA 219
A++LF E ++L GL N NA
Sbjct: 364 GFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANA 423
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
I Y + + A F M + D V+WNA+I+ Q++ ++ L + ML SG
Sbjct: 424 FIDMYGKCEALDEACRVFDEMGRK----DAVSWNAIIAAHEQNEERSKTLNILVSMLRSG 479
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA- 338
++P+ T VL+A S+ G EIH + ++G+ + + GS+L+DMYSKCG + +A
Sbjct: 480 MEPDEYTFGSVLKACA-GDSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAE 538
Query: 339 --------------------RTLFEITRIKN------VASWNAMIGCYGKHGMVDSSIEL 372
T+ E I++ + SWNA+I Y + +
Sbjct: 539 KIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRF 598
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC--VVDM 430
F RM+E G+ ++ T +VL C++ + G +I + ++ ++ + Y C +VDM
Sbjct: 599 FNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKK---ELQYDVYICSTLVDM 655
Query: 431 LCRSGRMVEAYDLLRQVPM--YVT-NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
+ G + ++ + + P+ +VT N+M + + HG + A+ + E M +
Sbjct: 656 YSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAH----HGMGEEAIKLFESMVLMNIMPN 711
Query: 488 DG-FVMLSNICAADG 501
FV L CA G
Sbjct: 712 HATFVSLLRACAHMG 726
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI-GC 359
++G++ HA + G VF + L+ +Y CG+L A LF+ +++V SWNAMI G
Sbjct: 66 ELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGY 125
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
+ MV +S+ FE M + V+ S+LS G + +++F M R GV+
Sbjct: 126 AASNDMVRASL-CFEMMPTRDV----VSWNSMLSGFLQTGENLESVKVFIEMG-RSGVEF 179
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQV 447
+ ++ ++ +C ++E Y L Q+
Sbjct: 180 DNKSFSVILK-VC---SILENYKLGTQI 203
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 174/604 (28%), Positives = 286/604 (47%), Gaps = 104/604 (17%)
Query: 29 LRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
+R VH L+ L L + L+ YA G + AR VFD++P+PN+F N ++
Sbjct: 28 VRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLS 87
Query: 87 ASAF-------------------------------TGNFQEAIG-YFSLMREFIYRCNKF 114
A A TG+ ++ Y +L+RE R +
Sbjct: 88 ALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRI 147
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH-- 172
T S ++ L D G VH ++GF VG+ L+DMY+K GL+ ARRVF
Sbjct: 148 TLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM 207
Query: 173 -------------------------GMFE----RDVVSWTSMISGYCNVSKVDEAVVLFE 203
G+F+ RD ++WT+M++G EA+ +F
Sbjct: 208 EAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFR 267
Query: 204 RMKLEGLEPNQFTYNAIIAS-----------------------------------YARRG 228
RM+ EG+ +Q+T+ +I+ + Y++
Sbjct: 268 RMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCR 327
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
A A F RMT ++++W AMI G+ Q+ EA++ F M + GIKP++ T+
Sbjct: 328 SIRLAEAVFRRMTCR----NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLG 383
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
V+ + S++ G + H L GL + +AL+ +Y KCGS++DA LF+
Sbjct: 384 SVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH 443
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+ SW A++ Y + G +I+LFE+ML G++ + VT I VLSACS GLVEKG + F
Sbjct: 444 DQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYF 503
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
SM++ +G+ +HY C++D+ RSGR EA + ++Q+P + C + G
Sbjct: 504 DSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGN 563
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
++ E E + P +V+L ++ AA G+W E +LR+ M+++ V+K+PG S ++
Sbjct: 564 MEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIK 623
Query: 529 KRNE 532
+N+
Sbjct: 624 YKNK 627
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 150/291 (51%), Gaps = 11/291 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C AL +GKQ+HA + + N+F + S LV +Y+ C + A VF ++
Sbjct: 284 ILTACGALAALEEGKQIHAYITRTWYEDNVF-VGSALVDMYSKCRSIRLAEAVFRRMTCR 342
Query: 77 NVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N+ ++W M + N +EA+ FS M+ + + FT V+ +C L +++G Q
Sbjct: 343 NI--ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H +A G ++V NAL+ +Y KCG + A R+F M D VSWT++++GY K
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWN 253
E + LFE+M GL+P+ T+ ++++ +R G +F M + G VP +
Sbjct: 461 AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYT 520
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
MI +++S R EA + K M S P+ +L + L G+++IG+
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHS---PDAFGWATLLSSCRLRGNMEIGK 568
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 173/565 (30%), Positives = 285/565 (50%), Gaps = 41/565 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C K L G Q+H+++ N N+F + + LV +YA G + AR F+ I N
Sbjct: 434 ILSACACLKYLDLGHQLHSVIIKNKFASNLF-VGNALVDMYAKSGALEDARQQFELIRNR 492
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ N +++ + EA F M ++ + + +L AC + +++GKQVH
Sbjct: 493 DNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVH 552
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ + G E + G++LIDMY+KCG + SA ++ M ER VVS ++I+GY ++ ++
Sbjct: 553 CLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQIN-LE 611
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD-------- 248
+AV LF M +EG+ + T+ +++ + + N S + G D
Sbjct: 612 QAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSL 671
Query: 249 -------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
V W AMISG +Q+ AL+L+K M + P+
Sbjct: 672 LGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPD 731
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF- 342
T L+A + SI+ G E H+L+ G D T SAL+DMY+KCG +K + +F
Sbjct: 732 QATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFK 791
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E++R K+V SWN+MI + K+G + ++ +F+ M + + ++VT + VL+ACSH G V
Sbjct: 792 EMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVS 851
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G IF M YG++ +H AC+VD+L R G + EA + + ++ +
Sbjct: 852 EGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGA 911
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IHG E+ E+ + +V+LSNI AA G W E LR+ M+EK V+K P
Sbjct: 912 CRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLP 971
Query: 523 GFSRV---EKRNEFVEKEVQNESKA 544
G S + ++ N FV + + S +
Sbjct: 972 GCSWIVVGQETNMFVAGDKSHHSAS 996
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 219/401 (54%), Gaps = 10/401 (2%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
L + +V +YA C DV+ A F ++ + ++ N ++ + G + YF L+
Sbjct: 96 LGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSG 155
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
N+FTF+IVL +C L +K G+QVH +MGFE+ ALI MY+KC L AR
Sbjct: 156 VWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDAR 215
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
+F G E D VSWTSMI GY V +EAV +F+ M+ G EP+Q + +I +Y G
Sbjct: 216 SIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLG 275
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
+ A FSRM ++V WN MISG A+ EA++ F+ M +GIK T+
Sbjct: 276 RLDNASDLFSRMPNR----NVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLG 331
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
VL A ++ G +HA + GLH +V+ GS+L+ MY+KCG ++ A+ +F+ +
Sbjct: 332 SVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQ 391
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
NV WNAM+G Y ++G + +ELF M G ++ T S+LSAC+ ++ G ++
Sbjct: 392 NVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLH 451
Query: 409 RS-MKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLR 445
+K ++ + + +VDM +SG + +A ++L+R
Sbjct: 452 SVIIKNKFASNLFVGN--ALVDMYAKSGALEDARQQFELIR 490
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 225/465 (48%), Gaps = 53/465 (11%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
G + ++AL+QG +H+ N++ + S LV +YA CG + +A+ VFD + NV
Sbjct: 345 FGLLVHAEALKQG--LHS-------NVY-VGSSLVSMYAKCGKMEAAKKVFDTLNEQNVV 394
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
+ N M+ G E + F M+ + + FT+S +L AC L + G Q+H+V
Sbjct: 395 LWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVI 454
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
+ F +++ VGNAL+DMY+K G L AR+ F + RD VSW +I GY EA
Sbjct: 455 IKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAF 514
Query: 200 VLFERMKLEGLEPNQFTYNAIIAS-----------------------------------Y 224
LF RM L G+ P++ + +I+++ Y
Sbjct: 515 HLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMY 574
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
A+ G ++A + M +V+ NA+I+G+AQ E +A+ LF+ MLV GI
Sbjct: 575 AKCGAIDSAHKILACMPERS----VVSMNALIAGYAQINLE-QAVNLFRDMLVEGINSTE 629
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI-DVFTGSALIDMYSKCGSLKDARTLF- 342
+T +L A + +GR+IH+L+ +MGL + D F G +L+ MY DA LF
Sbjct: 630 ITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFS 689
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E + K+ W AMI ++ +++L++ M + ++ T +S L AC+ ++
Sbjct: 690 EFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIK 749
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
G E S+ G + + +VDM + G + + + +++
Sbjct: 750 DGTET-HSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEM 793
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 216/437 (49%), Gaps = 18/437 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + + ++ G+QVH + S + L+G+YA C + AR +FD +
Sbjct: 166 VLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELD 225
Query: 78 VFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
++W M + G +EA+ F M + ++ F V+ A V D+ +
Sbjct: 226 --KVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYV---DLGRLDNA 280
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS----WTSMISGYCN 191
+ ++M N V N +I ++K G A F M + + S S++S +
Sbjct: 281 SDLFSRMPNRN-VVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIAS 339
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
++ +D +++ +GL N + +++++ YA+ G AA F + + ++V
Sbjct: 340 LAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQ----NVVL 395
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
WNAM+ G+ Q+ NE ++LF M G P++ T + +L A + +G ++H+++
Sbjct: 396 WNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVII 455
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
+ ++F G+AL+DMY+K G+L+DAR FE+ R ++ SWN +I Y + +
Sbjct: 456 KNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFH 515
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LF RM G+ +EV+L S+LSAC+ +E+G ++ + + G + + ++DM
Sbjct: 516 LFRRMNLLGILPDEVSLASILSACASVRGLEQGKQV-HCLSVKTGQETKLYSGSSLIDMY 574
Query: 432 CRSGRMVEAYDLLRQVP 448
+ G + A+ +L +P
Sbjct: 575 AKCGAIDSAHKILACMP 591
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 159/334 (47%), Gaps = 9/334 (2%)
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
K +HA + ++GF + +GN ++D+Y+KC + A R F + ++D+++W S++S +
Sbjct: 79 KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
V F + G+ PN+FT+ +++S AR + GF
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
A+I +A+ +A +F G + + G ++ G ++++ +E+ +
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEME----K 254
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
+G D +I+ Y G L +A LF +NV +WN MI + K G +IE
Sbjct: 255 VGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEF 314
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F+ M + G+++ TL SVLSA + ++ GL + + + G+ + + +V M
Sbjct: 315 FQNMRKAGIKSTRSTLGSVLSAIASLAALDFGL-LVHAEALKQGLHSNVYVGSSLVSMYA 373
Query: 433 RSGRMVEA---YDLLRQVPMYVTNSMAGAF-RNG 462
+ G+M A +D L + + + N+M G + +NG
Sbjct: 374 KCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNG 407
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 283/581 (48%), Gaps = 78/581 (13%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYA--GCGDVNSARLVFDKIPN 75
L+ +C+ +LRQ KQ H ++ T + SKL + A + AR VFD+IP
Sbjct: 36 LIERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 76 PNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
PN F N ++ A A + +I + ++ E NK+TF ++KA + + G+
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H +A + +DV V N+LI Y CG L SA +VF + E+DVVSW SMI+G+
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
D+A+ LF++M+ E ++ + T NA
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW--------------------------- 252
++ Y + G A F M + D VTW
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEK----DNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 328
Query: 253 ----NAMISGFAQSKRENEALKLFKGM-LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
NA+IS + Q+ + NEAL +F + L +K N +T+ L A G++++GR IH
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+ + + G+ ++ SALI MYSKCG L+ +R +F ++V W+AMIG HG +
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
++++F +M E ++ N VT +V ACSH GLV++ +F M+ YG+ ++HYAC+
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
VD+L RSG + +A + +P+ + S+ GA C IH +LA E+ R
Sbjct: 509 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRND 568
Query: 488 DGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
V+LSNI A G+W LRK M+ ++K+PG S +E
Sbjct: 569 GAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 609
>gi|115484979|ref|NP_001067633.1| Os11g0256100 [Oryza sativa Japonica Group]
gi|62734753|gb|AAX96862.1| Similar to selenium-binding protein [Oryza sativa Japonica Group]
gi|77549625|gb|ABA92422.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644855|dbj|BAF27996.1| Os11g0256100 [Oryza sativa Japonica Group]
gi|125597201|gb|EAZ36981.1| hypothetical protein OsJ_21321 [Oryza sativa Japonica Group]
Length = 582
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 172/504 (34%), Positives = 261/504 (51%), Gaps = 49/504 (9%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFT-GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
AR VFD P+ + +M N ++ A A + + ++A+ ++ MR + +T+ IVL AC
Sbjct: 75 ARRVFDAAPSRDAYMWNTLLRAHAHSRAHARDALALYARMRAAGVAPDHYTYPIVLPACA 134
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD----VV 180
+ G+ H A + D V +ALI MYS+ G + A RVF ERD VV
Sbjct: 135 AARAPRLGRAAHGDAVRFALARDGFVSSALISMYSQEGEVRDAERVF---AERDDARTVV 191
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------- 217
SWT+M++GY EAV LF M G+ PN+ T
Sbjct: 192 SWTAMVAGYAQNCFFGEAVTLFSDMVAAGVLPNEITLISFLPCLRGQEWLPVGEMVHGFV 251
Query: 218 ------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
NA+I Y R G + A F+ M++ LV+WN M++ + Q
Sbjct: 252 VKLGFDANVPMVNALITMYGRCGSAPVARVLFNGMSSR----TLVSWNTMVAMYEQHGDG 307
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
+A+K F+ ML + + VT+ VL A +G++ G+ +H L GL D G+ L
Sbjct: 308 VQAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALGTGKWVHELARSHGLDTDARIGNVL 367
Query: 326 IDMYSKCGSLKDARTLFEI--TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
+DMY+KCG + A+ +F R +V SW+AMI Y HG + +++LF M EG+R
Sbjct: 368 VDMYAKCGEIAYAKEVFHSHGLRGHSVVSWSAMINAYANHGEAEEALKLFSLMRNEGVRP 427
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
N T +VL AC H GLV++GL+ F S+ Y + + EHYAC+VDML R+GR+VEAY +
Sbjct: 428 NSFTFTAVLMACCHSGLVDEGLKHFNSIATDYQMSPTLEHYACMVDMLGRAGRLVEAYGI 487
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+R +P+ + GAF GC +HG +LA + +E F+ G +V+++N+ G
Sbjct: 488 IRGMPIRPDKCVWGAFLGGCRLHGMVELAEYVAKELFDSGSNDVTFYVLMANMYFEAGML 547
Query: 504 HEAENLRKIMKEKNVQKQPGFSRV 527
+AE +R +MKE ++K G S V
Sbjct: 548 EDAERIRGVMKEMELKKTAGHSLV 571
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 184/402 (45%), Gaps = 45/402 (11%)
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV-S 193
+HA A +G + + +LI + L ARRVF RD W +++ + + +
Sbjct: 44 IHARAVVLGISANPAFATSLITAVAP-ACLAYARRVFDAAPSRDAYMWNTLLRAHAHSRA 102
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIAS-------------------YARRGDSNAAF 234
+A+ L+ RM+ G+ P+ +TY ++ + +A D +
Sbjct: 103 HARDALALYARMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGDAVRFALARDGFVSS 162
Query: 235 AFFSRMTAEGFVPD-------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
A S + EG V D +V+W AM++G+AQ+ EA+ LF M+ +G+
Sbjct: 163 ALISMYSQEGEVRDAERVFAERDDARTVVSWTAMVAGYAQNCFFGEAVTLFSDMVAAGVL 222
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN +T+ L + +G +H V ++G +V +ALI MY +CGS AR L
Sbjct: 223 PNEITLISFLPCLRGQEWLPVGEMVHGFVVKLGFDANVPMVNALITMYGRCGSAPVARVL 282
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F + + SWN M+ Y +HG +I+ F RML E + + VTL+SVLSAC+ G +
Sbjct: 283 FNGMSSRTLVSWNTMVAMYEQHGDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSGAL 342
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL-----LRQVPMYVTNSMA 456
G + + +G+ +VDM + G + A ++ LR + ++M
Sbjct: 343 GTG-KWVHELARSHGLDTDARIGNVLVDMYAKCGEIAYAKEVFHSHGLRGHSVVSWSAMI 401
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
A+ N HG + A+ + G+R P+ F + + A
Sbjct: 402 NAYAN----HGEAEEALKLFSLMRNEGVR-PNSFTFTAVLMA 438
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 180/405 (44%), Gaps = 45/405 (11%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMRE 106
+ S L+ +Y+ G+V A VF + + +++W M + + N F EA+ FS M
Sbjct: 160 VSSALISMYSQEGEVRDAERVFAERDDART-VVSWTAMVAGYAQNCFFGEAVTLFSDMVA 218
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
N+ T L G + G+ VH ++GF+ +V + NALI MY +CG
Sbjct: 219 AGVLPNEITLISFLPCLRGQEWLPVGEMVHGFVVKLGFDANVPMVNALITMYGRCGSAPV 278
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE------------------ 208
AR +F+GM R +VSW +M++ Y +A+ F RM E
Sbjct: 279 ARVLFNGMSSRTLVSWNTMVAMYEQHGDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACAR 338
Query: 209 -----------------GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
GL+ + N ++ YA+ G+ A F G +V+
Sbjct: 339 SGALGTGKWVHELARSHGLDTDARIGNVLVDMYAKCGEIAYAKEVFHSHGLRGH--SVVS 396
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALV 310
W+AMI+ +A EALKLF M G++PN+ T T VL A +G + G + +++
Sbjct: 397 WSAMINAYANHGEAEEALKLFSLMRNEGVRPNSFTFTAVLMACCHSGLVDEGLKHFNSIA 456
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVDSS 369
+ + + ++DM + G L +A + I+ + W A +G HGMV+ +
Sbjct: 457 TDYQMSPTLEHYACMVDMLGRAGRLVEAYGIIRGMPIRPDKCVWGAFLGGCRLHGMVELA 516
Query: 370 IELFERMLEEGMRANEVTLISVLSACS-HGGLVEKGLEIFRSMKE 413
+ + + + G +N+VT +++ G++E I MKE
Sbjct: 517 EYVAKELFDSG--SNDVTFYVLMANMYFEAGMLEDAERIRGVMKE 559
>gi|449451309|ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
gi|449526377|ref|XP_004170190.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 577
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 286/574 (49%), Gaps = 82/574 (14%)
Query: 7 PINNLSVNYLDC--LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGC--- 60
P+++L ++ C L KC++ K LR G +H+ L L+ L ++L+ +Y+ C
Sbjct: 3 PLSDLFPSFDHCARLFSKCIQHKHLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSM 62
Query: 61 ----------------------------GDVNSARLVFDKIPNPNVFMLNWMVMASAFTG 92
G + AR VFD++P+PN+ N ++ + G
Sbjct: 63 ENAQKAFDDLPIRNIHSWNTILASYSRAGFFSQARKVFDEMPHPNIVSYNTLISSFTHHG 122
Query: 93 NFQEAIGYFSLMREF--IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
+ E++ F M++ + ++ T + C L ++ +QVH A +G E ++ V
Sbjct: 123 LYVESMNIFRQMQQDFDLLALDEITLVSIAGTCACLGALEFLRQVHGAAIVIGLEFNMIV 182
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
NA++D Y KCG D + +F RMK
Sbjct: 183 CNAIVDAYGKCG-------------------------------DPDASYSIFSRMK---- 207
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
E + T+ +++ +Y + + AF FS M V ++ TW A+I+ ++K NEAL
Sbjct: 208 ERDVVTWTSMVVAYNQTSRLDDAFRVFSCMP----VKNVHTWTALINALVKNKYSNEALD 263
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID---VFTGSALID 327
LF+ ML PN T GVL A I G+EIH L+ R ++ V+ +ALID
Sbjct: 264 LFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIRRSSELNFPNVYVCNALID 323
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
+YSK G +K AR LF + K+V SWN++I + ++G+ ++ F +M E G+R N+VT
Sbjct: 324 LYSKSGDVKSARMLFNLILEKDVVSWNSLITGFAQNGLGREALLAFRKMTEVGIRPNKVT 383
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
++VLSACSH GL +GL I M++ Y ++ S EHYA ++DM R R+ EA DL+ +
Sbjct: 384 FLAVLSACSHTGLSSEGLCILELMEKFYDIEPSLEHYAVMIDMFGRENRLAEALDLISRA 443
Query: 448 PMYVTN-SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
P + + GA C IH DLA+ E FEM +VMLSN+ AA W +A
Sbjct: 444 PNGSKHVGIWGAVLGACRIHENLDLAIRAAETLFEMEPDNAGRYVMLSNVFAAASRWMDA 503
Query: 507 ENLRKIMKEKNVQKQPGFSRVEKRN---EFVEKE 537
N+RK+M+E+ +K+ +S +E RN +FV ++
Sbjct: 504 HNVRKLMEERGFKKEVAYSCIEIRNIRHKFVARD 537
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 172/561 (30%), Positives = 286/561 (50%), Gaps = 53/561 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + L G+Q+H+ + ++ N+F +++ LV +YA CG + AR F+ I N
Sbjct: 456 ILSACACLECLEMGRQLHSFIIKHNFEYNLF-VENTLVDMYAKCGALEEARQQFEFIRNR 514
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ N +++ + EA F M ++ + + +L C L +++G+QVH
Sbjct: 515 DNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVH 574
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ G + + G++LIDMY KCG + +AR VF M R VVS ++I+GY V
Sbjct: 575 CFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLV- 633
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
EA+ LF+ M+ EGL P++ T+ +++ +
Sbjct: 634 EAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSL 693
Query: 224 ------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
R+ D++ F+ F + + W A+ISG Q+ EAL+L++ M
Sbjct: 694 LVMYMNSQRKTDADILFSEFQ------YPKSTILWTAIISGHTQNGCSEEALQLYQEMHR 747
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
+ +P+ T VL+A + S+ GR IH+L+ +GL D TGSA++DMY+KCG +K
Sbjct: 748 NNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKS 807
Query: 338 ARTLFEITRIKN-VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
+ +FE KN V SWN+MI + K+G ++++++F+ M +R ++VT + VL+ACS
Sbjct: 808 SVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACS 867
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
H G V +G EIF M Y + +H AC++D+L R G + EA + + ++ +
Sbjct: 868 HAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIW 927
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
C IHG E+ E+ +V+LSNI AA G W E ++R+ M+EK
Sbjct: 928 ATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMREK 987
Query: 517 NVQKQPGFSRV---EKRNEFV 534
++K PG S + +K N FV
Sbjct: 988 GLRKLPGCSWIVVGQKTNLFV 1008
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 216/393 (54%), Gaps = 7/393 (1%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
L S +V +YA CG+V A F+++ ++ N ++ + G+ ++ I F ++
Sbjct: 118 LGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCG 177
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
N+FT++IVL +C L+DI GKQVH +MGFE + +LIDMYSKCG L AR
Sbjct: 178 VSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDAR 237
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
++F + + D VSWT+MI+GY V +EA+ +FE M+ GL P+Q + +I + G
Sbjct: 238 KIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLG 297
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
+ A F +M ++V WN MISG + + EA+ FK M +G+K T+
Sbjct: 298 RLDDACDLFVQMPN----TNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLG 353
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
VL A ++ G +HA + GL+ +V+ GS+LI+MY+KC ++ A+ +F+ +
Sbjct: 354 SVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDER 413
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
N+ WNAM+G Y ++G ++LF M G +E T S+LSAC+ +E G ++
Sbjct: 414 NLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLH 473
Query: 409 R-SMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+K + + E+ +VDM + G + EA
Sbjct: 474 SFIIKHNFEYNLFVEN--TLVDMYAKCGALEEA 504
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 201/387 (51%), Gaps = 32/387 (8%)
Query: 59 GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI 118
G G ++ A +F ++PN NV N M+ G EAI +F M + + + T
Sbjct: 295 GLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGS 354
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
VL A L + G VHA A + G ++V VG++LI+MY+KC + +A++VF + ER+
Sbjct: 355 VLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERN 414
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAA 233
+V W +M+ GY + + LF M+ G P++FTY +I+++ A G +
Sbjct: 415 LVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHS 474
Query: 234 FAFFSRMTAEGFVP--------------------------DLVTWNAMISGFAQSKRENE 267
F FV D V+WNA+I G+ Q + E+E
Sbjct: 475 FIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDE 534
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
A +F+ M++ GI P+ V++ +L +++ G ++H + + GL ++ GS+LID
Sbjct: 535 AFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLID 594
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MY KCG+++ AR +F ++V S NA+I Y ++ +V+ +I+LF+ M EG+ +E+T
Sbjct: 595 MYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVE-AIDLFQEMQNEGLNPSEIT 653
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKER 414
S+L AC+ + G +I +++R
Sbjct: 654 FASLLDACTGPYKLNLGRQIHCLIQKR 680
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 215/442 (48%), Gaps = 14/442 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + + GKQVH + S + L+ +Y+ CG + AR +FD + +P+
Sbjct: 188 VLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPD 247
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
M+ G +EA+ F M++ ++ F V+ ACVGL + +
Sbjct: 248 TVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLF- 306
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS----WTSMISGYCNVS 193
QM N V N +I + K G A F M++ V S S++S ++
Sbjct: 307 --VQMPNTN-VVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLE 363
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
++ +++ + +GL N + +++I YA+ AA F + +LV WN
Sbjct: 364 ALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDER----NLVLWN 419
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
AM+ G+AQ+ ++ +KLF M G P+ T T +L A +++GR++H+ + +
Sbjct: 420 AMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKH 479
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
++F + L+DMY+KCG+L++AR FE R ++ SWNA+I Y + D + +F
Sbjct: 480 NFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMF 539
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
RM+ +G+ +EV+L S+LS C++ +E+G ++ + G++ + ++DM +
Sbjct: 540 RRMILDGIAPDEVSLASILSGCANLQALEQGEQV-HCFLVKSGLQTCLYAGSSLIDMYVK 598
Query: 434 SGRMVEAYDLLRQVPMYVTNSM 455
G + A + +P SM
Sbjct: 599 CGAIEAARYVFSCMPSRSVVSM 620
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 200/440 (45%), Gaps = 47/440 (10%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C +AL QG+QVH L + L S L+ +Y CG + +AR VF +P
Sbjct: 554 LASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMP 613
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ +V +N ++A + EAI F M+ ++ TF+ +L AC G + G+Q
Sbjct: 614 SRSVVSMN-AIIAGYAQNDLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQ 672
Query: 135 VHAVATQMGFENDVS-VGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+H + + G D +G +L+ MY A +F + + + WT++ISG+
Sbjct: 673 IHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQN 732
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTY----------------------------------- 217
+EA+ L++ M P+Q T+
Sbjct: 733 GCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTG 792
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
+A++ YA+ GD ++ F M ++ D+++WN+MI GFA++ ALK+F M
Sbjct: 793 SAVVDMYAKCGDMKSSVQVFEEMGSKN---DVISWNSMIVGFAKNGYAENALKIFDEMKH 849
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA-LIDMYSKCGSLK 336
+ I+P++VT GVL A G + GREI ++ + A +ID+ + G LK
Sbjct: 850 TRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLK 909
Query: 337 DARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSA 394
+A + + N W ++G HG E+++E E ++ L+S + A
Sbjct: 910 EAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYA 969
Query: 395 CSHGGLVEKGLEIFRSMKER 414
S G ++ + R+M+E+
Sbjct: 970 AS--GNWDEVNSVRRAMREK 987
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
L + + + IHA + G GSA++D+Y+KCG+++ A F +++ +WN+
Sbjct: 93 LAQASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNS 152
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKG 404
++ Y + G ++ I F + G+ N+ T VLS+C+ H G+++ G
Sbjct: 153 VLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMG 212
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
E F S E ++DM + G +V+A + V T S
Sbjct: 213 FE-FNSFCE-----------GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQ 260
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKEKNV 518
+ G + A+ + E+ ++GL PD FV + C G +A +L M NV
Sbjct: 261 V-GLPEEALKVFEDMQKLGL-VPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNV 314
>gi|115445617|ref|NP_001046588.1| Os02g0290000 [Oryza sativa Japonica Group]
gi|47847947|dbj|BAD21737.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536119|dbj|BAF08502.1| Os02g0290000 [Oryza sativa Japonica Group]
Length = 930
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 167/533 (31%), Positives = 277/533 (51%), Gaps = 50/533 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C + LR G +VH + + L SL + LV Y+ C ++A F I N
Sbjct: 410 LLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITIQNK 469
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQ 134
+ ++W + SA + +F L+ E + ++ +L IK ++
Sbjct: 470 DS--VSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIRMSTFCGIKMVQE 527
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H + ++G+ D SV NA++D Y+KCG L A +F + R++V+ +MIS Y +
Sbjct: 528 SHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNC 587
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
V++A + F M AE DL TWN
Sbjct: 588 VEDAEMTFNHM------------------------------------AE---KDLTTWNL 608
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M +AQ+ ++A LF + G+ P+ +++T +L A S+Q+ ++ H + R
Sbjct: 609 MSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRAS 668
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L D+ AL+D YSKCG++ +A LF+++ K++ + AMIG Y HGM + ++ELF
Sbjct: 669 LE-DIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFS 727
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
+ML ++ + V L ++LSACSH GLV+ G++IF+S++E YGV+ ++EH AC+VD+L RS
Sbjct: 728 KMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARS 787
Query: 435 GRMVEAYDLLRQVPMYVTNSMA-GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
GR+ +AY +P +V N+ A G+ C +HG + + F M +V++
Sbjct: 788 GRLQDAYSFALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVIM 847
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFVEKEVQNESK 543
SNI AAD +W E++RK+MK K+++K G S +E R+ FV +VQ++ +
Sbjct: 848 SNIFAADDKWESVEHVRKLMKSKDMKKPAGCSWIEVEKTRHLFVASDVQHQDR 900
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 141/554 (25%), Positives = 244/554 (44%), Gaps = 84/554 (15%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGD---VNSARLVFDKIP 74
+L C K + LR G+ +H + L +L + LV +YA CG ++ A L F I
Sbjct: 204 VLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTIC 263
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK--G 132
+V N ++ + G F+EA+ F M N T + VL C L++ + G
Sbjct: 264 CKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFC-SLVEYGRHYG 322
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
K++H + G E D+SV NAL+ YSK + + +F D+V+W ++I+GY
Sbjct: 323 KEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMN 382
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------- 229
A+ LF+ + G+ P+ + +++ + A+ G+
Sbjct: 383 RYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSL 442
Query: 230 SNAAFAFFS---RMTA--EGFVP----DLVTWNAMISGFAQSKRENEA-LKLFKGMLVSG 279
NA +F+S R A F+ D V+WNA++S A S+ E +L M
Sbjct: 443 MNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWHDV 502
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ ++VT+ +++ G I++ +E H R+G D +A++D Y+KCG L DA
Sbjct: 503 TQWDSVTILNIIRMSTFCG-IKMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAE 561
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMV-------------------------------DS 368
TLF +N+ + N MI CY K+ V D
Sbjct: 562 TLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQ 621
Query: 369 SIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
+ LF ++ EG+ + +++ ++LSAC H V+ + M I E ++
Sbjct: 622 AFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASLEDIHLE--GALL 679
Query: 429 DMLCRSGRMVEAYDLLRQVPMY----VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
D + G + AY+L QV ++ + +M GA+ +HG + AV + + + +
Sbjct: 680 DAYSKCGNIANAYNLF-QVSLHKDLVIFTAMIGAYA----MHGMAEKAVELFSKMLTLDI 734
Query: 485 RKPDGFVMLSNICA 498
KPD V+ + + A
Sbjct: 735 -KPDHVVLTALLSA 747
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 216/494 (43%), Gaps = 68/494 (13%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
LG+C+ A++ G A++ ++ +Y G + A VFD++ +
Sbjct: 112 LGRCLHGLAVKVGYADGAVV----------AKAVMDMYGRIGSLADAHTVFDEMSCSDAV 161
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLMREFIYR------CNKFTFSIVLKACVGLLDIKKGK 133
N ++ AS+ G + + F L R + T ++VL C L ++ G+
Sbjct: 162 CRNILITASSRAGLYNDV---FHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGR 218
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCG---LLCSARRVFHGMFERDVVSWTSMISGYC 190
+H + G E D GNAL+ MY+KCG + A F + +DVVSW S+I+GY
Sbjct: 219 SIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGYS 278
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA-----SYARR------------------ 227
+EA+ LF +M E PN T ++ Y R
Sbjct: 279 ENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDI 338
Query: 228 GDSNAAFAFFSRMTAEGFVP---------DLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
SNA A +S++ V D+VTWN +I+G+ ++ + ALKLF+G+L +
Sbjct: 339 SVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFA 398
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS----ALIDMYSKCGS 334
G+ P++V++ +L A G++++G +H + R H ++ + AL+ YS+C
Sbjct: 399 GMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFR---HPELLQETSLMNALVSFYSQCDR 455
Query: 335 LKDARTLFEITRIKNVASWNAMI-GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
A F + K+ SWNA++ C ++ L M + + + VT+++++
Sbjct: 456 FDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIR 515
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MY 450
+ G+ K ++ R G ++D + G + +A L R + +
Sbjct: 516 MSTFCGI--KMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIV 573
Query: 451 VTNSMAGAF-RNGC 463
N+M + +N C
Sbjct: 574 TGNTMISCYLKNNC 587
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 183/388 (47%), Gaps = 55/388 (14%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI---YRCNKFTFSIVLKACVG 125
VFD +P + M ++ G + G SL+R + R N+ + +K+
Sbjct: 45 VFDAVPALDDRMRCSALLRERAVGG--DHYGCTSLLRWMLARGLRPNRLALAAAVKSSSA 102
Query: 126 LLDIKKG----KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS 181
L D + G + +H +A ++G+ + V A++DMY + G L A VF M D V
Sbjct: 103 LPDCRGGAALGRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFDEMSCSDAVC 162
Query: 182 WTSMISG------YCNV---------SKVDE--------AVVLFERMKLE---------- 208
+I+ Y +V S VDE AVVL KL
Sbjct: 163 RNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHG 222
Query: 209 -----GLEPNQFTYNAIIASYARRGDSNA---AFAFFSRMTAEGFVPDLVTWNAMISGFA 260
GLE + + NA+++ YA+ G S A A FS + + D+V+WN++I+G++
Sbjct: 223 YVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCK----DVVSWNSIIAGYS 278
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG-SIQIGREIHALVCRMGLHIDV 319
++ EAL LF M+ PN T+ VL L G+EIH V R GL +D+
Sbjct: 279 ENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDI 338
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+AL+ YSK ++ ++F +++ ++ +WN +I Y + +++LF+ +L
Sbjct: 339 SVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFA 398
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEI 407
GM + V+LIS+L+AC+ G + G+ +
Sbjct: 399 GMAPDSVSLISLLTACAQVGNLRVGIRV 426
>gi|218190515|gb|EEC72942.1| hypothetical protein OsI_06806 [Oryza sativa Indica Group]
Length = 1030
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 165/533 (30%), Positives = 276/533 (51%), Gaps = 50/533 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C + LR G +VH + + L SL + LV Y+ C ++A F I N
Sbjct: 410 LLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITIQNK 469
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQ 134
+ ++W + SA + +F L+ E + ++ +L IK ++
Sbjct: 470 DS--VSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIRMSTFCGIKMVQE 527
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H + ++G+ D SV NA++D Y+KCG L A +F + R++V+ +MIS Y +
Sbjct: 528 SHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNC 587
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
V++A + F M + DL TWN
Sbjct: 588 VEDAEMTFNHMAEK---------------------------------------DLTTWNL 608
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M +AQ+ ++A LF + G+ P+ +++T +L A S+Q+ ++ H + R
Sbjct: 609 MSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRAS 668
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L D+ AL+D YSKCG++ +A LF+++ K++ + AMIG Y HGM + ++ELF
Sbjct: 669 LE-DIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFS 727
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
+ML ++ + V L ++LSACSH GLV+ G++IF+S++E YGV+ ++EH AC+VD+L RS
Sbjct: 728 KMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARS 787
Query: 435 GRMVEAYDLLRQVPMYVTNSMA-GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
GR+ +AY +P +V N+ A G+ C +HG + + F M +V++
Sbjct: 788 GRLQDAYSFALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVIM 847
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFVEKEVQNESK 543
SNI AAD +W E++RK+MK K+++K G S +E R+ FV +VQ++ +
Sbjct: 848 SNIFAADDKWESVEHVRKLMKSKDMKKPAGCSWIEVEKTRHLFVASDVQHQDR 900
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 141/554 (25%), Positives = 244/554 (44%), Gaps = 84/554 (15%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGD---VNSARLVFDKIP 74
+L C K + LR G+ +H + L +L + LV +YA CG ++ A L F I
Sbjct: 204 VLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTIC 263
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK--G 132
+V N ++ + G F+EA+ F M N T + VL C L++ + G
Sbjct: 264 CKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFC-SLVEYGRHYG 322
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
K++H + G E D+SV NAL+ YSK + + +F D+V+W ++I+GY
Sbjct: 323 KEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMN 382
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----------------------- 229
A+ LF+ + G+ P+ + +++ + A+ G+
Sbjct: 383 RYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSL 442
Query: 230 SNAAFAFFS---RMTA--EGFVP----DLVTWNAMISGFAQSKRENEA-LKLFKGMLVSG 279
NA +F+S R A F+ D V+WNA++S A S+ E +L M
Sbjct: 443 MNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWHDV 502
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ ++VT+ +++ G I++ +E H R+G D +A++D Y+KCG L DA
Sbjct: 503 TQWDSVTILNIIRMSTFCG-IKMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAE 561
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMV-------------------------------DS 368
TLF +N+ + N MI CY K+ V D
Sbjct: 562 TLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQ 621
Query: 369 SIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
+ LF ++ EG+ + +++ ++LSAC H V+ + M I E ++
Sbjct: 622 AFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASLEDIHLE--GALL 679
Query: 429 DMLCRSGRMVEAYDLLRQVPMY----VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
D + G + AY+L QV ++ + +M GA+ +HG + AV + + + +
Sbjct: 680 DAYSKCGNIANAYNLF-QVSLHKDLVIFTAMIGAY----AMHGMAEKAVELFSKMLTLDI 734
Query: 485 RKPDGFVMLSNICA 498
KPD V+ + + A
Sbjct: 735 -KPDHVVLTALLSA 747
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 216/494 (43%), Gaps = 68/494 (13%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
LG+C+ A++ G A++ ++ +Y G + A VFD++ +
Sbjct: 112 LGRCLHGLAVKVGYADGAVV----------AKAVMDMYGRIGSLADAHTVFDEMSCSDAV 161
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLMREFIYR------CNKFTFSIVLKACVGLLDIKKGK 133
N ++ AS+ G + + F L R + T ++VL C L ++ G+
Sbjct: 162 CRNILITASSRAGLYNDV---FHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGR 218
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCG---LLCSARRVFHGMFERDVVSWTSMISGYC 190
+H + G E D GNAL+ MY+KCG + A F + +DVVSW S+I+GY
Sbjct: 219 SIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGYS 278
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA-----SYARR------------------ 227
+EA+ LF +M E PN T ++ Y R
Sbjct: 279 ENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDI 338
Query: 228 GDSNAAFAFFSRMTAEGFVP---------DLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
SNA A +S++ V D+VTWN +I+G+ ++ + ALKLF+G+L +
Sbjct: 339 SVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFA 398
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS----ALIDMYSKCGS 334
G+ P++V++ +L A G++++G +H + R H ++ + AL+ YS+C
Sbjct: 399 GMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFR---HPELLQETSLMNALVSFYSQCDR 455
Query: 335 LKDARTLFEITRIKNVASWNAMI-GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
A F + K+ SWNA++ C ++ L M + + + VT+++++
Sbjct: 456 FDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIR 515
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MY 450
+ G+ K ++ R G ++D + G + +A L R + +
Sbjct: 516 MSTFCGI--KMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIV 573
Query: 451 VTNSMAGAF-RNGC 463
N+M + +N C
Sbjct: 574 TGNTMISCYLKNNC 587
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 183/388 (47%), Gaps = 55/388 (14%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI---YRCNKFTFSIVLKACVG 125
VFD +P + M ++ G + G SL+R + R N+ + +K+
Sbjct: 45 VFDAVPALDDRMRCSALLRERAVGG--DHYGCTSLLRWMLARGLRPNRLALAAAVKSSSA 102
Query: 126 LLDIKKG----KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS 181
L D + G + +H +A ++G+ + V A++DMY + G L A VF M D V
Sbjct: 103 LPDCRGGAALGRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFDEMSCSDAVC 162
Query: 182 WTSMISG------YCNV---------SKVDE--------AVVLFERMKLE---------- 208
+I+ Y +V S VDE AVVL KL
Sbjct: 163 RNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHG 222
Query: 209 -----GLEPNQFTYNAIIASYARRGDSNA---AFAFFSRMTAEGFVPDLVTWNAMISGFA 260
GLE + + NA+++ YA+ G S A A FS + + D+V+WN++I+G++
Sbjct: 223 YVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCK----DVVSWNSIIAGYS 278
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG-SIQIGREIHALVCRMGLHIDV 319
++ EAL LF M+ PN T+ VL L G+EIH V R GL +D+
Sbjct: 279 ENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDI 338
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+AL+ YSK ++ ++F +++ ++ +WN +I Y + +++LF+ +L
Sbjct: 339 SVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFA 398
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEI 407
GM + V+LIS+L+AC+ G + G+ +
Sbjct: 399 GMAPDSVSLISLLTACAQVGNLRVGIRV 426
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 174/604 (28%), Positives = 286/604 (47%), Gaps = 104/604 (17%)
Query: 29 LRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
+R VH L+ L L + L+ YA G + AR VFD++P+PN+F N ++
Sbjct: 28 VRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLS 87
Query: 87 ASAF-------------------------------TGNFQEAIG-YFSLMREFIYRCNKF 114
A A TG+ ++ Y +L+RE R +
Sbjct: 88 ALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRI 147
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH-- 172
T S ++ L D G VH ++GF VG+ L+DMY+K GL+ ARRVF
Sbjct: 148 TLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM 207
Query: 173 -------------------------GMFE----RDVVSWTSMISGYCNVSKVDEAVVLFE 203
G+F+ RD ++WT+M++G EA+ +F
Sbjct: 208 EAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFR 267
Query: 204 RMKLEGLEPNQFTYNAIIAS-----------------------------------YARRG 228
RM+ EG+ +Q+T+ +I+ + Y++
Sbjct: 268 RMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCR 327
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
A A F RMT ++++W AMI G+ Q+ EA++ F M + GIKP++ T+
Sbjct: 328 SIRLAEAVFRRMTCR----NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLG 383
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
V+ + S++ G + H L GL + +AL+ +Y KCGS++DA LF+
Sbjct: 384 SVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH 443
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+ SW A++ Y + G +I+LFE+ML G++ + VT I VLSACS GLVEKG + F
Sbjct: 444 DQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYF 503
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
SM++ +G+ +HY C++D+ RSGR EA + ++Q+P + C + G
Sbjct: 504 DSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGN 563
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
++ E E + P +V+L ++ AA G+W E +LR+ M+++ V+K+PG S ++
Sbjct: 564 MEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIK 623
Query: 529 KRNE 532
+N+
Sbjct: 624 YKNK 627
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 150/291 (51%), Gaps = 11/291 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C AL +GKQ+HA + + N+F + S LV +Y+ C + A VF ++
Sbjct: 284 ILTACGALAALEEGKQIHAYITRTWYEDNVF-VGSALVDMYSKCRSIRLAEAVFRRMTCR 342
Query: 77 NVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N+ ++W M + N +EA+ FS M+ + + FT V+ +C L +++G Q
Sbjct: 343 NI--ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H +A G ++V NAL+ +Y KCG + A R+F M D VSWT++++GY K
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWN 253
E + LFE+M GL+P+ T+ ++++ +R G +F M + G VP +
Sbjct: 461 AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYT 520
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
MI +++S R EA + K M S P+ +L + L G+++IG+
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHS---PDAFGWATLLSSCRLRGNMEIGK 568
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 164/550 (29%), Positives = 290/550 (52%), Gaps = 43/550 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C S ++QG +HA + + +N+F + + L+ +YA G + A +F + + +
Sbjct: 289 LQACEDSSFIKQGMFIHATVLKSSYYINVF-VANALIAMYARFGKMGEAANIFYNMDDWD 347
Query: 78 VFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
++W M S F N + EA+ ++ MR+ + + ++ A + G Q+
Sbjct: 348 T--ISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQI 405
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARR---VFHGMFERDVVSWTSMISGYCNV 192
HA A + G ++D+ VGN+L+DMY+K CS + +F M ++DVVSWT++I+G+
Sbjct: 406 HAYAMKNGLDSDLQVGNSLVDMYAK---FCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQN 462
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAI---------------IASYA-RRGDSNAAFA- 235
A+ LF ++LEG++ + ++I I SY R+G S+
Sbjct: 463 GSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQN 522
Query: 236 -------------FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+ +RM D+V+W +MIS + + NEAL+LF M +G++P
Sbjct: 523 GIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEP 582
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+++++ +L A +++ G+EIH + R G ++ S L+DMY++CG+L+ +R +F
Sbjct: 583 DSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVF 642
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
R K++ W +MI YG HG ++I+LF RM +E + + + ++VL ACSH GL+
Sbjct: 643 NFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMN 702
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G SMK Y ++ EHYAC+VD+L R+ + EAY ++ + + T + A
Sbjct: 703 EGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGA 762
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IH ++L ++ EM P +V++SN+ +A+ W + E +R MK ++K P
Sbjct: 763 CQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNP 822
Query: 523 GFSRVEKRNE 532
G S +E N+
Sbjct: 823 GCSWIEVGNK 832
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/444 (32%), Positives = 225/444 (50%), Gaps = 55/444 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C KAL +G+QVHA + T++ N L ++LV +Y CG + A +FD +P+
Sbjct: 84 VLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHK 143
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR---CNKFTFSIVLKACVGLLDIKKGK 133
+F N M+ A G E +G L RE + TF +LKAC L D + G
Sbjct: 144 TIFTWNAMIGAYVTNG---EPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGA 200
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER-DVVSWTSMISGYCNV 192
+VH +A + G+ + V V N+++ MY+KC L AR++F M E+ DVVSW SMIS Y +
Sbjct: 201 EVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 260
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTY----------------------------------- 217
+ EA+ LF M+ L PN +T+
Sbjct: 261 GQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVA 320
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
NA+IA YAR G A F M D ++WN+M+SGF Q+ +EAL+ + M
Sbjct: 321 NALIAMYARFGKMGEAANIFYNMDDW----DTISWNSMLSGFVQNGLYHEALQFYHEMRD 376
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
+G KP+ V V ++ A +G+ G +IHA + GL D+ G++L+DMY+K S+K
Sbjct: 377 AGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKY 436
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+F+ K+V SW +I + ++G ++ELF + EG+ + + + S+L ACS
Sbjct: 437 MDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS- 495
Query: 398 GGLVEKGLEIFRSMKERYGVKISK 421
GL++ S+KE + I K
Sbjct: 496 ------GLKLISSVKEIHSYIIRK 513
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/548 (28%), Positives = 273/548 (49%), Gaps = 54/548 (9%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C K R G +VH L ++I + + +VG+Y C D+N AR +FD++P
Sbjct: 185 CILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEK 244
Query: 77 NVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+++W M SA++ N Q EA+ F M++ N +TF L+AC IK+G
Sbjct: 245 ED-VVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMF 303
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+HA + + +V V NALI MY++ G + A +F+ M + D +SW SM+SG+
Sbjct: 304 IHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGL 363
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS----------------------NA 232
EA+ + M+ G +P+ +IIA+ AR G++ N+
Sbjct: 364 YHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNS 423
Query: 233 AFAFFSRMTAEGFV---------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+++ + ++ D+V+W +I+G AQ+ + AL+LF+ + + GI +
Sbjct: 424 LVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLD 483
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+ ++ +L A I +EIH+ + R GL D+ + ++D+Y +CG++ A +FE
Sbjct: 484 VMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFE 542
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ K+V SW +MI CY +G+ + ++ELF M E G+ + ++L+S+LSA + ++K
Sbjct: 543 LIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKK 602
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF- 459
G EI R G + + +VDM R G + ++ ++ +R + + SM A+
Sbjct: 603 GKEI-HGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYG 661
Query: 460 RNGCNIHGRR--DLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMK- 514
+GC GR DL M +E PD FV + C+ G +E + MK
Sbjct: 662 MHGC---GRAAIDLFRRMEDESI-----APDHIAFVAVLYACSHSGLMNEGRRFLESMKY 713
Query: 515 EKNVQKQP 522
E ++ P
Sbjct: 714 EYQLEPWP 721
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 159/329 (48%), Gaps = 39/329 (11%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHA-VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
+S VL+ C + +G+QVHA + T N V + L+ MY KCG L A ++F G
Sbjct: 80 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 139
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------- 217
M + + +W +MI Y + ++ L+ M++ G+ + T+
Sbjct: 140 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYG 199
Query: 218 -------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
N+I+ Y + D N A F RM + D+V+WN+MIS
Sbjct: 200 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEK---EDVVSWNSMISA 256
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
++ + + EAL+LF M + + PN T LQA + I+ G IHA V + +I+
Sbjct: 257 YSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYIN 316
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
VF +ALI MY++ G + +A +F + SWN+M+ + ++G+ +++ + M +
Sbjct: 317 VFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRD 376
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEI 407
G + + V +IS+++A + G G++I
Sbjct: 377 AGQKPDLVAVISIIAASARSGNTLHGMQI 405
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 134/271 (49%), Gaps = 5/271 (1%)
Query: 10 NLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
+L V + +L C K + K++H+ + L+ L++ +V VY CG+V+ A +
Sbjct: 481 DLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARM 540
Query: 70 FDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
F+ I +V ++W M S + N EA+ F LM+E + + +L A L
Sbjct: 541 FELIEFKDV--VSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLS 598
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+KKGK++H + GF + S+ + L+DMY++CG L +R VF+ + +D+V WTSMI+
Sbjct: 599 ALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMIN 658
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFV 246
Y A+ LF RM+ E + P+ + A++ + + G N F M E
Sbjct: 659 AYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLE 718
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
P + ++ ++ EA + KGM V
Sbjct: 719 PWPEHYACLVDLLGRANHLEEAYQFVKGMEV 749
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/550 (29%), Positives = 289/550 (52%), Gaps = 43/550 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C S ++QG +HA + + +N+F + + L+ +YA G + A +F + + +
Sbjct: 325 LQACEDSSFIKQGMFIHATVLKSSYYINVF-VANALIAMYARFGKMGEAANIFYNMDDWD 383
Query: 78 VFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
++W M S F N + EA+ ++ MR+ + + ++ A + G Q+
Sbjct: 384 T--ISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQI 441
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARR---VFHGMFERDVVSWTSMISGYCNV 192
HA A + G ++D+ VGN+L+DMY+K CS + +F M ++DVVSWT++I+G+
Sbjct: 442 HAYAMKNGLDSDLQVGNSLVDMYAK---FCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQN 498
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAI---------------IASYA-RRGDSNAAFA- 235
A+ LF ++LEG++ + ++I I SY R+G S+
Sbjct: 499 GSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQN 558
Query: 236 -------------FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+ +RM D+V+W +MIS + + NEAL+LF M +G++P
Sbjct: 559 GIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEP 618
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+++++ +L A +++ G+EIH + R G ++ S L+DMY++CG+L+ +R +F
Sbjct: 619 DSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVF 678
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
R K++ W +MI YG HG ++I+LF RM +E + + + ++VL ACSH GL+
Sbjct: 679 NFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMN 738
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G SMK Y ++ EHY C+VD+L R+ + EAY ++ + + T + A
Sbjct: 739 EGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGA 798
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IH ++L ++ EM P +V++SN+ AA+ W + E +R MK ++K P
Sbjct: 799 CQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNP 858
Query: 523 GFSRVEKRNE 532
G S +E N+
Sbjct: 859 GCSWIEVGNK 868
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/444 (32%), Positives = 225/444 (50%), Gaps = 55/444 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C KAL +G+QVHA + T++ N L ++LV +Y CG + A +FD +P+
Sbjct: 120 VLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHK 179
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR---CNKFTFSIVLKACVGLLDIKKGK 133
+F N M+ A G E +G L RE + TF +LKAC L D + G
Sbjct: 180 TIFTWNAMIGAYVTNG---EPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGA 236
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER-DVVSWTSMISGYCNV 192
+VH +A + G+ + V V N+++ MY+KC L AR++F M E+ DVVSW SMIS Y +
Sbjct: 237 EVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 296
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTY----------------------------------- 217
+ EA+ LF M+ L PN +T+
Sbjct: 297 GQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVA 356
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
NA+IA YAR G A F M D ++WN+M+SGF Q+ +EAL+ + M
Sbjct: 357 NALIAMYARFGKMGEAANIFYNMDDW----DTISWNSMLSGFVQNGLYHEALQFYHEMRD 412
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
+G KP+ V V ++ A +G+ G +IHA + GL D+ G++L+DMY+K S+K
Sbjct: 413 AGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKY 472
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+F+ K+V SW +I + ++G ++ELF + EG+ + + + S+L ACS
Sbjct: 473 MDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS- 531
Query: 398 GGLVEKGLEIFRSMKERYGVKISK 421
GL++ S+KE + I K
Sbjct: 532 ------GLKLISSVKEIHSYIIRK 549
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/548 (28%), Positives = 273/548 (49%), Gaps = 54/548 (9%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C K R G +VH L ++I + + +VG+Y C D+N AR +FD++P
Sbjct: 221 CILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEK 280
Query: 77 NVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+++W M SA++ N Q EA+ F M++ N +TF L+AC IK+G
Sbjct: 281 ED-VVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMF 339
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+HA + + +V V NALI MY++ G + A +F+ M + D +SW SM+SG+
Sbjct: 340 IHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGL 399
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS----------------------NA 232
EA+ + M+ G +P+ +IIA+ AR G++ N+
Sbjct: 400 YHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNS 459
Query: 233 AFAFFSRMTAEGFV---------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+++ + ++ D+V+W +I+G AQ+ + AL+LF+ + + GI +
Sbjct: 460 LVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLD 519
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+ ++ +L A I +EIH+ + R GL D+ + ++D+Y +CG++ A +FE
Sbjct: 520 VMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFE 578
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ K+V SW +MI CY +G+ + ++ELF M E G+ + ++L+S+LSA + ++K
Sbjct: 579 LIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKK 638
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF- 459
G EI R G + + +VDM R G + ++ ++ +R + + SM A+
Sbjct: 639 GKEI-HGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYG 697
Query: 460 RNGCNIHGRR--DLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMK- 514
+GC GR DL M +E PD FV + C+ G +E + MK
Sbjct: 698 MHGC---GRAAIDLFRRMEDESI-----APDHIAFVAVLYACSHSGLMNEGRRFLESMKY 749
Query: 515 EKNVQKQP 522
E ++ P
Sbjct: 750 EYQLEPWP 757
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 159/329 (48%), Gaps = 39/329 (11%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHA-VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
+S VL+ C + +G+QVHA + T N V + L+ MY KCG L A ++F G
Sbjct: 116 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 175
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------- 217
M + + +W +MI Y + ++ L+ M++ G+ + T+
Sbjct: 176 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCG 235
Query: 218 -------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
N+I+ Y + D N A F RM + D+V+WN+MIS
Sbjct: 236 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEK---EDVVSWNSMISA 292
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
++ + + EAL+LF M + + PN T LQA + I+ G IHA V + +I+
Sbjct: 293 YSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYIN 352
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
VF +ALI MY++ G + +A +F + SWN+M+ + ++G+ +++ + M +
Sbjct: 353 VFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRD 412
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEI 407
G + + V +IS+++A + G G++I
Sbjct: 413 AGQKPDLVAVISIIAASARSGNTLNGMQI 441
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 136/275 (49%), Gaps = 13/275 (4%)
Query: 10 NLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
+L V + +L C K + K++H+ + L+ L++ +V VY CG+V+ A +
Sbjct: 517 DLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARM 576
Query: 70 FDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
F+ I +V ++W M S + N EA+ F LM+E + + +L A L
Sbjct: 577 FELIEFKDV--VSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLS 634
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+KKGK++H + GF + S+ + L+DMY++CG L +R VF+ + +D+V WTSMI+
Sbjct: 635 ALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMIN 694
Query: 188 GY----CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE 243
Y C + +D LF RM+ E + P+ + A++ + + G N F M E
Sbjct: 695 AYGMHGCGRAAID----LFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYE 750
Query: 244 -GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
P + ++ ++ EA + KGM V
Sbjct: 751 YQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEV 785
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 182/596 (30%), Positives = 284/596 (47%), Gaps = 72/596 (12%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNS- 65
PI + + N +L K K+L KQ+HA + +N L S L + +N
Sbjct: 6 PIASTAAN---TILEKLSFCKSLNHIKQLHAHILRTVIN-HKLNSFLFNLSVSSSSINLS 61
Query: 66 -ARLVFDKIPNP-NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
A VF IP+P + N + + + + I ++ +R R ++F+F +LKA
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+ + +G ++H VA ++ D V +DMY+ CG + AR VF M RDVV+W
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT---------------YN---------- 218
+MI YC VDEA LFE MK + P++ YN
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 219 ----------AIIASYARRGDSNAAFAFFSRMTAEGFV---------------------- 246
A++ YA G + A FF +M+
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 247 -----PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
DLV W MIS + +S EAL++F+ M SGIKP+ V++ V+ A G +
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
+ +H+ + GL ++ +ALI+MY+KCG L R +FE +NV SW++MI
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
HG ++ LF RM +E + NEVT + VL CSH GLVE+G +IF SM + Y +
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 422 EHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFE 481
EHY C+VD+ R+ + EA +++ +P+ + G+ + C IHG +L + E
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Query: 482 MGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFV 534
+ V++SNI A + W + N+R++M+EKNV K+ G SR++ K +EF+
Sbjct: 542 LEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFL 597
>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/526 (32%), Positives = 281/526 (53%), Gaps = 49/526 (9%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SL 103
++F + S ++ +++ G ++ AR+VFD+ N N + N M++A EAI F
Sbjct: 257 DVFVVSSAIL-MFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQA 315
Query: 104 MREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
+ C+ T VL A L IK +Q HA + + + + NA++ MYS+C
Sbjct: 316 LESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNH 375
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
+ ++ +VF M ERD VSW ++IS + +EA++L M+ + + T A++++
Sbjct: 376 VDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSA 435
Query: 224 ----------------------------------YARRGDSNAAFAFFSRMTAEGFVPDL 249
YA+ G A F + + D
Sbjct: 436 ASNLRNLYVGKQTHAYLIRRGIQFEGMESYLIDMYAKSGSIRTAELLFEQNCSSD--RDQ 493
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
TWNA+I+G+ Q+ +A+ L K MLV + PN VT+ +L A GS+ + R++H
Sbjct: 494 ATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQLHGF 553
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
R L +V+ G++L D YSKCG++ A +F T KN ++ M+ CYG+HGM +
Sbjct: 554 SIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRA 613
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+ L++ ML G+R + VT +++LSAC++ GLV++GL+IF SM++ + +K S EHY CV D
Sbjct: 614 LTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCVAD 673
Query: 430 MLCRSGRMVEAYDLLRQV-----PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
ML R GR+VEAY+ ++ + M + S+ G+ RN HG +L + ++ MG+
Sbjct: 674 MLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRN----HGHFELGKAVAKKLLNMGM 729
Query: 485 -RKPDGF-VMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
++ G+ V+LSNI A +GEW + + +RK MKEK + K+ G S VE
Sbjct: 730 DKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETGCSWVE 775
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 147/560 (26%), Positives = 241/560 (43%), Gaps = 84/560 (15%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLV-----GVYAGCGDVNSARLVFDKIP 74
L C +K + GK +H+ + N + S++V +YA C A VFD +
Sbjct: 124 LKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNVFDVMR 182
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
NV N ++++ + +A+ F+ M + TF + A L D + K
Sbjct: 183 RRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKM 242
Query: 135 VHAVATQMG--FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY--- 189
+ + G + +DV V ++ I M+S G + AR VF ++ W +MI Y
Sbjct: 243 FYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQN 302
Query: 190 -CNVSKVD----------------------EAVVLFERMKLEGLEPNQF----------- 215
C V +D AV +++KL QF
Sbjct: 303 NCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLA----EQFHAFVIKSLPGS 358
Query: 216 ---TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLF 272
NA++ Y+R + + F +M D V+WN +IS F Q+ + EAL L
Sbjct: 359 LIIILNAVMVMYSRCNHVDTSLKVFDKMLER----DAVSWNTIISAFVQNGFDEEALMLV 414
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG--SALIDMYS 330
M ++VT T +L A ++ +G++ HA + R G+ F G S LIDMY+
Sbjct: 415 CEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQ---FEGMESYLIDMYA 471
Query: 331 KCGSLKDARTLFE--ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
K GS++ A LFE + ++ A+WNA+I Y ++G+ + +I L ++ML + + N VTL
Sbjct: 472 KSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTL 531
Query: 389 ISVLSACSHGGLVE-----KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
S+L ACS G + G I R +++ V S + D + G + A ++
Sbjct: 532 ASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTS------LTDTYSKCGAISYAENV 585
Query: 444 LRQVPMYVTNSMAGAFRNGC-NIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNICAAD 500
+ P NS+ C HG A+T+ + G+R PD FV + + C
Sbjct: 586 FLRTPE--KNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIR-PDAVTFVAILSACNYS 642
Query: 501 GEWHEA----ENLRKIMKEK 516
G E E++ K+ K K
Sbjct: 643 GLVDEGLQIFESMEKVHKIK 662
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 189/439 (43%), Gaps = 69/439 (15%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKF---TFS 117
G + A + D +P P+ + N +++ +A+ ++ MR C+ F TFS
Sbjct: 63 GQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSN-SSCSTFDPYTFS 121
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVS----VGNALIDMYSKCGLLCSARRVFHG 173
LKAC DI GK +H+ + + V N+L++MY+ C A VF
Sbjct: 122 STLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQHE-YALNVFDV 180
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA 233
M R+VV+W ++I + +++ +AV F M + + P+ T+ + + ++ GDS
Sbjct: 181 MRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTV 240
Query: 234 FAF--FSRMTAEGFVPDLVT-------------------------------WNAMISGFA 260
F F R + +V D+ WN MI +
Sbjct: 241 KMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYV 300
Query: 261 QSKRENEALKLFKGMLVS--GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
Q+ EA+ +F L S G+ ++VT+ VL A I++ + HA V +
Sbjct: 301 QNNCPVEAIDVFIQALESEEGV-CDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSL 359
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+ +A++ MYS+C + + +F+ ++ SWN +I + ++G + ++ L M +
Sbjct: 360 IIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQK 419
Query: 379 EGMRANEVTLISVLSACS-----------HGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+ + VT ++LSA S H L+ +G++ F M E Y +
Sbjct: 420 QKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQ-FEGM-ESY-----------L 466
Query: 428 VDMLCRSGRMVEAYDLLRQ 446
+DM +SG + A L Q
Sbjct: 467 IDMYAKSGSIRTAELLFEQ 485
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 7/301 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL + L GKQ HA L + ++S L+ +YA G + +A L+F++ + +
Sbjct: 432 LLSAASNLRNLYVGKQTHAYLIRRGIQFEGMESYLIDMYAKSGSIRTAELLFEQNCSSDR 491
Query: 79 FMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
W + + +T N ++AI M N T + +L AC + + +Q+H
Sbjct: 492 DQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQLH 551
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ + E +V VG +L D YSKCG + A VF E++ V++T+M+ Y
Sbjct: 552 GFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGK 611
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM-TAEGFVPDLVTWNAM 255
A+ L++ M G+ P+ T+ AI+++ G + F M P + + +
Sbjct: 612 RALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCV 671
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT-GSIQIGREIHALVCRMG 314
+ R EA + KG+ G N + + G L G ++G+ + + MG
Sbjct: 672 ADMLGRVGRVVEAYEFVKGL---GEDANTMEIWGSLLGSCRNHGHFELGKAVAKKLLNMG 728
Query: 315 L 315
+
Sbjct: 729 M 729
>gi|225432410|ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 173/583 (29%), Positives = 282/583 (48%), Gaps = 96/583 (16%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
++F SK+V + A G + SAR +FD++P+ + N M+ + + G Q+A+ F M
Sbjct: 4 HLFQTTSKIVAL-AKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHM 62
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC--- 161
R R ++FTF+ L AC GL ++++G ++HA G ++ + VGN+LIDMY KC
Sbjct: 63 RIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSA 122
Query: 162 ----------------------------GLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
GL AR VF GM ++ ++W MISGY
Sbjct: 123 TSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCG 182
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIAS----------YARRG------------DSN 231
V+ + LF++M+ + L+P+Q+T++A++ + Y G SN
Sbjct: 183 DVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSN 242
Query: 232 AAFAFFSRMTAEGFVPDL---------VTWNAMISGFAQSKRENEALKLFK--------- 273
+ +F+S++ + V + V+WNAMI + +EA +F+
Sbjct: 243 SILSFYSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVS 302
Query: 274 ----------------------GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
M+ + I+P++ T VL A ++ G+ IH +
Sbjct: 303 WTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSII 362
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
G H V G+ L++MY+KCG ++ + T F+ K++ SWNAM+ G HG ++E
Sbjct: 363 HYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALE 422
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
L+E M+ GM+ ++VT I +L CSH GL+EKG +F SM YG+ EH C+VD+L
Sbjct: 423 LYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLL 482
Query: 432 CRSGRMVEAYDLLRQVPMY--VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
R G + +A +L+ + S+ A C H + +GE +K
Sbjct: 483 GRGGYLAQARELVDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMS 542
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+V+LSN+ G+W EAE +RK M + V+K PG S +E RN+
Sbjct: 543 YVLLSNLYCVSGQWKEAEMVRKTMTDHGVKKMPGCSWIEVRNK 585
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+H +F ++ I +K G + AR LF+ K+ +WNAM+ Y + G+ ++ LF
Sbjct: 1 MHSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFH 60
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
M R + T + LSAC+ G + +G++I
Sbjct: 61 HMRIANSRPDRFTFTATLSACAGLGELRRGMKI 93
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 173/581 (29%), Positives = 276/581 (47%), Gaps = 68/581 (11%)
Query: 19 LLGKCMKSKAL-RQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L+ C +S + +G QVH + T L + + LV Y G V +A+ +F+++P+
Sbjct: 380 LITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDH 439
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV +++ + +GN E + + MR+ N+ TF+ V +C L D G QV
Sbjct: 440 NVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVL 499
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
Q GFE+ VSV N+LI M+S + A VF M E D++SW +MIS Y +
Sbjct: 500 GHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCR 559
Query: 197 EAVVLFERMKLE-----------------------------------GLEPNQFTYNAII 221
E++ F M+ GL+ N N ++
Sbjct: 560 ESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLL 619
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFV------------------------------PDLVT 251
Y+ G S A F MT + PD VT
Sbjct: 620 TLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVT 679
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
WNA+I G A+++ NEA+K +K + GI N +T+ + L ++ G+++H LV
Sbjct: 680 WNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAATANLA-VLEEGQQLHGLVI 738
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
++G D+ +A +DMY KCG + D + ++ SWN +I + +HG + E
Sbjct: 739 KLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARE 798
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
F ML+ G + + VT +S+LSAC+HGGLV++GL + SM +GV EH C++D+L
Sbjct: 799 TFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLL 858
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
RSGR+ A ++++P+ + + C IHG +LA E E+ +V
Sbjct: 859 GRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYV 918
Query: 492 MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ SN+CA G+W + ENLRK M N++KQP S V+ +++
Sbjct: 919 LYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDK 959
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 139/537 (25%), Positives = 240/537 (44%), Gaps = 95/537 (17%)
Query: 45 NIFSLKSKLVGVYA--GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGY 100
N+ S S L+ YA G G + AR VFD++ + N +W M S + G ++EA+G
Sbjct: 305 NVISWTS-LISGYAKHGYGHMAHARYVFDEMRHRN--EASWSTMLSGYVRVGLYEEAVGL 361
Query: 101 FSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMY 158
F M N F + ++ AC G + +G QVH + G DV VG AL+ Y
Sbjct: 362 FCQMWGLGVEPNGFMVASLITACSRSGYM-ADEGFQVHGFVVKTGILGDVYVGTALVHFY 420
Query: 159 SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYN 218
GL+ +A+++F M + +VVSWTS++ GY + E + +++RM+ EG+ NQ T+
Sbjct: 421 GSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFA 480
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVP------------------------------- 247
+ +S D + + GF
Sbjct: 481 TVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNEC 540
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
D+++WNAMIS +A E+L+ F M + N+ T++ +L +++ GR IH
Sbjct: 541 DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIH 600
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
LV ++GL +V + L+ +YS+ G +DA +F+ +++ SWN+M+ CY + G
Sbjct: 601 GLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCL 660
Query: 368 SSIELFERML----------------------------------EEGMRANEVTLISVLS 393
+++ +L E+G+ AN +T++S L+
Sbjct: 661 DGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS-LA 719
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
A ++ ++E+G ++ + + G + +DM + G M +D+L+ +P +
Sbjct: 720 ATANLAVLEEGQQL-HGLVIKLGFESDLHVTNAAMDMYGKCGEM---HDVLKMLPQPINR 775
Query: 454 S------MAGAF-RNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADG 501
S + AF R+GC R E ++G KPD FV L + C G
Sbjct: 776 SRLSWNILISAFARHGCFQKARETF-----HEMLKLG-PKPDHVTFVSLLSACNHGG 826
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 180/382 (47%), Gaps = 68/382 (17%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM---GFENDVSVGNALIDMYSKCGLLCS 166
R + + +L+ C+ D K KQ H + T + GF +D+ + LI Y K G + +
Sbjct: 27 RLDPSLYLKILQLCI---DKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIA 83
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
AR VF GM ER VVSWT+M+SGY + ++A VLF M+ G++ N +A++ +++
Sbjct: 84 ARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKAN----HALVDFHSK 139
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G A F M D+V+WNAMI G+A +++ +F+ ML G+ P+ T
Sbjct: 140 CGKMEDASYLFGTMMER----DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYT 195
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMG-------------------------------L 315
+ VL+A G + I +IH ++ ++G L
Sbjct: 196 LGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGML 255
Query: 316 HIDVFT----------------GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
D+F+ G+ALIDMY+K G ++DA+ F+ KNV SW ++I
Sbjct: 256 KKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISG 315
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
Y KHG + + +E NE + ++LS GL E+ + +F M +G+ +
Sbjct: 316 YAKHGY--GHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQM---WGLGV 370
Query: 420 SKEHY--ACVVDMLCRSGRMVE 439
+ A ++ RSG M +
Sbjct: 371 EPNGFMVASLITACSRSGYMAD 392
>gi|359492783|ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 272/525 (51%), Gaps = 57/525 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C ++ GK +HA N D ++ + + LV +YA CG+V +R VFD +P
Sbjct: 100 VLKACASLSIVKHGKALHAESIKNGVDFDVM-IGTSLVCMYAKCGNVVDSRKVFDYMPER 158
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N N M+ G+ + A+ F M ++ V ++
Sbjct: 159 NAVTWNAMICGYLGNGDSKSAVLLFEKMS--------------IRTAVTWIE-------- 196
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE--RDVVSWTSMISGYCNVSK 194
+ID +++ G +ARR F + R+VV+WT M+ GY ++
Sbjct: 197 -----------------MIDGFARSGDTETARRFFDDVPSELRNVVTWTVMVDGYARNAE 239
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
++ A +FE M + N F ++++I+ Y ++G+ A + F R+ V +LV WN+
Sbjct: 240 MEAAREVFEGMP----QRNFFAWSSMISGYCKKGNVKEARSIFDRIP----VRNLVNWNS 291
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
+ISG+AQ+ EAL+ F M G +P+ VT+ VL A G + G++IH ++ G
Sbjct: 292 LISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKG 351
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+ ++ F + L+DMY+KCG L +AR +FE +N A WN+MI + HG ++E F
Sbjct: 352 IKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFG 411
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
RM + +E+T +SVLSAC+HGG V GLEIF M E+YG+ +HY C++D+L R+
Sbjct: 412 RMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFSRM-EKYGLTTGIKHYGCLIDLLGRA 470
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG----F 490
GR+ EAYDL++++P+ + + GA C +H ++A + EE ++ G +
Sbjct: 471 GRIKEAYDLIKRMPVKPNDVVWGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHY 530
Query: 491 VMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
V+LSNI AA W +AE +R M K QK G S + N E
Sbjct: 531 VLLSNIYAASDRWEKAEKMRMEMANKGFQKTSGCSSIMPGNNTHE 575
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 8/203 (3%)
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
P L W +I + EAL ++ G+ G+ V VL+A ++ G+
Sbjct: 57 TPSLSNWCHLIRSYLSQGAPREALLVYTGLRRKGVYLLGVAPL-VLKACASLSIVKHGKA 115
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
+HA + G+ DV G++L+ MY+KCG++ D+R +F+ +N +WNAMI Y +G
Sbjct: 116 LHAESIKNGVDFDVMIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGD 175
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
S++ LFE+M +R VT I ++ + G E F + ++ +
Sbjct: 176 SKSAVLLFEKM---SIRT-AVTWIEMIDGFARSGDTETARRFFDDVPSELRNVVT---WT 228
Query: 426 CVVDMLCRSGRMVEAYDLLRQVP 448
+VD R+ M A ++ +P
Sbjct: 229 VMVDGYARNAEMEAAREVFEGMP 251
>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g05240
gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
Length = 565
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 289/562 (51%), Gaps = 60/562 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGD---VNSARLVFDKI 73
+L + ++L + Q+H L+ + + N+ L S+L+ C + ++ AR VF+ I
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPL-SRLIDFCTTCPETMNLSYARSVFESI 67
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P+V++ N M+ + + N +A+ ++ M Y + FTF VLKAC GL DI+ G
Sbjct: 68 DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGS 127
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH + GFE ++ V L+ MY CG + RVF + + +VV+W S+ISG+ N +
Sbjct: 128 CVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNN 187
Query: 194 KVDEAVVLFERMKLEGLEPNQFT------------------------------------- 216
+ +A+ F M+ G++ N+
Sbjct: 188 RFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKV 247
Query: 217 -YNAIIAS-----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
+N I+A+ YA+ GD A F M LV+WN++I+G++Q+ EAL
Sbjct: 248 GFNVILATSLIDMYAKCGDLRTARYLFDGMPER----TLVSWNSIITGYSQNGDAEEALC 303
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
+F ML GI P+ VT V++A + G Q+G+ IHA V + G D AL++MY+
Sbjct: 304 MFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYA 363
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLI 389
K G + A+ FE K+ +W +I HG + ++ +F+RM E+G + +T +
Sbjct: 364 KTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYL 423
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
VL ACSH GLVE+G F M++ +G++ + EHY C+VD+L R+GR EA L++ +P+
Sbjct: 424 GVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPV 483
Query: 450 YVTNSMAGAFRNGCNIHGRRDLA---VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
++ GA NGC+IH +L +M E E+G +V+LSNI A G W +
Sbjct: 484 KPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELG---SGIYVLLSNIYAKAGRWADV 540
Query: 507 ENLRKIMKEKNVQKQPGFSRVE 528
+ +R+ MK K V K G S VE
Sbjct: 541 KLIRESMKSKRVDKVLGHSSVE 562
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/495 (30%), Positives = 256/495 (51%), Gaps = 40/495 (8%)
Query: 34 QVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN 93
H + ++F+ S L+ + ++ A VF +I NPN+F+ N + + + +
Sbjct: 35 HAHLIRAHTIFDVFA-ASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKD 93
Query: 94 FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNA 153
++ ++ + + T+ ++KAC + G Q H + GF++DV V N+
Sbjct: 94 PDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNS 153
Query: 154 LIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN 213
L+ MYS G + SA VF + DVVSWTSM++GY
Sbjct: 154 LVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYI----------------------- 190
Query: 214 QFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
+ GD +A F +M + +LVTW+ MISG+A++ ++A++L+
Sbjct: 191 ------------KSGDVTSARKLFDKMPEK----NLVTWSVMISGYAKNSFFDKAIELYF 234
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
+ G+ N + V+ + G++++G H + R + +++ G+AL+DMY++CG
Sbjct: 235 LLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCG 294
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
S+ A +F+ ++ SW +I + HG + ++E F RM + G+ E+T +VLS
Sbjct: 295 SIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLS 354
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
ACSHGGLVE+GLE+F SMK Y ++ EHY C+VD+L R+G++ EA + ++PM
Sbjct: 355 ACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNA 414
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIM 513
+ GA C IH ++A G+ E+ +V+LSNI A +W EN+R++M
Sbjct: 415 PIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMM 474
Query: 514 KEKNVQKQPGFSRVE 528
KE+ V K PG++ E
Sbjct: 475 KERGVVKPPGYTLFE 489
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 6/212 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C AL G++ H + N + + L + LV +YA CG ++ A VFD++P +
Sbjct: 251 VIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRD 310
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV-H 136
++ A G ++A+ YFS M + + TF+ VL AC +++G ++
Sbjct: 311 ALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFE 370
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKV 195
++ E + ++D+ + G L A + + M + + W +++ G C + K
Sbjct: 371 SMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALL-GACRIHKN 429
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIAS-YAR 226
E + +E L+P Y ++++ YAR
Sbjct: 430 SEIAERAGKTLIE-LKPEHSGYYVLLSNIYAR 460
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 173/549 (31%), Positives = 278/549 (50%), Gaps = 43/549 (7%)
Query: 25 KSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGD--------VNSARLVFDKIPN 75
++K++ Q+HA + + L+ +L + V A +N AR F+
Sbjct: 26 RTKSIPTLLQIHAFILRHSLHSNLNLLTAFVTTCASLAASAKRPLAIINHARRFFNATHT 85
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI--YRCNKFTFSIVLKACVGLLDIKKGK 133
+ F+ N M+ A F + F +R + + +TF+ ++K C + +G
Sbjct: 86 RDTFLCNSMIAAHFAARQFSQPFTLFRDLRRQAPPFTPDGYTFTALVKGCATRVATGEGT 145
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+H + + G D+ V AL+DMY K G+L SAR+VF M R VSWT++I GY
Sbjct: 146 LLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKVSWTAVIVGYARCG 205
Query: 194 KVDEAVVLFERMK----------LEGL-----------------EPNQFTYNAIIASYAR 226
+ EA LF+ M+ ++G E N ++ ++++ Y
Sbjct: 206 DMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEMRERNVVSWTSMVSGYCG 265
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
GD A F M + ++ TWNAMI G+ Q++R ++AL+LF+ M + ++PN VT
Sbjct: 266 NGDVENAKLMFDLMPEK----NVFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVT 321
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
V VL A G++ +GR IH R L G+ALIDMY+KCG + A+ FE
Sbjct: 322 VVCVLPAVADLGALDLGRWIHRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMT 381
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+ ASWNA+I + +G ++E+F RM+EEG NEVT+I VLSAC+H GLVE+G
Sbjct: 382 ERETASWNALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGRR 441
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F +M ER+G+ EHY C+VD+L R+G + EA +L++ +P + +F C
Sbjct: 442 WFNAM-ERFGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDANGIILSSFLFACGYF 500
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
A + +E +M +VML N+ A W + E+++++MK++ K+ S
Sbjct: 501 NDVLRAERVLKEVVKMDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKRGTSKEVACSV 560
Query: 527 VEKRNEFVE 535
+E F+E
Sbjct: 561 IEIGGSFIE 569
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/503 (32%), Positives = 260/503 (51%), Gaps = 40/503 (7%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
GDVN A F ++ P++ + N ++ I + M+ N FTF VL
Sbjct: 33 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
KAC G GKQ+H + GF ++V V N+L+ MY+K G + AR VF + +R VV
Sbjct: 93 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 152
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN--------------------------- 213
SWTS+ISGY EA+ +F+ M+ ++P+
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 212
Query: 214 -----QFTYNAIIA---SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
+F + +I+ YA+RG A FF+RM P+L+ WNAMISG+A +
Sbjct: 213 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEK----PNLILWNAMISGYANNGYG 268
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EA+KLF+ M+ I+ +++T+ + A GS+++ R + + + D F + L
Sbjct: 269 EEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGL 328
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
IDMY+KCGS+ AR +F+ K+V W+ MI YG HG +I L+ M + G+ N+
Sbjct: 329 IDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPND 388
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
T I +L+AC + GLV++G E+F M + +G++ +HY+CVVD+L R+G + +AYD +
Sbjct: 389 GTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 447
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
+P+ S+ GA + C IH + L E+ F + +V LSN+ A+ W
Sbjct: 448 SMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTR 507
Query: 506 AENLRKIMKEKNVQKQPGFSRVE 528
N+R +M +K + K G S +E
Sbjct: 508 VANVRLMMTQKGLNKDLGHSSIE 530
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 171/366 (46%), Gaps = 47/366 (12%)
Query: 32 GKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
GKQ+H N+F +++ LV +YA G ++ AR+VFDK+ + V ++W + S
Sbjct: 104 GKQIHGQTFKYGFGSNVF-VQNSLVSMYAKFGQISYARIVFDKLHDRTV--VSWTSIISG 160
Query: 90 FT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ G+ EA+ F MR+ + + V+ A + D+ +GK +H + T++G E +
Sbjct: 161 YVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFE 220
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
+ +L MY+K GL+ AR F+ M + +++ W +MISGY N +EA+ LF M
Sbjct: 221 PDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMIT 280
Query: 208 EGLEPNQFTY-NAIIAS----------------------------------YARRGDSNA 232
+ + + T +A++AS YA+ G
Sbjct: 281 KNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYL 340
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
A F R+ + D+V W+ MI G+ EA+ L+ M +G+ PN+ T G+L
Sbjct: 341 ARCVFDRVADK----DVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLT 396
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK-NVA 351
A +G ++ G E+ L+ G+ S ++D+ + G L A IK V+
Sbjct: 397 ACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVS 456
Query: 352 SWNAMI 357
W A++
Sbjct: 457 VWGALL 462
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 128/281 (45%), Gaps = 14/281 (4%)
Query: 29 LRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L QGK +H L+ L + L +YA G V AR F+++ PN+ + N M+
Sbjct: 202 LGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISG 261
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTF--SIVLKACVGLLDIKKGKQVHAVATQMGFE 145
A G +EAI F M R + T +++ A VG L++ + + ++ +
Sbjct: 262 YANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLEL--ARWLDGYISKSEYR 319
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+D V LIDMY+KCG + AR VF + ++DVV W+ MI GY EA+ L+ M
Sbjct: 320 DDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEM 379
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
K G+ PN T+ ++ + G + F M G P ++ ++ ++
Sbjct: 380 KQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYL 439
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
N+A M IKP GV G L + +I R++
Sbjct: 440 NQAYDFIMSM---PIKP------GVSVWGALLSACKIHRKV 471
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 148/303 (48%), Gaps = 15/303 (4%)
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
++ ++ + GL +F I + GD N A F ++ PD++ WNA+I G+
Sbjct: 6 VYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSE----PDILLWNAIIKGYT 61
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q + ++++ M +S + PN T VL+A G T IG++IH + G +VF
Sbjct: 62 QKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVF 121
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
++L+ MY+K G + AR +F+ + V SW ++I Y ++G ++ +F+ M +
Sbjct: 122 VQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCN 181
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++ + + L+SV++A ++ + +G I + + G++ + + M + G +VE
Sbjct: 182 VKPDWIALVSVMTAYTNVEDLGQGKSI-HGLVTKLGLEFEPDIVISLTTMYAKRG-LVEV 239
Query: 441 ----YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
++ + + + + N+M + N +G + A+ + E +R D M S +
Sbjct: 240 ARFFFNRMEKPNLILWNAMISGYAN----NGYGEEAIKLFREMITKNIR-VDSITMRSAV 294
Query: 497 CAA 499
A+
Sbjct: 295 LAS 297
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 179/558 (32%), Positives = 282/558 (50%), Gaps = 46/558 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL + +LR G Q+HA L + L + L+ +YA CG ++ A VFD +P N
Sbjct: 206 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 265
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V +++ G +E + F MR N+FT S LKAC G + G Q+H
Sbjct: 266 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHG 323
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
V + GFE V N+L+ MYSK ARRVF + R++ +W SMISGY + + +
Sbjct: 324 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 383
Query: 198 AVVLFERMKLEGLE-PNQFTYNAII----------------ASYARRGDSNAAFAFFSRM 240
++++F M+ E P++FT+ +++ A+ A RG S A+ A +
Sbjct: 384 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 443
Query: 241 TAEGFVP-----------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ +V + + W +I G AQ + EA+ LF+ SG++ +
Sbjct: 444 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRAD 503
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
++ V+ ++ G+++H + +DV ++L+DMY KCG +A F
Sbjct: 504 GHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFR 563
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+NV SW AMI GKHG +I+LFE M EG+ A+EV +++LSACSH GLV++
Sbjct: 564 EMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDE 623
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
F + + ++ EHYAC+VD+L R+G + EA +L+ +PM T + + C
Sbjct: 624 CRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSAC 683
Query: 464 NIHGRRDLAV--TMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
+H +D+AV +G+ + P +VMLSNI A GEW E + +R M+ K ++KQ
Sbjct: 684 RVH--KDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQ 741
Query: 522 PGFSRVEKRNEFVEKEVQ 539
G S E V+KEV
Sbjct: 742 GGCSWTE-----VDKEVH 754
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 100/246 (40%), Gaps = 30/246 (12%)
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ +L+A S++ G ++HA + ++G D + LIDMY+KCG L A +F+
Sbjct: 203 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 262
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS---------H 397
+NV SW A++ + HG + LF M G NE TL + L AC H
Sbjct: 263 ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIH 322
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
G V G E + V SK + +G +D++ + NSM
Sbjct: 323 GVCVRTGFEGHDVVANSLVVMYSKGRW---------TGDARRVFDVIPSRNLATWNSMIS 373
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLR---KPDGFVMLS--NICAADGEWHEAENLRKI 512
+ + GR L V F EM R +PD F S C+ G E +
Sbjct: 374 GYAHAG--QGRDSLLV-----FREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAA 426
Query: 513 MKEKNV 518
M + V
Sbjct: 427 MAVRGV 432
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 185/575 (32%), Positives = 289/575 (50%), Gaps = 79/575 (13%)
Query: 25 KSKALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
K L GKQ+H FS + L+ +YA G ++ A+ + + + ++ W
Sbjct: 128 KRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDRD--LVTW 184
Query: 84 MVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA-- 139
M S+F+ N F EA+ + LM + + TF+ VL AC L ++ GK++HA A
Sbjct: 185 NSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALR 244
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
T EN VG+AL+DMY CG + S R VF + +R + W +MI+GY ++A+
Sbjct: 245 TDDVIENSF-VGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKAL 303
Query: 200 VLFERMKL------------------------------------EGLEPNQFTYNAIIAS 223
+LF M+ GLE N++ NA+I
Sbjct: 304 MLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDM 363
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM-------L 276
Y+R GD + F M D+V+WN +I+ + R ++AL L M
Sbjct: 364 YSRMGDIKTSKRIFDSMEDR----DIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKST 419
Query: 277 VSG---------IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
G KPN++T+ VL ++ G+EIHA R L V GSAL+D
Sbjct: 420 YDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVD 479
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-----MR 382
MY+KCG L AR +F+ I+NV +WN +I YG HG S+ELFE M+ EG ++
Sbjct: 480 MYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVK 539
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
EVT I++ ++CSH G+V++GL +F MK +G++ + +HYAC+VD++ R+G++ EAY
Sbjct: 540 PTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYG 599
Query: 443 LLRQVP-----MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
L+ +P + +S+ GA C I+ ++ E ++ +V+LSNI
Sbjct: 600 LVNTMPSGFDKVGAWSSLLGA----CRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIY 655
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
++ G W +A NLR+ MK V+K+PG S +E +E
Sbjct: 656 SSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDE 690
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 177/359 (49%), Gaps = 62/359 (17%)
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN--DVSVGNALIDMYSKCGLLCS 166
+ + F F VLKA G+ ++ GKQ+HA + G+ + V++ N L++MY KCG L
Sbjct: 6 FSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGD 65
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------- 217
A +VF + ERD VSW S+IS C + + A+ F M +EG EP+ FT
Sbjct: 66 AYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSN 125
Query: 218 ----------------------------NAIIASYARRG---DSNAAFAFFSRMTAEGFV 246
NA++A YA+ G D+ + F
Sbjct: 126 LRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR------ 179
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
DLVTWN+MIS F+Q++R EAL + M++ G+KP+ VT VL A ++ G+EI
Sbjct: 180 -DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEI 238
Query: 307 HALVCRMGLHID-VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
HA R I+ F GSAL+DMY CG ++ R +F+ + + WNAMI Y +
Sbjct: 239 HAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEH 298
Query: 366 VDSSIELFERM-LEEGMRANEVTLISVLSA---CS--------HGGLVEKGLEIFRSMK 412
+ ++ LF M G+ +N T+ S++ A C HG ++++GLE R ++
Sbjct: 299 DEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQ 357
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 148/562 (26%), Positives = 250/562 (44%), Gaps = 73/562 (12%)
Query: 27 KALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+ L GKQ+HA + FS + + LV +Y CG + A VFD+I + N
Sbjct: 24 QELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNS 83
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD---IKKGKQVHAVAT 140
++ A ++ AI F LM + + FT + AC L + GKQ+H
Sbjct: 84 IISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCF 143
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ G S NAL+ MY+K G L A+ + +RD+V+W SMIS + + EA++
Sbjct: 144 RKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALM 202
Query: 201 LFERMKLEGLEPNQFTYNAI---------------IASYARRGDSNAAFAFFSRMTAEGF 245
M LEG++P+ T+ ++ I +YA R D +F + +
Sbjct: 203 FLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMY 262
Query: 246 -----------VPDLV------TWNAMISGFAQSKRENEALKLFKGM-LVSGIKPNNVTV 287
V D V WNAMI+G+AQS+ + +AL LF M +G+ N T+
Sbjct: 263 CNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTM 322
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
+ ++ A I IH V + GL + + +ALIDMYS+ G +K ++ +F+
Sbjct: 323 SSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMED 382
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERM--LEE--------------GMRANEVTLISV 391
+++ SWN +I Y G ++ L M +EE + N +TL++V
Sbjct: 383 RDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTV 442
Query: 392 LSACSHGGLVEKGLEIFR-SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM- 449
L C+ + KG EI +++ +++ + +VDM + G + A + Q+P+
Sbjct: 443 LPGCASLSALAKGKEIHAYAIRNLLASQVTVG--SALVDMYAKCGCLNLARRVFDQMPIR 500
Query: 450 --YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR----KPD--GFVMLSNICAADG 501
N + A+ +HG+ ++ + E+ G + KP F+ L C+ G
Sbjct: 501 NVITWNVIIMAY----GMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSG 556
Query: 502 EWHEAENL-RKIMKEKNVQKQP 522
E +L K+ E ++ P
Sbjct: 557 MVDEGLSLFHKMKNEHGIEPAP 578
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 206/465 (44%), Gaps = 74/465 (15%)
Query: 19 LLGKCMKSKALRQGKQVHAL-LCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C LR GK++HA L T+D+ N F + S LV +Y CG V S RLVFD + +
Sbjct: 222 VLPACSHLDLLRTGKEIHAYALRTDDVIENSF-VGSALVDMYCNCGQVESGRLVFDSVLD 280
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREF--IYRCNKFTFSIVLKACVGLLDIKKGK 133
+ + N M+ A + + ++A+ F M +Y N T S ++ A V I + +
Sbjct: 281 RKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYS-NATTMSSIVPAYVRCEGISRKE 339
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+H + G E + + NALIDMYS+ G + +++R+F M +RD+VSW ++I+ Y
Sbjct: 340 GIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICG 399
Query: 194 KVDEAVVLFERM----------------KLEGLEPNQFTY-------------------- 217
+ +A++L M K +PN T
Sbjct: 400 RSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIH 459
Query: 218 ---------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
+A++ YA+ G N A F +M + +++TWN +I +
Sbjct: 460 AYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMP----IRNVITWNVIIMAYGMH 515
Query: 263 KRENEALKLFKGMLVSG-----IKPNNVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLH 316
+ E+L+LF+ M+ G +KP VT + + +G + G + H + G+
Sbjct: 516 GKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIE 575
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEI--TRIKNVASWNAMIG-CYGKHGMVDSSIELF 373
+ ++D+ + G +++A L + V +W++++G C H + I
Sbjct: 576 PAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAE 635
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
+ + A+ L+S + S GL +K + + R MK GVK
Sbjct: 636 NLLQLQPDVASHYVLLSNIY--SSAGLWDKAMNLRRRMKA-MGVK 677
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 105/243 (43%), Gaps = 37/243 (15%)
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL--HIDVFTGSALIDMYSKC 332
M+ SG P+N VL+A + +G++IHA V + G V + L++MY KC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G L DA +F+ ++ SWN++I + + +I+ F ML EG + TL+S+
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC--------------VVDMLCRSGRMV 438
ACS ++++R G+ + K+ + C ++ M + GR+
Sbjct: 121 LACS-------------NLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLD 167
Query: 439 EAYDLL---RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
+A LL + NSM +F R + M + KPDG S
Sbjct: 168 DAKSLLVLFEDRDLVTWNSMISSFS-----QNERFMEALMFLRLMVLEGVKPDGVTFASV 222
Query: 496 ICA 498
+ A
Sbjct: 223 LPA 225
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/420 (34%), Positives = 232/420 (55%), Gaps = 12/420 (2%)
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ C+ + + ++ D+ KQ+ ++ + + DV NA+ID Y K G + R
Sbjct: 31 FECDSYIVNSLIHLYANGKDLGAAKQLFSLCS----DRDVVSWNAMIDGYVKRGEMGHTR 86
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
VF M RDV+SW ++I+GY V K+DEA LF+ M E N ++N++++ + + G
Sbjct: 87 MVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDEMP----ERNLVSWNSMLSGFVKCG 142
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
+ AF FS M D+V+WN+M++ +AQ + NEAL LF M G+KP TV
Sbjct: 143 NVEEAFGLFSEMPCR----DVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVV 198
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
+L A G++ G +H + + ++ G+AL+DMY+KCG + A +F K
Sbjct: 199 SLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESK 258
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+V +WN +I HG V + +LF+ M E + N++T +++LSACSH G+V++G ++
Sbjct: 259 DVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLL 318
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
M YG++ EHY CV+D+L R+G + EA +L+ +PM S GA GC IHG
Sbjct: 319 DCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGN 378
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+L +G+ + +++LSNI AA +W +A +R +MK + K PG S +E
Sbjct: 379 FELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIE 438
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 150/313 (47%), Gaps = 16/313 (5%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N+ S S L G + CG+V A +F ++P +V N M+ A G EA+ F M
Sbjct: 127 NLVSWNSMLSG-FVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQM 185
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
R + + T +L AC L + KG +H E + VG AL+DMY+KCG +
Sbjct: 186 RAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKI 245
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
A +VF+ M +DV++W ++I+G V EA LF+ MK +EPN T+ A++++
Sbjct: 246 SLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSAC 305
Query: 225 ARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ G + M++ G P + ++ +I A++ EA++L M ++PN
Sbjct: 306 SHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTM---PMEPN 362
Query: 284 NVTVTGVLQAGGLTGSIQIG-----REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+ +L + G+ ++G R I+ C G +I L ++Y+ DA
Sbjct: 363 PSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYI------LLSNIYAAAKKWDDA 416
Query: 339 RTLFEITRIKNVA 351
R + + ++ ++
Sbjct: 417 RKVRNLMKVNGIS 429
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 112/239 (46%), Gaps = 17/239 (7%)
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
+T V++A + G +H V + G D + ++LI +Y+ L A+ LF +
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
++V SWNAMI Y K G + + +F+RM+ + ++ ++++ + G +++
Sbjct: 61 CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDV----ISWNTIINGYAIVGKIDEA 116
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRN 461
+F M ER V + ++ + G + EA+ L ++P + NSM +
Sbjct: 117 KRLFDEMPERNLVS-----WNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQ 171
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM-LSNICAADGEWHEAENLRKIMKEKNVQ 519
C G+ + A+ + ++ +G++ + V+ L + CA G + +L + + ++
Sbjct: 172 -C---GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIE 226
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/498 (32%), Positives = 254/498 (51%), Gaps = 42/498 (8%)
Query: 33 KQVHALLCTNDLNIFSLKSKLVG-VYAGCGDVNSARLVFDKIPN--PNVFMLNWMVMASA 89
+QVHA + + + L VG V A + A+ +F+ + P F+ N + A A
Sbjct: 45 RQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFECVEKQKPETFVWNSCLKALA 104
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
+ +AI F +R++ + FT S VL+AC+ LLD+ G+ +H V ++GF +++
Sbjct: 105 EGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLY 164
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+ N ++ +Y+ CG + AR +F M +RDVV
Sbjct: 165 LQNMIVHLYASCGEMGEARLLFEKMPQRDVV----------------------------- 195
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
T+N +IA ++GD A+ FSRM ++ +W +MI+G+ Q + EA+
Sbjct: 196 ------TWNIMIAQLIKQGDHEGAYDLFSRMPER----NVRSWTSMIAGYVQCGKAKEAI 245
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
LF M +G+K N VTV VL A G++ +G IH R G +V + LIDMY
Sbjct: 246 HLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMY 305
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
KCG L++A +FE + V SW+AMIG HG + ++ LF M + G+ N VT I
Sbjct: 306 VKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFI 365
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
+L ACSH GL+ +G F SM YG+ EHY C+VD+L R+G + EA++ + +PM
Sbjct: 366 GLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPM 425
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENL 509
+ GA C +H ++A + E+ +V+LSNI A G W + +
Sbjct: 426 KPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARV 485
Query: 510 RKIMKEKNVQKQPGFSRV 527
RK MK++ V+K PG+S +
Sbjct: 486 RKFMKDRQVKKTPGWSSI 503
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/449 (33%), Positives = 234/449 (52%), Gaps = 40/449 (8%)
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+L+AC D+ G+ VH + + N L+DMY+KCG+L A VF M R
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------- 217
VV+WTS+I+ Y DEA+ LF M EG+ P+ FT
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123
Query: 218 --------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
NA++ YA+ G A + F M V D+++WN MI G++++
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMP----VKDIISWNTMIGGYSKNS 179
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
NEAL LF M++ +KP+ T+ +L A S+ G+E+H + R G D +
Sbjct: 180 LPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVAN 238
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
AL+DMY KCG AR LF++ K++ +W MI YG HG +++I F M + G+
Sbjct: 239 ALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEP 298
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
+EV+ IS+L ACSH GL+++G F M++ VK EHYAC+VD+L RSG++ AY
Sbjct: 299 DEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKF 358
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
++ +P+ ++ GA +GC IH LA + E FE+ +V+L+N A +W
Sbjct: 359 IKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKW 418
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
E + LR+ + + ++K PG S +E +++
Sbjct: 419 EEVKKLRQKIGRRGLKKNPGCSWIEVKSK 447
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 147/281 (52%), Gaps = 13/281 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + +L GK VH + ND+ NIF + L+ +YA CG + A VF ++P
Sbjct: 105 VLHACACNGSLENGKDVHNYIRENDMQSNIFVCNA-LMDMYAKCGSMEDANSVFLEMPVK 163
Query: 77 NVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
++ ++W M ++ N EA+ F M + + T + +L AC L + +GK+
Sbjct: 164 DI--ISWNTMIGGYSKNSLPNEALSLFGDMV-LEMKPDGTTLACILPACASLASLDRGKE 220
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + GF +D V NAL+DMY KCG+ AR +F + +D+++WT MI+GY
Sbjct: 221 VHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGF 280
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWN 253
+ A+ F M+ G+EP++ ++ +I+ + + G + + FF+ M E V P L +
Sbjct: 281 GNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYA 340
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
++ A+S + A K K M I+P + T+ G L +G
Sbjct: 341 CIVDLLARSGKLAMAYKFIKSM---PIEP-DATIWGALLSG 377
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 176/400 (44%), Gaps = 49/400 (12%)
Query: 19 LLGKCMKSKALRQGKQVHAL---LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C + G+ VH C + F + L+ +YA CG ++ A LVFD +
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFC--NTLLDMYAKCGVLDGAILVFDLMSV 61
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
V ++ A A G EAI F M + FT + VL AC ++ GK V
Sbjct: 62 RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDV 121
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + ++++ V NAL+DMY+KCG + A VF M +D++SW +MI GY S
Sbjct: 122 HNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLP 181
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF---------- 245
+EA+ LF M LE ++P+ T I+ + A + + GF
Sbjct: 182 NEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANAL 240
Query: 246 --------VP-------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
VP DL+TW MI+G+ N A+ F M +GI+P+
Sbjct: 241 VDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDE 300
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALV---CRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
V+ +L A +G + G ++ C + ++ + + ++D+ ++ G L A
Sbjct: 301 VSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHY--ACIVDLLARSGKLAMAYKF 358
Query: 342 FEITRIKNVAS-WNAMI-GCYGKHGMVDSSIELFERMLEE 379
+ I+ A+ W A++ GC H ++L E++ E
Sbjct: 359 IKSMPIEPDATIWGALLSGCRIHH-----DVKLAEKVAEH 393
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ +LQA G + +GR +H + +H + L+DMY+KCG L A +F++
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
++ V +W ++I Y + G+ D +I LF M EG+ + T+ +VL AC+ G +E G +
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 407 IFRSMKERYGVKISKEHYAC--VVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRN 461
+ ++E + + C ++DM + G M +A + ++P + N+M G +
Sbjct: 121 VHNYIREN---DMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSK 177
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
N L++ G+ EM KPDG +
Sbjct: 178 --NSLPNEALSL-FGDMVLEM---KPDGTTL 202
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDK 72
L C+L C +L +GK+VH + N FS + + LV +Y CG ARL+FD
Sbjct: 202 LACILPACASLASLDRGKEVHGHILRN--GFFSDQQVANALVDMYVKCGVPVLARLLFDM 259
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIK 130
IP ++ M+ G AI F+ MR+ ++ +F +L AC GLLD +
Sbjct: 260 IPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLD-E 318
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGY 189
+ + + + + + ++D+ ++ G L A + M E D W +++SG
Sbjct: 319 GWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSG- 377
Query: 190 CNVSKVDEAVVLFERM--KLEGLEPNQFTYNAIIA-SYA 225
++ V L E++ + LEP Y ++A +YA
Sbjct: 378 ---CRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYA 413
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/516 (30%), Positives = 275/516 (53%), Gaps = 33/516 (6%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+++ L+ +Y G+ +A+LVFD + V N M+ ++A+ + M +
Sbjct: 150 VQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVG 209
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ T VL AC L +++ G++VH + + GF ++ V NAL+DMY KCG + A
Sbjct: 210 VEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAW 269
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS----- 223
+ GM ++DVV+WT++I+GY A++L M+ EG++PN + +++++
Sbjct: 270 LLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLV 329
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLV--------------------------TWNAMIS 257
Y G A+A ++ +E V + WNA++S
Sbjct: 330 YLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLS 389
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
GF Q++ EA++LFK MLV ++P++ T +L A + +Q IH + R G
Sbjct: 390 GFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLY 449
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKN--VASWNAMIGCYGKHGMVDSSIELFER 375
+ S L+D+YSKCGSL A +F I +K+ + W+A+I YGKHG +++LF +
Sbjct: 450 RLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQ 509
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M++ G++ N VT SVL ACSH GLV +G +F M +++ + +HY C++D+L R+G
Sbjct: 510 MVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAG 569
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
R+ +AY+L+R +P+ +++ GA C IH +L F++ +V+L+
Sbjct: 570 RLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEPENTGNYVLLAK 629
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+ AA G W +AE +R ++ E ++K P S +E R+
Sbjct: 630 LYAAVGRWGDAERVRDMVNEVGLRKLPAHSLIEVRD 665
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 146/543 (26%), Positives = 254/543 (46%), Gaps = 50/543 (9%)
Query: 17 DCLLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDKI 73
+ LLGK S++ + K++HAL+ T L IFS L SKL YA C + A +FDK+
Sbjct: 15 ESLLGKFSASQSHSETKRLHALILT--LGIFSSSNLCSKLATTYAQCHHASYASHLFDKL 72
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
P +F N M+ G +A+ F ++ +KFT+ +V+KAC L I G
Sbjct: 73 SQPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVG 132
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+H + G+++D V N L+ MY G +A+ VF M ER V+SW +MI+GY
Sbjct: 133 VGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRN 192
Query: 193 SKVDEAVVLFERMKLEGLEP-----------------------------------NQFTY 217
+ ++AV ++ RM G+EP N
Sbjct: 193 NCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVR 252
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
NA++ Y + G A+ M + D+VTW +I+G+ + AL L M
Sbjct: 253 NALVDMYVKCGQMKEAWLLAKGMDDK----DVVTWTTLINGYILNGDARSALMLCGMMQC 308
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G+KPN+V++ +L A G + G+ +HA R + +V +ALI+MY+KC
Sbjct: 309 EGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNL 368
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+ +F T K A WNA++ + ++ + +IELF++ML + ++ + T S+L A +
Sbjct: 369 SYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAI 428
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
+++ + I + R G E + +VD+ + G + A+ + + + + +
Sbjct: 429 LADLQQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIW 487
Query: 458 AFRNGC-NIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMK 514
+ HG +AV + + + G+ KP+ F + + C+ G +E +L M
Sbjct: 488 SAIIAAYGKHGHGKMAVKLFNQMVQSGV-KPNHVTFTSVLHACSHAGLVNEGFSLFNFML 546
Query: 515 EKN 517
+++
Sbjct: 547 KQH 549
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 266/515 (51%), Gaps = 46/515 (8%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
LV Y G +N AR VFD++P NV MV G EA F M E N
Sbjct: 166 LVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPE----KN 221
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVAT-QMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+++++L GLL ++G+ A M E DV +I Y + G L AR +F
Sbjct: 222 VVSWTVMLG---GLL--QEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLF 276
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M R+VVSWT+MI+GY +VD A LFE M E N+ ++ A++ Y G +
Sbjct: 277 DEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAMLKGYTNCGRLD 332
Query: 232 AAFAFFSRMTAE---------------GFVP------------DLVTWNAMISGFAQSKR 264
A F+ M + G VP D TW+AMI + +
Sbjct: 333 EASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGL 392
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
E +AL+LF+ M GI+PN ++ VL ++ GREIHA + R +DV+ S
Sbjct: 393 ELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASV 452
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+ MY KCG+L A+ +F+ +K+V WN++I Y +HG+ ++ +F M G+ +
Sbjct: 453 LLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPD 512
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
+VT + VLSACS+ G V+KGLEIF SM+ +Y V+ EHYAC+VD+L R+G++ EA DL+
Sbjct: 513 DVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLI 572
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
++PM + GA C H + DLA ++ + + F++LSNI A+ G W
Sbjct: 573 EKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWD 632
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQ 539
+ LR+ M+++ V K PG S + VEK+V
Sbjct: 633 DVAELRRNMRDRRVSKYPGCSWI-----VVEKKVH 662
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 176/364 (48%), Gaps = 26/364 (7%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N ++ L+ Y+ G + AR+VFD++ + N+ N +V QEA F M
Sbjct: 96 NFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
E N +++ ++ + I + ++V E +V A++ Y K G++
Sbjct: 156 SER----NTISWNGLVSGYINNGMINEAREVFDRMP----ERNVVSWTAMVRGYVKEGMI 207
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
A +F M E++VVSWT M+ G ++DEA LF+ M E + T +I Y
Sbjct: 208 SEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMP----EKDVVTRTNMIGGY 263
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+ G A F M ++V+W MI+G+ Q+++ + A KLF+ M + N
Sbjct: 264 CQVGRLVEARMLFDEMPRR----NVVSWTTMITGYVQNQQVDIARKLFEVM----PEKNE 315
Query: 285 VTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
V+ T +L+ G + E+ +A+ + V +A+I + + G + AR +F+
Sbjct: 316 VSWTAMLKGYTNCGRLDEASELFNAMPIK-----SVVACNAMILCFGQNGEVPKARQVFD 370
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
R K+ +W+AMI Y + G+ ++ELF M EG+R N +LISVLS C+ ++
Sbjct: 371 QMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDH 430
Query: 404 GLEI 407
G EI
Sbjct: 431 GREI 434
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 11/222 (4%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L +L C L G+++HA L + DL+++ + S L+ +Y CG++ A+ VFD+
Sbjct: 415 LISVLSVCAGLANLDHGREIHAQLVRSQFDLDVY-VASVLLSMYIKCGNLAKAKQVFDRF 473
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+V M N ++ A G EA+ F M + TF VL AC ++KKG
Sbjct: 474 AVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGL 533
Query: 134 QV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
++ +++ T+ E + ++D+ + G L A + M E D + W +++
Sbjct: 534 EIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRT 593
Query: 192 VSKVDEAVVLFERMKLEGLEPNQ----FTYNAIIASYARRGD 229
K+D A V + KL LEP + I AS R D
Sbjct: 594 HMKLDLAEVAAK--KLLVLEPKNAGPFILLSNIYASQGRWDD 633
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 266/515 (51%), Gaps = 46/515 (8%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
LV Y G +N AR VFD++P NV MV G EA F M E N
Sbjct: 166 LVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPE----KN 221
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVAT-QMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+++++L GLL ++G+ A M E DV +I Y + G L AR +F
Sbjct: 222 VVSWTVMLG---GLL--QEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLF 276
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M R+VVSWT+MI+GY +VD A LFE M E N+ ++ A++ Y G +
Sbjct: 277 DEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAMLKGYTNCGRLD 332
Query: 232 AAFAFFSRMTAE---------------GFVP------------DLVTWNAMISGFAQSKR 264
A F+ M + G VP D TW+AMI + +
Sbjct: 333 EASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGL 392
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
E +AL+LF+ M GI+PN ++ VL ++ GREIHA + R +DV+ S
Sbjct: 393 ELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASV 452
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+ MY KCG+L A+ +F+ +K+V WN++I Y +HG+ ++ +F M G+ +
Sbjct: 453 LLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPD 512
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
+VT + VLSACS+ G V+KGLEIF SM+ +Y V+ EHYAC+VD+L R+G++ EA DL+
Sbjct: 513 DVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLI 572
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
++PM + GA C H + DLA ++ + + F++LSNI A+ G W
Sbjct: 573 EKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWD 632
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQ 539
+ LR+ M+++ V K PG S + VEK+V
Sbjct: 633 DVAELRRNMRDRRVSKYPGCSWI-----VVEKKVH 662
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 176/364 (48%), Gaps = 26/364 (7%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N ++ L+ Y+ G + AR+VFD++ + N+ N +V QEA F M
Sbjct: 96 NFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
E N +++ ++ + I + ++V E +V A++ Y K G++
Sbjct: 156 SER----NTISWNGLVSGYINNGMINEAREVFDRMP----ERNVVSWTAMVRGYVKEGMI 207
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
A +F M E++VVSWT M+ G ++DEA LF+ M E + T +I Y
Sbjct: 208 SEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMP----EKDVVTRTNMIGGY 263
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+ G A F M ++V+W MI+G+ Q+++ + A KLF+ M + N
Sbjct: 264 CQVGRLVEARMLFDEMPRR----NVVSWTTMITGYVQNQQVDIARKLFEVM----PEKNE 315
Query: 285 VTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
V+ T +L+ G + E+ +A+ + V +A+I + + G + AR +F+
Sbjct: 316 VSWTAMLKGYTNCGRLDEASELFNAMPIK-----SVVACNAMILCFGQNGEVPKARQVFD 370
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
R K+ +W+AMI Y + G+ ++ELF M EG+R N +LISVLS C+ ++
Sbjct: 371 QMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDH 430
Query: 404 GLEI 407
G EI
Sbjct: 431 GREI 434
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 11/222 (4%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L +L C L G+++HA L + DL+++ + S L+ +Y CG++ A+ VFD+
Sbjct: 415 LISVLSVCAGLANLDHGREIHAQLVRSQFDLDVY-VASVLLSMYIKCGNLAKAKQVFDRF 473
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+V M N ++ A G EA+ F M + TF VL AC ++KKG
Sbjct: 474 AVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGL 533
Query: 134 QV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
++ +++ T+ E + ++D+ + G L A + M E D + W +++
Sbjct: 534 EIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRT 593
Query: 192 VSKVDEAVVLFERMKLEGLEPNQ----FTYNAIIASYARRGD 229
K+D A V + KL LEP + I AS R D
Sbjct: 594 HMKLDLAEVAAK--KLLVLEPKNAGPFILLSNIYASQGRWDD 633
>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 280/544 (51%), Gaps = 36/544 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L +C + LR G VH L ++N F L +KL+ +Y G ++ A +FD +P +
Sbjct: 65 ILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMPRRD 124
Query: 78 VFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
V N M+ AS N+ + +G +S M++ + N TF+ ++ AC GL+ ++
Sbjct: 125 VVSFNTMISASV-RNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRGIF 183
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA + G ++ VG++L+D Y+K L A + F+ + E D+VSW MI G +
Sbjct: 184 HAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNNSK 243
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV--------- 246
+ AV +F +M + + FT +II + ++ GD F G
Sbjct: 244 EHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNAL 303
Query: 247 -----------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
P++++W AMISGF Q+++ EA+ LFK ML G++ N
Sbjct: 304 ITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVREN 363
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+ + + +L G +++ G++IHA + + +D+ +ALIDMYSKCGSL+DA +F
Sbjct: 364 DFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHLVFM 423
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+V S MI YG+HG ++E+ M EG+ + VT + L ACSHGGLVE+
Sbjct: 424 KMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGLVEE 483
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
G+ +F+ M E + +K +EH+ACVVDML R+GR+ EA + + ++ + + C
Sbjct: 484 GVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLVWETLLGAC 543
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
+HG L ++ E+ + +V+L+NI A G W + +R+ + ++KQ G
Sbjct: 544 RVHGEMVLGEKSAQKIMELQPGRHGPYVLLANIYAERGSWEDKVMVREKLVSHGLKKQVG 603
Query: 524 FSRV 527
S V
Sbjct: 604 CSWV 607
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 202/438 (46%), Gaps = 40/438 (9%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
FS +L+ C D++ G VH ++ + + N L+ +Y K G + A ++F M
Sbjct: 62 FSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMP 121
Query: 176 ERDVVSWTSMISGYC-NVSKVDEAVVLFERMKLEGLEPNQFTYNAII------------- 221
RDVVS+ +MIS N + V L+ +MK E ++PN T+ +I
Sbjct: 122 RRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRG 181
Query: 222 ---ASYARRGDSNAAF-------AFFSRMTAEGFVP--------DLVTWNAMISGFAQSK 263
A R G S+ F + +M E + DLV+WN MI G A++
Sbjct: 182 IFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNN 241
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
+ A+++F ML ++ + T+T +++ G ++ G + H ++GL + +
Sbjct: 242 SKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYN 301
Query: 324 ALIDMYSKC-GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
ALI MYSKC + +F N+ SW AMI + ++ + +I LF+ ML G+R
Sbjct: 302 ALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVR 361
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
N+ + S+L + +E+G +I R +K +G+ +S + ++DM + G + +A+
Sbjct: 362 ENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNN--ALIDMYSKCGSLEDAH 419
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAA 499
+ ++ + S + HG+ A+ + E GL PDG L + C+
Sbjct: 420 LVFMKMGKHDVVSCTTMIMSYGQ-HGKGKEALEILAEMKSEGL-VPDGVTFLGCLYACSH 477
Query: 500 DGEWHEAENLRKIMKEKN 517
G E + KIM E +
Sbjct: 478 GGLVEEGVRVFKIMIEDH 495
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 141/298 (47%), Gaps = 16/298 (5%)
Query: 16 LDCLLGKCMKSKALRQGKQVHA----LLCTNDLNIFSLKSKLVGVYAGCGD-VNSARLVF 70
L ++ C K L+ G Q H L ++ I++ L+ +Y+ C V S +F
Sbjct: 265 LTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYN---ALITMYSKCEKGVASPVKIF 321
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
I PN+ ++W M S F N Q EAIG F M R N F+FS +L L +
Sbjct: 322 GSISEPNI--ISWTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLAN 379
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
+++GKQ+HA + F D+SV NALIDMYSKCG L A VF M + DVVS T+MI
Sbjct: 380 LEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMS 439
Query: 189 YCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVP 247
Y K EA+ + MK EGL P+ T+ + + + G F M + P
Sbjct: 440 YGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLKP 499
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
+ ++ ++ R NEA M GI+ + + +L A + G + +G +
Sbjct: 500 KREHFACVVDMLGRAGRLNEAENFIDEM---GIESDVLVWETLLGACRVHGEMVLGEK 554
>gi|15233645|ref|NP_195514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213618|sp|Q9SZK1.1|PP355_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g38010
gi|4467107|emb|CAB37541.1| putative protein [Arabidopsis thaliana]
gi|7270784|emb|CAB80466.1| putative protein [Arabidopsis thaliana]
gi|332661463|gb|AEE86863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 275/548 (50%), Gaps = 43/548 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNS-ARLVFDKIPNP 76
L+ +C +LR KQ+ L T DL L +K+V D S + ++ I +
Sbjct: 12 LISRC---SSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 77 -NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+ F N ++ + A + I + + + FTF V KAC I++GKQ+
Sbjct: 69 LSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQI 128
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + T+MGF +D+ V N+L+ Y CG +A +VF M RDVVSWT +I+G+
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLY 188
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRG----------------------DSNAA 233
EA+ F +M +E PN TY ++ S R G NA
Sbjct: 189 KEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 234 FAFFS---------RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS-GIKPN 283
+ R+ E D V+WN+MISG +R EA+ LF M S GIKP+
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+T VL A G++ GR +H + G+ D G+A++DMY+KCG ++ A +F
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
R KNV +WNA++G HG S+ FE M++ G + N VT ++ L+AC H GLV++
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 404 GLEIFRSMKER-YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
G F MK R Y + EHY C++D+LCR+G + EA +L++ +P+ + GA +
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485
Query: 463 CNIHGR-RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C G +L + + F ++ +V+LSNI AA+ W + +R++MK K + K
Sbjct: 486 CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545
Query: 522 PGFSRVEK 529
PG S +EK
Sbjct: 546 PGSSYIEK 553
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/497 (32%), Positives = 257/497 (51%), Gaps = 49/497 (9%)
Query: 85 VMASAFTGNFQEAIGYFSLMR--EFIYRCNKFTFSI--VLKACVGLLDIKKGKQVHAVAT 140
+ +A G+F AI F MR + C+ S+ LK+C L G +HA+A
Sbjct: 26 IRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLHALAL 85
Query: 141 QMGFENDVSVGNALIDMYSKCG--------------LLCSARRVFHGMFERDVVSWTSMI 186
+ G D NAL+++Y K +L S R+VF M E+DVVSW +++
Sbjct: 86 RSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLV 145
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF- 245
G + EA+ L M +G +P+ FT ++++ +A D T GF
Sbjct: 146 LGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFH 205
Query: 246 ------------------------------VPDLVTWNAMISGFAQSKRENEALKLFKGM 275
V D + WN+M++G AQ+ +EAL LF+ M
Sbjct: 206 DDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRM 265
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
L SGIKP VT + ++ A G S+ +G+++HA V R G +VF S+LIDMY KCG++
Sbjct: 266 LHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNV 325
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
AR +F+ + ++ SW AMI + HG ++ LF+RM ++ N +T ++VL+AC
Sbjct: 326 SIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTAC 385
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH GLV+KG + F SM + YG+ S EH+A + D L R G++ EAY+ + + + T S+
Sbjct: 386 SHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASV 445
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
C +H LA + ++ F++ R ++LSN ++ G W+EA +LRK M++
Sbjct: 446 WSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRK 505
Query: 516 KNVQKQPGFSRVEKRNE 532
K +QK+P S +E +N+
Sbjct: 506 KGMQKEPACSWIEVKNK 522
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 165/328 (50%), Gaps = 18/328 (5%)
Query: 29 LRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
+R+G ++H N ++F + S L+ +YA C + + VFD +P + + N M+
Sbjct: 189 VRRGMELHGFATRNGFHDDVF-VGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLA 247
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
A G+ EA+G F M + TFS ++ AC L + GKQ+HA + GF+
Sbjct: 248 GCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDG 307
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
+V + ++LIDMY KCG + ARR+F + D+VSWT+MI G+ EA+VLF+RM+
Sbjct: 308 NVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRME 367
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRE 265
L L+PN T+ A++ + + G + + +F+ M+ G VP L A+ + +
Sbjct: 368 LGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKL 427
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI----QIGREIHALVCR-MGLHIDVF 320
EA GM IKP + +L+A + + ++ ++I L R MG HI
Sbjct: 428 EEAYNFISGM---KIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHI--- 481
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIK 348
L + YS G +A L + R K
Sbjct: 482 ---ILSNTYSSSGRWNEAAHLRKSMRKK 506
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 175/382 (45%), Gaps = 51/382 (13%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVN-------SARLVFDK 72
LG + + ALR G LN++ KL + +++ S R VFD+
Sbjct: 76 LGASLHALALRSGAFADRFAANALLNLYC---KLPAPPSHSPEMDGSAVVLESVRKVFDE 132
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+P +V N +V+ A +G EA+G M + + FT S VL D+++G
Sbjct: 133 MPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRG 192
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
++H AT+ GF +DV VG++LIDMY+ C + +VF + RD + W SM++G
Sbjct: 193 MELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQN 252
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIAS----------------------------- 223
VDEA+ LF RM G++P T++++I +
Sbjct: 253 GSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFIS 312
Query: 224 ------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
Y + G+ + A F R+ + PD+V+W AMI G A EAL LF M +
Sbjct: 313 SSLIDMYCKCGNVSIARRIFDRIQS----PDIVSWTAMIMGHALHGPAREALVLFDRMEL 368
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+KPN++T VL A G + G + +++ G+ + +AL D + G L+
Sbjct: 369 GNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLE 428
Query: 337 DARTLFEITRIKNVAS-WNAMI 357
+A +IK AS W+ ++
Sbjct: 429 EAYNFISGMKIKPTASVWSTLL 450
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/554 (29%), Positives = 285/554 (51%), Gaps = 46/554 (8%)
Query: 18 CLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C L C + + + GKQVH A+ + + + + + L+ +Y C + SA VF+++P+
Sbjct: 246 CTLSACGQGEFVSFGKQVHCDAIKVGFEDDPY-VHTSLLTMYGKCQMIESAEKVFNEVPD 304
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGK 133
+ + N ++ A G +A+ + M+ + FT VL + GL D+ G+
Sbjct: 305 KEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDL--GR 362
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+H + ++ +++ +AL+ MYSK G A +F M ERDVV+W S+ISG+C
Sbjct: 363 LIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNR 422
Query: 194 KVDEAVVLFERMKLE-----------------------------------GLEPNQFTYN 218
K EA+ F M+ + GL+ + F +
Sbjct: 423 KYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVAS 482
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+++ Y++ G A FS M + +LV WN++IS + ++ + ++ LF +L +
Sbjct: 483 SLLDMYSKFGFPERAGNIFSDMP----LKNLVAWNSIISCYCRNNLPDLSINLFSQVLRN 538
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+ P++V+ T VL A ++ G+ +H + R+ + D+ + LIDMY KCG LK A
Sbjct: 539 DLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYA 598
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+ +FE KN+ +WN+MIG YG HG +IELF+ M G++ ++VT +S+LS+C+H
Sbjct: 599 QHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHS 658
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GL+E+GL +F MK ++G++ EHY +VD+ R+G + +AY ++ +P+ S+ +
Sbjct: 659 GLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLS 718
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C IH +L + + M K +V L N+ W NLR MKEK +
Sbjct: 719 LLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGL 778
Query: 519 QKQPGFSRVEKRNE 532
+K PG S +E RN+
Sbjct: 779 KKTPGCSWIEVRNK 792
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 150/535 (28%), Positives = 262/535 (48%), Gaps = 52/535 (9%)
Query: 24 MKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPN-PNVFML 81
M+S ++GKQ+H+ + N LN L++ L+ Y CG AR +F K+ + N+
Sbjct: 150 MQSSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAW 209
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
N M+ G ++ ++ Y+ L + + +F+ L AC + GKQVH A +
Sbjct: 210 NVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIK 269
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
+GFE+D V +L+ MY KC ++ SA +VF+ + ++++ W ++IS Y +A+ +
Sbjct: 270 VGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRI 329
Query: 202 FERMKLEGLEPNQFTY-----------------------------------NAIIASYAR 226
+++MKL + + FT +A++ Y++
Sbjct: 330 YKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSK 389
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
GDSN A + FS M D+V W ++ISGF Q+++ EAL F+ M +KP++
Sbjct: 390 FGDSNYANSIFSTMKER----DVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDI 445
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ ++ A + +G IH V + GL +DVF S+L+DMYSK G + A +F
Sbjct: 446 MASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMP 505
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+KN+ +WN++I CY ++ + D SI LF ++L + + V+ SVL+A S + KG
Sbjct: 506 LKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKS 565
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGC 463
+ + R + + ++DM + G + A + ++ + NSM G + +
Sbjct: 566 VHGYLV-RLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGS-- 622
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRKIMKEK 516
HG A+ + +E G+ KPD LS + C G E +L ++MK K
Sbjct: 623 --HGECSKAIELFDEMRSSGI-KPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMK 674
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 155/323 (47%), Gaps = 23/323 (7%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+FT+ +LKAC L +++ GK +H+ G +D + ++LI++Y KCG A +VF
Sbjct: 52 TRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVF 111
Query: 172 H-----GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG---------------LE 211
G+ DV W S+I GY +++E +V F RM+ G L
Sbjct: 112 DQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYKEGKQIHSYIVRNMLN 171
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
+ F A+I +Y + G A F ++ ++V WN MI GF ++ +L+
Sbjct: 172 FDPFLETALIDTYFKCGRPTEARYLFKKLKDRS---NIVAWNVMIGGFGENGLWENSLEY 228
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
+ +K + + T L A G + G+++H ++G D + ++L+ MY K
Sbjct: 229 YLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGK 288
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
C ++ A +F K + WNA+I Y +G ++ ++++M + ++ T+++V
Sbjct: 289 CQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNV 348
Query: 392 LSACSHGGLVEKGLEIFRSMKER 414
L++ S GL + G I + +R
Sbjct: 349 LTSSSMAGLYDLGRLIHTEIVKR 371
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 190/439 (43%), Gaps = 71/439 (16%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C L+ GK +H+ + T L+ + S L+ +Y CG A VFD++P
Sbjct: 59 LLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSG 118
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V + + + S G F+ F + E + + + S K+GKQ+H+
Sbjct: 119 VSVDDVTIWNSIIDGYFR-----FGQLEEGMVQFGRMQSS----------GYKEGKQIHS 163
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER-DVVSWTSMISGYCNVSKVD 196
+ D + ALID Y KCG AR +F + +R ++V+W MI G+ +
Sbjct: 164 YIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWE 223
Query: 197 EAVVLFERMKLE-----------------------------------GLEPNQFTYNAII 221
++ + K E G E + + + +++
Sbjct: 224 NSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLL 283
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
Y + +A F+ VPD + WNA+IS + + +AL+++K M +
Sbjct: 284 TMYGKCQMIESAEKVFNE------VPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCT 337
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ ++ T+ VL + + G +GR IH + + L + SAL+ MYSK G A
Sbjct: 338 VLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYAN 397
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS--- 396
++F + ++V +W ++I + ++ +++ F M + ++ + + S++SAC+
Sbjct: 398 SIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLE 457
Query: 397 --------HGGLVEKGLEI 407
HG +++ GL++
Sbjct: 458 KVDLGCTIHGFVIKSGLQL 476
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
I Q ++ EALKL+ S + T +L+A ++Q G+ IH+ + GL
Sbjct: 28 IKSLVQQRQYIEALKLYTK---SPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEI-----TRIKNVASWNAMIGCYGKHGMVDSSI 370
H D + S+LI++Y KCG+ DA +F+ + +V WN++I Y + G ++ +
Sbjct: 85 HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGM 144
Query: 371 ELFERMLEEGMR 382
F RM G +
Sbjct: 145 VQFGRMQSSGYK 156
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/534 (31%), Positives = 271/534 (50%), Gaps = 40/534 (7%)
Query: 30 RQGKQVHALL----CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
R G+ +H C ++L L S +V +Y V AR VFD++P + + W
Sbjct: 136 RAGRVIHGQAVVDGCDSEL---LLGSNIVKMYFKFWRVEDARKVFDRMPEKDTIL--WNT 190
Query: 86 MASAFTGN--FQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
M S + N + E+I F L+ E R + T +L A L +++ G Q+H++AT+
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G + V I +YSKCG + +F + D+V++ +MI GY + + + ++ LF
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 203 ERMKLEGLEPNQFTYNAIIAS-------YARRGD------------SNAAFAFFSRMTA- 242
+ + L G T +++ YA G S A +S++
Sbjct: 311 KELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEI 370
Query: 243 --------EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
E L +WNAMISG+ Q+ +A+ LF+ M S PN VT+T +L A
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
G++ +G+ +H LV ++ +ALI MY+KCGS+ +AR LF++ KN +WN
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 490
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
MI YG HG ++ +F ML G+ VT + VL ACSH GLV++G EIF SM R
Sbjct: 491 TMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVT 474
YG + S +HYAC+VD+L R+G + A + + + +S+ C IH +LA T
Sbjct: 551 YGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLART 610
Query: 475 MGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ E+ FE+ V+LSNI +AD + +A +R+ K++ + K PG++ +E
Sbjct: 611 VSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 235/530 (44%), Gaps = 60/530 (11%)
Query: 25 KSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+S ++ Q HA + + N SL +KL + G + AR +F + P+VF+ N
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 84 MVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
++ + + ++ F+ +R+ + N T++ + A G D + G+ +H A
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY------------- 189
G ++++ +G+ ++ MY K + AR+VF M E+D + W +MISGY
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 190 -------------CNVSKVDEAVVLFERMKL----------EGLEPNQFTYNAIIASYAR 226
+ + AV + ++L G + + I+ Y++
Sbjct: 209 RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSK 268
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G A F PD+V +NAMI G+ + +L LFK +++SG + + T
Sbjct: 269 CGKIKMGSALFREFRK----PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST 324
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ ++ ++G + + IH + +AL +YSK ++ AR LF+ +
Sbjct: 325 LVSLVP---VSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESP 381
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG-- 404
K++ SWNAMI Y ++G+ + +I LF M + N VT+ +LSAC+ G + G
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 405 -LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFR 460
++ RS + +S ++ M + G + EA +DL+ + N+M
Sbjct: 442 VHDLVRSTDFESSIYVS----TALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMI---- 493
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRK-PDGFVMLSNICAADGEWHEAENL 509
+G +HG+ A+ + E G+ P F+ + C+ G E + +
Sbjct: 494 SGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 167/400 (41%), Gaps = 49/400 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVG---VYAGCGDVNSARLVFDKIPN 75
+L + + LR G Q+H+L +S L G +Y+ CG + +F +
Sbjct: 227 ILPAVAELQELRLGMQIHSL--ATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRK 284
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
P++ N M+ +T N + + SL +E + + S ++ + +
Sbjct: 285 PDIVAYNAMI--HGYTSNGETELS-LSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAI 341
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + F + SV AL +YSK + SAR++F E+ + SW +MISGY
Sbjct: 342 HGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLT 401
Query: 196 DEAVVLFERMKLEGLEPNQFTY-----------------------------------NAI 220
++A+ LF M+ PN T A+
Sbjct: 402 EDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTAL 461
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I YA+ G A F MT + + VTWN MISG+ + EAL +F ML SGI
Sbjct: 462 IGMYAKCGSIAEARRLFDLMTKK----NEVTWNTMISGYGLHGQGQEALNIFYEMLNSGI 517
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
P VT VL A G ++ G EI ++++ R G V + ++D+ + G L+ A
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRAL 577
Query: 340 TLFEITRIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLE 378
E I+ +S W ++G H + + + E++ E
Sbjct: 578 QFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE 617
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/503 (32%), Positives = 260/503 (51%), Gaps = 40/503 (7%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
GDVN A F ++ P++ + N ++ I + M+ N FTF VL
Sbjct: 48 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
KAC G GKQ+H + GF ++V V N+L+ MY+K G + AR VF + +R VV
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 167
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN--------------------------- 213
SWTS+ISGY EA+ +F+ M+ ++P+
Sbjct: 168 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 227
Query: 214 -----QFTYNAIIA---SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
+F + +I+ YA+RG A FF+RM P+L+ WNAMISG+A +
Sbjct: 228 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEK----PNLILWNAMISGYANNGYG 283
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EA+KLF+ M+ I+ +++T+ + A GS+++ R + + + D F + L
Sbjct: 284 EEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGL 343
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
IDMY+KCGS+ AR +F+ K+V W+ MI YG HG +I L+ M + G+ N+
Sbjct: 344 IDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPND 403
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
T I +L+AC + GLV++G E+F M + +G++ +HY+CVVD+L R+G + +AYD +
Sbjct: 404 GTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 462
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
+P+ S+ GA + C IH + L E+ F + +V LSN+ A+ W
Sbjct: 463 SMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTR 522
Query: 506 AENLRKIMKEKNVQKQPGFSRVE 528
N+R +M +K + K G S +E
Sbjct: 523 VANVRLMMTQKGLNKDLGHSSIE 545
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 171/366 (46%), Gaps = 47/366 (12%)
Query: 32 GKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
GKQ+H N+F +++ LV +YA G ++ AR+VFDK+ + V ++W + S
Sbjct: 119 GKQIHGQTFKYGFGSNVF-VQNSLVSMYAKFGQISYARIVFDKLHDRTV--VSWTSIISG 175
Query: 90 FT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ G+ EA+ F MR+ + + V+ A + D+ +GK +H + T++G E +
Sbjct: 176 YVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFE 235
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
+ +L MY+K GL+ AR F+ M + +++ W +MISGY N +EA+ LF M
Sbjct: 236 PDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMIT 295
Query: 208 EGLEPNQFTY-NAIIAS----------------------------------YARRGDSNA 232
+ + + T +A++AS YA+ G
Sbjct: 296 KNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYL 355
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
A F R+ + D+V W+ MI G+ EA+ L+ M +G+ PN+ T G+L
Sbjct: 356 ARCVFDRVADK----DVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLT 411
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK-NVA 351
A +G ++ G E+ L+ G+ S ++D+ + G L A IK V+
Sbjct: 412 ACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVS 471
Query: 352 SWNAMI 357
W A++
Sbjct: 472 VWGALL 477
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 128/281 (45%), Gaps = 14/281 (4%)
Query: 29 LRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L QGK +H L+ L + L +YA G V AR F+++ PN+ + N M+
Sbjct: 217 LGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISG 276
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTF--SIVLKACVGLLDIKKGKQVHAVATQMGFE 145
A G +EAI F M R + T +++ A VG L++ + + ++ +
Sbjct: 277 YANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLEL--ARWLDGYISKSEYR 334
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+D V LIDMY+KCG + AR VF + ++DVV W+ MI GY EA+ L+ M
Sbjct: 335 DDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEM 394
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
K G+ PN T+ ++ + G + F M G P ++ ++ ++
Sbjct: 395 KQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYL 454
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
N+A M IKP GV G L + +I R++
Sbjct: 455 NQAYDFIMSM---PIKP------GVSVWGALLSACKIHRKV 486
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 148/303 (48%), Gaps = 15/303 (4%)
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
++ ++ + GL +F I + GD N A F ++ PD++ WNA+I G+
Sbjct: 21 VYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSE----PDILLWNAIIKGYT 76
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q + ++++ M +S + PN T VL+A G T IG++IH + G +VF
Sbjct: 77 QKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVF 136
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
++L+ MY+K G + AR +F+ + V SW ++I Y ++G ++ +F+ M +
Sbjct: 137 VQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCN 196
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++ + + L+SV++A ++ + +G I + + G++ + + M + G +VE
Sbjct: 197 VKPDWIALVSVMTAYTNVEDLGQGKSI-HGLVTKLGLEFEPDIVISLTTMYAKRG-LVEV 254
Query: 441 ----YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
++ + + + + N+M + N +G + A+ + E +R D M S +
Sbjct: 255 ARFFFNRMEKPNLILWNAMISGYAN----NGYGEEAIKLFREMITKNIR-VDSITMRSAV 309
Query: 497 CAA 499
A+
Sbjct: 310 LAS 312
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/552 (30%), Positives = 275/552 (49%), Gaps = 39/552 (7%)
Query: 16 LDCLLGKCMKS-KALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKI 73
L CLL KC+ R G H L ++ + L+ YA +++A LVFD++
Sbjct: 413 LSCLL-KCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRM 471
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P+ + N ++ G EAI F M + + T VL AC G+
Sbjct: 472 PHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGR 531
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH + + G + S+ NAL+DMYS C S ++F M +++VVSWT+MI+ Y
Sbjct: 532 VVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAG 591
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFVP- 247
D+ L + M L+G++P+ F +++ +A ++G S +A + M E +P
Sbjct: 592 LFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGM--EKLLPV 649
Query: 248 ---------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
D+++WN +I G++++ NE+ LF ML+
Sbjct: 650 ANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-F 708
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
KPN VT+T +L A S++ GREIHA R G D +T +AL+DMY KCG+L AR
Sbjct: 709 KPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARV 768
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
LF+ KN+ SW MI YG HG ++ LFE+M G+ + + ++L AC H GL
Sbjct: 769 LFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGL 828
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
+G + F +M++ Y ++ +HY C+VD+L +G + EA++ + +P+ +S+ +
Sbjct: 829 TAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLL 888
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+GC IH LA + + F++ +V+L+NI A W + L+ + + +++
Sbjct: 889 HGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRE 948
Query: 521 QPGFSRVEKRNE 532
G S +E R +
Sbjct: 949 NTGCSWIEVRGK 960
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 200/442 (45%), Gaps = 62/442 (14%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
C + ++L ++ HAL+ I L +LV Y CGD+ AR+VFD++P +
Sbjct: 104 CGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADV 163
Query: 81 LNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
W + SA+ G+FQE + F M+ + S VLK L I +G+ +H +
Sbjct: 164 RVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGL 223
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
++G +V NALI +YS+CG + A +VF M RD +SW S ISGY + D A
Sbjct: 224 LEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRA 283
Query: 199 VVLFERMKLEGLEPNQFTYNAIIAS----------------------------------- 223
V LF +M EG E + T +++ +
Sbjct: 284 VDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDE 343
Query: 224 ---------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
Y + GD +A F M ++G ++ WN ++ G+A++ E+L LF+
Sbjct: 344 ALGSKLVFMYVKCGDMGSARRVFDAMPSKG---NVHVWNLIMGGYAKAAEFEESLLLFEQ 400
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M GI P+ ++ +L+ + G H + ++G +ALI Y+K
Sbjct: 401 MHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNM 460
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
+ +A +F+ ++ SWN++I +G+ +IELF RM +G + TL+SVL A
Sbjct: 461 IDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPA 520
Query: 395 CS-----------HGGLVEKGL 405
C+ HG V+ GL
Sbjct: 521 CARSHYWFVGRVVHGYSVKTGL 542
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 193/424 (45%), Gaps = 52/424 (12%)
Query: 16 LDCLLGKCMKS-KALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
+ C+L KC+ S ++ +G+ +H LL L ++ + L+ +Y+ CG + A VFD +
Sbjct: 201 VSCVL-KCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSM 259
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+ N + G A+ FS M + T VL AC L GK
Sbjct: 260 HARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGK 319
Query: 134 QVHAVATQMGFENDV---------SVGNALIDMYSKCGLLCSARRVFHGMFER-DVVSWT 183
VH + + G D+ ++G+ L+ MY KCG + SARRVF M + +V W
Sbjct: 320 VVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWN 379
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------- 217
++ GY ++ +E+++LFE+M G+ P++
Sbjct: 380 LIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKL 439
Query: 218 ---------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
NA+I+ YA+ + A F RM + D ++WN++ISG + +EA
Sbjct: 440 GFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQ----DTISWNSVISGCTSNGLNSEA 495
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
++LF M + G + ++ T+ VL A + +GR +H + GL + +AL+DM
Sbjct: 496 IELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDM 555
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
YS C +F KNV SW AMI Y + G+ D L + M+ +G++ + +
Sbjct: 556 YSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAV 615
Query: 389 ISVL 392
SVL
Sbjct: 616 TSVL 619
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 7/199 (3%)
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ +Y + GD A F M V D+ W +++S +A++ E + LF+ M G
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPR--VADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCG 193
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ P+ V+ VL+ GSI G IH L+ ++GL +ALI +YS+CG ++DA
Sbjct: 194 VSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAM 253
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ ++ SWN+ I Y +G D +++LF +M EG + VT++SVL AC+
Sbjct: 254 QVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACA--- 310
Query: 400 LVEKGLEIFRSMKERYGVK 418
E G E+ + Y +K
Sbjct: 311 --ELGFELVGKVVHGYSMK 327
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 241/450 (53%), Gaps = 41/450 (9%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+ VL C+ I++G++VHA + +E V + LI +Y+KC L ARRV M
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------ 223
ER+VVSWT+MISGY EA+ LF M + G PN+FT+ ++ S
Sbjct: 73 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132
Query: 224 -----------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
YA+ G A F + D+V+ A+ISG+A
Sbjct: 133 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER----DVVSCTAIISGYA 188
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q + EAL LF+ + G++ N VT VL A ++ GR++H+ V R L V
Sbjct: 189 QLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVV 248
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
++LIDMYSKCGSL +R +F+ + V SWNAM+ Y KHG+ ++ELF+ M EE
Sbjct: 249 LQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEEN 308
Query: 381 -MRANEVTLISVLSACSHGGLVEKGLEIFRSM-KERYGVKISKEHYACVVDMLCRSGRMV 438
++ + VT ++VLS CSHGG+ ++GLEIF M ++ G + EHY CVVD+ R+GR+
Sbjct: 309 KVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVE 368
Query: 439 EAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
EA++ ++++P T ++ G+ C +H + + E+ +V+LSN+ A
Sbjct: 369 EAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYA 428
Query: 499 ADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ G W + +R++MKEK V K+PG S +E
Sbjct: 429 SAGRWDDVRTVRELMKEKAVIKEPGRSWIE 458
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 212/434 (48%), Gaps = 51/434 (11%)
Query: 8 INNLSVNY--LDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVN 64
I L V + D +L +C+ A+R+G++VHA ++ T L+++L+ +Y C +
Sbjct: 3 IQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLG 62
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
AR V D++P NV ++W M S ++ G EA+ F M N+FTF+ VL +
Sbjct: 63 DARRVLDEMPERNV--VSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C + G+Q+H++ + FE+ + VG++L+DMY+K G +C ARRVF G+ ERDVVS
Sbjct: 121 CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSC 180
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------- 217
T++ISGY + +EA+ LF R++ EG+ N TY
Sbjct: 181 TAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLR 240
Query: 218 ----------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
N++I Y++ G + F M +++WNAM+ G+++ E
Sbjct: 241 AKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPER----TVISWNAMLVGYSKHGLGRE 296
Query: 268 ALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVC--RMGLHIDVFTGSA 324
A++LFK M +KP++VT VL G G EI + + G ++
Sbjct: 297 AVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGC 356
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLE-EGMR 382
++D++ + G +++A + + A+ W +++G H V + R+LE E
Sbjct: 357 VVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESEN 416
Query: 383 ANEVTLISVLSACS 396
A ++S L A +
Sbjct: 417 AGNYVILSNLYASA 430
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/530 (31%), Positives = 271/530 (51%), Gaps = 35/530 (6%)
Query: 29 LRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN-PNVFMLNWMVMA 87
LR + + L T + S + L +Y + AR +FD P+ + F+ N M+ A
Sbjct: 2 LRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRDDAFLCNSMIKA 61
Query: 88 SAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
+ E+ Y L R + + FTFS++ K+C + I +G+++H+ +GF
Sbjct: 62 YVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCL 121
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D+ AL+DMY+K G + AR++F M +R VSWT++I GY +D A LF++M
Sbjct: 122 DLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQM- 180
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP------------------- 247
+E + +N +I +Y + GD +A F M V
Sbjct: 181 ---IEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARS 237
Query: 248 --------DLVTWNAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTG 298
+L +WNAMISG+ Q+K+ EALKLF M + ++P+ VT+ VL A G
Sbjct: 238 LFDAMPEKNLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLG 297
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++ +G +H V R L G+ALIDMY+KCG + +R +F+ K ASWNA+I
Sbjct: 298 ALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALIN 357
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
+ +G ++ LF M +G NE+T+I VLSAC+H GLVE+G F++M+E +G+
Sbjct: 358 AFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEE-FGLT 416
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEE 478
EHY C+VD+L R+G + EA L+ +P + +F C A + +E
Sbjct: 417 PKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKE 476
Query: 479 FFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+M ++ML N+ A + W EA+ ++ +M+ V+K+ G S +E
Sbjct: 477 AIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIE 526
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/452 (32%), Positives = 241/452 (53%), Gaps = 57/452 (12%)
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H A ++GFE+ + V NALI MY+ CG L A+++F GM +RD+VSW ++I GY +K
Sbjct: 46 IHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNK 105
Query: 195 VDEAVVLFERM-----------------------------------KLEGLEPNQFTYNA 219
E + LF+ M K LE + + N
Sbjct: 106 YKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNT 165
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+I Y R G+ AA F M D+++W +MI+G++Q+ + ++A+KLF+ M+ +
Sbjct: 166 LIDMYGRLGNLTAARKLFDNMPKR----DVISWTSMITGYSQASQFSDAVKLFQEMMAAK 221
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+KP+ VTV VL A G + +G +H + R G+ D++ G++LIDMY KCG ++ A
Sbjct: 222 VKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKAL 281
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F + K+ SW ++I +G +S+++LF +ML EG++ T + +L AC+H G
Sbjct: 282 EVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAG 341
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LV KGLE F SM+ +G+ + +HY CVVD+L RSG + +AY+ ++++P+ +
Sbjct: 342 LVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRIL 401
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ C +HG LA + E+ +V+LSN A W +A +R++M++ +VQ
Sbjct: 402 LSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQ 461
Query: 520 K------------------QPGFSRVEKRNEF 533
K +PG +VE RN+F
Sbjct: 462 KPSGSSSIEVDGMVSNYSQEPGLLQVETRNDF 493
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 176/384 (45%), Gaps = 46/384 (11%)
Query: 34 QVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN 93
VHAL + +F + + L+ +YA CG + A+ +FD + + ++ N ++ +
Sbjct: 47 HVHALKLGFESYLF-VSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNK 105
Query: 94 FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNA 153
++E + F M + + T ++ AC L D + + + E DV +GN
Sbjct: 106 YKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNT 165
Query: 154 LIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN 213
LIDMY + G L +AR++F M +RDV+SWTSMI+GY S+ +AV LF+ M ++P+
Sbjct: 166 LIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPD 225
Query: 214 QFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL------------------------ 249
+ T +++++ A G + +A + G D+
Sbjct: 226 KVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFH 285
Query: 250 -------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI 302
V+W ++ISG A + N AL LF ML G++P + T G+L A G +
Sbjct: 286 RMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNK 345
Query: 303 GRE-------IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWN 354
G E +H LV M + ++D+ S+ G++ A ++ + +V W
Sbjct: 346 GLEYFESMESVHGLVPAMKHY------GCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWR 399
Query: 355 AMIGCYGKHGMVDSSIELFERMLE 378
++ HG V + +R+LE
Sbjct: 400 ILLSACKLHGNVVLAEIATKRLLE 423
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 276 LVSGIKPNNVTV--TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
L S I P + V T + A ++ SI + HAL ++G +F +ALI MY+ CG
Sbjct: 20 LSSTIAPAALVVALTTNINASTISSSIHV----HAL--KLGFESYLFVSNALIHMYAMCG 73
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
L A+ +F+ +++ SWN +I Y ++ + LF+ M ++A+ VT++ ++
Sbjct: 74 QLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIIL 133
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
ACSH G E + + +KE ++I ++DM R G + A L +P
Sbjct: 134 ACSHLGDWEFADSMVKYIKEN-NLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMP 187
>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
Length = 762
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 271/520 (52%), Gaps = 47/520 (9%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
L+ Y G + +AR VF ++P+ + N M+M + G EA+ F+ MR +
Sbjct: 174 LLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGRHGEALELFAAMRREGVDTS 233
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
FTFS +L G++D+ G+Q+H + + +V V NAL+D YSKC L +++F
Sbjct: 234 HFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGDLKQLFD 293
Query: 173 GMFERDVVSWTSMISGYCNVSKVDE-AVVLFERMK------------------------- 206
M ERD VS+ MIS C+ ++ A+ LF M+
Sbjct: 294 EMSERDNVSYNVMISA-CSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAGALPHIK 352
Query: 207 ----------LEGLEPNQFTYNAIIASYARRGDSNAA---FAFFSRMTAEGFVPDLVTWN 253
L GL F NA+I Y++ G +AA FA+ S TA ++W
Sbjct: 353 IGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTA-------ISWT 405
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
A+I+G Q+ + EAL+LF M +G+ P+ T + ++++ I IGR++HA + +
Sbjct: 406 ALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKS 465
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
G VF+GSAL+DMY+KCG L +A F KN +WNA+I Y ++G ++I +F
Sbjct: 466 GHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMF 525
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
+ ML G+ + VT +SVL+AC H GL E+ ++ F M+ Y + KEHY+CV+D L R
Sbjct: 526 DSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYYYSMSPWKEHYSCVIDTLGR 585
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G + ++ ++P + + + C I+G +DLA E+ F M +V+L
Sbjct: 586 AGCFDKIQKVIDEMPFEDDPIIWSSILHSCRIYGNQDLATVAAEKLFTMVPTDATAYVIL 645
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
SNI A G W A ++KIM+++ V+K+ G S VE + +
Sbjct: 646 SNIYAKAGNWEGAARVKKIMRDRGVKKESGNSWVEIKQKI 685
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 209/454 (46%), Gaps = 48/454 (10%)
Query: 82 NWMVMASAFT--GNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
W +M G +A+ F ++RE + T + VL V D+ +H V
Sbjct: 104 TWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVLN--VPGCDVGT---LHPV 158
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
T++GF V V N L+D Y K G + +ARRVF M RD +++ +MI G + EA
Sbjct: 159 VTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGRHGEA 218
Query: 199 VVLFERMKLEGLEPNQFTYNAIIAS----------------YARRGDS------NAAFAF 236
+ LF M+ EG++ + FT+++++ + R S NA F
Sbjct: 219 LELFAAMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNALLDF 278
Query: 237 FSRMTAEGFVPDL---------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
+S+ + G + L V++N MIS + ++ AL+LF+ M G +
Sbjct: 279 YSKCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDRRTLPY 338
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
+L G I+IGR+IHA + GL ++ F G+ALIDMYSKCG L A+T+F
Sbjct: 339 ASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSD 398
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
K SW A+I ++G + +++LF M G+ + T S++ + S ++ G ++
Sbjct: 399 KTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQL 458
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCN 464
+ + G S + ++DM + G + EA ++P N++ A+
Sbjct: 459 HAYLT-KSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQ--- 514
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+G+ A+ M + GL PD LS + A
Sbjct: 515 -YGQAKNAIRMFDSMLHCGL-CPDPVTFLSVLAA 546
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 42/307 (13%)
Query: 29 LRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
L G+Q+H L N+F + + L+ Y+ C + + +FD++ + N M+
Sbjct: 250 LHLGRQIHGLFVRANPSCNVF-VNNALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMIS 308
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
A ++ A+ F M+ + ++ +L L IK G+Q+HA G
Sbjct: 309 ACSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTL 368
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
+ VGNALIDMYSKCG+L +A+ +F ++ +SWT++I+G + +EA+ LF M+
Sbjct: 369 EDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTALITGCVQNGQNEEALQLFCDMR 428
Query: 207 LEGLEPNQ-----------------------------------FTYNAIIASYARRGDSN 231
GL P++ F+ +A++ YA+ G +
Sbjct: 429 RAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLD 488
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A F+ M + + +TWNA+IS +AQ + A+++F ML G+ P+ VT VL
Sbjct: 489 EAIRTFNEMPEK----NSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVL 544
Query: 292 QAGGLTG 298
A G G
Sbjct: 545 AACGHNG 551
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 111/213 (52%), Gaps = 1/213 (0%)
Query: 29 LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
++ G+Q+HA L + L + + + L+ +Y+ CG +++A+ +F + ++
Sbjct: 351 IKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTALITG 410
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
G +EA+ F MR ++ T S ++K+ L I G+Q+HA T+ G
Sbjct: 411 CVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKSGHMPS 470
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V G+AL+DMY+KCG L A R F+ M E++ ++W ++IS Y + A+ +F+ M
Sbjct: 471 VFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLH 530
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
GL P+ T+ +++A+ G + +F M
Sbjct: 531 CGLCPDPVTFLSVLAACGHNGLAEECMKYFDLM 563
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/506 (31%), Positives = 254/506 (50%), Gaps = 42/506 (8%)
Query: 26 SKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
+K Q+HA + L+ + + S V V + A +F+ +PN+ + N +
Sbjct: 19 TKTQTHLPQIHAHFLRHGLHHSNQILSHFVSVCTSLHQIPYATTIFNHTHHPNILLFNSI 78
Query: 85 VMASAFTGNFQEAIGYFSLMR-EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
+ A + F ++ +F+LM+ + FTF +LKA L D G+ +HA T +G
Sbjct: 79 IKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLGQCLHAHVTALG 138
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
F V L+++YS CG + A +VF M R+VV W MI+G+C
Sbjct: 139 FYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFC------------- 185
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
+ GD F RM +V+WN MIS AQ K
Sbjct: 186 ----------------------KMGDLEIGLKLFKRMGQR----SVVSWNLMISCLAQRK 219
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT-G 322
++ EA +F+ ML G +P++ T+ VL G + G IH+ GL V + G
Sbjct: 220 KDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVG 279
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
++L+D Y KCG+L+ A +F KNV SWNAMI G +G + +ELFE+M +G+
Sbjct: 280 NSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVT 339
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
++ T + VL+ C+H G V+KG EIF SM ++ + EHY CVVD+L R G + EAYD
Sbjct: 340 PSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYD 399
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
L+R +P+ ++ GA + C HG R++A +E + +V+LSN+ A + +
Sbjct: 400 LIRNMPLMPNAALWGALLSACRTHGDREVAEIAAKELVRLEPGNSGNYVLLSNVYAEERK 459
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVE 528
W+E E +R +M+ ++K PG S ++
Sbjct: 460 WNEVEKVRVLMQGVGIKKNPGQSALQ 485
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 252/522 (48%), Gaps = 48/522 (9%)
Query: 13 VNYLDC--LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
NYL LL C K L Q+HA + + + L+ +Y+ + AR VF
Sbjct: 50 TNYLHYPRLLSSC---KHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVF 106
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
D PNP+ + N M+ A + + EA+ + M ++
Sbjct: 107 DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCM------------------------VE 142
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
KG G E DV +G L+DMYSK G L AR VF M +RDVV+W +MI+G
Sbjct: 143 KG----------GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLS 192
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV 250
A +F++M ++ + ++ ++A YA G F +M V
Sbjct: 193 QSEDPYVARRVFDQM----VDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN-----V 243
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
TWN +I+ + Q+ EA+ F M + PN+VT VL A + + G HA +
Sbjct: 244 TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACI 303
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
+MG + G++LIDMY+KCG L + LF K+ SWNAM+ Y HG D +I
Sbjct: 304 IQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAI 363
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
LF M E ++ + V+ +SVLSAC H GLVE+G +IF SM ++Y +K EHYAC+VD+
Sbjct: 364 ALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDL 423
Query: 431 LCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGF 490
L R+G E ++ +P+ + GA C +H L + ++ R P F
Sbjct: 424 LGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHF 483
Query: 491 VMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
V+LS+I A G W +A R M + ++K PG S VE +N+
Sbjct: 484 VVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNK 525
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 278/547 (50%), Gaps = 47/547 (8%)
Query: 36 HALLC---TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTG 92
HAL C + N++ S L+ +Y G V+ AR +FD +P N F + MV A
Sbjct: 140 HALACKIPSAVSNVYVCTS-LLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEK 198
Query: 93 NFQEAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
+EA F LM E ++F + VL A L + G+Q+H + + G + VSV
Sbjct: 199 CSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVE 258
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N+L+ MY+K G + +A VF ER+ ++W++MI+GY + D AV +F +M G
Sbjct: 259 NSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFT 318
Query: 212 PNQFTY-----------------------------------NAIIASYARRGDSNAAFAF 236
P +FT+ +A++ YA+ G A
Sbjct: 319 PTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEG 378
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F ++ + D+V W AM+SG Q+ EAL L+ M GI P+ T+ L+A
Sbjct: 379 FDQL----YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAG 434
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+++ G+++H + + GL + GSAL MYSKCG+L+D ++F ++V +WN++
Sbjct: 435 IAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSI 494
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I + ++G + +++LFE M EG + +T I++L ACSH GLV++G E F M + YG
Sbjct: 495 ISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYG 554
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
+ +HYAC+VD+L R+G + EA D + + + + C D+ G
Sbjct: 555 LTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAG 614
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEF 533
E E+G R +++LSNI A+ +W++ E +R +M+ + V K PG S VE + + F
Sbjct: 615 ERLMELGTRDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVF 674
Query: 534 VEKEVQN 540
V E Q+
Sbjct: 675 VVGEQQH 681
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 169/379 (44%), Gaps = 52/379 (13%)
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKC--GLLCSARRVFHGMFE--RDVVSWTSM 185
+ G+ +HA A + G + V N+LI+ YS LL +A VF + RDV SW S+
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSL 88
Query: 186 ISGYCNVSKVDEAVVLFERM-------------------------------------KLE 208
++ +D A+ F M K+
Sbjct: 89 LNPLSRHRPLD-ALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIP 147
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
N + +++ Y + G + A F M + +W+ M++G+A K EA
Sbjct: 148 SAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQR----NSFSWSTMVAGYAAEKCSEEA 203
Query: 269 LKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
LF+ ML + + T VL A + + +G ++H L+ + GL V ++L+
Sbjct: 204 FDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVT 263
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MY+K G + A +FE +R +N +W+AMI Y ++G DS++ +F +M G E T
Sbjct: 264 MYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFT 323
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLL 444
+ VL+A S G + G + + + G ++ + +VDM + G + +A +D L
Sbjct: 324 FVGVLNASSDLGALAVGKQA-HGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQL 382
Query: 445 RQVPMYVTNSM-AGAFRNG 462
+V + + +M +G +NG
Sbjct: 383 YEVDIVLWTAMVSGHVQNG 401
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 33/277 (11%)
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGV 290
AAFA F + D+ +WN++++ ++ R +AL F+ ML S + P+ +
Sbjct: 67 AAFAVFDDIPPAA--RDVASWNSLLNPLSR-HRPLDALSRFRSMLSSSTVLPSPHSFAAA 123
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHI-DVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
A S G HAL C++ + +V+ ++L++MY K G + DAR +F+ +N
Sbjct: 124 FTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRN 183
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACS-----------H 397
SW+ M+ Y + + +LF MLEE +E +VLSA S H
Sbjct: 184 SFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMH 243
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA- 456
G +V+ GL F S++ +V M ++G M A+ + NS+
Sbjct: 244 GLIVKDGLLDFVSVENS------------LVTMYAKAGCMGAAFHVFESS--RERNSITW 289
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
A G +G D AV+M + G P F +
Sbjct: 290 SAMITGYAQNGEADSAVSMFSQMHAAGF-TPTEFTFV 325
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 179/558 (32%), Positives = 282/558 (50%), Gaps = 46/558 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL + +LR G Q+HA L + L + L+ +YA CG ++ A VFD +P N
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 69
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V +++ G +E + F MR N+FT S LKAC G + G Q+H
Sbjct: 70 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHG 127
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
V + GFE V N+L+ MYSK ARRVF + R++ +W SMISGY + + +
Sbjct: 128 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 187
Query: 198 AVVLFERMKLEGLE-PNQFTYNAII----------------ASYARRGDSNAAFAFFSRM 240
++++F M+ E P++FT+ +++ A+ A RG S A+ A +
Sbjct: 188 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 247
Query: 241 TAEGFVP-----------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ +V + + W +I G AQ + EA+ LF+ SG++ +
Sbjct: 248 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRAD 307
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
++ V+ ++ G+++H + +DV ++L+DMY KCG +A F
Sbjct: 308 GHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFR 367
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+NV SW AMI GKHG +I+LFE M EG+ A+EV +++LSACSH GLV++
Sbjct: 368 EMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDE 427
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
F + + ++ EHYAC+VD+L R+G + EA +L+ +PM T + + C
Sbjct: 428 CRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSAC 487
Query: 464 NIHGRRDLAV--TMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
+H +D+AV +G+ + P +VMLSNI A GEW E + +R M+ K ++KQ
Sbjct: 488 RVH--KDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQ 545
Query: 522 PGFSRVEKRNEFVEKEVQ 539
G S E V+KEV
Sbjct: 546 GGCSWTE-----VDKEVH 558
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 100/246 (40%), Gaps = 30/246 (12%)
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ +L+A S++ G ++HA + ++G D + LIDMY+KCG L A +F+
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS---------H 397
+NV SW A++ + HG + LF M G NE TL + L AC H
Sbjct: 67 ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIH 126
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
G V G E + V SK + +G +D++ + NSM
Sbjct: 127 GVCVRTGFEGHDVVANSLVVMYSKGRW---------TGDARRVFDVIPSRNLATWNSMIS 177
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLR---KPDGFVMLS--NICAADGEWHEAENLRKI 512
+ + GR L V F EM R +PD F S C+ G E +
Sbjct: 178 GYAHAGQ--GRDSLLV-----FREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAA 230
Query: 513 MKEKNV 518
M + V
Sbjct: 231 MAVRGV 236
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 182/562 (32%), Positives = 278/562 (49%), Gaps = 35/562 (6%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAG 59
M R FP+N V L ++ C + + G +HAL LN + +L + LV +Y
Sbjct: 32 MMRSGFPLN---VASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGK 88
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
GDV ++ VFD + N N + G + + + F M E T S +
Sbjct: 89 FGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSL 148
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
L A V L G++VH + + + D+ V N+L+DMY+K G L A +F M +R+V
Sbjct: 149 LPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNV 208
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD---------- 229
VSW +MI+ EA L M+ G PN T ++ + AR
Sbjct: 209 VSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAW 268
Query: 230 ------------SNAAFAFFS--------RMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
SNA +S R E D V++N +I G++QS E+L
Sbjct: 269 SIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSEKDDVSYNTLILGYSQSPWCFESL 328
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
LFK M GI + V+ G L A + G+EIH ++ R L F ++L+D+Y
Sbjct: 329 LLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLY 388
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
+K G L A +F K+VASWN MI YG HG +D + ELFE M +G+ + V+ I
Sbjct: 389 TKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYI 448
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
+VL+ACSHGGLV+KG + F M + ++ + HYAC+VD+L R+G++ + +++R +P
Sbjct: 449 AVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPF 507
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENL 509
+ + GA C IHG +LA E FE+ + ++ N+ A G W+EA +
Sbjct: 508 PANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKI 567
Query: 510 RKIMKEKNVQKQPGFSRVEKRN 531
RK+MK + VQK P +S V+ ++
Sbjct: 568 RKLMKSRKVQKNPAYSWVQDQD 589
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 225/493 (45%), Gaps = 59/493 (11%)
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+P +V N +V A G F +A M + N + V+ AC + K G
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+HA+A ++G V++ NAL+DMY K G + ++ +VF GM E++ VSW S I + N
Sbjct: 61 LSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNA 120
Query: 193 SKVDEAVVLFERMKLEGLEPNQ-----------------------------------FTY 217
+ + +F +M + P F
Sbjct: 121 GFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVA 180
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
N+++ YA+ G A F +M ++V+WNAMI+ Q+ E EA +L M
Sbjct: 181 NSLVDMYAKFGSLEKASTIFEQMKDR----NVVSWNAMIANLVQNGAETEAFRLVTDMQK 236
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
SG PN++T+ VL A S+++G++IHA R GL D+F +ALIDMYSKCG L
Sbjct: 237 SGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSL 296
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
AR +FE + K+ S+N +I Y + S+ LF++M G+ + V+ + LSAC++
Sbjct: 297 ARNIFERSE-KDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTN 355
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
+ + G EI + R +S + ++D+ + G +V A + ++ S
Sbjct: 356 LSVFKHGKEIHCVLVRRL---LSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASW 412
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG-------FVMLSNICAADGEWHEAEN 508
G +HG+ D+A E FE L K DG ++ + C+ G + +
Sbjct: 413 NTMIL-GYGMHGQIDIAF----ELFE--LMKGDGLDYDHVSYIAVLAACSHGGLVDKGKK 465
Query: 509 LRKIMKEKNVQKQ 521
M +N++ Q
Sbjct: 466 YFSQMVAQNIEPQ 478
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 241/450 (53%), Gaps = 41/450 (9%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+ VL C+ I++G++VHA + +E V + LI +Y+KC L ARRV M
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------ 223
ER+VVSWT+MISGY EA+ LF M + G PN+FT+ ++ S
Sbjct: 540 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 599
Query: 224 -----------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
YA+ G A F + D+V+ A+ISG+A
Sbjct: 600 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER----DVVSCTAIISGYA 655
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q + EAL LF+ + G++ N VT VL A ++ GR++H+ V R L V
Sbjct: 656 QLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVV 715
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
++LIDMYSKCGSL +R +F+ + V SWNAM+ Y KHG+ ++ELF+ M EE
Sbjct: 716 LQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEEN 775
Query: 381 -MRANEVTLISVLSACSHGGLVEKGLEIFRSM-KERYGVKISKEHYACVVDMLCRSGRMV 438
++ + VT ++VLS CSHGG+ ++GLEIF M ++ G + EHY CVVD+ R+GR+
Sbjct: 776 KVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVE 835
Query: 439 EAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
EA++ ++++P T ++ G+ C +H + + E+ +V+LSN+ A
Sbjct: 836 EAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYA 895
Query: 499 ADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ G W + +R++MKEK V K+PG S +E
Sbjct: 896 SAGRWDDVRTVRELMKEKAVIKEPGRSWIE 925
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 212/434 (48%), Gaps = 51/434 (11%)
Query: 8 INNLSVNY--LDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVN 64
I L V + D +L +C+ A+R+G++VHA ++ T L+++L+ +Y C +
Sbjct: 470 IQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLG 529
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
AR V D++P NV ++W M S ++ G EA+ F M N+FTF+ VL +
Sbjct: 530 DARRVLDEMPERNV--VSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 587
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C + G+Q+H++ + FE+ + VG++L+DMY+K G +C ARRVF G+ ERDVVS
Sbjct: 588 CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSC 647
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------- 217
T++ISGY + +EA+ LF R++ EG+ N TY
Sbjct: 648 TAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLR 707
Query: 218 ----------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
N++I Y++ G + F M +++WNAM+ G+++ E
Sbjct: 708 AKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPER----TVISWNAMLVGYSKHGLGRE 763
Query: 268 ALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVC--RMGLHIDVFTGSA 324
A++LFK M +KP++VT VL G G EI + + G ++
Sbjct: 764 AVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGC 823
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLE-EGMR 382
++D++ + G +++A + + A+ W +++G H V + R+LE E
Sbjct: 824 VVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESEN 883
Query: 383 ANEVTLISVLSACS 396
A ++S L A +
Sbjct: 884 AGNYVILSNLYASA 897
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 161/341 (47%), Gaps = 19/341 (5%)
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNV-------SKVDEAVVLFERMKLEGLEPNQFT 216
LCS R++ + E + GY +V + + E + M EP +
Sbjct: 455 LCSNRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYL 514
Query: 217 YNAIIASYAR---RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
+I Y + GD+ R+ E ++V+W AMISG++Q +EAL LF
Sbjct: 515 RTRLIVLYNKCRCLGDAR-------RVLDEMPERNVVSWTAMISGYSQRGYASEALHLFV 567
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG 333
ML+SG PN T VL + + Q+GR+IH+LV + +F GS+L+DMY+K G
Sbjct: 568 EMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAG 627
Query: 334 SLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
+ +AR +F+ ++V S A+I Y + G+ + +++LF R+ EGMR+N VT SVL+
Sbjct: 628 KICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLT 687
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN 453
A S ++ G ++ S R + ++DM + G + + + +P
Sbjct: 688 ALSGLAALDHGRQV-HSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVI 746
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
S A G + HG AV + + E KPD L+
Sbjct: 747 SW-NAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLA 786
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/551 (29%), Positives = 270/551 (49%), Gaps = 73/551 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + + L GKQ+H + +D ++ + + LV VY CGD+ A +F K N
Sbjct: 303 VLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKN 362
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLM--------------------REFIY-------- 109
V N M++ +G+ +A F M R F++
Sbjct: 363 VLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQ 422
Query: 110 --------RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC 161
+ FT VL AC + +++GK++HA A G ++D VG AL++MYSKC
Sbjct: 423 NMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKC 482
Query: 162 GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII 221
L +A+ F + E+DV +W NA+I
Sbjct: 483 QDLTAAQVAFDEVMEKDVPTW-----------------------------------NALI 507
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ Y R +M +G+ P++ TWN++++G ++++ + ++LF M +S ++
Sbjct: 508 SGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLR 567
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ TV +L A +++ G++ HA + G DV G+AL+DMY+KCGSLK A+
Sbjct: 568 PDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLA 627
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
++ N+ S NAM+ HG + I LF+ ML G + VT +SVLS+C H G V
Sbjct: 628 YDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVGSV 687
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
E G E F M Y VK + +HY +VD+L RSG++ EAY+L++++P+ + + GA
Sbjct: 688 ETGCEFFDLMG-YYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLG 746
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
GC HG +L E E+ +V+L+N+ A W + +R +MK++ + K
Sbjct: 747 GCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDLARVRGMMKDRGMHKS 806
Query: 522 PGFSRVEKRNE 532
PG S +E +NE
Sbjct: 807 PGCSWIEDKNE 817
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 202/429 (47%), Gaps = 48/429 (11%)
Query: 27 KALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
K + GKQVHA D + F + +KL+ +YA CG + A +F+ +P N+ +W
Sbjct: 73 KCPKLGKQVHAHTIKTGFDADGF-IDTKLLQMYARCGLLKDADFLFETMPMRNLH--SWK 129
Query: 85 VMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
+ S + G F+EA F +++ + F F +V KAC GL ++ G+Q+H + +
Sbjct: 130 AILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKF 189
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
F ++ V NALIDMY KCG L A++V M ERD V+W S+I+ V EA+
Sbjct: 190 RFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFL 249
Query: 203 ERMK-LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
E+MK L+ PN +++A+I +A+ G A RM EG V
Sbjct: 250 EKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLV--------------- 294
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
PN T+ GVL A + +G+++H + R +
Sbjct: 295 --------------------PNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVV 334
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
+AL+D+Y +CG + A +F +KNV S N MI Y + G V + ELF+ M G+
Sbjct: 335 VNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGI 394
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK-----ISKEHYACVVDMLCRSGR 436
++ S++S + ++ +F++M G++ + AC + R G+
Sbjct: 395 ERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGK 454
Query: 437 MVEAYDLLR 445
+ A +++
Sbjct: 455 EIHAQAIVK 463
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 152/328 (46%), Gaps = 45/328 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C + +LRQGK++HA L + + LV +Y+ C D+ +A++ FD++
Sbjct: 437 LGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVM 496
Query: 75 NPNVFMLNWMVMASAFTGNFQ-EAIGY--------------------------------- 100
+V W + S +T + Q E I Y
Sbjct: 497 EKDV--PTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLT 554
Query: 101 ---FSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDM 157
FS M+ R + +T I+L AC L +++GKQ HA + + G++ DV +G AL+DM
Sbjct: 555 MQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDM 614
Query: 158 YSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
Y+KCG L A+ + + ++VS +M++ +E + LF+ M G P+ T+
Sbjct: 615 YAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTF 674
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
++++S G FF M P L + +M+ ++S + +EA +L K M V
Sbjct: 675 LSVLSSCVHVGSVETGCEFFDLMGYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPV 734
Query: 278 SGIKPNNVTVTGVLQAGGLT-GSIQIGR 304
+ + G L G +T G+I++G
Sbjct: 735 EC----DSVLWGALLGGCVTHGNIELGE 758
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 241/460 (52%), Gaps = 44/460 (9%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+ T+S ++K C +++GK+VH G+E + V N L++MY K LL A +F
Sbjct: 54 DAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLF 113
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYN------------- 218
M ER+VVSWT+MIS Y N D+A+ M EG+ PN FTY+
Sbjct: 114 DEMPERNVVSWTTMISAYSNKLN-DKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR 172
Query: 219 -------------------AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
A+I Y++ D + A F M DLV WN++I GF
Sbjct: 173 QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTR----DLVVWNSIIGGF 228
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
AQ+ NEAL LFK M +G + T+T VL+A +++GR++H V + D+
Sbjct: 229 AQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQ--DL 286
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+ALIDMY KCGSL+DA + F K+V SW+ M+ ++G ++ELFE M E
Sbjct: 287 ILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKES 346
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G R N +T++ VL ACSH GLVEKG FRSMK+ +GV +EHY C++D+L R+GR+ E
Sbjct: 347 GSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDE 406
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A L+ ++ + C +H DLA+ ++ E+ +++LSNI A
Sbjct: 407 AVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYAN 466
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQ 539
W + +RK M + ++K PG S +E V+K++
Sbjct: 467 TQRWEDVAEVRKTMTNRGIRKTPGCSWIE-----VDKQIH 501
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 209/437 (47%), Gaps = 55/437 (12%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ C A+++GK+VH + C + + L+ +Y + A +FD++P N
Sbjct: 61 LIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERN 120
Query: 78 VFMLNWMVMASAFTGNFQE-AIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
V ++W M SA++ + A+ LM R N FT+S VL+AC GL +++ Q+H
Sbjct: 121 V--VSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR---QLH 175
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ G E+DV V +ALID+YSK L +A VF M RD+V W S+I G+ S +
Sbjct: 176 CGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGN 235
Query: 197 EAVVLFERMKLEGLEPNQFTY---------------------------------NAIIAS 223
EA+ LF+RMK G +Q T NA+I
Sbjct: 236 EALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALIDM 295
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
Y + G A + FSRM + D+++W+ M++G AQ+ +AL+LF+ M SG +PN
Sbjct: 296 YCKCGSLEDANSAFSRMVEK----DVISWSTMVAGLAQNGYSRQALELFESMKESGSRPN 351
Query: 284 NVTVTGVLQAGGLTGSIQIG----REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA- 338
+TV GVL A G ++ G R + L G+ LID+ + G L +A
Sbjct: 352 YITVLGVLFACSHAGLVEKGWYYFRSMKKL---FGVDPGREHYGCLIDLLGRAGRLDEAV 408
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSACSH 397
+ + E+ + +W ++G H VD +I ++++E E A L+S + A +
Sbjct: 409 KLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQ 468
Query: 398 GGLVEKGLEIFRSMKER 414
E E+ ++M R
Sbjct: 469 RW--EDVAEVRKTMTNR 483
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 139/272 (51%), Gaps = 18/272 (6%)
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
HG+F D ++++ +I V E + E + +G EP F N ++ Y +
Sbjct: 49 HGVFA-DAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLE 107
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A F M ++V+W MIS ++ +K ++ALK M G++PN T + VL
Sbjct: 108 EAEDLFDEMPER----NVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVL 162
Query: 292 QA-GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
+A GL R++H + + GL DVF SALID+YSK L +A +F+ +++
Sbjct: 163 RACDGLPNL----RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDL 218
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
WN++IG + ++ + ++ LF+RM G A++ TL SVL AC+ L+E G ++
Sbjct: 219 VVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVH 278
Query: 411 MKERYGVKISKEHYA--CVVDMLCRSGRMVEA 440
+ +K ++ ++DM C+ G + +A
Sbjct: 279 V-----LKFDQDLILNNALIDMYCKCGSLEDA 305
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
+ F + A++ M G+ + +T + +++ G++Q G+ +H + G
Sbjct: 28 ANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYE 87
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+F + L++MY K L++A LF+ +NV SW MI Y + + D +++ M
Sbjct: 88 PKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILM 146
Query: 377 LEEGMRANEVTLISVLSACS--------HGGLVEKGLE 406
EG+R N T SVL AC H G+++ GLE
Sbjct: 147 FREGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLE 184
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/529 (33%), Positives = 280/529 (52%), Gaps = 51/529 (9%)
Query: 26 SKALRQGKQVHA-LLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
S L + KQ+H ++ + L++ + L + LV Y G+ A VF ++P+P+V N
Sbjct: 143 SSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNV 202
Query: 84 MVMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
M++ A G EA+ YF ++ + I +++T +L C L DI+ GK VH +
Sbjct: 203 MIVGYAKQGFSLEALKLYFKMVSDGI-EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERR 261
Query: 143 G--FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
G + +++ + NAL+DMY KC A+R F M ++D+ SW +M+ G+
Sbjct: 262 GPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGF----------- 310
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
R GD AA A F +M DLV+WN+++ G++
Sbjct: 311 ------------------------VRLGDMEAAQAVFDQMPKR----DLVSWNSLLFGYS 342
Query: 261 QSKRENEALK-LFKGM-LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
+ + ++ LF M +V +KP+ VT+ ++ G + GR +H LV R+ L D
Sbjct: 343 KKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGD 402
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
F SALIDMY KCG ++ A +F+ K+VA W +MI HG +++LF RM E
Sbjct: 403 AFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE 462
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
EG+ N VTL++VL+ACSH GLVE+GL +F MK+++G EHY +VD+LCR+GR+
Sbjct: 463 EGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVE 522
Query: 439 EAYDLL-RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
EA D++ +++PM + SM G+ + C + A E ++ K G+V+LSNI
Sbjct: 523 EAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIY 582
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSR---VEKRNEFVEKEVQNESK 543
A G W ++ R+ M+ + V+K G+S VE + FV E QN +
Sbjct: 583 ATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPR 631
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 154/344 (44%), Gaps = 24/344 (6%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
S + +VG + GD+ +A+ VFD++P ++ N ++ + G Q + RE
Sbjct: 302 SWNTMVVG-FVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTV------REL 354
Query: 108 IY--------RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYS 159
Y + ++ T ++ ++ G+ VH + ++ + D + +ALIDMY
Sbjct: 355 FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYC 414
Query: 160 KCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNA 219
KCG++ A VF E+DV WTSMI+G +A+ LF RM+ EG+ PN T A
Sbjct: 415 KCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLA 474
Query: 220 IIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
++ + + G F+ M + GF P+ + +++ ++ R EA + + +
Sbjct: 475 VLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKM-- 532
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI-DMYSKCGSL-- 335
++P+ +L A G I AL + L + G L+ ++Y+ G
Sbjct: 533 PMRPSQSMWGSILSA--CRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGY 590
Query: 336 -KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
R E +K A +++++G G H V + + R E
Sbjct: 591 SDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTE 634
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 38/286 (13%)
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
P++ +N MIS + SK NE L+ M+ + P+ T +++A + ++I
Sbjct: 98 PNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQI 152
Query: 307 HALVCRMG-LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
H + G L + + ++L+ Y + G+ A +F +V+S+N MI Y K G
Sbjct: 153 HCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGF 212
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
+++L+ +M+ +G+ +E T++S+L C H + G + ++ R V S +
Sbjct: 213 SLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILS 272
Query: 426 -CVVDML--CR-SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG---------RRDLA 472
++DM C+ SG A+D +++ M N+M F ++ +RDL
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 473 V----------------TMGEEFFEMGL---RKPDGFVMLSNICAA 499
T+ E F+EM + KPD M+S I A
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGA 378
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 182/562 (32%), Positives = 278/562 (49%), Gaps = 35/562 (6%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAG 59
M R FP+N V L ++ C + + G +HAL LN + +L + LV +Y
Sbjct: 211 MMRSGFPLN---VASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGK 267
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
GDV ++ VFD + N N + G + + + F M E T S +
Sbjct: 268 FGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSL 327
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
L A V L G++VH + + + D+ V N+L+DMY+K G L A +F M +R+V
Sbjct: 328 LPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNV 387
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD---------- 229
VSW +MI+ EA L M+ G PN T ++ + AR
Sbjct: 388 VSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAW 447
Query: 230 ------------SNAAFAFFS--------RMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
SNA +S R E D V++N +I G++QS E+L
Sbjct: 448 SIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSEKDDVSYNTLILGYSQSPWCFESL 507
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
LFK M GI + V+ G L A + G+EIH ++ R L F ++L+D+Y
Sbjct: 508 LLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLY 567
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
+K G L A +F K+VASWN MI YG HG +D + ELFE M +G+ + V+ I
Sbjct: 568 TKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYI 627
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
+VL+ACSHGGLV+KG + F M + ++ + HYAC+VD+L R+G++ + +++R +P
Sbjct: 628 AVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPF 686
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENL 509
+ + GA C IHG +LA E FE+ + ++ N+ A G W+EA +
Sbjct: 687 PANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKI 746
Query: 510 RKIMKEKNVQKQPGFSRVEKRN 531
RK+MK + VQK P +S V+ ++
Sbjct: 747 RKLMKSRKVQKNPAYSWVQDQD 768
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 237/513 (46%), Gaps = 59/513 (11%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
LV YA CG AR VFD++P +V N +V A G F +A M + N
Sbjct: 160 LVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLN 219
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
+ V+ AC + K G +HA+A ++G V++ NAL+DMY K G + ++ +VF
Sbjct: 220 VASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFD 279
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ------------------ 214
GM E++ VSW S I + N + + +F +M + P
Sbjct: 280 GMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDL 339
Query: 215 -----------------FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
F N+++ YA+ G A F +M ++V+WNAMI+
Sbjct: 340 GREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDR----NVVSWNAMIA 395
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
Q+ E EA +L M SG PN++T+ VL A S+++G++IHA R GL
Sbjct: 396 NLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMF 455
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
D+F +ALIDMYSKCG L AR +FE + K+ S+N +I Y + S+ LF++M
Sbjct: 456 DLFISNALIDMYSKCGQLSLARNIFERSE-KDDVSYNTLILGYSQSPWCFESLLLFKQMR 514
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSG 435
G+ + V+ + LSAC++ + + G EI + R +S + ++D+ + G
Sbjct: 515 SVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRL---LSGHPFLSNSLLDLYTKGG 571
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG------ 489
+V A + ++ S G +HG+ D+A E FE L K DG
Sbjct: 572 MLVTASKIFNKITKKDVASWNTMIL-GYGMHGQIDIAF----ELFE--LMKGDGLDYDHV 624
Query: 490 -FVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
++ + C+ G + + M +N++ Q
Sbjct: 625 SYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQ 657
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 199/439 (45%), Gaps = 44/439 (10%)
Query: 47 FSLKSKLVGVYAGCGDVNSARLVFDKIPNP--NVFMLNWMVMASAFTGNFQEAIGYFSLM 104
L L+ YA D+ SARLV P + F+ N + A + EA+ ++LM
Sbjct: 49 LPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRALSSASLPSEALRVYNLM 108
Query: 105 REFIYRCNK--FTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
R + F F++ A KG ++HA A + G DV GN L+ Y+ CG
Sbjct: 109 LRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNTLVAFYAACG 168
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----- 217
C ARRVF M ERDVVSW S++S + +A M G N +
Sbjct: 169 KACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVP 228
Query: 218 ------------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
NA++ Y + GD A+ F M +
Sbjct: 229 ACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQ---- 284
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
+ V+WN+ I F + + L++F+ M + P ++T++ +L A GS +GRE+H
Sbjct: 285 NEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVH 344
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+ + +D+F ++L+DMY+K GSL+ A T+FE + +NV SWNAMI ++G
Sbjct: 345 GYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAET 404
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+ L M + G N +TL++VL AC+ ++ G +I + R G+ +
Sbjct: 405 EAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQI-HAWSIRRGLMFDLFISNAL 463
Query: 428 VDMLCRSGRMVEAYDLLRQ 446
+DM + G++ A ++ +
Sbjct: 464 IDMYSKCGQLSLARNIFER 482
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 6/216 (2%)
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI--QIGREIHAL 309
WN++ + + +EAL+++ ML S ++P++ T L A + G E+HA
Sbjct: 85 WNSLSRALSSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHAS 144
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
R G DVFTG+ L+ Y+ CG DAR +F+ ++V SWN+++ + +GM +
Sbjct: 145 ALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDA 204
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
M+ G N +L+SV+ AC + GL I ++ + G+ +VD
Sbjct: 205 RRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSI-HALAVKVGLNTMVNLANALVD 263
Query: 430 MLCRSGRM---VEAYDLLRQVPMYVTNSMAGAFRNG 462
M + G + ++ +D + + NS G F N
Sbjct: 264 MYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNA 299
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/566 (31%), Positives = 285/566 (50%), Gaps = 47/566 (8%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCT----NDLNIFSLKSKLVGVY 57
+R+++ V C+L C R G++VHA + ++++ + L+ +Y
Sbjct: 178 HRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLN---ALMTMY 234
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS 117
A CGDV +AR VFD + + N M+ G + F M + N T +
Sbjct: 235 AKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTIT 294
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
V A L D+ K++H +A + GF DV+ N+LI MY+ G++ AR VF M R
Sbjct: 295 SVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTR 354
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------- 217
D ++WT+MISGY D+A+ ++ M++ + P+ T
Sbjct: 355 DAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLH 414
Query: 218 ---------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
NAI+ YA+ + A F M + D+V+W++MI+GF +
Sbjct: 415 ELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEK----DVVSWSSMIAGFCFN 470
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
R EAL F+ ML + +KPN+VT L A TG+++ G+EIHA V R G+ + +
Sbjct: 471 HRNFEALYYFRHML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLP 529
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+ALID+Y KCG A F K+V SWN MI + HG D+++ F +M++ G
Sbjct: 530 NALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGEC 589
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
+EVT +++L ACS GG+V +G E+F SM E+Y + + +HYAC+VD+L R+G++ EAY+
Sbjct: 590 PDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYN 649
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
+ ++P+ ++ GA NGC IH +L + + V+L ++ A
Sbjct: 650 FINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACL 709
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVE 528
W + +RK M+EK + G S VE
Sbjct: 710 WDKLARVRKTMREKGLDHDSGCSWVE 735
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 232/498 (46%), Gaps = 55/498 (11%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
G+ A VF K+P +VF N MV +G EA+ + M R + +TF VL
Sbjct: 137 GETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVL 196
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
++C G+ D + G++VHA + GF +V V NAL+ MY+KCG + +AR+VF M D +
Sbjct: 197 RSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCI 256
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------- 217
SW +MI+G+ + + + LF M + ++PN T
Sbjct: 257 SWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLA 316
Query: 218 ------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
N++I YA G A FSRM D +TW AMISG+ ++
Sbjct: 317 VKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTR----DAMTWTAMISGYEKNGFP 372
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
++AL+++ M V+ + P+++T+ L A GS+ +G ++H L G + +A+
Sbjct: 373 DKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAI 432
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
++MY+K + A +F+ K+V SW++MI + + ++ F ML + ++ N
Sbjct: 433 LEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNS 491
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL- 444
VT I+ L+AC+ G + G EI + R G++ ++D+ + G+ A+
Sbjct: 492 VTFIAALAACAATGALRSGKEIHAHVL-RCGIEYEGYLPNALIDLYVKCGQTGYAWAQFC 550
Query: 445 ----RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICA 498
+ V + N M F HG D A++ + ++G PD FV L C+
Sbjct: 551 AHGAKDVVSW--NIMIAGFV----AHGHGDTALSFFNQMVKIG-ECPDEVTFVALLCACS 603
Query: 499 ADGEWHEAENLRKIMKEK 516
G E L M EK
Sbjct: 604 RGGMVSEGWELFHSMTEK 621
>gi|414888053|tpg|DAA64067.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 754
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 175/533 (32%), Positives = 279/533 (52%), Gaps = 44/533 (8%)
Query: 33 KQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
+Q+HAL+ + ++F + + LV YA +++AR VF+++P ++ N +V A
Sbjct: 177 RQLHALVSRAGIAADVF-VGNALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQ 235
Query: 91 TGNFQEAI--GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
G + + +++ R ++ + V+ AC G ++ G+Q+H A ++G E V
Sbjct: 236 DGECPAEVIRVFLRMLKHGGVRPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHV 295
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
S+ N L+ MY KCG ARR+F M ERDVVSWT+++S ++AV LF M +
Sbjct: 296 SIANVLVAMYYKCGTPGCARRLFEFMGERDVVSWTTVMS-----MDREDAVSLFNGMMRD 350
Query: 209 GLEPNQFTYNAIIASY-----ARRG-------------DSNAA-------FAFFSRMTAE 243
G+ PN+ T+ AI+++ AR G D AA +A RM
Sbjct: 351 GVAPNEVTFVAILSAMPGHCPAREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDA 410
Query: 244 GFV------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA--GG 295
+ P+++ WNA+ISG+AQ++ +AL+ F M V KP+ T +L A
Sbjct: 411 KMIFGLMPHPEVIAWNALISGYAQNEMCQDALEAFLSM-VKITKPSETTFASILSAVTAV 469
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
T S+ G+ H ++GL + ALID+Y+K GSL+++ F T +++ +W A
Sbjct: 470 ETVSMAYGQMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEESWKAFGETVHRSLIAWTA 529
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
+I KHG D + LF M G+ + V L+SVL+AC + G G EIF SM ++
Sbjct: 530 IISANSKHGNYDGVVSLFNDMARSGVTPDGVVLLSVLTACRYSGFASLGREIFESMATKH 589
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTM 475
G ++ EHYACVVDML R+GR+ EA +L+ Q+P + S + C IHG D+ +
Sbjct: 590 GAELWPEHYACVVDMLGRAGRLEEAEELMLQMPSGPSVSAMQSLLGACRIHGNTDVGERV 649
Query: 476 GEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
E + +V+LSNI A G+W +R+ M+ V+K+ GFS V+
Sbjct: 650 AGVLLETEPTESGAYVLLSNIYAEKGDWGAVARVRRKMRGMGVKKEVGFSWVD 702
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 231/502 (46%), Gaps = 51/502 (10%)
Query: 35 VHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN 93
+HAL + L F+ + + L YA +A VF P+ + N ++ A T +
Sbjct: 80 LHALAVISGLAAFAPVTNSLAARYAKGNSFAAAARVFAAAPSRDTSSYNTILSA---TPD 136
Query: 94 FQEAIGYFS-LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGN 152
+A+ + + ++R R + TF++ L G + + +Q+HA+ ++ G DV VGN
Sbjct: 137 PDDALAFAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLVRQLHALVSRAGIAADVFVGN 196
Query: 153 ALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV-LFERM-KLEGL 210
AL+ Y++ L +AR+VF M RD+VSW +++ G + V+ +F RM K G+
Sbjct: 197 ALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQDGECPAEVIRVFLRMLKHGGV 256
Query: 211 EPNQFTYNAIIASYARRGD---SNAAFAFFSRMTAEGFVP-------------------- 247
P++ + ++I++ G F ++ EG V
Sbjct: 257 RPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVSIANVLVAMYYKCGTPGCARR 316
Query: 248 --------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
D+V+W ++S RE+ A+ LF GM+ G+ PN VT +L A
Sbjct: 317 LFEFMGERDVVSWTTVMS----MDRED-AVSLFNGMMRDGVAPNEVTFVAILSAMPGHCP 371
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
+ G+ +HA+ + GL ++ I MY+K + DA+ +F + V +WNA+I
Sbjct: 372 AREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKMIFGLMPHPEVIAWNALISG 431
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL-EIFRSMKERYGVK 418
Y ++ M ++E F M++ + +E T S+LSA + V +++ + G+
Sbjct: 432 YAQNEMCQDALEAFLSMVKI-TKPSETTFASILSAVTAVETVSMAYGQMYHCQTLKLGLG 490
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG--AFRNGCNIHGRRDLAVTMG 476
S+ ++D+ + G + E++ + V S+ A + + HG D V++
Sbjct: 491 ASEYVSGALIDLYAKRGSLEESWKAFGET---VHRSLIAWTAIISANSKHGNYDGVVSLF 547
Query: 477 EEFFEMGLRKPDGFVMLSNICA 498
+ G+ PDG V+LS + A
Sbjct: 548 NDMARSGV-TPDGVVLLSVLTA 568
>gi|297805312|ref|XP_002870540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316376|gb|EFH46799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 149/488 (30%), Positives = 255/488 (52%), Gaps = 33/488 (6%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLL 127
VF+++P P ++ N ++ + F E + +MR R +++TF +V+K C
Sbjct: 62 VFERVPYPGTYLWNHLIKGYSNKFLFFETVSLLMRMMRTGFARPDEYTFPLVMKVCSNNA 121
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+ + G VH + ++GF+ DV +G + +D Y KC LCSAR+VF M ER+VVSWT++I
Sbjct: 122 EFRVGSTVHGLVLRIGFDKDVVLGTSFVDFYGKCKDLCSARKVFGEMPERNVVSWTALIV 181
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
Y +++EA +F+ M E N T+NA++ + GD A F M +
Sbjct: 182 AYVKSGELEEAKRMFDLMP----ERNLGTWNALVDGLVKSGDLVNARKLFDEMPKRDIIS 237
Query: 248 ---------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
D+ W+A+I G+AQ+ + NEA K+F M +
Sbjct: 238 YTSMIDGYAKGGDMVSARDLFENARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNV 297
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCR-MGLHIDVFTGSALIDMYSKCGSLKDAR 339
KP+ + G++ A G ++ ++ + + + M + ALIDM +KCG + A
Sbjct: 298 KPDEFIMVGLMSACSQMGCFELCEKVDSYLHQSMNKFSSHYVIPALIDMNAKCGHMDRAA 357
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
LFE +++ S+ +M+ HG ++ LFE+M++EG+ +EV +L CS
Sbjct: 358 KLFEEMPQRDLVSYCSMMEGMAIHGCGSEAVRLFEKMVDEGIVPDEVAFTVILKVCSQSR 417
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVE+GL F M++ Y + S +HY+C+V++L R+G++ EAY+L++ +P S G+
Sbjct: 418 LVEEGLRYFELMRKEYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSL 477
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
GC++HG ++A + + FE+ + +V+LSNI AA W + +LR M E ++
Sbjct: 478 LGGCSLHGNTEIAEVVARQLFELEPQSAGSYVLLSNIYAALDRWADLAHLRDKMNENGIK 537
Query: 520 KQPGFSRV 527
K G S +
Sbjct: 538 KICGRSWI 545
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 269/538 (50%), Gaps = 39/538 (7%)
Query: 27 KALRQGKQVHALLCT----NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
K+L Q KQ H LL D + +L + +A A +VF + P+PN+F+ N
Sbjct: 14 KSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAA---TQYATVVFAQTPHPNIFLYN 70
Query: 83 WMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD-IKKGKQVHAVATQ 141
++ F++A+ ++ MR+ + + FTF VLKAC L G +H++ +
Sbjct: 71 TLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIK 130
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
GF+ DV V L+ +YSK G L AR+VF + E++VVSWT++I GY EA+ L
Sbjct: 131 TGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGL 190
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV--------------- 246
F + GL P+ FT I+ + +R GD + M G V
Sbjct: 191 FRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAK 250
Query: 247 ----------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
D+V W+A+I G+A + EAL +F M ++P+ + GV
Sbjct: 251 CGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGV 310
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
A G++++G L+ + G+ALID Y+KCGS+ A+ +F+ R K+
Sbjct: 311 FSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDC 370
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+NA+I G V ++ +F +M++ GM+ + T + +L C+H GLV+ G F
Sbjct: 371 VVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSG 430
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M + V + EHY C+VD+ R+G +VEA DL+R +PM + + GA GC +H
Sbjct: 431 MSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQ 490
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
LA + ++ E+ +V+LSNI +A W EAE +R + +K +QK PG S VE
Sbjct: 491 LAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVE 548
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 175/588 (29%), Positives = 289/588 (49%), Gaps = 110/588 (18%)
Query: 50 KSKLVGVYAGCGDVNSARLVFDKIP--NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
++ +V Y GD+ AR VF+K P + M N M+ + + AI F M+
Sbjct: 83 RTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 108 IYRCNKFTFSIVLKACVGLL--DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG--- 162
++ + FTF+ VL A + L+ D K+ Q HA A + G SV NAL+ +YSKC
Sbjct: 143 GFKPDNFTFASVL-AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSP 201
Query: 163 -LLCSARRVFHGMFERDVVSWTSM--------------------------------ISGY 189
LL SAR+VF + E+D SWT+M ISGY
Sbjct: 202 SLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGY 261
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------------- 217
N EA+ + RM G+E ++FTY
Sbjct: 262 VNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH 321
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS------------- 262
N++++ Y + G + A A F +M A+ DLV+WNA++SG+ S
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAK----DLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 263 KREN------------------EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
K +N E LKLF M G +P + +G +++ + G+ G+
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 305 EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHG 364
+ HA + ++G + G+ALI MY+KCG +++AR +F + SWNA+I G+HG
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHG 497
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY 424
+++++E ML++G+R + +TL++VL+ACSH GLV++G + F SM+ Y + +HY
Sbjct: 498 HGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHY 557
Query: 425 ACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
A ++D+LCRSG+ +A ++ +P T + A +GC +HG +L + ++ F +
Sbjct: 558 ARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIP 617
Query: 485 RKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+++LSN+ AA G+W E +RK+M+++ V+K+ S +E +
Sbjct: 618 EHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQ 665
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 186/416 (44%), Gaps = 61/416 (14%)
Query: 116 FSIVLKACVGL--LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
++ L+ C+ L ++ + VH GF+ + N LID+Y K L AR++F
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA 233
+ E D ++ T+M+SGYC + A +FE+ + + YNA+I ++ D +A
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPV--CMRDTVMYNAMITGFSHNNDGYSA 132
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQ-SKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
F +M EGF PD T+ ++++G A + E + ++ L SG
Sbjct: 133 INLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSG------------- 179
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS----LKDARTLFEITRIK 348
AG +T +AL+ +YSKC S L AR +F+ K
Sbjct: 180 AGYITS----------------------VSNALVSVYSKCASSPSLLHSARKVFDEILEK 217
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+ SW M+ Y K+G D EL E M ++ M+ V +++S + G ++ LE+
Sbjct: 218 DERSWTTMMTGYVKNGYFDLGEELLEGM-DDNMKL--VAYNAMISGYVNRGFYQEALEMV 274
Query: 409 RSMKERYGVKISKEHY-----ACVVDMLCRSGRMVEAYDLLRQ-VPMYVTNSMAGAFRNG 462
R M G+++ + Y AC L + G+ V AY L R+ + NS+ +
Sbjct: 275 RRMVSS-GIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYK- 332
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C G+ D A + F +M + + L + + G EA+ + K MKEKN+
Sbjct: 333 C---GKFDEARAI---FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/489 (32%), Positives = 261/489 (53%), Gaps = 41/489 (8%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N++S L G YA GDVN+AR +FD++ +V N +V+A A G F EAIG +
Sbjct: 128 NLYSWNHMLAG-YAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDF 186
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
R N F+F+ VL CV L +++ KQVH GF +++ + ++++D YSKCG +
Sbjct: 187 RRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEM 246
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
AR +F M +D+ +WT+++SG Y
Sbjct: 247 RCARTLFDEMLVKDIHAWTTIVSG-----------------------------------Y 271
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
A+ GD N+A F +M + + V+W+A+ISG+A++ +EAL F M+ GI P
Sbjct: 272 AKWGDMNSASELFHQMPEK----NPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQ 327
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
T + L A +++ G+++H + R + S+LIDMYSKCG L+ + +F +
Sbjct: 328 YTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHL 387
Query: 345 TRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
K +V WN MI ++G + ++++F M+E G++ + +T I +LSACSH GLV++
Sbjct: 388 MGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQE 447
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
GL F++M +GV +EHYAC++D+L R+G VE + L + + + A C
Sbjct: 448 GLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVC 507
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
IH +L + E E+ + +V L+++ A G+W E +R++M EK ++K+ G
Sbjct: 508 RIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERG 567
Query: 524 FSRVEKRNE 532
S ++ N+
Sbjct: 568 ISWIDVGNK 576
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 200/467 (42%), Gaps = 97/467 (20%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS-V 150
G EA+ Y + + R F +L+ C K GK VH GF+ + V
Sbjct: 41 GRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIV 100
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
N LI MY +CG AR+VF M R++ SW M++GY + V+ A LF+RM +
Sbjct: 101 ANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRM----M 156
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
E + ++N I+ +YA++G N A G D + + F+
Sbjct: 157 EKDVVSWNTIVLAYAKQGCFNEAI---------GLYRDFRRLDMGFNAFS---------- 197
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
F G+L+ +K +Q+ +++H V G ++ S+++D YS
Sbjct: 198 -FAGVLILCVK---------------LKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYS 241
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
KCG ++ ARTLF+ +K++ +W ++ Y K G ++S+ ELF +M E+ N V+ +
Sbjct: 242 KCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEK----NPVSWSA 297
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY-------ACVVDMLCRSGRMVEAYDL 443
++S + L + L+ F M ++G I+ E Y AC + G+ V Y L
Sbjct: 298 LISGYARNSLGHEALDYFTKMM-KFG--INPEQYTFSSCLCACASIAALKHGKQVHGY-L 353
Query: 444 LRQ------------VPMY-----------------------VTNSMAGAFRNGCNIHGR 468
+R + MY V N+M A N HG
Sbjct: 354 IRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQ--NGHGE 411
Query: 469 RDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIM 513
+ A+ M + E GL KPD F+++ + C+ G E K M
Sbjct: 412 K--AMQMFNDMVESGL-KPDRITFIVILSACSHSGLVQEGLRFFKAM 455
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 264/497 (53%), Gaps = 19/497 (3%)
Query: 34 QVHALLCTNDL--NIFSLKSKLV--GVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
Q HA L + L + F++ L + D+ A+ +F NP+ FM N ++MAS+
Sbjct: 29 QAHAHLIVSGLASHPFTVTRLLACAALSPSASDLPHAKTIFLHTHNPSPFMFNTIIMASS 88
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
T +++ ++ M + + FTF ++K+ G Q+HA + G + DV
Sbjct: 89 RT---LDSVTFYVCMLHAGHFPDNFTFPFLIKSSSASPTSLLGHQLHAHVVKFGLDRDVF 145
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFER-DVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
V N +I +YS L SAR+VF + DVVSWT++I+G+ N ++DEA +F+ M L+
Sbjct: 146 VVNNMIALYSSFRELRSARKVFDESYSLVDVVSWTTLITGFSNSGQIDEARKIFDLMPLK 205
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
N ++NA+I+ YA N A F M D +W+AM+SG++Q NEA
Sbjct: 206 ----NTVSWNAMISGYAGSSRINEARKLFDEMPDR----DAASWSAMVSGYSQLGMCNEA 257
Query: 269 LKLFKGMLVSGIK--PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
L LF M V+G K PN + + A +++ GR +H+ + L I+V G+ L+
Sbjct: 258 LDLFMEM-VTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKLRINVTLGTVLL 316
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
DMY KCGS+ DA +F + +NV SWN+MI +G ++ LF +M G N +
Sbjct: 317 DMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKEALALFWKMQFVGPSPNAI 376
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T I++L+ CSH GL+ +G +F M + YG+K +HY C+VD+L R+G + EA D + +
Sbjct: 377 TFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEK 436
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
+PM + + GA C IHG+ +L +G+ ++ + +L NI AA W +
Sbjct: 437 MPMKPHSELWGALVGACRIHGQVELGEELGKRLIDLEPHHGGRYALLCNIFAAAQRWDDV 496
Query: 507 ENLRKIMKEKNVQKQPG 523
+R + K + V K PG
Sbjct: 497 AMVRDLEKGRKVLKNPG 513
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 165/389 (42%), Gaps = 87/389 (22%)
Query: 32 GKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G Q+HA + D ++F + + ++ +Y+ ++ SAR VFD+ V +++W + +
Sbjct: 128 GHQLHAHVVKFGLDRDVFVVNN-MIALYSSFRELRSARKVFDE-SYSLVDVVSWTTLITG 185
Query: 90 F--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
F +G EA F LM +N
Sbjct: 186 FSNSGQIDEARKIFDLMP--------------------------------------LKNT 207
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM-- 205
VS NA+I Y+ + AR++F M +RD SW++M+SGY + +EA+ LF M
Sbjct: 208 VS-WNAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLGMCNEALDLFMEMVT 266
Query: 206 -------------------KLEGLEPNQFTYNAI---------------IASYARRGDSN 231
+L LE ++ ++ I + Y + G
Sbjct: 267 GDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKLRINVTLGTVLLDMYGKCGSIL 326
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A F+ M+ ++ +WN+MI+G A + EAL LF M G PN +T +L
Sbjct: 327 DAAGVFNLMSER----NVNSWNSMIAGLALNGCGKEALALFWKMQFVGPSPNAITFIALL 382
Query: 292 QAGGLTGSIQIGREIHALVCRM-GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
+G I GR + +++ ++ G+ + ++D+ + G +K+A E +K
Sbjct: 383 TGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEKMPMKPH 442
Query: 351 AS-WNAMIGCYGKHGMVDSSIELFERMLE 378
+ W A++G HG V+ EL +R+++
Sbjct: 443 SELWGALVGACRIHGQVELGEELGKRLID 471
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 10/217 (4%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C + +AL +G+ +H+ + L I +L + L+ +Y CG + A VF+ + NV
Sbjct: 284 CAQLRALEEGRWLHSYIKEKKLRINVTLGTVLLDMYGKCGSILDAAGVFNLMSERNVNSW 343
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
N M+ A G +EA+ F M+ N TF +L C I +G+ + ++ TQ
Sbjct: 344 NSMIAGLALNGCGKEALALFWKMQFVGPSPNAITFIALLTGCSHSGLITEGRWLFSMMTQ 403
Query: 142 M-GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ G + + ++D+ + GL+ A M + + G C ++ V
Sbjct: 404 VYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEKMPMKPHSELWGALVGAC---RIHGQVE 460
Query: 201 LFERM--KLEGLEPNQFTYNAI---IASYARRGDSNA 232
L E + +L LEP+ A+ I + A+R D A
Sbjct: 461 LGEELGKRLIDLEPHHGGRYALLCNIFAAAQRWDDVA 497
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/542 (28%), Positives = 272/542 (50%), Gaps = 32/542 (5%)
Query: 23 CMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C A R G Q+H D + + + + +YA C +++ A +F +P+ N+
Sbjct: 268 CAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSY 327
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
N M++ A +A F +++ + ++ + S L A + +G Q+H +A +
Sbjct: 328 NAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIK 387
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
+++ V NA++DMY KCG L A +F M RD VSW ++I+ + +
Sbjct: 388 SNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSH 447
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEG-----FV---------- 246
F M +EP++FTY +++ + A + + R+ G FV
Sbjct: 448 FGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSK 507
Query: 247 ----------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+V+WNA+ISGF+ K+ ++ + F ML G++P+N T V
Sbjct: 508 CGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATV 567
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L ++ +G++IHA + ++ L DV+ S L+DMYSKCG++ D+ +F ++
Sbjct: 568 LDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDS 627
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+WNAMI + HG+ + ++ELFE ML E ++ N T +SVL ACSH G +KGL F+
Sbjct: 628 VTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQK 687
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M Y ++ EHY+C+VD+L RSG++ EA L++ +P + + C I G +
Sbjct: 688 MASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVE 747
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+A ++ + +LSNI A G W + +R+ M+ N++K+PG S +E +
Sbjct: 748 VAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVK 807
Query: 531 NE 532
+E
Sbjct: 808 DE 809
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 247/517 (47%), Gaps = 58/517 (11%)
Query: 17 DCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+CL+ +K AL +V + D I S + + G AG G + A+ VF+ +P+
Sbjct: 63 NCLIQMYVKCCALEYAYKVFEEMPQRD--IVSWNTMVFGC-AGAGRMELAQAVFNSMPHH 119
Query: 77 -NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+V N ++ G+ Q++I F MR+ + T ++ LK C L D G Q+
Sbjct: 120 GDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQI 179
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H +A QMGF+ DV G+AL+DMY+KC L + VF + +++ +SW++ I+G ++
Sbjct: 180 HGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQL 239
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIAS-------------------------------- 223
+ LF+ M+ +G+ +Q TY ++ S
Sbjct: 240 LRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTAT 299
Query: 224 ---YARRGDSNAAFAFFSRMTAEGFVPD--LVTWNAMISGFAQSKRENEALKLFKGMLVS 278
YA+ + + A+ FS +PD L ++NAMI G+A++++ +A KLF + +
Sbjct: 300 LDMYAKCDNMSDAYKLFS------LLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKN 353
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+ V+++G L A + G ++H L + L ++ +A++DMY KCG+L +A
Sbjct: 354 SFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEA 413
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
LF+ I++ SWNA+I ++ ++ F ML M +E T SVL AC+
Sbjct: 414 SGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQ 473
Query: 399 GLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL---LRQVPMYVTNS 454
G+E+ R +K G+K+ + +VDM + G M EA + L + M N+
Sbjct: 474 RAFSNGMEVHGRIIKSGMGLKMFVG--SALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNA 531
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
+ F ++ + + + EMG+ +PD F
Sbjct: 532 IISGF----SLQKKSEDSQRFFSHMLEMGV-EPDNFT 563
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 155/335 (46%), Gaps = 41/335 (12%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
TFS + + C +K GK+ HA GF V V N LI MY KC L A +VF M
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
+RD+VSW +M+ G +++ A +F M G
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHG------------------------- 120
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
D+V+WN++ISG+ Q+ +++ +F M G+ ++ T+ L+
Sbjct: 121 -------------DVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKIC 167
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
L +G +IH + +MG DV TGSAL+DMY+KC SL+D+ +F KN SW+
Sbjct: 168 SLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWS 227
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF-RSMKE 413
A I ++ + ++LF+ M +G+ ++ T SV +C+ G ++ ++K
Sbjct: 228 AAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKT 287
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+G + +DM + M +AY L +P
Sbjct: 288 DFGSDVIVG--TATLDMYAKCDNMSDAYKLFSLLP 320
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 164/336 (48%), Gaps = 10/336 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C +A G +VH + + + + + S LV +Y+ CG + A + ++
Sbjct: 466 VLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQT 525
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
M++W + S F+ +++ +FS M E + FT++ VL C L + GKQ+
Sbjct: 526 --MVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQI 583
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA ++ +DV + + L+DMYSKCG + + +F +RD V+W +MI G+
Sbjct: 584 HAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLG 643
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA-EGFVPDLVTWNA 254
+EA+ LFE M E ++PN T+ +++ + + G++ +F +M + P L ++
Sbjct: 644 EEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSC 703
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M+ +S + EAL+L + M + + + +L + G++++ + + + ++
Sbjct: 704 MVDILGRSGQVEEALRLIQDM---PFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLD 760
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
D + L ++Y+ G + + + R N+
Sbjct: 761 PE-DSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNL 795
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 162/498 (32%), Positives = 253/498 (50%), Gaps = 42/498 (8%)
Query: 33 KQVHALLCTNDLNIFSLKSKLVG-VYAGCGDVNSARLVFDKIPN--PNVFMLNWMVMASA 89
+QVHA + + + L VG V A + A+ +F + P F+ N + A A
Sbjct: 45 RQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALA 104
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
+ +AI F +R++ + FT S VL+AC+ LLD+ G+ +H V ++GF +++
Sbjct: 105 EGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLY 164
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+ N ++ +Y+ CG + AR +F M +RDVV
Sbjct: 165 LQNMIVHLYASCGEMGEARLLFEKMPQRDVV----------------------------- 195
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
T+N +IA ++GD A+ FSRM ++ +W +MI+G+ Q + EA+
Sbjct: 196 ------TWNIMIAQLIKQGDHEGAYDLFSRMPER----NVRSWTSMIAGYVQCGKAKEAI 245
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
LF M +G+K N VTV VL A G++ +G IH R G +V + LIDMY
Sbjct: 246 HLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMY 305
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
KCG L++A +FE + V SW+AMIG HG + ++ LF M + G+ N VT I
Sbjct: 306 VKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFI 365
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
+L ACSH GL+ +G F SM YG+ EHY C+VD+L R+G + EA++ + +PM
Sbjct: 366 GLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPM 425
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENL 509
+ GA C +H ++A + E+ +V+LSNI A G W + +
Sbjct: 426 KPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARV 485
Query: 510 RKIMKEKNVQKQPGFSRV 527
RK MK++ V+K PG+S +
Sbjct: 486 RKFMKDRQVKKTPGWSSI 503
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 174/557 (31%), Positives = 278/557 (49%), Gaps = 44/557 (7%)
Query: 9 NNLSVNYLDC--LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSA 66
N L + C LL + S+AL ++ L ++ S + L G Y G V+ A
Sbjct: 44 NGLIAHVYQCNILLQAYINSQALSDAHKL--LHFMPQPSVVSYNTILSG-YFKFGLVSEA 100
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
+FD + N ++ E + +F MR R + FT++I++ C
Sbjct: 101 IKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCC--- 157
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
D+ G+QVHA ++ + D +G L+ MY++ G + AR+VF GM R +V+W +MI
Sbjct: 158 -DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMI 216
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF- 245
S Y + D+++ LF ++ EG+ +++TY ++ +A R A S + GF
Sbjct: 217 SCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFC 276
Query: 246 ----------------------------VPD--LVTWNAMISGFAQSKRENEALKLFKGM 275
+PD +V+W +I GF QS EA+ LF M
Sbjct: 277 SDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQM 336
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL-HIDVFTGSALIDMYSKCGS 334
+ I+PN+ T G+L A + Q GR H LV + GL DV GSA++DMYSKCG
Sbjct: 337 QLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGE 396
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML---EEGMRANEVTLISV 391
+ DA F+ +++ASWN +I Y ++G +++L+ M+ G+ NEVT + V
Sbjct: 397 MGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGV 456
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
L ACSH GL+++G F+ M +++ +K + EHY C+VD+L R+G + EA L+ +P+
Sbjct: 457 LCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKP 516
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRK 511
N M GA C +HG + E + R +V+L+N GEW EA +R+
Sbjct: 517 DNVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLANSYTDIGEWGEAVEIRE 576
Query: 512 IMKEKNVQKQPGFSRVE 528
+M+ + V+K G S VE
Sbjct: 577 VMEARGVEKTAGCSWVE 593
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 191/464 (41%), Gaps = 87/464 (18%)
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
K +HA + G V N L+ Y L A ++ H M + VVS+ +++SGY
Sbjct: 33 KAPVLHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYF 92
Query: 191 NVSKVDEAVVLFE-------------------------------RMKLEGLEPNQFTYNA 219
V EA+ LF+ +M+ + P+ FTY
Sbjct: 93 KFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAI 152
Query: 220 IIAS-------------------------------YARRGDSNAAFAFFSRMTAEGFVPD 248
II YA G+ A F M + G
Sbjct: 153 IIPCCDLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRG---- 208
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
LVTWNAMIS +++ R ++++ LF+ + GI + T VL + ++H+
Sbjct: 209 LVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHS 268
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
L+ G D FT +AL+++YSKCG + A LFE ++V SW +I + + G ++
Sbjct: 269 LIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEE 328
Query: 369 SIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY-ACV 427
++ LF +M + N T +L AC+ +KG F + ++G+ + + V
Sbjct: 329 AMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRH-FHGLVLKFGLLGADVVVGSAV 387
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNS----MAGAFRNGCNIHGRRDLAVTMGEEFFEMG 483
VDM + G M +A +++P S + G +NG G + L + + EM
Sbjct: 388 VDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGA---GMKALKL-----YNEMV 439
Query: 484 LRKPDG-------FVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
L P G FV + C+ +G E + K M +K++ K
Sbjct: 440 LLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIK 483
>gi|357148182|ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 553
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/488 (32%), Positives = 255/488 (52%), Gaps = 16/488 (3%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
++ S + L ++ D+ +AR +FD +P+ NV N +V G+ A YF+
Sbjct: 37 DVVSWNALLTALWRAGRDLPAARRLFDDMPSRNVISWNSVVAGCLAHGDLDAASAYFARA 96
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
R N +++ +L GL+ + + A+ +M N VS ++D ++ G +
Sbjct: 97 P----RRNVASWNAML---AGLVRLGRMDDAWALFGEMPQRNVVSY-TTMVDGLARRGEV 148
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
AR VF M ER++VSW +MI+GY + DEA LFE M + N A+I Y
Sbjct: 149 ARAREVFDAMPERNLVSWAAMITGYVENAMFDEARKLFEAMP----DKNVVACTAMITGY 204
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+ GD +A F + V D+++WNAMI+G+ + EA+KL M G+KP++
Sbjct: 205 CKDGDVESARRLFDGIP----VKDVISWNAMITGYVHNGHGEEAMKLHIIMFREGVKPDH 260
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
T+ +L A ++ GR HA+ + L +AL+ MYSKCG++ ++ +F
Sbjct: 261 ATLIAILTACSALALLRQGRSTHAVATKTMLESSTSFCNALMTMYSKCGNVGESELVFMN 320
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+I+++ SWN +I Y +HG +I LF M G+ N++T++S+LSAC H G V
Sbjct: 321 LKIQDIVSWNTIIAAYAQHGKYQKAIALFHEMETRGLIPNDITILSMLSACGHVGRVNDS 380
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
LE+F M +Y + S EHYACVVD+L R+G++ +A ++++P ++ GA
Sbjct: 381 LELFDLMSSKYAISPSAEHYACVVDILGRAGQLEKACSYIKKMPFEAERNVWGALLGASK 440
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
HG L + + +VMLSNI AA G W E +R MKEK V+KQPG+
Sbjct: 441 THGNVQLGELAAKMLVQSDSVSSGPYVMLSNIYAAAGMWGEVNRVRGQMKEKGVKKQPGY 500
Query: 525 SRVEKRNE 532
S E N+
Sbjct: 501 SWTEIANK 508
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 134/281 (47%), Gaps = 40/281 (14%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK-VDEAVVLFERMKLEGL 210
N I ++ G + +ARRVF M RDVVSW ++++ + + A LF+ M
Sbjct: 11 NQRITALARAGDVAAARRVFDAMPRRDVVSWNALLTALWRAGRDLPAARRLFDDMP---- 66
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
N ++N+++A GD +AA A+F+R ++ +WNAM++G + R ++A
Sbjct: 67 SRNVISWNSVVAGCLAHGDLDAASAYFARAPRR----NVASWNAMLAGLVRLGRMDDAWA 122
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL--------------- 315
LF M + N V+ T ++ G + RE+ + L
Sbjct: 123 LFGEM----PQRNVVSYTTMVDGLARRGEVARAREVFDAMPERNLVSWAAMITGYVENAM 178
Query: 316 ------------HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
+V +A+I Y K G ++ AR LF+ +K+V SWNAMI Y +
Sbjct: 179 FDEARKLFEAMPDKNVVACTAMITGYCKDGDVESARRLFDGIPVKDVISWNAMITGYVHN 238
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
G + +++L M EG++ + TLI++L+ACS L+ +G
Sbjct: 239 GHGEEAMKLHIIMFREGVKPDHATLIAILTACSALALLRQG 279
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C LRQG+ HA+ L + S + L+ +Y+ CG+V + LVF +
Sbjct: 263 LIAILTACSALALLRQGRSTHAVATKTMLESSTSFCNALMTMYSKCGNVGESELVFMNLK 322
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
++ N ++ A A G +Q+AI F M N T +L AC
Sbjct: 323 IQDIVSWNTIIAAYAQHGKYQKAIALFHEMETRGLIPNDITILSMLSAC 371
>gi|224066751|ref|XP_002302197.1| predicted protein [Populus trichocarpa]
gi|222843923|gb|EEE81470.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 164/482 (34%), Positives = 254/482 (52%), Gaps = 54/482 (11%)
Query: 56 VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFT 115
+YA CGD+ +R +F+ +P NV N M+ G+ + A F
Sbjct: 1 MYAKCGDIPDSRKLFEYMPERNVVTWNAMISGYGKNGDMKSASVLFD------------- 47
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM- 174
+M N VS +ID +++ G + +ARR F+ +
Sbjct: 48 -------------------------KMSTRNAVS-WIEMIDGFARSGDMVAARRTFNEVP 81
Query: 175 FE-RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA 233
FE ++VV+WT MI GY + +++ A +LFE M + N F ++++I+ Y + G+ A
Sbjct: 82 FELKNVVTWTVMIDGYASKGEMEAARLLFEDMP----QRNFFVWSSMISGYCKIGNVKEA 137
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
A F R+ V +LV WN++I G++Q+ EAL F M G +P+ VTV GVL A
Sbjct: 138 RAIFDRVP----VRNLVNWNSLICGYSQNGFCEEALDAFGKMQNEGYEPDEVTVVGVLSA 193
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
+ +G+++H ++C G+ ++ F +AL+DMY+KCG L AR +FE KN A W
Sbjct: 194 CAQLSLLDVGKDVHKMICAKGMKLNEFVVNALVDMYAKCGDLTGARLIFERMTNKNNACW 253
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
N+MI + HG ++E F RM E + +E+T +SVLSAC HGG VE GLEIF M E
Sbjct: 254 NSMISGFAVHGKTKEALEFFGRMEESNEKPDEITFLSVLSACVHGGFVEVGLEIFSKM-E 312
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAV 473
RYG+ S +HY C+VD+L R+GR+ +AY L++ +PM +++ GAF C IH D+
Sbjct: 313 RYGLSASIKHYGCLVDLLGRAGRIQDAYHLIKSMPMKPNDTVWGAFLGACRIHMDNDMVE 372
Query: 474 TMGEEFFEMGLRKPDG----FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEK 529
+ E+ G + +L NI A G W +A + +M ++ +QK G S +
Sbjct: 373 QVVEDVCTSDSSVDSGNDPHYALLLNIYAGSGSWEKAGRVSMVMADRGLQKTSGRSSLML 432
Query: 530 RN 531
N
Sbjct: 433 EN 434
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 47 FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE 106
F + S ++ Y G+V AR +FD++P N+ N ++ + G +EA+ F M+
Sbjct: 118 FFVWSSMISGYCKIGNVKEARAIFDRVPVRNLVNWNSLICGYSQNGFCEEALDAFGKMQN 177
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
Y ++ T VL AC L + GK VH + G + + V NAL+DMY+KCG L
Sbjct: 178 EGYEPDEVTVVGVLSACAQLSLLDVGKDVHKMICAKGMKLNEFVVNALVDMYAKCGDLTG 237
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
AR +F M ++ W SMISG+ K EA+ F RM+ +P++ T+ +++++
Sbjct: 238 ARLIFERMTNKNNACWNSMISGFAVHGKTKEALEFFGRMEESNEKPDEITFLSVLSACVH 297
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G FS+M G + + ++ ++ R +A L K M +KPN+
Sbjct: 298 GGFVEVGLEIFSKMERYGLSASIKHYGCLVDLLGRAGRIQDAYHLIKSM---PMKPNDTV 354
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG---SALIDMYSKCGSLKDA 338
L A + + ++ VC +D + L+++Y+ GS + A
Sbjct: 355 WGAFLGACRIHMDNDMVEQVVEDVCTSDSSVDSGNDPHYALLLNIYAGSGSWEKA 409
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + L GK VH ++C LN F + + LV +YA CGD+ ARL+F+++ N
Sbjct: 190 VLSACAQLSLLDVGKDVHKMICAKGMKLNEFVVNA-LVDMYAKCGDLTGARLIFERMTNK 248
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N N M+ A G +EA+ +F M E + ++ TF VL ACV ++ G ++
Sbjct: 249 NNACWNSMISGFAVHGKTKEALEFFGRMEESNEKPDEITFLSVLSACVHGGFVEVGLEIF 308
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
+ + G + L+D+ + G + A + M
Sbjct: 309 SKMERYGLSASIKHYGCLVDLLGRAGRIQDAYHLIKSM 346
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 259/541 (47%), Gaps = 69/541 (12%)
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
+AR +FD +P P + ++ A + + QE + FS + +V+K+C
Sbjct: 37 AARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCA 96
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMY-------------------------- 158
L ++GKQVH A G D+ V AL+D Y
Sbjct: 97 ILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNC 156
Query: 159 -----SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN 213
SK G + ARR+F GM R SW SMI+ Y + + EA+ LF RM EG PN
Sbjct: 157 LITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPN 216
Query: 214 QFTYNAIIASYARRGD----------------------------------SNAAFAFFSR 239
T + + A+ GD + A F R
Sbjct: 217 AITIATMFSICAKTGDLETGKWARSLIAEQDLQNMIVHTALMEMYVKCQAIDEARREFDR 276
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
M D+V W+ MI+G+AQ+ R +E+L+LF+ M + KPN VT+ GVL A GS
Sbjct: 277 MQQR----DVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGS 332
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
++G +I + V L + + GSALIDMY+KCG + AR++F K V +WN+M+
Sbjct: 333 DELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRG 392
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
+G +I L++ M EE ++ NE+T +++L+AC+H GLV++G+ F+ MK + V
Sbjct: 393 LALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSP 452
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEF 479
EH AC+VD+LC+SGR+ EAY + + + + + C H +LA +
Sbjct: 453 QVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKL 512
Query: 480 FEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQ 539
+ +V+LSNI A G W + +R +M+ KNVQK +S +E E + VQ
Sbjct: 513 LVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQ 572
Query: 540 N 540
+
Sbjct: 573 D 573
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 159/358 (44%), Gaps = 54/358 (15%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
L+ Y+ GDV AR +FD + N M+ A G +QEA+ F M R N
Sbjct: 157 LITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPN 216
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
T + + C D++ GK ++ + +N + V AL++MY KC + ARR F
Sbjct: 217 AITIATMFSICAKTGDLETGKWARSLIAEQDLQNMI-VHTALMEMYVKCQAIDEARREFD 275
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------- 217
M +RDVV+W++MI+GY + E++ LFERMK +PN+ T
Sbjct: 276 RMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDEL 335
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
+A+I Y + G A + F+RM + ++TWN+M+
Sbjct: 336 GGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKV----VITWNSMMR 391
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-------REIHALV 310
G A + +A+ L+K M ++PN +T +L A G + G + IH +
Sbjct: 392 GLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVS 451
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDA-RTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+ V + ++D+ K G L++A + + ++ N W+ ++ H V+
Sbjct: 452 PQ------VEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVE 503
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 154/337 (45%), Gaps = 11/337 (3%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
C K+ L GK +L+ DL + + L+ +Y C ++ AR FD++ +V +
Sbjct: 227 CAKTGDLETGKWARSLIAEQDLQNMIVHTALMEMYVKCQAIDEARREFDRMQQRDVVAWS 286
Query: 83 WMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
M+ A G E++ F M+ + N+ T VL AC L + G Q+ +
Sbjct: 287 TMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQ 346
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
+G+ALIDMY+KCG + AR VF+ M + V++W SM+ G +A+ L+
Sbjct: 347 NLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLY 406
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM-TAEGFVPDLVTWNAMISGFAQ 261
+ M E ++PN+ T+ A++ + G + +FF M T P + ++ +
Sbjct: 407 KEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCK 466
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
S R EA K M ++PN V + +L A +++ + L L ++
Sbjct: 467 SGRLREAYKFICDM---EVEPNAVIWSTLLSACRAHADVELAK----LAASKLLVLEPDN 519
Query: 322 GSA---LIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
S L ++Y+ G D R + ++ R KNV +A
Sbjct: 520 SSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSA 556
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 124/314 (39%), Gaps = 45/314 (14%)
Query: 153 ALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEP 212
L D+ S +AR +F + ++IS + E + F + G +
Sbjct: 24 PLHDLLSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDV 83
Query: 213 NQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLF 272
++ S A S G + D+ A++ +A++ + A+K+F
Sbjct: 84 PPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVF 143
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
M V P N +TG YSK
Sbjct: 144 DEMPVKDPIPMNCLITG---------------------------------------YSKS 164
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G + AR LF+ + ASWN+MI CY G ++ LF RML EG R N +T+ ++
Sbjct: 165 GDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMF 224
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPM 449
S C+ G +E G + RS+ ++ H A +++M + + EA +D ++Q +
Sbjct: 225 SICAKTGDLETG-KWARSLIAEQDLQNMIVHTA-LMEMYVKCQAIDEARREFDRMQQRDV 282
Query: 450 YVTNSM-AGAFRNG 462
++M AG +NG
Sbjct: 283 VAWSTMIAGYAQNG 296
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 238/417 (57%), Gaps = 27/417 (6%)
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
VL AC + GK VH +A + G D+ VGNAL+DMY+KCG++ A +VF + E+D
Sbjct: 19 VLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRIKEKD 78
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
VVSW +M++GY + + ++A+ LFE+M+ E +E N +++A+IA++A+RG F
Sbjct: 79 VVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETLDVFR 138
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG--IKPNNVTVTGVLQAGGL 296
M Q N+AL+LF M +KPN T++ L A
Sbjct: 139 EM--------------------QHGEANDALELFSWMFKQDGLVKPNCFTISCALIACAR 178
Query: 297 TGSIQIGREIHALVCRMGLHID---VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
++++GR+IHA + R H D ++ + LIDMY+K G + AR +F+ + KN SW
Sbjct: 179 LAALRLGRQIHAYILRN--HFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSW 236
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
+++ YG HG ++E+F+ M G++ + VTL+ VL ACSH G++++G+E F SM +
Sbjct: 237 TSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSK 296
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAV 473
+GV +EHYAC+VD+L R+GR+ EA +L+ + M ++ + A +GC IH +L
Sbjct: 297 EFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGE 356
Query: 474 TMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
++ E+ + +LSNI A W + +R +MK ++K+PG S V+ +
Sbjct: 357 HAAKQLLELNSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGK 413
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 155/342 (45%), Gaps = 58/342 (16%)
Query: 19 LLGKCMKSKALRQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C A GK VH + + + + LV +YA CG V+ A VFD+I +
Sbjct: 19 VLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRIKEKD 78
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMR-------------------------------- 105
V N MV + G F++A+G F MR
Sbjct: 79 VVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETLDVFR 138
Query: 106 --------------------EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
+ + + N FT S L AC L ++ G+Q+HA + F+
Sbjct: 139 EMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFD 198
Query: 146 ND-VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+ + V N LIDMY+K G + AR VF + +++ VSWTS+++GY + EA+ +F+
Sbjct: 199 SAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDE 258
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSK 263
M+ GL+P+ T ++ + + G + FF+ M+ E G +P + M+ ++
Sbjct: 259 MRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAG 318
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
R NEA++L +GM ++P+++ +L + ++++G
Sbjct: 319 RLNEAMELIEGM---QMEPSSIVWVALLSGCRIHANVELGEH 357
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 60/269 (22%)
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
++P+ V++ VL A G+ G+ +H + R G D+F G+AL+DMY+KCG + +A
Sbjct: 9 MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ + K+V SWNAM+ Y + G + ++ LFE+M EE + N V+ +V++A + G
Sbjct: 69 KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128
Query: 400 LVEKGLEIFRSMKE----------------------------------------RYGVKI 419
L + L++FR M+ R G +I
Sbjct: 129 LGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQI 188
Query: 420 S----KEHYA--------CVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCN 464
+ H+ C++DM +SG + A +D L+Q S+ G
Sbjct: 189 HAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLM----TGYG 244
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+HGR A+ + +E +GL +PDG +L
Sbjct: 245 MHGRGKEALEVFDEMRRVGL-QPDGVTLL 272
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
+ C L C + ALR G+Q+HA + N D + + L+ +YA GD++ AR VFD +
Sbjct: 169 ISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNL 228
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
N ++ G +EA+ F MR + + T +VL AC I +G
Sbjct: 229 KQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGI 288
Query: 134 Q-VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
+ ++++ + G ++D+ + G L A + GM E + W +++SG
Sbjct: 289 EFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSG--- 345
Query: 192 VSKVDEAVVLFERMKLEGLEPN-----QFTYNAIIASYARR 227
++ V L E + LE N +T + I + ARR
Sbjct: 346 -CRIHANVELGEHAAKQLLELNSENDGSYTLLSNIYANARR 385
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 242/488 (49%), Gaps = 63/488 (12%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N S S LVG+ + A +FD+IP P+ F N M+ GNF++A +F
Sbjct: 91 NTVSWNSLLVGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNGNFEKAQSFF--- 147
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
N+ F D + N +I Y++ G +
Sbjct: 148 -------NRMPF-----------------------------KDAASWNTMITGYARRGEM 171
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
AR +F+ M E++ VSW +MISGY +++A F+ G+ + A+I Y
Sbjct: 172 EKARVLFYSMMEKNEVSWNAMISGYIECGDLEKAAHFFKAAPFRGV----VAWTAMITGY 227
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
+ A A F MT + +LVTWNAMISG+ ++ R + LKLF+ ML GI+PN+
Sbjct: 228 MKAKKVELAEAMFKDMTVKK---NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNS 284
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
++ L ++ +GR+IH +V MY KCG L DA LFE
Sbjct: 285 SGLSSALLGCSELSALCLGRQIHQIV-----------------MYCKCGELGDAWKLFEA 327
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+ K+V +WNAMI Y +HG + ++ LF M + + + +T ++VL AC+H GLV+ G
Sbjct: 328 MKKKDVVAWNAMISGYAQHGNAEKALCLFHEMRDSKTKPDWITFVAVLLACNHAGLVDIG 387
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
+ F SM Y V+ +HY C+VD+L R+G++ EA L+R +P ++ G C
Sbjct: 388 MTYFDSMVRDYRVEPRPDHYTCMVDLLGRAGKVEEALKLIRSMPFRPHAAVFGTLLGACR 447
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
+H +LA E+ E+ R G+V L+NI A+ W + +RK MKE NV K PG+
Sbjct: 448 VHKNVELAEFAAEKLLELDPRNAAGYVQLANIYASKNLWEDVARVRKRMKESNVVKVPGY 507
Query: 525 SRVEKRNE 532
S +E RN+
Sbjct: 508 SWIEIRNK 515
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 171/368 (46%), Gaps = 48/368 (13%)
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC-NVSKVDEA 198
T+ E+ + N +I + G + A VFHGM ++ VSW S++ G + S++ EA
Sbjct: 53 TKPSDEDQIFPLNKIIATRVRSGDIDGALSVFHGMRAKNTVSWNSLLVGISKDPSRMMEA 112
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
LF+ + EP+ F+YN +++ Y R G+ A +FF+RM + D +WN MI+G
Sbjct: 113 HQLFDEIP----EPDTFSYNIMLSCYVRNGNFEKAQSFFNRMPFK----DAASWNTMITG 164
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
+A+ +A LF M+ N ++G ++ G L E A +
Sbjct: 165 YARRGEMEKARVLFYSMMEKNEVSWNAMISGYIECGDL--------EKAAHFFKAAPFRG 216
Query: 319 VFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
V +A+I Y K ++ A +F ++T KN+ +WNAMI Y ++ + ++LF ML
Sbjct: 217 VVAWTAMITGYMKAKKVELAEAMFKDMTVKKNLVTWNAMISGYVENSRPEDGLKLFRAML 276
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
EEG+R N L S L CS + G +I + + M C+ G +
Sbjct: 277 EEGIRPNSSGLSSALLGCSELSALCLGRQIHQ------------------IVMYCKCGEL 318
Query: 438 VEAYDL---LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM--GLRKPDGFVM 492
+A+ L +++ + N+M + HG + A+ + F EM KPD
Sbjct: 319 GDAWKLFEAMKKKDVVAWNAMISGYAQ----HGNAEKALCL---FHEMRDSKTKPDWITF 371
Query: 493 LSNICAAD 500
++ + A +
Sbjct: 372 VAVLLACN 379
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 170/574 (29%), Positives = 285/574 (49%), Gaps = 74/574 (12%)
Query: 31 QGKQVHALLCTNDLN---IFSLKSKLVGVYAGCGDVNSARLVFD-KIPNPNVFMLNWMVM 86
Q ++H+L+ T L+ IFS +KL+ YA D S+ VF P+ NV++ N ++
Sbjct: 31 QLHKLHSLIITLGLHHSVIFS--AKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIR 88
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
A G F EA+ +S + + + +TF V+ AC GLLD + K +H MGF +
Sbjct: 89 ALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGS 148
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGM-------------------------------- 174
D+ +GNALIDMY + L AR+VF M
Sbjct: 149 DLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSI 208
Query: 175 ---------FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
F+ D+++ TS++ ++ ++ + + M G E + N +I YA
Sbjct: 209 KLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYA 268
Query: 226 RRGDSNAAFAFFSRMTAEGFVP---------------------------DLVTWNAMISG 258
+ G+ A+ FS M + V D++TWN +I+
Sbjct: 269 KCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIAS 328
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
S+ N L++ M G+ P+ T+ +L L + + G+EIH + ++GL D
Sbjct: 329 CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD 388
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
V G+ LI+MYSKCGSL+++ +F++ + K+V +W A+I G +G ++ F M
Sbjct: 389 VPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEA 448
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
G+ + V ++++ ACSH GLVE+GL F MK+ Y ++ EHYACVVD+L RS +
Sbjct: 449 AGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLD 508
Query: 439 EAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+A D + +P+ +S+ GA + C + G ++A + E E+ +V++SNI A
Sbjct: 509 KAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYA 568
Query: 499 ADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
A G+W + ++RK +K + ++K PG S +E +N+
Sbjct: 569 ALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNK 602
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 10/236 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C A RQGK++H C L + S + + L+ +Y+ CG + ++ VF +
Sbjct: 360 ILPVCSLLAAKRQGKEIHG--CIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKT 417
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQ 134
+V ++ A G ++A+ F M + F ++ AC +++G
Sbjct: 418 KDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNY 477
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVS 193
H + E + ++D+ S+ LL A M + D W +++S C +S
Sbjct: 478 FHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSA-CRMS 536
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIAS-YARRGDSNAAFAFFSRMTAEGFVPD 248
E +E L P+ Y ++++ YA G + + + A G D
Sbjct: 537 GDTEIAERVSERIIE-LNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKD 591
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 174/553 (31%), Positives = 281/553 (50%), Gaps = 47/553 (8%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ C K +AL +G+++H L+ T L++ L+ +YA CG ++ A+ VF+ + +
Sbjct: 16 LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 75
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+F + ++ A A G + A+ + M N TF+ L C + + G+ +H
Sbjct: 76 LFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQ 135
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
D + ++L++MY KC + AR+VF GM R+V S+T+MIS Y + E
Sbjct: 136 RILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAE 195
Query: 198 AVVLFERM-KLEGLEPNQFTY-----------------------------------NAII 221
A+ LF RM K+E +EPN +T+ NA++
Sbjct: 196 ALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALV 255
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y + G A F MTA ++++W +MI+ +AQ EAL LFK M ++
Sbjct: 256 TMYGKCGSPVEARKVFDSMTAR----NVISWTSMIAAYAQHGNPQEALNLFKRM---DVE 308
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ V+ + L A L G++ GREIH V L S L+ MY++CGSL DAR +
Sbjct: 309 PSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQMETS-LLSMYARCGSLDDARRV 367
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F + ++ S NAMI + +HG ++ ++ RM +EG+ A+ +T +SVL ACSH LV
Sbjct: 368 FNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLV 427
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG-AFR 460
+ F+S+ +GV EHY C+VD+L RSGR+ +A +L+ +P Y T+++A
Sbjct: 428 ADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMP-YQTDAVAWMTLL 486
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+GC HG + + FE+ + +V LSN+ AA + +A +RK M+E+ V
Sbjct: 487 SGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTT 546
Query: 521 QPGFSRVEKRNEF 533
S +E NE
Sbjct: 547 PVAVSYIEIDNEL 559
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 204/422 (48%), Gaps = 45/422 (10%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+KF + ++ AC L +++G+++H GF D+ + AL+ MY+KCG L A+RVF
Sbjct: 9 DKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVF 68
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
GM +D+ +W+S+IS Y + + AVVL+ RM EG+EPN T+ + A
Sbjct: 69 EGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLA 128
Query: 232 AAFAFFSRMTAEGFVPDLV-------------------------------TWNAMISGFA 260
A R+ A D V ++ AMIS +
Sbjct: 129 DGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYV 188
Query: 261 QSKRENEALKLFKGM-LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
Q+ EAL+LF M V I+PN T +L A G+++ GR++H + G +V
Sbjct: 189 QAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNV 248
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+AL+ MY KCGS +AR +F+ +NV SW +MI Y +HG ++ LF+RM
Sbjct: 249 VVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM--- 305
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
+ + V+ S L+AC+ G +++G EI + E + S + ++ M R G + +
Sbjct: 306 DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAH--LASPQMETSLLSMYARCGSLDD 363
Query: 440 A---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI 496
A ++ ++ + N+M AF HGR+ A+ + + G+ DG +S +
Sbjct: 364 ARRVFNRMKTRDAFSCNAMIAAFTQ----HGRKKQALRIYRRMEQEGI-PADGITFVSVL 418
Query: 497 CA 498
A
Sbjct: 419 VA 420
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 176/382 (46%), Gaps = 39/382 (10%)
Query: 18 CLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C LG C L G+ +H +L + L+ L+ +Y C ++ AR VF+ +
Sbjct: 116 CALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKAR 175
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREF-IYRCNKFTFSIVLKACVGLLDIKKGKQV 135
NV M+ A G EA+ FS M + N +TF+ +L A GL +++KG++V
Sbjct: 176 NVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKV 235
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H GF+ +V V NAL+ MY KCG AR+VF M R+V+SWTSMI+ Y
Sbjct: 236 HRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNP 295
Query: 196 DEAVVLFERMKL---------------------EGLEPNQFTYNAIIAS----------Y 224
EA+ LF+RM + EG E + A +AS Y
Sbjct: 296 QEALNLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQMETSLLSMY 355
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
AR G + A F+RM D + NAMI+ F Q R+ +AL++++ M GI +
Sbjct: 356 ARCGSLDDARRVFNRMKTR----DAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADG 411
Query: 285 VTVTGVLQAGGLTGSIQIGRE-IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+T VL A T + R+ +LV G+ V ++D+ + G L DA L E
Sbjct: 412 ITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVE 471
Query: 344 ITRIKNVA-SWNAMIGCYGKHG 364
+ A +W ++ +HG
Sbjct: 472 TMPYQTDAVAWMTLLSGCKRHG 493
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%)
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
GI + VT ++ A +++ GR +H + G D+ +AL+ MY+KCGSL DA
Sbjct: 5 GIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDA 64
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
+ +FE IK++ +W+++I Y + G + ++ L+ RM+ EG+ N VT L C+
Sbjct: 65 KRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCA 122
>gi|356546772|ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Glycine max]
Length = 713
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 156/475 (32%), Positives = 268/475 (56%), Gaps = 13/475 (2%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYF-SLMREFIYRCNKFTFS 117
G V +AR +FD++P+ NV ++W M + G FQE F + RE + N T +
Sbjct: 213 GRVAAARDLFDRMPDRNV--VSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMT 270
Query: 118 IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER 177
I+ KAC + +G Q+H + +++GFE D + N++I MYS G A +VF + ++
Sbjct: 271 IMFKACGNCGRMSEGMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDK 330
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
D+V+W S+ISGY + ++V+ A +F RM ++ + ++ A+IA +++ G A F
Sbjct: 331 DIVTWNSLISGYIHNNEVEAAYRVFGRMPVKDV----ISWTAMIAGFSKSGRVENAIELF 386
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+ + A+ D W A+ISGF + EAL + M+ G KPN +T++ VL A
Sbjct: 387 NMLPAK----DDFVWTAIISGFVNNNEYEEALHWYARMIWEGCKPNPLTISSVLAASAAL 442
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
++ G +IH + +M L ++ ++LI YSK G++ DA +F NV S+N++I
Sbjct: 443 VALNEGLQIHTCILKMNLEYNLSIQNSLISFYSKSGNVVDAYRIFLDVIEPNVISYNSII 502
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
+ ++G D ++ ++++M EG N VT ++VLSAC+H GLV++G IF +MK YG+
Sbjct: 503 SGFAQNGFGDEALGIYKKMQSEGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGI 562
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
+ +HYAC+VD+L R+G + EA DL+R +P + + GA H R DLA +
Sbjct: 563 EPEADHYACMVDILGRAGLLDEAIDLIRSMPFKPHSGVWGAILGASKTHLRLDLAKLAAQ 622
Query: 478 EFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
++ + +V+LSN+ +A G+ + + ++ K ++K PG S + +N+
Sbjct: 623 RITDLEPKNATPYVVLSNMYSAAGKKIDGDLVKMAKNLKGIKKSPGCSWITMKNK 677
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 166/366 (45%), Gaps = 51/366 (13%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTG-NFQEAIGYFSLMREFIY 109
+ ++ +A G + +AR +FD++P N M+ A G N +A FS++ E
Sbjct: 76 TAMLTAFAQNGQIQNARRLFDEMPQRTTVSNNAMISAYIRNGCNVGKAYELFSVLAER-- 133
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE-NDVSVGNALIDMYSKCGLLCSAR 168
N +++ ++ +G + K + + +E D + NALI+ Y K G + A
Sbjct: 134 --NLVSYAAMI---MGFVKAGKFHMAEKLYRETPYEFRDPACSNALINGYLKMGEVNEAL 188
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
R+F M ERDVVSW++M+ G C +V A LF+RM + N +++A+I Y G
Sbjct: 189 RIFENMGERDVVSWSAMVDGLCRDGRVAAARDLFDRMP----DRNVVSWSAMIDGYMGEG 244
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
F F M EG V + N+ T+T
Sbjct: 245 FFQEGFCLFMDMKREGLV----------------------------------EVNSTTMT 270
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
+ +A G G + G +IH LV R+G D +++I MYS G A +F K
Sbjct: 271 IMFKACGNCGRMSEGMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDK 330
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
++ +WN++I Y + V+++ +F RM + + ++ ++++ S G VE +E+F
Sbjct: 331 DIVTWNSLISGYIHNNEVEAAYRVFGRMPVKDV----ISWTAMIAGFSKSGRVENAIELF 386
Query: 409 RSMKER 414
+ +
Sbjct: 387 NMLPAK 392
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 124/260 (47%), Gaps = 20/260 (7%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N I + G + A +FH M ++ SWT+M++ + ++ A LF+ M
Sbjct: 45 NTQIAENGRNGNVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMPQRTTV 104
Query: 212 PNQFTYNAIIASYARRG-DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
N NA+I++Y R G + A+ FS + +LV++ AMI GF ++ + + A K
Sbjct: 105 SN----NAMISAYIRNGCNVGKAYELFSVLAER----NLVSYAAMIMGFVKAGKFHMAEK 156
Query: 271 LFKGMLVSGIKP--NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L++ P +N + G L+ G + +++I MG DV + SA++D
Sbjct: 157 LYRETPYEFRDPACSNALINGYLKMGEVNEALRIFE-------NMGER-DVVSWSAMVDG 208
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM-RANEVT 387
+ G + AR LF+ +NV SW+AMI Y G LF M EG+ N T
Sbjct: 209 LCRDGRVAAARDLFDRMPDRNVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTT 268
Query: 388 LISVLSACSHGGLVEKGLEI 407
+ + AC + G + +G++I
Sbjct: 269 MTIMFKACGNCGRMSEGMQI 288
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 5/196 (2%)
Query: 31 QGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
+G Q+H + +L S+++ L+ Y+ G+V A +F + PNV N ++ A
Sbjct: 447 EGLQIHTCILKMNLEYNLSIQNSLISFYSKSGNVVDAYRIFLDVIEPNVISYNSIISGFA 506
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV-HAVATQMGFENDV 148
G EA+G + M+ + N TF VL AC + +G + + + + G E +
Sbjct: 507 QNGFGDEALGIYKKMQSEGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEA 566
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
++D+ + GLL A + M F+ W +++ ++D A + +R +
Sbjct: 567 DHYACMVDILGRAGLLDEAIDLIRSMPFKPHSGVWGAILGASKTHLRLDLAKLAAQR--I 624
Query: 208 EGLEPNQFTYNAIIAS 223
LEP T ++++
Sbjct: 625 TDLEPKNATPYVVLSN 640
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 51/232 (21%)
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
N IA R G+ A + F +M + + +W AM++ FAQ+ + A +LF M
Sbjct: 45 NTQIAENGRNGNVKEAESIFHKMP----IKNTASWTAMLTAFAQNGQIQNARRLFDEM-- 98
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCG-SLK 336
P TV + +A+I Y + G ++
Sbjct: 99 ----PQRTTV---------------------------------SNNAMISAYIRNGCNVG 121
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
A LF + +N+ S+ AMI + K G + +L+ E + ++++
Sbjct: 122 KAYELFSVLAERNLVSYAAMIMGFVKAGKFHMAEKLYRETPYE--FRDPACSNALINGYL 179
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
G V + L IF +M ER V ++ +VD LCR GR+ A DL ++P
Sbjct: 180 KMGEVNEALRIFENMGERDVVS-----WSAMVDGLCRDGRVAAARDLFDRMP 226
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 259/541 (47%), Gaps = 69/541 (12%)
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
+AR +FD +P P + ++ A + + QE + FS + +V+K+C
Sbjct: 37 AARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCA 96
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMY-------------------------- 158
L ++GKQVH A G D+ V AL+D Y
Sbjct: 97 ILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNC 156
Query: 159 -----SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN 213
SK G + ARR+F GM R SW SMI+ Y + + EA+ LF RM EG PN
Sbjct: 157 LITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPN 216
Query: 214 QFTYNAIIASYARRGD----------------------------------SNAAFAFFSR 239
T + + A+ GD + A F R
Sbjct: 217 AITIATMFSICAKTGDLETGKWARSLIAEQDLQNMIVHTALMEMYVKCRAIDEARREFDR 276
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
M D+V W+ MI+G+AQ+ R +E+L+LF+ M + KPN VT+ GVL A GS
Sbjct: 277 MQQR----DVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGS 332
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
++G +I + V L + + GSALIDMY+KCG + AR++F K V +WN+M+
Sbjct: 333 DELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRG 392
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
+G +I L++ M EE ++ NE+T +++L+AC+H GLV++G+ F+ MK + V
Sbjct: 393 LALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSP 452
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEF 479
EH AC+VD+LC+SGR+ EAY + + + + + C H +LA +
Sbjct: 453 QVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKL 512
Query: 480 FEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQ 539
+ +V+LSNI A G W + +R +M+ KNVQK +S +E E + VQ
Sbjct: 513 LVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQ 572
Query: 540 N 540
+
Sbjct: 573 D 573
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 159/358 (44%), Gaps = 54/358 (15%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
L+ Y+ GDV AR +FD + N M+ A G +QEA+ F M R N
Sbjct: 157 LITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPN 216
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
T + + C D++ GK ++ + +N + V AL++MY KC + ARR F
Sbjct: 217 AITIATMFSICAKTGDLETGKWARSLIAEQDLQNMI-VHTALMEMYVKCRAIDEARREFD 275
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------- 217
M +RDVV+W++MI+GY + E++ LFERMK +PN+ T
Sbjct: 276 RMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDEL 335
Query: 218 --------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
+A+I Y + G A + F+RM + ++TWN+M+
Sbjct: 336 GGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKV----VITWNSMMR 391
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-------REIHALV 310
G A + +A+ L+K M ++PN +T +L A G + G + IH +
Sbjct: 392 GLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVS 451
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDA-RTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+ V + ++D+ K G L++A + + ++ N W+ ++ H V+
Sbjct: 452 PQ------VEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVE 503
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 154/337 (45%), Gaps = 11/337 (3%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
C K+ L GK +L+ DL + + L+ +Y C ++ AR FD++ +V +
Sbjct: 227 CAKTGDLETGKWARSLIAEQDLQNMIVHTALMEMYVKCRAIDEARREFDRMQQRDVVAWS 286
Query: 83 WMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
M+ A G E++ F M+ + N+ T VL AC L + G Q+ +
Sbjct: 287 TMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQ 346
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
+G+ALIDMY+KCG + AR VF+ M + V++W SM+ G +A+ L+
Sbjct: 347 NLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLY 406
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM-TAEGFVPDLVTWNAMISGFAQ 261
+ M E ++PN+ T+ A++ + G + +FF M T P + ++ +
Sbjct: 407 KEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCK 466
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
S R EA K M ++PN V + +L A +++ + L L ++
Sbjct: 467 SGRLREAYKFICDM---EVEPNAVIWSTLLSACRAHADVELAK----LAASKLLVLEPDN 519
Query: 322 GSA---LIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
S L ++Y+ G D R + ++ R KNV +A
Sbjct: 520 SSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSA 556
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 94/252 (37%), Gaps = 39/252 (15%)
Query: 153 ALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEP 212
L D+ S +AR +F + ++IS + E + F + G +
Sbjct: 24 PLHDLLSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDV 83
Query: 213 NQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLF 272
++ S A S G + D+ A++ +A++ + A+K+F
Sbjct: 84 PPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVF 143
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
M V P N +TG YSK
Sbjct: 144 DEMPVKDPIPMNCLITG---------------------------------------YSKS 164
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G + AR LF+ + ASWN+MI CY G ++ LF RML EG R N +T+ ++
Sbjct: 165 GDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMF 224
Query: 393 SACSHGGLVEKG 404
S C+ G +E G
Sbjct: 225 SICAKTGDLETG 236
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 169/550 (30%), Positives = 294/550 (53%), Gaps = 51/550 (9%)
Query: 19 LLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + G Q+H+ L C D +F + + L+ +Y+ C + AR VFD++ N
Sbjct: 182 VLAFCSDHEGFIFGFQLHSRILKCGLDCEVF-VGNALITMYSRCCRLVEARRVFDEMRNK 240
Query: 77 NVFMLNWMVMASAFTGNFQ-EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
++ N M+ A GN EAI F M + + + +F+ + AC + + G+Q+
Sbjct: 241 DLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQI 300
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H++A ++G++ V V N LI YSKC + A+ VF + +R+VVSWT+MIS +S+
Sbjct: 301 HSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS----ISEE 356
Query: 196 DEAVVLFERMKLEGLEPNQFTY-----------------------------------NAI 220
D A LF M+ +G+ PN T+ N++
Sbjct: 357 D-ATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSL 415
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I YA+ + + F + ++++WN++ISG+AQ+ EAL+ F L+
Sbjct: 416 ITMYAKFESMSDSMKVFEELNYR----EIISWNSLISGYAQNGLWQEALQTFLSALMES- 470
Query: 281 KPNNVTVTGVLQ--AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+PN T VL A S++ G+ H+ + ++GL+ + SAL+DMY+K GS+ ++
Sbjct: 471 RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICES 530
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+F T +KN +W A+I + +HG ++ + LF+ M EG++ + +T ++V++AC
Sbjct: 531 LGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRK 590
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
G+V+ G ++F SM + + ++ S EHY+ +VDML R+GR+ EA + + Q+P S+ +
Sbjct: 591 GMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQS 650
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C IHG D+A + ++ EM +V++SN+ A GEW + +RK M+E+ V
Sbjct: 651 LLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGMRERGV 710
Query: 519 QKQPGFSRVE 528
+K+ GFS V+
Sbjct: 711 RKEIGFSWVD 720
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 179/370 (48%), Gaps = 46/370 (12%)
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQ-EAIGYF--SLMREFIYRCNKFTFSIVLKACVGL 126
D+ P + LN M +A N EA+ F L F+ ++ T +IVLKAC G
Sbjct: 35 LDQSPQTTIASLN-RSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCG- 92
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
D K G Q+HA A GF + V+V N+L++MY K GL A VF + D+VSW +++
Sbjct: 93 -DSKLGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVL 151
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSR-----MT 241
SG+ + D+A+ RM G+ + T ++A + F SR +
Sbjct: 152 SGF---QRSDDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLD 208
Query: 242 AEGFV--------------------------PDLVTWNAMISGFAQSKREN-EALKLFKG 274
E FV DLV+WNAM+SG+AQ EA+ +F
Sbjct: 209 CEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLE 268
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
ML G+K ++V+ TG + A G ++GR+IH+L ++G V + LI YSKC
Sbjct: 269 MLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCED 328
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
++DA+ +FE +NV SW MI + + LF M +G+ N+VT + ++ A
Sbjct: 329 IEDAKLVFESIIDRNVVSWTTMISISE-----EDATSLFNEMRRDGVYPNDVTFVGLIHA 383
Query: 395 CSHGGLVEKG 404
+ LVE+G
Sbjct: 384 ITMKNLVEEG 393
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 235/506 (46%), Gaps = 55/506 (10%)
Query: 32 GKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
G Q+HA + + ++ ++ + L+ +Y G + A +VF+ + NP++ ++W + S F
Sbjct: 97 GCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDI--VSWNTVLSGF 154
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
+ +A+ + M + T + VL C G Q+H+ + G + +V V
Sbjct: 155 QRS-DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFV 213
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD-EAVVLFERMKLEG 209
GNALI MYS+C L ARRVF M +D+VSW +M+SGY EA+++F M EG
Sbjct: 214 GNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEG 273
Query: 210 LEPNQFTY-----------------------------------NAIIASYARRGDSNAAF 234
++ + ++ N +I++Y++ D A
Sbjct: 274 MKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAK 333
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F + ++V+W MI S E +A LF M G+ PN+VT G++ A
Sbjct: 334 LVFESIIDR----NVVSWTTMI-----SISEEDATSLFNEMRRDGVYPNDVTFVGLIHAI 384
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
+ ++ G+ IH + + ++ ++LI MY+K S+ D+ +FE + + SWN
Sbjct: 385 TMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWN 444
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE-KGLEIFRSMKE 413
++I Y ++G+ +++ F L E R NE T SVLS+ + + + + S
Sbjct: 445 SLISGYAQNGLWQEALQTFLSALMES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHIL 503
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA-GAFRNGCNIHGRRDLA 472
+ G+ + + ++DM + G + E+ + + P+ N +A A + HG +
Sbjct: 504 KLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPL--KNEVAWTAIISAHARHGDYEAV 561
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICA 498
+ + ++ G+ KPD L+ I A
Sbjct: 562 MNLFKDMEREGV-KPDSITFLAVITA 586
>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 579
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 168/533 (31%), Positives = 285/533 (53%), Gaps = 44/533 (8%)
Query: 34 QVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT 91
Q+HAL+ T L N + ++L+ Y ++ AR VF+K+P ++ N M++A + T
Sbjct: 3 QIHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRT 62
Query: 92 GNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
E + Y+ ++ E I + + TF++ LKAC L+D+ G+ + A G+ DV V
Sbjct: 63 NYPDEVLNLYYRMISEGI-KPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFV 121
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
++++++Y+K G + A+ VF M +RDVVSWT+MI+G+ + +A+ ++ M+ E
Sbjct: 122 VSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERT 181
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTA---------------------------- 242
E + +I + GDS + M
Sbjct: 182 EGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASR 241
Query: 243 --EGFVP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
EG +P +++W A+ISGFAQ+ N+ L M SG KP+ V++ L A G
Sbjct: 242 VFEG-IPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVG 300
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++++G+ +H + + L++D +G+ALIDMY+KCG+L AR LF+ +++ WNAMI
Sbjct: 301 NLKVGKSLHGHIVKR-LYLDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMIS 359
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
YG HG ++ LF +M E + + T S+LSACSH GLVE+G F + ++ ++
Sbjct: 360 SYGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQ 419
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEE 478
S++HYAC+VD+L R+G++ EAY L+ + + ++ A +GC H + + ++
Sbjct: 420 PSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKK 479
Query: 479 FFEMGLRKPDG---FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
E PD +V++SN + +W +A RKIMK ++K PG+S VE
Sbjct: 480 ILE---SNPDDLGIYVLVSNFFSMAKKWDDAAVFRKIMKNTGMRKVPGYSAVE 529
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 271/524 (51%), Gaps = 29/524 (5%)
Query: 27 KALRQGKQVHALLC-TNDLNIFSLKSKLVGVYA-GCGDVNSARLVFDKIPNPNVFMLNWM 84
K R KQ+HA+ T + ++++ A D++ AR VF ++P PN F N +
Sbjct: 30 KTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTI 89
Query: 85 VMASAFTGNFQ---EAIGYFSLMR-EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVAT 140
+ A T + EA+ FS M + + N+FTF VLKAC +++GKQ+H +
Sbjct: 90 LRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIV 149
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ GF D V + L+ MY C ++ A + +F ++VV + G C +
Sbjct: 150 KFGFHEDEFVISNLVRMYVMCAVMEDA----YSLFCKNVVDF----DGSCQME------- 194
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
++ K +G N +N +I R GD +A F M +V+WN MISG+A
Sbjct: 195 -LDKRKQDG---NVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRS----VVSWNVMISGYA 246
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q+ EA+ LF+ M S I PN VT+ VL A G++++G+ IH + + ID
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDV 306
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
GSAL+DMYSKCGS+ +A +FE +N +W+A+IG + HG + +I F M + G
Sbjct: 307 LGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAG 366
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ N+V I +LSACSH GLVE+G F M + G++ EHY C+VD+L R+G + EA
Sbjct: 367 VTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEA 426
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
+L+R +P+ + + A C +H + + E E+ +V LSN+ A+
Sbjct: 427 EELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASL 486
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNESKA 544
G W +R MK +++K PG S +E E V+++S +
Sbjct: 487 GNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHS 530
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 273/509 (53%), Gaps = 51/509 (10%)
Query: 57 YAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKF 114
YA G V+ AR VFD++P N ++W + SA+ N +EA F ++
Sbjct: 162 YAQNGCVDDARRVFDRMPEKND--VSWNALLSAYVQNSKLEEACVLFG---------SRE 210
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFEN----DVSVGNALIDMYSKCGLLCSARRV 170
+++V C+ +KK K V A + F++ DV N +I Y++ G + AR++
Sbjct: 211 NWALVSWNCLLGGFVKKKKIVEA---RQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQL 267
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM------------------------- 205
F DV +WT+M+SGY V+EA LF+RM
Sbjct: 268 FDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAK 327
Query: 206 KLEGLEP--NQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
+L + P N T+N +I YA+ G + A F +M D V+W AMI+G++QS
Sbjct: 328 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSG 383
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
EAL+LF M G + N + + L ++++G+++H + + G F G+
Sbjct: 384 HSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN 443
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
AL+ MY KCGS+++A LF+ K++ SWN MI Y +HG + ++ FE M EG++
Sbjct: 444 ALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKP 503
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
++ T+++VLSACSH GLV+KG + F +M + YGV+ + +HYAC+VD+L R+G + EA++L
Sbjct: 504 DDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNL 563
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
++ +P ++ G +HG +LA T ++ F M +V+LSN+ A+ G W
Sbjct: 564 MKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRW 623
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ LR M++K V+K PG+S +E +N+
Sbjct: 624 GDVGKLRVRMRDKGVKKVPGYSWIEIQNK 652
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 225/516 (43%), Gaps = 93/516 (18%)
Query: 31 QGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
Q Q L + D +I + Y G + A VF ++P + N M+
Sbjct: 44 QKSQTKPLPKSGDSDIKEWNVA-ISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLR 102
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
G F+ A F M E + ++++++K V ++ K +++ E DV
Sbjct: 103 NGEFELARMLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFERMP----ERDVCS 154
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM----- 205
N ++ Y++ G + ARRVF M E++ VSW +++S Y SK++EA VLF
Sbjct: 155 WNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWAL 214
Query: 206 ------------KLEGLEPNQF----------TYNAIIASYARRGDSNAAFAFFSRMTAE 243
K + +E QF ++N II YA+ G+ + A F E
Sbjct: 215 VSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFD----E 270
Query: 244 GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS-IQI 302
V D+ TW AM+SG+ Q++ EA +LF M + N V+ +L AG + G +++
Sbjct: 271 SPVHDVFTWTAMVSGYIQNRMVEEARELFDRM----PERNEVSWNAML-AGYVQGERVEM 325
Query: 303 GREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
+E+ + CR +V T + +I Y++CG + +A+ LF+ ++ SW AMI Y
Sbjct: 326 AKELFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 380
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLEIFRS 410
+ G ++ LF M EG R N + S LS C+ HG LV+ G E
Sbjct: 381 QSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET--- 437
Query: 411 MKERYGVKISKEHYACVVD-----MLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNG 462
C V M C+ G + EA DL +++ + N+M G
Sbjct: 438 --------------GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA----G 479
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+ HG + A+ E GL KPD M++ + A
Sbjct: 480 YSRHGFGEEALRFFESMKREGL-KPDDATMVAVLSA 514
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 134/260 (51%), Gaps = 5/260 (1%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N+ + + + G YA CG ++ A+ +FDK+P + M+ + +G+ EA+ F LM
Sbjct: 337 NVSTWNTMITG-YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLM 395
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
R N+ +FS L C ++ ++ GKQ+H + G+E VGNAL+ MY KCG +
Sbjct: 396 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 455
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
A +F M +D+VSW +MI+GY +EA+ FE MK EGL+P+ T A++++
Sbjct: 456 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSAC 515
Query: 225 ARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ G + +F MT + G P+ + M+ ++ EA L K M +P+
Sbjct: 516 SHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNM---PFEPD 572
Query: 284 NVTVTGVLQAGGLTGSIQIG 303
+L A + G+ ++
Sbjct: 573 AAIWGTLLGASRVHGNTELA 592
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 256/481 (53%), Gaps = 19/481 (3%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ +VG Y ++ A +F+++PN NV N M+ A G A+ F M E
Sbjct: 119 TAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPER--- 175
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
N +++ V+ I++ +++ E DV A+I SK G + AR +
Sbjct: 176 -NVVSWNTVMSMLAQCGRIEEARRLFDRMP----ERDVISWTAMIAGLSKNGRIDEARLL 230
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M ER+VVSW +MI+GY ++DEA+ LFERM L ++N +I + GD
Sbjct: 231 FDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLP----SWNTMITGLIQNGDL 286
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML-VSGIKPNNVTVTG 289
A F+ M + ++++W MI+G Q EALK+F ML +G KPN T
Sbjct: 287 RRARKLFNEMPKK----NVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVS 342
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE--ITRI 347
VL A + G+++H ++ + F SALI+MYSKCG L AR +F+ +T
Sbjct: 343 VLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQ 402
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
+++ SWN +I Y HG +I F+ M + G + ++VT + +LSACSH GLVE+GL+
Sbjct: 403 RDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKY 462
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
F + + + + ++HYAC+VD+ R+GR+ EA+ + ++ + + GA GCN+H
Sbjct: 463 FDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHA 522
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
+ ++ E+ +++LSNI A+ G+W EA +R MK+K ++KQPG S +
Sbjct: 523 NVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWI 582
Query: 528 E 528
E
Sbjct: 583 E 583
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 152/311 (48%), Gaps = 42/311 (13%)
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+ +V+ N +I SK G + ARR+F M E DV++WT++ISGY ++EA LF+R
Sbjct: 49 DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDR 108
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
+ + N T+ A++ Y R + A F+ M + ++V+WN MI G+AQ+ R
Sbjct: 109 VD---AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNK----NVVSWNTMIDGYAQNGR 161
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+ A+ LF+ M + N ++ + Q G + E L RM DV + +A
Sbjct: 162 IDSAMYLFEKMPERNVVSWNTVMSMLAQCGRI-------EEARRLFDRMP-ERDVISWTA 213
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM--- 381
+I SK G + +AR LF+ +NV SWNAMI Y ++ +D +++LFERM E +
Sbjct: 214 MIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSW 273
Query: 382 ------------------------RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
+ N ++ ++++ C G E+ L+IF M G
Sbjct: 274 NTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGA 333
Query: 418 KISKEHYACVV 428
K ++ + V+
Sbjct: 334 KPNQGTFVSVL 344
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 24/268 (8%)
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG--REIHALV 310
N MI+ ++ R EA +LF M +P+ +T T V+ +G I+ G E L
Sbjct: 56 NWMITNLSKDGRIMEARRLFDEMR----EPDVITWTTVI-----SGYIKCGMIEEARRLF 106
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
R+ +V T +A++ Y + + DA LF KNV SWN MI Y ++G +DS++
Sbjct: 107 DRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAM 166
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
LFE+M E N V+ +V+S + G +E+ +F M ER + + ++
Sbjct: 167 YLFEKMPER----NVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVIS-----WTAMIAG 217
Query: 431 LCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGF 490
L ++GR+ EA L ++P S A G + R D A+ + E E L P
Sbjct: 218 LSKNGRIDEARLLFDRMPERNVVSW-NAMITGYAQNLRLDEALDLFERMPERDL--PSWN 274
Query: 491 VMLSNICAADGEWHEAENLRKIMKEKNV 518
M++ + +G+ A L M +KNV
Sbjct: 275 TMITGLI-QNGDLRRARKLFNEMPKKNV 301
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+LG C L +G+QVH ++ + + S L+ +Y+ CG++ +AR +FD
Sbjct: 343 VLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQ 402
Query: 78 VFMLNW--MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
+++W ++ A A G +EAI +F MR+ ++ + T+ +L AC
Sbjct: 403 RDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSAC 450
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 277/547 (50%), Gaps = 47/547 (8%)
Query: 36 HALLC---TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTG 92
HAL C + N++ S L+ +Y G V+ AR VFD +P N F + MV A
Sbjct: 140 HALACKIPSAVSNVYVCTS-LLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEK 198
Query: 93 NFQEAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
+EA F LM E ++F + VL A L + G+Q+H + + G + VSV
Sbjct: 199 CSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVE 258
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N+L+ MY+K G + +A VF ER+ ++W++MI+GY + D AV +F +M G
Sbjct: 259 NSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFT 318
Query: 212 PNQFTY-----------------------------------NAIIASYARRGDSNAAFAF 236
P +FT+ +A++ YA+ G A
Sbjct: 319 PTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEG 378
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F ++ + D+V W AM+SG Q+ EAL L+ M GI P+ T+ L+A
Sbjct: 379 FDQL----YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAG 434
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+++ G+++H + + GL + GSAL MYSKCG+L+D ++F ++V +WN++
Sbjct: 435 IAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSI 494
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I + ++G + +++LFE M EG + +T I++L ACSH GLV++G E F M + YG
Sbjct: 495 ISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYG 554
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
+ +HYAC+VD+L R+G + EA D + + + + C D+ G
Sbjct: 555 LTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAG 614
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEF 533
E E+G +++LSNI A+ +W++ E +R +M+ + V K PG S VE + + F
Sbjct: 615 ERLMELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVF 674
Query: 534 VEKEVQN 540
V E Q+
Sbjct: 675 VVGEQQH 681
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 159/531 (29%), Positives = 274/531 (51%), Gaps = 18/531 (3%)
Query: 4 LIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGD 62
I P +++ + G SK + Q Q+HA + ++L+ SL ++L+ +
Sbjct: 73 FIPPTTPTEAHFISLIHG----SKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKS 128
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
+N + VF+ N+F N ++ +F AI +F LM + ++ T+ VLK+
Sbjct: 129 INHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKS 188
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER----- 177
GL + G +H + + G E D V +L+DMY K L SA +VF ER
Sbjct: 189 MAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGS 248
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
+ W +I G C + +AV LF+ M + +++ +I +A+ GD + A F
Sbjct: 249 SALLWNVLIKGCCKAGSMKKAVKLFKAMP----KKENVSWSTLIDGFAKNGDMDRAMELF 304
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+M + ++V+W M+ GF+++ +AL +F ML G++PN T+ L A
Sbjct: 305 DQMPEK----NVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKI 360
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
G ++ G IH + GLH+ G+AL+DMY+KCG+++ A +F T K++ +W MI
Sbjct: 361 GGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMI 420
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
+ HG + +I F++M+ G++ +EV +++L+AC H G V+ GL F SM+ Y +
Sbjct: 421 WGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCI 480
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
+ S +HY +VDML RSG++ EA + ++PM + GA C H + +A
Sbjct: 481 EPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALN 540
Query: 478 EFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ ++ ++ LSN AA G+W +AE +R +M+ + V K G+S +E
Sbjct: 541 KLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIE 591
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 294/570 (51%), Gaps = 55/570 (9%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVF 70
V Y+ +L C +++L+ G ++H + ++F + + L+ +Y CG V A F
Sbjct: 106 VTYV-AILNACASTESLKDGMEIHGQILQQGFEGDVF-VGTALINMYNKCGSVRGAWDSF 163
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR--------CNKFTFSIVLKA 122
++ + +V ++W M +A + Q F+L R ++YR NK T V A
Sbjct: 164 KRLEHRDV--VSWTAMIAACVQHDQ-----FALAR-WLYRRMQLDGVVPNKITLYTVFNA 215
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
+ +GK V+ + + E+DV V N+ ++M+ GLL ARR+F M +RDVV+W
Sbjct: 216 YGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTW 275
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII--------------------- 221
+I+ Y EAV LF R++ +G++ N T+ ++
Sbjct: 276 NIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKE 335
Query: 222 ASYARRGD-SNAAFAFFSRMTAEG-----FV----PDLVTWNAMISGFAQSKRENEALKL 271
A Y R + A + + R A G FV D++TW M +AQ+ EAL+L
Sbjct: 336 AGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQL 395
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F+ M + G +P + T+ VL ++Q GR+IH+ + +++ +ALI+MY K
Sbjct: 396 FQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGK 455
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
CG + +A ++FE +++ WN+M+G Y +HG D +++LF +M +G++A+ V+ +SV
Sbjct: 456 CGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSV 515
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
LSA SH G V G + F +M + + + + E Y CVVD+L R+GR+ EA D++ ++ +
Sbjct: 516 LSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCL 575
Query: 452 TNSMAG-AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR 510
+ + C H + D A E+ E +V+LSN+ AA G+W +R
Sbjct: 576 PDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMR 635
Query: 511 KIMKEKNVQKQPGFSRVEKRN---EFVEKE 537
K+M+ + V+K+PG S +E N EF+E +
Sbjct: 636 KLMRSRGVKKEPGRSSIEILNRVHEFLEGD 665
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 147/491 (29%), Positives = 236/491 (48%), Gaps = 48/491 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL +C +K + G++VH + +L L+ +YA CG V A+ VF+ + +
Sbjct: 10 LLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKD 69
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
VF M+ G++ A+G F M+E K T+ +L AC +K G ++H
Sbjct: 70 VFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHG 129
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
Q GFE DV VG ALI+MY+KCG + A F + RDVVSWT+MI+ +
Sbjct: 130 QILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFAL 189
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDS-------------------------NA 232
A L+ RM+L+G+ PN+ T + +Y GD N+
Sbjct: 190 ARWLYRRMQLDGVVPNKITLYTVFNAY---GDPNYLSEGKFVYGLVSSGVMESDVRVMNS 246
Query: 233 AFAFF--------SRMTAEGFVP-DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
A F +R E V D+VTWN +I+ + Q++ EA++LF + G+K N
Sbjct: 247 AVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKAN 306
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
++T +L S+ G+ IH LV G D +AL+ +Y +C + A +F
Sbjct: 307 DITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFV 366
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
K+V +W M Y ++G +++LF+ M EG R TL++VL C+H ++K
Sbjct: 367 DMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQK 426
Query: 404 GLEIFRSMKE-RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAF 459
G +I + E R+ +++ E +++M + G+M EA + ++ + V NSM GA+
Sbjct: 427 GRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAY 484
Query: 460 RNGCNIHGRRD 470
HG D
Sbjct: 485 AQ----HGYYD 491
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 157/333 (47%), Gaps = 39/333 (11%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
F +L+ C ++ G++VH GFE + V LI MY++CG + A++VF +
Sbjct: 7 FVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 66
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------ 217
+DV +WT MI YC D A+ +F +M+ E + P + TY
Sbjct: 67 RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 126
Query: 218 -----------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
A+I Y + G A+ F R+ D+V+W AMI+
Sbjct: 127 IHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR----DVVSWTAMIAACV 182
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q + A L++ M + G+ PN +T+ V A G + G+ ++ LV + DV
Sbjct: 183 QHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVR 242
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
++ ++M+ G L DAR LFE ++V +WN +I Y ++ ++ LF R+ ++G
Sbjct: 243 VMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDG 302
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
++AN++T + +L+ + + KG I +KE
Sbjct: 303 VKANDITFVLMLNVYTSLTSLAKGKVIHELVKE 335
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 70/127 (55%)
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
KP+ +LQ ++ GR +H V G + LI MY++CGS+ +A+
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+FEI K+V +W MIG Y + G D ++ +F +M EE + +VT +++L+AC+
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 401 VEKGLEI 407
++ G+EI
Sbjct: 121 LKDGMEI 127
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 167/577 (28%), Positives = 284/577 (49%), Gaps = 90/577 (15%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKS--------KALRQGKQVHALLCTNDL-NIFSLKS 51
M R P++ +SV+ +LG C ++ +A R G+ +HAL+ + + +
Sbjct: 233 MCRSGVPVDPVSVS---SVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGN 289
Query: 52 KLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIY 109
L+ +Y C +++ A VF+ +P+ V +++W ++ + F G+ +A+ SLM+E +
Sbjct: 290 SLIDMYTKCVEMDEAVKVFESLPS--VTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGF 347
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
N+ T+S +L +C+ K + VH SAR
Sbjct: 348 EPNEVTYSNLLASCI------KARDVH-----------------------------SARA 372
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------ 223
+F + V +W +++SGYC + + + LF RM+ + ++P++ T I++S
Sbjct: 373 MFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGI 432
Query: 224 -----------------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
Y++ G A + F++MT D+V WN+
Sbjct: 433 LDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTER----DVVCWNS 488
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
+ISG EA FK M +GI P + ++ + SI GR+IHA V + G
Sbjct: 489 IISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDG 548
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+V+ GSALIDMY+KCG++ DAR F+ +KN+ +WN MI Y ++G+ D ++ELFE
Sbjct: 549 YDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFE 608
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
ML + + VT I+VL+ CSH GLV+K + F SM+ YG+ EHY C++D L R+
Sbjct: 609 YMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRA 668
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
GR VE L+ ++P + C +H +L E F + + P +V+LS
Sbjct: 669 GRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLS 728
Query: 495 NICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
NI A+ G +A +R +M + V K G+S +++++
Sbjct: 729 NIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKD 765
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 208/419 (49%), Gaps = 16/419 (3%)
Query: 30 RQGKQVHALLCTNDLNIFSLKSKLVGVYAGC--GDVNSARLVFDKIPNPNVFMLNWMVMA 87
R G HALL L + S + A C GD+++AR + +P N N ++ A
Sbjct: 55 RAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISA 114
Query: 88 SAFT-GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
A + G+ EA+ + MR FT + VL AC GL + G++ H VA ++G +
Sbjct: 115 LARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDA 174
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
+ V NAL+ MY+KCG + A R+F+GM + VS+T+M+ G +D+A+ LF RM
Sbjct: 175 NQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMC 234
Query: 207 LEGLEPNQFTYNAIIASYAR--RGDSNAAFAF------FSRMTAEGFVPDLVTWNAMISG 258
G+ + + ++++ + A+ D + A AF + + +GF D N++I
Sbjct: 235 RSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDM 294
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
+ + +EA+K+F+ + I N+ +TG Q G ++ E+ +L+ G +
Sbjct: 295 YTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAV----EVLSLMQEAGFEPN 350
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
T S L+ K + AR +F+ +V +WN ++ Y + +IELF RM
Sbjct: 351 EVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQH 410
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
+ ++ + TL +LS+CS G+++ G ++ S R+ + + +VDM + G++
Sbjct: 411 QNVQPDRTTLAVILSSCSKLGILDFGRQV-HSASVRFLLHNDMFVASGLVDMYSKCGQI 468
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 144/325 (44%), Gaps = 81/325 (24%)
Query: 147 DVSVGNALIDMYSKCGL-------------------------------LCSARRVFHGMF 175
D + N L+++YS+ GL L +AR + GM
Sbjct: 42 DTFLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMP 101
Query: 176 ERDVVSWTSMISGYCNVSKVD--EAVVLFERMKLEGLEP--------------------- 212
R+ VSW ++IS S D EAV ++ RM+ EGL P
Sbjct: 102 RRNAVSWNTVISALAR-SPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDG 160
Query: 213 --------------NQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
NQF NA++ Y + G A F M P+ V++ AM+ G
Sbjct: 161 RRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMAR----PNEVSFTAMMGG 216
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG--------LTGSIQIGREIHALV 310
AQ+ ++AL+LF M SG+ + V+V+ VL A + + ++G+ IHALV
Sbjct: 217 LAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALV 276
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
R G D G++LIDMY+KC + +A +FE + SWN +I +G+ G ++
Sbjct: 277 VRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAV 336
Query: 371 ELFERMLEEGMRANEVTLISVLSAC 395
E+ M E G NEVT ++L++C
Sbjct: 337 EVLSLMQEAGFEPNEVTYSNLLASC 361
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 12/245 (4%)
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN-EALK 270
PN ++YNA +++ R GD +AA M + V+WN +IS A+S + EA++
Sbjct: 72 PNDYSYNAALSAACRAGDLDAARDLLGGMPRR----NAVSWNTVISALARSPGDGGEAVE 127
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
++ M G+ P + T+ VL A G ++ GR H + ++GL + F +AL+ MY+
Sbjct: 128 MYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYT 187
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
KCGS+ DA LF N S+ AM+G + G +D ++ LF RM G+ + V++ S
Sbjct: 188 KCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSS 247
Query: 391 VLSACSHGGLVEKGL-EIFRSMKERYGVKI-----SKEHYA-CVVDMLCRSGRMVEAYDL 443
VL AC+ + + FR + + + + S +H ++DM + M EA +
Sbjct: 248 VLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKV 307
Query: 444 LRQVP 448
+P
Sbjct: 308 FESLP 312
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 166/531 (31%), Positives = 256/531 (48%), Gaps = 48/531 (9%)
Query: 6 FPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCG 61
FP++ S LL K AL G ++H L + F ++S L+ +YA CG
Sbjct: 111 FPLDRFS---FPPLLKAVSKLSALNLGLEIHGL--ASKFGFFHADPFIQSALIAMYAACG 165
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLK 121
+ AR +FDK+ + +V N M+ + ++ + + M+ + VL
Sbjct: 166 RIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLS 225
Query: 122 ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS 181
AC ++ GK +H GF + +L++MY+ CG + AR V+ + + +V
Sbjct: 226 ACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVV 285
Query: 182 WTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT 241
T+M+SGY + V +A + F RM
Sbjct: 286 STAMLSGYAKLGMVQDARFI-----------------------------------FDRMV 310
Query: 242 AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
+ DLV W+AMISG+A+S + EAL+LF M I P+ +T+ V+ A G++
Sbjct: 311 EK----DLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALV 366
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
+ IH + G + +ALIDMY+KCG+L AR +FE KNV SW++MI +
Sbjct: 367 QAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFA 426
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
HG DS+I LF RM E+ + N VT I VL ACSH GLVE+G + F SM + + +
Sbjct: 427 MHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQR 486
Query: 422 EHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFE 481
EHY C+VD+ CR+ + +A +L+ +P + G+ + C HG +L E
Sbjct: 487 EHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLE 546
Query: 482 MGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ V+LSNI A + W + +RK+MK K V K+ SR+E NE
Sbjct: 547 LEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNE 597
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 9/231 (3%)
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
A + FS + P N ++ F++ L L+ + +G + + +L+
Sbjct: 68 ALSLFSHIPN----PPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLK 123
Query: 293 AGGLTGSIQIGREIHALVCRMGL-HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A ++ +G EIH L + G H D F SALI MY+ CG + DAR LF+ ++V
Sbjct: 124 AVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVV 183
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
+WN MI Y ++ D ++L+E M G + + L +VLSAC+H G + G I + +
Sbjct: 184 TWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFI 243
Query: 412 KERYGVKISKEHYACVVDMLCRSGRM---VEAYDLLRQVPMYVTNSMAGAF 459
K+ G ++ +V+M G M E YD L M V+ +M +
Sbjct: 244 KDN-GFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGY 293
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 277/547 (50%), Gaps = 47/547 (8%)
Query: 36 HALLC---TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTG 92
HAL C + N++ S L+ +Y G V+ AR VFD +P N F + MV A
Sbjct: 34 HALACKIPSAVSNVYVCTS-LLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEK 92
Query: 93 NFQEAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
+EA F LM E ++F + VL A L + G+Q+H + + G + VSV
Sbjct: 93 CSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVE 152
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N+L+ MY+K G + +A VF ER+ ++W++MI+GY + D AV +F +M G
Sbjct: 153 NSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFT 212
Query: 212 PNQFTY-----------------------------------NAIIASYARRGDSNAAFAF 236
P +FT+ +A++ YA+ G A
Sbjct: 213 PTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEG 272
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
F ++ + D+V W AM+SG Q+ EAL L+ M GI P+ T+ L+A
Sbjct: 273 FDQL----YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAG 328
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+++ G+++H + + GL + GSAL MYSKCG+L+D ++F ++V +WN++
Sbjct: 329 IAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSI 388
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I + ++G + +++LFE M EG + +T I++L ACSH GLV++G E F M + YG
Sbjct: 389 ISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYG 448
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
+ +HYAC+VD+L R+G + EA D + + + + C D+ G
Sbjct: 449 LTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAG 508
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEF 533
E E+G +++LSNI A+ +W++ E +R +M+ + V K PG S VE + + F
Sbjct: 509 ERLMELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVF 568
Query: 534 VEKEVQN 540
V E Q+
Sbjct: 569 VVGEQQH 575
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 170/543 (31%), Positives = 283/543 (52%), Gaps = 35/543 (6%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C L +G++VH + + + + L+ +Y CGDV SARL+FD++P
Sbjct: 201 CVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR 260
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N M+ G E + F MR + T + V+ AC L D + G+ +H
Sbjct: 261 DIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIH 320
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A GF D+SV N+L MY G A ++F M +D+VSWT+MISGY +
Sbjct: 321 AYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPE 380
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA-----FAFFSRMTAEGFVP---- 247
+A+ + M + ++P++ T A++++ A GD + A +R+ + V
Sbjct: 381 KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLI 440
Query: 248 ----------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
++++W ++I+G + R EAL F+ M ++ ++PN +
Sbjct: 441 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPNAI 499
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T+T L A G++ G+EIHA V R G+ +D F +AL+DMY +CG + A F +
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFN-S 558
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
+ K+V+SWN ++ Y + G +ELF+RM++ +R +E+T IS+L C +V +GL
Sbjct: 559 QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGL 618
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
F M+E YGV + +HYACVVD+L R+G + EA+ ++++P+ ++ GA N C I
Sbjct: 619 MYFSKMEE-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
H DL + FE+ +++L N+ A G+W E +R++MKE + G S
Sbjct: 678 HHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737
Query: 526 RVE 528
VE
Sbjct: 738 WVE 740
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 240/518 (46%), Gaps = 48/518 (9%)
Query: 19 LLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L+ C +A +G +V+ AL N L++ L + + ++ G++ A VF K+
Sbjct: 100 LVRLCEWKRAHEEGSKVYSVALSSMNSLSV-ELGNAFLAMFVRFGNLVDAWYVFGKMSER 158
Query: 77 NVFMLNWMVMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
N+F N +V A G F EAI Y ++ + + +TF VL+ C G+ D+ +G++V
Sbjct: 159 NLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREV 218
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + G+E D+ V NALI MY KCG + SAR +F M RD++SW +MISGY
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMG 278
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIAS-------------------------------- 223
E + LF M+ ++P+ T ++I++
Sbjct: 279 HEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338
Query: 224 ---YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
Y G A FSRM + D+V+W MISG+ + +A+ ++ M +
Sbjct: 339 TQMYLYAGSWREAEKLFSRMDCK----DIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSV 394
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
KP+ +TV VL A G + G E+H L + L V + LI+MYSKC + A
Sbjct: 395 KPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALD 454
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F KNV SW ++I + ++ +F R ++ ++ N +TL + L+AC+ G
Sbjct: 455 IFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFFRQMKMTLQPNAITLTAALAACARIGA 513
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
+ G EI + R GV + ++DM R GRM A++ V S
Sbjct: 514 LMCGKEIHAHVL-RTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQKKDV--SSWNILL 570
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
G + G+ + V + + + +R PD +S +C
Sbjct: 571 TGYSERGQGSVVVELFDRMVKARVR-PDEITFISLLCG 607
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 193/397 (48%), Gaps = 49/397 (12%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G +EA+ + M+E ++ F +++ C ++G +V++VA V +G
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELG 132
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM-KLEGL 210
NA + M+ + G L A VF M ER++ SW ++ GY DEA+ L+ RM + G+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGV 192
Query: 211 EPNQFTY-----------------------------------NAIIASYARRGDSNAAFA 235
+P+ +T+ NA+I Y + GD +A
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F RM D+++WNAMISG+ ++ +E LKLF M + P+ +T+T V+ A
Sbjct: 253 LFDRMPRR----DIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACE 308
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
L G ++GR+IHA V G +D+ ++L MY GS ++A LF K++ SW
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTT 368
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
MI Y + + + +I+ + M ++ ++ +E+T+ +VLSAC+ G ++ G+E+ +
Sbjct: 369 MISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL-----HKL 423
Query: 416 GVKISKEHYACV----VDMLCRSGRMVEAYDLLRQVP 448
+K Y V ++M + + +A D+ +P
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 161/553 (29%), Positives = 279/553 (50%), Gaps = 46/553 (8%)
Query: 20 LGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C + L GK +H L D ++F + S L+ +Y CG +N A VF + P P+
Sbjct: 249 LKSCAGLRKLLLGKVIHGFLKKVRIDGDMF-VGSALIDLYTKCGQMNDAVKVFMEYPKPD 307
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLM--REFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
V + ++ +G+ + A+ +FS M E + + T V AC L + K G+ V
Sbjct: 308 VVLWTSIISGYEQSGSPELALAFFSRMVVSEKV-SPDPVTLVSVASACAQLSNFKLGRSV 366
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + G +N + + N+L+ +Y K G + +A +F M ++D++SW++M++ Y +
Sbjct: 367 HGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAE 426
Query: 196 DEAVVLFERMKLEGLEPNQFTY-----------------------------------NAI 220
+ + LF M + ++PN T A+
Sbjct: 427 TDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTAL 486
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
+ Y + A F+RM + D++ W + SG+A + +E++ +F+ ML SG
Sbjct: 487 MDMYMKCFSPEKAVDLFNRMPKK----DVIAWAVLFSGYADNGMVHESMWVFRNMLSSGT 542
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+P+ + + +L G +Q +HA V + G + F G++LI++Y+KC S++DA
Sbjct: 543 RPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANK 602
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGG 399
+F+ K+V +W+++I YG HG + +++LF +M + N VT IS+LSACSH G
Sbjct: 603 VFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSG 662
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
L+++G+ +F M +Y +K + EHYA +VD+L R G + A D++ +PM + GA
Sbjct: 663 LIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGAL 722
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C IH + + F + +++LSNI + D WH A LR+++KEK +
Sbjct: 723 LGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLN 782
Query: 520 KQPGFSRVEKRNE 532
K G S VE +NE
Sbjct: 783 KIVGQSVVELKNE 795
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 192/396 (48%), Gaps = 45/396 (11%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIY- 109
+KL +YA ++ A +F + P+ V++ N ++ + F G + E + F M
Sbjct: 175 TKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSV 234
Query: 110 ----RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
R + ++ SI LK+C GL + GK +H ++ + D+ VG+ALID+Y+KCG +
Sbjct: 235 SIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMN 294
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL-EGLEPNQFTY------- 217
A +VF + DVV WTS+ISGY + A+ F RM + E + P+ T
Sbjct: 295 DAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASAC 354
Query: 218 ----------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDL 249
N+++ Y + G A F M+ + D+
Sbjct: 355 AQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDK----DI 410
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
++W+ M++ +A + E + L LF ML IKPN VTV VL+A +++ G +IH L
Sbjct: 411 ISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHEL 470
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
G ++ +AL+DMY KC S + A LF K+V +W + Y +GMV S
Sbjct: 471 AVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHES 530
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
+ +F ML G R + + L+ +L+ S G++++ +
Sbjct: 531 MWVFRNMLSSGTRPDAIALVKILTTISELGILQQAV 566
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 163/521 (31%), Positives = 263/521 (50%), Gaps = 45/521 (8%)
Query: 10 NLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGC--GDVNSA 66
L+V LL +C L KQ+H L L S+L+ YA ++ A
Sbjct: 8 QLNVEQTMSLLERCSNIGEL---KQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYA 64
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
R+VFD+I +PN M N M+ A + + + +EA+ + M N +TF +LKAC L
Sbjct: 65 RMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSAL 124
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
+ + Q+H + GF ++V N+L+ +Y+ G + SA +F + RD+VSW +MI
Sbjct: 125 SALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMI 184
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
G Y + G+ A+ F M +
Sbjct: 185 DG-----------------------------------YIKCGNVEMAYKIFQAMPEK--- 206
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
++++W +MI GF ++ EAL L + MLV+GIKP+ +T++ L A G+++ G+ I
Sbjct: 207 -NVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWI 265
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H + + + ID G ALIDMY KCG +K A +F K V +W A+IG + HG
Sbjct: 266 HTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKG 325
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
+++ F +M + G++ T +VL+ACSH GLVE+G +F SM Y +K EHY C
Sbjct: 326 SEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGC 385
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
+VD+L R+G + EA + + +P+ ++ G+ N C++H +L +G+ E+
Sbjct: 386 MVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELDPEH 445
Query: 487 PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
++ L++I AA GEW EA +R +K K + PG S +
Sbjct: 446 DGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTI 486
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 167/521 (32%), Positives = 265/521 (50%), Gaps = 62/521 (11%)
Query: 69 VFDKIPNPNVFMLNW--MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI--VLKACV 124
V+ P P L+W + +A G+F++AI F MR + S+ LK+C
Sbjct: 7 VYTPWPPP----LSWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPASLPAALKSCA 62
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS------------------ 166
L G +HA+A + G D NAL+++Y C L CS
Sbjct: 63 ALGLSALGASLHALAIRSGAFADRFTANALLNLY--CKLPCSYLHSTGVTSVGGTGSSTA 120
Query: 167 ---ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
R+VF M ERDVVSW +++ G + EA+VL +M EG P+ FT ++++
Sbjct: 121 LESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPI 180
Query: 224 YA-----RRGDSNAAFA-----------------FFSRMTAEGF---------VPDLVTW 252
+A +RG FA ++ T + V D + W
Sbjct: 181 FAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILW 240
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N++++G AQ+ EAL +F+ ML +G++P VT + ++ G S++ G+++HA V R
Sbjct: 241 NSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIR 300
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
G +VF S+LIDMY KCG + A +F+ +V SW AMI Y HG ++ L
Sbjct: 301 GGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVL 360
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
FERM + N +T ++VL+ACSH GLV+KG + F+SM + YG+ + EH A + D+L
Sbjct: 361 FERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILG 420
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
R+G + EAY+ + ++ + T S+ C +H LA + ++ E+ R V+
Sbjct: 421 RAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVV 480
Query: 493 LSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
LSN+ +A G W+EA +LRK M++K ++K P S +E +N+
Sbjct: 481 LSNMYSASGRWNEAAHLRKSMRKKGMKKDPACSWIEVKNKL 521
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 163/328 (49%), Gaps = 18/328 (5%)
Query: 29 LRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
+++G +VH N D ++F + S L+ +YA C + + VFD +P + + N ++
Sbjct: 187 VKRGSEVHGFAVRNGFDNDVF-VGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLA 245
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
A G+ +EA+G F M + R TFS ++ C L ++ GKQ+HA + GFE+
Sbjct: 246 GCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFED 305
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
+V + ++LIDMY KCG + A +F M DVVSWT+MI GY EA+VLFERM+
Sbjct: 306 NVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERME 365
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRE 265
L +PN T+ A++ + + G + + +F M+ G VP L A+ ++
Sbjct: 366 LGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGEL 425
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM-----GLHIDVF 320
+EA M IKP + +L+A + + + E+ + + G H+
Sbjct: 426 DEAYNFISKM---QIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHV--- 479
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIK 348
L +MYS G +A L + R K
Sbjct: 480 ---VLSNMYSASGRWNEAAHLRKSMRKK 504
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 198/443 (44%), Gaps = 55/443 (12%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS------LKSKLVGVYAGCGD---VNSARLVF 70
LG + + A+R G LN++ L S V G G + S R VF
Sbjct: 69 LGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRKVF 128
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
D++ +V N +V+ A G EA+ M +R + FT S VL D+K
Sbjct: 129 DEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVK 188
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
+G +VH A + GF+NDV VG++LIDMY+ C + +VF + RD + W S+++G
Sbjct: 189 RGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCA 248
Query: 191 NVSKVDEAVVLFERMKLEGLEP-----------------------------------NQF 215
V+EA+ +F RM G+ P N F
Sbjct: 249 QNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVF 308
Query: 216 TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
+++I Y + G+ + A F RM + PD+V+W AMI G+A EAL LF+ M
Sbjct: 309 ISSSLIDMYCKCGEISIAHHIFDRMCS----PDVVSWTAMIMGYALHGPAREALVLFERM 364
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
+ KPN++T VL A G + G + ++ G+ + +AL D+ + G
Sbjct: 365 ELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGE 424
Query: 335 LKDARTLFEITRIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLEEGMRA--NEVTLISV 391
L +A +IK AS W+ ++ H + E+ ++++E R+ + V L ++
Sbjct: 425 LDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNM 484
Query: 392 LSACSHGGLVEKGLEIFRSMKER 414
SA G + + +SM+++
Sbjct: 485 YSA---SGRWNEAAHLRKSMRKK 504
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 14/238 (5%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
L+ C +LR GKQ+HA + N+F + S L+ +Y CG+++ A +FD++ +P
Sbjct: 278 LIPVCGNLASLRFGKQLHAYVIRGGFEDNVF-ISSSLIDMYCKCGEISIAHHIFDRMCSP 336
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQ 134
+V M+M A G +EA+ F M + N TF VL AC GL+D K K
Sbjct: 337 DVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVD-KGWKY 395
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS-WTSMISGYCNVS 193
+++ G + AL D+ + G L A M + S W++++
Sbjct: 396 FKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFISKMQIKPTASVWSTLL----RAC 451
Query: 194 KVDEAVVLFERM--KLEGLEPNQFTYNAIIAS-YARRGDSNAAFAFFSRMTAEGFVPD 248
+V + +L E + K+ LEP + ++++ Y+ G N A M +G D
Sbjct: 452 RVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRKSMRKKGMKKD 509
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 165/492 (33%), Positives = 252/492 (51%), Gaps = 62/492 (12%)
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC----------- 111
V A VF ++ +PN+ + N M+ A A ++A+ + M RC
Sbjct: 62 VTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRM----LRCPTSPPDGHAGG 117
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
++FT+ +LKAC G ++ GKQVH + G ++ V N+LI+MY++ G L A +VF
Sbjct: 118 DRFTYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVF 177
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M ERDVVSW N +I+++AR G
Sbjct: 178 DEMRERDVVSW-----------------------------------NMLISAHARLGQMR 202
Query: 232 AAFAFFSRMTAEGFVPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
A A F+ M PD +VTW AM+SG+ A+ F+ M G +P++V++
Sbjct: 203 KATALFNSM------PDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVA 256
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
VL A G++++GR I+A R G+ +AL++MY+KCG + A LF+ K+
Sbjct: 257 VLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKD 316
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKGLEIF 408
V SW+ +IG HG ++ LF M +EG +R N +T + +LSACS+ GLV++GL F
Sbjct: 317 VISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHF 376
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
M + YGV+ EHY CVVD+L RSG++ A DL+R +P+ + G+ + C HG
Sbjct: 377 DRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGD 436
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
D AV E E+ VML+N+ AA W + + RK ++ ++++K PG S +E
Sbjct: 437 VDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLIE 496
Query: 529 KRN---EFVEKE 537
N EFV E
Sbjct: 497 VGNVVREFVAGE 508
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 38/307 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPN-- 75
LL C + AL GKQVH + + + ++ ++ L+ +Y GD+ A VFD++
Sbjct: 125 LLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERD 184
Query: 76 ---------------------------PNVFMLNWMVMASAFT--GNFQEAIGYFSLMRE 106
P+ ++ W M S +T G++ A+ F M+
Sbjct: 185 VVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQT 244
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
+ + + VL AC L ++ G+ ++A + G + NAL++MY+KCG +
Sbjct: 245 EGFEPDDVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQ 304
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG-LEPNQFTYNAIIASYA 225
A ++F GM ++DV+SW+++I G + EAV LF M+ EG + PN T+ ++++ +
Sbjct: 305 ALQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACS 364
Query: 226 RRGDSNAAFAFFSRMT-AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
G + + F RM G P + + ++ +S + AL L + M V P +
Sbjct: 365 YAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPV----PAD 420
Query: 285 VTVTGVL 291
V G L
Sbjct: 421 AKVWGSL 427
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + L G+ ++A C L + + L+ +YA CG ++ A +FD + +
Sbjct: 257 VLPACAQLGTLELGRWIYAY-CKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADK 315
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLM-REFIYRCNKFTFSIVLKAC--VGLLDIKKGK 133
+V + ++ A G EA+ F+ M +E R N TF +L AC GL+D +
Sbjct: 316 DVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVD-EGLS 374
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+ G E V ++D+ + G + A + M D W S++S +
Sbjct: 375 HFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSH 434
Query: 193 SKVDEAVVLFERMKLEGLEPNQ 214
VD AV+ ER L LEP+
Sbjct: 435 GDVDTAVLAAER--LVELEPDD 454
>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
Length = 1026
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 161/548 (29%), Positives = 290/548 (52%), Gaps = 43/548 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C +K L K +HA N + S+ + L+ +YA CGD++++ +F K+
Sbjct: 449 VISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRM 508
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL-------DIK 130
+ N M+ A G+ + ++ F M + F +V +GL+ D
Sbjct: 509 LISWNTMISGFAEIGDSETSLTLFCQMFH-----EEVWFDLV--TLIGLISSLSVSEDAI 561
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
G+ VH++A + G +DVS+ NALI MY+ CG++ + +++F+ R+ +++ +++SGY
Sbjct: 562 VGESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYR 621
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY------------NAIIASYARRGDS-------N 231
+ ++ + LF +M +PN T I SYA R +
Sbjct: 622 KNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVCQSQLQGKCIHSYAVRNFTRLETPLFT 681
Query: 232 AAFAFFSRM-------TAEGFVP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+A +SR T V +L+ WNA +S Q K+ + + FK ML ++P
Sbjct: 682 SAMGMYSRFNNIEYCRTIFSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRP 741
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ VT+ ++ A G+ I A++ + G +++ +ALID +S+CGS+ AR LF
Sbjct: 742 DEVTMLALISACSQLGNADFAACIMAVILQKGFSMNILVLNALIDTHSRCGSISFARELF 801
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ + K+ +W AMI Y HG +++++LF M++ G+ +++T +S+LSACSH GLVE
Sbjct: 802 DSSVEKDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACSHNGLVE 861
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G +F+S++ +G+ EHYAC+VD+L R+G + EAYD++R +P ++++ +
Sbjct: 862 QGRTLFKSLQADHGITPRMEHYACMVDLLGRTGHLDEAYDIVRSMPFTPSDNLLESLLGA 921
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C HG + ++G+ + K +VMLSNI A+ G+W + E LR M+ K ++K
Sbjct: 922 CRFHGNYKIGESVGKLLIKSEYGKSRSYVMLSNIYASAGKWSDCEQLRLDMEAKGLRKNV 981
Query: 523 GFSRVEKR 530
G ++E +
Sbjct: 982 GVRKLESQ 989
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 203/414 (49%), Gaps = 41/414 (9%)
Query: 19 LLGKCMKSKALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++G C + G +HA L ++ SL S L+ +YA D++S+RLVFD P +
Sbjct: 246 IVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKD 305
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL-DIKKGKQVH 136
+ N M+ A N++EA F LM N T VL +C LL I G+ VH
Sbjct: 306 LVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVH 365
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ ++G VSV +AL+ MYSK G L S+ +F E++ + W SMISGY ++ +
Sbjct: 366 GMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWN 425
Query: 197 EAVVLFERMKLEGLEPN-----------------------------------QFTYNAII 221
A+ F +M++ G+ P+ Q NA++
Sbjct: 426 MALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALL 485
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
A YA GD + ++ F +M V L++WN MISGFA+ +L LF M +
Sbjct: 486 AMYADCGDISTSYTLFQKME----VRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVW 541
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+ VT+ G++ + ++ +G +H+L + G DV +ALI MY+ CG ++ + L
Sbjct: 542 FDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQL 601
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
F +N ++NA++ Y K+ + + + LF +M++ + N VTL+++L C
Sbjct: 602 FNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVC 655
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 214/448 (47%), Gaps = 48/448 (10%)
Query: 53 LVGVYAGCGDVNSARLVFDKI--PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
LV Y G SA L+F + P V+ LN +V + G +E + + + F
Sbjct: 79 LVERYVSFGKPASAALLFAEAYRGRPAVYSLNLVVRCFSDHGFHRELLDLYRGLCGF--G 136
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ FTF V++AC ++ G+QVH + G ++V V AL+DMY+K G + +RRV
Sbjct: 137 SDNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRV 196
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII---ASYARR 227
F M RD++SW +M+SGY EAV + M+ G+ PN T I+ S R
Sbjct: 197 FDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDR 256
Query: 228 --GDSNAAFAF--------------------FSRMTAEGF------VPDLVTWNAMISGF 259
GDS AFA F +++ V DLV++N+MIS +
Sbjct: 257 VAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAY 316
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA-GGLTGSIQIGREIHALVCRMGLHID 318
Q EA ++F+ M +G+ PN +T+ VL + L I G +H ++ ++GL
Sbjct: 317 MQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQ 376
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
V SAL+ MYSK G L + LF KN WN+MI Y + + +++ F +M
Sbjct: 377 VSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQI 436
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD----MLCRS 434
G+ + T+I+V+S C + K L + +S+ Y V+ E Y V++ M
Sbjct: 437 AGVAPDATTVINVISGCRY----TKDLHVAKSI-HAYAVRNRFESYQSVMNALLAMYADC 491
Query: 435 GRMVEAYDLLR--QVPMYVT-NSMAGAF 459
G + +Y L + +V M ++ N+M F
Sbjct: 492 GDISTSYTLFQKMEVRMLISWNTMISGF 519
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 192/411 (46%), Gaps = 41/411 (9%)
Query: 23 CMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C + L+ G+QVH +L T + +++ L+ +YA G ++ +R VFD + ++
Sbjct: 149 CTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISW 208
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
N MV + G F+EA+ M++ N T ++ C D G +HA A +
Sbjct: 209 NAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALK 268
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
G +D S+ +ALI MY+ L S+R VF +D+VS+ SMIS Y S EA +
Sbjct: 269 GGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEV 328
Query: 202 FERMKLEGLEPNQFTY------------------------------------NAIIASYA 225
F M G+ PN T +A+++ Y+
Sbjct: 329 FRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMYS 388
Query: 226 RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ G +++ F T + + + WN+MISG+ + N AL F M ++G+ P+
Sbjct: 389 KLGKLDSSSLLFCCFTEK----NNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDAT 444
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
TV V+ T + + + IHA R +AL+ MY+ CG + + TLF+
Sbjct: 445 TVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKM 504
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
++ + SWN MI + + G ++S+ LF +M E + + VTLI ++S+ S
Sbjct: 505 EVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLS 555
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 169/376 (44%), Gaps = 51/376 (13%)
Query: 4 LIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDV 63
LI I++LSV+ D ++G+ + S A++ G C +D+ SL + L+ +YA CG V
Sbjct: 547 LIGLISSLSVSE-DAIVGESVHSLAIKSG-------CISDV---SLTNALITMYANCGIV 595
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKA 122
+ + +F+ + N N +M+ N E I F+ M + + N T +L
Sbjct: 596 EAGQQLFNSFCSRNTITYN-ALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPV 654
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C L +GK +H+ A + + + + + MYS+ + R +F + R+++ W
Sbjct: 655 CQSQL---QGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSLVSARNLIVW 711
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA 242
+ +S + D V F+ M + P++ T A+I++ ++ G+++ A + +
Sbjct: 712 NAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNADFAACIMAVILQ 771
Query: 243 EGFV-------------------------------PDLVTWNAMISGFAQSKRENEALKL 271
+GF D VTW AMI+ ++ AL L
Sbjct: 772 KGFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVTWGAMINAYSMHGNGEAALDL 831
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYS 330
F M+ SG+ P+++T +L A G ++ GR + +L G+ + + ++D+
Sbjct: 832 FSMMIDSGVDPDDITFVSILSACSHNGLVEQGRTLFKSLQADHGITPRMEHYACMVDLLG 891
Query: 331 KCGSLKDARTLFEITR 346
+ G L +A ++I R
Sbjct: 892 RTGHLDEA---YDIVR 904
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 247/484 (51%), Gaps = 41/484 (8%)
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
+ A +FD IP P VF+ N ++ A + G + ++ M N+ +F+ + A
Sbjct: 32 IPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSA 91
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
C L ++G+ +H + GF DV AL+DMY+K GLL AR+ F M RDV +W
Sbjct: 92 CASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTW 151
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA 242
N++IA YAR GD A F M A
Sbjct: 152 -----------------------------------NSMIAGYARCGDLEGALELFRLMPA 176
Query: 243 EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSIQ 301
++ +W AMISG+AQ+ + +AL +F M + ++PN VT+ VL A G+++
Sbjct: 177 R----NVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALE 232
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE-ITRIKNVASWNAMIGCY 360
+G I G +++ +AL++MY++CG + A +FE I +N+ SWN+MI
Sbjct: 233 VGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGL 292
Query: 361 GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKIS 420
HG D +IELF +ML EG ++VT + VL AC+HGG+V +G F SM+ + +
Sbjct: 293 AVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPK 352
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF 480
EHY C+VD+L R+G + EA+DL+ ++PM + + G C+ HG +LA F
Sbjct: 353 LEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALF 412
Query: 481 EMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQN 540
E+ P +V+LSNI A G W LRK+MK + K G+S +E+ + V++
Sbjct: 413 ELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVED 472
Query: 541 ESKA 544
S +
Sbjct: 473 RSHS 476
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 6/258 (2%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI-Y 109
+ ++ YA CGD+ A +F +P NV M+ A G + +A+ F +M E
Sbjct: 152 NSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEM 211
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
R N+ T + VL AC L ++ G+++ A G+ ++ V NAL++MY++CG + A
Sbjct: 212 RPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWG 271
Query: 170 VFHGM-FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
VF + R++ SW SMI G + DEA+ LF +M EG P+ T+ ++ + G
Sbjct: 272 VFEEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGG 331
Query: 229 DSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
FF M + P L + M+ ++ EA L +L ++P++V
Sbjct: 332 MVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDL---ILRMPMEPDSVVW 388
Query: 288 TGVLQAGGLTGSIQIGRE 305
+L A G +++ +
Sbjct: 389 GTLLGACSFHGHVELAEK 406
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 23/231 (9%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L +L C AL G+++ N N++ + + L+ +YA CG ++ A VF++I
Sbjct: 218 LASVLPACANLGALEVGERIEVYARGNGYFKNLY-VSNALLEMYARCGRIDKAWGVFEEI 276
Query: 74 PN-PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
N+ N M+M A G EAI F M + TF VL AC + +G
Sbjct: 277 DGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEG 336
Query: 133 KQVHAVATQMGFENDVSVGNAL------IDMYSKCGLLCSARRVFHGM-FERDVVSWTSM 185
+ E D S+ L +D+ + G L A + M E D V W ++
Sbjct: 337 QHFFE-----SMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTL 391
Query: 186 I---SGYCNVSKVDEAV-VLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
+ S + +V ++A LFE LE P + + I + A R D A
Sbjct: 392 LGACSFHGHVELAEKAAGALFE---LEPSNPGNYVILSNIYATAGRWDGVA 439
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 270/529 (51%), Gaps = 46/529 (8%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C K + Q K++HA + L+ + L +K++ G V+ A L+F ++ +PN+
Sbjct: 17 LKNCFK---ITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNI 73
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC---NKFTFSIVLKACVGLLDIKKGKQV 135
F N ++ A + AI F M +KFTF V+K+C G+L + G QV
Sbjct: 74 FTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQV 133
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + + G + NALIDMY+K G L +A +VF M RDV+SW S+I G
Sbjct: 134 HGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFG------- 186
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
Y + G N+A F M V +V+W M
Sbjct: 187 ----------------------------YVKLGQMNSARELFDDMP----VRTIVSWTTM 214
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
I+G+ + +AL +F+ M + GI+P+ +++ VL A G++++G+ IH + G
Sbjct: 215 ITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGF 274
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+ALI+MY+KCG + +A LF+ K+V SW+ MIG HG +I+LFE
Sbjct: 275 LRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEE 334
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M + + NE+T + VL ACSH GL ++GL+ F M Y ++ EHY C++D+L RSG
Sbjct: 335 MCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSG 394
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
+ +A D + ++P+ + + + + C IH +AV ++ E+ + +V+L+N
Sbjct: 395 CLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLAN 454
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNESKA 544
+ A G+W + N+RK+++ K ++K PG S +E N E ++SK
Sbjct: 455 MYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSSDDSKP 503
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 256/465 (55%), Gaps = 20/465 (4%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
LV Y G + AR +FD++P NV + W V+ S + F + ++L E + N
Sbjct: 235 LVNGYCQAGRMGEARELFDRMPERNV--VAWNVLLSGYV-QFSQVEAAYNLFIEMPEK-N 290
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
+++ ++ G + K ++ V ++M +N V AL+ Y K L+ AR++F
Sbjct: 291 SISWTTMVS---GFVRSGKLQEAKDVLSKMPSDN-VGAKTALMHGYLKSNLIDDARQLFD 346
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ--FTYNAIIASYARRGDS 230
G+ RD V W +MISGY +DEA+VLF++M PN+ ++N +IA A+ G
Sbjct: 347 GIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQM------PNKDMISWNTMIAGCAQGGQI 400
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
A + F +M + V+WN++ISGF Q+ EAL+ F M + T
Sbjct: 401 RKAASIFRKMKRR----NTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACC 456
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A ++QIGR+ H+L+ R G D G+ALI Y+KCG + +AR +F+ ++++
Sbjct: 457 LSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDI 516
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SWNA+I Y +G I +F M +R +E+TL+ VLSACSH GL+++GL F S
Sbjct: 517 VSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNS 576
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M + Y +K EHY C+VD+L R+GR+ EA++L++ + + + GA C +H +
Sbjct: 577 MIKLYSLKPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHE 636
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
+A E+ FE+ K +V+LSNIC G+W +A+ +R +MKE
Sbjct: 637 IAWLAAEKLFELEPCKASNYVLLSNICVEAGKWDDADKVRVLMKE 681
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 197/412 (47%), Gaps = 49/412 (11%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
+V A G + AR +FD++P N N M++A + G ++A G F M N
Sbjct: 48 MVSALAHHGRLAEARRLFDEMPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPAR----N 103
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
+++++I++ V ++ ++ + +M E + N +I Y+K G A +
Sbjct: 104 EYSWTIMVSCYVRAGELTLARE---LLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQ 160
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
M D+VSW S++ G ++ +V F+ M + L ++N ++ Y R GD +
Sbjct: 161 EMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDL----VSWNLMLEGYVRAGDLDV 216
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
A AFFSR+ + P++++W +++G+ Q+ R EA +LF M + NV ++G +Q
Sbjct: 217 ASAFFSRIPS----PNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQ 272
Query: 293 ----------------------AGGLTGSIQIGR--EIHALVCRMGLHIDVFTGSALIDM 328
++G ++ G+ E ++ +M +V +AL+
Sbjct: 273 FSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSD-NVGAKTALMHG 331
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y K + DAR LF+ +++ WN MI Y + GM+D ++ LF++M + M ++
Sbjct: 332 YLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDM----ISW 387
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++++ C+ GG + K IFR MK R V + ++ ++G VEA
Sbjct: 388 NTMIAGCAQGGQIRKAASIFRKMKRRNTVS-----WNSIISGFVQNGLFVEA 434
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 140/317 (44%), Gaps = 47/317 (14%)
Query: 159 SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK------------ 206
++ G L +ARR+F M R+VVS+ +M+S + ++ EA LF+ M
Sbjct: 22 ARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRRNPVSWNTMMV 81
Query: 207 ----------LEGL-----EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
GL N++++ +++ Y R G+ A RM E
Sbjct: 82 ACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCA---AC 138
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
+N MISG+A++ R +A+ L + M I N + G+++ ++ S+Q E+
Sbjct: 139 YNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMP---- 194
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
D+ + + +++ Y + G L A F NV SW ++ Y + G + + E
Sbjct: 195 ----DKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARE 250
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
LF+RM E + A V +LS VE +F M E+ + + +V
Sbjct: 251 LFDRMPERNVVAWNV----LLSGYVQFSQVEAAYNLFIEMPEKNSIS-----WTTMVSGF 301
Query: 432 CRSGRMVEAYDLLRQVP 448
RSG++ EA D+L ++P
Sbjct: 302 VRSGKLQEAKDVLSKMP 318
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
VF + + ++ G L AR LFE +NV S+NAM+ HG + + LF+ M
Sbjct: 11 VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEM-- 68
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
R N V+ +++ ACS G VE +F +M R ++ + +V R+G +
Sbjct: 69 --PRRNPVSWNTMMVACSQHGRVEDARGLFDAMPAR-----NEYSWTIMVSCYVRAGELT 121
Query: 439 EAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEE 478
A +LL ++P + +G +GR + A+ + +E
Sbjct: 122 LARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQE 161
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 18 CLLGKCMKSKALRQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C L L+ G+Q H+LL T ++ S + L+ YA CG + AR VFD++
Sbjct: 455 CCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQ 514
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQ 134
++ N ++ A GN E I F M R ++ T +VL AC GL+D +
Sbjct: 515 DIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLID----EG 570
Query: 135 VHAVATQMGFENDVSVG---NALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYC 190
+H + + + V ++D+ + G L A + GM + + W +++ G C
Sbjct: 571 LHFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALL-GAC 629
Query: 191 NVSKVDEAVVLFERMKLEGLEP 212
V K E + KL LEP
Sbjct: 630 RVHKNHE-IAWLAAEKLFELEP 650
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 78/197 (39%), Gaps = 46/197 (23%)
Query: 215 FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
F N + S AR G AA F M ++V++NAM+S A R EA +LF
Sbjct: 12 FRSNQELTSLARSGQLAAARRLFEEMPRR----NVVSYNAMVSALAHHGRLAEARRLFDE 67
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M + N V+ ++ A C S+ G
Sbjct: 68 M----PRRNPVSWNTMMVA-----------------C------------------SQHGR 88
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
++DAR LF+ +N SW M+ CY + G + + EL +RM E A T+I S
Sbjct: 89 VEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMI---SG 145
Query: 395 CSHGGLVEKGLEIFRSM 411
+ G E + + + M
Sbjct: 146 YAKNGRFEDAIALLQEM 162
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 173/604 (28%), Positives = 285/604 (47%), Gaps = 104/604 (17%)
Query: 29 LRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
+R VH L+ L L + L+ YA G + AR VFD++P+PN+F N ++
Sbjct: 28 VRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLS 87
Query: 87 ASAF-------------------------------TGNFQEAIG-YFSLMREFIYRCNKF 114
A A TG+ ++ Y +L+RE R +
Sbjct: 88 ALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRI 147
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH-- 172
T S ++ L D G VH ++GF VG+ L+DMY+K GL+ ARRVF
Sbjct: 148 TLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM 207
Query: 173 -------------------------GMFE----RDVVSWTSMISGYCNVSKVDEAVVLFE 203
G+F+ RD ++WT+M++G EA+ +F
Sbjct: 208 EAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFR 267
Query: 204 RMKLEGLEPNQFTYNAIIAS-----------------------------------YARRG 228
RM+ EG+ +Q+T+ +I+ + Y++
Sbjct: 268 RMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCR 327
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
A A F RMT ++++W AMI G+ Q+ EA++ F M + GIKP++ T+
Sbjct: 328 SIRLAEAVFRRMTCR----NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLG 383
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
V+ + S++ G + H L GL + +AL+ +Y KCGS++DA LF+
Sbjct: 384 SVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH 443
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+ SW A++ Y + G +I+LFE+ML G++ + VT I VLSACS GLVEKG + F
Sbjct: 444 DQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYF 503
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
SM++ + + +HY C++D+ RSGR EA + ++Q+P + C + G
Sbjct: 504 DSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGN 563
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
++ E E + P +V+L ++ AA G+W E +LR+ M+++ V+K+PG S ++
Sbjct: 564 MEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIK 623
Query: 529 KRNE 532
+N+
Sbjct: 624 YKNK 627
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 149/291 (51%), Gaps = 11/291 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C A +GKQ+HA + + N+F + S LV +Y+ C + A VF ++
Sbjct: 284 ILTACGALAASEEGKQIHAYITRTWYEDNVF-VGSALVDMYSKCRSIRLAEAVFRRMTCR 342
Query: 77 NVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N+ ++W M + N +EA+ FS M+ + + FT V+ +C L +++G Q
Sbjct: 343 NI--ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H +A G ++V NAL+ +Y KCG + A R+F M D VSWT++++GY K
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWN 253
E + LFE+M + GL+P+ T+ ++++ +R G +F M + VP +
Sbjct: 461 AKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYT 520
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
MI +++S R EA + K M S P+ +L + L G+++IG+
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHS---PDAFGWATLLSSCRLRGNMEIGK 568
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 264/527 (50%), Gaps = 62/527 (11%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
A VF++I P + + N M+ + + +AI +++ M + + TF + K+C
Sbjct: 25 AHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCAR 84
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
+ D+++G+ V + ++GFE+ V NALI MY G L A++VF GM ERDVVSW S+
Sbjct: 85 VSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSI 144
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------------------- 217
I GY ++ + + LF M+ + + T
Sbjct: 145 ICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGV 204
Query: 218 -------NAIIASYARRGDSNAAFAFFSRMTAEGFVP----------------------- 247
N +I Y RRG + A F +M + V
Sbjct: 205 VVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNE 264
Query: 248 ----DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
D+++W +MI G++ +K+ EA+KLF+ M+VS +KP+ +TV L A GS+ G
Sbjct: 265 MPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAG 324
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
+H + + + DVF G++LIDMY KCG ++ A +F + ++ SW ++I +
Sbjct: 325 EAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVN 384
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
G +S++ +F++ML+EG+ T + VL AC+H GLV+KG+E F+SM+ Y + +H
Sbjct: 385 GFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKH 444
Query: 424 YACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMG 483
Y CVVD+LCRSG + AY+ ++++P+ + + C +HG LA + ++ +
Sbjct: 445 YGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLD 504
Query: 484 LRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+V+ S+ A W + +RK+M+ N+QK +S +E R
Sbjct: 505 PSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEVR 551
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 164/526 (31%), Positives = 274/526 (52%), Gaps = 38/526 (7%)
Query: 42 NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTG--NFQEAIG 99
N ++ L + L+ Y G A +FD++P+ +V + W M + +T + A
Sbjct: 36 NPKDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDV--IAWTSMITGYTSCNHHSRAWN 93
Query: 100 YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE-NDVSVGNALIDMY 158
F+ M + N FT S VLKAC L + GK VH +A ++G + + + V NAL+DMY
Sbjct: 94 VFTNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMY 153
Query: 159 SK-CGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
+ C + +AR VF + ++ VSWT++I+GY + + +F +M +E E + F++
Sbjct: 154 ATCCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSF 213
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGF---VP--------------------------- 247
+ +++ A G SN + + GF +P
Sbjct: 214 SIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQ 273
Query: 248 -DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
D +TWN +I+GF ++ E+L +F M+ G PN T T V+ A + G+++
Sbjct: 274 KDTITWNTLIAGF-ETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQL 332
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H + GL ++ +ALIDMY+KCG++ D+ +F R N+ SW +M+ YG HG
Sbjct: 333 HGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHG 392
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
+++LF M+ G++ +++ ++VLSACSH GLV++GL FR M Y V ++ YAC
Sbjct: 393 KEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYAC 452
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
VVD+L R+GR+ EAY+L+ +P S+ A C + + + + EM K
Sbjct: 453 VVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNK 512
Query: 487 PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+V+LSN AA+G W + +LRK+M+ +K+ G S +E +N+
Sbjct: 513 AGTYVLLSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQ 558
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 187/389 (48%), Gaps = 53/389 (13%)
Query: 19 LLGKCMKSKALRQGKQVHAL---LCTNDLNIFSLKSKLVGVYAGCGD-VNSARLVFDKIP 74
+L C KAL GK VH L + T +I+ + + L+ +YA C D +++ARLVF+ I
Sbjct: 113 VLKACKSLKALLCGKLVHGLAIKIGTQGSSIY-VDNALMDMYATCCDSMDNARLVFEDIG 171
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR---CNKFTFSIVLKACVGLLDIKK 131
N ++W + + +T + ++A G + R+ + F+FSI + AC +
Sbjct: 172 TKNA--VSWTTLITGYT-HRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNL 228
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
GKQVHA GFE+++ V NA++DMY +C A+++F M ++D ++W ++I+G+
Sbjct: 229 GKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFET 288
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS---------------------------- 223
+ E++ +F +M EG PN FT+ ++IA+
Sbjct: 289 LDSY-ESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLEL 347
Query: 224 -------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
YA+ G+ + FS M +LV+W +M+ G+ EA+ LF M+
Sbjct: 348 SNALIDMYAKCGNVADSHKIFSGMRHT----NLVSWTSMMIGYGAHGHGKEAVDLFNEMV 403
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
SGIKP+ + VL A G + G R + + D + ++D+ S+ G +
Sbjct: 404 GSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRV 463
Query: 336 KDARTLFEITRIKNVAS-WNAMIGCYGKH 363
K+A L E K S W A++G K+
Sbjct: 464 KEAYELIENMPFKPDESIWVALLGACKKY 492
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 165/492 (33%), Positives = 252/492 (51%), Gaps = 62/492 (12%)
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC----------- 111
V A VF ++ +PN+ + N M+ A A ++A+ + M RC
Sbjct: 62 VTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRM----LRCPTSPPDGHAGG 117
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
++FT+ +LKAC G ++ GKQVH + G ++ V N+LI+MY++ G L A +VF
Sbjct: 118 DRFTYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVF 177
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M ERDVVSW N +I+++AR G
Sbjct: 178 DEMRERDVVSW-----------------------------------NMLISAHARLGQMR 202
Query: 232 AAFAFFSRMTAEGFVPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
A A F+ M PD +VTW AM+SG+ A+ F+ M G +P++V++
Sbjct: 203 KATALFNSM------PDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVA 256
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
VL A G++++GR I+A R G+ +AL++MY+KCG + A LF+ K+
Sbjct: 257 VLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKD 316
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKGLEIF 408
V SW+ +IG HG ++ LF M +EG +R N +T + +LSACS+ GLV++GL F
Sbjct: 317 VISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHF 376
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
M + YGV+ EHY CVVD+L RSG++ A DL+R +P+ + G+ + C HG
Sbjct: 377 DRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGD 436
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
D AV E E+ VML+N+ AA W + + RK ++ ++++K PG S +E
Sbjct: 437 VDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLIE 496
Query: 529 KRN---EFVEKE 537
N EFV E
Sbjct: 497 VGNVVREFVAGE 508
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 38/307 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPN-- 75
LL C + AL GKQVH + + + ++ ++ L+ +Y GD+ A VFD++
Sbjct: 125 LLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERD 184
Query: 76 ---------------------------PNVFMLNWMVMASAFT--GNFQEAIGYFSLMRE 106
P+ ++ W M S +T G++ A+ F M+
Sbjct: 185 VVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQT 244
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
+ + + VL AC L ++ G+ ++A + G + NAL++MY+KCG +
Sbjct: 245 EGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQ 304
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG-LEPNQFTYNAIIASYA 225
A ++F GM ++DV+SW+++I G + EAV LF M+ EG + PN T+ ++++ +
Sbjct: 305 ALQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACS 364
Query: 226 RRGDSNAAFAFFSRMT-AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
G + + F RM G P + + ++ +S + AL L + M V P +
Sbjct: 365 YAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPV----PAD 420
Query: 285 VTVTGVL 291
V G L
Sbjct: 421 AKVWGSL 427
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + AL G+ ++A C L + + L+ +YA CG ++ A +FD + +
Sbjct: 257 VLPACAQLGALELGRWIYAY-CKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADK 315
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLM-REFIYRCNKFTFSIVLKAC--VGLLDIKKGK 133
+V + ++ A G EA+ F+ M +E R N TF +L AC GL+D +
Sbjct: 316 DVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVD-EGLS 374
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+ G E V ++D+ + G + A + M D W S++S +
Sbjct: 375 HFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSH 434
Query: 193 SKVDEAVVLFERMKLEGLEPNQ 214
VD AV+ ER L LEP+
Sbjct: 435 GDVDTAVLAAER--LVELEPDD 454
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 266/518 (51%), Gaps = 30/518 (5%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
S+ L+ ++A GD+ + R VFD + V + ++ A +G EA+ F M E
Sbjct: 190 SVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLEN 249
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG---LL 164
++ +++T S +L AC L + G+Q+H++A ++G E+D V L+DMY+K L
Sbjct: 250 GFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSL 309
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV-VLFERMKLEGLEPNQFTYNAIIAS 223
+AR VF+ M + +V++WT+++SGY D V +LF +M EG+ PN TY++++ +
Sbjct: 310 HNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKA 369
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA-----------LKLF 272
A GD ++ + V NA++S +A+S EA + F
Sbjct: 370 CANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSF 429
Query: 273 KGMLVSGIKPNNV---------------TVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
G L + N T ++ A G + G+ +HAL + G
Sbjct: 430 SGNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGS 489
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
D G++L+ MYS+CG L DA +F+ NV SW +MI KHG ++ELF M+
Sbjct: 490 DRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMI 549
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
G++ N+VT I+VLSACSH GLV++G E FR M++ +G+ EHYAC+VD+L RSG +
Sbjct: 550 AAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLV 609
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
+A D + ++P V + C H D+ ++ + P +V+LSN+
Sbjct: 610 EDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLY 669
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
A G W + +R +M++KN+ K+ G S + N E
Sbjct: 670 AEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHE 707
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 257/547 (46%), Gaps = 67/547 (12%)
Query: 17 DCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
D LG+ ++ LR G +LL T+ + + + L+ +Y+ C V +AR VFD +P
Sbjct: 62 DIHLGRALQGHLLRTG----SLLETDAV----VANSLLTLYSKCSAVAAARSVFDGMPVG 113
Query: 77 NVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG--LLDIKKG 132
+++W MAS + G EA+ F E N FT +AC L + G
Sbjct: 114 LRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGG 173
Query: 133 KQVHAVATQMGF-ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
V + ++GF DVSVG ALIDM++K G L + RRVF G+FER VV WT +I+ Y
Sbjct: 174 A-VLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQ 232
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS---------------------------- 223
DEAV LF M G +P+Q+T ++++++
Sbjct: 233 SGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCV 292
Query: 224 -------YARRGDSNA---AFAFFSRMTAEGFVPDLVTWNAMISGFAQ-SKRENEALKLF 272
YA+ + + A F+RM +++ W A++SG+ Q ++N+ + LF
Sbjct: 293 SCGLVDMYAKSHNGQSLHNAREVFNRMPKH----NVMAWTALLSGYVQRGSQDNQVMILF 348
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
ML GI+PN++T + +L+A G GR+IH + L G+AL+ MY++
Sbjct: 349 CKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAES 408
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV-DSSIELFERMLEEGMRANEVTLISV 391
GS+++AR F+ KN+ S++ + G+ D IE E + + T S+
Sbjct: 409 GSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERME------LGISTFTFGSL 462
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
+SA + G++ KG + ++ + G + +V M R G +V+A + ++ +
Sbjct: 463 ISAAASVGMLTKG-QRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHN 521
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENLR 510
S +G HG A+ + + G++ D ++ + + C+ G E +
Sbjct: 522 VISWTSMI-SGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHF 580
Query: 511 KIMKEKN 517
++M++ +
Sbjct: 581 RMMQKHH 587
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 190/402 (47%), Gaps = 67/402 (16%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKS-KLVGVYAGCGD---VNSARLVFD 71
L +L C + + R G+Q+H+L L S S LV +YA + +++AR VF+
Sbjct: 258 LSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFN 317
Query: 72 KIPNPNVFMLNWMVMASAF----TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
++P NV + W + S + + + Q I + ++ E I R N T+S +LKAC L
Sbjct: 318 RMPKHNV--MAWTALLSGYVQRGSQDNQVMILFCKMLNEGI-RPNHITYSSMLKACANLG 374
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D G+Q+H + + VGNAL+ MY++ G + AR F ++E+++VS++ +
Sbjct: 375 DQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLD 434
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR--------------------- 226
G + + + ERM+L G+ + FT+ ++I++ A
Sbjct: 435 GDGRSNTYQDYQI--ERMEL-GI--STFTFGSLISAAASVGMLTKGQRLHALSLKAGFGS 489
Query: 227 -RGDSNAAFAFFSRMTAEGFVPD------------LVTWNAMISGFAQSKRENEALKLFK 273
R N+ + +SR G++ D +++W +MISG A+ AL+LF
Sbjct: 490 DRAIGNSLVSMYSRC---GYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFH 546
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE-------IHALVCRMGLHIDVFTGSALI 326
M+ +G+KPN+VT VL A G ++ G+E H L+ RM + + ++
Sbjct: 547 DMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHY------ACMV 600
Query: 327 DMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVD 367
D+ + G ++DA E+ + W ++G H +D
Sbjct: 601 DLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMD 642
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 167/511 (32%), Positives = 269/511 (52%), Gaps = 49/511 (9%)
Query: 25 KSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNS---ARLVFDKIPNPNVFM 80
K + Q KQ+ + L T L +K++ ++A +S A +F + N + F+
Sbjct: 20 KGLTISQLKQIQSHLTVTATLKDPYAAAKIISLHAHSNARSSLFYAERLFLCLQNKSTFI 79
Query: 81 LNWMVMASAFTGNFQEAIGYFSLMREFI---YRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
W M AF EA+ FSL + + Y N FTFS V++AC+ + +++ G H
Sbjct: 80 --WNTMMQAFVEK-NEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFNLQMGLCFHG 136
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ G+E+ V N LI +Y+ CG + AR +F +RDVV+WT +ISGY N +
Sbjct: 137 QVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCLISGYLNSGQ--- 193
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
VL R F RM + + V+W A+I+
Sbjct: 194 --VLIAR------------------------------ELFDRMPEK----NPVSWGALIA 217
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
G+ + EAL++F M VSG + N ++ G L A G++ GR IHA V R + +
Sbjct: 218 GYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALTACAFLGALDQGRWIHAYVKRHHMSL 277
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
D G+ALIDMY+KCG ++ A ++F+ ++V ++ +I H +++I+LF RM
Sbjct: 278 DRMLGTALIDMYAKCGCIEMACSVFDEMDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQ 337
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
+EG+ NEVT + VL+ACS G+V++GL IF SM RY ++ +HY C+VD+L R+G++
Sbjct: 338 DEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSNRYVIEPQIQHYGCLVDLLGRAGKI 397
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
EA ++R++P+ + GA + C +HG L M + + L V+LSN+
Sbjct: 398 EEAKQVVREMPLQPDSYTLGALLDACRVHGDVQLGEEMVDSLVQRCLDHGGVHVLLSNMY 457
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
A+ +W +A +RK M++KN++K PG S +E
Sbjct: 458 ASADKWEDASKIRKKMEDKNIRKLPGCSSIE 488
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C AL QG+ +HA + + +++ L + L+ +YA CG + A VFD++ + +V
Sbjct: 251 LTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDRDV 310
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV-HA 137
+ ++ A + AI F+ M++ N+ TF VL AC + + +G ++ +
Sbjct: 311 YAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFES 370
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
++ + E + L+D+ + G + A++V M
Sbjct: 371 MSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREM 407
>gi|357118276|ref|XP_003560882.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 508
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 163/504 (32%), Positives = 264/504 (52%), Gaps = 11/504 (2%)
Query: 30 RQGKQVHALLCTNDLN--IFSLKSKLVGVYAGC-GDVNSARLVFDKIPNPNVFMLNWMVM 86
R KQ+H L + + L+ L+ A G ++ AR VFD I +P++FM N MV
Sbjct: 11 RSLKQIHGNLVVKGITSRLQPLRELLLACVASFNGGMDYARKVFDGISHPDLFMHNVMVR 70
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
A + A + + + + FTF +L+AC GL G QVH ++G+
Sbjct: 71 GYAHSAAPAAAFVLYRRIEAARLKPDSFTFCYLLRACAGLPGSCAGYQVHGAVVKLGYFK 130
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D V NALI+M++KCG L A + ERDVV+ +++I+G+ ++D A LF+ +
Sbjct: 131 DAFVRNALINMHAKCGDLLVAGTLLDEAGERDVVARSAVIAGHAAKGELDIARQLFDECQ 190
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
+ L +N ++A+YA+ G+ A R + D+V+WN +I+G+
Sbjct: 191 HKDL----VCWNVMVAAYAKYGEMEKARGLLDRAPEK----DVVSWNTIITGYTAKGLLK 242
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
EAL++ M G+ P+ T+ +L GS+ GR IH+L I + G+AL+
Sbjct: 243 EALEVLDEMRCVGLMPDEATIVSLLSCCANLGSLGTGRMIHSLHLEGRPCISILPGNALV 302
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
MY+KCG ++ A +F + ++V +WN++IG HG + S++ F +ML+EG+ NE+
Sbjct: 303 SMYAKCGDVQAAMEVFSRMKERDVWTWNSIIGGLAFHGQAEQSVQFFNKMLDEGLCPNEI 362
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
+ + VL ACSH GLVE G F M RY ++ + HY+C+VDML RSG + EA+ ++
Sbjct: 363 SFLCVLGACSHAGLVEDGQRYFSLMINRYRIEPNARHYSCIVDMLGRSGLLDEAFAIVSS 422
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
+ + C IHG L E +M +V+LS I A+ EW
Sbjct: 423 MRCEPAVVIWRTLLGACRIHGDVALGKLARERLLKMNEDASGDYVLLSGIYASCDEWFGV 482
Query: 507 ENLRKIMKEKNVQKQPGFSRVEKR 530
E +R M E+ ++K G+++VE++
Sbjct: 483 ETVRGSMDERGIRKVAGYAQVEQK 506
>gi|357521772|ref|XP_003612377.1| Selenium binding protein-like protein [Medicago truncatula]
gi|355513712|gb|AES95335.1| Selenium binding protein-like protein [Medicago truncatula]
Length = 611
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 181/567 (31%), Positives = 275/567 (48%), Gaps = 57/567 (10%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGD------VNSAR 67
N + LL KC K L Q K HAL+ T I + L + C D N A
Sbjct: 5 NTILSLLPKC---KTLLQFKTSHALILTTPTTINTKIIPLSKLIDFCVDSHFDEYFNYAN 61
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
L+F +I +PNV++ N M+ A + N ++ + M + Y + FTF VLKAC +
Sbjct: 62 LLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSFIY 121
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D GK VH+ + GFE +V V L++MY +C + S +VF + + +VV+WT +I+
Sbjct: 122 DQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLIN 181
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------------ 217
GY + EA+ +F+ M G+E N+ T
Sbjct: 182 GYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDP 241
Query: 218 ------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
AI+ YA+ G N A F++M ++V WN MI+ + Q +R
Sbjct: 242 FVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPER----NIVAWNCMINAYNQYERY 297
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
NEAL LF ML +G P+ T VL + +G +HA + + + D+ +AL
Sbjct: 298 NEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATAL 357
Query: 326 IDMYSKCGSLKDARTLFEIT-RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRA 383
+DMY+K G L A+ +F + K+V W +MI HG + ++ LF+ M E+ +
Sbjct: 358 LDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVP 417
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
+ +T I VL ACSH GLVE+ + F M + YG+ KEHY+C+VD+L R+G EA L
Sbjct: 418 DHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHFREAEKL 477
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ + + ++ GA NGC IH +A + E+ + + +LSNI A G+W
Sbjct: 478 METMSIRPNIAIWGALLNGCQIHENIPVASQVKVRLAELEPIQSGIYALLSNIYANSGKW 537
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVEKR 530
E RK+MK K + K G S VE +
Sbjct: 538 EEVNRTRKMMKHKRIAKTIGHSSVEMK 564
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 163/540 (30%), Positives = 272/540 (50%), Gaps = 44/540 (8%)
Query: 27 KALRQGKQVHALL----CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
K G VHAL+ +DL + S L+ Y V AR VF+++ +V ++
Sbjct: 136 KGRATGDAVHALVQRIGFASDLFVMS---GLINFYGASKSVEDARKVFEEMHERDV--VS 190
Query: 83 WMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVAT 140
W +M SAF G + + M+ + NK T +L AC + + KG V+A
Sbjct: 191 WTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVD 250
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ G E DV + NALI MY KCG + A + F GM R+ SW ++I G+ K EA+
Sbjct: 251 EYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALT 310
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGD----------------------SNAAFAFFS 238
+FE M +G+ P+ T +++++YA+ GD N+ ++
Sbjct: 311 MFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYA 370
Query: 239 R---MTAEGFV------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+ M A + D+V+W AM+ G+ + + A LF M V + + + +
Sbjct: 371 KCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVS 430
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
+L A G++ GREIH+ + + D++ SAL+DMY+KCG + A +F R K
Sbjct: 431 LLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQ 490
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+WNAMIG G ++ LFE++L+ + + +TL VL AC+H G+V++GL F
Sbjct: 491 TLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYF 550
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
M G+ EHY C+VD+L R+G + EAY+ ++++P+ + G+ C +H R
Sbjct: 551 NLMLT-LGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHR 609
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+L +G+ ++ V++SN+ A +G+W + E +R +M + V+K PG S ++
Sbjct: 610 MELGKIIGQHIIDLAPNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHSSIQ 669
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 152/305 (49%), Gaps = 12/305 (3%)
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++AS R D A F RM P + WN MI G+ +AL+LF+ M SG
Sbjct: 59 LLASPVSRHDMPYARKVFDRMAQ----PTAIVWNCMIRGYNSCHAPMDALELFRAMRRSG 114
Query: 280 IKPNNVTVTGVLQAGGLTGSIQ---IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+ P+N T+ V Q+ S + G +HALV R+G D+F S LI+ Y S++
Sbjct: 115 VSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVE 174
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
DAR +FE ++V SW MI + + G D+ + + M EG + N++T+IS+LSAC
Sbjct: 175 DARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACG 234
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
V+KGL ++ + E YG++ + ++ M + G M +A+ + +P+ T S
Sbjct: 235 QVRAVDKGLWVYARVDE-YGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSW- 292
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC--AADGEWHEAENLRKIMK 514
+G +G+ A+TM EE G+ PD ++S + A G+ + L +K
Sbjct: 293 NTLIDGFVQNGKHKEALTMFEEMLSDGV-IPDVITLVSVLSTYAQLGDLQQGRYLHNYIK 351
Query: 515 EKNVQ 519
+ +
Sbjct: 352 DHEIH 356
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 169/399 (42%), Gaps = 59/399 (14%)
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAI------ 220
AR+VF M + + W MI GY + +A+ LF M+ G+ P+ +T A+
Sbjct: 72 ARKVFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAA 131
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDL------------------------------- 249
AS+ R +A A R+ GF DL
Sbjct: 132 FASWKGRATGDAVHALVQRI---GFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDV 188
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
V+W MIS FAQ + + L+ M G KPN +T+ +L A G ++ G ++A
Sbjct: 189 VSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYAR 248
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
V G+ DV +ALI MY KCG + DA F+ I+N SWN +I + ++G +
Sbjct: 249 VDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEA 308
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+ +FE ML +G+ + +TL+SVLS + G +++G + +K+ + + +++
Sbjct: 309 LTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKD-HEIHCDIILQNSLIN 367
Query: 430 MLCRSGRMVEA---------YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF 480
M + G M A D++ M FR N+ + M E
Sbjct: 368 MYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEM- 426
Query: 481 EMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
V L + C+ G + + +KEK+V+
Sbjct: 427 --------ALVSLLSACSQLGALDKGREIHSYIKEKSVR 457
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 171/574 (29%), Positives = 285/574 (49%), Gaps = 65/574 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C K A +G QVH ++ L ++F S L+ YA CG V+ R VFD++
Sbjct: 128 LLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANS-LIHFYAACGKVDLGRKVFDEMLER 186
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV ++ + +EA+ F M E N T + AC L D++ GK+V
Sbjct: 187 NVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVC 246
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ T++G +++ V NAL+DMY KCG + + R +F ++++V + +++S Y
Sbjct: 247 NLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAG 306
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
E +V+ + M +G P++ T NAII
Sbjct: 307 EVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAII 366
Query: 222 ASYARRGDSNAAFAFFSRMTAE----------GFVPD-----------------LVTWNA 254
Y + G AA F M+ + G V D LV+WN
Sbjct: 367 DMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNT 426
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MI Q+ EA+ L + M GIK + VT+ G+ A G G++ + + I+ + +
Sbjct: 427 MIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKND 486
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+HID+ G+AL+DM+S+CG +A +FE ++V++W A I G +IELF+
Sbjct: 487 IHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFD 546
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
ML++ ++A++ +++L+A SHGG V++G ++F +M++ +GV HY C+VD+L R+
Sbjct: 547 EMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRA 606
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
G + EA+DL++ +P+ + + G+F C H + A E+ ++ K V+LS
Sbjct: 607 GLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLS 666
Query: 495 NICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
NI A+ G+W++ +R MKEK QK G S +E
Sbjct: 667 NIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIE 700
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 215/489 (43%), Gaps = 74/489 (15%)
Query: 77 NVFMLNWMVMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+++ N ++ A +G +EAI Y ++ + FTF +L AC ++ +G QV
Sbjct: 85 SLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQV 144
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H V +MG D+ V N+LI Y+ CG + R+VF M ER+VVSWTS+I+GY V+
Sbjct: 145 HGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMA 204
Query: 196 DEAVVLFERMKLEGLEPNQFT-----------------------------------YNAI 220
EAV LF M G+EPN T NA+
Sbjct: 205 KEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNAL 264
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
+ Y + GD A F + + +LV +N ++S + Q E L + ML G
Sbjct: 265 LDMYMKCGDMYAVREIFDEFSDK----NLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQ 320
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+P+ VT+ + A G + +G+ HA V R GL +A+IDMY KCG + A
Sbjct: 321 RPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACK 380
Query: 341 LFEITRIK-------------------------------NVASWNAMIGCYGKHGMVDSS 369
+F+ K N+ SWN MIG + M + +
Sbjct: 381 VFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEA 440
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
I+L M +G++ + VT++ + SAC + G ++ I+ + E+ + I + +VD
Sbjct: 441 IDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYI-EKNDIHIDMQLGTALVD 499
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
M R G + A + + ++ A R + G A+ + +E + + K D
Sbjct: 500 MFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKA-VEGNAKGAIELFDEMLKQDV-KADD 557
Query: 490 FVMLSNICA 498
FV ++ + A
Sbjct: 558 FVFVALLTA 566
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 270/524 (51%), Gaps = 29/524 (5%)
Query: 27 KALRQGKQVHALLC-TNDLNIFSLKSKLVGVYA-GCGDVNSARLVFDKIPNPNVFMLNWM 84
K R KQ+HA+ T + ++++ A D++ AR VF ++P PN F N +
Sbjct: 30 KTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTI 89
Query: 85 VMASAFTGNFQ---EAIGYFSLMR-EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVAT 140
+ A T + EA+ FS M + + N+FTF VLKAC +++GKQ+H +
Sbjct: 90 LRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIV 149
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
+ GF D V + L+ MY C ++ A + +F ++VV + G C +
Sbjct: 150 KFGFHEDEFVISNLVRMYVMCAVMEDA----YSLFCKNVVDF----DGSCQME------- 194
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
++ K +G N +N +I R GD +A F M +V+WN MISG+A
Sbjct: 195 -LDKRKQDG---NVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRS----VVSWNVMISGYA 246
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q+ EA+ LF+ M S I PN VT+ VL A G++++G+ IH + + ID
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDV 306
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
GSAL+DMYSKCGS+ A +FE +N +W+A+IG + HG + +I F M + G
Sbjct: 307 LGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAG 366
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ N+V I +LSACSH GLVE+G F M + G++ EHY C+VD+L R+G + EA
Sbjct: 367 VTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEA 426
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
+L+R +P+ + + A C +H + + E E+ +V LSN+ A+
Sbjct: 427 EELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASL 486
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNESKA 544
G W +R MK +++K PG S +E E V+++S +
Sbjct: 487 GNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHS 530
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 167/522 (31%), Positives = 267/522 (51%), Gaps = 44/522 (8%)
Query: 38 LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEA 97
L T D+ F+++ +G A G++ +AR VFD++P+ + N ++ G F E+
Sbjct: 41 LFSTQDVYAFNVQ---IGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNGCFDES 97
Query: 98 IGYFSLMREFIYRCNKFTFSIVLKACV----------------------------GLLDI 129
F LM N +++ ++ C+ GL+
Sbjct: 98 KRLFGLM----PTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRY 153
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
+ ++ + +M N +S A++D Y+K G + AR +F+ M +++VVSWT MISGY
Sbjct: 154 DRVEEASRLFEEMPRRNVISY-TAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGY 212
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL 249
K DEA LFE+M + N A+I Y + G ++ A F ++ DL
Sbjct: 213 VENGKFDEAENLFEQMP----DKNIVAMTAMITGYCKEGKTDKAKILFDQIPCR----DL 264
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
+WNAMI+G+AQ+ EALKL ML G++P++ T+ VL A S+Q GR+ H L
Sbjct: 265 ASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVL 324
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
V + G + +ALI MY KCGS+ D+ F +V SWNAMI + +HG D +
Sbjct: 325 VLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRA 384
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+ F M + + +T +S+LSAC H G V + L F SM Y + EH+AC+VD
Sbjct: 385 LASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIXSYKIVXRPEHFACLVD 444
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
+L R G++ +AY +++++P + GA C++H L ++ E+ +
Sbjct: 445 ILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGA 504
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+V+LSNI AA G W E +R +M+E+ V+KQP +S +E N
Sbjct: 505 YVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDN 546
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 195/413 (47%), Gaps = 58/413 (14%)
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
+Q H ++ ++ DV N I ++ G + +AR+VF M RD VSW S+I+GY
Sbjct: 31 NRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWK 90
Query: 192 VSKVDEAVVLFERMKLEGLEP--NQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL 249
DE+ LF GL P N ++N++IA + A+ +F M +
Sbjct: 91 NGCFDESKRLF------GLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQR----NT 140
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG-------------- 295
+WNAMISG + R EA +LF+ M + V G + G
Sbjct: 141 ASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQK 200
Query: 296 --------LTGSIQIGR--EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
++G ++ G+ E L +M ++ +A+I Y K G A+ LF+
Sbjct: 201 NVVSWTVMISGYVENGKFDEAENLFEQMP-DKNIVAMTAMITGYCKEGKTDKAKILFDQI 259
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
+++ASWNAMI Y ++G + +++L +ML+ GM+ + TLISVL+ACS +++G
Sbjct: 260 PCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGR 319
Query: 406 EIF-RSMKERYGVKISKEHYAC--VVDMLCRSGRMVEAYDLLRQV--PMYVT-NSMAGAF 459
+ +K Y +IS C ++ M C+ G ++++ RQ+ P V+ N+M AF
Sbjct: 320 KTHVLVLKSGYESRIS----ICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAF 375
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRK--PDGFVMLS--NICAADGEWHEAEN 508
HG D A+ F EM + PDG LS + C G+ HE+ N
Sbjct: 376 AR----HGFYDRALA---SFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLN 421
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/492 (33%), Positives = 252/492 (51%), Gaps = 62/492 (12%)
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC----------- 111
V A VF ++ +PN+ + N M+ A A ++A+ + M RC
Sbjct: 62 VTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRM----LRCPTSPPDGHAGG 117
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
++FT+ +LKAC G ++ GKQVH + G ++ V N+LI+MY++ G L A +VF
Sbjct: 118 DRFTYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVF 177
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M ERDVVSW N +I+++AR G
Sbjct: 178 DEMRERDVVSW-----------------------------------NMLISAHARLGQMR 202
Query: 232 AAFAFFSRMTAEGFVPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
A A F+ M PD +VTW AM+SG+ A+ F+ M G +P++V++
Sbjct: 203 KATALFNSM------PDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVA 256
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
VL A G++++GR I+A R G+ +AL++MY+KCG + A LF+ K+
Sbjct: 257 VLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKD 316
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKGLEIF 408
V SW+ +IG HG ++ LF M +EG +R N +T + +LSACS+ GLV++GL F
Sbjct: 317 VISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHF 376
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
M + YGV+ EHY CVVD+L RSG++ A DL+R +P+ + G+ + C HG
Sbjct: 377 DRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGD 436
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
D AV E E+ VML+N+ AA W + + RK ++ ++++K PG S +E
Sbjct: 437 VDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLIE 496
Query: 529 KRN---EFVEKE 537
N EFV E
Sbjct: 497 VGNVVREFVAGE 508
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 38/307 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPN-- 75
LL C + AL GKQVH + + + ++ ++ L+ +Y GD+ A VFD++
Sbjct: 125 LLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERD 184
Query: 76 ---------------------------PNVFMLNWMVMASAFT--GNFQEAIGYFSLMRE 106
P+ ++ W M S +T G++ A+ F M+
Sbjct: 185 VVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQT 244
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
+ + + VL AC L ++ G+ ++A + G + NAL++MY+KCG +
Sbjct: 245 EGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQ 304
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG-LEPNQFTYNAIIASYA 225
A ++F GM ++DV+SW+++I G + EAV LF M+ EG + PN T+ ++++ +
Sbjct: 305 ALQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACS 364
Query: 226 RRGDSNAAFAFFSRMT-AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
G + + F RM G P + + ++ +S + AL L + M V P +
Sbjct: 365 YAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPV----PAD 420
Query: 285 VTVTGVL 291
V G L
Sbjct: 421 AKVWGSL 427
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + AL G+ ++A C L + + L+ +YA CG ++ A +FD + +
Sbjct: 257 VLPACAQLGALELGRWIYAY-CKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADK 315
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLM-REFIYRCNKFTFSIVLKAC--VGLLDIKKGK 133
+V + ++ A G EA+ F+ M +E R N TF +L AC GL+D +
Sbjct: 316 DVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVD-EGLS 374
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+ G E V ++D+ + G + A + M D W S++S +
Sbjct: 375 HFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSH 434
Query: 193 SKVDEAVVLFERMKLEGLEPNQ 214
VD AV+ ER L LEP+
Sbjct: 435 GDVDTAVLAAER--LVELEPDD 454
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 259/507 (51%), Gaps = 44/507 (8%)
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
++ AR +FDKIP PN N M G+ ++ + F + N FTF +++K+
Sbjct: 60 IHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKS 119
Query: 123 CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSK---------------------- 160
C L +++G++VH AT+ GF+++ V +LIDMYSK
Sbjct: 120 CGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVW 179
Query: 161 ---------CGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
CG + S RR+F ERDVV W+ +ISGY + A LF++M
Sbjct: 180 TAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKM------ 233
Query: 212 PNQFT--YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
PN+ T +NA++ YA G+ F M ++ +WN +I G+ ++ +E L
Sbjct: 234 PNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPER----NVFSWNGLIGGYVKNGLFSETL 289
Query: 270 KLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
+ FK MLV G + PN+ T+ VL A G++ +G+ +H +G ++F G+ LIDM
Sbjct: 290 ESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDM 349
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y+KCG +++A +F K++ SWN +I HG ++ +F+RM EG + VT
Sbjct: 350 YAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTF 409
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ +LSAC+H GLV+ G F+SM + Y + EHY C+VD+L R+G + +A + +R++P
Sbjct: 410 VGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMP 469
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
+ + A C ++ ++A + E+ P FVM+SNI G +
Sbjct: 470 IEPDAVIWAALLGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVAR 529
Query: 509 LRKIMKEKNVQKQPGFSRVEKRNEFVE 535
L+ M++ +K PG S +E + VE
Sbjct: 530 LKIAMRDTGFRKLPGCSVIECNDSVVE 556
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 128/249 (51%), Gaps = 5/249 (2%)
Query: 57 YAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS-LMREFIYRCNKFT 115
YA G+V VFD++P NVF N ++ G F E + F ++ E N FT
Sbjct: 248 YAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFT 307
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
VL AC L + GK VH A +G++ ++ VGN LIDMY+KCG++ +A VF+ +
Sbjct: 308 LVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLD 367
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
+D++SW ++I+G +A+ +F+RMK EG EP+ T+ I+++ G F
Sbjct: 368 RKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFL 427
Query: 236 FFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
+F M VP + + M+ ++ ++AL + M I+P+ V +L A
Sbjct: 428 YFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKM---PIEPDAVIWAALLGAC 484
Query: 295 GLTGSIQIG 303
L +++I
Sbjct: 485 RLYKNVEIA 493
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 187/427 (43%), Gaps = 62/427 (14%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
F +L++C + ++ Q+ A G E++ V I S+ + AR++F +
Sbjct: 15 FITLLRSCK---NYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIP 71
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERM--------------------KLEGL----- 210
+ + +W +M GY + VVLF + KLEG+
Sbjct: 72 QPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEE 131
Query: 211 ----------EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
+ N F ++I Y+++G A+ F M ++V W A+I+G+
Sbjct: 132 VHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHER----NVVVWTAIINGYI 187
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
+LF + +V ++G +++ + + ++ ++ + D
Sbjct: 188 LCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMP--------NRDTM 239
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
+ +A+++ Y+ G ++ +F+ +NV SWN +IG Y K+G+ ++E F+RML EG
Sbjct: 240 SWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEG 299
Query: 381 -MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM-- 437
+ N+ TL++VLSACS G ++ G + E G K + ++DM + G +
Sbjct: 300 HVIPNDFTLVAVLSACSRLGALDMG-KWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIEN 358
Query: 438 -VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLS 494
V ++ L + + N++ NG IHG A+ M + G +PDG FV +
Sbjct: 359 AVVVFNCLDRKDIISWNTII----NGLAIHGHAPDALGMFDRMKSEG-EEPDGVTFVGIL 413
Query: 495 NICAADG 501
+ C G
Sbjct: 414 SACTHMG 420
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 163/399 (40%), Gaps = 51/399 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C K + +R+G++VH + S + + L+ +Y+ G V A VF ++ N
Sbjct: 116 IIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERN 175
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V + ++ G+ F L E + +S+++ G ++ K
Sbjct: 176 VVVWTAIINGYILCGDVVSGRRLFDLAPER----DVVMWSVLIS---GYIESKNMAAARE 228
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ +M D NA+++ Y+ G + +VF M ER+V SW +I GY E
Sbjct: 229 LFDKMP-NRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSE 287
Query: 198 AVVLFERMKLEG-LEPNQFTY-----------------------------------NAII 221
+ F+RM +EG + PN FT N +I
Sbjct: 288 TLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLI 347
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ G A F+ + + D+++WN +I+G A +AL +F M G +
Sbjct: 348 DMYAKCGVIENAVVVFNCLDRK----DIISWNTIINGLAIHGHAPDALGMFDRMKSEGEE 403
Query: 282 PNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P+ VT G+L A G ++ G ++V + + ++D+ + G L A
Sbjct: 404 PDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALN 463
Query: 341 LFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLE 378
I+ + W A++G + V+ + +R++E
Sbjct: 464 FIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIE 502
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L +L C + AL GK VH + N+F + + L+ +YA CG + +A +VF+ +
Sbjct: 308 LVAVLSACSRLGALDMGKWVHVYAESIGYKGNLF-VGNVLIDMYAKCGVIENAVVVFNCL 366
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG- 132
++ N ++ A G+ +A+G F M+ + TF +L AC + +K G
Sbjct: 367 DRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGF 426
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
++ + ++D+ + GLL A M E D V W +++ G C
Sbjct: 427 LYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALL-GACR 485
Query: 192 VSK-VDEAVVLFERMKLEGLEPN 213
+ K V+ A + +R L LEPN
Sbjct: 486 LYKNVEIAELALQR--LIELEPN 506
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/587 (28%), Positives = 285/587 (48%), Gaps = 108/587 (18%)
Query: 50 KSKLVGVYAGCGDVNSARLVFDKIPNP--NVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
++ +V Y GD+ AR VF++ P + M N M+ + + AI F M+
Sbjct: 83 RTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKG-KQVHAVATQMGFENDVSVGNALIDMYSKCG---- 162
++ + FT++ VL ++D +K Q HA A + G SV NAL+ +YS+C
Sbjct: 143 GFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPS 202
Query: 163 LLCSARRVFHGMFERDVVSWTSM--------------------------------ISGYC 190
LL SAR+VF + E+D SWT+M ISGY
Sbjct: 203 LLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYV 262
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
N EA+ + RM G+E ++FTY
Sbjct: 263 NCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHF 322
Query: 218 -NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS-------------K 263
N+++ Y + G N A A F +M A+ DLV+WNA++SG+ S K
Sbjct: 323 DNSLVTLYYKCGKFNEARAIFEKMPAK----DLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 264 REN------------------EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
+N E LKLF M G +P + +G +++ + G+ G++
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
HA + ++G + G+ALI MY+KCG +++A+ +F + SWNA+I G+HG
Sbjct: 439 FHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGH 498
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
+++++E ML++G+R + +T ++VL+ACSH GLV++G + F SM+ Y + +HYA
Sbjct: 499 GVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYA 558
Query: 426 CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLR 485
++D+LCRSG+ EA ++ +P T + A +GC +HG +L + ++ F +
Sbjct: 559 RLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618
Query: 486 KPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+++LSN+ AA G+W E +RK+M+++ V+K+ S +E +
Sbjct: 619 HDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQ 665
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 182/416 (43%), Gaps = 61/416 (14%)
Query: 116 FSIVLKACVGL--LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
++ L+ C+ L ++ + VH GF+ + N LID+Y K L AR++F
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDE 74
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA 233
+ E D ++ T+M+SGYC + A +FE + + YNA+I ++ D +A
Sbjct: 75 ISEPDKIARTTMVSGYCASGDIALARSVFEETPVS--MRDTVMYNAMITGFSHNNDGYSA 132
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQ-SKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
F +M EGF PD T+ ++++G A E + ++ L SG
Sbjct: 133 INLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSG------------- 179
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS----LKDARTLFEITRIK 348
AG +T +AL+ +YS+C S L AR +F+ K
Sbjct: 180 AGYVTS----------------------VSNALVSVYSRCASSPSLLHSARKVFDDIPEK 217
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+ SW M+ Y K+G D EL + M +E M+ V +++S + GL ++ LE+
Sbjct: 218 DERSWTTMMTGYVKNGCFDLGKELLKGM-DENMKL--VAYNAMISGYVNCGLYQEALEMV 274
Query: 409 RSMKERYGVKISKEHY-----ACVVDMLCRSGRMVEAYDLLRQ-VPMYVTNSMAGAFRNG 462
R M G+++ + Y AC L + G+ V AY L R+ + NS+ +
Sbjct: 275 RRMVSS-GIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDNSLVTLYYKC 333
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
+ R + F +M + + L + + G EA+ + K MKEKN+
Sbjct: 334 GKFNEARAI-------FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 271/524 (51%), Gaps = 63/524 (12%)
Query: 72 KIPNPNVFMLNWM--VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
K +P+ +W+ + + + +F+EAI + M R + F F VLKA GL D+
Sbjct: 49 KPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDL 108
Query: 130 KKGKQVHAVATQMGF-ENDVSVGNALIDMYSKCG--------------------LLCSAR 168
K G+Q+HA A + G+ + V+V N L++MY KCG + ++
Sbjct: 109 KTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSK 168
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA--SYAR 226
+F +RD+VSW +MIS + + EA+ F M LEG+E + T +++ S+
Sbjct: 169 ALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLE 228
Query: 227 RGD-SNAAFAFFSR---MTAEGFVPDLVT--------------------------WNAMI 256
R D A+ R + FV + WNAMI
Sbjct: 229 RLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMI 288
Query: 257 SGFAQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLT-GSIQIGREIHALVCRMG 314
SG+A++ + +AL LF M+ V+G+ PN T+ V+ A + +I G+EIHA R
Sbjct: 289 SGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNM 348
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L D+ GSAL+DMY+KCG L +R +F KNV +WN +I G HG + ++ELF+
Sbjct: 349 LASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFK 408
Query: 375 RMLEEGMR-----ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
M+ E R NEVT I+V +ACSH GL+ +GL +F MK +GV+ + +HYACVVD
Sbjct: 409 NMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVD 468
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMA-GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
+L R+G++ EAY+L+ +P A + C IH +L + +
Sbjct: 469 LLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVAS 528
Query: 489 GFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+V+LSNI ++ G W++A +RK M++ V+K+PG S +E R+E
Sbjct: 529 HYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDE 572
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 192/421 (45%), Gaps = 70/421 (16%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYR 110
L+ +YA G V+ ++ +F+ + + M++W M S+F+ + F EA+ +F LM
Sbjct: 154 LMAMYAKLGRVDDSKALFESFVDRD--MVSWNTMISSFSQSDRFSEALAFFRLMVLEGVE 211
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG--FENDVSVGNALIDMYSKCGLLCSAR 168
+ T + VL AC L + GK++HA + EN VG+AL+DMY C + S R
Sbjct: 212 LDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSF-VGSALVDMYCNCRQVESGR 270
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF-ERMKLEGLEPNQFTY---------- 217
RVF + R + W +MISGY ++A++LF E +K+ GL PN T
Sbjct: 271 RVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHS 330
Query: 218 --------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
+A++ YA+ G N + F+ M + +++T
Sbjct: 331 LAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK----NVIT 386
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSG-----IKPNNVTVTGVLQAGGLTGSIQIGREI 306
WN +I + EAL+LFK M+ KPN VT V A +G I G +
Sbjct: 387 WNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNL 446
Query: 307 -HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI--TRIKNVASWNAMIGCYGKH 363
+ + G+ + ++D+ + G L++A L V +W++++G H
Sbjct: 447 FYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIH 506
Query: 364 GMVDSSIELFE------RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
++EL E LE + ++ V L ++ S+ GL K +E+ ++M++ GV
Sbjct: 507 ----QNVELGEVAAKNLLHLEPNVASHYVLLSNIYSS---AGLWNKAMEVRKNMRQ-MGV 558
Query: 418 K 418
K
Sbjct: 559 K 559
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 138/268 (51%), Gaps = 12/268 (4%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C + L GK++HA +L NDL N F + S LV +Y C V S R VFD I
Sbjct: 220 VLPACSHLERLDVGKEIHAYVLRNNDLIENSF-VGSALVDMYCNCRQVESGRRVFDHILG 278
Query: 76 PNVFMLNWMVMASAFTGNFQEA-IGYFSLMREFIYRCNKFTFSIVLKACV-GLLDIKKGK 133
+ + N M+ A G ++A I + +++ N T + V+ ACV L I KGK
Sbjct: 279 RRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGK 338
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
++HA A + +D++VG+AL+DMY+KCG L +RRVF+ M ++V++W +I
Sbjct: 339 EIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHG 398
Query: 194 KVDEAVVLFERMKLEG-----LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVP 247
K +EA+ LF+ M E +PN+ T+ + A+ + G + F RM + G P
Sbjct: 399 KGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEP 458
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGM 275
+ ++ ++ + EA +L M
Sbjct: 459 TSDHYACVVDLLGRAGQLEEAYELVNTM 486
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 241/451 (53%), Gaps = 41/451 (9%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
N +TF +++K C + I G+++HA + GFE D+ V N+LI MYS CG + AR +F
Sbjct: 9 NHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMF 68
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
D+V+W SMI GY ++ A LFE M E + F++N++IA Y GD
Sbjct: 69 EVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMP----ERDLFSWNSMIAGYVGNGDMT 124
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQS----------------------------- 262
AA F++M D+V+WN MI G+AQ
Sbjct: 125 AAEDLFNKMPFR----DIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYV 180
Query: 263 --KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV-CRMGLHIDV 319
K +E L++F M+ + PN T+ VL A G + G+ IH+ + + DV
Sbjct: 181 RIKDYDECLRMFDKMMGETM-PNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDV 239
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+AL+ MY+KCG++ AR +F+ ++V SWN+MI YG HG D ++E+F M +
Sbjct: 240 LLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKR 299
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G N+ T I VLSAC+H G++ +G F M+ Y ++ EHY C+VD+L R+G M +
Sbjct: 300 GPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKD 359
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
+L+R++PM ++ GA + C H +LA + + E+ R +++LSNI AA
Sbjct: 360 LEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAA 419
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
+G+W + E +RK+MKE+ + K G S +R
Sbjct: 420 EGKWDDVEIVRKMMKERGLTKTTGLSSSLRR 450
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 146/335 (43%), Gaps = 68/335 (20%)
Query: 212 PNQFTY-----------------------------------NAIIASYA---RRGDSNAA 233
PN +T+ N++I Y+ R GD+ A
Sbjct: 8 PNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAM 67
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
F S + DLVTWN+MI G+ ++ A +LF+ M + N + G +
Sbjct: 68 FEVCS-------ISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGN 120
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
G +T + L +M D+ + + +ID Y++ +++ A LF +NV SW
Sbjct: 121 GDMTAA-------EDLFNKMPFR-DIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSW 172
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
N M+ Y + D + +F++M+ E M NE TL+SVL+AC+H G +++G I +K
Sbjct: 173 NIMLALYVRIKDYDECLRMFDKMMGETM-PNEATLVSVLTACAHLGRLDRGKWIHSYIKN 231
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN---GCNIHGRRD 470
++ ++ M + G M DL R V ++N ++ + G +HG+ D
Sbjct: 232 NRVIEPDVLLSTALLTMYAKCGAM----DLARDVFDKMSNRSVVSWNSMIMGYGMHGQAD 287
Query: 471 LAVTMGEEFFEMGLRKP----DGFVMLSNICAADG 501
A+ M F +M R P F+ + + CA G
Sbjct: 288 KALEM---FLDMEKRGPMPNDATFICVLSACAHSG 319
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 33/267 (12%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF--------------------MLNWM 84
++FS S + G Y G GD+ +A +F+K+P ++ + NWM
Sbjct: 106 DLFSWNSMIAG-YVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWM 164
Query: 85 VMASAFTGNFQEAI-----GYFSLMREFI-----YRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ + N A+ Y +R F N+ T VL AC L + +GK
Sbjct: 165 PYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETMPNEATLVSVLTACAHLGRLDRGKW 224
Query: 135 VHA-VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+H+ + E DV + AL+ MY+KCG + AR VF M R VVSW SMI GY
Sbjct: 225 IHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHG 284
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM-TAEGFVPDLVTW 252
+ D+A+ +F M+ G PN T+ ++++ A G + +F M A P + +
Sbjct: 285 QADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHY 344
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSG 279
M+ ++ + +L + M + G
Sbjct: 345 GCMVDLLGRAGLMKDLEELIRKMPMEG 371
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ PN+ T +++ GSI G +IHA + + G +D+F ++LI MYS CG + DAR
Sbjct: 6 VAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDAR 65
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+FE+ I ++ +WN+MI Y K+G + ++ ELFE M E + + S+++ G
Sbjct: 66 AMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDL----FSWNSMIAGYVGNG 121
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ ++F M R V + C++D + M A +L +P
Sbjct: 122 DMTAAEDLFNKMPFRDIVS-----WNCMIDGYAQVQNMEIACELFNWMP 165
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 153/502 (30%), Positives = 262/502 (52%), Gaps = 41/502 (8%)
Query: 63 VNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC-NKFTFSIVLK 121
V A VF +V N M+ A + + A+ ++ M E ++FTF +LK
Sbjct: 28 VGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87
Query: 122 ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS 181
C LL+ K GK +H + +D+ + L++MY+ CG L SAR +F M R+ V
Sbjct: 88 GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147
Query: 182 WTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------ 217
WTSMISGY +EA++L+++M+ +G P++ T
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207
Query: 218 -----------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
+A++ YA+ GD A F +++ + D+ W+A+I G+ ++ R
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDK----DVYAWSALIFGYVKNNRST 263
Query: 267 EALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EAL+LF+ + S ++PN VT+ V+ A G ++ GR +H + R V ++L
Sbjct: 264 EALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSL 323
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
IDM+SKCG + A+ +F+ K++ SWN+M+ + HG+ ++ F M ++ +E
Sbjct: 324 IDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDE 383
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
+T I VL+ACSH GLV++G ++F ++ YGV++ EHY C+VD+LCR+G + EA + +R
Sbjct: 384 ITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIR 443
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
+P+ ++ G+ C ++ +L ++ +++LSNI A W+E
Sbjct: 444 VMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNE 503
Query: 506 AENLRKIMKEKNVQKQPGFSRV 527
+ +R++M EK +QK PG S V
Sbjct: 504 VKKVRELMNEKGIQKTPGCSSV 525
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 194/400 (48%), Gaps = 61/400 (15%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHA----LLCTNDLNIFSLKSKLVGVY 57
+R FP LL C + GK +H + +DL I ++ L+ +Y
Sbjct: 78 DRFTFP----------SLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYI---ETTLLNMY 124
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFT 115
A CGD+ SAR +F+++ + N + W M S + N EA+ + M E + ++ T
Sbjct: 125 AACGDLKSARFLFERMGHRNKVV--WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVT 182
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+ ++ AC L D+ G ++H+ +M + +G+AL++MY+KCG L +AR+VF +
Sbjct: 183 MATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLS 242
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLF-ERMKLEGLEPNQFTYNAIIASYARRGD----- 229
++DV +W+++I GY ++ EA+ LF E + PN+ T A+I++ A+ GD
Sbjct: 243 DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGR 302
Query: 230 -----------------SNAAFAFFS---------RMTAEGFVPDLVTWNAMISGFAQSK 263
+N+ FS R+ DL++WN+M++GFA
Sbjct: 303 WVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHG 362
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR----EIHALVCRMGLHIDV 319
EAL F+ M + ++P+ +T GVL A G +Q G+ EI AL G+ +
Sbjct: 363 LGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALY---GVRLKS 419
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIK-NVASWNAMIG 358
++D+ + G L +AR + ++ + A W +M+G
Sbjct: 420 EHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLG 459
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 130/255 (50%), Gaps = 7/255 (2%)
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M + G ++ + N +IA G +A+ + A D++TWN+M+ F S
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAY--SVFAHTRELDVLTWNSMLRAFVNSNM 58
Query: 265 ENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
AL+ + ML S P+ T +L+ L ++G+ +H V + LH D++ +
Sbjct: 59 PRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIET 118
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
L++MY+ CG LK AR LFE +N W +MI Y K+ + ++ L+++M E+G
Sbjct: 119 TLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSP 178
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA--- 440
+EVT+ +++SAC+ + G+++ ++E +KI + +V+M + G + A
Sbjct: 179 DEVTMATLVSACAELKDLGVGMKLHSHIRE-MDMKICAVLGSALVNMYAKCGDLKTARQV 237
Query: 441 YDLLRQVPMYVTNSM 455
+D L +Y +++
Sbjct: 238 FDKLSDKDVYAWSAL 252
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 19 LLGKCMKSKALRQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C + L G+ VH + T + SL + L+ +++ CGD+++A+ +FD + +
Sbjct: 288 VISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKD 347
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV-H 136
+ N MV A G +EA+ F LM+ + ++ TF VL AC +++GK++ +
Sbjct: 348 LISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFY 407
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISG---YCNV 192
+ G ++D+ + GLL AR M + D W SM+ Y N+
Sbjct: 408 EIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNL 467
Query: 193 SKVDEAVVLFERMKLEGLEP-NQFTYNAIIASYARR 227
+EA + LEP N Y + YA+R
Sbjct: 468 ELGEEAARFLLK-----LEPTNDGVYILLSNIYAKR 498
>gi|326522859|dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 279/551 (50%), Gaps = 48/551 (8%)
Query: 30 RQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
R G+QVH+L + + S LV +YA CG +A V ++ +P+V +V A
Sbjct: 114 RTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSAL 173
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ-MGFEND 147
+G F A M N+ T + +L AC L+ G Q+H + MGF
Sbjct: 174 CRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLV---LGVQIHGYMIKAMGFSQS 230
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V + L+D YS+ G A+ VF + ++VV+W +M+ + + ++A+ LF+ M
Sbjct: 231 VYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMIS 290
Query: 208 EG-LEPNQFTYN------------------AI---IASYARRGDSNAAFAFFSRMTAEGF 245
EG + PN+F ++ AI +AS+ R SNA + + R+ G
Sbjct: 291 EGVVSPNEFAFSIALGACESIALGSQLHSLAIKHGLASHLRV--SNALLSMYGRI---GL 345
Query: 246 V------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
V PD+V+W A IS + Q+ +A+ L M G+ PN+ + VL +
Sbjct: 346 VQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSS 405
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
+ GR+ H L ++G + TG+ALI+MYSKCG + AR F+I ++V SW
Sbjct: 406 CADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSW 465
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS-MK 412
N++I + +HG VD ++ F M G NE TL+ VL+AC+H GLV++G+ FRS M
Sbjct: 466 NSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMA 525
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLA 472
YG ++ HYAC+VDML RSGR +A L+ ++P + C +HG +
Sbjct: 526 GLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLETG 585
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
E+ E+ + +V++S I A GEW +A+ +R+ M E V+K+ G S VE RNE
Sbjct: 586 RLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRKEAGRSWVEVRNE 645
Query: 533 ---FVEKEVQN 540
FV ++V +
Sbjct: 646 VHTFVAQDVSH 656
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 212/463 (45%), Gaps = 58/463 (12%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ-EAIG-YFSLMREFIYRCNKFTFSI 118
G V A +FD++P NV + W S T N + EA G F+ M E N F +
Sbjct: 43 GRVADALDLFDRMPRKNV--VAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNA 100
Query: 119 VLKACVGLLDI--KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE 176
L AC + G+QVH++A + GF D VG+ L+++Y++CG +A V M
Sbjct: 101 ALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMES 160
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------- 223
DVV++TS++S C + A +M G+ PN+ T +I+A+
Sbjct: 161 PDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLVLGVQIHGY 220
Query: 224 --------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
Y+R G+ + A F + + ++VTW M+ +
Sbjct: 221 MIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCK----NVVTWCTMMQLHIRDG 276
Query: 264 RENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
R +AL+LF M+ G + PN + L G SI +G ++H+L + GL +
Sbjct: 277 RPEDALQLFDEMISEGVVSPNEFAFSIAL---GACESIALGSQLHSLAIKHGLASHLRVS 333
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+AL+ MY + G ++ +F ++ SW A I Y ++G + +I L RM +G+
Sbjct: 334 NALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLT 393
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE--- 439
N+ SVLS+C+ L+++G + F + + G + +++M + G++V
Sbjct: 394 PNDYAFSSVLSSCADLALLDQGRQ-FHCLALKLGCDVKTCTGNALINMYSKCGQIVPARL 452
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM 482
A+D++ + NS+ +G HG D+ + + F EM
Sbjct: 453 AFDIMDHRDVTSWNSLI----HGHAQHGEVDMVL---KAFSEM 488
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 15/291 (5%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LG C +++ G Q+H+L + L + + + L+ +Y G V +F I +P++
Sbjct: 305 LGAC---ESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDI 361
Query: 79 FMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++W SA+ G+ ++AI S M N + FS VL +C L + +G+Q H
Sbjct: 362 --VSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFH 419
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+A ++G + GNALI+MYSKCG + AR F M RDV SW S+I G+ +VD
Sbjct: 420 CLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVD 479
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT---WN 253
+ F M G EPN+ T ++A+ G + AFF R G +T +
Sbjct: 480 MVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFF-RSAMAGLYGTFLTPPHYA 538
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
M+ +S R ++AL L + M +P + +L + L G+++ GR
Sbjct: 539 CMVDMLGRSGRFDDALCLIEEM---PFEPGVLVWKTLLASCRLHGNLETGR 586
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 159/362 (43%), Gaps = 57/362 (15%)
Query: 155 IDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ 214
+D K G + A +F M ++VV+WTS +SG + + A +F M G+ N
Sbjct: 36 LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALND 95
Query: 215 FTY-------------------------------------NAIIASYARRGDSNAAFAFF 237
F + ++ YAR G + AA A
Sbjct: 96 FACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVL 155
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+RM + PD+V + +++S +S A + M+ G+ PN TVT +L A
Sbjct: 156 ARMES----PDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAA---C 208
Query: 298 GSIQIGREIHALVCR-MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+ +G +IH + + MG V+T S L+D YS+ G A+T+F+ + KNV +W M
Sbjct: 209 CPLVLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTM 268
Query: 357 IGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
+ + + G + +++LF+ M+ EG + NE L AC L + S+ ++
Sbjct: 269 MQLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESIALGSQ----LHSLAIKH 324
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQV--PMYV--TNSMAGAFRNGCNIHGRRDL 471
G+ ++ M R G + + + R + P V T +++ F+NG HG + +
Sbjct: 325 GLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNG---HGEKAI 381
Query: 472 AV 473
A+
Sbjct: 382 AL 383
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/490 (32%), Positives = 250/490 (51%), Gaps = 40/490 (8%)
Query: 33 KQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT 91
KQ+HA L + + SL S++ V A + A+L+F + V N + + A
Sbjct: 32 KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEG 91
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
+ +AI F +REF + +T S VLKAC LLD++ GK VH ++G ++++ +
Sbjct: 92 DSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQ 151
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N ++ +Y+ CG + AR+VF M +RDV++W
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITW----------------------------- 182
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
N +IA + GD+ A+ F+ M ++ +W +MI G+AQ + EA+ L
Sbjct: 183 ------NIMIARLVKMGDAEGAYKLFAEMPER----NVRSWTSMIGGYAQCGKSKEAIDL 232
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
F M +G+ PN VTV VL A G++ +GR IH R G ++ + LIDMY K
Sbjct: 233 FLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVK 292
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
CG L+DA +F+ + V SW+AMI HG + ++ LF +M+ G++ N VT I +
Sbjct: 293 CGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGI 352
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
L ACSH G+VEKG + F SM YG+ EHY C+VD+ R+G + EA++ + +P+
Sbjct: 353 LHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAP 412
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRK 511
+ GA GC +H LA ++ +V+LSNI A G W + +RK
Sbjct: 413 NGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRK 472
Query: 512 IMKEKNVQKQ 521
+M+++ ++
Sbjct: 473 LMRDRGTWEK 482
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/549 (30%), Positives = 282/549 (51%), Gaps = 40/549 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL +C+ +++ K + A + + + SKLV CG++ AR +FD +P ++
Sbjct: 53 LLRQCIDERSISGIKNIQAQMLKSGFPVELSGSKLVDASLKCGEIGYARQLFDGMPERHI 112
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
N ++ +EA+ + LM +++T S V KA L K+ ++ H +
Sbjct: 113 VTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGL 172
Query: 139 ATQMGFE-NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
A +G E ++V VG+AL+DMY K G A+ V + E+DVV T++I GY + E
Sbjct: 173 AVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTE 232
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF------------ 245
AV F+ M +E ++PN++TY +++ S D M GF
Sbjct: 233 AVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLT 292
Query: 246 -------------------VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
P+ VTW ++ISG Q+ RE AL F+ M+ +KPN+ T
Sbjct: 293 MYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFT 352
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
++ L+ + GR++H +V + G D + GS LI++Y KCG AR +F+
Sbjct: 353 LSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLS 412
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+V S N MI Y ++G ++ELFERM+ G++ N+VT++SVL AC++ GLVE+G E
Sbjct: 413 EVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCE 472
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR---NGC 463
+F S + + + ++ +HYAC+VDML R+GR+ EA L+ + VTN +R + C
Sbjct: 473 LFDSFR-KDKIMLTNDHYACMVDMLGRAGRLEEAEMLITE----VTNPDLVLWRTLLSAC 527
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
+H + ++A + + E+ ++LSN+ A+ G+W ++ MKE ++K P
Sbjct: 528 KVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMKLKKNPA 587
Query: 524 FSRVEKRNE 532
S VE E
Sbjct: 588 MSWVEIDKE 596
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 204/427 (47%), Gaps = 54/427 (12%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
TFS +L+ C+ I K + A + GF ++S G+ L+D KCG + AR++F GM
Sbjct: 49 TFSQLLRQCIDERSISGIKNIQAQMLKSGFPVELS-GSKLVDASLKCGEIGYARQLFDGM 107
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------- 217
ER +V+W S+I+ Y + EAV ++ M + P+++T
Sbjct: 108 PERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQ 167
Query: 218 -------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
+A++ Y + G + A R+ + D+V A+I G
Sbjct: 168 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK----DVVLITALIVG 223
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
++Q + EA+K F+ MLV ++PN T VL + G I G+ IH L+ + G
Sbjct: 224 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 283
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+ + ++L+ MY +C + D+ +F+ + N +W ++I ++G ++++ F +M+
Sbjct: 284 LASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMR 343
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG--- 435
+ ++ N TL S L CS+ + E+G ++ + +YG K + ++++ + G
Sbjct: 344 DSVKPNSFTLSSALRGCSNLAMFEEGRQV-HGIVSKYGFDRDKYAGSGLIELYGKCGCSD 402
Query: 436 --RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
R+V +D L +V + N+M ++ N GR A+ + E +GL +P+ +L
Sbjct: 403 MARLV--FDTLSEVDVISLNTMIYSYAQ--NGFGRE--ALELFERMINLGL-QPNDVTVL 455
Query: 494 SNICAAD 500
S + A +
Sbjct: 456 SVLLACN 462
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 211/452 (46%), Gaps = 45/452 (9%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKAL-RQGKQVHALLCTNDL---NIFSLKSKLVGV 56
M RL+ N L Y + K +L ++ ++ H L L N+F + S LV +
Sbjct: 134 MYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVF-VGSALVDM 192
Query: 57 YAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTF 116
Y G A+LV D++ +V ++ +++ + G EA+ F M + N++T+
Sbjct: 193 YVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTY 252
Query: 117 SIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE 176
+ VL +C L DI GK +H + + GFE+ ++ +L+ MY +C L+ + VF +
Sbjct: 253 ASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKY 312
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNA----------------- 219
+ V+WTS+ISG + + A++ F +M + ++PN FT ++
Sbjct: 313 PNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQV 372
Query: 220 ------------------IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
+I Y + G S+ A F ++ D+++ N MI +AQ
Sbjct: 373 HGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSE----VDVISLNTMIYSYAQ 428
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
+ EAL+LF+ M+ G++PN+VTV VL A +G ++ G E+ + + +
Sbjct: 429 NGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKDKIMLTNDH 488
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
+ ++DM + G L++A L ++ W ++ H V+ + + ++LE
Sbjct: 489 YACMVDMLGRAGRLEEAEMLITEVTNPDLVLWRTLLSACKVHRKVEMAERITRKILEIA- 547
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
+E TLI + + + G ++ +E+ MKE
Sbjct: 548 PGDEGTLILLSNLYASTGKWKRVIEMKSKMKE 579
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/555 (30%), Positives = 273/555 (49%), Gaps = 78/555 (14%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDK 72
L +L C + K L GK++H + ++L FS + + LVG+Y CGD+ SA +F K
Sbjct: 273 LASVLPACSRMKWLFVGKELHGYIVRHEL--FSNGFVANALVGMYRRCGDMKSAFKIFSK 330
Query: 73 ----------------IPNPNV-----------------FMLNWMVMASAFTGNF--QEA 97
+ N NV ++W M S NF +A
Sbjct: 331 FARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDA 390
Query: 98 IGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALID 156
+ F L+ E I + FT +L + I++GK++H++A G +++ VG AL++
Sbjct: 391 LMLFRDLLMEGI-EPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVE 449
Query: 157 MYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT 216
MY KC + +A+ F + ERD T
Sbjct: 450 MYCKCNDIIAAQMAFDEISERDTS-----------------------------------T 474
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
+NA+I+ YAR RM ++GF P++ TWN++++G ++K+ + A++LF M
Sbjct: 475 WNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQ 534
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
VS ++P+ TV +L A +I G+++HA R G D G+ L+DMY+KCGS+K
Sbjct: 535 VSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIK 594
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
++ N+ NAM+ Y HG + I +F RML+ +R + VT +SVLS+C
Sbjct: 595 HCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCV 654
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
H G ++ G E F M E Y + + +HY C+VD+L R+G++ EAY L++ +PM +
Sbjct: 655 HAGSIKIGYECFYLM-ETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTW 713
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
A GC IH L E+ E+ +V+L+N+ A+ G WH+ R++M +K
Sbjct: 714 SALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDK 773
Query: 517 NVQKQPGFSRVEKRN 531
+QK PG S +E R+
Sbjct: 774 GMQKSPGCSWIEDRD 788
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 186/392 (47%), Gaps = 44/392 (11%)
Query: 26 SKALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
S +L GKQ+H+ + T N +++KL+ +Y+ A +FDK+ N+ +
Sbjct: 44 SNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAV 103
Query: 85 VMASAFTGNFQEAIGYFSLMREFI-----YRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
+ G F + F L EF+ + + F F +VL C GL D++ G+QVH +
Sbjct: 104 LRLHLNMGLFYKG---FMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMV 160
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
+ GF +V VGNALIDMY KCG L A++V GM ++D VSW S+I+ V EA+
Sbjct: 161 LKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEAL 220
Query: 200 VLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
L E M L LEPN T++A+I ++ + F+RM G PD
Sbjct: 221 DLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPD----------- 269
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
T+ VL A + +G+E+H + R L +
Sbjct: 270 ------------------------ARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNG 305
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
F +AL+ MY +CG +K A +F K AS+N MI Y ++G V + ELF +M +E
Sbjct: 306 FVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQE 365
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
G+ + ++ ++S + + L +FR +
Sbjct: 366 GVERDRISWNCMISGHVDNFMFDDALMLFRDL 397
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/560 (30%), Positives = 283/560 (50%), Gaps = 64/560 (11%)
Query: 33 KQVHALLCTNDL-NIFSLKSKLVGVYAGC-GDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
K++HA + L N SK++ YA D+ A VFD+I P F+ N ++ A
Sbjct: 5 KRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQ 64
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
+ +AI ++ + + TF +LKAC + + +G+Q+H T++G +D+ V
Sbjct: 65 SDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFV 124
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
N+LI +Y+ CG LC AR VF M +DVVSW S+I GY ++ + + LF+ M+ EG+
Sbjct: 125 SNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGV 184
Query: 211 EPNQFTYNAIIASYARRGD----------------------SNAAFAFFSR----MTAEG 244
+ ++ T ++++ R GD N +F R +AE
Sbjct: 185 KADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEK 244
Query: 245 F-----VPDLVTWNA-------------------------------MISGFAQSKRENEA 268
V ++VT NA MISG++Q+ ++A
Sbjct: 245 VFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDA 304
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L++F+ M + +KP+ + + V+ + G++ +G+ +H V R + D ++LIDM
Sbjct: 305 LEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDM 364
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y KCGS K+A +F+ + K+ SWN++I +G S+ LF+ ML EG R N VT
Sbjct: 365 YMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTF 424
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ VL AC++ LVE+GL+ F SMK Y ++ +HY CVVD+L R+G++ +A + ++P
Sbjct: 425 LGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMP 484
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
+ + CN HG +A + ++ E+ + +LSN A+ W EA N
Sbjct: 485 IDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMN 544
Query: 509 LRKIMKEKNVQKQPGFSRVE 528
+R+ M + +V+K PG S VE
Sbjct: 545 VRQCMADTDVRKSPGCSAVE 564
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 273/545 (50%), Gaps = 46/545 (8%)
Query: 17 DCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+ +L ++++ L + ++ L+ D + S + L G YA G V+ AR VF+K+P+
Sbjct: 112 NVMLTGYVRNRRLGEAHKLFDLMPKKD--VVSWNAMLSG-YAQNGFVDEAREVFNKMPHR 168
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV--GLLDIKKGKQ 134
N N ++ A G +EA F ++ + ++ C+ G +
Sbjct: 169 NSISWNGLLAAYVHNGRLKEARRLFE---------SQSNWELISWNCLMGGYVKRNMLGD 219
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+ +M DV N +I Y++ G L A+R+F+ RDV +WT+M+SGY
Sbjct: 220 ARQLFDRMPVR-DVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGM 278
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF--------- 245
VDEA F+ M ++ N+ +YNA++A Y + A F M
Sbjct: 279 VDEARKYFDEMPVK----NEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITG 334
Query: 246 ----------------VP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
+P D V+W A+ISG+AQ+ EAL +F M G N T
Sbjct: 335 YGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTF 394
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
+ L ++++G+++H V + G F G+AL+ MY KCGS +A +FE
Sbjct: 395 SCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEE 454
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
K+V SWN MI Y +HG ++ LFE M + G++ +E+T++ VLSACSH GL+++G E
Sbjct: 455 KDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEY 514
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
F SM Y VK + +HY C++D+L R+GR+ EA +L+R +P + GA IHG
Sbjct: 515 FYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHG 574
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
+L E F+M + +V+LSN+ AA G W + +R M+E VQK G+S V
Sbjct: 575 NTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWV 634
Query: 528 EKRNE 532
E +N+
Sbjct: 635 EVQNK 639
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 149/308 (48%), Gaps = 9/308 (2%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSA 66
P+ N ++Y L G K + G+ A+ C N I S + + G Y G + A
Sbjct: 290 PVKN-EISYNAMLAGYVQYKKMVIAGELFEAMPCRN---ISSWNTMITG-YGQNGGIAQA 344
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
R +FD +P + ++ A G+++EA+ F M+ N+ TFS L C +
Sbjct: 345 RKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADI 404
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
++ GKQVH + GFE VGNAL+ MY KCG A VF G+ E+DVVSW +MI
Sbjct: 405 AALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMI 464
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
+GY +A+VLFE MK G++P++ T ++++ + G + +F M + V
Sbjct: 465 AGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNV 524
Query: 247 -PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
P + MI ++ R EA L + M P + +L A + G+ ++G +
Sbjct: 525 KPTSKHYTCMIDLLGRAGRLEEAENLMRNM---PFDPGAASWGALLGASRIHGNTELGEK 581
Query: 306 IHALVCRM 313
+V +M
Sbjct: 582 AAEMVFKM 589
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 169/356 (47%), Gaps = 43/356 (12%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLK-- 121
AR +FDK+P ++F +W VM + + N EA F LM + + +++ +L
Sbjct: 96 ARDLFDKMPERDLF--SWNVMLTGYVRNRRLGEAHKLFDLMP----KKDVVSWNAMLSGY 149
Query: 122 ACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS 181
A G +D + V +M N +S N L+ Y G L ARR+F +++S
Sbjct: 150 AQNGFVD-----EAREVFNKMPHRNSIS-WNGLLAAYVHNGRLKEARRLFESQSNWELIS 203
Query: 182 WTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT 241
W ++ GY + + +A LF+RM + + ++N +I+ YA+ GD + A R+
Sbjct: 204 WNCLMGGYVKRNMLGDARQLFDRMPVRDV----ISWNTMISGYAQVGDLSQA----KRLF 255
Query: 242 AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
E + D+ TW AM+SG+ Q+ +EA K F M V N + G +Q + +
Sbjct: 256 NESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKM---VI 312
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
G A+ CR ++ + + +I Y + G + AR LF++ ++ SW A+I Y
Sbjct: 313 AGELFEAMPCR-----NISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYA 367
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE 406
++G + ++ +F M +G +N T LS C+ HG +V+ G E
Sbjct: 368 QNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFE 423
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 155/350 (44%), Gaps = 59/350 (16%)
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
E D+ N ++ Y + L A ++F M ++DVVSW +M+SGY VDEA +F +
Sbjct: 105 ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNK 164
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M N ++N ++A+Y G A F + +L++WN ++ G+ +
Sbjct: 165 MP----HRNSISWNGLLAAYVHNGRLKEARRLFESQSNW----ELISWNCLMGGYVKRNM 216
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+A +LF M V + N ++G Q G L+ Q R + R DVFT +A
Sbjct: 217 LGDARQLFDRMPVRDVISWNTMISGYAQVGDLS---QAKRLFNESPIR-----DVFTWTA 268
Query: 325 LIDMYSKCGSLKDART-------------------------------LFEITRIKNVASW 353
++ Y + G + +AR LFE +N++SW
Sbjct: 269 MVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSW 328
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
N MI YG++G + + +LF+ M + + V+ +++S + G E+ L +F MK
Sbjct: 329 NTMITGYGQNGGIAQARKLFDMMPQR----DCVSWAAIISGYAQNGHYEEALNMFVEMK- 383
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
R G ++ ++C + + A +L +QV V + F GC
Sbjct: 384 RDGESSNRSTFSCALSTCAD----IAALELGKQVHGQVVKA---GFETGC 426
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 176/373 (47%), Gaps = 57/373 (15%)
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+ D+ N I + + G SA RVF+ M R VS+ +MISGY +K A LF++
Sbjct: 43 DPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDK 102
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M E + F++N ++ Y R A F M + D+V+WNAM+SG+AQ+
Sbjct: 103 MP----ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKK----DVVSWNAMLSGYAQNGF 154
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR---------EIHALVCRMGL 315
+EA ++F M N+++ G+L A G ++ R E+ + C MG
Sbjct: 155 VDEAREVFNKM----PHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGG 210
Query: 316 HI------------------DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
++ DV + + +I Y++ G L A+ LF + I++V +W AM+
Sbjct: 211 YVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMV 270
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA-CSHGGLVEKGLEIFRSMKERYG 416
Y ++GMVD + + F+ M + NE++ ++L+ + +V G E+F +M R
Sbjct: 271 SGYVQNGMVDEARKYFDEMPVK----NEISYNAMLAGYVQYKKMVIAG-ELFEAMPCR-- 323
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
IS + ++ ++G + +A L +P S A A +G +G + A+ M
Sbjct: 324 -NISS--WNTMITGYGQNGGIAQARKLFDMMPQRDCVSWA-AIISGYAQNGHYEEALNM- 378
Query: 477 EEFFEMGLRKPDG 489
F EM K DG
Sbjct: 379 --FVEM---KRDG 386
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 262/511 (51%), Gaps = 37/511 (7%)
Query: 59 GC--GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFT 115
GC D+ SAR VFDK+ NV M+ A G EAI F ++ Y ++FT
Sbjct: 205 GCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFT 264
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+ ++ C + + GK++H+ + G D+ VG +L+DMY+KCGL+ AR+VF GM
Sbjct: 265 LTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMR 324
Query: 176 ERDVVSWTSMISGYCNVS--KVDEAVVLFERMKLEG-LEPNQFTYNAIIASYARRGDSNA 232
E +V+SWT++++GY EA+ +F M L+G + PN FT++ ++ + A D +
Sbjct: 325 EHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDF 384
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK----LFKGMLVS---------- 278
+ G N ++S +A+S R A K LF+ LVS
Sbjct: 385 GEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVK 444
Query: 279 -----------------GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
G ++ T +L G+I G +IHA+V ++G D+
Sbjct: 445 DFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSV 504
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
+ALI MYSKCG+ + A +F NV +W ++I + KHG ++ELF MLE G+
Sbjct: 505 NNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGV 564
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
+ N+VT I+VLSACSH GL+++ + F SM++ +G+ EHYAC+VD+L RSG + EA
Sbjct: 565 KPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAI 624
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
+ + +P + F C +H L + E P +++LSN+ A +G
Sbjct: 625 EFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEG 684
Query: 502 EWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
W + +RK MK+K + K+ G S +E N+
Sbjct: 685 RWEDVAAIRKNMKQKQITKEAGSSWIEVENQ 715
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 183/381 (48%), Gaps = 58/381 (15%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
T S++LK C+ + GK +H T D + N+LI +YSK +A +F M
Sbjct: 54 TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113
Query: 175 --FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE-GLEPNQFTYNAIIASYARRGDSN 231
+RDVVS++S+IS + N +AV +F+++ L+ G+ PN++ + A+I + + G
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173
Query: 232 AAFAFFSRMTAEGFV-----------------------------------PDLVTWNAMI 256
F + G+ ++VTW MI
Sbjct: 174 TGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMI 233
Query: 257 SGFAQSKRENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ AQ +EA+ LF MLV SG P+ T+TG++ + +G+E+H+ V R GL
Sbjct: 234 TRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGL 293
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY--GKHGMVDSSIELF 373
+D+ G +L+DMY+KCG +++AR +F+ R NV SW A++ Y G G ++ +F
Sbjct: 294 VLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMF 353
Query: 374 ERM-LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG--VKISKEHYACV--- 427
M L+ G+ N T VL AC+ L F ++ +G +K+ CV
Sbjct: 354 SNMLLQGGVAPNCFTFSGVLKACA-------SLPDFDFGEQVHGQTIKLGLSAIDCVGNG 406
Query: 428 -VDMLCRSGRMVEA---YDLL 444
V + +SGRM A +D+L
Sbjct: 407 LVSVYAKSGRMESARKCFDVL 427
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 175/368 (47%), Gaps = 60/368 (16%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ C + + L GK++H+ + + L + + LV +YA CG V AR VFD + N
Sbjct: 268 LISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHN 327
Query: 78 VFMLNWMVMASAFT----GNFQEAIGYFS-LMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
V ++W + + + G +EA+ FS ++ + N FTFS VLKAC L D G
Sbjct: 328 V--MSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFG 385
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS----------- 181
+QVH ++G VGN L+ +Y+K G + SAR+ F +FE+++VS
Sbjct: 386 EQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKD 445
Query: 182 ------------------------WTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
+ S++SG + + + + + G +
Sbjct: 446 FNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVN 505
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
NA+I+ Y++ G+ AA F+ M +++TW ++I+GFA+ ++AL+LF ML
Sbjct: 506 NALISMYSKCGNKEAALQVFNDMED----CNVITWTSIINGFAKHGFASKALELFYNMLE 561
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIG-------REIHALVCRMGLHIDVFTGSALIDMYS 330
+G+KPN+VT VL A G I R+ H +V RM + + ++D+
Sbjct: 562 TGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHY------ACMVDLLG 615
Query: 331 KCGSLKDA 338
+ G L +A
Sbjct: 616 RSGLLSEA 623
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 6/202 (2%)
Query: 31 QGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
+G+Q+HA++ S+ + L+ +Y+ CG+ +A VF+ + + NV ++ A
Sbjct: 485 KGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFA 544
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHAVATQMGFEND 147
G +A+ F M E + N T+ VL AC VGL+D + K ++ G
Sbjct: 545 KHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLID-EAWKHFTSMRDNHGIVPR 603
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
+ ++D+ + GLL A + M F+ D + W + + G C V + + +M
Sbjct: 604 MEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFL-GSCRVHRNTKLGEHAAKMI 662
Query: 207 LEGLEPNQFTYNAIIASYARRG 228
LE + TY + YA G
Sbjct: 663 LEREPHDPATYILLSNLYATEG 684
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 172/553 (31%), Positives = 280/553 (50%), Gaps = 47/553 (8%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ C K +AL +G+++H L+ T L++ L+ +YA CG ++ A+ VF+ + +
Sbjct: 36 LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 95
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+F + ++ A A G + A+ + M N TF+ L C + + G+ +H
Sbjct: 96 LFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQ 155
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
D + ++L++MY KC + AR+VF GM R+V S+T+MIS Y + E
Sbjct: 156 RILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAE 215
Query: 198 AVVLFERM-KLEGLEPNQFTY-----------------------------------NAII 221
A+ LF RM K+E +EPN +T+ NA++
Sbjct: 216 ALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALV 275
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y + G A F MTA ++++W +MI+ +AQ EAL LFK M ++
Sbjct: 276 TMYGKCGSPVEARKVFDSMTAR----NVISWTSMIAAYAQHGNPQEALNLFKRM---DVE 328
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ V+ + L A L G++ GREIH V L S L+ MY++CGSL DAR +
Sbjct: 329 PSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQMETS-LLSMYARCGSLDDARRV 387
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F + ++ S NAMI + +HG ++ ++ +M +EG+ A+ +T +SVL ACSH LV
Sbjct: 388 FNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLV 447
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG-AFR 460
+ +S+ +GV EHY C+VD+L RSGR+ +A +L+ +P Y +++A
Sbjct: 448 ADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMP-YQADAVAWMTLL 506
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+GC HG D + FE+ + +V LSN+ AA + +A +RK M+E+ V +
Sbjct: 507 SGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTR 566
Query: 521 QPGFSRVEKRNEF 533
S +E NE
Sbjct: 567 PVAVSYIEIDNEL 579
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 214/450 (47%), Gaps = 45/450 (10%)
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
M+ A G +A+ + M E +KF + ++ AC L +++G+++H G
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
F D+ + AL+ MY+KCG L A+RVF GM +D+ +W+S+I+ Y + + AVVL+
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV------------- 250
RM EG+EPN T+ + A A R+ A D V
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 251 ------------------TWNAMISGFAQSKRENEALKLFKGM-LVSGIKPNNVTVTGVL 291
++ AMIS + Q+ EAL+LF M V I+PN T +L
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A G+++ GR++H + G +V +AL+ MY KCGS +AR +F+ +NV
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SW +MI Y +HG ++ LF+RM + + V+ S L+AC+ G +++G EI +
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRV 357
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
E S + ++ M R G + +A ++ ++ + N+M AF HGR
Sbjct: 358 VE--ANLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQ----HGR 411
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+ A+ + + + G+ DG +S + A
Sbjct: 412 KKQALRIYRKMEQEGI-PADGITFVSVLVA 440
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 179/385 (46%), Gaps = 39/385 (10%)
Query: 18 CLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C LG C L G+ +H +L + L+ L+ +Y C ++ AR VF+ +
Sbjct: 136 CALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKAR 195
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREF-IYRCNKFTFSIVLKACVGLLDIKKGKQV 135
NV M+ A G EA+ FS M + N +TF+ +L A GL +++KG++V
Sbjct: 196 NVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKV 255
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H GF+ +V V NAL+ MY KCG AR+VF M R+V+SWTSMI+ Y
Sbjct: 256 HRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNP 315
Query: 196 DEAVVLFERMKL---------------------EGLEPNQFTYNAIIAS----------Y 224
EA+ LF+RM + EG E + A +AS Y
Sbjct: 316 QEALNLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQMETSLLSMY 375
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
AR G + A F+RM D + NAMI+ F Q R+ +AL++++ M GI +
Sbjct: 376 ARCGSLDDARRVFNRMKTR----DAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADG 431
Query: 285 VTVTGVLQAGGLTGSIQIGRE-IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+T VL A T + R+ + +LV G+ V ++D+ + G L DA L E
Sbjct: 432 ITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVE 491
Query: 344 ITRIK-NVASWNAMIGCYGKHGMVD 367
+ + +W ++ +HG +D
Sbjct: 492 TMPYQADAVAWMTLLSGCKRHGDLD 516
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/583 (27%), Positives = 281/583 (48%), Gaps = 103/583 (17%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV----------------------- 85
L + L+ Y G AR VFD +P+PN+F N ++
Sbjct: 43 LLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRD 102
Query: 86 ------MASAFTGNFQEAIG---YFSLMR-EFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+ + F+G A Y +L++ + R ++ T S ++ A L D GKQ
Sbjct: 103 IVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQF 162
Query: 136 HAVATQMGFENDVSVGNALIDMYSK-------------------------------CGLL 164
H ++GF + VG+ L+DMY+K C ++
Sbjct: 163 HCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMV 222
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
ARR+F M +RD ++WT+M++G+ EA+ +F RM+ +G+ +Q+T+ +I+ +
Sbjct: 223 EEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTAC 282
Query: 225 A-----------------RRGDSNA------------------AFAFFSRMTAEGFVPDL 249
R D N A F RMT + ++
Sbjct: 283 GALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCK----NI 338
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
++W A+I G+ Q+ EA+++F M GI P++ T+ V+ + S++ G + H L
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCL 398
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
GL + +AL+ +Y KCGS++DA LF+ + SW A++ Y + G +
Sbjct: 399 ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKET 458
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
I+LFE+ML +G++ + VT I VLSACS G VEKG F SM++ +G+ +HY C++D
Sbjct: 459 IDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMID 518
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
+ RSG++ EA + ++Q+PM+ G + C + G ++ E E+ + P
Sbjct: 519 LYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPAS 578
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+V+L ++ AA G+W+E LR+ M+++ V+K+PG S ++ +N+
Sbjct: 579 YVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNK 621
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 207/462 (44%), Gaps = 75/462 (16%)
Query: 17 DCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
D LGK + LR G +A + S LV +YA V A+ FD++ +
Sbjct: 155 DRALGKQFHCQILRLGFGANAFV----------GSPLVDMYAKMSLVGDAKRAFDEVDSK 204
Query: 77 NVFMLN-----------------------------WMVMASAFTGN--FQEAIGYFSLMR 105
NV M N W M + FT N EA+ F MR
Sbjct: 205 NVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMR 264
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
+++TF +L AC L +++GKQ+HA + ++++V VG+AL+DMYSKC +
Sbjct: 265 FQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIK 324
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
A VF M ++++SWT++I GY +EAV +F M+ +G++P+ +T ++I+S A
Sbjct: 325 LAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCA 384
Query: 226 RRGD----------------------SNAAFAFF---------SRMTAEGFVPDLVTWNA 254
SNA + R+ E D V+W A
Sbjct: 385 NLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTA 444
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE-IHALVCRM 313
++SG+AQ R E + LF+ ML G+KP+ VT GVL A G ++ GR H++
Sbjct: 445 LVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDH 504
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
G+ + +ID+YS+ G LK+A ++ + W ++ G ++
Sbjct: 505 GIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWA 564
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
E +LE + N + + + S + G + ++ R M++R
Sbjct: 565 AENLLEIDPQ-NPASYVLLCSMHAAKGQWNEVAQLRRGMRDR 605
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 10/222 (4%)
Query: 16 LDCLLGKCMKSKALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L ++ C +L +G Q H L L + ++ ++ + LV +Y CG + A +FD++
Sbjct: 376 LGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMS 435
Query: 75 NPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ ++W + S + G +E I F M + + TF VL AC ++KG
Sbjct: 436 FHD--QVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKG 493
Query: 133 KQ-VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYC 190
+ H++ G +ID+YS+ G L A M D + W +++S C
Sbjct: 494 RSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA-C 552
Query: 191 NVSKVDEAVVLFERMKLEGLEP-NQFTYNAIIASYARRGDSN 231
+ + D + + L ++P N +Y + + +A +G N
Sbjct: 553 RL-RGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWN 593
>gi|326487167|dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 279/551 (50%), Gaps = 48/551 (8%)
Query: 30 RQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
R G+QVH+L + + S LV +YA CG +A V ++ +P+V +V A
Sbjct: 114 RTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSAL 173
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ-MGFEND 147
+G F A M N+ T + +L AC L+ G Q+H + MGF
Sbjct: 174 CRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLV---LGVQIHGYMIKAMGFSQS 230
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V + L+D YS+ G A+ VF + ++VV+W +M+ + + ++A+ LF+ M
Sbjct: 231 VYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMIS 290
Query: 208 EG-LEPNQFTYN------------------AI---IASYARRGDSNAAFAFFSRMTAEGF 245
EG + PN+F ++ AI +AS+ R SNA + + R+ G
Sbjct: 291 EGVVSPNEFAFSIALGACESIALGSQLHSLAIKHGLASHLRV--SNALLSMYGRI---GL 345
Query: 246 V------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
V PD+V+W A IS + Q+ +A+ L M G+ PN+ + VL +
Sbjct: 346 VQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSS 405
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
+ GR+ H L ++G + TG+ALI+MYSKCG + AR F+I ++V SW
Sbjct: 406 CADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSW 465
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS-MK 412
N++I + +HG VD ++ F M G NE TL+ VL+AC+H GLV++G+ FRS M
Sbjct: 466 NSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMA 525
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLA 472
YG ++ HYAC+VDML RSGR +A L+ ++P + C +HG +
Sbjct: 526 GLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLETG 585
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
E+ E+ + +V++S I A GEW +A+ +R+ M E V+K+ G S VE RNE
Sbjct: 586 RLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRKEAGRSWVEVRNE 645
Query: 533 ---FVEKEVQN 540
FV ++V +
Sbjct: 646 VHTFVAQDVSH 656
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 212/463 (45%), Gaps = 58/463 (12%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ-EAIG-YFSLMREFIYRCNKFTFSI 118
G V A +FD++P NV + W S T N + EA G F+ M E N F +
Sbjct: 43 GRVADALDLFDRMPRKNV--VAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNA 100
Query: 119 VLKACVGLLDI--KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE 176
L AC + G+QVH++A + GF D VG+ L+++Y++CG +A V M
Sbjct: 101 ALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMES 160
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------- 223
DVV++TS++S C + A +M G+ PN+ T +I+A+
Sbjct: 161 PDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLVLGVQIHGY 220
Query: 224 --------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
Y+R G+ + A F + + ++VTW M+ +
Sbjct: 221 MIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCK----NVVTWCTMMQLHIRDG 276
Query: 264 RENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
R +AL+LF M+ G + PN + L G SI +G ++H+L + GL +
Sbjct: 277 RPEDALQLFDEMISEGVVSPNEFAFSIAL---GACESIALGSQLHSLAIKHGLASHLRVS 333
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+AL+ MY + G ++ +F ++ SW A I Y ++G + +I L RM +G+
Sbjct: 334 NALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLT 393
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE--- 439
N+ SVLS+C+ L+++G + F + + G + +++M + G++V
Sbjct: 394 PNDYAFSSVLSSCADLALLDQGRQ-FHCLALKLGCDVKTCTGNALINMYSKCGQIVPARL 452
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM 482
A+D++ + NS+ +G HG D+ + + F EM
Sbjct: 453 AFDIMDHRDVTSWNSLI----HGHAQHGEVDMVL---KAFSEM 488
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 15/291 (5%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LG C +++ G Q+H+L + L + + + L+ +Y G V +F I +P++
Sbjct: 305 LGAC---ESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDI 361
Query: 79 FMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++W SA+ G+ ++AI S M N + FS VL +C L + +G+Q H
Sbjct: 362 --VSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFH 419
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+A ++G + GNALI+MYSKCG + AR F M RDV SW S+I G+ +VD
Sbjct: 420 CLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVD 479
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT---WN 253
+ F M G EPN+ T ++A+ G + AFF R G +T +
Sbjct: 480 MVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFF-RSAMAGLYGTFLTPPHYA 538
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
M+ +S R ++AL L + M +P + +L + L G+++ GR
Sbjct: 539 CMVDMLGRSGRFDDALCLIEEM---PFEPGVLVWKTLLASCRLHGNLETGR 586
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 159/362 (43%), Gaps = 57/362 (15%)
Query: 155 IDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ 214
+D K G + A +F M ++VV+WTS +SG + + A +F M G+ N
Sbjct: 36 LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALND 95
Query: 215 FTY-------------------------------------NAIIASYARRGDSNAAFAFF 237
F + ++ YAR G + AA A
Sbjct: 96 FACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVL 155
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+RM + PD+V + +++S +S A + M+ G+ PN TVT +L A
Sbjct: 156 ARMES----PDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAA---C 208
Query: 298 GSIQIGREIHALVCR-MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+ +G +IH + + MG V+T S L+D YS+ G A+T+F+ + KNV +W M
Sbjct: 209 CPLVLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTM 268
Query: 357 IGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
+ + + G + +++LF+ M+ EG + NE L AC L + S+ ++
Sbjct: 269 MQLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESIALGSQ----LHSLAIKH 324
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQV--PMYV--TNSMAGAFRNGCNIHGRRDL 471
G+ ++ M R G + + + R + P V T +++ F+NG HG + +
Sbjct: 325 GLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNG---HGEKAI 381
Query: 472 AV 473
A+
Sbjct: 382 AL 383
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/507 (31%), Positives = 266/507 (52%), Gaps = 42/507 (8%)
Query: 29 LRQGKQVHALLCTNDLNIFSLKS--KLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
LR G A +D+ + + S L+ VYA GD++ AR V D +P N ++
Sbjct: 293 LRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGARRVLDAMPARNEVSWGTLIA 352
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
G+ EA+ +S M R N FS VL AC L D++ G ++HA A +MG
Sbjct: 353 RHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSST 412
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
++ V ++LIDMY KC A+RVF+ + E+
Sbjct: 413 NLFVSSSLIDMYCKCKQCTYAQRVFNSLPEK----------------------------- 443
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
N +N++I+ Y+ G A F++M A + V+WN MISG+A+++R
Sbjct: 444 ------NTVCWNSLISGYSWNGKMVEAEGLFNKMPAR----NSVSWNTMISGYAENRRFG 493
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
+AL F ML SG P +T++ VL A S+++GR +HA + ++G+ ++F G+AL
Sbjct: 494 DALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALC 553
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
DMY+K G L +R +F KN +W AM+ ++G + SI LFE M+E G+ NE
Sbjct: 554 DMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEH 613
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T +++L ACSH GLVE+ + F +M+ +G+ +HY C+VD+L R+G + EA +LL +
Sbjct: 614 TFLAILFACSHCGLVEQAIHYFETMQA-HGIPPKSKHYTCMVDVLARAGCLPEAEELLMK 672
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
V + S + + C+ + +++ ++ E+ G+V+LSN+ A+ G+W +A
Sbjct: 673 VSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDA 732
Query: 507 ENLRKIMKEKNVQKQPGFSRVEKRNEF 533
R +M+ +++K G S ++ R ++
Sbjct: 733 AETRILMQGASLKKDAGCSWLQLRGQY 759
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 193/459 (42%), Gaps = 79/459 (17%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSI 118
G V A ++++ P +V M+ S F N ++A F M R N T
Sbjct: 194 GSVRDAVELYERCPLHSVAFFTAMI--SGFVRNELHKDAFTVFRKMLTCSVRPNVVTLIC 251
Query: 119 VLKACVGL--LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE 176
V+KACVG D+ G AV + FE + V N+LI +Y + G +ARRVF M
Sbjct: 252 VIKACVGAGEFDLAMGVVGLAVKCNL-FEKSIEVHNSLITLYLRMGDAAAARRVFDDMEV 310
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAF 236
RDVVSWT+++ Y ++ +D A + + M N+ ++ +IA + ++GD+ A
Sbjct: 311 RDVVSWTALLDVYADLGDLDGARRVLDAMPAR----NEVSWGTLIARHEQKGDTAEALKL 366
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
+S+M A+G +PN + VL A
Sbjct: 367 YSQMLADG-----------------------------------CRPNISCFSSVLSACAT 391
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC------------------------ 332
++ G IHA +MG ++F S+LIDMY KC
Sbjct: 392 LQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSL 451
Query: 333 -------GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
G + +A LF +N SWN MI Y ++ ++ F ML G E
Sbjct: 452 ISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGE 511
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
+TL SVL AC++ +E G + + + G++ + + DM +SG + + +
Sbjct: 512 ITLSSVLLACANLCSLEMGRMVHAEIV-KLGIEDNIFMGTALCDMYAKSGDLDSSRRVFY 570
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
Q+P N A G +G + ++++ E+ E G+
Sbjct: 571 QMPEK-NNITWTAMVQGLAENGFAEESISLFEDMIENGI 608
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 141/327 (43%), Gaps = 72/327 (22%)
Query: 154 LIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN 213
++ + K G + SARR+F+GM E+ VVS+T+M+ V +AV L+ER L +
Sbjct: 155 MVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSV--- 211
Query: 214 QFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
AFF+ M ISGF +++ +A +F+
Sbjct: 212 ---------------------AFFTAM---------------ISGFVRNELHKDAFTVFR 235
Query: 274 GMLVSGIKPNNVTVTGVLQAG----------GLTG----------SIQIGREIHALVCRM 313
ML ++PN VT+ V++A G+ G SI++ + L RM
Sbjct: 236 KMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRM 295
Query: 314 GLHI------------DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
G DV + +AL+D+Y+ G L AR + + +N SW +I +
Sbjct: 296 GDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGARRVLDAMPARNEVSWGTLIARHE 355
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
+ G +++L+ +ML +G R N SVLSAC+ + G I + + G +
Sbjct: 356 QKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRI-HANALKMGSSTNL 414
Query: 422 EHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ ++DM C+ + A + +P
Sbjct: 415 FVSSSLIDMYCKCKQCTYAQRVFNSLP 441
>gi|297744641|emb|CBI37903.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 161/492 (32%), Positives = 255/492 (51%), Gaps = 75/492 (15%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALL----------------------CTNDL---- 44
L L LL C S+ALR+GK+VH L C ++
Sbjct: 57 LDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARK 116
Query: 45 --------NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQE 96
N++S + L G YA G + AR +FDK+P +V N MV+A A G + E
Sbjct: 117 VFDKMSARNLYSWNNMLSG-YAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDE 175
Query: 97 AIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALID 156
A+ ++S R+ +CN F+F+ VL CV L ++ +QVH GF ++V + ++++D
Sbjct: 176 ALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLD 235
Query: 157 MYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT 216
Y KCGL+ AR++F M RDV++WT+M+SGY
Sbjct: 236 AYVKCGLMGDARKLFDEMSARDVLAWTTMVSGY--------------------------- 268
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
A+ GD +A F M + + V+W A+ISG+A++ ++AL+LF M+
Sbjct: 269 --------AKWGDMKSANELFVEMPEK----NPVSWTALISGYARNGMGHKALELFTKMM 316
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+ ++P+ T + L A S++ G++IHA + R+ + SALIDMYSKCGSL
Sbjct: 317 LFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLG 376
Query: 337 DARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
R +F++ K +V WN +I +HG + +I++ + M+ G + +++T + +L+AC
Sbjct: 377 IGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNAC 436
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH GLV++GL F SM YG+ S+EHYAC++D+L R+G E D L ++P + +
Sbjct: 437 SHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRV 496
Query: 456 AGAFRNGCNIHG 467
A C IHG
Sbjct: 497 WNALLGVCRIHG 508
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 195/400 (48%), Gaps = 23/400 (5%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS-VGNALIDMYSKCGLLCSAR 168
R + T + +L+ C +++GK+VH G + + + N LI+MY+KCG AR
Sbjct: 56 RLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEAR 115
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG 228
+VF M R++ SW +M+SGY + + A LF++M E + ++N ++ ++A+ G
Sbjct: 116 KVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMP----EKDVVSWNTMVIAHAQCG 171
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
+ A F+S G + ++ +++ + K ++ +LV+G N V +
Sbjct: 172 YWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSS 231
Query: 289 GVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
VL A G + R++ + R DV + ++ Y+K G +K A LF
Sbjct: 232 SVLDAYVKCGLMGDARKLFDEMSAR-----DVLAWTTMVSGYAKWGDMKSANELFVEMPE 286
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
KN SW A+I Y ++GM ++ELF +M+ +R ++ T S L AC+ ++ G +I
Sbjct: 287 KNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQI 346
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRM---VEAYDLL-RQVPMYVTNSMAGAFRNGC 463
+ R + + + ++DM + G + + +DL+ ++ + + N++ A
Sbjct: 347 HAYLL-RINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQ-- 403
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADG 501
HG + A+ M ++ G KPD FV++ N C+ G
Sbjct: 404 --HGCGEEAIQMLDDMVRSG-AKPDKITFVVILNACSHSG 440
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
I + + NEA+ + + G++ ++ T+ +LQ + +++ G+ +H + GL
Sbjct: 31 IVKLCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGL 90
Query: 316 -HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
F + LI+MY+KCG +AR +F+ +N+ SWN M+ Y K GM+ + +LF+
Sbjct: 91 KRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFD 150
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
+M E+ + V+ +++ A + G ++ L + ++
Sbjct: 151 KMPEKDV----VSWNTMVIAHAQCGYWDEALRFYSEFRQ 185
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/479 (32%), Positives = 246/479 (51%), Gaps = 55/479 (11%)
Query: 60 CGDVNS---ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTF 116
C ++NS A +F NPNV++ ++ + + + I + M + +
Sbjct: 74 CSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAV 133
Query: 117 SIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE 176
+ VLKAC L +K+G++VH+ ++G ++ S+ LI++Y KCG ARRVF M E
Sbjct: 134 TSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPE 193
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAF 236
RDVV+ T M I Y G
Sbjct: 194 RDVVASTVM-----------------------------------INYYFDHG-------- 210
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
+ D V W AMI G ++ N AL++F+ M + PN VT+ VL A
Sbjct: 211 ---------IKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSE 261
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
G++Q+GR + + + + + ++ F G ALI+MYS+CG + +A+ +FE + KNV ++N+M
Sbjct: 262 LGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSM 321
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I + HG ++ELF ++++G + VT + VL+ACSHGGL E G EIF SM + YG
Sbjct: 322 IMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYG 381
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
++ EHY C+VD+L R GR+ EAY +R + + + M GA + C IHG +LA +
Sbjct: 382 IEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVA 441
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
+ +++LSN ++ G+W EA +R M+E+ ++K+PG S +E NE E
Sbjct: 442 KSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHE 500
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 161/342 (47%), Gaps = 28/342 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C AL++G++VH+ + L+ S++ KL+ +Y CG AR VFD++P +
Sbjct: 136 VLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERD 195
Query: 78 VF----MLN------------WMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIV 119
V M+N W M G A+ F M+ N+ T V
Sbjct: 196 VVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCV 255
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
L AC L ++ G+ V + + E + VG ALI+MYS+CG + A+RVF M E++V
Sbjct: 256 LSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNV 315
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
+++ SMI G+ K EAV LF + +G P+ T+ ++ + + G + F F
Sbjct: 316 ITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHS 375
Query: 240 MTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
M + G P + + M+ + R EA + M V+ P++V + +L A + G
Sbjct: 376 MAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVA---PDHVMLGALLSACKIHG 432
Query: 299 SIQIGREI--HALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
++++ + + C+ + D T L + YS G K+A
Sbjct: 433 NLELAERVAKSLVACK---NADSGTYILLSNAYSSSGKWKEA 471
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/546 (29%), Positives = 276/546 (50%), Gaps = 38/546 (6%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C S + GKQ+HA ++ + ++ L+ +Y ++ A VF IP +
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKD 233
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREF-IYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+++W + + F+ G EA+ + M F ++ N++ F LKAC LL G Q
Sbjct: 234 --LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQ 291
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + + + G +L DMY++CG L SARRVF + D SW +I+G N
Sbjct: 292 IHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGY 351
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL----- 249
DEAV +F +M+ G P+ + +++ + + + S + GF+ DL
Sbjct: 352 ADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNS 411
Query: 250 ---------------------------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
V+WN +++ Q ++ E L+LFK MLVS +P
Sbjct: 412 LLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEP 471
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+++T+ +L+ S+++G ++H + GL + F + LIDMY+KCGSL AR +F
Sbjct: 472 DHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIF 531
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ ++V SW+ +I Y + G + ++ LF+ M G+ N VT + VL+ACSH GLVE
Sbjct: 532 DSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVE 591
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+GL+++ +M+ +G+ +KEH +CVVD+L R+GR+ EA + ++ + + +
Sbjct: 592 EGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSA 651
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C G LA E ++ V+L ++ A+ G W A LR MK+ +V+K P
Sbjct: 652 CKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIP 711
Query: 523 GFSRVE 528
G S +E
Sbjct: 712 GQSWIE 717
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 198/416 (47%), Gaps = 44/416 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ C S++L QG+++H + ++ + L + ++ +Y CG + AR VFD +P N
Sbjct: 73 LICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERN 132
Query: 78 VFMLNWMVMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ ++ + G EAI Y +++E + ++F F ++KAC D+ GKQ+H
Sbjct: 133 LVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP-DQFAFGSIIKACASSSDVGLGKQLH 191
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A ++ + + NALI MY + + A RVF+G+ +D++SW+S+I+G+ +
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEF 251
Query: 197 EAVVLFERMKLEGL-EPNQFTY------------------------------NAIIAS-- 223
EA+ + M G+ PN++ + NAI
Sbjct: 252 EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSL 311
Query: 224 ---YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
YAR G N+A F ++ PD +WN +I+G A + +EA+ +F M SG
Sbjct: 312 CDMYARCGFLNSARRVFDQIER----PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGF 367
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P+ +++ +L A ++ G +IH+ + + G D+ ++L+ MY+ C L
Sbjct: 368 IPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFN 427
Query: 341 LFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
LFE R + SWN ++ +H + LF+ ML + +T+ ++L C
Sbjct: 428 LFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 158/325 (48%), Gaps = 32/325 (9%)
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
T+ ++ AC + +G+++H + D + N ++ MY KCG L AR VF M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD----- 229
ER++VS+TS+I+GY + EA+ L+ +M E L P+QF + +II + A D
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 230 -----------------SNAAFAF---FSRMTAEGFV------PDLVTWNAMISGFAQSK 263
NA A F++M+ V DL++W+++I+GF+Q
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 264 RENEALKLFKGMLVSGI-KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
E EAL K ML G+ PN L+A G +IH L + L + G
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+L DMY++CG L AR +F+ + ASWN +I +G D ++ +F +M G
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 383 ANEVTLISVLSACSHGGLVEKGLEI 407
+ ++L S+L A + + +G++I
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQI 393
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/489 (31%), Positives = 261/489 (53%), Gaps = 41/489 (8%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N++S L G YA GDVN+AR +FD++ +V N +V+A A G F EAIG +
Sbjct: 128 NLYSWNHMLAG-YAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDF 186
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
R N F+F+ VL CV L +++ KQVH GF +++ + ++++D Y+KCG +
Sbjct: 187 RRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEM 246
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
AR +F M +D+ +WT+++SG Y
Sbjct: 247 RCARTLFDEMLVKDIHAWTTIVSG-----------------------------------Y 271
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
A+ GD N+A F +M + + V+W+A+ISG+A++ +EAL F M+ GI P
Sbjct: 272 AKWGDMNSASELFHQMPEK----NPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQ 327
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
T + L A +++ G+++H + R + S+LIDMYSKCG L+ + +F +
Sbjct: 328 YTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHL 387
Query: 345 TRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
K +V WN MI ++G + ++++F M+E G++ + +T I +LSACSH GLV++
Sbjct: 388 MGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQE 447
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
GL F++M +GV +EHY+C++D+L R+G VE + L + + + A C
Sbjct: 448 GLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVC 507
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
IH +L + E E+ + +V L+++ A G+W E +R++M EK ++K+ G
Sbjct: 508 RIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERG 567
Query: 524 FSRVEKRNE 532
S ++ N+
Sbjct: 568 ISWIDVGNK 576
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 200/467 (42%), Gaps = 97/467 (20%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS-V 150
G EA+ Y + + R F +L+ C K GK VH GF+ + V
Sbjct: 41 GRLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIV 100
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
N LI MY +CG AR+VF M R++ SW M++GY + V+ A LF+RM +
Sbjct: 101 ANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRM----M 156
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
E + ++N I+ +YA++G N A G D + + F+
Sbjct: 157 EKDVVSWNTIVLAYAKQGCFNEAI---------GLYRDFRRLDMGFNAFS---------- 197
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
F G+L+ +K +Q+ +++H V G ++ S+++D Y+
Sbjct: 198 -FAGVLILCVK---------------LKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYA 241
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
KCG ++ ARTLF+ +K++ +W ++ Y K G ++S+ ELF +M E+ N V+ +
Sbjct: 242 KCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEK----NPVSWSA 297
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY-------ACVVDMLCRSGRMVEAYDL 443
++S + L + L+ F M ++G I+ E Y AC + G+ V Y L
Sbjct: 298 LISGYARNSLGHEALDYFTKMM-KFG--INPEQYTFSSCLCACASIAALKHGKQVHGY-L 353
Query: 444 LRQ------------VPMY-----------------------VTNSMAGAFRNGCNIHGR 468
+R + MY V N+M A N HG
Sbjct: 354 IRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQ--NGHGE 411
Query: 469 RDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIM 513
+ A+ M + E GL KPD F+++ + C+ G E K M
Sbjct: 412 K--AMQMFNDMVESGL-KPDRITFIVILSACSHSGLVQEGLRFFKAM 455
>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 622
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/538 (30%), Positives = 278/538 (51%), Gaps = 44/538 (8%)
Query: 32 GKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
G Q+H L T + + ++ +YA D+ SAR VFD +P+ + N M+ A
Sbjct: 85 GTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQ 144
Query: 91 TGNFQEAIGYFSLMREFIYR---CNKFTFSIVLKACVGLLDI--KKGKQVHAVATQMG-- 143
G EA+ ++++F + + ++ C +D+ + G+Q+H + G
Sbjct: 145 NGLLVEAL---QMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRI 201
Query: 144 -FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
++ V + A +D Y +CG AR VF M ++ VSWT++ISG N D A+ +
Sbjct: 202 RIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACY 261
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRG-----------------DSNAAFA---------- 235
M++EG+ PN+ T A++A+ AR G DS +F+
Sbjct: 262 REMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCEC 321
Query: 236 -----FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
R+ + D+V W+++I +A+ ++ALKLF M +PN VT+ V
Sbjct: 322 GQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAV 381
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
+ A S + G IH + + G+ +F +ALI+MY+KCGSL D+R +F ++
Sbjct: 382 ISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDS 441
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+WN+MI YG HG + +++ F M E G++ + VT ++VLSAC+H GLV +G ++F
Sbjct: 442 VTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQ 501
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
+ + I+ EHYAC++D+ RSG++ +A ++LR +PM + + + + C +HGR D
Sbjct: 502 VNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLD 561
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+A ++ + + +LS I A G W + E +R+ MK + ++K GFSR+E
Sbjct: 562 IAESLSSQLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQRLRKCYGFSRIE 619
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 266 NEALKLFKGMLVSGIKPNNV--TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
++ L+ F + S N++ + V++A T G ++H L G + D +
Sbjct: 46 HQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVSN 105
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
++I MY+K ++ AR +F+ ++ +WN+MI Y ++G++ ++++ + G
Sbjct: 106 SIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLP 165
Query: 384 NEVTLISVLSAC 395
L S++S C
Sbjct: 166 KPELLASMVSMC 177
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/474 (31%), Positives = 254/474 (53%), Gaps = 12/474 (2%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTG-NF-QEAIGYFSLMREFIYRCNKFTFSI 118
G + AR +FDK+P+ NV + W +M + NF ++ F MR N T ++
Sbjct: 214 GKIVEARKLFDKMPDRNV--VTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTV 271
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+L+AC +G Q+H + +GF+ D + N++I MYS+C + +A + F M ++D
Sbjct: 272 LLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKD 331
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
+V+W S+I+GY +++AV LFE M + + ++ +I +A G + F
Sbjct: 332 IVTWNSLITGYVQSGNLEKAVFLFENMP----QKDVVSWTTLICGFASEGRIDEFIGLFQ 387
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
M + D + W A+ISG + A F ML S IKPN T++ VL AG
Sbjct: 388 MMPEK----DAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMA 443
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
+ G +IHA+V +M + D+ ++L+ MYSKCG++ DA +F ++ NV ++N +I
Sbjct: 444 ILNQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIIT 503
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
++G+ ++E+F +M ++ + N +T + VLSAC H GLVE+G F M+ Y ++
Sbjct: 504 GLAQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQ 563
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEE 478
+HYAC+VD+LCR+G EA L+ +P + GA H R D+A +
Sbjct: 564 PEPDHYACMVDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQN 623
Query: 479 FFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
FE+ +V+LSN+ + G+ + E +R + K + ++K PG S + ++E
Sbjct: 624 LFELEPNSATPYVILSNLHSISGDERKHELIRLMKKSRGLKKSPGCSWIILKDE 677
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 180/370 (48%), Gaps = 59/370 (15%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ L+ YA ++N AR VF+KIP+PNV N M+ A EA FS M +
Sbjct: 82 TALLTAYAENSEINKAREVFNKIPDPNVASYNAMITAYHRRNMVDEAFELFSSMPQ---- 137
Query: 111 CNKFTFSIVLKACV--GLLDIKKGKQVHAVATQMGFENDVSVG-NALIDMYSKCGLLCSA 167
N +++ ++ V G+ D+ A ++ E V V N LI+ YSK G + A
Sbjct: 138 RNSVSYATMITGFVHAGMFDM---------AEKLHREKPVIVSSNVLINGYSKVGRVEDA 188
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR 227
R+F GM E+DVVSW+SMISG C V K+ EA LF++M + N T+ +I Y +
Sbjct: 189 VRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMP----DRNVVTWTLMIDGYMKM 244
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
+GF+ LF M G++ N T+
Sbjct: 245 N-----------FLKDGFI------------------------LFLNMRREGVEVNATTL 269
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
T +L+A G G +IH LV +G +D + +++I MYS+C S+ A F++
Sbjct: 270 TVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVK 329
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
K++ +WN++I Y + G ++ ++ LFE M ++ + V+ +++ + G +++ + +
Sbjct: 330 KDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDV----VSWTTLICGFASEGRIDEFIGL 385
Query: 408 FRSMKERYGV 417
F+ M E+ +
Sbjct: 386 FQMMPEKDAI 395
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 169/371 (45%), Gaps = 33/371 (8%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N+ I + G + A +F+ M ++ VSWT++++ Y S++++A +F ++ +
Sbjct: 51 NSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIP----D 106
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
PN +YNA+I +Y RR + AF FS M + V++ MI+GF + + A KL
Sbjct: 107 PNVASYNAMITAYHRRNMVDEAFELFSSMPQR----NSVSYATMITGFVHAGMFDMAEKL 162
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
+ V I +NV + G + G + +++I + DV + S++I +
Sbjct: 163 HREKPV--IVSSNVLINGYSKVGRVEDAVRIFDGM--------AEKDVVSWSSMISGLCR 212
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
G + +AR LF+ +NV +W MI Y K + LF M EG+ N TL +
Sbjct: 213 VGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVL 272
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVP 448
L AC +G++I + G + ++ M R + A +DL+ +
Sbjct: 273 LEACGSFDRYGEGIQI-HGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKD 331
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC--AADGEWHEA 506
+ NS+ + N+ + AV + E + + D + IC A++G E
Sbjct: 332 IVTWNSLITGYVQSGNL----EKAVFLFE-----NMPQKDVVSWTTLICGFASEGRIDEF 382
Query: 507 ENLRKIMKEKN 517
L ++M EK+
Sbjct: 383 IGLFQMMPEKD 393
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 14/222 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L C+L L QG Q+HA++ + N S+++ LV +Y+ CG+V+ A +F I
Sbjct: 432 LSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIK 491
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
PNV N ++ A G +EA+ F+ M++ N TF VL ACV + +++G++
Sbjct: 492 VPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRR 551
Query: 135 VHAVATQM-GFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+ + + + ++D+ + G+ A + M F+ W +++
Sbjct: 552 YFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTH 611
Query: 193 SKVDEAVV----LFERMKLEGLEPNQFTYNAIIAS-YARRGD 229
++D A + LFE LEPN T I+++ ++ GD
Sbjct: 612 LRLDVAELAAQNLFE------LEPNSATPYVILSNLHSISGD 647
>gi|224120036|ref|XP_002318226.1| predicted protein [Populus trichocarpa]
gi|222858899|gb|EEE96446.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 171/510 (33%), Positives = 260/510 (50%), Gaps = 54/510 (10%)
Query: 63 VNSARLVFDKI---PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
++ + L+F ++ + + + N M+ AF G FQE I F M + + + FT+ V
Sbjct: 1 MDYSNLIFSQMGHDSSAEIVIWNAMIRGYAFNGPFQECIRMFDEMPQRGLKPHNFTYPYV 60
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMY------------SKCGL---- 163
+ +C L +GK+VH + GFE+ +V N+L +MY S C L
Sbjct: 61 INSCCELEWYGRGKRVHCEIVKSGFESSYAVANSLFNMYLKMPASFDVGLASNCKLDYAR 120
Query: 164 -----LC---------------------SARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+C SAR +F M ERD+VSW SMI GY KV
Sbjct: 121 KIFDDMCVRPVELWNQMIGKYVNIGDVKSARELFDIMPERDIVSWNSMILGYAKGGKVAN 180
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
A LFE+M E N ++ ++I +YA D A +FF M ++V+WN+MIS
Sbjct: 181 ARGLFEKMP----EKNVISWTSMIGAYADTDDLETARSFFETMPQR----NVVSWNSMIS 232
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
+A+ + E+L LF M G+ P+ T VL A G ++ G+ IH L +
Sbjct: 233 SYAKHGKFVESLNLFVQMQSEGVTPDGYTFVSVLSACSNLGDLEFGKYIHYLSGDLS-QS 291
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
+V G+AL +MY++CG + A +F ++V WN +I HG + +I++F M
Sbjct: 292 EVMVGTALTEMYAQCGDVDKAFAVFIKIGKRDVFCWNVIIKALALHGRSEEAIKIFLLMR 351
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
+ G++ N+ T S L ACSHGGLVE+G IF SM++ Y + HY C++DMLCR+G++
Sbjct: 352 KTGLKPNDFTFTSALFACSHGGLVEEGHIIFNSMEKDYKIIPKITHYGCLIDMLCRNGQL 411
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
EA L+ +P ++ GA GC + G LA + E+ EM + +V+LSNI
Sbjct: 412 EEAMLLVEDMPFQPDVAIWGALLGGCRVTGDLKLAEKVVEKATEMETNESGVYVLLSNIH 471
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
A+ G+W EA + RK M EK + K+ G S V
Sbjct: 472 ASAGQWIEAADARKKMDEKKISKKTGSSVV 501
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 190/441 (43%), Gaps = 96/441 (21%)
Query: 29 LRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
L +++ +C + +++ +++G Y GDV SAR +FD +P ++ N M++
Sbjct: 116 LDYARKIFDDMCVRPVELWN---QMIGKYVNIGDVKSARELFDIMPERDIVSWNSMILGY 172
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
A G A G F M E +V
Sbjct: 173 AKGGKVANARGLFEKMPE---------------------------------------KNV 193
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
++I Y+ L +AR F M +R+VVSW SMIS Y K E++ LF +M+ E
Sbjct: 194 ISWTSMIGAYADTDDLETARSFFETMPQRNVVSWNSMISSYAKHGKFVESLNLFVQMQSE 253
Query: 209 GLEPNQFTYNAIIAS----------------------------------YARRGDSNAAF 234
G+ P+ +T+ +++++ YA+ GD + AF
Sbjct: 254 GVTPDGYTFVSVLSACSNLGDLEFGKYIHYLSGDLSQSEVMVGTALTEMYAQCGDVDKAF 313
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
A F ++ D+ WN +I A R EA+K+F M +G+KPN+ T T L A
Sbjct: 314 AVFIKIGKR----DVFCWNVIIKALALHGRSEEAIKIFLLMRKTGLKPNDFTFTSALFAC 369
Query: 295 GLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK-NVAS 352
G ++ G I +++ + + LIDM + G L++A L E + +VA
Sbjct: 370 SHGGLVEEGHIIFNSMEKDYKIIPKITHYGCLIDMLCRNGQLEEAMLLVEDMPFQPDVAI 429
Query: 353 WNAMI-GCYGKHGMVDSSIELFERMLEEG--MRANEVTLISVLS--ACSHGGLVEKGLEI 407
W A++ GC V ++L E+++E+ M NE + +LS S G +E +
Sbjct: 430 WGALLGGC-----RVTGDLKLAEKVVEKATEMETNESGVYVLLSNIHASAGQWIEAA-DA 483
Query: 408 FRSMKERYGVKISKEHYACVV 428
+ M E+ KISK+ + VV
Sbjct: 484 RKKMDEK---KISKKTGSSVV 501
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/515 (31%), Positives = 266/515 (51%), Gaps = 52/515 (10%)
Query: 33 KQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT 91
K+ HAL+ L+ + L +K++ V D++ A +F ++ +PN ++ N M+ A
Sbjct: 5 KKNHALVIKYALSQSNFLVTKMIDVCDRNEDMDYASFLFKEVIDPNAYLYNAMIRACTHN 64
Query: 92 GNFQEAIGYF-SLMREF--------IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
+ I ++ ++RE+ + ++FTF V+KAC L GKQVHA +
Sbjct: 65 SMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQFFKF 124
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G ++ + NALIDMY+KC L A +F M ER +SW
Sbjct: 125 GKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISW-------------------- 164
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
N II+ + R G A A F M +V+W A+ISG+ +
Sbjct: 165 ---------------NGIISGHVRLGQMRRARALFDEMPNRT----IVSWTAIISGYTRI 205
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
+AL +F+ M ++GI+P+ ++ VL A G+++ G+ IH R GL
Sbjct: 206 GSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGALETGKWIHMFCARNGLLRRTCIC 265
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+ALI+MY+KCG + A LF+ R ++V SW+ MIG HG V +I +FERM + ++
Sbjct: 266 NALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGGLANHGKVREAIAIFERMKQTNIK 325
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
N +T + +LSAC+H G E+GL F +MK+ + ++ EHY +VD+L R+GR+ +A D
Sbjct: 326 PNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLSQALD 385
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
++ ++PM + + G+ + C H ++AV E E+ +V+LSNI A G+
Sbjct: 386 IVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAMEHLEELEPDDTGNYVLLSNIYADLGK 445
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFV 534
W + +RK+++ K ++K PG S +E N EFV
Sbjct: 446 WDDVSRMRKLVRSKRMKKTPGCSLIEVNNVAQEFV 480
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/487 (31%), Positives = 257/487 (52%), Gaps = 43/487 (8%)
Query: 80 MLNWMVMASAFTGN--FQEAIGYFSLMREFIYRC-NKFTFSIVLKACVGLLDIKKGKQVH 136
+L W M AF + + A+ ++ M E ++FTF +LK C LL+ K GK +H
Sbjct: 43 VLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLH 102
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ +D+ + L++MY+ CG L SAR +F M R+ V WTSMISGY +
Sbjct: 103 GQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPN 162
Query: 197 EAVVLFERMKLEGLEPNQFTY-----------------------------------NAII 221
EA++L+++M+ +G P++ T +A++
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALV 222
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML-VSGI 280
YA+ GD A F +++ + D+ W+A+I G+ ++ R EAL+LF+ + S +
Sbjct: 223 NMYAKCGDLKTARQVFDQLSDK----DVYAWSALIFGYVKNNRSTEALQLFREVAGGSNM 278
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+PN VT+ V+ A G ++ GR +H + R V ++LIDM+SKCG + A+
Sbjct: 279 RPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKR 338
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F+ K++ SWN+M+ HG+ ++ F M ++ +E+T I VL+ACSH GL
Sbjct: 339 IFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGL 398
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V++G ++F ++ YGV++ EHY C+VD+LCR+G + EA + +R +P+ ++ G+
Sbjct: 399 VQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSML 458
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
C ++ +L E+ +++LSNI A W+E + +R++M EK +QK
Sbjct: 459 GACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQK 518
Query: 521 QPGFSRV 527
PG S V
Sbjct: 519 TPGCSSV 525
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 192/400 (48%), Gaps = 61/400 (15%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHA----LLCTNDLNIFSLKSKLVGVY 57
+R FP LL C + GK +H + +DL I ++ L+ +Y
Sbjct: 78 DRFTFP----------SLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYI---ETTLLNMY 124
Query: 58 AGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFT 115
A CGD+ SAR +F+++ + N + W M S + N EA+ + M E + ++ T
Sbjct: 125 AACGDLKSARFLFERMGHRNKVV--WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVT 182
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+ ++ AC L D+ G ++H+ +M + +G+AL++MY+KCG L +AR+VF +
Sbjct: 183 MATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLS 242
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMK-LEGLEPNQFTYNAIIASYARRGD----- 229
++DV +W+++I GY ++ EA+ LF + + PN+ T A+I++ A+ GD
Sbjct: 243 DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGR 302
Query: 230 -----------------SNAAFAFFS---------RMTAEGFVPDLVTWNAMISGFAQSK 263
+N+ FS R+ DL++WN+M++G A
Sbjct: 303 WVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHG 362
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR----EIHALVCRMGLHIDV 319
EAL F M + ++P+ +T GVL A G +Q G+ EI AL G+ +
Sbjct: 363 LGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALY---GVRLKS 419
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIK-NVASWNAMIG 358
++D+ + G L +AR + ++ + A W +M+G
Sbjct: 420 EHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLG 459
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 155/335 (46%), Gaps = 59/335 (17%)
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE--PNQFTYNAIIAS------------ 223
DV++W SM+ + N + A+ + M LE P++FT+ +++
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEM-LERSRNVPDRFTFPSLLKGCALLLEFKVGKV 100
Query: 224 -----------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
YA GD +A F RM + V W +MISG+
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHR----NKVVWTSMISGYM 156
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
++ NEAL L+K M G P+ VT+ ++ A + +G ++H+ + M + I
Sbjct: 157 KNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAV 216
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML-EE 379
GSAL++MY+KCG LK AR +F+ K+V +W+A+I Y K+ +++LF +
Sbjct: 217 LGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGS 276
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA----CVVDMLCRSG 435
MR NEVT+++V+SAC+ G +E G + Y + K H ++DM + G
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWV-----HDYITRTQKGHSVSLNNSLIDMFSKCG 331
Query: 436 RMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHG 467
+ A +D + + NSM NG +HG
Sbjct: 332 DIDAAKRIFDSMSYKDLISWNSMV----NGLALHG 362
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 126/244 (51%), Gaps = 4/244 (1%)
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M + G ++ + N +IA G +A+ + A V D++TWN+M+ F S
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAY--SVFAHTRVLDVLTWNSMLRAFVNSNM 58
Query: 265 ENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
AL+ + ML S P+ T +L+ L ++G+ +H V + LH D++ +
Sbjct: 59 PRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIET 118
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
L++MY+ CG LK AR LFE +N W +MI Y K+ + ++ L+++M E+G
Sbjct: 119 TLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSP 178
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
+EVT+ +++SAC+ + G+++ ++E +KI + +V+M + G + A +
Sbjct: 179 DEVTMATLVSACAELKDLGVGMKLHSHIRE-MDMKICAVLGSALVNMYAKCGDLKTARQV 237
Query: 444 LRQV 447
Q+
Sbjct: 238 FDQL 241
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 6/213 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C + L G+ VH + T + SL + L+ +++ CGD+++A+ +FD + +
Sbjct: 288 VISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKD 347
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV-H 136
+ N MV A G +EA+ F LM+ + ++ TF VL AC +++GK++ +
Sbjct: 348 LISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFY 407
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKV 195
+ G ++D+ + GLL AR M + D W SM+ G C V
Sbjct: 408 EIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSML-GACRVYNN 466
Query: 196 DEAVVLFERMKLEGLEP-NQFTYNAIIASYARR 227
E R LE LEP N Y + YARR
Sbjct: 467 LELGEEAARCLLE-LEPTNDGVYILLSNIYARR 498
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 167/507 (32%), Positives = 258/507 (50%), Gaps = 39/507 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
LV Y G ++ AR VFDK+P NV MV G EA F M E N
Sbjct: 84 LVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPE----KN 139
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
+++++L GL++ + + + + ++ V+ N + + S+ G L AR +F
Sbjct: 140 VVSWTVMLG---GLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSE-GRLSEAREIFD 195
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
M +R+VV+WTSMISGY +KVD A LFE M + N+ T+ A++ Y R G N
Sbjct: 196 EMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP----DKNEVTWTAMLKGYTRSGRINE 251
Query: 233 AFAFFSRMTAE----------GF-----------------VPDLVTWNAMISGFAQSKRE 265
A F M + GF D TW+A+I + + E
Sbjct: 252 AAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFE 311
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EAL LF M G++PN ++ +L G S+ GR++H+ + R +D++ S L
Sbjct: 312 LEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVL 371
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
I MY KCG L + +F+ K++ WN++I Y +HG + ++E+F M G +E
Sbjct: 372 ITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDE 431
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
+T I VLSAC + G V++GLEIF SMK +Y V EHYAC+VD+L R+G++ EA +L+
Sbjct: 432 ITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIE 491
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
+P+ + GA + C H DLA ++ ++ +++LSN+ A+ W +
Sbjct: 492 NMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKD 551
Query: 506 AENLRKIMKEKNVQKQPGFSRVEKRNE 532
LRK M+ +NV K PG S +E N+
Sbjct: 552 VAELRKTMRARNVSKSPGCSWIEVDNK 578
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 186/426 (43%), Gaps = 55/426 (12%)
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
G K+ + + +M N +S N L+ Y K G++ AR+VF M ER+VVSWTS
Sbjct: 56 GYFHNKRPAEAQKLFDKMPERNTIS-WNGLVSGYVKNGMISEARKVFDKMPERNVVSWTS 114
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEG 244
M+ GY +DEA +LF RM E N ++ ++ G + A F + +
Sbjct: 115 MVRGYVQEGLIDEAELLFWRMP----EKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKD 170
Query: 245 FVP---------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLV 277
V ++V W +MISG+A + + + A KLF+ M
Sbjct: 171 VVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVM-- 228
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
N VT T +L+ +G I E+ A+ + V + +I + G +
Sbjct: 229 --PDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVK-----PVAACNGMIMGFGLNGEVG 281
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
AR +F+ + K+ +W+A+I Y + G ++ LF M EG+R N ++IS+LS C
Sbjct: 282 KARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCG 341
Query: 397 HGGLVEKGLEIFRSM-KERYGVKISKEHYACVVDMLCRSGRMV---EAYDLLRQVPMYVT 452
++ G ++ + + + + I + ++ M + G +V +D + +
Sbjct: 342 SLASLDHGRQVHSQLVRSHFDLDIYVS--SVLITMYIKCGDLVTGKRVFDRFSSKDIVMW 399
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLR 510
NS+ + HG + A+ + E F G PD F+ + + C G+ E +
Sbjct: 400 NSIIAGYAQ----HGFGEKALEVFHEMFSSGA-APDEITFIGVLSACGYTGKVKEGLEIF 454
Query: 511 KIMKEK 516
+ MK K
Sbjct: 455 ESMKSK 460
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 24/270 (8%)
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
F + ++ I +++ G + AR +F + + V SW ++++GY + + EA LF+
Sbjct: 12 FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71
Query: 204 RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
+M E N ++N +++ Y + G + A F +M ++V+W +M+ G+ Q
Sbjct: 72 KMP----ERNTISWNGLVSGYVKNGMISEARKVFDKMPER----NVVSWTSMVRGYVQEG 123
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL--TGSIQIGREIHALVCRMGLHIDVFT 321
+EA LF M P V+ + GGL G + R + ++ DV
Sbjct: 124 LIDEAELLFWRM------PEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVK----DVVA 173
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
+ +I G L +AR +F+ +NV +W +MI Y + VD + +LFE M ++
Sbjct: 174 STNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDK-- 231
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSM 411
NEVT ++L + G + + E+F++M
Sbjct: 232 --NEVTWTAMLKGYTRSGRINEAAELFKAM 259
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 253/486 (52%), Gaps = 43/486 (8%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ L+ Y GD+ AR + D + N M+ G F++A+ F MR +
Sbjct: 227 TTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQ 286
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND----VSVGNALIDMYSKCGLLCS 166
++ T++ V+ AC GKQVHA + D +SVGN LI +Y K G
Sbjct: 287 VDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYG---- 342
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
KVD A +F M ++ + T+N +++ Y
Sbjct: 343 ---------------------------KVDGARKIFYEMPVKDI----ITWNTLLSGYVN 371
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G A +FF++M + +L+TW MISG AQ+ +ALKLF M + G +PN+
Sbjct: 372 AGRMEEAKSFFAQMPEK----NLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYA 427
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
G + A + G+++ GR++HA + +G + G+A+I MY++CG ++ ART+F
Sbjct: 428 FAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMP 487
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+ SWN+MI G+HG +IEL+E+ML+EG+ + T ++VLSACSH GLVE+G
Sbjct: 488 FVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNR 547
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F SM E YG+ ++HYA ++D+ CR+G+ +A +++ +P + A GC H
Sbjct: 548 YFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTH 607
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
G DL + E+ F++ + +V+LSN+ A+ G W++ RK+M+++ V+K+P S
Sbjct: 608 GNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSW 667
Query: 527 VEKRNE 532
E N+
Sbjct: 668 TEVENK 673
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 167/361 (46%), Gaps = 44/361 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN-----IFSLKSKLVGVYAGCGDVNSARLVFDKI 73
++ C GKQVHA + N+LN + S+ + L+ +Y G V+ AR +F ++
Sbjct: 295 VISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEM 354
Query: 74 PNPNVF-----------------------------MLNWMVMASAFTGN--FQEAIGYFS 102
P ++ +L W VM S N ++A+ F+
Sbjct: 355 PVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFN 414
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M+ Y N + F+ + AC L ++ G+Q+HA +G ++ +SVGNA+I MY++CG
Sbjct: 415 QMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCG 474
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
++ +AR +F M D VSW SMI+ +A+ L+E+M EG+ P++ T+ +++
Sbjct: 475 IVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLS 534
Query: 223 SYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ + G +F+ M G P + MI F ++ + ++A + M
Sbjct: 535 ACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARA 594
Query: 282 PNNVTVTGVLQAGGLT-GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD-AR 339
P + L AG T G++ +G E + ++ D T L +MY+ G D AR
Sbjct: 595 P----IWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDG-TYVLLSNMYASLGRWNDVAR 649
Query: 340 T 340
T
Sbjct: 650 T 650
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 171/410 (41%), Gaps = 74/410 (18%)
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
+ VH GF+ + N LID+Y K AR++F + + DV++ T++I+ Y
Sbjct: 32 ARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSA 91
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
+ + A +F L+ + D V
Sbjct: 92 LGNLKMAREIFNETPLD-------------------------------------MRDTVF 114
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT--GSIQIGREIHAL 309
+NAMI+G++ + A++LF+ M + +P++ T VL A L Q G ++H
Sbjct: 115 YNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCG-QMHGT 173
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGS---------LKDARTLFEITRIKNVASWNAMIGCY 360
V + G+ I +AL+ +Y KC S + AR LF+ +N W +I Y
Sbjct: 174 VVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGY 233
Query: 361 GKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
++G + + E+ + M E+ G+ N +++S H GL E L +FR M+ GV++
Sbjct: 234 VRNGDLTGAREILDTMTEQPGIAWN-----AMISGYLHHGLFEDALTLFRKMR-LLGVQV 287
Query: 420 SKEHYACVVDMLCRS-----GRMVEAYDLL------RQVPMYVTNSMAGAFRNGCNIHGR 468
+ Y V+ G+ V AY L R + V N++ + + G
Sbjct: 288 DESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGA 347
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
R + F+EM ++ + L + G EA++ M EKN+
Sbjct: 348 RKI-------FYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNL 390
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 164/495 (33%), Positives = 259/495 (52%), Gaps = 39/495 (7%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ ++ Y D+N AR VF+ + N M+ G FQEA+ MR +
Sbjct: 227 TTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQ 286
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ T++ ++ AC + + GKQVHA + N L +S C + +A
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQVHAYILK----------NELNPNHSFCLSVSNA--- 333
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
+I+ YC +KVDEA +F M + N T+NAI++ Y G
Sbjct: 334 --------------LITLYCKNNKVDEARKIFYAMPVR----NIITWNAILSGYVNAGRM 375
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
A +FF M V +L+T MISG AQ+ +E LKLFK M + G +P + G
Sbjct: 376 EEAKSFFEEMP----VKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGA 431
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A + G+++ GR++HA + +G + G+A+I MY+KCG ++ A ++F ++
Sbjct: 432 LTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDL 491
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SWN+MI G+HG +IELF++ML+EG+ + +T ++VL+ACSH GLVEKG F S
Sbjct: 492 VSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNS 551
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M E YG+ ++HYA +VD+ CR+G A ++ +P + A GC IHG D
Sbjct: 552 MLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMD 611
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
L + E+ F++ + +V+LSNI A G W+E +RK+M+++ V+K+P S +E
Sbjct: 612 LGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVE 671
Query: 531 NE----FVEKEVQNE 541
N+ V+ +V E
Sbjct: 672 NKVHVFMVDDDVHPE 686
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 145/324 (44%), Gaps = 40/324 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN-----IFSLKSKLVGVYAGCGDVNSARLV---- 69
++ C + + GKQVHA + N+LN S+ + L+ +Y V+ AR +
Sbjct: 295 IISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAM 354
Query: 70 ---------------------------FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS 102
F+++P N+ L M+ A G E + F
Sbjct: 355 PVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFK 414
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
MR + F F+ L AC L ++ G+Q+HA +G+E+ +SVGNA+I MY+KCG
Sbjct: 415 QMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCG 474
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
++ +A VF M D+VSW SMI+ +A+ LF++M EG+ P++ T+ ++
Sbjct: 475 VVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLT 534
Query: 223 SYARRGDSNAAFAFFSRM-TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ + G +F+ M + G P + M+ F ++ + A + M K
Sbjct: 535 ACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSM---PSK 591
Query: 282 PNNVTVTGVLQAGGLTGSIQIGRE 305
P +L + G++ +G E
Sbjct: 592 PGAPVWEALLAGCRIHGNMDLGIE 615
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 157/331 (47%), Gaps = 19/331 (5%)
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
+ VHA GF+ N L++MY K L AR++F + D ++ T++I+ YC
Sbjct: 32 ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCA 91
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
+ ++ +F L + YNA+I YA GD ++A F M + F PD T
Sbjct: 92 LGNLELGREIFNGTPL--YMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFT 149
Query: 252 WNAMISGFAQ-SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
+ +++S E + ++ ++ +G+ + +V L + + + ++G A+V
Sbjct: 150 FTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMV 209
Query: 311 CRMGL-----HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV-ASWNAMIGCYGKHG 364
L D T + +I Y + L AR +FE ++N+ A+WNAMI Y G
Sbjct: 210 SARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFE-AMVENLGAAWNAMISGYVHCG 268
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY 424
++ L +M G++ +++T +++SAC++ G + G ++ + + +++ H
Sbjct: 269 CFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKN---ELNPNHS 325
Query: 425 AC------VVDMLCRSGRMVEAYDLLRQVPM 449
C ++ + C++ ++ EA + +P+
Sbjct: 326 FCLSVSNALITLYCKNNKVDEARKIFYAMPV 356
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/474 (31%), Positives = 254/474 (53%), Gaps = 12/474 (2%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTG-NF-QEAIGYFSLMREFIYRCNKFTFSI 118
G + AR +FDK+P+ NV + W +M + NF ++ F MR N T ++
Sbjct: 222 GKIVEARKLFDKMPDRNV--VTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTV 279
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+L+AC +G Q+H + +GF+ D + N++I MYS+C + +A + F M ++D
Sbjct: 280 LLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKD 339
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
+V+W S+I+GY +++AV LFE M + + ++ +I +A G + F
Sbjct: 340 IVTWNSLITGYVQSGNLEKAVFLFENMP----QKDVVSWTTLICGFASEGRIDEFIGLFQ 395
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
M + D + W A+ISG + A F ML S IKPN T++ VL AG
Sbjct: 396 MMPEK----DAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMA 451
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
+ G +IHA+V +M + D+ ++L+ MYSKCG++ DA +F ++ NV ++N +I
Sbjct: 452 ILNQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIIT 511
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
++G+ ++E+F +M ++ + N +T + VLSAC H GLVE+G F M+ Y ++
Sbjct: 512 GLAQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQ 571
Query: 419 ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEE 478
+HYAC+VD+LCR+G EA L+ +P + GA H R D+A +
Sbjct: 572 PEPDHYACMVDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQN 631
Query: 479 FFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
FE+ +V+LSN+ + G+ + E +R + K + ++K PG S + ++E
Sbjct: 632 LFELEPNSATPYVILSNLHSISGDERKHELIRLMKKSRGLKKSPGCSWIILKDE 685
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 180/370 (48%), Gaps = 59/370 (15%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ L+ YA ++N AR VF+KIP+PNV N M+ A EA FS M +
Sbjct: 90 TALLTAYAENSEINKAREVFNKIPDPNVASYNAMITAYHRRNMVDEAFELFSSMPQR--- 146
Query: 111 CNKFTFSIVLKACV--GLLDIKKGKQVHAVATQMGFENDVSVG-NALIDMYSKCGLLCSA 167
N +++ ++ V G+ D+ A ++ E V V N LI+ YSK G + A
Sbjct: 147 -NSVSYATMITGFVHAGMFDM---------AEKLHREKPVIVSSNVLINGYSKVGRVEDA 196
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR 227
R+F GM E+DVVSW+SMISG C V K+ EA LF++M + N T+ +I Y +
Sbjct: 197 VRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMP----DRNVVTWTLMIDGYMKM 252
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
+GF+ LF M G++ N T+
Sbjct: 253 N-----------FLKDGFI------------------------LFLNMRREGVEVNATTL 277
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
T +L+A G G +IH LV +G +D + +++I MYS+C S+ A F++
Sbjct: 278 TVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVK 337
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
K++ +WN++I Y + G ++ ++ LFE M ++ + V+ +++ + G +++ + +
Sbjct: 338 KDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDV----VSWTTLICGFASEGRIDEFIGL 393
Query: 408 FRSMKERYGV 417
F+ M E+ +
Sbjct: 394 FQMMPEKDAI 403
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 169/371 (45%), Gaps = 33/371 (8%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N+ I + G + A +F+ M ++ VSWT++++ Y S++++A +F ++ +
Sbjct: 59 NSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIP----D 114
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
PN +YNA+I +Y RR + AF FS M + V++ MI+GF + + A KL
Sbjct: 115 PNVASYNAMITAYHRRNMVDEAFELFSSMPQR----NSVSYATMITGFVHAGMFDMAEKL 170
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
+ V I +NV + G + G + +++I + DV + S++I +
Sbjct: 171 HREKPV--IVSSNVLINGYSKVGRVEDAVRIFDGM--------AEKDVVSWSSMISGLCR 220
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
G + +AR LF+ +NV +W MI Y K + LF M EG+ N TL +
Sbjct: 221 VGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVL 280
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVP 448
L AC +G++I + G + ++ M R + A +DL+ +
Sbjct: 281 LEACGSFDRYGEGIQI-HGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKD 339
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC--AADGEWHEA 506
+ NS+ + N+ + AV + E + + D + IC A++G E
Sbjct: 340 IVTWNSLITGYVQSGNL----EKAVFLFE-----NMPQKDVVSWTTLICGFASEGRIDEF 390
Query: 507 ENLRKIMKEKN 517
L ++M EK+
Sbjct: 391 IGLFQMMPEKD 401
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 6/218 (2%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L C+L L QG Q+HA++ + N S+++ LV +Y+ CG+V+ A +F I
Sbjct: 440 LSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIK 499
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
PNV N ++ A G +EA+ F+ M++ N TF VL ACV + +++G++
Sbjct: 500 VPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRR 559
Query: 135 VHAVATQM-GFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+ + + + ++D+ + G+ A + M F+ W +++
Sbjct: 560 YFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTH 619
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-YARRGD 229
++D V L LEPN T I+++ ++ GD
Sbjct: 620 LRLD--VAELAAQNLFELEPNSATPYVILSNLHSISGD 655
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 172/553 (31%), Positives = 274/553 (49%), Gaps = 45/553 (8%)
Query: 19 LLGKCMKSKALRQGKQVH-ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L S A+ G Q+H ALL + L + L+ +YA CG++ A VF +P N
Sbjct: 10 MLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERN 69
Query: 78 VFMLNWMVMASAF--TGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKKGKQ 134
V ++W + F G+ +E + MR N+FT S LKAC + D+ G
Sbjct: 70 V--VSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVW 127
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + GFE V N+L+ +YSK G + ARRVF G R++V+W +MISGY +
Sbjct: 128 IHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGH 187
Query: 195 VDEAVVLFERMKL-----EGLEPNQFTYNAII----------------ASYARRGDSNAA 233
+++++F M+ E +P++FT+ +++ A+ RG S A+
Sbjct: 188 GRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTAS 247
Query: 234 FAFFSRMTAEGFVP------------------DLVTWNAMISGFAQSKRENEALKLFKGM 275
A + + +V + + W +I G AQ + EA++LF
Sbjct: 248 NAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRF 307
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
SG++ + ++ V+ ++ GR++H + +DV ++LIDMY KCG
Sbjct: 308 WSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLT 367
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+A F +NV SW AMI GKHG +I +FE M EG+ +EV +++LSAC
Sbjct: 368 DEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSAC 427
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH GLVE+ F +++ ++ EHYAC+VD+L R+G + EA DL+ +PM T +
Sbjct: 428 SHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGV 487
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
+ C +H + GE + P +VMLSNI A G+W E + +R M+
Sbjct: 488 WQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRR 547
Query: 516 KNVQKQPGFSRVE 528
+ ++KQ G S VE
Sbjct: 548 RGLRKQGGCSWVE 560
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ +L+A + +I G ++H + ++G D G+ LIDMY+KCG L+ A +F
Sbjct: 7 IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVLSACS--------- 396
+NV SW A++ + +HG + L M + NE TL + L AC
Sbjct: 67 ERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGV 126
Query: 397 --HGGLVEKGLE 406
HG V G E
Sbjct: 127 WIHGACVRAGFE 138
>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/544 (29%), Positives = 277/544 (50%), Gaps = 38/544 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN------DLNIFSLKSKLVGVYAGCGDVNSARLVFDK 72
++ C A+ QG++V ++ T+ N+F ++ LV ++A CG ++ AR VF+
Sbjct: 161 VIKACAALGAVAQGRKVWEMVETDIASGNARPNVF-VQCALVDMFAKCGCLDEARNVFES 219
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ ++ M+ + +GN+ E + F+ MR + + + V+ AC +++ G
Sbjct: 220 MQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVG 279
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+H A + G D+ V NAL+DMY KCG + A +F +DVVSW+S+I GY
Sbjct: 280 TALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQN 339
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA----------------RRGDSNAAF-- 234
+ +V LF M G+ PN T +I+ + R G + F
Sbjct: 340 GMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVV 399
Query: 235 -AFFSRMTAEGFV------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
A + +G + DL WN+M++G+A + + A + + G+K
Sbjct: 400 SALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLK 459
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P++VTV VL + G+E+HA V + ++ +AL+DMY KCG L+ A+ +
Sbjct: 460 PDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEV 519
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F++ +N ++N +I +GKH D ++ F+ M +G+ ++VT +++LS CSH GL+
Sbjct: 520 FQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLI 579
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
+KGL ++ SM Y + KEHY+C+VD+ R G++ EA+ + + + G
Sbjct: 580 DKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLA 639
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C +H R D+A +G+ FE P ++LSNI A G W + +R +++E+N++K+
Sbjct: 640 ACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKE 699
Query: 522 PGFS 525
G S
Sbjct: 700 TGNS 703
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 238/502 (47%), Gaps = 63/502 (12%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREF 107
L ++LV YA GDV A VFD +P N F N ++ G F EA+ F ++ +
Sbjct: 90 LVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDG 149
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGN---------ALIDMY 158
+ FT+ V+KAC L + +G++V + E D++ GN AL+DM+
Sbjct: 150 SVAVDGFTYPPVIKACAALGAVAQGRKVWEMV-----ETDIASGNARPNVFVQCALVDMF 204
Query: 159 SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYN 218
+KCG L AR VF M RD+ +WT+MI G + E V LF M+ EG +
Sbjct: 205 AKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAA 264
Query: 219 AIIASYARRGDSNAAFAFF-----SRMTAEGFVP-------------------------- 247
+I++ R G+ A S + + +V
Sbjct: 265 TVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSK 324
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
D+V+W+++I G++Q+ N ++ LF M+ GI PN+ T+ +L + I+ G+EIH
Sbjct: 325 DVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIH 384
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
R GL F SALID+YSK G ++ A T+F +T K++A WN+M+ Y +G D
Sbjct: 385 CFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSD 444
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
S+ + + G++ + VT++SVL C+ ++ +G E+ + +Y + +
Sbjct: 445 SAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKEL-HAYVIKYCINSVCSVNNAL 503
Query: 428 VDMLCRSGRM---VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
+DM C+ G + E + L+ + N + +F H D A++ FF++
Sbjct: 504 LDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGK----HNHEDQALS----FFDLMK 555
Query: 485 RK---PD--GFVMLSNICAADG 501
R PD FV L + C+ G
Sbjct: 556 RDGIAPDKVTFVALLSCCSHAG 577
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 181/410 (44%), Gaps = 53/410 (12%)
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D ++ +++HA G + + L+ Y+K G + A RVF GM R+ +W ++I
Sbjct: 68 DFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIK 127
Query: 188 GYCNVSKVDEAVVLFERMKLEG-------------------------------------- 209
G + + EA+ +F M +G
Sbjct: 128 GLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVETDIAS 187
Query: 210 --LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
PN F A++ +A+ G + A F M V DL W AMI G S E
Sbjct: 188 GNARPNVFVQCALVDMFAKCGCLDEARNVFESMQ----VRDLAAWTAMIGGTVHSGNWLE 243
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
+ LF M G +++ V+ A G G +Q+G +H + G D++ +AL+D
Sbjct: 244 VVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVD 303
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MY KCG ++ A LF T K+V SW+++I Y ++GM + S+ LF M+ G+ N T
Sbjct: 304 MYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSST 363
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG--RMVEA-YDLL 444
L S+L S L+ G EI R+G++ S+ + ++D+ + G R+ E + L
Sbjct: 364 LASILPCLSVLKLIRSGKEI-HCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLT 422
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
+ + NSM + ++G D A ++GL KPD ++S
Sbjct: 423 LDKDLAIWNSMVAGYA----VNGYSDSAFCALRLLQKVGL-KPDHVTVVS 467
>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 250/463 (53%), Gaps = 11/463 (2%)
Query: 76 PNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P+V+ W M S F+ +A+ +F M N T + AC L ++ G
Sbjct: 314 PDVY--TWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGL 371
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
++H A +MG + VGN+LIDMYSKCG L +AR VF + E+DV +W SMI GYC
Sbjct: 372 EIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAG 431
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP-DLVTW 252
+A LF R++ + PN T+NA+I+ + GD + A F M +G V + +W
Sbjct: 432 YGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASW 491
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N++I+G+ Q +N+AL +F+ M PN+VT+ +L A + + +EIH V R
Sbjct: 492 NSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLR 551
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
L ++ ++L+D Y+K G++K +RT+F K++ +WN++I Y HG DS+ +L
Sbjct: 552 RNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQL 611
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F++M G+R N TL S++ A G+V+KG +F S+ E + + + +HY +VD+
Sbjct: 612 FDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYG 671
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV- 491
RSGR+ +A + + +P+ S+ + C HG +LAV + E+ +PD V
Sbjct: 672 RSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHEL---EPDNHVI 728
Query: 492 --MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+L A G++ + +RK+ KE ++K VE RN+
Sbjct: 729 YRLLVQAYALYGKFEQTLKVRKLGKESAMKKCTAQCWVEVRNK 771
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/440 (33%), Positives = 246/440 (55%), Gaps = 2/440 (0%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALL-CTNDLNIFSLKSKLVGVYAGCGDVNSAR 67
+ LS N LL C+ ++ G+++H + + +N F +++KLV +YA CG + AR
Sbjct: 76 SKLSTNTYINLLQTCIDVGSIELGRELHVRMGLVHRVNPF-VETKLVSMYAKCGCLKDAR 134
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
VFD + N++ + M+ A + ++E + F LM + F F +L+AC
Sbjct: 135 KVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCE 194
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D++ K +H++ + G + + N+++ + KCG L AR+ F M ERD VSW MI+
Sbjct: 195 DLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIA 254
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
GYC DEA L + M +G +P TYN +IASY++ GD + +M + G P
Sbjct: 255 GYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAP 314
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
D+ TW +MISGF+QS R ++AL FK M+++G++PN +T+ A S+Q G EIH
Sbjct: 315 DVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIH 374
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+MG+ + G++LIDMYSKCG L+ AR +F+ K+V +WN+MIG Y + G
Sbjct: 375 CFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGG 434
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+ ELF R+ E + N VT +++S C G ++ +++F+ M++ GVK + + +
Sbjct: 435 KAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSL 494
Query: 428 VDMLCRSGRMVEAYDLLRQV 447
+ + G +A + RQ+
Sbjct: 495 IAGYHQLGEKNKALAIFRQM 514
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 5/131 (3%)
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL--HIDVFTGSA 324
EA+ + G K + T +LQ GSI++GRE+H RMGL ++ F +
Sbjct: 63 EAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHV---RMGLVHRVNPFVETK 119
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+ MY+KCG LKDAR +F+ + +N+ +W+AMIG Y + +ELF M+ +G+ +
Sbjct: 120 LVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPD 179
Query: 385 EVTLISVLSAC 395
+L AC
Sbjct: 180 AFLFPKILQAC 190
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 13/234 (5%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAG 59
M L F N++++ +L C A ++ K++H + +L + ++ + LV YA
Sbjct: 514 MQSLNFSPNSVTIL---SILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAK 570
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
G++ +R VF+ + + ++ N ++ G A F MR R N+ T + +
Sbjct: 571 SGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASI 630
Query: 120 LKA--CVGLLDIKKGKQV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-F 175
+ A G++D KG+ V ++ + + A++D+Y + G L A M
Sbjct: 631 IHAYGIAGMVD--KGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPI 688
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEP-NQFTYNAIIASYARRG 228
E DV WTS+++ ++ AV+ +R L LEP N Y ++ +YA G
Sbjct: 689 EPDVSIWTSLLTACRFHGNLNLAVLAAKR--LHELEPDNHVIYRLLVQAYALYG 740
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 167/515 (32%), Positives = 275/515 (53%), Gaps = 48/515 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIF-SLKSKLV--GVYAGCGDVNSARLVFDKIPN 75
LL C K++ + K++HALL T ++ ++KSKL+ + D++ + + +PN
Sbjct: 19 LLDGC---KSMFELKRIHALLFTLGISQDETIKSKLLLFSALSPARDLDYSYKLILNVPN 75
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
P F N ++ A + T N +I F M + + T+ ++KA LL+ + G V
Sbjct: 76 PTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKATSKLLNQELGMAV 135
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + G E D + N+LI MY+ C + SAR+VF M +++V
Sbjct: 136 HVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLV--------------- 180
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
T+NA++ YA+ GD N A F+ M + D+V+W+++
Sbjct: 181 --------------------TWNAMLDGYAKCGDLNMAREVFNLMPEK----DVVSWSSL 216
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
I G+ + + EA+ LF+ M G N VT+ L A G+++ GR +H + L
Sbjct: 217 IDGYVKGRVYGEAMALFERMSFDGPMANEVTLVSALCACAHLGALEHGRMMHRYIVENEL 276
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIK--NVASWNAMIGCYGKHGMVDSSIELF 373
+ + ++L+DMY+KCG++ +A T+F ++ +V WNA+IG HG++ ++ LF
Sbjct: 277 PLTIVLQTSLVDMYAKCGAIHEALTVFRACSLQEADVLIWNAIIGGLATHGLIKEAMNLF 336
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
M G+ +E+T + +LS C+HGGLVE+ F ++ ++G+ EHYAC+VD L R
Sbjct: 337 CEMKMVGIVPDEITYLCLLSCCAHGGLVEEAWYFFDCLR-KHGMIPKVEHYACMVDALSR 395
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G++ EAY L Q+P+ T+SM GA +GC HG+ D+A +G E+ +V L
Sbjct: 396 AGQVSEAYQFLCQMPVQPTSSMLGALLSGCMKHGKLDIAKVVGRRLVELDPNHDGRYVGL 455
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
SNI AAD W +A+N+R+ M+ K V+K PGFS +E
Sbjct: 456 SNIYAADKRWDDAKNIREAMERKGVKKSPGFSFIE 490
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 272/541 (50%), Gaps = 42/541 (7%)
Query: 29 LRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
L G+QVH+L+ + ++++ S L+ +YA C V A +VF IP N N ++
Sbjct: 118 LDVGQQVHSLIVKMGYEEHVYA-GSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIA 176
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK----GKQVHAVATQM 142
G+ A M E R + TFS +L LLD KK Q+H +
Sbjct: 177 GFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLT----LLDEKKFYKLTMQLHCKIIKH 232
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMF-ERDVVSWTSMISGYCNVSKVDEAVVL 201
G + D +V NA I YS+CG L A RVF G RD+V+W SM++ + + + A L
Sbjct: 233 GVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKL 292
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP-------------- 247
F M+ G EP+ +TY II++ + + + + + E VP
Sbjct: 293 FLDMQQFGFEPDIYTYTTIISACSHKDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSS 352
Query: 248 ----------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
D V+WN++++GF+Q+ ALKLF M + + ++ + VL
Sbjct: 353 NSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVL 412
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
++ ++Q+G++IH L + G + F S+LI MYSKCG ++DAR FE T +
Sbjct: 413 RSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSI 472
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
+WN+++ Y +HG D ++ LF +M ++ ++ + +T ++ L+ACSH GLVE+G + +SM
Sbjct: 473 TWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSM 532
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
YG+ EHYAC VD+ R+G + EA L+ +P + C G +L
Sbjct: 533 ASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIEL 592
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
A + E+ + +V+LSN+ W E + ++M+E+ V+K PG+S +E +N
Sbjct: 593 AAQVASHLLELEPEEHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVKN 652
Query: 532 E 532
E
Sbjct: 653 E 653
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 211/460 (45%), Gaps = 58/460 (12%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLK--ACVGL 126
+FD++ + + N M+ +G+ A + M+ F + +TF +LK AC
Sbjct: 58 LFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACR 117
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
LD+ G+QVH++ +MG+E V G+AL+DMY+KC + A VF + R+ VSW ++I
Sbjct: 118 LDV--GQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALI 175
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------------- 217
+G+ D A L M+ EG+ + T+
Sbjct: 176 AGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQ 235
Query: 218 ------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
NA I SY++ G A F DLVTWN+M++ F R+ A KL
Sbjct: 236 FDNTVCNATITSYSQCGSLEDAERVFDGAVGS---RDLVTWNSMLAAFLAHDRKETAFKL 292
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY-- 329
F M G +P+ T T ++ A + G+ +H LV + GL V +A+I MY
Sbjct: 293 FLDMQQFGFEPDIYTYTTIISACSHKDN---GKSLHGLVIKRGLEQLVPICNAVIAMYLE 349
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
S S++DA +F K+ SWN+++ + + G +++++LF M + +
Sbjct: 350 SSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFS 409
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQ 446
+VL +CS ++ G +I + + G + + + ++ M + G + +A ++ +
Sbjct: 410 AVLRSCSDLATLQLGQQI-HVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAK 468
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
NS+ A+ HG+ D+A+ + FF+M +K
Sbjct: 469 DSSITWNSIMFAYAQ----HGQGDVALGL---FFQMRDKK 501
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 16/296 (5%)
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFA--FFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
G + + N I++ Y R FA F M+ D VTWN MISG+ S
Sbjct: 29 GRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHR----DTVTWNTMISGYVNSGSLG 84
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
A +L+K M G+ P+ T +L+ + +G+++H+L+ +MG V+ GSAL+
Sbjct: 85 SAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALL 144
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
DMY+KC ++DA +F+ +N SWNA+I + G D++ L M EEG+R ++
Sbjct: 145 DMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDG 204
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T +L+ + +++ + ++GV+ + + G + +A +
Sbjct: 205 TFSPLLTLLDEKKFYKLTMQLHCKII-KHGVQFDNTVCNATITSYSQCGSLEDAERVFDG 263
Query: 447 V----PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+ NSM AF H R++ A + + + G +PD + + I A
Sbjct: 264 AVGSRDLVTWNSMLAAFL----AHDRKETAFKLFLDMQQFGF-EPDIYTYTTIISA 314
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 87/186 (46%), Gaps = 6/186 (3%)
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKC--GSLKDARTLFEITRIKNVASWNAMIGCYGKHG 364
H ++G D++ + ++ Y++C G L A LF+ ++ +WN MI Y G
Sbjct: 22 HCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSG 81
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY 424
+ S+ EL++ M G+ + T S+L + ++ G ++ S+ + G +
Sbjct: 82 SLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQV-HSLIVKMGYEEHVYAG 140
Query: 425 ACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA-GAFRNGCNIHGRRDLAVTMGEEFFEMG 483
+ ++DM + R+ +A+ + + +P NS++ A G + G D A + E G
Sbjct: 141 SALLDMYAKCERVRDAFMVFKCIPR--RNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEG 198
Query: 484 LRKPDG 489
+R DG
Sbjct: 199 VRLDDG 204
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 165/544 (30%), Positives = 270/544 (49%), Gaps = 35/544 (6%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C ALR G+QVH+L + + S L+ +Y+ CG + +A+ VFD++ +P+V
Sbjct: 121 LVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDV 180
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA- 137
++ A G F+ A M + + N+ T + +L AC +L G+Q+H
Sbjct: 181 VGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGY 236
Query: 138 VATQMGFEND-VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ ++G + V ALID YS+ G A+ VF + ++VVSW SM+ Y +++
Sbjct: 237 LIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLE 296
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRG----------------DSNAAFAFFSRM 240
EA+ +F M EG++PN+F + ++ + G D + A S
Sbjct: 297 EALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMY 356
Query: 241 TAEGFV------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
G V PDLV+W IS Q+ +A+ L M G PN +
Sbjct: 357 GRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFS 416
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
VL + S+ G + H L ++G ++ TG+ALI+MYSKCG + AR F++
Sbjct: 417 SVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTH 476
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+V SWN++I + +HG + ++E+F +M G++ ++ T + VL C+H G+VE+G F
Sbjct: 477 DVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFF 536
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
R M ++Y + HYAC++DML R+GR EA ++ +P + C +H
Sbjct: 537 RLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRN 596
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
D+ + E+ R +V++SNI A GEW +A +R+ M E V+K G S +E
Sbjct: 597 LDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIE 656
Query: 529 KRNE 532
NE
Sbjct: 657 INNE 660
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 232/499 (46%), Gaps = 60/499 (12%)
Query: 63 VNSARL-----VFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFT 115
V S RL +FD++P NV + W + S +T G + A+ F+ M E N F
Sbjct: 59 VKSGRLADALDLFDRMPRKNV--VAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFA 116
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+ L AC L ++ G+QVH++A + GF D +G+ LI+MYS+CG L +A+ VF M
Sbjct: 117 CNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMD 176
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------ 223
DVV +TS+IS +C + + A +M +GL+PN+ T I+ +
Sbjct: 177 SPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGY 236
Query: 224 ---------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
Y+R G+ A A F + + ++V+W +M+ + +
Sbjct: 237 LIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCK----NVVSWCSMMQLYIRD 292
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
R EAL++F M+ G+ PN ++ VL G GSI +GR++H + L D+
Sbjct: 293 GRLEEALQVFGDMISEGVDPNEFALSIVL---GACGSIGLGRQLHCSAIKHDLITDIRVS 349
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+AL+ MY + G +++ + ++ SW I ++G + +I L +M EG
Sbjct: 350 NALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFT 409
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE--- 439
N SVLS+C+ +++G++ F + + G +++M + G+M
Sbjct: 410 PNGYAFSSVLSSCADVASLDQGMQ-FHCLALKLGCDSEICTGNALINMYSKCGQMGSARL 468
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--C 497
A+D++ + NS+ +G HG + A+ + + G+ KPD L + C
Sbjct: 469 AFDVMHTHDVTSWNSLI----HGHAQHGDANKALEVFSKMRSNGI-KPDDSTFLGVLMGC 523
Query: 498 AADGEWHEAENLRKIMKEK 516
G E E ++M ++
Sbjct: 524 NHSGMVEEGELFFRLMIDQ 542
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 146/296 (49%), Gaps = 18/296 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +LG C ++ G+Q+H +DL + + L+ +Y G V + +KI
Sbjct: 317 LSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIE 373
Query: 75 NPNVFMLNWMVMASAFTGNFQ-----EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
NP+ +++W +A + NFQ +AI M + N + FS VL +C + +
Sbjct: 374 NPD--LVSW---TTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASL 428
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
+G Q H +A ++G ++++ GNALI+MYSKCG + SAR F M DV SW S+I G+
Sbjct: 429 DQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGH 488
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPD 248
++A+ +F +M+ G++P+ T+ ++ G FF M + F P
Sbjct: 489 AQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPA 548
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
+ MI ++ R +EAL++ M +P+ + +L + L ++ IG+
Sbjct: 549 PSHYACMIDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLASCKLHRNLDIGK 601
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 114/223 (51%), Gaps = 20/223 (8%)
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
G C+ + D + LE N+ + +A A F RM +
Sbjct: 31 GLCSAAAADNGCAESPDVVLECKRLNRLVKSGRLAD---------ALDLFDRMPRK---- 77
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
++V W +++SG+ ++ R AL +F M+ SG+ PN+ L A G+++ G ++H
Sbjct: 78 NVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVH 137
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+L R G D + GS LI+MYS+CGSL A+ +F+ +V + ++I + ++G +
Sbjct: 138 SLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFE 197
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACS-------HGGLVEK 403
+ E +ML++G++ NE T+ ++L+AC HG L++K
Sbjct: 198 LAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKK 240
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 175/547 (31%), Positives = 275/547 (50%), Gaps = 50/547 (9%)
Query: 29 LRQGKQVHALLCTNDLNIF--SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
L++G++VH + T L F + + LV +YA CG + AR VF + + N M+
Sbjct: 49 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMIT 108
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
G F EA+ + MR FT L +C L K G+Q+H + ++G +
Sbjct: 109 GLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 168
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK-VDEAVVLFERM 205
+VSV NAL+ +Y++ G L R++F M E D VSW S+I + + + EAV F
Sbjct: 169 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNA 228
Query: 206 KLEGLEPNQFTY-----------------------------------NAIIASYARRGDS 230
G + N+ T+ NA+IA Y + G+
Sbjct: 229 LRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEM 288
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+ FSRM+ D VTWN+MISG+ ++ +AL L ML +G + ++ V
Sbjct: 289 DGCEKIFSRMSER---RDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 345
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A +++ G E+HA R L DV GSAL+DMYSKCG L A F ++N
Sbjct: 346 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 405
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMR-ANEVTLISVLSACSHGGLVEKGLEIFR 409
SWN+MI Y +HG + +++LF M +G + VT + VLSACSH GL+E+G + F
Sbjct: 406 YSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFE 465
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP----MYVTNSMAGAFRNGCNI 465
SM + YG+ EH++C+ D+L R+G + + D + ++P + + ++ GA C
Sbjct: 466 SMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGAC---CRA 522
Query: 466 HGRR-DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
+GR+ +L E F++ +V+L N+ AA G W + RK MK+ +V+K+ G+
Sbjct: 523 NGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGY 582
Query: 525 SRVEKRN 531
S V ++
Sbjct: 583 SWVTMKD 589
>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 274/546 (50%), Gaps = 49/546 (8%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C + LR+G+ VH L ++ + FS+ + L+ +Y+ C DV A VF IP ++
Sbjct: 288 CAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSW 347
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
N M+ + G+ +EA F + + +C+ T +L +C ++ G+ +H +
Sbjct: 348 NAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLK 407
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKVDEAVV 200
+GF N+ N+L+ MY CG L + + + D+V W ++++G EA+
Sbjct: 408 LGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALK 467
Query: 201 LFERMK------------------------------LEGL------EPNQFTYNAIIASY 224
F M+ L GL E + NA+I Y
Sbjct: 468 AFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMY 527
Query: 225 ARRGDSNAAFAFFSRMTAEGFV--PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
R G+ A F GF +L +WN MIS F+Q+K AL+LF + +P
Sbjct: 528 GRCGEIENARIIF------GFSCNRNLCSWNCMISAFSQNKDGRRALELFCHI---EFEP 578
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N +T+ G+L A G ++ G++IH V R L + F +AL DMYS CG L A +F
Sbjct: 579 NEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIF 638
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ + ++VA+WN+MI +G H +IELF M E G R + T IS+LSACSH GLV
Sbjct: 639 QSSPERSVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVN 698
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+GL + +M E + V+ EH+ C+VDML R+GR+ EAY+ +RQ+P + GA +
Sbjct: 699 EGLWYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSA 758
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C+ HG + + E FE+ ++ LSN+ A G W +A LR+I+++K ++K
Sbjct: 759 CSYHGDLKMGREVAELLFELEPENVGYYISLSNMYVAAGRWKDAVELRRIIQDKGLKKPA 818
Query: 523 GFSRVE 528
+S ++
Sbjct: 819 AYSLID 824
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/521 (27%), Positives = 237/521 (45%), Gaps = 63/521 (12%)
Query: 29 LRQGKQVHAL---LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
L G+ +H L D++ S ++ L+ +Y+ C D+ +A ++F ++ ++ N M+
Sbjct: 190 LSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAML 249
Query: 86 MASAFTGNFQEAIGYFSLMREF----IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
A EA F L+ E + + T I++ C L+ +++G+ VH + +
Sbjct: 250 DGLALNQRIWEA---FDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLR 306
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
D SV N+LIDMYSKC + A VF + ERD+VSW +MISGY EA L
Sbjct: 307 REMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHL 366
Query: 202 FE------------------------------------RMKLEGLEPNQFTYNAIIASYA 225
F ++KL G N N+++ Y
Sbjct: 367 FRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKL-GFANNPLAVNSLMLMYI 425
Query: 226 RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS-GIKPNN 284
GD A F+ ++A D+V WN +++G Q+ EALK F M + ++
Sbjct: 426 NCGDLVACFSLLQTVSA---AADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDS 482
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
V + V+ A G + G +H L + + D+ +ALI MY +CG +++AR +F
Sbjct: 483 VALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGF 542
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+ +N+ SWN MI + ++ ++ELF + E NE+T++ +LSAC+ G++ G
Sbjct: 543 SCNRNLCSWNCMISAFSQNKDGRRALELFCHIEFE---PNEITIVGILSACTQLGVLRHG 599
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRN 461
+I + R ++ + A + DM GR+ A+ + + P + NSM AF
Sbjct: 600 KQIHGHVI-RSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMISAF-- 656
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDG-FVMLSNICAADG 501
H A+ + E E G R F+ L + C+ G
Sbjct: 657 --GFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSG 695
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 219/458 (47%), Gaps = 52/458 (11%)
Query: 50 KSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFI 108
+ L+ Y+ D +S+ +FD+I +V + N M+ AS F A+ F LM E +
Sbjct: 10 STSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGV 69
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ T IV+ A + ++ +G+ +H ++ + G +D + NALIDMY+KCG L S+
Sbjct: 70 -GLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSE 128
Query: 169 RVFHGMFERDVVSWTSMISG--YCNVSK------------------------VDEAVVLF 202
VF GM RD++SW SM+ G Y N K V + +L
Sbjct: 129 CVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLG 188
Query: 203 E------------RMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV 250
E ++ + + N F N++I+ Y++ D AA F M + D+V
Sbjct: 189 ELSFGQVIHGWGIKLGYKDISHNSFE-NSLISLYSQCRDIQAAEILFKEMKYK----DIV 243
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
+WNAM+ G A ++R EA L M + G ++P++VTV ++ ++ GR +H L
Sbjct: 244 SWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGL 303
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
R + +D ++LIDMYSKC +K A +F+ +++ SWNAMI Y ++G +
Sbjct: 304 TLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREA 363
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
LF ++L+ + + TL+++L +C ++ G E + + G + ++
Sbjct: 364 QHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFG-ESIHCWQLKLGFANNPLAVNSLML 422
Query: 430 MLCRSGRMVEAYDLLRQVPMYV-----TNSMAGAFRNG 462
M G +V + LL+ V MAG +NG
Sbjct: 423 MYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNG 460
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 195/417 (46%), Gaps = 45/417 (10%)
Query: 29 LRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L QG+ +H + T L+ L + L+ +YA CG+++S+ VF + ++ N M+
Sbjct: 89 LTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVFGGMEYRDIISWNSMMRG 148
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN- 146
A+ ++++ YF M + + + + + A L ++ G+ +H ++G+++
Sbjct: 149 CAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKDI 208
Query: 147 -DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
S N+LI +YS+C + +A +F M +D+VSW +M+ G ++ EA L M
Sbjct: 209 SHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEM 268
Query: 206 KLEG-LEPNQFTY-----------------------------------NAIIASYARRGD 229
+L G ++P+ T N++I Y++ D
Sbjct: 269 QLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKD 328
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
A F + DLV+WNAMISG++Q+ EA LF+ +L S + + T+
Sbjct: 329 VKRAEHVFKAIPER----DLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLA 384
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE-ITRIK 348
+L + + +Q G IH ++G + ++L+ MY CG L +L + ++
Sbjct: 385 ILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAA 444
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACSHGGLVEKG 404
++ WN ++ ++G +++ F M ++ + + V L +V+SAC + L+ G
Sbjct: 445 DIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAG 501
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 161/343 (46%), Gaps = 27/343 (7%)
Query: 19 LLGKCMKSKALRQGKQVHAL----LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
++ C + L G +H L L +D+ + ++ L+ +Y CG++ +AR++F
Sbjct: 488 VISACGNLELLFAGGSLHGLALKTLMESDIRV---QNALITMYGRCGEIENARIIFGFSC 544
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N N + +W M SAF+ N ++ L + N+ T +L AC L ++ GKQ
Sbjct: 545 NRN--LCSWNCMISAFSQN-KDGRRALELFCHIEFEPNEITIVGILSACTQLGVLRHGKQ 601
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + + + V AL DMYS CG L +A ++F ER V +W SMIS + S
Sbjct: 602 IHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHSN 661
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN- 253
+A+ LF M+ G P + T+ +++++ + G N ++S M E F + T +
Sbjct: 662 GGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGLWYYSNML-ELFNVEADTEHH 720
Query: 254 -AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
M+ ++ R EA + + M +P +L A G +++GRE+ L+
Sbjct: 721 VCMVDMLGRAGRLGEAYEFIRQM---PTQPEPGVWGALLSACSYHGDLKMGREVAELLFE 777
Query: 313 M-----GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
+ G +I +L +MY G KDA L I + K +
Sbjct: 778 LEPENVGYYI------SLSNMYVAAGRWKDAVELRRIIQDKGL 814
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 154/347 (44%), Gaps = 47/347 (13%)
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
MG + +L+ YS+ S+ +F + RDV+ W +MI+ AV L
Sbjct: 1 MGALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNL 60
Query: 202 FERMKLE-----------------------------------GLEPNQFTYNAIIASYAR 226
F + E GL + F NA+I YA+
Sbjct: 61 FVELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAK 120
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G+ +++ F M D+++WN+M+ G A + ++L FK M S + +NV+
Sbjct: 121 CGELSSSECVFGGMEYR----DIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVS 176
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS---ALIDMYSKCGSLKDARTLFE 343
+T + A L G + G+ IH ++G + D+ S +LI +YS+C ++ A LF+
Sbjct: 177 LTCAVSASALLGELSFGQVIHGWGIKLG-YKDISHNSFENSLISLYSQCRDIQAAEILFK 235
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVE 402
+ K++ SWNAM+ + + + +L M G ++ + VT++ ++ C+ L+
Sbjct: 236 EMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLR 295
Query: 403 KGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+G + +++ G+ S + ++DM + + A + + +P
Sbjct: 296 EGRAVHGLTLRREMGLDFSVTN--SLIDMYSKCKDVKRAEHVFKAIP 340
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 139/286 (48%), Gaps = 8/286 (2%)
Query: 216 TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
T +++ +Y+R D ++++A F E D++ WNAMI+ +++ A+ LF +
Sbjct: 9 TSTSLLTAYSRAADFSSSWALFD----EILYRDVILWNAMITASVENQCFGVAVNLFVEL 64
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+ G+ ++ T+ V+ A G++ GR +H + + GL D F +ALIDMY+KCG L
Sbjct: 65 MGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGEL 124
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ +F +++ SWN+M+ + S+ F++M +A+ V+L +SA
Sbjct: 125 SSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSAS 184
Query: 396 SHGGLVEKGLEIFRSMKERYGVK-ISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS 454
+ G + G ++ + G K IS + + L R ++A ++L + Y
Sbjct: 185 ALLGELSFG-QVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIV 243
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNICA 498
A +G ++ R A + E +G +PD V++ +CA
Sbjct: 244 SWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCA 289
>gi|356551872|ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Glycine max]
Length = 945
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/492 (31%), Positives = 274/492 (55%), Gaps = 21/492 (4%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPN----PNVFMLNWMVMASAFT--GNFQEAIGYFSLMRE 106
L+ Y+ G + A + K+ + P+V+ W M S FT G EA F L+R+
Sbjct: 291 LIASYSQLGHCDIAMDLMRKMESFGITPDVY--TWTSMISGFTQKGRINEA---FDLLRD 345
Query: 107 FI---YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
+ N T + AC + + G ++H++A + +D+ +GN+LIDMY+K G
Sbjct: 346 MLIVGVEPNSITIASAASACASVKSLSMGSEIHSIAVKTSMVDDILIGNSLIDMYAKGGD 405
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
L +A+ +F M ERDV SW S+I GYC +A LF +M+ PN T+N +I
Sbjct: 406 LEAAQSIFDVMLERDVYSWNSIIGGYCQAGFCGKAHELFMKMQESDSPPNVVTWNVMITG 465
Query: 224 YARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+ + GD + A F R+ +G + P++ +WN++ISGF Q++++++AL++F+ M S + P
Sbjct: 466 FMQNGDEDEALNLFLRIEKDGKIKPNVASWNSLISGFLQNRQKDKALQIFRQMQFSNMAP 525
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N VTV +L A + + +EIH R L ++ + ID Y+K G++ +R +F
Sbjct: 526 NLVTVLTILPACTNLVAAKKVKEIHCCATRRNLVSELSVSNTFIDSYAKSGNIMYSRKVF 585
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ K++ SWN+++ Y HG +S+++LF++M ++G+ + VTL S++SA SH +V+
Sbjct: 586 DGLSPKDIISWNSLLSGYVLHGCSESALDLFDQMRKDGLHPSRVTLTSIISAYSHAEMVD 645
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G F ++ E Y +++ EHY+ +V +L RSG++ +A + ++ +P+ +S+ A
Sbjct: 646 EGKHAFSNISEEYQIRLDLEHYSAMVYLLGRSGKLAKALEFIQNMPVEPNSSVWAALLTA 705
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFV---MLSNICAADGEWHEAENLRKIMKEKNVQ 519
C IH +A+ GE E+ P+ + +LS + G+ EA+ + K+ KEK V+
Sbjct: 706 CRIHKNFGMAIFAGEHMLEL---DPENIITQHLLSQAYSVCGKSWEAQKMTKLEKEKFVK 762
Query: 520 KQPGFSRVEKRN 531
G S +E N
Sbjct: 763 MPVGQSWIEMNN 774
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 243/430 (56%), Gaps = 2/430 (0%)
Query: 19 LLGKCMKSKALRQGKQVHALL-CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C+ + G+++H + +N F +++KLV +YA CG ++ AR VFD++ N
Sbjct: 90 LLQACIDKDCILVGRELHTRIGLVRKVNPF-VETKLVSMYAKCGHLDEARKVFDEMRERN 148
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+F + M+ A + ++E + F M + + F VLKAC DI+ G+ +H+
Sbjct: 149 LFTWSAMIGACSRDLKWEEVVELFYDMMQHGVLPDDFLLPKVLKACGKFRDIETGRLIHS 208
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ + G + + V N+++ +Y+KCG + A ++F M ER+ VSW +I+GYC ++++
Sbjct: 209 LVIRGGMCSSLHVNNSILAVYAKCGEMSCAEKIFRRMDERNCVSWNVIITGYCQRGEIEQ 268
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
A F+ M+ EG+EP T+N +IASY++ G + A +M + G PD+ TW +MIS
Sbjct: 269 AQKYFDAMQEEGMEPGLVTWNILIASYSQLGHCDIAMDLMRKMESFGITPDVYTWTSMIS 328
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
GF Q R NEA L + ML+ G++PN++T+ A S+ +G EIH++ + +
Sbjct: 329 GFTQKGRINEAFDLLRDMLIVGVEPNSITIASAASACASVKSLSMGSEIHSIAVKTSMVD 388
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
D+ G++LIDMY+K G L+ A+++F++ ++V SWN++IG Y + G + ELF +M
Sbjct: 389 DILIGNSLIDMYAKGGDLEAAQSIFDVMLERDVYSWNSIIGGYCQAGFCGKAHELFMKMQ 448
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
E N VT +++ G ++ L +F +++ +K + + ++ ++ +
Sbjct: 449 ESDSPPNVVTWNVMITGFMQNGDEDEALNLFLRIEKDGKIKPNVASWNSLISGFLQNRQK 508
Query: 438 VEAYDLLRQV 447
+A + RQ+
Sbjct: 509 DKALQIFRQM 518
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 6/184 (3%)
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL--HIDVFTGS 323
+EA+ + + G K +T +LQA I +GRE+H R+GL ++ F +
Sbjct: 66 SEAVAILDSLAQQGSKVRPITFMNLLQACIDKDCILVGRELHT---RIGLVRKVNPFVET 122
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
L+ MY+KCG L +AR +F+ R +N+ +W+AMIG + + +ELF M++ G+
Sbjct: 123 KLVSMYAKCGHLDEARKVFDEMRERNLFTWSAMIGACSRDLKWEEVVELFYDMMQHGVLP 182
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
++ L VL AC +E G + S+ R G+ S ++ + + G M A +
Sbjct: 183 DDFLLPKVLKACGKFRDIETG-RLIHSLVIRGGMCSSLHVNNSILAVYAKCGEMSCAEKI 241
Query: 444 LRQV 447
R++
Sbjct: 242 FRRM 245
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 115/264 (43%), Gaps = 18/264 (6%)
Query: 9 NNLSVNYLDCL--LGKCMKSKALRQGKQVHALLCTNDLNI---FSLKSKLVGVYAGCGDV 63
+N++ N + L L C A ++ K++H C N+ S+ + + YA G++
Sbjct: 521 SNMAPNLVTVLTILPACTNLVAAKKVKEIHC--CATRRNLVSELSVSNTFIDSYAKSGNI 578
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
+R VFD + ++ N ++ G + A+ F MR+ ++ T + ++ A
Sbjct: 579 MYSRKVFDGLSPKDIISWNSLLSGYVLHGCSESALDLFDQMRKDGLHPSRVTLTSIISAY 638
Query: 124 VGLLDIKKGKQVHA-VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVS 181
+ +GK + ++ + D+ +A++ + + G L A M E +
Sbjct: 639 SHAEMVDEGKHAFSNISEEYQIRLDLEHYSAMVYLLGRSGKLAKALEFIQNMPVEPNSSV 698
Query: 182 WTSMISGYCNVSKVDEAVVLFERMKLEGLEP-NQFTYNAIIASYARRGDSNAAFAFFSRM 240
W ++++ C + K + + +F + L+P N T + + +Y+ G S A +++
Sbjct: 699 WAALLTA-CRIHK-NFGMAIFAGEHMLELDPENIITQHLLSQAYSVCGKSWEA-QKMTKL 755
Query: 241 TAEGFV--PDLVTW---NAMISGF 259
E FV P +W N M+ F
Sbjct: 756 EKEKFVKMPVGQSWIEMNNMVHTF 779
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/558 (29%), Positives = 260/558 (46%), Gaps = 43/558 (7%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVF 70
+SV C LG + L G V + L +N + S LV +Y G VF
Sbjct: 154 VSVALKACALGMNVYFGELLHGFSVKSGL----INSVFVSSALVDMYMKVGKTEQGCSVF 209
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ + NV +++ G + + YFS M + TF++ LKA +
Sbjct: 210 ENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLH 269
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
GK +HA + GF V N L MYSKC R+F M DVVSWT++I Y
Sbjct: 270 YGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYV 329
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
+ + A+ F+RM+ + PN++T+
Sbjct: 330 QMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALS 389
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
N+II Y++ G A F MT + D+++W+ +IS + Q EA M
Sbjct: 390 VSNSIITLYSKCGLLQEASLVFDGMTRK----DIISWSTIISVYCQGSHAKEAFNYLSWM 445
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
G KPN + VL G ++ G+++HA +GL + SALI MYS+ G+L
Sbjct: 446 SREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNL 505
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
++A +F+ + ++ SW AMI Y +HG +I LFE + G+ + VT I +L+AC
Sbjct: 506 QEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTAC 565
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
+H GLV+ G ++ M Y + SKEHY C++D+LCR+GR+ EA ++R +P + +
Sbjct: 566 NHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVV 625
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
C HG D A+ E+ + + L+NI +A G EA ++RK+MK
Sbjct: 626 WSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKS 685
Query: 516 KNVQKQPGFSRVEKRNEF 533
K V K+PG+S + ++
Sbjct: 686 KGVIKEPGWSWINSNDQL 703
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 133/292 (45%), Gaps = 40/292 (13%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE-GL 210
N+ + K G +C AR +F+ M RD +SWT++I+GY N + +EA++LF M ++ GL
Sbjct: 88 NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147
Query: 211 EPNQFTY-----------------------------------NAIIASYARRGDSNAAFA 235
+ +QF +A++ Y + G + +
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F MT ++V+W A+I G + + L F M S + ++ T L+A
Sbjct: 208 VFENMTTR----NVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASA 263
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
+G + G+ IHA + G + + + L MYSKC LF +V SW
Sbjct: 264 ESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTN 323
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
+I Y + G + +++ F+RM + + NE T SV+SAC++ + + G +I
Sbjct: 324 LIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQI 375
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 164/541 (30%), Positives = 269/541 (49%), Gaps = 35/541 (6%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C ALR G+QVH+L + + S L+ +Y+ CG + +A+ VFD++ +P+V
Sbjct: 51 CADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGY 110
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA-VAT 140
++ A G F+ A M + + N+ T + +L AC +L G+Q+H +
Sbjct: 111 TSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLIK 166
Query: 141 QMGFEND-VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
++G + V ALID YS+ G A+ VF + ++VVSW SM+ Y +++EA+
Sbjct: 167 KIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEAL 226
Query: 200 VLFERMKLEGLEPNQFTYNAIIASYARRG----------------DSNAAFAFFSRMTAE 243
+F M EG++PN+F + ++ + G D + A S
Sbjct: 227 QVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRT 286
Query: 244 GFV------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
G V PDLV+W IS Q+ +A+ L M G PN + VL
Sbjct: 287 GLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVL 346
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
+ S+ G + H L ++G ++ TG+ALI+MYSKCG + AR F++ +V
Sbjct: 347 SSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVT 406
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SWN++I + +HG + ++E+F +M G++ ++ T + VL C+H G+VE+G FR M
Sbjct: 407 SWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLM 466
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
++Y + HYAC++DML R+GR EA ++ +P + C +H D+
Sbjct: 467 IDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDI 526
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+ E+ R +V++SNI A GEW +A +R+ M E V+K G S +E N
Sbjct: 527 GKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINN 586
Query: 532 E 532
E
Sbjct: 587 E 587
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 224/484 (46%), Gaps = 55/484 (11%)
Query: 73 IPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+P NV + W + S +T G + A+ F+ M E N F + L AC L ++
Sbjct: 1 MPRKNV--VAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALR 58
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
G+QVH++A + GF D +G+ LI+MYS+CG L +A+ VF M DVV +TS+IS +C
Sbjct: 59 AGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFC 118
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS--------------------------- 223
+ + A +M +GL+PN+ T I+ +
Sbjct: 119 RNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSS 178
Query: 224 ------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
Y+R G+ A A F + + ++V+W +M+ + + R EAL++F M+
Sbjct: 179 TALIDFYSRNGEFKLAKAVFDSLHCK----NVVSWCSMMQLYIRDGRLEEALQVFGDMIS 234
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G+ PN ++ VL G GSI +GR++H + L D+ +AL+ MY + G +++
Sbjct: 235 EGVDPNEFALSIVL---GACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEE 291
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+ ++ SW I ++G + +I L +M EG N SVLS+C+
Sbjct: 292 LEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCAD 351
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE---AYDLLRQVPMYVTNS 454
+++G++ F + + G +++M + G+M A+D++ + NS
Sbjct: 352 VASLDQGMQ-FHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNS 410
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRKI 512
+ +G HG + A+ + + G+ KPD L + C G E E ++
Sbjct: 411 LI----HGHAQHGDANKALEVFSKMRSNGI-KPDDSTFLGVLMGCNHSGMVEEGELFFRL 465
Query: 513 MKEK 516
M ++
Sbjct: 466 MIDQ 469
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 146/296 (49%), Gaps = 18/296 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +LG C ++ G+Q+H +DL + + L+ +Y G V + +KI
Sbjct: 244 LSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIE 300
Query: 75 NPNVFMLNWMVMASAFTGNFQ-----EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
NP+ +++W +A + NFQ +AI M + N + FS VL +C + +
Sbjct: 301 NPD--LVSW---TTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASL 355
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
+G Q H +A ++G ++++ GNALI+MYSKCG + SAR F M DV SW S+I G+
Sbjct: 356 DQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGH 415
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPD 248
++A+ +F +M+ G++P+ T+ ++ G FF M + F P
Sbjct: 416 AQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPA 475
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
+ MI ++ R +EAL++ M +P+ + +L + L ++ IG+
Sbjct: 476 PSHYACMIDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLASCKLHRNLDIGK 528
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 164/524 (31%), Positives = 273/524 (52%), Gaps = 16/524 (3%)
Query: 10 NLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI---FSLKSKLVGVYAGCGDVNSA 66
+++++ LL C K LR Q+H L ++ F+ K L + + A
Sbjct: 2 TIAIHHCLSLLNSC---KNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYA 58
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVG 125
R + P P+ FM N +V + + ++ F +MR+ + F+F+ V+KA
Sbjct: 59 RRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVEN 118
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
++ G Q+H A + G E+ + VG LI MY CG + AR+VF M + ++V+W ++
Sbjct: 119 FRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAV 178
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
I+ + V A +F++M L N ++N ++A Y + G+ +A FS M
Sbjct: 179 ITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHR-- 232
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
D V+W+ MI G A + NE+ F+ + +G+ PN V++TGVL A +GS + G+
Sbjct: 233 --DDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKI 290
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN-VASWNAMIGCYGKHG 364
+H V + G V +ALIDMYS+CG++ AR +FE + K + SW +MI HG
Sbjct: 291 LHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHG 350
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY 424
+ ++ LF M G+ + ++ IS+L ACSH GL+E+G + F MK Y ++ EHY
Sbjct: 351 QGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHY 410
Query: 425 ACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
C+VD+ RSG++ +AYD + Q+P+ T + C+ HG +LA + + E+
Sbjct: 411 GCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDP 470
Query: 485 RKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
V+LSN A G+W + ++RK M + ++K +S VE
Sbjct: 471 NNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVE 514
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/515 (31%), Positives = 265/515 (51%), Gaps = 53/515 (10%)
Query: 30 RQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARL-----VFDKIPNPNVFMLN 82
R K +HA + L ++F+ S+L+ A C D + L V +I NPN+F+ N
Sbjct: 31 RDLKIIHAHMLRTHLFFDVFA-ASRLI---AFCIDSTTNLLHYAIRVASQIQNPNLFIYN 86
Query: 83 WMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
++ + + N + + Y+ F + T ++KAC L + G Q H A +
Sbjct: 87 ALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKH 146
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
GFE D V N+L+ MY+ G + +AR VF M DVVSWT MI+G
Sbjct: 147 GFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAG-------------- 192
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
Y R GD+ +A F RM +LVTW+ MISG+A++
Sbjct: 193 ---------------------YHRCGDAKSARELFDRMPER----NLVTWSTMISGYARN 227
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
+A++ F+ + G+ N + GV+ + G++ +G + H V R L +++ G
Sbjct: 228 NCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILG 287
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+A++DMY++CG+++ A +FE K+V W A+I HG + ++ F M ++G
Sbjct: 288 TAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFV 347
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
++T +VL+ACSH G+VE+GLEIF SMK +GV+ EHY C+VD+L R+G++ +A
Sbjct: 348 PRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEK 407
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
+ ++P+ + A C IH ++ +G+ EM +V+LSNI A +
Sbjct: 408 FVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANK 467
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFV 534
W + +R++MK+K V+K PG+S +E K +EF
Sbjct: 468 WKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFT 502
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 159/369 (43%), Gaps = 45/369 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLV-------- 69
L+ C + + G Q H + F +++ LV +YA GD+N+AR V
Sbjct: 123 LVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFD 182
Query: 70 -----------------------FDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLM 104
FD++P N ++ W M S + N F++A+ F +
Sbjct: 183 VVSWTCMIAGYHRCGDAKSARELFDRMPERN--LVTWSTMISGYARNNCFEKAVETFEAL 240
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
+ N+ V+ +C L + G++ H + ++ +G A++DMY++CG +
Sbjct: 241 QAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNV 300
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
A VF + E+DV+ WT++I+G ++A+ F M +G P T+ A++ +
Sbjct: 301 EKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTAC 360
Query: 225 ARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+ G F M + G P L + M+ ++ + +A K M V KPN
Sbjct: 361 SHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPV---KPN 417
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI--DMYSKCGSLKDARTL 341
+L A + ++++G + ++ M ++G ++ ++Y++ KD +
Sbjct: 418 APIWRALLGACRIHKNVEVGERVGKILLEMQPE---YSGHYVLLSNIYARANKWKDVTVM 474
Query: 342 FEITRIKNV 350
++ + K V
Sbjct: 475 RQMMKDKGV 483
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 264/507 (52%), Gaps = 39/507 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEA------------IGY 100
++ +A G V+ AR FD P + N M+ A G QEA I +
Sbjct: 206 MISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISW 265
Query: 101 FSLMREFIYRC---------NKF------TFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
+LM ++ R NK +++ ++ D+ + +++ VA
Sbjct: 266 NALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPI---- 321
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
DV A++ Y++ G+L A+RVF M +++ VSW +M++ Y ++EA LF+ M
Sbjct: 322 RDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAM 381
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
N ++N ++ YA+ G + A A F M + D V+W AM++ ++Q
Sbjct: 382 PCR----NVASWNTMLTGYAQAGMLDEARAIFGMMPQK----DAVSWAAMLAAYSQIGFS 433
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
E L+LFK M G N VL +++ G ++H+ + + G + F G+AL
Sbjct: 434 EETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNAL 493
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
+ MY KCGS+++A + FE ++V SWN MI Y +HG ++E+F+ M + + ++
Sbjct: 494 LAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDD 553
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
+TL+ VL+ACSH GLVEKG+ F SM +GV EHY C++D+L R+GR+ EA +L++
Sbjct: 554 ITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMK 613
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
+P ++M GA IH +L E+ FE+ +V+LSNI A+ G+W +
Sbjct: 614 DMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRD 673
Query: 506 AENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ +R IM E+ V+K PGFS +E +N+
Sbjct: 674 VDKMRHIMHERGVKKVPGFSWIEVQNK 700
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 186/382 (48%), Gaps = 35/382 (9%)
Query: 50 KSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIY 109
+++ + + G V A +F +P + N M+ A G +A+ +F I
Sbjct: 110 RNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFF----RSIP 165
Query: 110 RCNKFTFSIVLKA---CVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
R + F+++ +L A L D++ A+ +M ++ VS N +I ++ GL+
Sbjct: 166 RPDSFSYNTLLHALGVSSSLADVR------ALFDEMPVKDSVSY-NVMISSHANHGLVSL 218
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
AR F E+D VSW M++ Y ++ EA LF+ E + ++NA++A Y +
Sbjct: 219 ARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFD----SRTEWDAISWNALMAGYVQ 274
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
R A F++M D+V+WN M+SG+A+ EA +LF + +
Sbjct: 275 RSQIEEAQKMFNKMPQR----DVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAI 330
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
V+G Q G L + R A+ + + + +A++ Y + +++A+ LF+
Sbjct: 331 VSGYAQNGMLE---EAKRVFDAMPDK-----NAVSWNAMMAAYVQRRMMEEAKELFDAMP 382
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+NVASWN M+ Y + GM+D + +F M ++ + V+ ++L+A S G E+ L+
Sbjct: 383 CRNVASWNTMLTGYAQAGMLDEARAIFGMMPQK----DAVSWAAMLAAYSQIGFSEETLQ 438
Query: 407 IFRSMKERYGVKISKEHYACVV 428
+F+ M R G +++ +ACV+
Sbjct: 439 LFKEMG-RCGEWVNRSAFACVL 459
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 3/172 (1%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C AL G Q+H+ L + + + L+ +Y CG + A F+++
Sbjct: 457 CVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEER 516
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQV 135
+V N M+ A G +EA+ F MR+ + + T VL AC ++KG
Sbjct: 517 DVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYF 576
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMI 186
+++ G +ID+ + G L A + M FE D W +++
Sbjct: 577 YSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALL 628
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 179/551 (32%), Positives = 276/551 (50%), Gaps = 32/551 (5%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLC----TNDLNIFSLKSKLVGV 56
MN L+F N S Y + + K++R+ KQVHA L T+D N + + +
Sbjct: 1 MNALMFQPNTASY-YPRLDVPQIKACKSMRELKQVHAFLVKTGQTHD-NAIATEILRLSA 58
Query: 57 YAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKF 114
+ D+ A VFD++P N F N ++ A A T + + + ++ E N+F
Sbjct: 59 TSDFRDIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQF 118
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
TF VLKAC + + +GKQVH + + G +D V L+ MY CG + A +F
Sbjct: 119 TFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLF--- 175
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
Y NV VD+ L + G E N N ++ YAR G+ AA
Sbjct: 176 --------------YRNVEGVDDVRNLVRDER--GREFNVVLCNVMVDGYARVGNLKAAR 219
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGVLQA 293
F RM +V+WN MISG+AQ+ EA+++F M+ G + PN VT+ VL A
Sbjct: 220 ELFDRMAQRS----VVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPA 275
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
G +++G+ +H + + ID GSAL+DMY+KCGS++ A +FE NV +W
Sbjct: 276 ISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITW 335
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
NA+IG HG + RM + G+ ++VT I++LSACSH GLV++G F M
Sbjct: 336 NAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVN 395
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAV 473
G+K EHY C+VD+L R+G + EA +L+ +PM + + A +H + +
Sbjct: 396 SVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGM 455
Query: 474 TMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
E +M +V LSN+ A+ G W +R +MK+ +++K PG S +E
Sbjct: 456 RAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVI 515
Query: 534 VEKEVQNESKA 544
E V+++S +
Sbjct: 516 HEFLVEDDSHS 526
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 166/546 (30%), Positives = 276/546 (50%), Gaps = 39/546 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C ++ LR G+ +HA L + S L + L+ +Y+ C DV SA +FD +P PN
Sbjct: 24 LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83
Query: 78 VFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+++W + S T N ++A+ FS M +F S +A L G Q+
Sbjct: 84 --LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQL 141
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H V ++GF+ ++ V + L DMYSK GLL A RVF M ++D V+WT+MI GY +
Sbjct: 142 HCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNL 201
Query: 196 DEAVVLFERMKLEGL-EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
+ AV+ F M+ EGL +Q +++++ D A A S + GF ++ NA
Sbjct: 202 EAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNA 261
Query: 255 M--------------------------------ISGFAQSKRENEALKLFKGMLVSGIKP 282
+ I G+ ++ +AL +F + G++P
Sbjct: 262 LTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEP 321
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N T + +++ + ++ G ++HA V + L D F S L+DMY KCG + + LF
Sbjct: 322 NEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLF 381
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ +WNA I +HG +I F+RM G+R N +T +S+L+ACSH GLV+
Sbjct: 382 KEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVD 441
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+GL+ F SMK+ +G++ EHY+C++DM R+GR+ EA + ++P+ +
Sbjct: 442 EGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGA 501
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C + G ++L + ++ V LS I A+ G+W + + +RK+M++ ++K P
Sbjct: 502 CRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLP 561
Query: 523 GFSRVE 528
GFS V+
Sbjct: 562 GFSWVD 567
>gi|15240281|ref|NP_198573.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g37570
gi|9757967|dbj|BAB08303.1| unnamed protein product [Arabidopsis thaliana]
gi|332006824|gb|AED94207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 550
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/490 (30%), Positives = 254/490 (51%), Gaps = 33/490 (6%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLL 127
VF+++P+P ++ N ++ + F E + +MR + R +++TF +V+K C
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
++ G VH + ++GF+ DV VG + +D Y KC L SAR+VF M ER+ VSWT+++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
Y +++EA +F+ M E N ++NA++ + GD A F M +
Sbjct: 185 AYVKSGELEEAKSMFDLMP----ERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIIS 240
Query: 248 ---------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
D+ W+A+I G+AQ+ + NEA K+F M +
Sbjct: 241 YTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNV 300
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHA-LVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
KP+ + G++ A G ++ ++ + L RM + ALIDM +KCG + A
Sbjct: 301 KPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAA 360
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
LFE +++ S+ +M+ HG +I LFE+M++EG+ +EV +L C
Sbjct: 361 KLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSR 420
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVE+GL F M+++Y + S +HY+C+V++L R+G++ EAY+L++ +P S G+
Sbjct: 421 LVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSL 480
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
GC++HG ++A + FE+ + +V+LSNI AA W + +LR M E +
Sbjct: 481 LGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGIT 540
Query: 520 KQPGFSRVEK 529
K G S + +
Sbjct: 541 KICGRSWISR 550
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 176/595 (29%), Positives = 282/595 (47%), Gaps = 67/595 (11%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSA 66
P + +V+ + +L K K+L KQ+HA + +N ++ S
Sbjct: 6 PRPSFAVSAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSY 65
Query: 67 RL-VFDKI-PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
L +F I P P + N ++ + +G + I ++ +R R ++ +F +LKA
Sbjct: 66 ALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVS 125
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
+ + +G ++H A ++ +D V L+DMY+ CG + AR VF M +RDVV+W +
Sbjct: 126 KVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNT 185
Query: 185 MISGYCNVSKVDEAVVLFERMKLEGLEPNQFT---------------YN----------- 218
MI YC +DEA LFE MK + P++ YN
Sbjct: 186 MIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEND 245
Query: 219 ---------AIIASYARRGDSNAAFAFFSRMTAEGF------------------------ 245
A++ YA G + A FF +M+
Sbjct: 246 VRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFD 305
Query: 246 ---VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI 302
+ DLV W MIS +A+S EAL++F+ M SGIKP+ VT+ V+ A G++
Sbjct: 306 QTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDK 365
Query: 303 GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGK 362
+ +H GL + +ALI+MY+KCG L AR +FE +NV SW++MI +
Sbjct: 366 AKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAM 425
Query: 363 HGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
HG S+ LF +M +E + NEVT + VL CSH GLVE+G +IF SM + Y + E
Sbjct: 426 HGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIE 485
Query: 423 HYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM 482
HY C+VD+ R+ + EA +++ +PM + G+ + C +HG +L + ++
Sbjct: 486 HYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKL 545
Query: 483 GLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFV 534
V++SNI A + W +R IM++K V K+ G SR++ K +EF+
Sbjct: 546 EPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFL 600
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 177/605 (29%), Positives = 292/605 (48%), Gaps = 71/605 (11%)
Query: 8 INNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSA 66
+N L L+ C + LRQ KQ+HA + + L + L SKL+ Y+ + A
Sbjct: 29 VNGLDYGAFGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEA 88
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTG---NFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
VFDKI + N+F N M++ + + + + + FT + VLKA
Sbjct: 89 HKVFDKILDKNIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKAL 148
Query: 124 VGLL-DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
L D K+V + GF++D+ V NALI YS+C AR +F M +RD+VSW
Sbjct: 149 SVLFPDSILAKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSW 208
Query: 183 TSMISGYCNVSKVDEAVVLFERM-KLEGLEPNQFT------------------------- 216
SMI+GY ++ L+ +M GL PN T
Sbjct: 209 NSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFII 268
Query: 217 ----------YNAIIASYARRGDSNAAFAFFSRMT---------------AEGFV----- 246
+N++I YA+ G + A F+ M+ GFV
Sbjct: 269 ERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMD 328
Query: 247 -------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
P L TWNA+ISG Q+ L+L + M G +PN VT++ +L +
Sbjct: 329 LFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSN 388
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
++ G+ IHA R G +++ +++ID Y+K G L+ A+ +F+ ++ +++ W A+I
Sbjct: 389 LKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISA 448
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
Y HG ++++ LF ML G + + VT +VL+AC+H G+V + +IF M +YG +
Sbjct: 449 YSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQP 508
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEF 479
EHYAC+V +L R+G + EA + + ++P+ + GA NG ++ G +L + +
Sbjct: 509 CVEHYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFVCDHL 568
Query: 480 FEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR---NEFVEK 536
F M +V+++N+ + G W EAEN+R+ MK+ ++K PG S +E F+ +
Sbjct: 569 FNMEPENTGNYVIMANLYSQAGRWEEAENIREKMKKIGLKKIPGTSWIETSGGLRSFIAR 628
Query: 537 EVQNE 541
+V +E
Sbjct: 629 DVSSE 633
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 160/513 (31%), Positives = 273/513 (53%), Gaps = 35/513 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
+ G+C+ A++ G L C+ ++S L+ +Y+ CG+V A F ++ + +V
Sbjct: 252 IAGRCLHGLAVKTG-----LGCSQ-----VVQSSLLSMYSKCGNVEEAHNSFCQVVDKDV 301
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
F ++ A G E + F M+ + S +L + +++GK H +
Sbjct: 302 FSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHGL 361
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY--CNVSK-- 194
+ + D +V NAL+ MY K G L A ++F G+ E SW +M+ GY C + K
Sbjct: 362 IVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSKESWNTMVFGYVHCYIIKNS 421
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
VDE V + N++I Y + G+ + A+ F R D+VTWN
Sbjct: 422 VDEDVSI---------------ANSLIDMYGKGGNLSIAWKMFCRTQR-----DVVTWNT 461
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
+IS + S EA+ LF M+ + PN+ T+ VL A S++ G+ +H + G
Sbjct: 462 LISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGG 521
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
++V G+AL+DMY+KCG L+ +R LF + K+V SWN MI YG HG +S++E+F+
Sbjct: 522 FELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQ 581
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
+M + ++ N +T +S+LSAC+H G V++G ++F M + Y +K + +H+AC+ D+L RS
Sbjct: 582 QMEQSNVKPNAITFLSLLSACTHAGYVDEGKQLFDRM-QYYSIKPNLKHFACMADLLGRS 640
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
G + EA DL++ +P+ + G + C IH ++ + + + E ++MLS
Sbjct: 641 GNLQEAEDLVQSMPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDPENDGYYIMLS 700
Query: 495 NICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
N+ + G+W EAE R++MKE+ + K+ G+S V
Sbjct: 701 NMYGSMGKWDEAERARELMKERGIGKRAGWSAV 733
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 148/610 (24%), Positives = 272/610 (44%), Gaps = 113/610 (18%)
Query: 12 SVNYLDCLLGKCM--KSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSAR 67
S NYL+C + + +++ L+ + HAL+ T N N+F + SKL+ +YA +S+
Sbjct: 26 SSNYLNCHIDSFLSNQTQTLQSLHKSHALIITTGNANNVF-ISSKLISLYASFRKPHSST 84
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
VFD + F+ N ++ + GN+ +A ++ MR N+FT +++ C LL
Sbjct: 85 YVFDSTNQKDTFLWNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELL 144
Query: 128 DIKKGKQVHAVATQMG-FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
+++GK +H + ++ G F + +VG++ + MY+KCG++ A +F + RDVVSWT+++
Sbjct: 145 WLEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALV 204
Query: 187 SGYCNVSKVDEAVVLFERMK-------------LE------------------------- 208
GY + ++ + M+ LE
Sbjct: 205 IGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKT 264
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
GL +Q +++++ Y++ G+ A F ++ + D+ +W ++I A+ NE
Sbjct: 265 GLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDK----DVFSWTSVIGVCARFGFMNEC 320
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L LF M V + P+ + V+ +L G + ++ G+ H L+ R +D +AL+ M
Sbjct: 321 LNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSM 380
Query: 329 YSKCGSLKDARTLFEITR-------------------IKN-------------------- 349
Y K G+L A LF+ IKN
Sbjct: 381 YCKFGTLNPAEKLFDGVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGG 440
Query: 350 ---------------VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
V +WN +I Y G +I LF+ M+ E + N TL+ VLSA
Sbjct: 441 NLSIAWKMFCRTQRDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSA 500
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL---LRQVPMYV 451
C H +EKG + + +KE G +++ +VDM + G++ ++ +L +++ +
Sbjct: 501 CCHLPSLEKGKMVHQYIKEG-GFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVIS 559
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICAADGEWHEAENL 509
N M +G +HG + A+ + ++ E KP+ LS + C G E + L
Sbjct: 560 WNVMI----SGYGLHGDANSAMEVFQQ-MEQSNVKPNAITFLSLLSACTHAGYVDEGKQL 614
Query: 510 RKIMKEKNVQ 519
M+ +++
Sbjct: 615 FDRMQYYSIK 624
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 229/438 (52%), Gaps = 40/438 (9%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC-VGLLDIKKGKQVHAVATQMGFENDVSV 150
G F E+ G F M T+ VL AC G D+ G QVH G D+ V
Sbjct: 101 GRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRV 160
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
NAL+DMY++C + SA +VF GM R VVSWTS++SG + +VDEA LF+RM
Sbjct: 161 ENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRM----- 215
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
P + D V+W AMI G+ + R EAL+
Sbjct: 216 -PER---------------------------------DTVSWTAMIDGYVWAARFREALE 241
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
+F+ M S + + T+ V+ A G++++G + + R G+ +D F G+ALIDMYS
Sbjct: 242 MFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYS 301
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
KCGS++ A +F+ ++ +W A+I +G + +IE+F RM+ +EVT I
Sbjct: 302 KCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIG 361
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY 450
VL+AC+H GLV+KG E F SM E Y + + HY C++D+L R+G++ EA D + Q+PM
Sbjct: 362 VLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMT 421
Query: 451 VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR 510
+++ G C +HG ++ + E E+ +++LSNI A W + LR
Sbjct: 422 PNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLR 481
Query: 511 KIMKEKNVQKQPGFSRVE 528
+ EK ++K+PG S +E
Sbjct: 482 HAIMEKGIKKEPGCSLIE 499
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 145/301 (48%), Gaps = 12/301 (3%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
++ S S L G+ A G V+ AR +FD++P + M+ + F+EA+ F M
Sbjct: 188 SVVSWTSLLSGL-ARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREM 246
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
+ ++FT V+ AC L ++ G+ V ++ G + D VGNALIDMYSKCG +
Sbjct: 247 QYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSI 306
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
A VF GM RD +WT++I G +EA+ +F RM P++ T+ ++ +
Sbjct: 307 ERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTAC 366
Query: 225 ARRGDSNAAFAFF-SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
G + FF S + A P++V + +I ++ + EAL M ++ PN
Sbjct: 367 THAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMT---PN 423
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI---DMYSKCGSLKDART 340
+ +L A + G+ +IG LV L +D I ++Y+KC +D R
Sbjct: 424 STIWGTLLAACRVHGNSEIGE----LVAERLLELDPENSMVYILLSNIYAKCNRWEDVRR 479
Query: 341 L 341
L
Sbjct: 480 L 480
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 131/320 (40%), Gaps = 76/320 (23%)
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYAR----RGDSNAAFAFFSRMTAEGF------ 245
++AV + RM G P+ +T+ A++ + AR G + A A + + G
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 246 -----------------------VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
V WNA+ISG + R E+ F M +G P
Sbjct: 61 ASSLVAAYTAGGDGAAARALVGECDTPVAWNALISGHNRGGRFGESCGSFVDMARAGAAP 120
Query: 283 NNVTVTGVLQAGG------LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
VT VL A G L G GR V G+ D+ +AL+DMY++C +
Sbjct: 121 TPVTYVSVLSACGKGTRDVLLGMQVHGR-----VVGSGVLPDLRVENALVDMYAECADMG 175
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE----------------- 379
A +F+ ++++V SW +++ + G VD + +LF+RM E
Sbjct: 176 SAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAAR 235
Query: 380 --------------GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
+ A+E T++SV++AC+ G +E G E R R G+K+
Sbjct: 236 FREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMG-EWVRVYMSRQGIKMDAFVGN 294
Query: 426 CVVDMLCRSGRMVEAYDLLR 445
++DM + G + A D+ +
Sbjct: 295 ALIDMYSKCGSIERALDVFK 314
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 121/292 (41%), Gaps = 45/292 (15%)
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQA----GGLTGSIQIGREIHALVCRMGLHIDVFTG 322
+A+ + ML G +P+ T +L+A G +GS R +HA V R+G+ +
Sbjct: 2 DAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVA 61
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
S+L+ Y+ G AR L + +WNA+I + + G S F M G
Sbjct: 62 SSLVAAYTAGGDGAAARAL--VGECDTPVAWNALISGHNRGGRFGESCGSFVDMARAGAA 119
Query: 383 ANEVTLISVLSACS------------HGGLVEKG----LEIFRSMKERY----------- 415
VT +SVLSAC HG +V G L + ++ + Y
Sbjct: 120 PTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWK 179
Query: 416 ---GVKI-SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
G+++ S + ++ L R G++ EA DL ++P T S A +G R
Sbjct: 180 VFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWT-AMIDGYVWAARFRE 238
Query: 472 AVTMGEEFFEMGLR--KPDGFVMLSNI--CAADGEWHEAENLRKIMKEKNVQ 519
A+ M F EM D F M+S I CA G E +R M + ++
Sbjct: 239 ALEM---FREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIK 287
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 161/516 (31%), Positives = 270/516 (52%), Gaps = 29/516 (5%)
Query: 47 FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLM 104
++ S L+ + A GD+ SAR VFD + V + W ++ S + +EA+ F
Sbjct: 188 IAVGSALIDMLARNGDLASARKVFDGLIEKTVVV--WTLLISRYVQGECAEEAVEIFLDF 245
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL- 163
E + +++T S ++ AC L ++ G Q+H++A +MGF +D V L+DMY+K +
Sbjct: 246 LEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIE 305
Query: 164 --LCSARRVFHGMFERDVVSWTSMISGYCNVS-KVDEAVVLFERMKLEGLEPNQFTYNAI 220
+ A +VF M + DV+SWT++ISGY + ++ +VLF M E ++PN TY++I
Sbjct: 306 QAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSI 365
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM----L 276
+ + A D ++ + + NA++S +A+S EA ++F + +
Sbjct: 366 LKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSM 425
Query: 277 VSGIKP-----------------NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
+S I ++ T ++ A G + G+++HA+ + G D
Sbjct: 426 ISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDR 485
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
F ++L+ MYS+CG L+DA F + +NV SW +MI KHG + ++ LF M+
Sbjct: 486 FVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILT 545
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G++ N+VT I+VLSACSH GLV +G E FRSM+ +G+ EHYAC+VD+L RSG + E
Sbjct: 546 GVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKE 605
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A + + ++P+ + C H ++ + E+ R P +V+LSN+ A
Sbjct: 606 ALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYAD 665
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
G W E +R M++ N+ K+ G S +E N E
Sbjct: 666 AGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHE 701
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 144/536 (26%), Positives = 245/536 (45%), Gaps = 65/536 (12%)
Query: 29 LRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
LR G+ +H L DL + + L+ +Y+ CG V SAR VFD + +++W M
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLR-DIVSWTAM 122
Query: 87 AS--AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL-LDIKKGKQVHAVATQMG 143
AS A G +E++ M E N +T V AC L G V + +MG
Sbjct: 123 ASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMG 182
Query: 144 -FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
+ D++VG+ALIDM ++ G L SAR+VF G+ E+ VV WT +IS Y +EAV +F
Sbjct: 183 LWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIF 242
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP--------------- 247
+G EP+++T +++I++ G S GF
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKS 302
Query: 248 -------------------DLVTWNAMISGFAQSK-RENEALKLFKGMLVSGIKPNNVTV 287
D+++W A+ISG+ QS +EN+ + LF ML IKPN++T
Sbjct: 303 NIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITY 362
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
+ +L+A GR++HA V + G+AL+ MY++ G +++AR +F
Sbjct: 363 SSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVF----- 417
Query: 348 KNVASWNAMIGCY--GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
N +MI C G+ +D I + M + T S++SA + G++ KG
Sbjct: 418 -NQLYERSMISCITEGRDAPLDHRIGRMD------MGISSSTFASLISAAASVGMLTKGQ 470
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNG 462
++ +M + G + +V M R G + +A ++ L+ + SM +G
Sbjct: 471 QL-HAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMI----SG 525
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENLRKIMKEKN 517
HG + A+++ + G++ D ++ + + C+ G E + + M+ +
Sbjct: 526 LAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDH 581
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 161/535 (30%), Positives = 257/535 (48%), Gaps = 72/535 (13%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
VF I PN + N M+ A + + A+ + +M N +TF +LK+C
Sbjct: 22 VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF----------------- 171
++G+Q+H ++G+E D+ V +LI MY++ G L A +VF
Sbjct: 82 FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141
Query: 172 ----------HGMFE----RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT- 216
MF+ +DVVSW +MISGY EA+ LF+ M + P++ T
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201
Query: 217 ----------------------------------YNAIIASYARRGDSNAAFAFFSRMTA 242
NA+I Y++ G A F ++
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSC 261
Query: 243 EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI 302
+ D+V+WN +I G+ EAL LF+ ML SG PN+VT+ +L A G+I I
Sbjct: 262 K----DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317
Query: 303 GREIHALVCRMGLHIDVFTG--SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY 360
GR IH + + + ++LIDMY+KCG ++ A +F K+++SWNAMI +
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGF 377
Query: 361 GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKIS 420
HG ++ +LF RM + G+ +++T + +LSACSH G ++ G IF+SM + Y +
Sbjct: 378 AMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPK 437
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF 480
EHY C++D+L SG EA ++++ +PM + + C HG +LA +
Sbjct: 438 LEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLM 497
Query: 481 EMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
++ P +V+LSNI A GEW E +R ++ K ++K PG S +E +E E
Sbjct: 498 KVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHE 552
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 203/430 (47%), Gaps = 76/430 (17%)
Query: 19 LLGKCMKSKALRQGKQVHA-----------LLCTNDLNIFSLKSKL-------------- 53
LL C KSKA +G+Q+H + T+ +++++ +L
Sbjct: 72 LLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD 131
Query: 54 -------VGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE 106
+ YA G++ SA+ +FD+IP +V N M+ A TG+++EA+ F M +
Sbjct: 132 VVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK 191
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
R ++ T VL AC ++ G+QVH+ GF +++ + NALID+YSKCG + +
Sbjct: 192 TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVET 251
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS--- 223
A +F G+ +DVVSW ++I GY +++ EA++LF+ M G PN T +I+ +
Sbjct: 252 ACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAH 311
Query: 224 ----------------------------------YARRGDSNAAFAFFSRMTAEGFVPDL 249
YA+ GD AA F+ M + L
Sbjct: 312 LGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKS----L 367
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI-HA 308
+WNAMI GFA R N LF M +GI+P+++T G+L A +G + +GR I +
Sbjct: 368 SSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKS 427
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVD 367
+ + + +ID+ G K+A+ + + ++ + W +++ +HG ++
Sbjct: 428 MTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLE 487
Query: 368 SSIELFERML 377
+ E F R L
Sbjct: 488 LA-ESFARNL 496
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 18/226 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALL---CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C A+ G+ +H + + N SL++ L+ +YA CGD+ +A VF+ + +
Sbjct: 305 ILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLH 364
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGK 133
++ N M+ A G FS MR+ + TF +L AC G LD+ G+
Sbjct: 365 KSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDL--GR 422
Query: 134 QVHAVATQMGFENDVSVG----NALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISG 188
+ TQ + D++ +ID+ GL A+ + M E D V W S++
Sbjct: 423 HIFKSMTQ---DYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKA 479
Query: 189 YCNVSKVDEAVVLFER--MKLEGLEPNQFTYNAIIASYARRGDSNA 232
C E F R MK+E P + + I + A D A
Sbjct: 480 -CRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVA 524
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 268/513 (52%), Gaps = 37/513 (7%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMR-EF 107
+ S L +Y N AR VFD +P+P+ + W + + +G+ EA+ F M
Sbjct: 160 VASALAKLYFTLSRGNDARKVFDAVPSPDTVL--WNTLLAGLSGS--EALEAFVRMAGAG 215
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
R + T + VL A + + G+ VHA + G V LI +Y+KCG + A
Sbjct: 216 SVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECA 275
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR 227
R +F M D+V++ ++ISGY V +V LF+ + GL P+ T A+I ++
Sbjct: 276 RHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPF 335
Query: 228 G-----------------DSNAA--------FAFFSRMT----AEGFVPD--LVTWNAMI 256
G D+NA + F+ M A +P+ + +WNAMI
Sbjct: 336 GHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMI 395
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH 316
SG+AQ+ A+ LF+ M ++PN +T++ L A G++ +G+ +H ++ L
Sbjct: 396 SGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLE 455
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
++V+ +ALIDMY KCGS+ +AR +F+ KNV SWN MI YG HG +++L++ M
Sbjct: 456 LNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDM 515
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
++ + T +SVL ACSHGGLV++G +FRSM YG+ EH C+VD+L R+G+
Sbjct: 516 MDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQ 575
Query: 437 MVEAYDLLRQVP-MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
+ EA++L+ + P V + GA C +H DLA ++ FE+ +V+LSN
Sbjct: 576 LKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSN 635
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ + ++ EA +R+ K + + K PG + +E
Sbjct: 636 LYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIE 668
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 161/344 (46%), Gaps = 45/344 (13%)
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+ +HA+A GF D V +AL +Y AR+VF + D V W ++++G
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSG- 201
Query: 193 SKVDEAVVLFERMKLEG-LEPNQFTYNAIIAS---------------------------- 223
EA+ F RM G + P+ T +++ +
Sbjct: 202 ---SEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258
Query: 224 -------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
YA+ GD A F RM EG PDLVT+NA+ISG++ + +++LFK ++
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRM--EG--PDLVTYNALISGYSINGMVGSSVELFKELV 314
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
G++P++ T+ ++ G + +HA V + GL + +AL +Y + +
Sbjct: 315 GMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMD 374
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
AR F+ K + SWNAMI Y ++G+ + ++ LF++M +R N +T+ S LSAC+
Sbjct: 375 SARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACA 434
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
G + G + + + ++++ ++DM + G + EA
Sbjct: 435 QLGALSLGKWVHKIIANE-KLELNVYVMTALIDMYVKCGSIAEA 477
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 118/264 (44%), Gaps = 11/264 (4%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
L C+ + ++ G +A + T L +Y D++SAR FD +P +
Sbjct: 340 LAGCLHAHVVKAGLDANAPVST----------ALTTLYCRFNDMDSARRAFDAMPEKTME 389
Query: 80 MLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
N M+ A G + A+ F M+ R N T S L AC L + GK VH +
Sbjct: 390 SWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKII 449
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
E +V V ALIDMY KCG + AR +F M ++VVSW MISGY + EA+
Sbjct: 450 ANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEAL 509
Query: 200 VLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISG 258
L++ M L P T+ +++ + + G F MT++ G P + M+
Sbjct: 510 KLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDL 569
Query: 259 FAQSKRENEALKLFKGMLVSGIKP 282
++ + EA +L S + P
Sbjct: 570 LGRAGQLKEAFELISEFPKSAVGP 593
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 154/330 (46%), Gaps = 46/330 (13%)
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
G + F +A+ Y N A F + + PD V WN +++G + S EA
Sbjct: 153 GFAADNFVASALAKLYFTLSRGNDARKVFDAVPS----PDTVLWNTLLAGLSGS----EA 204
Query: 269 LKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHAL--VCRMGLHIDVFTGSAL 325
L+ F M +G ++P++ T+ VL A + +GR +HA C + H V TG L
Sbjct: 205 LEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTG--L 262
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
I +Y+KCG ++ AR LF+ ++ ++NA+I Y +GMV SS+ELF+ ++ G+R +
Sbjct: 263 ISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSS 322
Query: 386 VTLISV-----------LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
TL+++ L+ C H +V+ GL+ + + + CR
Sbjct: 323 STLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVS------------TALTTLYCRF 370
Query: 435 GRM---VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
M A+D + + M N+M + +G ++AV + ++ + +R P+
Sbjct: 371 NDMDSARRAFDAMPEKTMESWNAMISGYAQ----NGLTEMAVALFQQMQALNVR-PNPLT 425
Query: 492 MLSNI--CAADGEWHEAENLRKIMKEKNVQ 519
+ S + CA G + + KI+ + ++
Sbjct: 426 ISSALSACAQLGALSLGKWVHKIIANEKLE 455
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 160/415 (38%), Positives = 229/415 (55%), Gaps = 17/415 (4%)
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+HAV T++GF NA I Y G + ARRVF GM RD VS+ SMI GY
Sbjct: 31 PSLHAVCTKLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVS 90
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
V A LFER+ L P T+ +++A + R GD +A F M DLV+W
Sbjct: 91 GDVGSAQRLFERV----LAPTPVTWTSMVAGFCRAGDVESARRVFEEMPER----DLVSW 142
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
NAMISG ++ EAL LF+ M+ G PN TV VL A G+++ G+ +H V +
Sbjct: 143 NAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEK 202
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
L D F G+AL+DMY+KCG+++ A +F R +N +WNAMI +G ++++
Sbjct: 203 KRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDM 262
Query: 373 FERMLEEGMRA-NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
F +M G A +EVT + VL ACSH G V+ G E F ++ ++YGV++ EHYAC+VD+L
Sbjct: 263 FRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLL 322
Query: 432 CRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF-EMGLRKPDGF 490
RSG + EA+ L+ ++PM + A GC +H V M E EM
Sbjct: 323 ARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKN----VKMAENVISEMEATCSGDH 378
Query: 491 VMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR---NEFVEKEVQNES 542
V+LSN+ AA G W+ E++R+ M+ K ++K PG S VE +EF+ + + S
Sbjct: 379 VLLSNLYAAVGRWNGVEDVRRTMRSKGIEKIPGCSSVEMDGSIHEFISGDKSHPS 433
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 9/260 (3%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFI 108
+ +V + GDV SAR VF+++P + +++W M S GN EA+ F M E
Sbjct: 112 TSMVAGFCRAGDVESARRVFEEMPERD--LVSWNAMISGCVGNRLPVEALCLFRWMMEEG 169
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ N+ T VL AC G ++ GK VH + D +G AL+DMY+KCG + A
Sbjct: 170 FVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELAL 229
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG-LEPNQFTYNAIIASYARR 227
VF G+ R+ +W +MI+G +A+ +F +M+L G + P++ T+ ++ + +
Sbjct: 230 EVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHA 289
Query: 228 GDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
G +A F + + G L + M+ A+S EA KL M +KP+ V
Sbjct: 290 GFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEM---PMKPDVVV 346
Query: 287 VTGVLQAGGLTGSIQIGREI 306
+L L ++++ +
Sbjct: 347 WRALLGGCRLHKNVKMAENV 366
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 7/181 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + AL GK VH + L L + LV +YA CG V A VF + N
Sbjct: 180 VLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARN 239
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMR-EFIYRCNKFTFSIVLKAC--VGLLDIKKGKQ 134
N M+ A G +A+ F M ++ TF VL AC G +D K +
Sbjct: 240 TCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGK-EH 298
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVS 193
+ + + G E + ++D+ ++ G L A ++ M + DVV W +++ G C +
Sbjct: 299 FYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGG-CRLH 357
Query: 194 K 194
K
Sbjct: 358 K 358
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 161/524 (30%), Positives = 267/524 (50%), Gaps = 46/524 (8%)
Query: 15 YLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKI 73
+L LL +C K L Q H + + L+ + L S+ + + G + + +F
Sbjct: 43 HLLSLLKQCSNLKHLHQ---THCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHK 99
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P++++ N ++ A + EAI ++ + R + ++ VLKA V LL I G+
Sbjct: 100 TRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGR 159
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H A G +D+ V ALI MYS CG + AR++F G+ RDV W
Sbjct: 160 QIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFW----------- 208
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
NA++A YA+ GD + A F RM ++++W
Sbjct: 209 ------------------------NAMVAGYAKVGDVDNARHLFERMPER----NVISWT 240
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
A+I+G+AQ R NEA+ +F+ M + ++P+ + + L A G++++G IH + +
Sbjct: 241 AVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKH 300
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
GL V +ALIDMY+KCG ++ A +F+ K+V +W +MI HG+ ++E+F
Sbjct: 301 GLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMF 360
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
M ++ NE+T +++LSAC H GLVE G F+ M +YG+K +HY C++D+L R
Sbjct: 361 SCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGR 420
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G + EA +L+R +P + G+ IHG +L + ++ + +L
Sbjct: 421 AGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPHNSGNYTLL 480
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFV 534
SNI A +W+EA +RK+M++ V+K PG S +E N EFV
Sbjct: 481 SNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRVHEFV 524
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 258/513 (50%), Gaps = 36/513 (7%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
L+ YA + A LVF+++P + N ++ + G EAI F M +
Sbjct: 458 LISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELD 517
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
T VL AC G+ VH + + G + S+ NAL+DMYS C S ++F
Sbjct: 518 SVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFR 577
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RR 227
M +++VVSWT+MI+ Y D+ L + M L+G+ P+ F + + ++A ++
Sbjct: 578 SMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQ 637
Query: 228 GDSNAAFAFFSRMTAEGFVP----------------------------DLVTWNAMISGF 259
G S + + M E +P D+++WN +I G+
Sbjct: 638 GKSVHGYTIRNGM--EKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGY 695
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
+++ NE+ LF ML+ +PN VT+T +L A S++ GREIHA R G D
Sbjct: 696 SRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDS 754
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+ +AL+DMY KCG+L AR LF+ KN+ SW MI YG HG +I LFE+M
Sbjct: 755 YASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGS 814
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G+ + + ++L AC H GL +G F++M++ Y ++ +HY C+VD+L R+G + E
Sbjct: 815 GIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKE 874
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A + + +P+ +S+ + +GC IH LA + ++ F++ +V+L+NI A
Sbjct: 875 ALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAE 934
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
W + L+ + + +++ G+S +E R++
Sbjct: 935 AERWEAVKKLKNKIGGRGLRENTGYSWIEVRSK 967
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 147/545 (26%), Positives = 249/545 (45%), Gaps = 53/545 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP-N 77
L+GK + +++ G + ++ +L SKLV +Y CGD+ SAR VFD + + N
Sbjct: 322 LIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGN 381
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V + N ++ A G F+E++ F M E ++ S +LK L + G H
Sbjct: 382 VHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHG 441
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
++GF +V NALI Y+K ++ A VF+ M +D +SW S+ISG + E
Sbjct: 442 YIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSE 501
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
A+ LF RM +G E + T NA++
Sbjct: 502 AIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLD 561
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y+ D + F M + ++V+W AMI+ + ++ ++ L + M++ GI+P
Sbjct: 562 MYSNCSDWQSTNQIFRSMGQK----NVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRP 617
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ VT L A S++ G+ +H R G+ + +AL++MY KC ++++AR +F
Sbjct: 618 DVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIF 677
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ K+V SWN +IG Y ++ + S LF ML + R N VT+ +L A + +E
Sbjct: 678 DRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLE 736
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
+G EI R ++ S A +VDM + G ++ A +D L + + M +
Sbjct: 737 RGREIHAYALRRGFLEDSYASNA-LVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGY 795
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNICAADGEWHEAENLRKIMKEKN 517
+HG A+ + E+ G+ +PD F + C G E K M +K
Sbjct: 796 ----GMHGFGKHAIALFEQMRGSGI-EPDAASFSAILYACCHSGLAAEGRRFFKAM-QKE 849
Query: 518 VQKQP 522
+ +P
Sbjct: 850 YKIEP 854
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 190/427 (44%), Gaps = 55/427 (12%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFS-----LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
C + ++L K+ HAL+ + L +LV Y CGD+ AR VFD +P
Sbjct: 107 CGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQA 166
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+ W + SA+ G+FQEA+ F M+ + S VLK L + +G+ +
Sbjct: 167 ADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVI 226
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + ++G +V NALI +YS+CG + A RVF M RD +SW SMI G +
Sbjct: 227 HGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWH 286
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIAS-------------------------------- 223
AV LF +M +G E + T +++ +
Sbjct: 287 GTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSG 346
Query: 224 -------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
Y + GD +A F M+++G ++ WN ++ G+A+ E+L
Sbjct: 347 IDDAALGSKLVFMYVKCGDMASARRVFDAMSSKG---NVHVWNLIMGGYAKVGEFEESLS 403
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
LF M GI P+ ++ +L+ + G H + ++G +ALI Y+
Sbjct: 404 LFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYA 463
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
K + DA +F ++ SWN++I +G+ +IELF RM +G + VTL+S
Sbjct: 464 KSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLS 523
Query: 391 VLSACSH 397
VL AC+
Sbjct: 524 VLPACAQ 530
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 148/282 (52%), Gaps = 6/282 (2%)
Query: 27 KALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
++L+QGK VH N + + + + L+ +Y C +V ARL+FD++ N +V N ++
Sbjct: 633 ESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLI 692
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
+ E+ FS M +R N T + +L A + +++G+++HA A + GF
Sbjct: 693 GGYSRNNFPNESFSLFSDML-LQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFL 751
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
D NAL+DMY KCG L AR +F + +++++SWT MI+GY A+ LFE+M
Sbjct: 752 EDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQM 811
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFAQSKR 264
+ G+EP+ +++AI+ + G + FF M E + P L + ++ +++
Sbjct: 812 RGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGD 871
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
EAL+ + M I+P++ +L + ++++ ++
Sbjct: 872 LKEALEFIESM---PIEPDSSIWVSLLHGCRIHKNVKLAEKV 910
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 169/380 (44%), Gaps = 44/380 (11%)
Query: 19 LLGKCMKSKALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C +S+ G+ VH + T + SL + L+ +Y+ C D S +F + N
Sbjct: 524 VLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKN 583
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V M+ + G F + G M R + F + L A G +K+GK VH
Sbjct: 584 VVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHG 643
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ G E + V NAL++MY KC + AR +F + +DV+SW ++I GY + +E
Sbjct: 644 YTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNE 703
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYA----------------RRG---DSNAAFA--- 235
+ LF M L+ PN T I+ + A RRG DS A+ A
Sbjct: 704 SFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVD 762
Query: 236 -------------FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
F R+T + +L++W MI+G+ A+ LF+ M SGI+P
Sbjct: 763 MYVKCGALLVARVLFDRLTKK----NLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEP 818
Query: 283 NNVTVTGVLQAGGLTGSIQIGRE-IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
+ + + +L A +G GR A+ + + + ++D+ S+ G LK+A
Sbjct: 819 DAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEF 878
Query: 342 FEITRIKNVAS-WNAMI-GC 359
E I+ +S W +++ GC
Sbjct: 879 IESMPIEPDSSIWVSLLHGC 898
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 105/197 (53%), Gaps = 13/197 (6%)
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ +Y + GD A F M + D+ W +++S +A++ EA+ LF+ M G
Sbjct: 142 LVLAYLKCGDLGEARTVFDGMPPQA--ADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCG 199
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ P+ V+ VL+ GS+ G IH L+ ++GL +ALI +YS+CG ++DA
Sbjct: 200 VSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAA 259
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS--- 396
+F+ ++ SWN+MIG +G ++++LF +M +G + VT++SVL AC+
Sbjct: 260 RVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLG 319
Query: 397 --------HGGLVEKGL 405
HG V+ GL
Sbjct: 320 YGLIGKAVHGYSVKSGL 336
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 9/213 (4%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK-LVGVYAGCGDVNSARLVFDKIP 74
+ C+L +L +G+++HA S S LV +Y CG + AR++FD++
Sbjct: 722 MTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLT 781
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N+ M+ G + AI F MR + +FS +L AC +G++
Sbjct: 782 KKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRR 841
Query: 135 -VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
A+ + E + ++D+ S+ G L A M E D W S++ G C +
Sbjct: 842 FFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHG-CRI 900
Query: 193 SKVDEAVVLFERM--KLEGLEPNQFTYNAIIAS 223
K V L E++ K+ LEP Y ++A+
Sbjct: 901 HK---NVKLAEKVADKVFKLEPENTGYYVLLAN 930
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 165/544 (30%), Positives = 270/544 (49%), Gaps = 35/544 (6%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C ALR G+QVH+L + + S L+ +Y+ CG + +A+ VFD++ +P+V
Sbjct: 121 LVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDV 180
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA- 137
++ A G F+ A M + + N+ T + +L AC +L G+Q+H
Sbjct: 181 VGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGY 236
Query: 138 VATQMGFEND-VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ ++G + V ALID YS+ G A+ VF + ++VVSW SM+ Y +++
Sbjct: 237 LIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLE 296
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRG----------------DSNAAFAFFSRM 240
EA+ +F M EG++PN+F + ++ + G D + A S
Sbjct: 297 EALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMY 356
Query: 241 TAEGFV------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
G V PDLV+W IS Q+ +A+ L M G PN +
Sbjct: 357 GRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFS 416
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
VL + S+ G + H L ++G ++ TG+ALI+MYSKCG + AR F++
Sbjct: 417 SVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTH 476
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+V SWN++I + +HG + ++E+F +M G++ ++ T + VL C+H G+VE+G F
Sbjct: 477 DVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFF 536
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
R M ++Y + HYAC++DML R+GR EA ++ +P + C +H
Sbjct: 537 RLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRN 596
Query: 469 RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
D+ + E+ R +V++SNI A GEW +A +R+ M E V+K G S +E
Sbjct: 597 LDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIE 656
Query: 529 KRNE 532
NE
Sbjct: 657 INNE 660
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 235/508 (46%), Gaps = 55/508 (10%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMRE 106
L+ K + G + A +FD++P NV + W + S +T G + A+ F+ M E
Sbjct: 50 LECKRLNRLVKSGRLADALDLFDRMPRKNV--VAWTSVMSGYTRNGRPEAALAMFADMVE 107
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
N F + L AC L ++ G+QVH++A + GF D +G+ LI+MYS+CG L +
Sbjct: 108 SGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPA 167
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS--- 223
A+ VF M DVV +TS+IS +C + + A +M +GL+PN+ T I+ +
Sbjct: 168 AKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPR 227
Query: 224 ------------------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
Y+R G+ A A F + + ++V+W
Sbjct: 228 VLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCK----NVVSWC 283
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
+M+ + + R EAL++F M+ G+ PN ++ VL G GSI +GR++H +
Sbjct: 284 SMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVL---GACGSIGLGRQLHCSAIKH 340
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
L D+ +AL+ MY + G +++ + ++ SW I ++G + +I L
Sbjct: 341 DLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALL 400
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
+M EG N SVLS+C+ +++G++ F + + G +++M +
Sbjct: 401 CQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ-FHCLALKLGCDSEICTGNALINMYSK 459
Query: 434 SGRMVE---AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGF 490
G+M A+D++ + NS+ +G HG + A+ + + G+ KPD
Sbjct: 460 CGQMGSARLAFDVMHTHDVTSWNSLI----HGHAQHGDANKALEVFSKMRSNGI-KPDDS 514
Query: 491 VMLSNI--CAADGEWHEAENLRKIMKEK 516
L + C G E E ++M ++
Sbjct: 515 TFLGVLMGCNHSGMVEEGELFFRLMIDQ 542
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 146/296 (49%), Gaps = 18/296 (6%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +LG C ++ G+Q+H +DL + + L+ +Y G V + +KI
Sbjct: 317 LSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIE 373
Query: 75 NPNVFMLNWMVMASAFTGNFQ-----EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
NP+ +++W +A + NFQ +AI M + N + FS VL +C + +
Sbjct: 374 NPD--LVSW---TTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASL 428
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
+G Q H +A ++G ++++ GNALI+MYSKCG + SAR F M DV SW S+I G+
Sbjct: 429 DQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGH 488
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPD 248
++A+ +F +M+ G++P+ T+ ++ G FF M + F P
Sbjct: 489 AQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPA 548
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
+ MI ++ R +EAL++ M +P+ + +L + L ++ IG+
Sbjct: 549 PSHYACMIDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLASCKLHRNLDIGK 601
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 114/223 (51%), Gaps = 20/223 (8%)
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
G C+ + D + LE N+ + +A A F RM +
Sbjct: 31 GLCSAAAADNGCAESPDVVLECKRLNRLVKSGRLAD---------ALDLFDRMPRK---- 77
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
++V W +++SG+ ++ R AL +F M+ SG+ PN+ L A G+++ G ++H
Sbjct: 78 NVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVH 137
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+L R G D + GS LI+MYS+CGSL A+ +F+ +V + ++I + ++G +
Sbjct: 138 SLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFE 197
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACS-------HGGLVEK 403
+ E +ML++G++ NE T+ ++L+AC HG L++K
Sbjct: 198 LAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKK 240
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
DV ++ K G L DA LF+ KNV +W +++ Y ++G ++++ +F M+
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
E G+ N+ + L AC+ G + G ++ S+ R G +C+++M R G +
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQV-HSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 438 V---EAYDLLRQVPMYVTNSMAGAF-RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
E +D + + S+ AF RN G +LA + + GL KP+ M
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRN-----GEFELAAEALIQMLKQGL-KPNEHTMT 219
Query: 494 SNICA 498
+ + A
Sbjct: 220 TILTA 224
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 174/533 (32%), Positives = 276/533 (51%), Gaps = 32/533 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYA--GCGDVNSARLVFDKIPN 75
LL K + ++++ +Q L+ + L N + SK++ + G + A+ +F+
Sbjct: 115 LLSKLQQLSSVKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDTAM 174
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL-----DIK 130
N F+ N M+ A A + +AI ++ M + + FT+ LKAC +L DIK
Sbjct: 175 DNPFVCNTMIRAYAKSVFPIKAIYLYNFMHRKDIKSDHFTYPFGLKACARVLWCNEGDIK 234
Query: 131 --------KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
KG ++H ++G + D + N+L+ +YS+CG L AR VF M E+ + SW
Sbjct: 235 CTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGFLDLARCVFDEMTEKTITSW 294
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA 242
MIS Y ++ D A L M + N ++N +IA Y R G A F M
Sbjct: 295 NVMISAYDQINDFDSADSLIGSMPGK----NVVSWNMLIARYIRLGKIEDAKVVFQEMPE 350
Query: 243 EGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI 302
D V+WN+MI+G+ Q K AL LF+ M ++ ++ ++T+ VL A TG+++I
Sbjct: 351 R----DAVSWNSMIAGYVQIKDYARALALFREMEIANVEATDITLISVLGACAETGALEI 406
Query: 303 GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGK 362
GR+IH + + I+ + +AL+DMY+KCG L A +F ++K+++ WNAMI
Sbjct: 407 GRKIHLSLKQREYKIEGYLSNALVDMYAKCGHLNLAWEVFSELKMKHISCWNAMIVSLAV 466
Query: 363 HGMVDSSIELFE--RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKIS 420
HG + ++ LF M +G R N VT I VL ACSH GLV++G F M Y +
Sbjct: 467 HGYCEEALRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLVDEGRTFFNRMVNEYKIMPD 526
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF 480
+HY C+VD+L R G + EA+ +++ +P + + C +H DLA E F
Sbjct: 527 IKHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLA---EESFQ 583
Query: 481 EMGLRKP--DG-FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
++G +P DG +V+LSNI A W++ E +R M V K+PG S + R
Sbjct: 584 QLGKMEPLRDGDYVLLSNIYAEAQRWNDVERVRSEMIGSGVPKKPGSSHIGIR 636
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 171/555 (30%), Positives = 281/555 (50%), Gaps = 52/555 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFD-KIPN 75
LL +C K L Q +HAL+ N D N+ ++ +K + AR +FD +
Sbjct: 8 LLQRCRTRKTLLQ---IHALILRNAIDANV-NILTKFITTCGQLSSTRHARHLFDNRSHR 63
Query: 76 PNVFMLNWMVMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ F+ N M+ + +A Y L RE + + FTF+++ K C + + +G +
Sbjct: 64 GDTFLCNSMIKSHVVMRQLADAFTLYKDLRRETCFVPDNFTFTVLAKCCALRMAVWEGLE 123
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H ++GF D+ V AL+DMY+K G L AR+VF+ M +R +VSWT++I GY
Sbjct: 124 THGHVVKIGFCFDMYVSTALVDMYAKFGNLGLARKVFNDMPDRSLVSWTALIGGYVRRGD 183
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP------- 247
+ A LF+ M + +N +I Y + GD +A + F M +
Sbjct: 184 MGNAWFLFKLMPGR----DSAAFNLLIDGYVKVGDMESARSLFDEMPERNVISWTSMIYG 239
Query: 248 --------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGI-KPNNVT 286
+LV+WNAMI G+ Q+K+ +EALKLF+ + S + +PN VT
Sbjct: 240 YCNNGDVLSARFLFDAMPEKNLVSWNAMIGGYCQNKQPHEALKLFRELQSSTVFEPNEVT 299
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
V +L A G++++G +H V R L V ++L+DMY KCG + AR +F
Sbjct: 300 VVSILPAIATLGALELGEWVHRFVQRKKLDAAVNVCTSLVDMYLKCGEISKARKVFSEIP 359
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
K A+WNA+I + +G+ ++E F M +EG++ N++T+ VLSACSHGGLVE+G
Sbjct: 360 KKETATWNALINGFAMNGLASEALEAFSEMQQEGIKPNDITMTGVLSACSHGGLVEEGKG 419
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
F++M E G+ EHY C+VD+L R+G + EA +L++ +P + +F C
Sbjct: 420 QFKAMIES-GLSPKIEHYGCLVDLLGRAGCLDEAENLIKSMPFEANGIILSSFSFACGFS 478
Query: 467 GRRDLAVTMGEEFFEMGLRKPDG----FVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
VT + + G +VM+ N+ A + W + + + +M+ + +K+
Sbjct: 479 ND----VTRAQRVLNQAVNMEPGNNGIYVMMRNLYAMEERWKDVKEINGLMRRRGAKKEV 534
Query: 523 GFSRVE---KRNEFV 534
G S +E + +EF+
Sbjct: 535 GSSAIEVDSRVSEFI 549
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 161/524 (30%), Positives = 267/524 (50%), Gaps = 46/524 (8%)
Query: 15 YLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKI 73
+L LL +C K L Q H + + L+ + L S+ + + G + + +F
Sbjct: 43 HLLSLLKQCSNLKHLHQ---THCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHK 99
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P++++ N ++ A + EAI ++ + R + ++ VLKA V LL I G+
Sbjct: 100 TRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGR 159
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H A G +D+ V ALI MYS CG + AR++F G+ RDV W
Sbjct: 160 QIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFW----------- 208
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
NA++A YA+ GD + A F RM ++++W
Sbjct: 209 ------------------------NAMVAGYAKVGDVDNARHLFERMPER----NVISWT 240
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
A+I+G+AQ R NEA+ +F+ M + ++P+ + + L A G++++G IH + +
Sbjct: 241 AVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKH 300
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
GL V +ALIDMY+KCG ++ A +F+ K+V +W +MI HG+ ++E+F
Sbjct: 301 GLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMF 360
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
M ++ NE+T +++LSAC H GLVE G F+ M +YG+K +HY C++D+L R
Sbjct: 361 SCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGR 420
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G + EA +L+R +P + G+ IHG +L + ++ + +L
Sbjct: 421 AGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPHNSGNYTLL 480
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFV 534
SNI A +W+EA +RK+M++ V+K PG S +E N EFV
Sbjct: 481 SNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRVHEFV 524
>gi|125589995|gb|EAZ30345.1| hypothetical protein OsJ_14392 [Oryza sativa Japonica Group]
Length = 704
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 167/576 (28%), Positives = 284/576 (49%), Gaps = 69/576 (11%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LG C + + LR G QVH + + + F + + L+ Y+ C D+++AR +FD + N
Sbjct: 74 LGACARGRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNE 133
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLM---REFI---------------YRC--------- 111
+ + MV+A +A+ M R+ Y C
Sbjct: 134 LLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQL 193
Query: 112 --------NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
N+FT+ VL+ACV + ++ G+ +H Q GFE++ + +AL+D+Y + G
Sbjct: 194 LAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGA 253
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
+ A V++G+ +++ ++I+G+ ++ + ++A ++F +M E + +YN +I +
Sbjct: 254 VDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMT----EHDSGSYNLMIKA 309
Query: 224 YARRGDSNAAFAFFSRMTAEGFVP----------------------------DLVTWNAM 255
YA G F M V + VTWN+M
Sbjct: 310 YADEGRLEDCRRMFEMMPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSM 369
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
ISG+ Q+ + +EALKLF M I+ + T +L A G+I+ G+ +HAL+C+
Sbjct: 370 ISGYVQNDQSSEALKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPF 429
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+ + G+AL+DMYSKCG + DAR F NVASW ++I ++G +I F R
Sbjct: 430 ESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFAR 489
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
ML+ ++ NE+T + +L A + GLV KG+ F SM E YGV + EHY C VD+L R+
Sbjct: 490 MLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSM-ESYGVVPTVEHYTCAVDLLGRAR 548
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
R+ EA + ++P+ + GA C ++ + E+ F MG + +V +SN
Sbjct: 549 RVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSN 608
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
I A G+W + +R ++ N +K+PG S +E ++
Sbjct: 609 IYAKLGKWEDVVKVRTRLRSINAKKEPGCSWIEVKD 644
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 156/369 (42%), Gaps = 78/369 (21%)
Query: 81 LNW--MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
L+W V A A G ++A+G + M ++ T++ L AC ++ G QVH
Sbjct: 33 LSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQ 92
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ G ++ VG +L+D YS C L +AR +F + + + W+ M+ + + +A
Sbjct: 93 VVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDA 152
Query: 199 VVLFERMKLEGLEPNQ--FTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
+ L +RM P++ F + AII+ YAR +
Sbjct: 153 LDLLQRMP-----PSRDLFAWTAIISGYARGANEYCC----------------------- 184
Query: 257 SGFAQSKRENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
++L+LF +L G+ PN T VL+A G+++ GR IH + + G
Sbjct: 185 ----------KSLELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGF 234
Query: 316 HIDVFTGSALIDMYSKCGSL-------------------------------KDARTLFEI 344
+ SAL+D+Y + G++ +DA+ +F
Sbjct: 235 ESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQ 294
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+ S+N MI Y G ++ +FE M R N VTL S++S G +E+G
Sbjct: 295 MTEHDSGSYNLMIKAYADEGRLEDCRRMFEMM----PRRNMVTLNSMMSVLLQNGKLEEG 350
Query: 405 LEIFRSMKE 413
++F +K+
Sbjct: 351 RKLFEQIKD 359
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 50/331 (15%)
Query: 17 DCLLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPN 75
D +L C+K AL G+ +H L + L S LV +Y G V+ A +V++ +
Sbjct: 207 DSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQM 266
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
P++ N ++ G ++A FS M E + ++++++KA D + +
Sbjct: 267 PSLITSNTLIAGFISMGRTEDAKLVFSQMTEH----DSGSYNLMIKA---YADEGRLEDC 319
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF-ERDVVSWTSMISGYCNVSK 194
+ M N V++ N+++ + + G L R++F + ER+ V+W SMISGY +
Sbjct: 320 RRMFEMMPRRNMVTL-NSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQ 378
Query: 195 VDEAVVLFE---RMKLE--------------------------------GLEPNQFTYNA 219
EA+ LF R+ +E E N + A
Sbjct: 379 SSEALKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTA 438
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ Y++ G + A A FS + + P++ +W ++I+G AQ+ EA+ F ML +
Sbjct: 439 LVDMYSKCGCVSDARAAFSCIMS----PNVASWTSLINGLAQNGHWMEAIVQFARMLKNN 494
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIG-REIHAL 309
+KPN +T G+L A G + G R H++
Sbjct: 495 VKPNEITFLGILMASARAGLVNKGMRFFHSM 525
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 39/248 (15%)
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
++WNA ++ A+ R +AL M S + T L A +++G ++H
Sbjct: 33 LSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQ 92
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
V + G G++L+D YS C L ARTLF+ N W+ M+ + ++ +
Sbjct: 93 VVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDA 152
Query: 370 IELFERM-----------------------------------LEEGMRANEVTLISVLSA 394
++L +RM E+G+ NE T SVL A
Sbjct: 153 LDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRA 212
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYV 451
C G +E G I + + G + + + +VD+ CRSG + +A Y+ L+ +
Sbjct: 213 CVKMGALEFGRSIHGCLIQS-GFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLIT 271
Query: 452 TNSMAGAF 459
+N++ F
Sbjct: 272 SNTLIAGF 279
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 2/179 (1%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVF 70
S + LL C + QGK VHALLC + + LV +Y+ CG V+ AR F
Sbjct: 397 SASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAF 456
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
I +PNV ++ A G++ EAI F+ M + + N+ TF +L A +
Sbjct: 457 SCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVN 516
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISG 188
KG + G V +D+ + + A + M D V W ++++
Sbjct: 517 KGMRFFHSMESYGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTA 575
>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 1463
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 250/463 (53%), Gaps = 11/463 (2%)
Query: 76 PNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P+V+ W M S F+ +A+ +F M N T + AC L ++ G
Sbjct: 314 PDVY--TWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGL 371
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
++H A +MG + VGN+LIDMYSKCG L +AR VF + E+DV +W SMI GYC
Sbjct: 372 EIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAG 431
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP-DLVTW 252
+A LF R++ + PN T+NA+I+ + GD + A F M +G V + +W
Sbjct: 432 YGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASW 491
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N++I+G+ Q +N+AL +F+ M PN+VT+ +L A + + +EIH V R
Sbjct: 492 NSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLR 551
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
L ++ ++L+D Y+K G++K +RT+F K++ +WN++I Y HG DS+ +L
Sbjct: 552 RNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQL 611
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F++M G+R N TL S++ A G+V+KG +F S+ E + + + +HY +VD+
Sbjct: 612 FDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYG 671
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV- 491
RSGR+ +A + + +P+ S+ + C HG +LAV + E+ +PD V
Sbjct: 672 RSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHEL---EPDNHVI 728
Query: 492 --MLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+L A G++ + +RK+ KE ++K VE RN+
Sbjct: 729 YRLLVQAYALYGKFEQTLKVRKLGKESAMKKCTAQCWVEVRNK 771
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/440 (33%), Positives = 246/440 (55%), Gaps = 2/440 (0%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALL-CTNDLNIFSLKSKLVGVYAGCGDVNSAR 67
+ LS N LL C+ ++ G+++H + + +N F +++KLV +YA CG + AR
Sbjct: 76 SKLSTNTYINLLQTCIDVGSIELGRELHVRMGLVHRVNPF-VETKLVSMYAKCGCLKDAR 134
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
VFD + N++ + M+ A + ++E + F LM + F F +L+AC
Sbjct: 135 KVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCE 194
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D++ K +H++ + G + + N+++ + KCG L AR+ F M ERD VSW MI+
Sbjct: 195 DLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIA 254
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
GYC DEA L + M +G +P TYN +IASY++ GD + +M + G P
Sbjct: 255 GYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAP 314
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
D+ TW +MISGF+QS R ++AL FK M+++G++PN +T+ A S+Q G EIH
Sbjct: 315 DVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIH 374
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+MG+ + G++LIDMYSKCG L+ AR +F+ K+V +WN+MIG Y + G
Sbjct: 375 CFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGG 434
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+ ELF R+ E + N VT +++S C G ++ +++F+ M++ GVK + + +
Sbjct: 435 KAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSL 494
Query: 428 VDMLCRSGRMVEAYDLLRQV 447
+ + G +A + RQ+
Sbjct: 495 IAGYHQLGEKNKALAIFRQM 514
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 5/131 (3%)
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL--HIDVFTGSA 324
EA+ + G K + T +LQ GSI++GRE+H RMGL ++ F +
Sbjct: 63 EAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHV---RMGLVHRVNPFVETK 119
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+ MY+KCG LKDAR +F+ + +N+ +W+AMIG Y + +ELF M+ +G+ +
Sbjct: 120 LVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPD 179
Query: 385 EVTLISVLSAC 395
+L AC
Sbjct: 180 AFLFPKILQAC 190
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 13/234 (5%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAG 59
M L F N++++ +L C A ++ K++H + +L + ++ + LV YA
Sbjct: 514 MQSLNFSPNSVTIL---SILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAK 570
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
G++ +R VF+ + + ++ N ++ G A F MR R N+ T + +
Sbjct: 571 SGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASI 630
Query: 120 LKA--CVGLLDIKKGKQV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-F 175
+ A G++D KG+ V ++ + + A++D+Y + G L A M
Sbjct: 631 IHAYGIAGMVD--KGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPI 688
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEP-NQFTYNAIIASYARRG 228
E DV WTS+++ ++ AV+ +R L LEP N Y ++ +YA G
Sbjct: 689 EPDVSIWTSLLTACRFHGNLNLAVLAAKR--LHELEPDNHVIYRLLVQAYALYG 740
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 156/528 (29%), Positives = 263/528 (49%), Gaps = 68/528 (12%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
VF+ IP PN + N M A + + A+ + +M N FTF +LK+C
Sbjct: 31 VFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKT 90
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF----------------- 171
K+G+Q+H ++GF+ D+ V +LI MY++ G L A++VF
Sbjct: 91 FKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITG 150
Query: 172 ----------HGMFE----RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
MF+ +DVVSW +MISGY +A+ LF+ M ++P++ T
Sbjct: 151 YASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTM 210
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGF-------------------------------V 246
++++ A+ G S + GF
Sbjct: 211 ATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSN 270
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
D+++WN +I G+ EAL LF+ ML SG PN+VT+ +L A G+I IGR I
Sbjct: 271 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 330
Query: 307 HALVCRMGLHIDVFTGSAL----IDMYSKCGSLKDARTLFEITRI-KNVASWNAMIGCYG 361
H + + + V S+L IDMY+KCG + A + + + +++++WNAMI +
Sbjct: 331 HVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFA 390
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
HG +++ ++F RM + G+ +++T + +LSACSH G+++ G IFRSM++ Y +
Sbjct: 391 MHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKL 450
Query: 422 EHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFE 481
EHY C++D+L SG EA +++ +PM + + C IHG +L + ++ +
Sbjct: 451 EHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIK 510
Query: 482 MGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ-PGFSRVE 528
+ P +V+LSNI A G+W+E +R ++ +K ++K+ PG S +E
Sbjct: 511 IEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIE 558
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 211/495 (42%), Gaps = 115/495 (23%)
Query: 19 LLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKS------------------------- 51
LL C KSK ++G+Q+H L DL+++ S
Sbjct: 81 LLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRD 140
Query: 52 -----KLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE 106
L+ YA G + SA+ +FD+IP +V N M+ A TGN+++A+ F M +
Sbjct: 141 VVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMK 200
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
+ ++ T + V+ AC I+ G+QVH+ GF +++ + NALID+YSKCG + +
Sbjct: 201 TNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVET 260
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS--- 223
A + G+ +DV+SW ++I GY +++ EA++LF+ M G PN T +I+ +
Sbjct: 261 ACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 320
Query: 224 ------------------------------------YARRGDSNAAFAFFSRMTAEGFVP 247
YA+ GD +AA + F
Sbjct: 321 LGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQV---SDSSAFNR 377
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
L TWNAMI GFA R N A +F M +GI+P+++T G+L A +G + +GR I
Sbjct: 378 SLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNI- 436
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+ R + IT + + MI G G+
Sbjct: 437 ---------------------------FRSMRQDYNIT--PKLEHYGCMIDLLGHSGLFK 467
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH---Y 424
+ E+ M M + V S+L AC G +E G + + +KI E+ Y
Sbjct: 468 EAEEMINTM---PMEPDGVIWCSLLKACKIHGNLELGESFAKKL-----IKIEPENPGSY 519
Query: 425 ACVVDMLCRSGRMVE 439
+ ++ +G+ E
Sbjct: 520 VLLSNIYATAGKWNE 534
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 162/515 (31%), Positives = 263/515 (51%), Gaps = 44/515 (8%)
Query: 25 KSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+ K+ + K+++A + + L+ S + +K+V D++ A +F+++ NPNVF+ N
Sbjct: 19 RVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNS 78
Query: 84 MVMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
++ A + + I Y L+R+ ++FTF + K+C L GKQVH +
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKF 138
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G V NALIDMY K L A +VF M+ERDV+SW S++SG
Sbjct: 139 GPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSG-------------- 184
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
YAR G A F M + +V+W AMISG+
Sbjct: 185 ---------------------YARLGQMKKAKGLFHLMLDK----TIVSWTAMISGYTGI 219
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
EA+ F+ M ++GI+P+ +++ VL + GS+++G+ IH R G
Sbjct: 220 GCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVC 279
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+ALI+MYSKCG + A LF K+V SW+ MI Y HG +IE F M ++
Sbjct: 280 NALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVK 339
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
N +T + +LSACSH G+ ++GL F M++ Y ++ EHY C++D+L R+G++ A +
Sbjct: 340 PNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVE 399
Query: 443 LLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGE 502
+ + +PM + + G+ + C G D+A+ + E+ +V+L+NI A G+
Sbjct: 400 ITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGK 459
Query: 503 WHEAENLRKIMKEKNVQKQPGFSRVEKRN---EFV 534
W + LRK+++ +N++K PG S +E N EFV
Sbjct: 460 WEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFV 494
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 168/540 (31%), Positives = 286/540 (52%), Gaps = 50/540 (9%)
Query: 24 MKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
++++ L + +++ ++ D + S + L G YA G V+ AR VFD++P N ++W
Sbjct: 137 VRNRNLGKARELFEIMPERD--VCSWNTMLSG-YAQNGCVDDARSVFDRMPEKND--VSW 191
Query: 84 MVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACV--GLLDIKKGKQVHAVA 139
+ SA+ N +EA F ++ +++V C+ G + KK +
Sbjct: 192 NALLSAYVQNSKMEEACMLFK---------SRENWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
M DV N +I Y++ G + AR++F +DV +WT+M+SGY V+EA
Sbjct: 243 DSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAR 301
Query: 200 VLFERM-------------------------KLEGLEP--NQFTYNAIIASYARRGDSNA 232
LF++M +L + P N T+N +I YA+ G +
Sbjct: 302 ELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISE 361
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
A F +M D V+W AMI+G++QS EAL+LF M G + N + + L
Sbjct: 362 AKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALS 417
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
++++G+++H + + G F G+AL+ MY KCGS+++A LF+ K++ S
Sbjct: 418 TCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS 477
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
WN MI Y +HG + ++ FE M EG++ ++ T+++VLSACSH GLV+KG + F +M
Sbjct: 478 WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMT 537
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLA 472
+ YGV + +HYAC+VD+L R+G + +A++L++ +P ++ G +HG +LA
Sbjct: 538 QDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
Query: 473 VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
T ++ F M +V+LSN+ A+ G W + LR M++K V+K PG+S +E +N+
Sbjct: 598 ETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNK 657
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 185/423 (43%), Gaps = 95/423 (22%)
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
E D+ N +I Y + L AR +F M ERDV SW +M+SGY VD+A +F+R
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 205 MKLEGLEPNQFTYNAIIASYARRGD-SNAAFAFFSR---------------------MTA 242
M E N ++NA++++Y + A F SR + A
Sbjct: 183 MP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEA 238
Query: 243 EGF-----VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ----- 292
F V D+V+WN +I+G+AQS + +EA +LF V + V+G +Q
Sbjct: 239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVE 298
Query: 293 ---------------------AGGLTGS-IQIGREI-HALVCRMGLHIDVFTGSALIDMY 329
AG + G +++ +E+ + CR +V T + +I Y
Sbjct: 299 EARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGY 353
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
++CG + +A+ LF+ ++ SW AMI Y + G ++ LF +M EG R N +
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 390 SVLSACS-----------HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
S LS C+ HG LV+ G E G + ++ M C+ G +
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYET--------GCFVGN----ALLLMYCKCGSIE 461
Query: 439 EAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
EA DL +++ + N+M + HG ++A+ E GL KPD M++
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSR----HGFGEVALRFFESMKREGL-KPDDATMVAV 516
Query: 496 ICA 498
+ A
Sbjct: 517 LSA 519
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 150/297 (50%), Gaps = 25/297 (8%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N +I Y + G AR++F M ERD+VSW MI GY + +A LFE M E
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMP----E 154
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
+ ++N +++ YA+ G + A + F RM + + V+WNA++S + Q+ + EA L
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACML 210
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
FK + N V+ GG +I E M + DV + + +I Y++
Sbjct: 211 FKS------RENWALVSWNCLLGGFVKKKKI-VEARQFFDSMNVR-DVVSWNTIITGYAQ 262
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
G + +AR LF+ + +++V +W AM+ Y ++ MV+ + ELF++M E NEV+ ++
Sbjct: 263 SGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAM 318
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
L+ G +E E+F M R + + ++ + G++ EA +L ++P
Sbjct: 319 LAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMP 370
>gi|297734691|emb|CBI16742.3| unnamed protein product [Vitis vinifera]
Length = 674
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 288/535 (53%), Gaps = 50/535 (9%)
Query: 24 MKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+K+ LR+ +++ + D I + +S ++ YA G ++SA+ VFD + + NVF +W
Sbjct: 111 LKNNELRKAEKLFQTM--PDRTIVA-ESAMIDGYAKAGLMDSAQKVFDAMIDTNVF--SW 165
Query: 84 MVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
+ S + G +A F M +T ++ A GL+D Q +V Q
Sbjct: 166 TSLISGYFRDGQVAKACQLFDQMPA--KNVVSWTTMVLGYARNGLID-----QARSVFNQ 218
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
M +N +S A++ Y G A ++FH M +R++ SW +MISG + +V+EA L
Sbjct: 219 MPEKNTIS-WTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKL 277
Query: 202 FERMKLE----------GLEPNQFT-----------------YNAIIASYARRGDSNAAF 234
F M L GL N FT +NA+I +Y A
Sbjct: 278 FHLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEAS 337
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F+ MT ++VTWNAMI G+A+ + + EA+K ML S I+PN T+T +L +
Sbjct: 338 ELFNLMTER----NIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTS- 392
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
G +++ + HAL +G + +ALI MYS+ G + +R FE + K+V SW
Sbjct: 393 -CWGMLEL-MQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWT 450
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
AM+ + HG D ++ +F ML+ G + +E+T + VLSACSH GLV+KG ++F SM
Sbjct: 451 AMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRA 510
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN-SMAGAFRNGCNIHGRRDLAV 473
YG++ EHY+C+VD+L R+G++ EA D++ ++P + ++ GA C +HG ++A
Sbjct: 511 YGLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMPECERDGAVLGALLGACRLHGNVEMAD 570
Query: 474 TMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+G++ E+ G+V+L+N+ AA G W E +RK MK++NV+K PGFS++E
Sbjct: 571 YIGQKLIELQPNSSGGYVLLANVFAARGNWDEFAEVRKKMKDRNVRKVPGFSQIE 625
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 196/447 (43%), Gaps = 38/447 (8%)
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
CG+V AR +FD++P+ + M+ A ++A F M +
Sbjct: 82 CGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQTMPDRTIVAESAMIDGY 141
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
KA GL+D V M + +V +LI Y + G + A ++F M ++V
Sbjct: 142 AKA--GLMD-----SAQKVFDAM-IDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNV 193
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
VSWT+M+ GY +D+A +F +M E N ++ A++ SY G ++ A F
Sbjct: 194 VSWTTMVLGYARNGLIDQARSVFNQMP----EKNTISWTAMMKSYVDNGRTDEALKLFHE 249
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
M +L +WN MISG KR NEA KLF M + + V+G+ + G
Sbjct: 250 MPQR----NLYSWNTMISGCLDGKRVNEAFKLFHLMPLRNAVSWTIMVSGLAR----NGF 301
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
++ RE + D+ +A+I Y + +A LF + +N+ +WNAMI
Sbjct: 302 TKLAREYFDQMPNK----DIAAWNAMITAYVDECLIVEASELFNLMTERNIVTWNAMIDG 357
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
Y +H +++ ML +R NE T+ +L++C G++E L ++ G +
Sbjct: 358 YARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSC--WGMLE--LMQAHALAIVVGCEC 413
Query: 420 SKEHYACVVDMLCRSGRMVE---AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
++ M R G + A++ L+ + +M AF HG D A+ +
Sbjct: 414 ETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAF----TYHGHGDHALHVF 469
Query: 477 EEFFEMGLRKPD--GFVMLSNICAADG 501
+ G KPD FV + + C+ G
Sbjct: 470 GHMLKSG-TKPDEITFVGVLSACSHAG 495
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 21/234 (8%)
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
N+ ++ + + G + G+ ++ E+ H D + +A+I Y K L+ A LF+
Sbjct: 73 NIKISQLGRCGNVRGARKLFDEMP--------HHDNVSYTAMITAYLKNNELRKAEKLFQ 124
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ + + +AMI Y K G++DS+ ++F+ M++ N + S++S G V K
Sbjct: 125 TMPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMID----TNVFSWTSLISGYFRDGQVAK 180
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
++F M + V + +V R+G + +A + Q+P T S ++
Sbjct: 181 ACQLFDQMPAKNVVS-----WTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYV 235
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
+ +GR D A+ + F EM R + + + C +EA L +M +N
Sbjct: 236 D-NGRTDEALKL---FHEMPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMPLRN 285
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+D++ + I +CG+++ AR LF+ + S+ AMI Y K+ + + +LF+ M
Sbjct: 67 LDIYNCNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQTM 126
Query: 377 LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGR 436
+ + A +++ + GL++ ++F +M + + + ++ R G+
Sbjct: 127 PDRTIVAES----AMIDGYAKAGLMDSAQKVFDAM-----IDTNVFSWTSLISGYFRDGQ 177
Query: 437 MVEAYDLLRQVP----MYVTNSMAGAFRNG 462
+ +A L Q+P + T + G RNG
Sbjct: 178 VAKACQLFDQMPAKNVVSWTTMVLGYARNG 207
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 268/545 (49%), Gaps = 49/545 (8%)
Query: 30 RQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
R+G +VHA L + L ++ + L+ +YA CG +N A +VF + N + N M+
Sbjct: 405 RKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITG 464
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
F EA+ F MR + FT L +C L I G+Q+H ++G + D
Sbjct: 465 LDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLD 524
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV-SKVDEAVVLFERMK 206
VSV NAL+ +Y +CG + ++ F M + D VSW S+I + + EAV F M
Sbjct: 525 VSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMM 584
Query: 207 LEGLEPNQFTY-----------------------------------NAIIASYARRGDSN 231
G +PN+ T+ NA++A Y + GD
Sbjct: 585 RAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMG 644
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
FSRM+ D V+WN+MISG+ ++ +A+ + M+ G + + T VL
Sbjct: 645 YCENIFSRMSDR---QDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVL 701
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A +++ G E+H R L D+ GSAL+DMY+KCG + A FE+ +N+
Sbjct: 702 SACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLY 761
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SWN+MI Y +HG S++LF +M +G + VT + VLSACSH GLV +G F SM
Sbjct: 762 SWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSM 821
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP----MYVTNSMAGAFRNGCNIHG 467
E YG+ EH++C+VD+L R G + + D L Q+P + + ++ GA C +G
Sbjct: 822 SEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGA---CCRANG 878
Query: 468 RRD-LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSR 526
R L E EM +++LSN+ A+ G+W + R M++ V+K+ G S
Sbjct: 879 RNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSW 938
Query: 527 VEKRN 531
V ++
Sbjct: 939 VTMKD 943
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 211/425 (49%), Gaps = 49/425 (11%)
Query: 30 RQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
+ +++H L N +N L + L+ +YA GD+ S R VFD++P N +++W + S
Sbjct: 90 KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRN--LVSWSCLIS 147
Query: 89 AFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHAVATQMGF 144
+T N EA F M + N + F V++AC G +K G Q+H + ++ +
Sbjct: 148 GYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQY 207
Query: 145 ENDVSVGNALIDMYSKC-GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
NDV+ N LI MY G++ ARR F ++ R++VS SMIS YC A +F
Sbjct: 208 VNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFS 267
Query: 204 RMKLE----GLEPNQFTYNAIIASYARRGDSNAAF--AFFSRMTAEGFVPDLVTWNAMIS 257
M+ E GL+PN++T+ ++I++ +S +R+ GF+ DL +A++S
Sbjct: 268 TMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVS 327
Query: 258 GFAQS-------------------------------KRENEALKLFKGMLVS-GIKPNN- 284
GFA++ KR EA++LF M S + PN+
Sbjct: 328 GFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSY 387
Query: 285 -VTVTGVLQAGGLTGSIQIGREIHALVCRMG-LHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ +T + L + G E+HA + R G L+ + G+ LI+MY+KCG++ DA +F
Sbjct: 388 MIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVF 447
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ K+ +WN+MI ++ +++ F+ M + + T+IS LS+C+ G +
Sbjct: 448 RLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWIS 507
Query: 403 KGLEI 407
G ++
Sbjct: 508 VGEQL 512
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 165/503 (32%), Positives = 273/503 (54%), Gaps = 40/503 (7%)
Query: 29 LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGC--GDVNSARLVFDKIPNPNVFMLNWMV 85
++Q KQ+HA TN+L FS + S+++ +A GD A +F IPNPN+F N ++
Sbjct: 1 MKQTKQIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSII 60
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
+ F + F+ M R N TF+ ++KACV L ++ QV ++ ++G
Sbjct: 61 TSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLE---QVFTLSMKLGNS 117
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+DV +++I+ +SK + AR+VF R+VV WTS++SGYC+ V+EA +F++M
Sbjct: 118 SDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKM 177
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
L N+ +Y+A+++ Y R G FFS EG + F + K++
Sbjct: 178 PLR----NEASYSAMVSGYVRNG-------FFS----EG-----------VQLFRELKKK 211
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
++ + +K N + VL A + G+ + G+ IH+ V GL D+ G+AL
Sbjct: 212 DKG--------CACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEENGLEYDLELGTAL 263
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
ID Y KCG +K A +F +K+VA+W+AMI +G ++ELFE+M + G + NE
Sbjct: 264 IDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNE 323
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
VT + VL+AC+H L + +F M E+Y + S EHY CVVD+L RSG++ +A +
Sbjct: 324 VTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIEHYGCVVDVLARSGQVKKALTFIN 383
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
+ + ++ G+ NGC +HG +L +G+ E + +V+L+N+ A G+W
Sbjct: 384 SMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFEPKHSGRYVLLANMYANMGKWEG 443
Query: 506 AENLRKIMKEKNVQKQPGFSRVE 528
+RK+MK++ V G+S +E
Sbjct: 444 VSEVRKLMKDRGVMIVSGWSFIE 466
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 16/306 (5%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARL 68
N+ V ++ ++ K A+ +QV C+N N+ S LV Y CG VN AR
Sbjct: 116 NSSDVYFVSSVINAFSKHSAIHLARQVFDE-CSNR-NVVCWTS-LVSGYCSCGLVNEARD 172
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFS-----IVLKAC 123
VFDK+P N + MV G F E + F +++ C F+ VL AC
Sbjct: 173 VFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNAC 232
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+ ++GK +H+ + G E D+ +G ALID Y KCG + A +VF+ M +DV +W+
Sbjct: 233 TMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWS 292
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR---GDSNAAFAFFSRM 240
+MI G A+ LFE+M+ G +PN+ T+ ++ + + G+S F S
Sbjct: 293 AMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSE- 351
Query: 241 TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI 300
P + + ++ A+S + +AL M I+P+ +L + G
Sbjct: 352 -KYNITPSIEHYGCVVDVLARSGQVKKALTFINSM---HIEPDGAIWGSLLNGCLMHGHY 407
Query: 301 QIGREI 306
++G+++
Sbjct: 408 ELGQKV 413
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 255/487 (52%), Gaps = 47/487 (9%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ ++ Y D+ +AR + + + + N M+ G ++EA M +
Sbjct: 212 TTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQ 271
Query: 111 CNKFTFSIVLKAC--VGLLDIKKGKQVHAVATQMGFEND----VSVGNALIDMYSKCGLL 164
+++T++ V+ A GL +I G+QVHA + + +SV NALI +Y++CG L
Sbjct: 272 LDEYTYTSVISAASNAGLFNI--GRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKL 329
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
ARRVF M +D+VSW +++SG N +++EA +F M
Sbjct: 330 VEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMP------------------ 371
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNN 284
V L+TW MISG AQ+ E LKLF M + G++P +
Sbjct: 372 ---------------------VRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCD 410
Query: 285 VTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
G + + + GS+ G+++H+ + ++G + G+ALI MYS+CG ++ A T+F
Sbjct: 411 YAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLT 470
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+ SWNAMI +HG +I+L+E+ML+E + + +T +++LSACSH GLV++G
Sbjct: 471 MPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEG 530
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN 464
F +M+ YG+ ++HY+ ++D+LCR+G EA ++ +P + A GC
Sbjct: 531 RHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCW 590
Query: 465 IHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
IHG +L + + E+ ++ ++ LSN+ AA G+W E +RK+M+E+ V+K+PG
Sbjct: 591 IHGNMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGC 650
Query: 525 SRVEKRN 531
S +E N
Sbjct: 651 SWIEVEN 657
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 163/357 (45%), Gaps = 43/357 (12%)
Query: 32 GKQVHALLCTNDLN-----IFSLKSKLVGVYAGCGDVNSARLVFDKIP------------ 74
G+QVHA + + + S+ + L+ +Y CG + AR VFDK+P
Sbjct: 293 GRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILS 352
Query: 75 -----------------NPNVFMLNWMVMASAFTGNF--QEAIGYFSLMR-EFIYRCNKF 114
P +L W VM S N +E + F+ M+ E + C+ +
Sbjct: 353 GCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCD-Y 411
Query: 115 TFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
++ + +C L + G+Q+H+ Q+G ++ +SVGNALI MYS+CGL+ +A VF M
Sbjct: 412 AYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTM 471
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
D VSW +MI+ +A+ L+E+M E + P++ T+ I+++ + G
Sbjct: 472 PYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGR 531
Query: 235 AFFSRM-TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
+F M G P+ ++ +I ++ +EA + + M +P +L
Sbjct: 532 HYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESM---PFEPGAPIWEALLAG 588
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
+ G++++G + + + D T +L +MY+ G + + ++ R + V
Sbjct: 589 CWIHGNMELGIQAADRLLELMPQQD-GTYISLSNMYAALGQWDEVARVRKLMRERGV 644
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 154/350 (44%), Gaps = 17/350 (4%)
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
+ VHA GF+ + N LID Y K + AR +F + + D+V+ T+M+S Y
Sbjct: 15 ARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSA 74
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
+ A LF + + +YNA+I +++ D +AA F +M GFVPD T
Sbjct: 75 AGNIKLAHQLFNATPMSIRD--TVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFT 132
Query: 252 WNAMISGFAQ-SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
+++++ + + E +L + G + ++ S + +
Sbjct: 133 FSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMA 192
Query: 311 CRMGLHIDVFTG-------SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
L + G + +I Y + L AR L E +WNAMI Y
Sbjct: 193 AARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHR 252
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE----IFRSMKERYGVKI 419
G + + +L RM G++ +E T SV+SA S+ GL G + + R++ + G +
Sbjct: 253 GFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFV 312
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
+ A ++ + R G++VEA + ++P+ S A +GC ++ RR
Sbjct: 313 LSVNNA-LITLYTRCGKLVEARRVFDKMPVKDLVSW-NAILSGC-VNARR 359
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 277/560 (49%), Gaps = 82/560 (14%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYR 110
L+ +YA ++ A +F++IP +VF +W V+ S F G + +G F+ M++
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQTDVF--SWTVLISGFARIGLSADVLGLFTKMQDQGVC 384
Query: 111 CNKFTFSIVLKACVGLL-DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
N+FT SIVLK+C + D + GK +H + G + D + N+++D Y KC A +
Sbjct: 385 PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444
Query: 170 VFHGMFERDVVS-------------------------------WTSMISGYCNVSKVDEA 198
+F M E+D VS W +MI G A
Sbjct: 445 LFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVA 504
Query: 199 VVLFERMKLEGLEPNQFTY-----------------------------------NAIIAS 223
+ L +M G N+ T+ N++I
Sbjct: 505 LELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDM 564
Query: 224 YARRGDSNAAFAFFSRMTAEG-----------FVPDLVTWNAMISGFAQSKRENEALKLF 272
Y + G+ A F + E V + V+W++M+SG+ Q+ R +ALK F
Sbjct: 565 YCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTF 624
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
M+ S ++ + T+T V+ A G +++GR++H + ++G +DVF GS++IDMY KC
Sbjct: 625 SFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKC 684
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
GSL DA +F + +NV W +MI HG ++ LFE M+ EG+ NEV+ + VL
Sbjct: 685 GSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVL 744
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
+ACSH GL+E+G + FR M+E YG++ EH+ C+VD+ R+GR+ E + + +
Sbjct: 745 TACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKL 804
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
+S+ +F + C +H ++ + + ++ E+ +++ S+ICA + W EA +R +
Sbjct: 805 SSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSL 864
Query: 513 MKEKNVQKQPGFSRVEKRNE 532
M+++ V+K P S ++ +N+
Sbjct: 865 MQQRGVKKNPSQSWIQLKNQ 884
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 195/447 (43%), Gaps = 87/447 (19%)
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
GN L+++Y+K L A ++F + + DV SWT +ISG+ + + + LF +M+ +G+
Sbjct: 324 GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGV 383
Query: 211 EPNQFTYNAIIASYARR-GDS----------------------NAAFAFFSRMTAEGFV- 246
PNQFT + ++ S + DS N+ ++ + G+
Sbjct: 384 CPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAE 443
Query: 247 --------PDLVTWNAMISGFAQ-------------------------------SKRENE 267
D V+WN M+S + Q + E
Sbjct: 444 KLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERV 503
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
AL+L M+ +G N +T + L + +G++IH V ++G+ D F ++LID
Sbjct: 504 ALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLID 563
Query: 328 MYSKCGSLKDARTLFE---------------ITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
MY KCG ++ A +F+ + SW++M+ Y ++G + +++
Sbjct: 564 MYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKT 623
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F M+ + ++ TL SV+SAC+ G++E G ++ ++ G + + ++DM
Sbjct: 624 FSFMICSQVEVDKFTLTSVVSACASAGVLELGRQV-HGYIQKIGHGLDVFLGSSIIDMYV 682
Query: 433 RSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD- 488
+ G + +A+ + Q + + SM +GC +HG+ AV + E G+ +
Sbjct: 683 KCGSLNDAWLIFNQAKDRNVVLWTSMI----SGCALHGQGREAVRLFELMINEGITPNEV 738
Query: 489 GFVMLSNICAADGEWHEAENLRKIMKE 515
FV + C+ G E ++M+E
Sbjct: 739 SFVGVLTACSHAGLLEEGCKYFRLMRE 765
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 128/253 (50%), Gaps = 17/253 (6%)
Query: 32 GKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM---------- 80
GKQ+H +L L+ +++ L+ +Y CG++ A ++F +P + M
Sbjct: 539 GKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAV 598
Query: 81 ---LNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
++W M S + G F++A+ FS M +KFT + V+ AC ++ G+QV
Sbjct: 599 VESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQV 658
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H ++G DV +G+++IDMY KCG L A +F+ +R+VV WTSMISG +
Sbjct: 659 HGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQG 718
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM-TAEGFVPDLVTWNA 254
EAV LFE M EG+ PN+ ++ ++ + + G +F M G P +
Sbjct: 719 REAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTC 778
Query: 255 MISGFAQSKRENE 267
M+ + ++ R NE
Sbjct: 779 MVDLYGRAGRLNE 791
>gi|147861249|emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
Length = 932
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 285/535 (53%), Gaps = 50/535 (9%)
Query: 24 MKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
+K+ LR+ ++ L T +S ++ YA G ++SA+ VFD + + NVF +W
Sbjct: 17 LKNNELRKAEK---LFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVF--SW 71
Query: 84 MVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
+ S + G +A F M +T ++ A GL+D Q +V Q
Sbjct: 72 TSLISGYFRDGQVAKACQLFDQMPA--KNVVSWTTMVLGYARNGLID-----QARSVFNQ 124
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
M +N +S A++ Y G A ++FH M +R++ SW +MISG + +V+EA L
Sbjct: 125 MPEKNTIS-WTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKL 183
Query: 202 FERMKLE----------GLEPNQFT-----------------YNAIIASYARRGDSNAAF 234
F M L GL N FT +NA+I +Y A
Sbjct: 184 FHLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEAS 243
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
F+ MT ++VTWNAMI G+A+ + + EA+K ML S I+PN T+T +L +
Sbjct: 244 ELFNLMTER----NIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTS- 298
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
G +++ + HAL +G + +ALI MYS+ G + +R FE + K+V SW
Sbjct: 299 -CWGMLEL-MQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWT 356
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
AM+ + HG D ++ +F ML+ G + +E+T + VLSACSH GLV+KG ++F SM
Sbjct: 357 AMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRA 416
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTN-SMAGAFRNGCNIHGRRDLAV 473
YG++ EHY+C+VD+L R+G++ EA D++ ++P + ++ GA C +HG ++A
Sbjct: 417 YGLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMPECERDGAVLGALLGACRLHGNVEMAD 476
Query: 474 TMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+G++ E+ G+V+L+N+ AA G W E +RK MK++NV+K PGFS++E
Sbjct: 477 YIGQKLIELQPNSSGGYVLLANVFAARGNWDEFAEVRKKMKDRNVRKVPGFSQIE 531
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 123/295 (41%), Gaps = 59/295 (20%)
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA 233
M D VS+T+MI+ Y +++ +A LF+ M + +A+I YA+ G ++A
Sbjct: 1 MPHHDNVSYTAMITAYLKNNELRKAEKLFQTMPDRTI----VAESAMIDGYAKAGLMDSA 56
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
F M ++ +W ++ISG+ + + +A +LF M
Sbjct: 57 QKVFDAMIDT----NVFSWTSLISGYFRDGQVAKACQLFDQMPAK--------------- 97
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
+V + + ++ Y++ G + AR++F KN SW
Sbjct: 98 ------------------------NVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISW 133
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
AM+ Y +G D +++LF M + N + +++S C G V + ++F M
Sbjct: 134 TAMMKSYVDNGRTDEALKLFHEMPQR----NLYSWNTMISGCLDGKRVNEAFKLFHLMPL 189
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNI 465
R V + +V L R+G A + Q+P + N+M A+ + C I
Sbjct: 190 RNAVS-----WTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLI 239
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
H D + +A+I Y K L+ A LF+ + + + +AMI Y K G++DS+ ++F+
Sbjct: 3 HHDNVSYTAMITAYLKNNELRKAEKLFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVFDA 62
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
M++ N + S++S G V K ++F M + V + +V R+G
Sbjct: 63 MID----TNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVS-----WTTMVLGYARNG 113
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
+ +A + Q+P T S ++ + +GR D A+ + F EM R + + +
Sbjct: 114 LIDQARSVFNQMPEKNTISWTAMMKSYVD-NGRTDEALKL---FHEMPQRNLYSWNTMIS 169
Query: 496 ICAADGEWHEAENLRKIMKEKN 517
C +EA L +M +N
Sbjct: 170 GCLDGKRVNEAFKLFHLMPLRN 191
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 174/535 (32%), Positives = 265/535 (49%), Gaps = 87/535 (16%)
Query: 32 GKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G+ HA+ D ++F + S L+ +Y G AR VFD +P N ++W M S
Sbjct: 127 GRLAHAVAIKMDSCRDVF-VGSSLMNMYCKAGLTPEARKVFDTMPERNS--VSWATMISG 183
Query: 90 FTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+ EA+G F LMR N+F F+ VL A + GKQ+H +A + G +
Sbjct: 184 YASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSI 243
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
VSVGNAL+ MY+KCG L A + F +++ ++W++MI+G D+A+ LF M L
Sbjct: 244 VSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHL 303
Query: 208 EGLEPNQFTYNAIIASYARRG---------DSNAAFAFFSR---MTA------------- 242
G+ P++FT+ +I + + G D F S+ MTA
Sbjct: 304 SGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVD 363
Query: 243 --EGF----VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
+GF PD+V W +MI G+ Q+ +AL L+ M + GI PN +T+ VL+A
Sbjct: 364 ARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSS 423
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+++ G++IHA + G ++V GSAL MY+KCG LKD +F ++V SWNAM
Sbjct: 424 LAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAM 483
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I ++G ++ELFE M EG + + VT +++LSACSH GLVE+G FR M + +G
Sbjct: 484 ISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFG 543
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
+ EHYAC+VD+L R+G++ EA + F I
Sbjct: 544 MDPRVEHYACMVDILSRAGKLKEAIE----------------FTESATID---------- 577
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
G W + E +R++MK + V K+PG S +E ++
Sbjct: 578 -----------------------HGMWEDVERVRRMMKLRGVSKEPGCSWIELKS 609
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 267/518 (51%), Gaps = 59/518 (11%)
Query: 26 SKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+++L++GK +HA + + + + + LV +YA C + A+ VF++I N +V N ++
Sbjct: 19 NRSLQKGKALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCII 78
Query: 86 MASAFTG--NFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
+ G + F MR N TF+ V A L+D G+ HAVA +M
Sbjct: 79 NGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMD 138
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
DV VG++L++MY K GL AR+VF M ER+ VSW +MISGY + EA+ LF
Sbjct: 139 SCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFR 198
Query: 204 RMKLEGLEPNQFTY-----------------------------------NAIIASYARRG 228
M+ E N+F + NA++ YA+ G
Sbjct: 199 LMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCG 258
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
+ A F + + + +TW+AMI+G AQS ++ALKLF M +SGI+P+ T
Sbjct: 259 SLDDALQTFETSSDK----NSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFV 314
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
GV+ A G+ G+++H + ++G ++ +AL+DMY+KC S+ DAR F+ +
Sbjct: 315 GVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEP 374
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
++ W +MIG Y ++G + ++ L+ RM EG+ NE+T+ SVL ACS +E+G +I
Sbjct: 375 DIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIH 434
Query: 409 -RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSM-AGAFRNGC 463
R++K +G+++ + + M + G + + + R++P + N+M +G +NGC
Sbjct: 435 ARTVKYGFGLEVPIG--SALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGC 492
Query: 464 NIHGRRDLAVTMGEEFFEMGLR--KPDGFVMLSNICAA 499
G+ L E F EM L KPD +V NI +A
Sbjct: 493 ---GKEAL-----ELFEEMQLEGTKPD-YVTFVNILSA 521
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 37/239 (15%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C AL QGKQ+HA + + S L +YA CG + LVF ++P +
Sbjct: 417 VLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARD 476
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG-KQVH 136
V N M+ + G +EA+ F M+ + + TF +L AC + +++G
Sbjct: 477 VISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFR 536
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSA------RRVFHGMFERDV----------- 179
+ + G + V ++D+ S+ G L A + HGM+E DV
Sbjct: 537 MMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMWE-DVERVRRMMKLRG 595
Query: 180 ------VSWTSMISG----------YCNVSKVD-EAVVLFERMKLEGLEPNQFTYNAII 221
SW + SG + + + E L ++MK EG EP +++A +
Sbjct: 596 VSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPATDSFSAAL 654
>gi|224071603|ref|XP_002303536.1| predicted protein [Populus trichocarpa]
gi|222840968|gb|EEE78515.1| predicted protein [Populus trichocarpa]
Length = 596
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 181/593 (30%), Positives = 289/593 (48%), Gaps = 74/593 (12%)
Query: 3 RLIFPINNLSVNYLDCLLGKCMKSK-ALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCG 61
+++F + +L++ L L + + Q KQ HA + N N +L+ LV
Sbjct: 9 QVLFGLFDLAIQMLAAKLTTILNNYLTANQAKQTHACIIINGFN--NLEPLLVRQILLSA 66
Query: 62 DVNSARL------VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFT 115
N R+ + +P+P+ F W + + G F+EA+ + M+ + F
Sbjct: 67 RNNPRRISQYVHSILYHLPHPDSFSWGWAIRYFSQQGQFKEALYLYVQMQRQGLCPSTFA 126
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSK--------------- 160
S L+A G +HA + + GF N V V AL+D+YSK
Sbjct: 127 VSSALRAYARTTYKMGGMSIHAESYKYGFSNCVYVQTALVDLYSKLGDMNTAQKVFDELA 186
Query: 161 ----------------CGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
G L A+RVF + ++DV+SW SMISGY + +D A VLF++
Sbjct: 187 EKNVVSWNSILSGHLKSGNLLEAQRVFDQISKKDVISWNSMISGYAKIGDMDRACVLFQQ 246
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP----------------- 247
M E N ++NA+I+ Y GD +A+ FF M V
Sbjct: 247 MP----EKNYSSWNALISGYVNCGDIKSAWRFFDAMPERNSVSWITMIAGYSKCGDVDSA 302
Query: 248 ----------DLVTWNAMISGFAQSKRENEALKLFKGML--VSGIKPNNVTVTGVLQAGG 295
DL+T+NAMIS FAQ+ + +AL LF ML + I+P+ +T+ V+ A
Sbjct: 303 SKLFDQIAKKDLLTFNAMISCFAQNSQPRKALWLFSEMLKAYANIQPDQMTLASVVSACS 362
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
G ++ I + V +G ID +AL+D+Y+KCGS+ A LF K+V +++A
Sbjct: 363 QLGDLRFASWIESYVNDLGTEIDDQLVTALLDLYAKCGSVDKAYELFHGLNKKDVVAYSA 422
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
MI G +G V +I+LF+ M++ + N T +L+AC+H GLV++G F SMK+ +
Sbjct: 423 MISGCGINGKVADAIKLFDMMVDAQIHPNLATFTGLLTACNHAGLVKEGYRFFSSMKD-H 481
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTM 475
G+ S +HYA +VD+L R+GR+ +AY+L++ +PM + + GA CN+H +L
Sbjct: 482 GLVPSTDHYAIMVDLLGRAGRLQDAYELIKSMPMQPHSGVWGALLLACNVHNNVELGEIA 541
Query: 476 GEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ F + + +L+NI ++ G W + LRK+ KEK + K G S E
Sbjct: 542 AQHCFNLETNATAYYSLLANIYSSAGRWDDVGRLRKLWKEKKLAKLSGCSWTE 594
>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
Length = 700
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 157/544 (28%), Positives = 276/544 (50%), Gaps = 38/544 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN------DLNIFSLKSKLVGVYAGCGDVNSARLVFDK 72
++ C A+ QG++V ++ + N+F ++ LV ++A CG ++ AR VF+
Sbjct: 156 VIKACAALGAVAQGRKVWEMVEADIASGNARPNVF-VQCALVDMFAKCGCLDEARNVFES 214
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ ++ M+ + +GN+ E + F+ MR + + + V+ AC +++ G
Sbjct: 215 MQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVG 274
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+H A + G D+ V NAL+DMY KCG + A +F +DVVSW+S+I GY
Sbjct: 275 TALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQN 334
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA----------------RRGDSNAAF-- 234
+ +V LF M G+ PN T +I+ + R G + F
Sbjct: 335 GMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVV 394
Query: 235 -AFFSRMTAEGFV------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
A + +G + DL WN+M++G+A + + A + + G+K
Sbjct: 395 SALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLK 454
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P++VTV VL + G+E+HA V + ++ +AL+DMY KCG L+ A+ +
Sbjct: 455 PDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEV 514
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F++ +N ++N +I +GKH D ++ F+ M +G+ ++VT +++LS CSH GL+
Sbjct: 515 FQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLI 574
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
+KGL ++ SM Y + KEHY+C+VD+ R G++ EA+ + + + G
Sbjct: 575 DKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLA 634
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C +H R D+A +G+ FE P ++LSNI A G W + +R +++E+N++K+
Sbjct: 635 ACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKE 694
Query: 522 PGFS 525
G S
Sbjct: 695 TGNS 698
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 238/502 (47%), Gaps = 63/502 (12%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREF 107
L ++LV YA GDV A VFD +P N F N ++ G F EA+ F ++ +
Sbjct: 85 LVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDG 144
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGN---------ALIDMY 158
+ FT+ V+KAC L + +G++V + E D++ GN AL+DM+
Sbjct: 145 SVAVDGFTYPPVIKACAALGAVAQGRKVWEMV-----EADIASGNARPNVFVQCALVDMF 199
Query: 159 SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYN 218
+KCG L AR VF M RD+ +WT+MI G + E V LF M+ EG +
Sbjct: 200 AKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAA 259
Query: 219 AIIASYARRGDSNAAFAFF-----SRMTAEGFVP-------------------------- 247
+I++ R G+ A S + + +V
Sbjct: 260 TVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSK 319
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
D+V+W+++I G++Q+ N ++ LF M+ GI PN+ T+ +L + I+ G+EIH
Sbjct: 320 DVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIH 379
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
R GL F SALID+YSK G ++ A T+F +T K++A WN+M+ Y +G D
Sbjct: 380 CFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSD 439
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
S+ + + G++ + VT++SVL C+ ++ +G E+ + +Y + +
Sbjct: 440 SAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKEL-HAYVIKYCINSVCSVNNAL 498
Query: 428 VDMLCRSGRM---VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
+DM C+ G + E + L+ + N + +F H D A++ FF++
Sbjct: 499 LDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGK----HNHEDQALS----FFDLMK 550
Query: 485 RK---PD--GFVMLSNICAADG 501
R PD FV L + C+ G
Sbjct: 551 RDGIAPDKVTFVALLSCCSHAG 572
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 181/410 (44%), Gaps = 53/410 (12%)
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D ++ +++HA G + + L+ Y+K G + A RVF GM R+ +W ++I
Sbjct: 63 DFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIK 122
Query: 188 GYCNVSKVDEAVVLFERMKLEG-------------------------------------- 209
G + + EA+ +F M +G
Sbjct: 123 GLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVEADIAS 182
Query: 210 --LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
PN F A++ +A+ G + A F M V DL W AMI G S E
Sbjct: 183 GNARPNVFVQCALVDMFAKCGCLDEARNVFESMQ----VRDLAAWTAMIGGTVHSGNWLE 238
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
+ LF M G +++ V+ A G G +Q+G +H + G D++ +AL+D
Sbjct: 239 VVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVD 298
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MY KCG ++ A LF T K+V SW+++I Y ++GM + S+ LF M+ G+ N T
Sbjct: 299 MYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSST 358
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG--RMVEA-YDLL 444
L S+L S L+ G EI R+G++ S+ + ++D+ + G R+ E + L
Sbjct: 359 LASILPCLSVLKLIRSGKEI-HCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLT 417
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
+ + NSM + ++G D A ++GL KPD ++S
Sbjct: 418 LDKDLAIWNSMVAGYA----VNGYSDSAFCALRLLQKVGL-KPDHVTVVS 462
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 242/462 (52%), Gaps = 33/462 (7%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL-LCSARRV 170
N FT S VLKAC G+ + G+ VH +A + G + + V NAL+DMY+ C + + A V
Sbjct: 92 NAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMV 151
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F G+ ++ VSWT++I+GY + + +F +M LE +E N F+++ + + G
Sbjct: 152 FRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSH 211
Query: 231 NAAFAFFSRMTAEGF---VP----------------------------DLVTWNAMISGF 259
+ +T GF +P DL+TWN +I+G+
Sbjct: 212 TFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGY 271
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
+S E+L +F M G PN T T ++ A + G++IH + R GL ++
Sbjct: 272 ERSN-PTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNL 330
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+ALIDMYSKCG++ D+ +F +++ SW AM+ YG HG + ++ELF++M+
Sbjct: 331 ALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRS 390
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G+R + V +++LSACSH GLV++GL F+ M Y + +E Y CVVD+L R+G++ E
Sbjct: 391 GIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEE 450
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
AY+L+ +P + G F C H +L ++ +VMLSNI AA
Sbjct: 451 AYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAA 510
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNE 541
DG+W E LRK+MK +K+ G S VE N V +E
Sbjct: 511 DGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDE 552
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 82/200 (41%), Gaps = 10/200 (5%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C L G+Q+H + L+ +L + L+ +Y+ CG++ + VF + +
Sbjct: 301 IMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRD 360
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQV 135
+ M++ G +EA+ F M R ++ F +L AC GL+D + +
Sbjct: 361 LVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVD-EGLRYF 419
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISG-----Y 189
+ D + ++D+ + G + A + M F+ D W + +
Sbjct: 420 KLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTF 479
Query: 190 CNVSKVDEAVVLFERMKLEG 209
N+ K+ +L R + G
Sbjct: 480 PNLGKLAAHRILDLRPHMAG 499
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 164/515 (31%), Positives = 268/515 (52%), Gaps = 16/515 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI---FSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
LL C K LR Q+H L ++ F+ K L + + AR + P
Sbjct: 3 LLNSC---KNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 59
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
P+ FM N +V + + ++ F +MR+ + F+F+ V+KA ++ G Q
Sbjct: 60 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 119
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H A + G E+ + VG LI MY CG + AR+VF M + ++V+W ++I+ +
Sbjct: 120 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 179
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
V A +F++M L N ++N ++A Y + G+ +A FS M D V+W+
Sbjct: 180 VAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHR----DDVSWST 231
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MI G A + NE+ F+ + +G+ PN V++TGVL A +GS + G+ +H V + G
Sbjct: 232 MIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAG 291
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN-VASWNAMIGCYGKHGMVDSSIELF 373
V +ALIDMYS+CG++ AR +FE + K + SW +MI HG + ++ LF
Sbjct: 292 YSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLF 351
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
M G+ + ++ IS+L ACSH GL+E+G + F MK Y ++ EHY C+VD+ R
Sbjct: 352 NEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGR 411
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
SG++ +AYD + Q+P+ T + C+ HG +LA + + E+ V+L
Sbjct: 412 SGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLL 471
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
SN A G+W + ++RK M + ++K +S VE
Sbjct: 472 SNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVE 506
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 266/519 (51%), Gaps = 36/519 (6%)
Query: 42 NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF 101
+D+N L + ++ VY CG++ +R +FD + + ++ N ++ A A GN E +
Sbjct: 192 SDIN---LSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLL 248
Query: 102 SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC 161
MR + TF VL ++K G+ +H + GF D V +LI +Y K
Sbjct: 249 KTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKG 308
Query: 162 GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII 221
G + A R+F ++DVV WT+MISG D+A+ +F +M G++P+ T ++I
Sbjct: 309 GKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVI 368
Query: 222 ASYARRGDSNAAFAFFSRM----------TAEGFVP---------------------DLV 250
+ A+ G N + + T V DLV
Sbjct: 369 TACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLV 428
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
+WNAM++G+AQ+ EAL LF M P+++T+ +LQ TG + +G+ IH+ V
Sbjct: 429 SWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFV 488
Query: 311 CRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
R GL + ++L+DMY KCG L A+ F ++ SW+A+I YG HG ++++
Sbjct: 489 IRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAAL 548
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
+ + LE GM+ N V +SVLS+CSH GLVE+GL I+ SM + +G+ EH+ACVVD+
Sbjct: 549 RFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDL 608
Query: 431 LCRSGRMVEAYDLL-RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
L R+GR+ EAY++ ++ P V + + G + C +G +L T+ + +
Sbjct: 609 LSRAGRVEEAYNVYKKKFPDPVLDVL-GIILDACRANGNNELGDTIANDILMLRPMDAGN 667
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
FV L++ A+ +W E M+ ++K PG+S ++
Sbjct: 668 FVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFID 706
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/531 (27%), Positives = 256/531 (48%), Gaps = 40/531 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C G +H + + L++ + + S L+ YA G + AR VFD +P N
Sbjct: 67 LLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERN 126
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V ++ + TG EA F MR + + T VL G+ ++ + +H
Sbjct: 127 VVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVT---VLSLLFGVSELAHVQCLHG 183
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
A GF +D+++ N+++++Y KCG + +R++F M RD+VSW S+IS Y + + E
Sbjct: 184 CAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICE 243
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV----------- 246
++L + M+L+G E T+ ++++ A RG+ ++ GF
Sbjct: 244 VLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIV 303
Query: 247 --------------------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
D+V W AMISG Q+ ++AL +F+ ML G+KP+ T
Sbjct: 304 VYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTAT 363
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ V+ A GS +G I + R L +DV T ++L+ MY+KCG L + +F++
Sbjct: 364 MASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMN 423
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+++ SWNAM+ Y ++G V ++ LF M + + +T++S+L C+ G + G
Sbjct: 424 RRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKW 483
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
I S R G++ +VDM C+ G + A Q+P + S + A G H
Sbjct: 484 I-HSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWS-AIIVGYGYH 541
Query: 467 GRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRKIMKE 515
G+ + A+ +F E G+ KP+ + LS + C+ +G + N+ + M +
Sbjct: 542 GKGEAALRFYSKFLESGM-KPNHVIFLSVLSSCSHNGLVEQGLNIYESMTK 591
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 200/428 (46%), Gaps = 44/428 (10%)
Query: 73 IPNP-NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+P+P +N + + G + + ++ M + + +TF +LKAC L
Sbjct: 20 LPHPATTNSVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSL 79
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G +H G D + ++LI+ Y+K G AR+VF M ER+VV WT++I Y
Sbjct: 80 GLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSR 139
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------NA 219
+V EA LF+ M+ +G++P+ T N+
Sbjct: 140 TGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQCLHGCAILYGFMSDINLSNS 199
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ Y + G+ + F M DLV+WN++IS +AQ E L L K M + G
Sbjct: 200 MLNVYGKCGNIEYSRKLFDYMDHR----DLVSWNSLISAYAQIGNICEVLLLLKTMRLQG 255
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ T VL G +++GR +H + R G ++D ++LI +Y K G + A
Sbjct: 256 FEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAF 315
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+FE + K+V W AMI ++G D ++ +F +ML+ G++ + T+ SV++AC+ G
Sbjct: 316 RMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLG 375
Query: 400 LVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSM 455
G I +++ + ++ ++ +V M + G + ++ +D++ + + N+M
Sbjct: 376 SYNLGTSILGYILRQELPLDVATQN--SLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAM 433
Query: 456 -AGAFRNG 462
G +NG
Sbjct: 434 VTGYAQNG 441
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 28/262 (10%)
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
NA I+ + ++ L + ML + + + T +L+A +G +H +
Sbjct: 30 NATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILV 89
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
GL +D + S+LI+ Y+K G AR +F+ +NV W +IGCY + G V + L
Sbjct: 90 SGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSL 149
Query: 373 FERMLEEGMRANEVTLISVL--------SACSHGGLVEKG----LEIFRSMKERYGVKIS 420
F+ M +G++ + VT++S+L C HG + G + + SM YG K
Sbjct: 150 FDEMRRQGIQPSSVTVLSLLFGVSELAHVQCLHGCAILYGFMSDINLSNSMLNVYG-KCG 208
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF 480
Y+ + +D + + NS+ A+ NI L TM + F
Sbjct: 209 NIEYS------------RKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGF 256
Query: 481 EMGLRKPDGFVMLSNICAADGE 502
E G P F + ++ A+ GE
Sbjct: 257 EAG---PQTFGSVLSVAASRGE 275
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 160/507 (31%), Positives = 265/507 (52%), Gaps = 42/507 (8%)
Query: 29 LRQGKQVHALLCTNDLNIFSLKS--KLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
LR G A +D+ + + S L+ VYA GD+ AR V D +P N ++
Sbjct: 293 LRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGARRVLDAMPARNEVSWGTLIA 352
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
G+ EA+ +S M R N FS VL AC L D++ G ++HA A +MG
Sbjct: 353 RHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSST 412
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
++ V ++LIDMY KC A+RVF+ + E+
Sbjct: 413 NLFVSSSLIDMYCKCKQCTYAQRVFNSLPEK----------------------------- 443
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
N +N++I+ Y+ G A F++M A + V+WN MISG+A+++R
Sbjct: 444 ------NTVCWNSLISGYSWNGKMVEAEGLFNKMPAR----NSVSWNTMISGYAENRRFG 493
Query: 267 EALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI 326
+AL F ML SG P +T++ VL A S+++GR +HA + ++G+ ++F G+AL
Sbjct: 494 DALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALS 553
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
DMY+K G L +R +F KN +W AM+ ++G + SI LFE M+E G+ NE
Sbjct: 554 DMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEH 613
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T +++L ACSH GLVE+ + F +M + +G+ +HY C+VD+L R+G + EA +LL +
Sbjct: 614 TFLAILFACSHCGLVEQAIHYFETM-QAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMK 672
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
V + S + + C+ + +++ ++ E+ G+V+LSN+ A+ G+W +A
Sbjct: 673 VSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDA 732
Query: 507 ENLRKIMKEKNVQKQPGFSRVEKRNEF 533
R +M+ +++K G S ++ R ++
Sbjct: 733 AETRILMQGASLKKDAGCSWLQLRGQY 759
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 197/496 (39%), Gaps = 106/496 (21%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV--------------------------- 85
+V + GD+ SAR +F +P +V MV
Sbjct: 155 MVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFF 214
Query: 86 --MASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL--LDIKKGKQVHAVA 139
M S F N ++A F M R N T V+KACVG D+ G AV
Sbjct: 215 TAMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVK 274
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
+ FE + V N+LI +Y + G +A RVF M RDVVSWT+++ Y ++ + A
Sbjct: 275 CNL-FEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGAR 333
Query: 200 VLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
+ + M N+ ++ +IA + ++GD+ A +S+M A+G
Sbjct: 334 RVLDAMPAR----NEVSWGTLIARHEQKGDTAEALKLYSQMLADG--------------- 374
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
+PN + VL A ++ G IHA +MG ++
Sbjct: 375 --------------------CRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNL 414
Query: 320 FTGSALIDMYSKC-------------------------------GSLKDARTLFEITRIK 348
F S+LIDMY KC G + +A LF +
Sbjct: 415 FVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPAR 474
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
N SWN MI Y ++ ++ F ML G E+TL SVL AC++ +E G +
Sbjct: 475 NSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVH 534
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
+ + G++ + + DM +SG + + + Q+P N A G +G
Sbjct: 535 AEIV-KLGIEDNIFMGTALSDMYAKSGDLDSSRRVFYQMPEK-NNITWTAMVQGLAENGF 592
Query: 469 RDLAVTMGEEFFEMGL 484
+ ++++ E+ E G+
Sbjct: 593 AEESISLFEDMIENGI 608
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 162/522 (31%), Positives = 256/522 (49%), Gaps = 43/522 (8%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+++ L+ +Y G V AR VFD + N +V N M+ G +A+ F M
Sbjct: 154 VQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEG 213
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ T +L C L ++ G+ VH + + + + V NAL++MY KCG + AR
Sbjct: 214 VDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEAR 273
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
VF M RDV++WT MI+GY V+ A+ L M+ EG+ PN T
Sbjct: 274 FVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDAL 333
Query: 218 ------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
++I+ YA+ + F FS + P W+
Sbjct: 334 KLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGP----WS 389
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
A+I+G Q++ +AL LFK M ++PN T+ +L A ++ IH + +
Sbjct: 390 AIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKT 449
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLF----EITRIKNVASWNAMIGCYGKHGMVDSS 369
G + + L+ +YSKCG+L+ A +F E + K+V W A+I YG HG ++
Sbjct: 450 GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+++F M+ G+ NE+T S L+ACSH GLVE+GL +F M E Y HY C+VD
Sbjct: 510 LQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVD 569
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
+L R+GR+ EAY+L+ +P T+++ GA C H L + FE+
Sbjct: 570 LLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFELEPENTGN 629
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
+V+L+NI AA G W + E +R +M+ ++K+PG S +E R+
Sbjct: 630 YVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEIRS 671
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 139/548 (25%), Positives = 238/548 (43%), Gaps = 46/548 (8%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARL 68
N LSV LL ++++ + K +H + T + S L YA CG + AR
Sbjct: 11 NALSVKQYQSLLNHYAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHIAYARK 70
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC--NKFTFSIVLKACVGL 126
+FD++P ++ N ++ G + +AI F M +C + +T+ V KA L
Sbjct: 71 LFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGEL 130
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
I G +H + F D V NAL+ MY G + AR VF M RDV+SW +MI
Sbjct: 131 KSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMI 190
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------------------------- 217
SGY +++A+++F+ M EG++P+ T
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLG 250
Query: 218 ------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
NA++ Y + G + A F RM D++TW MI+G+ + AL+L
Sbjct: 251 DKIEVKNALVNMYLKCGRMDEARFVFGRMERR----DVITWTCMINGYIEDGDVENALEL 306
Query: 272 FKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSK 331
+ M G++PN VT+ ++ A G + G+ +H R + D+ ++LI MY+K
Sbjct: 307 CRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAK 366
Query: 332 CGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
C + +F + W+A+I ++ +V +++LF+RM E + N TL S+
Sbjct: 367 CKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSL 426
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
L A + + + + I + + G S + +V + + G + A+ + +
Sbjct: 427 LPAYATLADLRQTMNIHCYLT-KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKH 485
Query: 452 TNS---MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAE 507
+ + GA +G +HG A+ + E G+ + F N C+ G E
Sbjct: 486 KSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGL 545
Query: 508 NLRKIMKE 515
L M E
Sbjct: 546 TLFSFMLE 553
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 194/450 (43%), Gaps = 54/450 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C K L G+ VH L+ L + +K+ LV +Y CG ++ AR VF ++ +
Sbjct: 224 MLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRD 283
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V M+ G+ + A+ LM+ R N T + ++ AC L + GK +H
Sbjct: 284 VITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHG 343
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
A + +D+ + +LI MY+KC + RVF G W+++I+G V +
Sbjct: 344 WAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRD 403
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP---------- 247
A+ LF+RM+ E +EPN T N+++ +YA D +T GF+
Sbjct: 404 ALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVH 463
Query: 248 -------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
D+V W A+ISG+ + AL++F M+ SG+ P
Sbjct: 464 VYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTP 523
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS----ALIDMYSKCGSLKDA 338
N +T T L A +G ++ G + + + H S ++D+ + G L +A
Sbjct: 524 NEITFTSALNACSHSGLVEEGLTLFSFMLE---HYKTLARSNHYTCIVDLLGRAGRLDEA 580
Query: 339 RTLFEITRIKNVAS-WNAMIGCYGKHGMVD----SSIELFERMLEEGMRANEVTLISVLS 393
L + ++ W A++ H V ++ +LFE LE N V L ++ +
Sbjct: 581 YNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFE--LEPENTGNYVLLANIYA 638
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
A K +E R+M E G++ H
Sbjct: 639 ALGRW----KDMEKVRNMMENVGLRKKPGH 664
>gi|224124454|ref|XP_002330027.1| predicted protein [Populus trichocarpa]
gi|222871452|gb|EEF08583.1| predicted protein [Populus trichocarpa]
Length = 502
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 259/494 (52%), Gaps = 43/494 (8%)
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
+P +V L M+ + +A F +++ N FT S VLKAC G+ +
Sbjct: 1 MPERDVVALTAMISGYTHCNEYTQAWSVFVDMVKNDNVPPNAFTISSVLKACKGMNSVFC 60
Query: 132 GKQVHAVATQMGF-ENDVSVGNALIDMYSKCGL-LCSARRVFHGMFERDVVSWTSMISGY 189
G VH +A + F E + V NAL+DMY+ CG+ + A VFH + E++VVSWT++I+GY
Sbjct: 61 GGLVHGLAIKRRFVEGFIYVDNALMDMYATCGVTMRDACVVFHDIKEKNVVSWTTLIAGY 120
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------------- 217
+ AV +F + LEG E N +
Sbjct: 121 THRGNGSRAVQVFREISLEGAELNPHSISIAVRACASVGSNILGRQIHTAVIKHGFESDL 180
Query: 218 ---NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
N+I+ Y R G + A +F+ M+ + DL+TWN +I+G+ +S E L +F
Sbjct: 181 PVMNSILDMYCRCGCLSEAKEYFNEMSEK----DLITWNTLIAGYERSD-SIEPLFIFSQ 235
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M G PN T T ++ A ++Q G+++H + R GL ++ +ALIDMY+KCG+
Sbjct: 236 MESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGN 295
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
+ D++ F N+ SW +M+ YG HG ++ELF+ M+ G+R ++V ++VL A
Sbjct: 296 IIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHA 355
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS 454
CSH GLV++GL F M + Y +K ++E Y CVV +L R+GR+ EAY L+R +P S
Sbjct: 356 CSHAGLVDQGLRYFNCMLDDYHIKPNQEIYGCVVGLLGRAGRVEEAYHLIRSMPFMADES 415
Query: 455 MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMK 514
+ GA C H L ++ + + +VMLSNI AA+G+W EAE +RK+MK
Sbjct: 416 VWGALLGACKAHNLSKLGKLAAKKALALKPNMVETYVMLSNIYAAEGKWGEAERMRKLMK 475
Query: 515 EKNVQKQPGFSRVE 528
+K+ G S +E
Sbjct: 476 RAGSKKEAGRSWIE 489
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 29 LRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+ G+QVH + L+ L + L+ +YA CG++ ++ F ++ N+ M++
Sbjct: 261 LQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIG 320
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLD 128
G +EA+ F M R ++ F VL AC GL+D
Sbjct: 321 YGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVD 363
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 167/503 (33%), Positives = 259/503 (51%), Gaps = 41/503 (8%)
Query: 27 KALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
K Q Q+HA + + L+ + + S + V + A LVF + NPN+ + N M+
Sbjct: 20 KTRTQLPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMI 79
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
+ G + ++ FS M+ ++FTF+ +LK+C G+ D + GK VH V +GFE
Sbjct: 80 KGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGVHGVVIVVGFE 139
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
S+ +ID+Y+ CG + A++VF M +RDV+ W
Sbjct: 140 RFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDVIVW----------------------- 176
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
N +I + + GD F F +M +V+WN+MI+G QS R+
Sbjct: 177 ------------NMMIRGFCKVGDIEMGFRLFRQMRDRS----VVSWNSMIAGLEQSGRD 220
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT-GSA 324
EAL+LF+ M G +P++ TV +L G++ +G IH+ L D + G++
Sbjct: 221 GEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVGEWIHSYAESSRLLRDFISVGNS 280
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+D Y KCG L+ A +F KNV SWNAMI +G + +LFE M+ +G+R N
Sbjct: 281 LVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPN 340
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
+ T + VLS C+H GLVE+G +F SM + ++ EH+ C+VD+L R+G M EA DL+
Sbjct: 341 DATFVGVLSCCAHAGLVERGRNLFTSMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLV 400
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
R +PM + G+ + G A +E E+ +V+LSN+ A DG+W
Sbjct: 401 RTMPMRPNAVLWGSLLSAYRTIGDVKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWD 460
Query: 505 EAENLRKIMKEKNVQKQPGFSRV 527
E E +R +MKEKN++K PG S V
Sbjct: 461 EVEKVRALMKEKNIRKNPGQSMV 483
>gi|255561305|ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539054|gb|EEF40650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 578
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 169/554 (30%), Positives = 290/554 (52%), Gaps = 48/554 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
++ C S G Q+++++ + L+ F + + + YA SA VFD +P +
Sbjct: 32 VIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICNSFISFYAKSSCTESALKVFDTMPLKD 91
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFS---LMREFIYRCNKFT----FSIVLKACVGLLDIK 130
N ++ G FQ GYF+ +M + +Y C + V+ CV L D+K
Sbjct: 92 PISWNCII-----NGYFQN--GYFTQGFIMFKEMYECGIVPKPELVASVVSVCVRLGDMK 144
Query: 131 KGKQVHAVATQMG-FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
G+ +HA+ G ++ V +L+D Y K G A RVF + ++VVSWT+++SG
Sbjct: 145 LGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALVSGC 204
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAF-------- 236
+ A+ F M++ G+ PN+ T AI+ ++A + G +AF
Sbjct: 205 SANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDH 264
Query: 237 ------------------FSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
+++T E V D+V W+++I + +S EALKLF+ M
Sbjct: 265 HFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSYCRSADSIEALKLFRWMRA 324
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G +PN+VT+ V+ A S++ G H + + GL+ D + G+ALI+MYSKCG +
Sbjct: 325 DGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVA 384
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+ +F+ IK+ SW+ +I YG HG ++ LF M +G+ + +T ++VLSAC+H
Sbjct: 385 SHQIFKEMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQGVEPDAMTFLAVLSACNH 444
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
GLV++G +IF ++K+ V ++ EHYAC+VD+L +SG++ +A+D+LR +PM + ++
Sbjct: 445 SGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLLGKSGKVDDAFDILRAMPMKPSTTIWS 504
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
+ + C IHGR ++A + +E + +LS I A G W E++R++M+ +
Sbjct: 505 SLVSACKIHGRLEIAERLAQELIKSEPSNAANHTLLSMIYAESGNWFAVEDVRRLMRVQG 564
Query: 518 VQKQPGFSRVEKRN 531
+ K GFS+V N
Sbjct: 565 LSKCYGFSQVSAGN 578
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 5/210 (2%)
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
++ LK +K + S I N + V++A + G +++++V + GL D ++
Sbjct: 8 HQILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICNSF 67
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
I Y+K + A +F+ +K+ SWN +I Y ++G +F+ M E G+
Sbjct: 68 ISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKP 127
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY--ACVVDMLCRSGRMVEAYDL 443
+ SV+S C G ++ G I + +I+KE + +VD +SG + A +
Sbjct: 128 ELVASVVSVCVRLGDMKLGRAIHALV--LIDGRIAKEIFVLTSLVDWYFKSGDSLMALRV 185
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAV 473
Q+ + S A +GC+ + ++A+
Sbjct: 186 FDQIEVKNVVSWT-ALVSGCSANLDYNMAL 214
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 148/476 (31%), Positives = 252/476 (52%), Gaps = 43/476 (9%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
GDV++AR F++I + N M+ +G EA F M ++FTF+ +L
Sbjct: 244 GDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLL 303
Query: 121 KACVGLLDIKKGKQVHA--VATQMGF--ENDVSVGNALIDMYSKCGLLCSARRVFHGMFE 176
AC GK VH + Q F E + V NAL+ +YSK G + A ++F M
Sbjct: 304 SACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTL 363
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAF 236
+DVVSW +++SGY +D A +F+ M +
Sbjct: 364 KDVVSWNTILSGYIESGCLDNAARIFKEMPYKSE-------------------------- 397
Query: 237 FSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL 296
++W M+SG+ +ALKLF M +KP + T G + A G
Sbjct: 398 -------------LSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGE 444
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
G+++ G+++HA + + G G+AL+ MY++CG++KDAR +F + + SWNAM
Sbjct: 445 LGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAM 504
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I G+HG ++ELF++M+ +G+ + ++ +++L+AC+H GLV+ G + F SM+ +G
Sbjct: 505 ISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFG 564
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
+ ++HYA ++D+L R+GR+ EA DL++ +P T ++ A +GC I+G +L
Sbjct: 565 ISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAA 624
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
++ F+M +++LSN +A G W +A +RK+M+++ V+K+PG S +E N+
Sbjct: 625 DQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNK 680
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 176/391 (45%), Gaps = 57/391 (14%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIP--NPNVFMLNWMVMASAFTGNFQEAIGYFS--LMRE 106
+ LV YA G + + FD +P + + N M+ A A A+ F L +
Sbjct: 93 TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASD 152
Query: 107 FIYRCNKFTFSIVLKACVGLLD--IKKGKQVHAVATQMGFENDVSVGNALIDMYSKC--- 161
R + ++F+ +L A + D + Q+H ++G +SV NALI +Y KC
Sbjct: 153 DSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAP 212
Query: 162 GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII 221
G+ AR+V M E+D ++WT+ I+
Sbjct: 213 GVTRDARKVLDEMPEKDELTWTT-----------------------------------IV 237
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ R+GD +AA + F + E V WNAMISG+ QS EA +LF+ M+ I
Sbjct: 238 VGHVRKGDVHAARSAFEEIDGEFDV----VWNAMISGYVQSGMCAEAFELFRRMVSKRIP 293
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI----DVFTGSALIDMYSKCGSLKD 337
P+ T T +L A G G+ +H R+ + +AL+ +YSK G +
Sbjct: 294 PDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAV 353
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A +F+ +K+V SWN ++ Y + G +D++ +F+ M + +E++ + ++S H
Sbjct: 354 ATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYK----SELSWMVMVSGYVH 409
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVV 428
GGL E L++F M+ VK YA V
Sbjct: 410 GGLAEDALKLFNQMRSE-DVKPCDYTYAGAV 439
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 152/310 (49%), Gaps = 12/310 (3%)
Query: 45 NIFSLKSKLVG-VYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYF 101
++ S + L G + +GC D N+AR +F ++P + L+WMVM S + G ++A+ F
Sbjct: 365 DVVSWNTILSGYIESGCLD-NAAR-IFKEMPYKS--ELSWMVMVSGYVHGGLAEDALKLF 420
Query: 102 SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC 161
+ MR + +T++ + AC L +K GKQ+HA Q GFE S GNAL+ MY++C
Sbjct: 421 NQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARC 480
Query: 162 GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII 221
G + AR VF M D VSW +MIS EA+ LF++M +G+ P++ ++ I+
Sbjct: 481 GAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTIL 540
Query: 222 ASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
+ G + F +F M + G P + +I ++ R EA L K M
Sbjct: 541 TACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTM---PF 597
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+P +L + G +++G + +M D T L + YS G DA
Sbjct: 598 EPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHD-GTYILLSNTYSAAGRWVDAAR 656
Query: 341 LFEITRIKNV 350
+ ++ R + V
Sbjct: 657 VRKLMRDRGV 666
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
+ C + AL+ GKQ+HA L S + L+ +YA CG V ARLVF +PN +
Sbjct: 439 VAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDS 498
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQ-V 135
N M+ A G+ +EA+ F M ++ +F +L AC GL+D G Q
Sbjct: 499 VSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVD--DGFQYF 556
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISG 188
++ G LID+ + G + AR + M FE W +++SG
Sbjct: 557 ESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSG 610
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 169/567 (29%), Positives = 281/567 (49%), Gaps = 72/567 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALL-------CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
LL C K++R+ KQ+HA + T L I SL +K+ + DV+ A D
Sbjct: 32 LLSSC---KSVREIKQIHASIIKANTTRSTTTLPIISLCTKITSLLQQ--DVHLA----D 82
Query: 72 KIPN-------------PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIY---RCNKFT 115
I N V++ N ++ + + + N I FSL R+ + + +T
Sbjct: 83 SIQNLWYASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHI--FSLYRQMLLIGLSPDTYT 140
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+LKAC + Q+HA + + G +++ V N L+ Y+ G + + +VF
Sbjct: 141 LPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGP 200
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERM------------------------------ 205
D++SWT++I Y + EA+ F RM
Sbjct: 201 HWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCTADRMTLVVVLSACSQLGDFTLGKKILA 260
Query: 206 ----KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
L + + F NA++ Y + G + A F M V +LV+WN+MISG A
Sbjct: 261 YMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMP----VKNLVSWNSMISGLAH 316
Query: 262 SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFT 321
EAL +F+ M G+KP++VT+ GVL + G +++G+ +H+ + + + D +
Sbjct: 317 QGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYV 376
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
+AL+DMY+KCGS+ A +F+ + K+V S+ AMI + HG D ++ +F M G+
Sbjct: 377 ANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGV 436
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
R + VTL+ VLSACSH GL+E+G F+ M Y ++ EHY C+VD+L R+G + EA
Sbjct: 437 RPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAE 496
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
++P+ S+ G+ C IH + +L T+ ++ EM + ++++SNI ++
Sbjct: 497 AFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEMEPERDGAYILMSNIYSSAN 556
Query: 502 EWHEAENLRKIMKEKNVQKQPGFSRVE 528
W +A RK MK+ N++K PG S +E
Sbjct: 557 RWRDALKWRKAMKQNNIKKTPGCSSIE 583
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 196/409 (47%), Gaps = 59/409 (14%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L LL C +S A + Q+HA L N+F +K+ L+ YA G + + VFD+
Sbjct: 141 LPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLF-VKNTLMRFYAVSGFIEAVEKVFDQG 199
Query: 74 PNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRC--NKFTFSIVLKACVGLLDI 129
P+ + +++W + A++ G EAI F F C ++ T +VL AC L D
Sbjct: 200 PHWD--LISWTTLIQAYSKMGYPSEAIAAF-----FRMNCTADRMTLVVVLSACSQLGDF 252
Query: 130 KKGKQVHAVATQMGFE--NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
GK++ A F+ +DV +GNAL+DMY KCG AR++FH M +++VSW SMIS
Sbjct: 253 TLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMIS 312
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------------------------ 217
G + EA+ +F RM+ GL+P+ T
Sbjct: 313 GLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKA 372
Query: 218 -----NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLF 272
NA++ YA+ G + AF F M + D+ ++ AMI GFA + + AL +F
Sbjct: 373 DGYVANALVDMYAKCGSIDQAFMVFQAMKCK----DVYSYTAMIVGFAMHGKADRALAIF 428
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS--ALIDMYS 330
M G++P++VT+ GVL A G ++ GR + R+ H+ T ++D+
Sbjct: 429 SEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRL-YHLQPQTEHYGCMVDLLG 487
Query: 331 KCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+ G + +A ++ + + + W +++G H V+ + ++++E
Sbjct: 488 RAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIE 536
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 265/521 (50%), Gaps = 43/521 (8%)
Query: 9 NNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSAR 67
+NL+ YL C + K + G+ H + + +++ L+ +Y G++ A+
Sbjct: 156 DNLTFIYL---FKACSRVKDVLHGQVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQ 212
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
VFDK+ + ++ N ++ + F+E + F+LMRE + T V+ AC L
Sbjct: 213 KVFDKMDDRDLVSWNSLICGYSQCNRFKEVLDLFNLMREANVTADSVTMVKVILACSYLC 272
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+ + + DV +GN+LIDMY + GL+ ARRVF
Sbjct: 273 EDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVF---------------- 316
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
+RM+ E N ++NA++ YA GD AA F+ M +
Sbjct: 317 ---------------DRMQ----EKNIVSWNAMLTGYATAGDLVAAKKLFNEMP----IR 353
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
++++W MISG AQ+ + ++ALKLF+ M+ + +KP+ +TV+ VL A G + G+ +H
Sbjct: 354 NVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVH 413
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+CR + DV+ G+ALIDMY KCG + A +F + K+ SW +MI +G VD
Sbjct: 414 EYMCRHDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVD 473
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+ ELF +ML +G++ + I +L AC+H GLV+KGLE F SM+ YG++ +HY CV
Sbjct: 474 NVFELFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCV 533
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
VD+L RSG + AY+ ++Q+P+ + + C +H LA + E+
Sbjct: 534 VDLLSRSGELDRAYEFIKQMPVVPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNS 593
Query: 488 DGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+V+LSN A W +A +R +M +VQK +S +E
Sbjct: 594 GNYVLLSNTYAGSDRWDDASRMRDLMVVGDVQKPSSWSSIE 634
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 152/315 (48%), Gaps = 23/315 (7%)
Query: 213 NQFTYNAIIASYA--RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
N + + +I SYA R + A FAF P L+ +N +I G +QS+ NEA+
Sbjct: 88 NPKSMSNVIKSYALSRSHLNKANFAFIQIGQ-----PTLLIFNYLIRGLSQSENPNEAIV 142
Query: 271 LFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
++ ++ + GI +N+T + +A + G+ H V ++G +F ++LI MY
Sbjct: 143 MYSDLMYNQGILGDNLTFIYLFKACSRVKDVLHGQVFHVQVLKLGFGSYLFIENSLIRMY 202
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
G L A+ +F+ +++ SWN++I Y + ++LF M E + A+ VT++
Sbjct: 203 GYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFKEVLDLFNLMREANVTADSVTMV 262
Query: 390 SVLSACSHGGLVEKGL--EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLL 444
V+ ACS+ L E G+ + + +++++ V I ++DM R G + A +D +
Sbjct: 263 KVILACSY--LCEDGVVDSMVKYIEDKH-VDIDVYLGNSLIDMYGRRGLVDLARRVFDRM 319
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
++ + N+M + ++ + L F EM +R + + + CA +
Sbjct: 320 QEKNIVSWNAMLTGYATAGDLVAAKKL-------FNEMPIRNVISWTCMISGCAQANQCS 372
Query: 505 EAENLRKIMKEKNVQ 519
+A L + M + NV+
Sbjct: 373 DALKLFQEMMDANVK 387
>gi|38347497|emb|CAE05845.2| OSJNBa0091C07.7 [Oryza sativa Japonica Group]
Length = 749
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 167/576 (28%), Positives = 284/576 (49%), Gaps = 69/576 (11%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LG C + + LR G QVH + + + F + + L+ Y+ C D+++AR +FD + N
Sbjct: 119 LGACARGRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNE 178
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLM---REFI---------------YRC--------- 111
+ + MV+A +A+ M R+ Y C
Sbjct: 179 LLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQL 238
Query: 112 --------NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
N+FT+ VL+ACV + ++ G+ +H Q GFE++ + +AL+D+Y + G
Sbjct: 239 LAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGA 298
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
+ A V++G+ +++ ++I+G+ ++ + ++A ++F +M E + +YN +I +
Sbjct: 299 VDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMT----EHDSGSYNLMIKA 354
Query: 224 YARRGDSNAAFAFFSRMTAEGFVP----------------------------DLVTWNAM 255
YA G F M V + VTWN+M
Sbjct: 355 YADEGRLEDCRRMFEMMPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSM 414
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
ISG+ Q+ + +EALKLF M I+ + T +L A G+I+ G+ +HAL+C+
Sbjct: 415 ISGYVQNDQSSEALKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPF 474
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
+ + G+AL+DMYSKCG + DAR F NVASW ++I ++G +I F R
Sbjct: 475 ESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFAR 534
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
ML+ ++ NE+T + +L A + GLV KG+ F SM E YGV + EHY C VD+L R+
Sbjct: 535 MLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSM-ESYGVVPTVEHYTCAVDLLGRAR 593
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
R+ EA + ++P+ + GA C ++ + E+ F MG + +V +SN
Sbjct: 594 RVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSN 653
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
I A G+W + +R ++ N +K+PG S +E ++
Sbjct: 654 IYAKLGKWEDVVKVRTRLRSINAKKEPGCSWIEVKD 689
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 162/384 (42%), Gaps = 76/384 (19%)
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
++AR VFD + N V A A G ++A+G + M ++ T++ L AC
Sbjct: 63 SAARGVFDGMRRRAALSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGAC 122
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
++ G QVH + G ++ VG +L+D YS C L +AR +F + + + W+
Sbjct: 123 ARGRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWS 182
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQ--FTYNAIIASYARRGDSNAAFAFFSRMT 241
M+ + + +A+ L +RM P++ F + AII+ YAR +
Sbjct: 183 PMVVALVRFNLLSDALDLLQRMP-----PSRDLFAWTAIISGYARGANEYCC-------- 229
Query: 242 AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSI 300
++L+LF +L G+ PN T VL+A G++
Sbjct: 230 -------------------------KSLELFVQLLAEDGVMPNEFTYDSVLRACVKMGAL 264
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL------------------------- 335
+ GR IH + + G + SAL+D+Y + G++
Sbjct: 265 EFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGF 324
Query: 336 ------KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
+DA+ +F + S+N MI Y G ++ +FE M R N VTL
Sbjct: 325 ISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRRMFEMM----PRRNMVTLN 380
Query: 390 SVLSACSHGGLVEKGLEIFRSMKE 413
S++S G +E+G ++F +K+
Sbjct: 381 SMMSVLLQNGKLEEGRKLFEQIKD 404
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 50/331 (15%)
Query: 17 DCLLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPN 75
D +L C+K AL G+ +H L + L S LV +Y G V+ A +V++ +
Sbjct: 252 DSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQM 311
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
P++ N ++ G ++A FS M E + ++++++KA D + +
Sbjct: 312 PSLITSNTLIAGFISMGRTEDAKLVFSQMTEH----DSGSYNLMIKA---YADEGRLEDC 364
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF-ERDVVSWTSMISGYCNVSK 194
+ M N V++ N+++ + + G L R++F + ER+ V+W SMISGY +
Sbjct: 365 RRMFEMMPRRNMVTL-NSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQ 423
Query: 195 VDEAVVLFE---RMKLE--------------------------------GLEPNQFTYNA 219
EA+ LF R+ +E E N + A
Sbjct: 424 SSEALKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTA 483
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ Y++ G + A A FS + + P++ +W ++I+G AQ+ EA+ F ML +
Sbjct: 484 LVDMYSKCGCVSDARAAFSCIMS----PNVASWTSLINGLAQNGHWMEAIVQFARMLKNN 539
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIG-REIHAL 309
+KPN +T G+L A G + G R H++
Sbjct: 540 VKPNEITFLGILMASARAGLVNKGMRFFHSM 570
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 39/248 (15%)
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
++WNA ++ A+ R +AL M S + T L A +++G ++H
Sbjct: 78 LSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQ 137
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
V + G G++L+D YS C L ARTLF+ N W+ M+ + ++ +
Sbjct: 138 VVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDA 197
Query: 370 IELFERM-----------------------------------LEEGMRANEVTLISVLSA 394
++L +RM E+G+ NE T SVL A
Sbjct: 198 LDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRA 257
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYV 451
C G +E G I + + G + + + +VD+ CRSG + +A Y+ L+ +
Sbjct: 258 CVKMGALEFGRSIHGCLIQS-GFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLIT 316
Query: 452 TNSMAGAF 459
+N++ F
Sbjct: 317 SNTLIAGF 324
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 2/179 (1%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVF 70
S + LL C + QGK VHALLC + + LV +Y+ CG V+ AR F
Sbjct: 442 SASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAF 501
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
I +PNV ++ A G++ EAI F+ M + + N+ TF +L A +
Sbjct: 502 SCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVN 561
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISG 188
KG + G V +D+ + + A + M D V W ++++
Sbjct: 562 KGMRFFHSMESYGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTA 620
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 235/419 (56%), Gaps = 39/419 (9%)
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
+ N+FT S V+KAC + +++GKQ H +MGFE+DV
Sbjct: 7 KPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDV--------------------- 45
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD 229
V T+++ Y +++A +F++M E + T+NA+I +A+ D
Sbjct: 46 ----------VVQTALVHMYARCGSLEDAGHVFDKMS----ERSTRTWNAMITGHAQNRD 91
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
A F M+ D+V+W A+I+G+AQ+ +E+L +F M +G+K + +
Sbjct: 92 MKKALKLFYEMSER----DVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGS 147
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
VL A ++++GR+ HA V + G +D+ GSAL+DMY+K GS++DA +F+ +N
Sbjct: 148 VLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRN 207
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
SWN++I +HG + ++ LFE+ML+ G++ NE++ + VLSACSH GLV +G F
Sbjct: 208 EVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFN 267
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
M + YG+ HY C++D+L R+G + EA + + +P+ S+ GA C IHG
Sbjct: 268 LMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNT 327
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+LA + E M ++ +V+LSNI AA G+W +A +RK+MK++ V KQPG+S +E
Sbjct: 328 ELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIE 386
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 178/369 (48%), Gaps = 39/369 (10%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L ++ C +L QGKQ H + + +++ LV +YA CG + A VFDK+
Sbjct: 13 LSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMS 72
Query: 75 NPNVFMLNWMVMASAFTGNFQEAI------------------------GY-------FSL 103
+ N M+ A + ++A+ GY F+
Sbjct: 73 ERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQ 132
Query: 104 MREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
MR+ + ++F VL AC L ++ G+Q HA Q GF D+ VG+AL+DMY+K G
Sbjct: 133 MRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGS 192
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
+ A +VF M +R+ VSW S+I+G + ++AV+LFE+M G++PN+ ++ ++++
Sbjct: 193 MEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSA 252
Query: 224 YARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+ G N +F+ MT G VPD+ + MI ++ +EA GM V +P
Sbjct: 253 CSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPV---EP 309
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALI-DMYSKCGSLKDARTL 341
+ +L A + G+ ++ + I + +G+ + + L+ ++Y+ G DA +
Sbjct: 310 DVSVWGALLGACRIHGNTELAKRIAEHL--LGMEVQIAGIYVLLSNIYAAAGQWDDAAKV 367
Query: 342 FEITRIKNV 350
++ + + V
Sbjct: 368 RKLMKDRGV 376
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 135/274 (49%), Gaps = 36/274 (13%)
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M+ G+KPN T++ V++A S++ G++ H + +MG DV +AL+ MY++CGS
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 335 LKDARTLFE-----ITRI--------------------------KNVASWNAMIGCYGKH 363
L+DA +F+ TR ++V SW A+I Y ++
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
G D S+ +F +M + GM+++ + SVLSAC+ +E G + F + + G +
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQ-FHAYVVQSGFALDIVV 179
Query: 424 YACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMG 483
+ +VDM +SG M +A + ++P S + GC HGR + AV + E+ + G
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMPQRNEVSW-NSIITGCAQHGRGNDAVLLFEQMLQAG 238
Query: 484 LRKPD--GFVMLSNICAADGEWHEAENLRKIMKE 515
+ KP+ FV + + C+ G +E +M +
Sbjct: 239 I-KPNEISFVGVLSACSHTGLVNEGRGYFNLMTQ 271
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 158/524 (30%), Positives = 255/524 (48%), Gaps = 64/524 (12%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
VF+ I PN+ + N M A + + A+ + M N +TF +LK+C
Sbjct: 47 VFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKA 106
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF----------------- 171
K+G+Q+H ++G + D+ V +LI MY + G L A +VF
Sbjct: 107 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKG 166
Query: 172 ----------HGMFE----RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
MF+ +DVVSW +MISGY EA+ LF+ M + P++ T
Sbjct: 167 YASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 226
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGF-----------------------------VP- 247
++++ A+ G S + GF +P
Sbjct: 227 VTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPY 286
Query: 248 -DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
D+++WN +I G+ EAL LF+ ML SG PN+VT+ +L A G+I IGR I
Sbjct: 287 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 346
Query: 307 HALVCR--MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHG 364
H + + G+ ++LIDMY+KCG ++ A +F K+++SWNAMI + HG
Sbjct: 347 HVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 406
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY 424
D+S ++F RM + G+ +++T + +LSACSH G+++ G IFRSM + Y + EHY
Sbjct: 407 RADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHY 466
Query: 425 ACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
C++D+L SG EA +++ + M + + C +HG +L + + ++
Sbjct: 467 GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEP 526
Query: 485 RKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
P +V+LSNI A G W+E N R ++ +K ++K PG S +E
Sbjct: 527 ENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIE 570
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 194/420 (46%), Gaps = 75/420 (17%)
Query: 19 LLGKCMKSKALRQGKQVHA----LLCTNDLNIFSL------------------------- 49
LL C KSKA ++G+Q+H L C DL + +
Sbjct: 97 LLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRD 156
Query: 50 ---KSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE 106
+ L+ YA G + +A+ +FD+IP +V N M+ A TGN++EA+ F M +
Sbjct: 157 VVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 216
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
R ++ T V+ AC I+ G+QVH+ GF +++ + NALID+YSKCG L +
Sbjct: 217 TNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELET 276
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS--- 223
A +F G+ +DV+SW ++I GY +++ EA++LF+ M G PN T +I+ +
Sbjct: 277 ACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 336
Query: 224 ----------------------------------YARRGDSNAAFAFFSRMTAEGFVPDL 249
YA+ GD AA F+ + + L
Sbjct: 337 LGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS----L 392
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI-HA 308
+WNAMI GFA R + + +F M +GI+P+++T G+L A +G + +GR I +
Sbjct: 393 SSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 452
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVD 367
+ + + +ID+ G K+A + ++ + W +++ HG V+
Sbjct: 453 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVE 512
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 96/225 (42%), Gaps = 8/225 (3%)
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALID---MYSKCGSLKDARTLFEITRIKNVASWNAM 356
+Q R IHA + + GLH + S LI+ + L A ++FE + N+ WN M
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
+ S+++L+ M+ G+ N T +L +C+ ++G +I + + G
Sbjct: 63 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVL-KLG 121
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
+ + ++ M ++GR+ +A+ + + P S + + R
Sbjct: 122 CDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKG----YASRGYIENAQ 177
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
+ F E+ ++ + + + A G + EA L K M + NV+
Sbjct: 178 KMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 222
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/492 (32%), Positives = 265/492 (53%), Gaps = 17/492 (3%)
Query: 41 TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGY 100
T N+ S + L G +A G++ +R +FD++P+ N+ N M+ A EA
Sbjct: 190 TQKPNVVSWVTMLSG-FARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCEIDEASRL 248
Query: 101 FSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSK 160
F M E + +++ ++ G + I K + + +M + N + A+I Y +
Sbjct: 249 FEEMPER----DSVSWTTMIN---GYVRIGKLDEARELLNEMPYRN-IGAQTAMISGYIQ 300
Query: 161 CGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAI 220
C + ARR F + DVV W +MI+GY + +++EA+ L +RM + + T+N +
Sbjct: 301 CNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRM----VNKDMVTWNTM 356
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I+ YA+ G + A F M DLV+WN++I+GF + + +ALK F M G
Sbjct: 357 ISCYAQVGQMDRAVKIFEEMGER----DLVSWNSLIAGFMLNGQNLDALKSFALMGHEGK 412
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
KP+ ++ L + ++Q+G ++H +V + G + +ALI MY+KCG + +A
Sbjct: 413 KPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGL 472
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F +V SWN++IG Y +G +++LFE M EGM +EVT I +LSAC+H G+
Sbjct: 473 VFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSACNHAGM 532
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V+ GL++F+ M + Y ++ EHYAC+VD+L R GR+ EA++++R + + T + GA
Sbjct: 533 VDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVKATAGVWGALL 592
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
C HG +L + E K +V+LSNI A W+E + +R +M + K
Sbjct: 593 GACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNIHAEANRWNEVQEVRMLMNASSTVK 652
Query: 521 QPGFSRVEKRNE 532
+PG S VE RN+
Sbjct: 653 EPGCSWVEVRNQ 664
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 191/388 (49%), Gaps = 42/388 (10%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ ++ VYA G +N+AR +FDK+P N+ N MV G F EA F +M R
Sbjct: 10 NSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVIMP----R 65
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ F++++++ +++K +++ + + V+ NA+I Y K G + A+R+
Sbjct: 66 RDLFSWTLMITCYTRNGEVEKARELFD-SLPCSYRKGVACWNAMISGYVKKGRVNEAKRL 124
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M ++++SW SM++GY K+ + F M E + ++N ++ + + GD
Sbjct: 125 FDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMD----ERDVVSWNLMVDGFIQVGDL 180
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
++A+ FF E P++V+W M+SGFA++ E+ +LF M I N ++
Sbjct: 181 DSAWKFFQ----ETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAY 236
Query: 291 LQ----------------------AGGLTGSIQIGR--EIHALVCRMGLHIDVFTGSALI 326
+Q + G ++IG+ E L+ M + ++ +A+I
Sbjct: 237 VQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMP-YRNIGAQTAMI 295
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
Y +C + +AR F+ +V WNAMI Y HG ++ ++ L +RM+ + M V
Sbjct: 296 SGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDM----V 351
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKER 414
T +++S + G +++ ++IF M ER
Sbjct: 352 TWNTMISCYAQVGQMDRAVKIFEEMGER 379
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 147/304 (48%), Gaps = 22/304 (7%)
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
E + N++I +Y+K G + +AR +F M R++VSW +M+SGY + K DEA LF
Sbjct: 3 EKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVI 62
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M L F++ +I Y R G+ A F + + + WNAMISG+ + R
Sbjct: 63 MPRRDL----FSWTLMITCYTRNGEVEKARELFDSLPC-SYRKGVACWNAMISGYVKKGR 117
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
NEA +LF M V + N + G Q + ++ E+ DV + +
Sbjct: 118 VNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMD--------ERDVVSWNL 169
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
++D + + G L A F+ T+ NV SW M+ + ++G + S LF++M N
Sbjct: 170 MVDGFIQVGDLDSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSR----N 225
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
V+ +++SA +++ +F M ER V + +++ R G++ EA +LL
Sbjct: 226 IVSWNAMISAYVQRCEIDEASRLFEEMPERDSVS-----WTTMINGYVRIGKLDEARELL 280
Query: 445 RQVP 448
++P
Sbjct: 281 NEMP 284
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 292/560 (52%), Gaps = 43/560 (7%)
Query: 20 LGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C S + G ++HA +L +N + + + LV ++ G ++ A +FD++ +
Sbjct: 119 LQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKD- 177
Query: 79 FMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ W M + FT N + EA+ +F +++ + ++ + +L A L + GK++H
Sbjct: 178 -NITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIH 236
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A A + ++++ +GN LIDMYSKC + A VF M +D++SWT++I+ Y +
Sbjct: 237 AYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHT 296
Query: 197 EAVVLFERMKLEGLEPNQFTY----------------------------------NAIIA 222
EA+ L +++ +G++ + N II
Sbjct: 297 EALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQNMIID 356
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA G+ N A F + + D+V+W +MIS + + NEAL +F M + ++P
Sbjct: 357 VYADCGNINYATRMFESIKCK----DVVSWTSMISCYVHNGLANEALGVFYLMKETSVEP 412
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+++T+ +L A ++ G+EIH + R G ++ T ++L+DMY+ CGSL++A +F
Sbjct: 413 DSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVF 472
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
TR K++ W MI YG HG +++ELF M ++ + + +T +++L ACSH GL+
Sbjct: 473 ICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLIN 532
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G + +MK +Y ++ EHYAC+VD+L R+ + EAY ++ + + T + AF
Sbjct: 533 EGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGA 592
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IH + L ++ ++ P +V++SN+ AA G W + E +R MK ++K P
Sbjct: 593 CRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNP 652
Query: 523 GFSRVEKRNEFVEKEVQNES 542
G S +E N+ V+++S
Sbjct: 653 GCSWIEVGNKVHTFLVRDKS 672
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 152/546 (27%), Positives = 257/546 (47%), Gaps = 52/546 (9%)
Query: 18 CLLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C+L C + + +G ++H L+ C D +F S LV +YA C D+ AR +FD++
Sbjct: 15 CVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANS-LVSMYAKCNDILGARKLFDRMNE 73
Query: 76 PN-VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N V N ++ A + G EA+G F M++ N +T L+AC K G +
Sbjct: 74 RNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGME 133
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+HA + DV V NAL+ M+ + G + A R+F + E+D ++W SMI+G+
Sbjct: 134 IHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGL 193
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRG-----------------DS-----NA 232
+EA+ F ++ L+P++ + +I+A+ R G DS N
Sbjct: 194 YNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNT 253
Query: 233 AFAFFSRMTAEGFV---------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+S+ + DL++W +I+ +AQ+ EALKL + + G+ +
Sbjct: 254 LIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVD 313
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+ + L A + +E+H + GL D+ + +ID+Y+ CG++ A +FE
Sbjct: 314 TMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFE 372
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ K+V SW +MI CY +G+ + ++ +F M E + + +TL+S+LSA + + K
Sbjct: 373 SIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNK 432
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL---RQVPMYVTNSMAGAFR 460
G EI R G + +VDM G + AY + R + + +M A+
Sbjct: 433 GKEI-HGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAY- 490
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRK--PD--GFVMLSNICAADGEWHEAENLRKIMKEK 516
+HGR AV E F M +K PD F+ L C+ G +E + L + MK K
Sbjct: 491 ---GMHGRGKAAV---ELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCK 544
Query: 517 NVQKQP 522
Q +P
Sbjct: 545 -YQLEP 549
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 174/346 (50%), Gaps = 47/346 (13%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+ FTF VLKAC + DI +G ++H + + G+++ V V N+L+ MY+KC + AR++F
Sbjct: 9 DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLF 68
Query: 172 HGMFER-DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------- 217
M ER DVVSW S+IS Y + EA+ LF M+ G+ N +T
Sbjct: 69 DRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFK 128
Query: 218 ----------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
NA++A + R G + A F + + D +TWN+M
Sbjct: 129 KLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEK----DNITWNSM 184
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
I+GF Q+ NEAL+ F G+ + +KP+ V++ +L A G G + G+EIHA + L
Sbjct: 185 IAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWL 244
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER 375
++ G+ LIDMYSKC + A +F+ K++ SW +I Y ++ +++L +
Sbjct: 245 DSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRK 304
Query: 376 MLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
+ +GM + + + S L ACS GL KE +G + +
Sbjct: 305 VQTKGMDVDTMMIGSTLLACS-------GLRCLSHAKEVHGYTLKR 343
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 98/193 (50%), Gaps = 6/193 (3%)
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M V G+ ++ T VL+A G+ I G EIH L+ + G VF ++L+ MY+KC
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 335 LKDARTLFEITRIKN-VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLS 393
+ AR LF+ +N V SWN++I Y +G ++ LF M + G+ AN TL++ L
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 394 ACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMY 450
AC + G+EI ++ + V + +V M R G+M A +D L +
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQV-LDVYVANALVAMHVRFGKMSYAARIFDELDEKDNI 179
Query: 451 VTNSM-AGAFRNG 462
NSM AG +NG
Sbjct: 180 TWNSMIAGFTQNG 192
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 261/509 (51%), Gaps = 56/509 (11%)
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
+A VFDK+ NV M+ G +EAI +F M + +KFT S V AC
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC---GLLCSARRVFHGMFERDVVS 181
L ++ G+Q+H+ A + G +DV +L+DMY+KC G + R+VF M + V+S
Sbjct: 281 ELENLSLGRQLHSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRKVFDRMQDHSVMS 338
Query: 182 WTSMISGY---CNVSKVDEAVVLFERMKLEG-LEPNQFTYNA----------------II 221
WT++I+GY CN++ EA+ LF M +G +EPN FT+++ ++
Sbjct: 339 WTALITGYMQNCNLAT--EAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVL 396
Query: 222 ASYARRG----------------------DSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
+RG D+ AF S +LV++N + G
Sbjct: 397 GHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSE-------KNLVSYNTFLDGT 449
Query: 260 AQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
++ A +L + + + T +L GS++ G +IH+ V ++GL +
Sbjct: 450 CRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQ 509
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
+ALI MYSKCGS+ A +F + +NV SW +MI + KHG + +E F +M +E
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKE 569
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
G++ NEVT +++LSACSH GLV +G F SM E + +K EHYAC+VD+LCR+G + +
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Query: 440 AYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
A++ + +P + F C +H +L + E +P ++ LSNI A+
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYAS 689
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
G+W E+ +R+ MKE+N+ K+ G S +E
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIE 718
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 165/351 (47%), Gaps = 54/351 (15%)
Query: 92 GNFQEAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
G+ + A+ LM R+ I + TFS +LK+C+ + GK VHA + E D +
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVL 99
Query: 151 GNALIDMYSKCGLLCSARRVFHGM---FERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
N+LI +YSK G L A+ VF M +RDVVSW++M++ + N + +A+ LF
Sbjct: 100 YNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLE 159
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSR------MTAEGFVPD------------- 248
GL PN + Y A+I R SN+ F R M F D
Sbjct: 160 MGLVPNDYCYTAVI-----RACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVK 214
Query: 249 -------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+VTW MI+ Q EA++ F M++SG + + T++
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC---GSLKDARTLFEITR 346
V A ++ +GR++H+ R GL DV +L+DMY+KC GS+ D R +F+ +
Sbjct: 275 VFSACAELENLSLGRQLHSWAIRSGLADDV--ECSLVDMYAKCSADGSVDDCRKVFDRMQ 332
Query: 347 IKNVASWNAMIGCYGKH-GMVDSSIELFERMLEEG-MRANEVTLISVLSAC 395
+V SW A+I Y ++ + +I LF M+ +G + N T S AC
Sbjct: 333 DHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 231/476 (48%), Gaps = 44/476 (9%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDV 63
I P+++++ LL C++++ R GK VHA L ++ S L + L+ +Y+ GD+
Sbjct: 57 IRPMDSVT---FSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDL 113
Query: 64 NSARLVFDKIPN-PNVFMLNWMVMASAFTGNFQE--AIGYFSLMREFIYRCNKFTFSIVL 120
A+ VF+ + +++W M + F N +E AI F E N + ++ V+
Sbjct: 114 TKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVI 173
Query: 121 KACVGLLDIKKGKQVHAVATQMG-FENDVSVGNALIDMYSKC-GLLCSARRVFHGMFERD 178
+AC + G+ + + G FE+DV VG +LIDM+ K +A +VF M E +
Sbjct: 174 RACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN 233
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA------------- 225
VV+WT MI+ + EA+ F M L G E ++FT +++ ++ A
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHS 293
Query: 226 ---RRGDSN----AAFAFFSRMTAEGFVPD------------LVTWNAMISGFAQS-KRE 265
R G ++ + +++ +A+G V D +++W A+I+G+ Q+
Sbjct: 294 WAIRSGLADDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLA 353
Query: 266 NEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
EA+ LF M+ G ++PN+ T + +A G ++G+++ + GL + ++
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNS 413
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
+I M+ KC ++DART FE KN+ S+N + ++ + + EL + E + +
Sbjct: 414 VISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVS 473
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
T S+LS ++ G + KG +I S + G+ ++ ++ M + G + A
Sbjct: 474 AFTFASLLSGVANVGSLRKGEQI-HSQVLKLGLSCNQPVCNALISMYSKCGSIDTA 528
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 193/447 (43%), Gaps = 52/447 (11%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGC---GDVNSARLVFDK 72
L + C + + L G+Q+H+ + L ++ LV +YA C G V+ R VFD+
Sbjct: 272 LSSVFSACAELENLSLGRQLHSWAIRSGLAD-DVECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR----CNKFTFSIVLKACVGLLD 128
+ + +V ++W + + + N A +L E I + N FTFS KAC + D
Sbjct: 331 MQDHSV--MSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSD 388
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
+ GKQV A + G ++ SV N++I M+ KC + AR F + E+++VS+ + + G
Sbjct: 389 PRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDG 448
Query: 189 YC-----------------------------------NVSKVDEAVVLFERMKLEGLEPN 213
C NV + + + ++ GL N
Sbjct: 449 TCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCN 508
Query: 214 QFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
Q NA+I+ Y++ G + A FS M ++++W +MI+GFA+ L+ F
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFSLMDNR----NVISWTSMITGFAKHGFAERVLETFN 564
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKC 332
M G+KPN VT +L A G + G R +++ + + + ++D+ +
Sbjct: 565 QMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624
Query: 333 GSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
G L DA + +V W +G H + +L R + E I +
Sbjct: 625 GLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELG-KLAARKILEFDPNEPAAYIQL 683
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVK 418
+ + G E+ E+ R MKER VK
Sbjct: 684 SNIYASAGKWEESTEMRRKMKERNLVK 710
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/493 (33%), Positives = 258/493 (52%), Gaps = 53/493 (10%)
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFT-FSIVLKACVGLLDIKKG 132
P+PN+ L +G +EA+ L + R KF + +L CV I++G
Sbjct: 61 PSPNLKTL-------CSSGQLKEAL----LQMAILGREVKFEGYDTILNECVSQRAIREG 109
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
++VH + + V + LI +Y+KC L AR +F M +++VVSWT+MIS Y
Sbjct: 110 QRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQR 169
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIAS----------------------------- 223
EA+ LF M EPN FT+ I+ S
Sbjct: 170 GFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVG 229
Query: 224 ------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
YA+ G A F + D+V A+ISG+AQ + EALKLF+ + +
Sbjct: 230 SSLLDMYAKSGRICDAHGVFHCLPER----DVVACTAIISGYAQMGLDEEALKLFRQLQI 285
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G+ N+VT VL A ++ G+++H+ V R G + V ++LIDMYSKCG++
Sbjct: 286 EGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCY 345
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACS 396
AR +F+ + SWNAM+ Y KHGM +ELF+ M EE ++ + +T ++VLS CS
Sbjct: 346 ARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCS 405
Query: 397 HGGLVEKGLEIFRSM-KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
HG L + GLEIF +M + G++ HY CVVD+L R+GR+ EA+D ++++P T ++
Sbjct: 406 HGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAI 465
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
G+ C +H ++ + +G++ E+ +V+LSN+ A+ G+W + N+R +M+E
Sbjct: 466 WGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQE 525
Query: 516 KNVQKQPGFSRVE 528
K V K+PG S VE
Sbjct: 526 KAVTKEPGRSWVE 538
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 219/422 (51%), Gaps = 51/422 (12%)
Query: 17 DCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
D +L +C+ +A+R+G++VH ++ T L L+++L+ +Y C + AR +FD++P
Sbjct: 94 DTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQ 153
Query: 76 PNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
NV ++W M SA++ G EA+ F M N FTF+ +L +C G L + G+
Sbjct: 154 KNV--VSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGR 211
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H++A + +E+ + VG++L+DMY+K G +C A VFH + ERDVV+ T++ISGY +
Sbjct: 212 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMG 271
Query: 194 KVDEAVVLFERMKLEGLEPNQFTY-----------------------------------N 218
+EA+ LF ++++EG+ N TY N
Sbjct: 272 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLN 331
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
++I Y++ G+ A F M ++WNAM+ G+++ E L+LFK M
Sbjct: 332 SLIDMYSKCGNVCYARRIFDSMPER----TCISWNAMLVGYSKHGMAREVLELFKLMREE 387
Query: 279 G-IKPNNVTVTGVLQAGGLTGSIQ-IGREI--HALVCRMGLHIDVFTGSALIDMYSKCGS 334
+KP+++T VL +G G ++ +G EI + + + G+ D+ ++D+ + G
Sbjct: 388 NKVKPDSITYLAVL-SGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGR 446
Query: 335 LKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVL 392
+++A ++ + A W +++G H V+ I + +++LE E A ++S L
Sbjct: 447 VEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNL 506
Query: 393 SA 394
A
Sbjct: 507 YA 508
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 159/343 (46%), Gaps = 20/343 (5%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C S G+Q+H++ + ++F + S L+ +YA G + A VF +P
Sbjct: 197 ILTSCYGSLGFETGRQIHSIAIKRNYESHMF-VGSSLLDMYAKSGRICDAHGVFHCLPER 255
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V ++ A G +EA+ F ++ N T++ VL A GL + GKQVH
Sbjct: 256 DVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVH 315
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ + G + V + N+LIDMYSKCG +C ARR+F M ER +SW +M+ GY
Sbjct: 316 SHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAR 375
Query: 197 EAVVLFERMKLEG-LEPNQFTYNAIIASYARRGDSNAAFAFFSRMT--AEGFVPDLVTWN 253
E + LF+ M+ E ++P+ TY A+++ + + F M +G PD+ +
Sbjct: 376 EVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYG 435
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR--EIHALVC 311
++ ++ R EA K M V G L GS ++ EI +V
Sbjct: 436 CVVDLLGRAGRVEEAFDFIKKMPF---------VPTAAIWGSLLGSCRVHSDVEIGIIVG 486
Query: 312 RMGLHIDVFTGS---ALIDMYSKCGSLKDARTLFEITRIKNVA 351
+ L ++ L ++Y+ G +D R + ++ + K V
Sbjct: 487 QKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVT 529
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/529 (30%), Positives = 260/529 (49%), Gaps = 73/529 (13%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
VF+ PN+ + N M+ A + + + + M + N +TF +LK+C
Sbjct: 39 VFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKT 98
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL-----------------C------ 165
++G+Q+HA ++G E D +LI MY++ G L C
Sbjct: 99 FEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITG 158
Query: 166 --------SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
SAR+VF + ERDVVSW +MI+GY +EA+ LF+ M + P++ T
Sbjct: 159 YASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTL 218
Query: 218 ------------------------------------NAIIASYARRGDSNAAFAFFSRMT 241
NA I Y++ GD A F ++
Sbjct: 219 VSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLS 278
Query: 242 AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
+ D+V+WN +I G+ EAL LF+ ML SG PN+VT+ VL A G+I
Sbjct: 279 CK----DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAID 334
Query: 302 IGREIHALVCR--MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
IGR IH + + G+ ++LIDMY+KCG ++ A +F K+++SWNAMI
Sbjct: 335 IGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFG 394
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
+ HG +++ +LF RM + G+ +++TL+ +LSACSH GL++ G IF+S+ + Y +
Sbjct: 395 FAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITP 454
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEF 479
EHY C++D+L +G EA +++ +PM + + C +HG +LA + ++
Sbjct: 455 KLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKL 514
Query: 480 FEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
E+ +V+LSNI A G W + +R+++ K ++K PG S +E
Sbjct: 515 MEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIE 563
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 190/432 (43%), Gaps = 76/432 (17%)
Query: 19 LLGKCMKSKALRQGKQVHA----LLCTNDL--------------------NIFSLKSK-- 52
LL C KSK +G+Q+HA L C D +F S+
Sbjct: 89 LLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRD 148
Query: 53 ------LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE 106
L+ YA GDV SAR VFD I +V N M+ ++EA+ F M
Sbjct: 149 VVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMR 208
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHA-VATQMGFENDVSVGNALIDMYSKCGLLC 165
R ++ T VL AC I+ G+++H V GF + + + NA I +YSKCG +
Sbjct: 209 TNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVE 268
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------- 217
A +F G+ +DVVSW ++I GY +++ EA++LF+ M G PN T
Sbjct: 269 IASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 328
Query: 218 -----------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
++I YA+ GD AA F+ M +
Sbjct: 329 HLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKS---- 384
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
L +WNAMI GFA R N A LF M +GI+P+++T+ G+L A +G + +GR I
Sbjct: 385 LSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFK 444
Query: 309 LVCR-MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMV 366
V + + + +ID+ G K+A + + ++ + W +++ HG +
Sbjct: 445 SVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNL 504
Query: 367 DSSIELFERMLE 378
+ + ++++E
Sbjct: 505 ELAESFAQKLME 516
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 307 HALVCRMGLHIDVFTGSALIDM---YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
HA + + GLH + S L+++ L A ++FE + N+ WN M+
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
+ S +E++ RM+ G N T +L +C+ E+G +I + + G ++ +
Sbjct: 62 SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVM-KLGCELDRYA 120
Query: 424 YACVVDMLCRSGRMVEA 440
+ ++ M R+GR+ +A
Sbjct: 121 HTSLISMYARNGRLEDA 137
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/518 (30%), Positives = 270/518 (52%), Gaps = 47/518 (9%)
Query: 29 LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
+RQ KQ+H N ++ L KL+ + +++ A V P P +F+ N ++ A
Sbjct: 1 MRQVKQIHGYTLRNGIDQTKILIEKLLEI----PNLHYAHKVLHHSPKPTLFLYNKLIQA 56
Query: 88 -SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
S+ + + +S M + N+ TF+ + AC L G+ +H + GFE
Sbjct: 57 YSSHPQHQHQCFSLYSQMLLHSFLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGFEP 116
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
D+ AL+DM Y V ++ A LF++M
Sbjct: 117 DLFAATALLDM-------------------------------YTKVGTLELARKLFDQMP 145
Query: 207 LEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKREN 266
+ G+ T+NA++A +AR GD + A F M + ++V+W MISG+++SK+
Sbjct: 146 VRGVP----TWNAMMAGHARFGDMDVALELFRLMPSR----NVVSWTTMISGYSRSKKYG 197
Query: 267 EALKLFKGM-LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EAL LF M G+ PN VT+ + A G+++IG+ + A + G +++ +A+
Sbjct: 198 EALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEIGQRVEAYARKNGFFKNLYVSNAV 257
Query: 326 IDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
++MY+KCG + A +F EI ++N+ SWN+MI HG +++L+++ML EG +
Sbjct: 258 LEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLAVHGECCKTLKLYDQMLGEGTSPD 317
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
+VT + +L AC+HGG+VEKG IF+SM + + EHY C+VD+L R+G++ EAY+++
Sbjct: 318 DVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPKLEHYGCMVDLLGRAGQLREAYEVI 377
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+++PM + + GA C+ H +LA E F + P +V+LSNI A+ G+W
Sbjct: 378 QRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFALEPWNPGNYVILSNIYASAGQWD 437
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
LRK+MK + K G S +E+ + + V++ S
Sbjct: 438 GVAKLRKVMKGSKITKSAGHSFIEEGGQLHKFIVEDRS 475
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/524 (30%), Positives = 256/524 (48%), Gaps = 64/524 (12%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
VF+ I PN+ + N M A + + A+ + M N +TF +LK+C L
Sbjct: 19 VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMY------------------------------ 158
K+G Q+H ++G+E D+ V +LI MY
Sbjct: 79 SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG 138
Query: 159 -SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
+ G + SAR +F + +DVVSW +MISGY EA+ LF+ M + P++ T
Sbjct: 139 YASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTM 198
Query: 218 NAIIASYARRGD----------------------SNAAFAFFSRM----TAEGFV----- 246
+I++ AR G NA F+S+ TA G
Sbjct: 199 VTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSY 258
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
D+++WN +I G+ EAL LF+ ML SG PN+VT+ +L A G+I IGR I
Sbjct: 259 KDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWI 318
Query: 307 HALVCR--MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHG 364
H + + G+ ++LIDMYSKCG ++ A +F K++ +WNAMI + HG
Sbjct: 319 HVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHG 378
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY 424
+++ ++F RM + ++ +++T + +LSACSH G+++ G IFRSM Y + EHY
Sbjct: 379 RANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHY 438
Query: 425 ACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGL 484
C++D+L SG EA +++ + M + + C +HG +L + F++
Sbjct: 439 GCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEP 498
Query: 485 RKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
P +V+LSNI A G W+E +R ++ +K ++K PG S +E
Sbjct: 499 NNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIE 542
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 166/356 (46%), Gaps = 43/356 (12%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ LV YA G + SAR +FD+IP +V N M+ TGN++EA+ F M + R
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
++ T V+ A I+ G+QVH+ GF +++ + NALID YSKCG + +A +
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY------------- 217
F G+ +DV+SW +I GY +++ EA++LF+ M G PN T
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312
Query: 218 ------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
++I Y++ GD AA F+ M + L WN
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKS----LPAWN 368
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI-HALVCR 312
AMI GFA R N A +F M + IKP+++T G+L A G + +GR I ++
Sbjct: 369 AMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHN 428
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFE-ITRIKNVASWNAMIGCYGKHGMVD 367
+ + +ID+ G K+A + +T + W +++ HG V+
Sbjct: 429 YKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVE 484
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 16/223 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALL---CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+L C A+ G+ +H + N SL++ L+ +Y+ CGD+ +A VF+ + +
Sbjct: 302 ILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLH 361
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGK 133
++ N M+ A G A FS MR+ + + TF +L AC G+LD+ G+
Sbjct: 362 KSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDL--GR 419
Query: 134 QVHAVATQ-MGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCN 191
+ T + +ID+ GL A + M E D V W S++
Sbjct: 420 HIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKA--- 476
Query: 192 VSKVDEAVVLFERM--KLEGLEPNQFTYNAIIAS-YARRGDSN 231
K+ V L E+ L +EPN ++++ YA G N
Sbjct: 477 -CKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWN 518
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/511 (31%), Positives = 263/511 (51%), Gaps = 37/511 (7%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF-IY 109
S L +Y + AR VFD +P+P+ + W + + G+ EA+ F M +
Sbjct: 153 SALAKLYFKLSRGDDARKVFDTVPSPDTIL--WNTLLAGLPGS--EALEAFVRMVDAGRV 208
Query: 110 RCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARR 169
R + T + L+A + G+ VH + G V L+ +YSKCG + SA+
Sbjct: 209 RPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQF 268
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD 229
+F M D+V++ ++ISGY V+ +V LF+ + G PN T A+I Y+ G
Sbjct: 269 LFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGH 328
Query: 230 SN-----AAFAFFSRMTAEGFVPDLVT--------------------------WNAMISG 258
AF +R+ A+ V +T WNAMISG
Sbjct: 329 ELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISG 388
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
+AQ+ A+ LF+ M ++PN +T++ L A G++ +G+ +H ++ + L ++
Sbjct: 389 YAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELN 448
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
V+ +ALIDMY+KCGS+ +AR++F+ KNV SWNAMI YG HG +++L++ ML+
Sbjct: 449 VYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLD 508
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
+ T +SV+ ACSHGGLV++G ++FR M Y + EH C+VD+L R+G++
Sbjct: 509 ARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLN 568
Query: 439 EAYDLLRQVPM-YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNIC 497
EA +L+ + P + + GA C +H DLA ++ FE+ +V+LSN+
Sbjct: 569 EALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLY 628
Query: 498 AADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ + EA +R+ K + + K PG + +E
Sbjct: 629 TSKKHYSEAAVVRQEAKTRKLVKTPGCTLIE 659
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 196/424 (46%), Gaps = 49/424 (11%)
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
D + +H ++ G+ D V +AL +Y K AR+VF + D + W ++++
Sbjct: 129 DAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLA 188
Query: 188 GYCN-------VSKVDEAVVLFERMKLE-------------------------GLEPNQF 215
G V VD V + L GL ++
Sbjct: 189 GLPGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEH 248
Query: 216 TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
+++ Y++ GD ++A F RM PDLV +NA+ISG++ + +++LFK +
Sbjct: 249 VVTGLMSLYSKCGDMDSAQFLFDRMDN----PDLVAYNALISGYSVNGMVESSVELFKEL 304
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
SG +PN+ T+ V+ G + R +HA V + L D +AL +Y + +
Sbjct: 305 TASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDM 364
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ AR++F+ K + SWNAMI Y ++G+ + ++ LF+ M E ++ N +T+ S LSAC
Sbjct: 365 ESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSAC 424
Query: 396 SHGGLVEKGLEIFRSM-KERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYV 451
+H G + G + R + KE+ + + ++DM + G + EA +D + +
Sbjct: 425 AHLGALSLGKWVHRIISKEKLELNVYV--MTALIDMYAKCGSIAEARSIFDRMDNKNVVS 482
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENL 509
N+M +G +HG+ A+ + ++ + + P LS I C+ G E + +
Sbjct: 483 WNAMI----SGYGLHGQGAEALKLYKDMLDARIL-PTSSTFLSVIYACSHGGLVDEGQKV 537
Query: 510 RKIM 513
++M
Sbjct: 538 FRVM 541
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 125/265 (47%), Gaps = 11/265 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL +C+ + ++ AL+ T L +Y D+ SAR +FD + +
Sbjct: 330 LLARCLHAFVVKARLDADALVST----------ALTTLYCRLNDMESARSIFDAMLEKTM 379
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
N M+ A G + A+ F LM+E + N T S L AC L + GK VH +
Sbjct: 380 ESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRI 439
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
++ E +V V ALIDMY+KCG + AR +F M ++VVSW +MISGY + EA
Sbjct: 440 ISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEA 499
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMIS 257
+ L++ M + P T+ ++I + + G + F MT E P + M+
Sbjct: 500 LKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVD 559
Query: 258 GFAQSKRENEALKLFKGMLVSGIKP 282
++ + NEAL+L S I P
Sbjct: 560 LLGRAGKLNEALELISEFPQSAIGP 584
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 259/495 (52%), Gaps = 39/495 (7%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ ++ Y D+N AR VF+ + N M+ G FQEA+ MR +
Sbjct: 227 TTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQ 286
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ T++ ++ AC + + GKQ+HA + N L +S C + +A
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQMHAYILK----------NELNPNHSFCLSVSNA--- 333
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
+I+ YC +KVDEA +F M + N T+NAI++ Y G
Sbjct: 334 --------------LITLYCKNNKVDEARKIFYAMPVR----NIITWNAILSGYVNAGRM 375
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
A +FF M V +L+T MISG AQ+ +E LKLFK M + G +P + G
Sbjct: 376 EEAKSFFEEMP----VKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGA 431
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A + G+++ GR++HA + +G + G+A+I MY+KCG ++ A ++F ++
Sbjct: 432 LTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDL 491
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SWN+MI G+HG +IELF++ML+EG+ + +T ++VL+ACSH GLVEKG F S
Sbjct: 492 VSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNS 551
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M E YG+ ++HYA +VD+ CR+G A ++ +P + A GC IHG D
Sbjct: 552 MLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMD 611
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
L + E+ F++ + +V+LSNI A G W++ +RK+M+++ V+K+P S +E
Sbjct: 612 LGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVE 671
Query: 531 NE----FVEKEVQNE 541
N+ V+ +V E
Sbjct: 672 NKVHVFMVDDDVHPE 686
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 163/369 (44%), Gaps = 41/369 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLN-----IFSLKSKLVGVYAGCGDVNSARLV---- 69
++ C + + GKQ+HA + N+LN S+ + L+ +Y V+ AR +
Sbjct: 295 IISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAM 354
Query: 70 ---------------------------FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS 102
F+++P N+ L M+ A G E + F
Sbjct: 355 PVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFK 414
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
MR + F F+ L AC L ++ G+Q+HA +G+E+ +SVGNA+I MY+KCG
Sbjct: 415 QMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCG 474
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
++ +A VF M D+VSW SMI+ +A+ LF++M EG+ P++ T+ ++
Sbjct: 475 VVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLT 534
Query: 223 SYARRGDSNAAFAFFSRM-TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ + G +F+ M + G P + M+ F ++ + A + M K
Sbjct: 535 ACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSM---PSK 591
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P +L + G++ +G E + ++ D T L ++Y+ G D +
Sbjct: 592 PGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDG-TYVLLSNIYADVGRWNDVAKV 650
Query: 342 FEITRIKNV 350
++ R + V
Sbjct: 651 RKLMRDQAV 659
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 157/331 (47%), Gaps = 19/331 (5%)
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
+ VHA GF+ N L++MY K + AR++F + D ++ T++I+ YC
Sbjct: 32 ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCA 91
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT 251
+ ++ +F L + YNA+I YA GD ++A F M + F PD T
Sbjct: 92 LGNLELGREIFNGTPL--YMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFT 149
Query: 252 WNAMISGFAQ-SKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
+ +++S E + ++ ++ +G+ + +V L + + + ++G A+V
Sbjct: 150 FTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMV 209
Query: 311 CRMGL-----HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV-ASWNAMIGCYGKHG 364
L D T + +I Y + L AR +FE ++N+ A+WNAMI Y G
Sbjct: 210 SARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFE-AMVENLGAAWNAMISGYVHCG 268
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY 424
++ L +M G++ +++T +++SAC++ G + G ++ + + +++ H
Sbjct: 269 CFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKN---ELNPNHS 325
Query: 425 AC------VVDMLCRSGRMVEAYDLLRQVPM 449
C ++ + C++ ++ EA + +P+
Sbjct: 326 FCLSVSNALITLYCKNNKVDEARKIFYAMPV 356
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 169/603 (28%), Positives = 285/603 (47%), Gaps = 86/603 (14%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK------LVGVYAGCGDVNSA 66
+ + D + M S +G+ AL C +D+ + +K ++ YA G A
Sbjct: 251 IEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEA 310
Query: 67 RLVFDKIP-----NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLK 121
F ++ PNV ++ S G EA+ F M + N T + +
Sbjct: 311 SKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVS 370
Query: 122 ACVGLLDIKKGKQVHAVATQMG-FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
AC L ++ G+++H ++ ++D+ VGN+L+D Y+KC + ARR F + + D+V
Sbjct: 371 ACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLV 430
Query: 181 SWTSMISGYCNVSKVDEAVVL-----------------------------------FERM 205
SW +M++GY +EA+ L F+RM
Sbjct: 431 SWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM 490
Query: 206 KLEGLEPNQFTYN-----------------------------------AIIASYARRGDS 230
G++PN T + A+I+ Y+
Sbjct: 491 HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSL 550
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
A + FS ++ D+V WN++IS AQS R AL L + M +S ++ N VT+
Sbjct: 551 EVACSVFSELSTR----DVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSA 606
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A +++ G+EIH + R GL F ++LIDMY +CGS++ +R +F++ +++
Sbjct: 607 LPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDL 666
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SWN MI YG HG ++ LF++ G++ N +T ++LSACSH GL+E+G + F+
Sbjct: 667 VSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKM 726
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
MK Y + + E YAC+VD+L R+G+ E + + ++P ++ G+ C IH D
Sbjct: 727 MKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPD 786
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
LA FE+ + +V+++NI +A G W +A +R +MKE+ V K PG S +E +
Sbjct: 787 LAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVK 846
Query: 531 NEF 533
+
Sbjct: 847 RKL 849
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 160/511 (31%), Positives = 264/511 (51%), Gaps = 18/511 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L KC K LR G QVHA L N +++ L S+L+ VY G V AR +FDK+ N
Sbjct: 95 ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154
Query: 78 VFMLNWMVMASAFTG--NFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
VF +W + + G +++E I F LM R + F F V KAC L + + GK V
Sbjct: 155 VF--SWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
+ +GFE + V +++DM+ KCG + ARR F + +DV W M+SGY + +
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA-EGFVPDLVTWNA 254
+A+ MKL G++P+Q T+NAII+ YA+ G A +F M + F P++V+W A
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTA 332
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM- 313
+I+G Q+ + EAL +F+ M++ G+KPN++T+ + A ++ GREIH ++
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 392
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
L D+ G++L+D Y+KC S++ AR F + + ++ SWNAM+ Y G + +IEL
Sbjct: 393 ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELL 452
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK----ERYGVKISKEHYACVVD 429
M +G+ + +T +++ + G + LE F+ M + IS AC
Sbjct: 453 SEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQV 512
Query: 430 MLCRSGRMVEAYDLLRQVPMYV-TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
+ G+ + Y L + + S + +GC+ ++A ++ F E+ R
Sbjct: 513 RNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCD---SLEVACSV---FSELSTRDVV 566
Query: 489 GFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ + + CA G A +L + M NV+
Sbjct: 567 VWNSIISACAQSGRSVNALDLLREMNLSNVE 597
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 151/297 (50%), Gaps = 9/297 (3%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
++ +L+ C L +++ G QVHA G + +G+ L+++Y + G + ARR+F M
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
ER+V SWT+++ YC + +E + LF M EG+ P+ F + + + + +
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
+ M + GF + +++ F + R + A + F+ + + N+ V+G G
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRIK----NV 350
+++ ++ G+ D T +A+I Y++ G ++A F E+ +K NV
Sbjct: 272 FKKALKCISDMKL----SGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNV 327
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
SW A+I ++G ++ +F +M+ EG++ N +T+ S +SAC++ L+ G EI
Sbjct: 328 VSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 384
>gi|297833170|ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330307|gb|EFH60726.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 275/528 (52%), Gaps = 49/528 (9%)
Query: 26 SKALRQGKQVHA-LLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
S L + KQ+H ++ + L++ + L + LV Y G + A VF +P P+V N
Sbjct: 142 SSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGSLGFAEKVFAIMPQPDVSSFNV 201
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
M++ A G EA+ + M +++T +L C L DI+ GK VH + G
Sbjct: 202 MIVGYAKQGFGLEALELYYKMVSDGIEPDEYTLLGLLVCCGHLSDIRLGKGVHGWIERRG 261
Query: 144 --FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
+ +++ + NAL+DMY KC A+R F + ++D+ SW +M+ G+
Sbjct: 262 PVYSSNLILRNALLDMYFKCKESGLAKRAFDALKKKDMRSWNTMVVGF------------ 309
Query: 202 FERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQ 261
R GD AA A F +M DLV+WN+++ +++
Sbjct: 310 -----------------------VRLGDMEAAQAVFDQMPQR----DLVSWNSLLFCYSK 342
Query: 262 SKRENEALK--LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDV 319
+ A++ ++ ++V +KP+ VT+ ++ G + GR +H L+ R+ L D
Sbjct: 343 KGCDQRAVRELFYEMLIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLMIRLQLEGDA 402
Query: 320 FTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE 379
F SALIDMY KCG ++ A +F+ K+V W +MI + HG +++LF+RM EE
Sbjct: 403 FLSSALIDMYCKCGLIERAFMVFKTATEKDVPLWTSMITGFAFHGYGQQALQLFKRMQEE 462
Query: 380 GMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVE 439
+ N+VTL++VL+ACSH GLVE+GL +F MKE++G EHY +VD+LCR+GR+ E
Sbjct: 463 DVTPNKVTLLAVLTACSHSGLVEEGLHVFYHMKEKFGFHPETEHYGSLVDLLCRAGRLEE 522
Query: 440 AYDLLR-QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
A D+++ ++PM + SM G+ + C + A E ++ K G+V+LSNI A
Sbjct: 523 AKDIVQNKMPMRPSQSMWGSILSACREGEDIETAELALSELLKLEPEKEGGYVLLSNIYA 582
Query: 499 ADGEWHEAENLRKIMKEKNVQKQPGFSR---VEKRNEFVEKEVQNESK 543
G W ++ R+ M+ + V+K G+S VE + FV E QN +
Sbjct: 583 TVGRWGYSDKTREAMESRGVKKTAGYSSVVGVEGVHSFVAAEKQNHPR 630
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 171/385 (44%), Gaps = 26/385 (6%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSA 66
P+ + ++ + LL K K K+ L D+ S + +VG + GD+ +A
Sbjct: 262 PVYSSNLILRNALLDMYFKCKESGLAKRAFDALKKKDMR--SWNTMVVG-FVRLGDMEAA 318
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIY--------RCNKFTFSI 118
+ VFD++P ++ N ++ + G Q A+ RE Y + ++ T
Sbjct: 319 QAVFDQMPQRDLVSWNSLLFCYSKKGCDQRAV------RELFYEMLIVEKVKPDRVTMVS 372
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
++ ++ G+ VH + ++ E D + +ALIDMY KCGL+ A VF E+D
Sbjct: 373 LISGAANNGELSHGRWVHGLMIRLQLEGDAFLSSALIDMYCKCGLIERAFMVFKTATEKD 432
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
V WTSMI+G+ +A+ LF+RM+ E + PN+ T A++ + + G F
Sbjct: 433 VPLWTSMITGFAFHGYGQQALQLFKRMQEEDVTPNKVTLLAVLTACSHSGLVEEGLHVFY 492
Query: 239 RMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
M + GF P+ + +++ ++ R EA + + + ++P+ +L A
Sbjct: 493 HMKEKFGFHPETEHYGSLVDLLCRAGRLEEAKDIVQNKM--PMRPSQSMWGSILSACREG 550
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALI-DMYSKCGSL---KDARTLFEITRIKNVASW 353
I+ AL + L + G L+ ++Y+ G R E +K A +
Sbjct: 551 EDIETAE--LALSELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMESRGVKKTAGY 608
Query: 354 NAMIGCYGKHGMVDSSIELFERMLE 378
++++G G H V + + R E
Sbjct: 609 SSVVGVEGVHSFVAAEKQNHPRWTE 633
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 10/218 (4%)
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
P++ +N MIS + SK NE L+ M+ + P+ T +++A + ++I
Sbjct: 97 PNVFVYNTMISAVSSSK--NECFGLYSSMIRYRVSPDRQTFLHLMKASSFLSEV---KQI 151
Query: 307 HALVCRMG-LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM 365
H + G L + + ++L+ Y + GSL A +F I +V+S+N MI Y K G
Sbjct: 152 HCHIIVSGCLSLGNYLWNSLVKFYMELGSLGFAEKVFAIMPQPDVSSFNVMIVGYAKQGF 211
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA 425
++EL+ +M+ +G+ +E TL+ +L C H + G + ++ R V S
Sbjct: 212 GLEALELYYKMVSDGIEPDEYTLLGLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILR 271
Query: 426 -CVVDML--CR-SGRMVEAYDLLRQVPMYVTNSMAGAF 459
++DM C+ SG A+D L++ M N+M F
Sbjct: 272 NALLDMYFKCKESGLAKRAFDALKKKDMRSWNTMVVGF 309
>gi|297847764|ref|XP_002891763.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
gi|297337605|gb|EFH68022.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/520 (31%), Positives = 266/520 (51%), Gaps = 15/520 (2%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSL--KSKLVGVYAGCGDVNSARLVF 70
V + D + + S LR GK A+ + + + S +V Y G + AR +F
Sbjct: 172 VKFRDPVASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILDARSLF 231
Query: 71 DKIPNPNVFMLNWMVMASAF--TGNFQEAIGYFSLMR-EFIYRCNKFTFSIVLKACVGLL 127
D++P NV + W M + G F++ G F MR E R N T +++ +AC
Sbjct: 232 DRMPERNV--ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRACRDFF 289
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
++G Q+H + ++M E D+ +GN+LI MYSK G + A+ VF M +D VSW S+I+
Sbjct: 290 RYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWNSLIT 349
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP 247
G ++ EA LFE+M + + ++ +I ++ +G+ + F M +
Sbjct: 350 GLVQREQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEK---- 401
Query: 248 DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
D +TW AMIS F + EAL F ML + PN+ T + VL A + G +IH
Sbjct: 402 DDITWTAMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSATASLADLIEGLQIH 461
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
V +M + D+ ++L+ MY KCG+ DA +F N+ S+N MI + +G
Sbjct: 462 GRVVKMNMANDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGFSYNGFGK 521
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+++LF + G N VT +++LSAC H G V+ G + F+SMK YG++ +HYAC+
Sbjct: 522 EAVKLFSMLESTGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKFSYGIEPGPDHYACM 581
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
VD+ RSG + EAY+L+ +P + + G+ + H R DLA ++ E+
Sbjct: 582 VDLFGRSGLLDEAYNLISTMPCEPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSA 641
Query: 488 DGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
+V+LS + + G+ + + + I K K ++K PG S +
Sbjct: 642 TPYVVLSQLYSMVGKNSDCDRIMNIKKSKRIKKDPGSSWI 681
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 168/362 (46%), Gaps = 47/362 (12%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
++ YA G ++ A VFD++P N M+ +A N + + L + I N
Sbjct: 87 MISAYAENGKMSKAWQVFDEMPVRATTSYNAMI--TAMIKNKCDLGKAYELFCD-IPEKN 143
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
+++ ++ V + + ++A T + F + V+ N L+ Y + G A RVF
Sbjct: 144 AVSYATMITGFVRAGRFDEAECLYA-ETPVKFRDPVA-SNVLLSGYLRVGKWNEAVRVFE 201
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
GM ++VVS++SM+ GYC + ++ +A LF+RM E N T+ A+I Y + G
Sbjct: 202 GMAVKEVVSYSSMVDGYCKMGRILDARSLFDRMP----ERNVITWTAMIDGYFKAGFFED 257
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
F F RM EG ++ N+ T+ + +
Sbjct: 258 GFGLFLRMRQEG----------------------------------DVRVNSNTLAVMFR 283
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A + G +IH L+ RM L D+F G++LI MYSK G + +A+ +F + + K+ S
Sbjct: 284 ACRDFFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVS 343
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
WN++I + + + ELFE+M + M V+ ++ S G + K +E+F M
Sbjct: 344 WNSLITGLVQREQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMMP 399
Query: 413 ER 414
E+
Sbjct: 400 EK 401
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 18/247 (7%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLE 211
N+ I ++ G L A +F M R +VSW +MIS Y K+ +A +F+ M +
Sbjct: 54 NSQISKLARNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMPVRATT 113
Query: 212 PNQFTYNAIIASYAR-RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
+YNA+I + + + D A+ F + + + V++ MI+GF ++ R +EA
Sbjct: 114 ----SYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFDEAEC 165
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI-DVFTGSALIDMY 329
L+ + +K + + VL L+G +++G+ A+ G+ + +V + S+++D Y
Sbjct: 166 LYAE---TPVKFRDPVASNVL----LSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGY 218
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTL 388
K G + DAR+LF+ +NV +W AMI Y K G + LF RM +EG +R N TL
Sbjct: 219 CKMGRILDARSLFDRMPERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTL 278
Query: 389 ISVLSAC 395
+ AC
Sbjct: 279 AVMFRAC 285
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+F ++ I ++ G+L++A +F +++ SWNAMI Y ++G + + ++F+ M
Sbjct: 50 IFQCNSQISKLARNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMPV 109
Query: 379 EGMRANEVTLISVL-SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
+ + +++ + C G K E+F + E+ V YA ++ R+GR
Sbjct: 110 RATTSYNAMITAMIKNKCDLG----KAYELFCDIPEKNAVS-----YATMITGFVRAGRF 160
Query: 438 VEAYDLLRQVPMYVTNSMA 456
EA L + P+ + +A
Sbjct: 161 DEAECLYAETPVKFRDPVA 179
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/494 (32%), Positives = 268/494 (54%), Gaps = 23/494 (4%)
Query: 43 DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ--EAIGY 100
D N S + L G +A G + AR +FD++P NV ++W M +A+ + Q EA+
Sbjct: 232 DPNAVSWVTMLCG-FARHGKIVEARKLFDRMPCKNV--VSWNAMIAAYVQDLQIDEAVKL 288
Query: 101 FSLMREFIYR-CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYS 159
F +E Y+ C +T I VG LD + V QM ++ DV+ AL+
Sbjct: 289 F---KETPYKDCVSWTTMINGYVRVGKLD-----EAREVYNQMPYK-DVAAKTALMSGLI 339
Query: 160 KCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNA 219
+ G + A +VF + +RD + W SMI+GYC ++ EA+ LF +M ++ N ++N
Sbjct: 340 QNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVK----NAVSWNT 395
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+I+ YA+ G+ + A F M V ++++WN++I+GF Q+ +ALK M G
Sbjct: 396 MISGYAQAGEMDRATEIFEAMG----VRNVISWNSLITGFLQNGLYLDALKSLVLMGQEG 451
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
KP+ T L + ++Q+G+++H L+ + G D+F +ALI MY+KCG ++ A
Sbjct: 452 KKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAE 511
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F+ ++ SWN++I Y +G + + FE+M EG +EVT I +LSACSH G
Sbjct: 512 KVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAG 571
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
L +G+++F+ M E + ++ EHY+C+VD+L R GR+ EA++++R + + + G+
Sbjct: 572 LTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSL 631
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C +H +L E+ ++ LSN+ A G W + E LR +M+E+
Sbjct: 632 LAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAG 691
Query: 520 KQPGFSRVEKRNEF 533
K PG S +E +N+
Sbjct: 692 KLPGCSWIEVQNQI 705
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 199/436 (45%), Gaps = 69/436 (15%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ +V V+A G V+ AR +FDK+ N+ N M+ +EA F LM E
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAER--- 108
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ F++++++ ++K +++ + + D + NA+I Y+K G A +V
Sbjct: 109 -DNFSWALMITCYTRKGMLEKARELFELVPD---KLDTACWNAMIAGYAKKGRFDDAEKV 164
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M +D+VS+ SM++GY K+ A+ FERM E N ++N ++A + D
Sbjct: 165 FEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMA----ERNVVSWNLMVAGFVNNCDL 220
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+A+ F ++ P+ V+W M+ GFA+ + EA KLF M
Sbjct: 221 GSAWELFEKIPD----PNAVSWVTMLCGFARHGKIVEARKLFDRM--------------- 261
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
C+ +V + +A+I Y + + +A LF+ T K+
Sbjct: 262 -------------------PCK-----NVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDC 297
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SW MI Y + G +D + E++ +M + + A +++S G +++ ++F
Sbjct: 298 VSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAK----TALMSGLIQNGRIDEASQVFSQ 353
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA-GAFRNGCNIHGRR 469
+ +R + + ++ C+SGRM EA +L RQ+P V N+++ +G G
Sbjct: 354 LNKRDAI-----CWNSMIAGYCQSGRMSEALNLFRQMP--VKNAVSWNTMISGYAQAGEM 406
Query: 470 DLAVTMGEEFFEMGLR 485
D A E F MG+R
Sbjct: 407 DRAT---EIFEAMGVR 419
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
+H + T ++++ +++K G + DAR LF+ +N+ SWN MI Y + MV+ + +LF+
Sbjct: 44 IHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFD 103
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
M E + + +++ + G++EK E+F + + K+ + ++ +
Sbjct: 104 LMAER----DNFSWALMITCYTRKGMLEKARELFELVPD----KLDTACWNAMIAGYAKK 155
Query: 435 GRMVEAYDLLRQVP---MYVTNSM-AGAFRNG 462
GR +A + ++P + NSM AG +NG
Sbjct: 156 GRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNG 187
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 318 DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
+VF + I K G + +A+ +F KN A++N+M+ + K+G V + +LF++M
Sbjct: 16 NVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMS 75
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRM 437
+ N V+ ++++ H +VE+ ++F M ER +A ++ R G +
Sbjct: 76 QR----NLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFS-----WALMITCYTRKGML 126
Query: 438 VEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFE 481
+A +L VP + + A G GR D A E+ FE
Sbjct: 127 EKARELFELVPDKLDTACWNAMIAGYAKKGRFDDA----EKVFE 166
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 5/199 (2%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C L C AL+ GKQ+H L+ + +N + + L+ +YA CG V SA VF I
Sbjct: 461 CSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGV 520
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N ++ A G EA F M ++ TF +L AC +G +
Sbjct: 521 DLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLF 580
Query: 137 AVATQ-MGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSK 194
+ E + L+D+ + G L A + GM + + W S+++ C V K
Sbjct: 581 KCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAA-CRVHK 639
Query: 195 VDEAVVLFERMKLEGLEPN 213
E + ++L LEP+
Sbjct: 640 NME-LGKIAALRLLELEPH 657
>gi|357120134|ref|XP_003561784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Brachypodium distachyon]
Length = 466
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 223/386 (57%), Gaps = 3/386 (0%)
Query: 120 LKACVGLLDIKKGKQVHA-VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
L+AC L D G+ +HA V T+ +D V AL+DMY+KCGL+ SAR+VF M RD
Sbjct: 53 LRACAHLADAASGRLIHALVQTRPALASDEVVSTALLDMYAKCGLVYSARKVFDEMPVRD 112
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
+V W ++++GY + A+ L +M+ GL P+ T+NA ++ +A GD A
Sbjct: 113 LVVWNALLAGYARHGLPEHALALAVKMRGLGLNPDLVTWNAAVSGFAMAGDDGMASDLVC 172
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG--IKPNNVTVTGVLQAGGL 296
M +G PD+VTW +++SG + + A LFKGM+ G ++P++ T++ +L A
Sbjct: 173 AMQEDGLQPDVVTWTSLVSGSVLNFQYGRARTLFKGMVAGGARVRPSSATISSILPAFAT 232
Query: 297 TGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
G ++ G+EIH G+ ++ S+LIDMY+KCG + +AR LF+ ++ +WN+M
Sbjct: 233 VGDMKHGKEIHGYAVVTGVEQELTVRSSLIDMYTKCGLVHEARHLFDNMAERSTVTWNSM 292
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I +G ++ LF+ ML EG + + +T +VL+ACS+GG+VEKG ++R M+E YG
Sbjct: 293 IFGLANYGHCGEAVGLFDWMLREGAKPDHLTFTAVLTACSYGGMVEKGKGLYRVMQEEYG 352
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
++ EHYAC+V +L R+GR+ EA+ ++ +P+ + GA C HG +LA
Sbjct: 353 MEPRLEHYACMVHLLGRAGRLAEAHVFIKAMPVEPDRFVWGALLGACRSHGNVELAEMAA 412
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGE 502
+ +++LS A+ G+
Sbjct: 413 SRLLTVEPGNAASYLLLSGALASAGK 438
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 113/234 (48%), Gaps = 12/234 (5%)
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI-----YRCNKFTFSIVLKACVGLLDI 129
P+V + W + S NFQ +L + + R + T S +L A + D+
Sbjct: 180 QPDV--VTWTSLVSGSVLNFQYGRAR-TLFKGMVAGGARVRPSSATISSILPAFATVGDM 236
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
K GK++H A G E +++V ++LIDMY+KCGL+ AR +F M ER V+W SMI G
Sbjct: 237 KHGKEIHGYAVVTGVEQELTVRSSLIDMYTKCGLVHEARHLFDNMAERSTVTWNSMIFGL 296
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPD 248
N EAV LF+ M EG +P+ T+ A++ + + G + M E G P
Sbjct: 297 ANYGHCGEAVGLFDWMLREGAKPDHLTFTAVLTACSYGGMVEKGKGLYRVMQEEYGMEPR 356
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI 302
L + M+ ++ R EA K M V +P+ +L A G++++
Sbjct: 357 LEHYACMVHLLGRAGRLAEAHVFIKAMPV---EPDRFVWGALLGACRSHGNVEL 407
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 159/377 (42%), Gaps = 16/377 (4%)
Query: 31 QGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
G+ +HAL+ T + + L+ +YA CG V SAR VFD++P ++ + N ++
Sbjct: 64 SGRLIHALVQTRPALASDEVVSTALLDMYAKCGLVYSARKVFDEMPVRDLVVWNALLAGY 123
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
A G + A+ MR + T++ + D + + G + DV
Sbjct: 124 ARHGLPEHALALAVKMRGLGLNPDLVTWNAAVSGFAMAGDDGMASDLVCAMQEDGLQPDV 183
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGM------FERDVVSWTSMISGYCNVSKVDEAVVLF 202
+L+ AR +F GM + +S++ + V + +
Sbjct: 184 VTWTSLVSGSVLNFQYGRARTLFKGMVAGGARVRPSSATISSILPAFATVGDMKHGKEIH 243
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
+ G+E +++I Y + G + A F M VTWN+MI G A
Sbjct: 244 GYAVVTGVEQELTVRSSLIDMYTKCGLVHEARHLFDNMAER----STVTWNSMIFGLANY 299
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC-RMGLHIDVFT 321
EA+ LF ML G KP+++T T VL A G ++ G+ ++ ++ G+ +
Sbjct: 300 GHCGEAVGLFDWMLREGAKPDHLTFTAVLTACSYGGMVEKGKGLYRVMQEEYGMEPRLEH 359
Query: 322 GSALIDMYSKCGSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERML--E 378
+ ++ + + G L +A + ++ + W A++G HG V+ + R+L E
Sbjct: 360 YACMVHLLGRAGRLAEAHVFIKAMPVEPDRFVWGALLGACRSHGNVELAEMAASRLLTVE 419
Query: 379 EGMRANEVTLISVLSAC 395
G A+ + L L++
Sbjct: 420 PGNAASYLLLSGALASA 436
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 6/210 (2%)
Query: 29 LRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
++ GK++H + T +++S L+ +Y CG V+ AR +FD + + N M+
Sbjct: 236 MKHGKEIHGYAVVTGVEQELTVRSSLIDMYTKCGLVHEARHLFDNMAERSTVTWNSMIFG 295
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV-ATQMGFEN 146
A G+ EA+G F M + + TF+ VL AC ++KGK ++ V + G E
Sbjct: 296 LANYGHCGEAVGLFDWMLREGAKPDHLTFTAVLTACSYGGMVEKGKGLYRVMQEEYGMEP 355
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+ ++ + + G L A M E D W +++ + V+ A + R
Sbjct: 356 RLEHYACMVHLLGRAGRLAEAHVFIKAMPVEPDRFVWGALLGACRSHGNVELAEMAASR- 414
Query: 206 KLEGLEP-NQFTYNAIIASYARRGDSNAAF 234
L +EP N +Y + + A G F
Sbjct: 415 -LLTVEPGNAASYLLLSGALASAGKQTDVF 443
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 239/462 (51%), Gaps = 41/462 (8%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
AR +FD N F+ N ++ A E+I ++L+ R + TF+ + A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
+ + +H+ + GFE+D LI Y+K G LC ARRVF M +RDV W +M
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
I+G Y RRGD AA F M +
Sbjct: 155 ITG-----------------------------------YQRRGDMKAAMELFDSMPRK-- 177
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGR 304
++ +W +ISGF+Q+ +EALK+F M +KPN++TV VL A G ++IGR
Sbjct: 178 --NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 235
Query: 305 EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE-ITRIKNVASWNAMIGCYGKH 363
+ G +++ +A I+MYSKCG + A+ LFE + +N+ SWN+MIG H
Sbjct: 236 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 295
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
G D ++ LF +ML EG + + VT + +L AC HGG+V KG E+F+SM+E + + EH
Sbjct: 296 GKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEH 355
Query: 424 YACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMG 483
Y C++D+L R G++ EAYDL++ +PM + G C+ HG ++A E F++
Sbjct: 356 YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLE 415
Query: 484 LRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
P V++SNI AA+ +W +RK+MK++ + K G+S
Sbjct: 416 PTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 10/252 (3%)
Query: 57 YAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLM-REFIYRCNK 113
Y GD+ +A +FD +P NV +W + S F+ GN+ EA+ F M ++ + N
Sbjct: 158 YQRRGDMKAAMELFDSMPRKNV--TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNH 215
Query: 114 FTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
T VL AC L +++ G+++ A + GF +++ V NA I+MYSKCG++ A+R+F
Sbjct: 216 ITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEE 275
Query: 174 M-FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
+ +R++ SW SMI K DEA+ LF +M EG +P+ T+ ++ + G
Sbjct: 276 LGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVK 335
Query: 233 AFAFFSRM-TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
F M P L + MI + + EA L K M +KP+ V +L
Sbjct: 336 GQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM---PMKPDAVVWGTLL 392
Query: 292 QAGGLTGSIQIG 303
A G+++I
Sbjct: 393 GACSFHGNVEIA 404
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/512 (31%), Positives = 264/512 (51%), Gaps = 29/512 (5%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFI 108
S L+ + A GD+ SAR VFD + V + W ++ S + +EA+ F E
Sbjct: 192 SALIDMLARNGDLASARKVFDGLIEKTVVV--WTLLISRYVQGECAEEAVELFLDFLEDG 249
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL---LC 165
+ +++T S ++ AC L ++ G Q+H++A +MG +D V L+DMY+K + +
Sbjct: 250 FEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMD 309
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVS-KVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
A +VF M + DV+SWT++ISGY + ++ + LF M E ++PN TY++I+ S
Sbjct: 310 YANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSC 369
Query: 225 ARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP-- 282
A D ++ + + NA++S +A+S EA ++F + + P
Sbjct: 370 ASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCI 429
Query: 283 -------------------NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
++ T ++ A G + G+++HA+ + G D F +
Sbjct: 430 TEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSN 489
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
+L+ MYS+CG L+DA F + +NV SW +MI KHG + ++ LF M+ G++
Sbjct: 490 SLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKP 549
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
N+VT I+VLSACSH GLV +G E FRSM+ +G+ EHYAC+VD+L RSG + EA +
Sbjct: 550 NDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEF 609
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ ++P+ + C H ++ + E+ R P +V+LSN+ A G W
Sbjct: 610 INEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLW 669
Query: 504 HEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
E +R M++ N+ K+ G S +E N E
Sbjct: 670 DEVARIRSAMRDNNLNKETGLSWMEVENTTHE 701
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 145/539 (26%), Positives = 246/539 (45%), Gaps = 71/539 (13%)
Query: 29 LRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
LR G+ +H L DL + + L+ +Y+ CG V SAR VFD + +++W M
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLR-DIVSWTAM 122
Query: 87 ASAFTGNFQEAIGYFSLMREFIYR---CNKFTFSIVLKACVGL-LDIKKGKQVHAVATQM 142
AS N E G L+ E + N +T AC L G V + +M
Sbjct: 123 ASCLARNGAER-GSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKM 181
Query: 143 G-FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
G + DV+VG+ALIDM ++ G L SAR+VF G+ E+ VV WT +IS Y +EAV L
Sbjct: 182 GLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEL 241
Query: 202 FERMKLEGLEPNQFTYNAIIAS-----------------------------------YAR 226
F +G EP+++T +++I++ YA+
Sbjct: 242 FLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAK 301
Query: 227 RGDSNA---AFAFFSRMTAEGFVPDLVTWNAMISGFAQSK-RENEALKLFKGMLVSGIKP 282
A A F RM D+++W A+ISG+ QS +EN+ + LF ML IKP
Sbjct: 302 SNIGQAMDYANKVFERMPKN----DVISWTALISGYVQSGVQENKVMALFGEMLNESIKP 357
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N++T + +L++ GR++HA V + G+AL+ MY++ G +++AR +F
Sbjct: 358 NHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVF 417
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
N +MI C + L R++ + + T S++SA + G++
Sbjct: 418 ------NQLYERSMIPCITE----GRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLT 467
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
KG ++ +M + G + +V M R G + +A ++ L+ + SM
Sbjct: 468 KGQQL-HAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMI--- 523
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENLRKIMKEKN 517
+G HG + A+++ + G++ D ++ + + C+ G E + + M+ +
Sbjct: 524 -SGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDH 581
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 238/447 (53%), Gaps = 40/447 (8%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+ + AC+ + +G+QVHA + V +G L+ MY +CG L AR V M
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------ 223
ER VVSWT+MISGY + EA+ LF +M G PN++T ++ S
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 224 -----------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
YA+ + A F + D+V+ A+ISG+A
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPER----DVVSCTAIISGYA 188
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q + EAL LF+ + G++ N+VT T ++ A S+ G+++HAL+ R L V
Sbjct: 189 QKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVA 248
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
++LIDMYSKCG L +R +F+ ++V SWNAM+ YG+HG+ I LF+ + +E
Sbjct: 249 LQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE- 307
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++ + VTL++VLS CSHGGLV++GL+IF ++ + + HY C++D+L RSGR+ +A
Sbjct: 308 VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKA 367
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
+L+ +P T S+ G+ C +H + + ++ EM +V+LSNI AA
Sbjct: 368 LNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAA 427
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRV 527
G W + +RK+M EK V K+PG S +
Sbjct: 428 GMWKDVFKVRKLMLEKTVTKEPGQSWI 454
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 196/395 (49%), Gaps = 45/395 (11%)
Query: 23 CMKSKALRQGKQVHALLCTNDLN--IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
C++ +AL +G+QVHA + T +F L ++LV +Y CG ++ AR V D++P +V
Sbjct: 20 CIERRALWEGRQVHARMITARYRPAVF-LGTRLVTMYVRCGALDDARNVLDRMPERSV-- 76
Query: 81 LNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
++W M S + T EA+ F M N++T + VL +C G I +GKQVH++
Sbjct: 77 VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 136
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ FE+ + VG++L+DMY+K + ARRVF + ERDVVS T++ISGY +EA
Sbjct: 137 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 196
Query: 199 VVLFERMKLEGLEPNQFTYNAIIAS--------YARRGD--------------------- 229
+ LF ++ EG++ N T+ ++ + Y ++
Sbjct: 197 LDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDM 256
Query: 230 -SNAAFAFFSRMTAEGFVP-DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
S +SR + + +V+WNAM+ G+ + +E + LFK L +KP++VT+
Sbjct: 257 YSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVKPDSVTL 315
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMG---LHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
VL G + G +I V + LH + +ID+ + G L+ A L E
Sbjct: 316 LAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY--GCIIDLLGRSGRLEKALNLIEN 373
Query: 345 TRIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLE 378
++ S W +++G H V + +++LE
Sbjct: 374 MPFESTPSIWGSLLGACRVHANVHVGELVAQKLLE 408
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 134/262 (51%), Gaps = 3/262 (1%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C +++ QGKQVH+LL TN + + S L+ +YA ++ AR VFD +P
Sbjct: 114 LATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+V ++ A G +EA+ F + +CN TF+ ++ A GL + GKQ
Sbjct: 174 ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQ 233
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VHA+ + V++ N+LIDMYSKCG L +RRVF M ER VVSW +M+ GY
Sbjct: 234 VHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGL 293
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWN 253
E + LF+ + E ++P+ T A+++ + G + F + E + +
Sbjct: 294 GHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYG 352
Query: 254 AMISGFAQSKRENEALKLFKGM 275
+I +S R +AL L + M
Sbjct: 353 CIIDLLGRSGRLEKALNLIENM 374
>gi|302142753|emb|CBI19956.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 257/489 (52%), Gaps = 54/489 (11%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+ + LV +YA CG+V +R VFD +P N N M+ G+ + A+ F M
Sbjct: 2 IGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMS--- 58
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
++ V ++ +ID +++ G +AR
Sbjct: 59 -----------IRTAVTWIE-------------------------MIDGFARSGDTETAR 82
Query: 169 RVFHGMFE--RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
R F + R+VV+WT M+ GY ++++ A +FE M + N F ++++I+ Y +
Sbjct: 83 RFFDDVPSELRNVVTWTVMVDGYARNAEMEAAREVFEGMP----QRNFFAWSSMISGYCK 138
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
+G+ A + F R+ V +LV WN++ISG+AQ+ EAL+ F M G +P+ VT
Sbjct: 139 KGNVKEARSIFDRIP----VRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVT 194
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ VL A G + G++IH ++ G+ ++ F + L+DMY+KCG L +AR +FE
Sbjct: 195 IASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMA 254
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+N A WN+MI + HG ++E F RM + +E+T +SVLSAC+HGG V GLE
Sbjct: 255 HRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLE 314
Query: 407 IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIH 466
IF M E+YG+ +HY C++D+L R+GR+ EAYDL++++P+ + + GA C +H
Sbjct: 315 IFSRM-EKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVVWGALLGACRVH 373
Query: 467 GRRDLAVTMGEEFFEMGLRKPDG----FVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
++A + EE ++ G +V+LSNI AA W +AE +R M K QK
Sbjct: 374 LDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMRMEMANKGFQKTS 433
Query: 523 GFSRVEKRN 531
G S + N
Sbjct: 434 GCSSIMPGN 442
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 131/251 (52%), Gaps = 8/251 (3%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
N F+ S + G Y G+V AR +FD+IP N+ N ++ A G +EA+ F M
Sbjct: 125 NFFAWSSMISG-YCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKM 183
Query: 105 REFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
+ + ++ T + VL AC +GLLD GK++H + G + + V N L+DMY+KCG
Sbjct: 184 QAEGFEPDEVTIASVLSACSQLGLLD--AGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCG 241
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
L +AR +F GM R+ W SMISG+ + EA+ F RM+ P++ T+ ++++
Sbjct: 242 DLANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLS 301
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+ A G NA FSRM G + + +I ++ R EA L K M V KP
Sbjct: 302 ACAHGGFVNAGLEIFSRMEKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPV---KP 358
Query: 283 NNVTVTGVLQA 293
N+V +L A
Sbjct: 359 NDVVWGALLGA 369
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 173/546 (31%), Positives = 266/546 (48%), Gaps = 73/546 (13%)
Query: 54 VGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNK 113
V A G V+ AR +FD +P+ +V MV A A G QEA F R N
Sbjct: 48 VAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPDA---RRNV 104
Query: 114 FTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG----------- 162
T++ +L G ++ + A+ M N VS N +++ Y+ G
Sbjct: 105 VTWTALLS---GYARARRVDEAEALFEGMAERNVVS-WNTMLEAYTAVGRVEDASALFNR 160
Query: 163 -----------LLCS---------ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
LLC AR++F M RDV+SWT+MISG VD+A VLF
Sbjct: 161 MPVRDAGSWNILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLF 220
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE----------GFVPD---- 248
+ M E N ++NA+I+ YAR A F++M GF+ +
Sbjct: 221 DAMP----ERNVVSWNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLK 276
Query: 249 -------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
++TW M++G+ Q + ALKLF MLV GI+PN VT G L A
Sbjct: 277 SARQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACS 336
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
++ G+++H ++C+ D F S L+++Y+KCG ++ AR +F+ + K++ SWN
Sbjct: 337 NLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNG 396
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
+I Y HG ++ L++ M E G + N+ T + +LSACSH GLV++GL+IF SM +
Sbjct: 397 IIAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDN 456
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA-GAFRNGCNIHGRRDLAVT 474
+ + EHY C+VD+ R+GR+ +A L+ + T+S A GCN HG +
Sbjct: 457 SIVVRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSHGNESIGDL 516
Query: 475 MGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE-- 532
+ E + +L NI A+ G+W EA +R M + ++KQPG S +E N+
Sbjct: 517 AAKHLLEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGLKKQPGCSWIEVANKVH 576
Query: 533 -FVEKE 537
FV ++
Sbjct: 577 VFVSRD 582
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 121/231 (52%), Gaps = 15/231 (6%)
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
N V N + + G + ARR+F GM +RDVVSWT+M++ Y + EA VLF+R
Sbjct: 39 NHVQDSNWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDR- 97
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
N T+ A+++ YAR + A A F M ++V+WN M+ + R
Sbjct: 98 --PDARRNVVTWTALLSGYARARRVDEAEALFEGMAER----NVVSWNTMLEAYTAVGRV 151
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
+A LF M V N+ + G+++ +GS++ R++ RM + DV + + +
Sbjct: 152 EDASALFNRMPVRDAGSWNILLCGLVR----SGSLERARKMFE---RMPVR-DVMSWTTM 203
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
I ++ GS+ DA LF+ +NV SWNAMI Y ++ ++ +++LF +M
Sbjct: 204 ISGLARNGSVDDAWVLFDAMPERNVVSWNAMISGYARNHRIEEALDLFTKM 254
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 109/236 (46%), Gaps = 17/236 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLC--TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L C AL +G+QVH ++C + + F ++S L+ +YA CG++ AR VFD +
Sbjct: 332 LDACSNLAALCEGQQVHQMICKTPSQFDTF-VESTLMNLYAKCGEIRLARNVFDFSMEKD 390
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQV 135
+ N ++ A A G EA+ + M+E Y+ N T+ +L AC GL+D +G ++
Sbjct: 391 LISWNGIIAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVD--EGLKI 448
Query: 136 HAVATQMGFENDVSVGN----ALIDMYSKCGLLCSARRVFHGMFERDVVS--WTSMISGY 189
M +N + V + L+D+ S+ G L A+R+ + S W++++ G
Sbjct: 449 F---ESMVKDNSIVVRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGG- 504
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
CN + L + LE N TY + YA G A S M G
Sbjct: 505 CNSHGNESIGDLAAKHLLEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGL 560
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/484 (30%), Positives = 245/484 (50%), Gaps = 47/484 (9%)
Query: 48 SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREF 107
+ S L G+ G + A+ +F KIP P+ N M+ N + A +F M
Sbjct: 8 TWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDM--- 64
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSA 167
IK D N +I +++ + A
Sbjct: 65 --------------------PIK----------------DTPSWNTMITGFAQNQQMDKA 88
Query: 168 RRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARR 227
R +F M ++VV+W +MISGY +D A+ LFE+ + + + A+I Y +
Sbjct: 89 RDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSV----VAWTAMITGYMKL 144
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
G A F +M + +LVTWNAMI+G+ ++ R + +KLF+ M+ GI+PN+ T+
Sbjct: 145 GRIGLAERLFEKMPEK----NLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTL 200
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
+ L ++Q+GR++H LVC+ L D G++LI MY KCG L+D LF
Sbjct: 201 SSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPR 260
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
++V +WNAMI Y +HG ++ LF+ M+E+GM+ + +T ++VL AC+H G + G++
Sbjct: 261 RDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKY 320
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
F SM + YG+ +HY C+VD+L R+G++VEA DL+ ++P ++ G C IH
Sbjct: 321 FHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHK 380
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
++A ++ + G+V L+N+ AA W +RK MK V K PG+S +
Sbjct: 381 NTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWI 440
Query: 528 EKRN 531
E ++
Sbjct: 441 EVKS 444
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 157/331 (47%), Gaps = 26/331 (7%)
Query: 174 MFERDVVSWTSMISGYCNV-SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
M + V+W S+++G K+ EA LF ++ EP+ +YN +++ Y R +
Sbjct: 1 MTLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIP----EPDAVSYNTMLSCYVRNSNMER 56
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
A AFF M + D +WN MI+GFAQ+++ ++A LF M + N ++G ++
Sbjct: 57 AQAFFEDMP----IKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVE 112
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
G L ++++ + V +A+I Y K G + A LFE KN+ +
Sbjct: 113 CGDLDSALKLFEK--------APFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVT 164
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
WNAMI Y ++ + ++LF M+ G++ N TL S L CS ++ G ++ + +
Sbjct: 165 WNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQ-LV 223
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRR 469
+ + ++ M C+ G + + + L QVP + N+M + HG
Sbjct: 224 CKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQ----HGEG 279
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
A+ + +E E G+ KPD ++ + A +
Sbjct: 280 KKALGLFDEMIEKGM-KPDWITFVAVLMACN 309
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 9/233 (3%)
Query: 6 FPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVN 64
F I S LLG C + AL+ G+QVH L+C + L + + + L+ +Y CG +
Sbjct: 191 FGIQPNSSTLSSALLG-CSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLE 249
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC- 123
+F ++P +V N M+ A G ++A+G F M E + + TF VL AC
Sbjct: 250 DGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACN 309
Query: 124 -VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSW 182
G D+ K H++A G ++D+ + G L A + M + +
Sbjct: 310 HAGFTDLGV-KYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAV 368
Query: 183 TSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT-YNAIIASYA--RRGDSNA 232
+ G C + K E + F KL L+P T Y + YA +R D A
Sbjct: 369 FGTLLGACRIHKNTE-MAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVA 420
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 239/462 (51%), Gaps = 41/462 (8%)
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG 125
AR +FD N F+ N ++ A E+I ++L+ R + TF+ + A
Sbjct: 28 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 87
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
+ + +H+ + GFE+D LI Y+K G LC ARRVF M +RDV W +M
Sbjct: 88 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 147
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
I+G Y RRGD AA F M +
Sbjct: 148 ITG-----------------------------------YQRRGDMKAAMELFDSMPRK-- 170
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGR 304
++ +W +ISGF+Q+ +EALK+F M +KPN++TV VL A G ++IGR
Sbjct: 171 --NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 228
Query: 305 EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE-ITRIKNVASWNAMIGCYGKH 363
+ G +++ +A I+MYSKCG + A+ LFE + +N+ SWN+MIG H
Sbjct: 229 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 288
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
G D ++ LF +ML EG + + VT + +L AC HGG+V KG E+F+SM+E + + EH
Sbjct: 289 GKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEH 348
Query: 424 YACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMG 483
Y C++D+L R G++ EAYDL++ +PM + G C+ HG ++A E F++
Sbjct: 349 YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLE 408
Query: 484 LRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
P V++SNI AA+ +W +RK+MK++ + K G+S
Sbjct: 409 PTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 450
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 10/252 (3%)
Query: 57 YAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLM-REFIYRCNK 113
Y GD+ +A +FD +P NV +W + S F+ GN+ EA+ F M ++ + N
Sbjct: 151 YQRRGDMKAAMELFDSMPRKNV--TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNH 208
Query: 114 FTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
T VL AC L +++ G+++ A + GF +++ V NA I+MYSKCG++ A+R+F
Sbjct: 209 ITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEE 268
Query: 174 M-FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
+ +R++ SW SMI K DEA+ LF +M EG +P+ T+ ++ + G
Sbjct: 269 LGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVK 328
Query: 233 AFAFFSRM-TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
F M P L + MI + + EA L K M +KP+ V +L
Sbjct: 329 GQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM---PMKPDAVVWGTLL 385
Query: 292 QAGGLTGSIQIG 303
A G+++I
Sbjct: 386 GACSFHGNVEIA 397
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/510 (30%), Positives = 265/510 (51%), Gaps = 17/510 (3%)
Query: 26 SKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNS---ARLVFDKIPNPNVFMLN 82
S + + +Q+H L N+FS + + C +NS A +F + N ++ N
Sbjct: 52 SNSTHKLRQIHGQLYR--CNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFN 109
Query: 83 WMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
++ A F+ +I +F LM ++ ++ TF VLK+ L + G+ +H +
Sbjct: 110 ALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKF 169
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER----DVVSWTSMISGYCNVSKVDEA 198
G E D V +L+DMY K L SA +VF E V+ W +I GYC + + +A
Sbjct: 170 GLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKA 229
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
LF+ M + + ++N++I + + GD A F +M + ++V+W M++G
Sbjct: 230 TELFDSMP----KKDTGSWNSLINGFMKMGDMGRAKELFVKMPEK----NVVSWTTMVNG 281
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
F+Q+ +AL+ F ML G +PN+ T+ L A G++ G IH + G ++
Sbjct: 282 FSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLN 341
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+ G+AL+DMY+KCG+++ A +F T+ K + W+ MI + HG +++ FE M
Sbjct: 342 LVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKF 401
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
G + + V ++VL+ACSH G V +GL+ F +M+ Y ++ S +HY VVDML R+GR+
Sbjct: 402 TGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLD 461
Query: 439 EAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
EA +R +P+ + GA C H ++A ++ ++ + P +V LSN A
Sbjct: 462 EALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYA 521
Query: 499 ADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ G W +AE +R M++ K PG+S +E
Sbjct: 522 SVGRWDDAERVRVSMRDHGAHKDPGWSFIE 551
>gi|357486633|ref|XP_003613604.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514939|gb|AES96562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 271/528 (51%), Gaps = 57/528 (10%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLV 69
SV + L + +K+++ Q QVH L C + +++ + + LV Y+ CG + S+ V
Sbjct: 137 SVTIVSLLSARDVKNQSHVQ--QVHCLACKLGVEYDVY-VSTSLVTAYSKCGVLVSSNKV 193
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIY----RCNKFTFSIVLKACVG 125
F+ + NV N M+ F + F + ++ + NK T V+ AC
Sbjct: 194 FENLRVKNVVTYN-AFMSGLLQNGFHRVV--FDVFKDMTMNLEEKPNKVTLVSVVSACAT 250
Query: 126 LLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSM 185
L +I+ GKQVH ++ ++ + V V +L+DMYSKCG SA VF +R++++W
Sbjct: 251 LSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITW--- 307
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
N++IA +S A F RM EG
Sbjct: 308 --------------------------------NSMIAGMMMNSESERAVELFERMVDEGI 335
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
+PD TWN++ISGFAQ EA K F M +G+ P +T +L G + ++ +
Sbjct: 336 LPDSATWNSLISGFAQKGVCVEAFKYFSKMQCAGVAPCLKILTSLLSVCGDSCVLRSAKA 395
Query: 306 IHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK--NVASWNAMIGCYGKH 363
IH R+ + D F +AL+D Y KCG + AR +F+ +K + A WNAMIG YG +
Sbjct: 396 IHGYALRICVDKDDFLATALVDTYMKCGCVSFARFVFDQFDVKPDDPAFWNAMIGGYGTN 455
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
G +S+ E+F ML+E ++ N T +SVLSACSH G +E+GL FR M +YG+ EH
Sbjct: 456 GDYESAFEVFYEMLDEMVQPNSATFVSVLSACSHSGQIERGLRFFR-MIRKYGLDPKPEH 514
Query: 424 YACVVDMLCRSGRMVEAYDLLRQV---PMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF 480
+ CVVD+L R+G++ EA DL++++ P V +S+ GA C + +L M +
Sbjct: 515 FGCVVDLLGRAGQLGEARDLVQELAEPPASVFDSLLGA----CRCYLDSNLGEEMAMKLI 570
Query: 481 EMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
++ + P V+LSNI AA G W E E +R ++ +K + K G S +E
Sbjct: 571 DIEPKNPAPLVVLSNIYAALGRWSEVERIRGLITDKGLDKNSGISMIE 618
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 165/353 (46%), Gaps = 32/353 (9%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G ++EA+ +S + N FTF I+LKAC L + + +HA + GF +
Sbjct: 14 GLYKEALNLYSHLHSSSPTPNTFTFPILLKACSNLSSPSQTQILHAHLFKTGFHSHPHTS 73
Query: 152 NALIDMY-SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
ALI Y + A +F M + + ++ +++SG +AV LF ++ +
Sbjct: 74 TALIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNI 133
Query: 211 EPNQFTYNAIIASYARRGDSNA---------------AFAFFSRMTAEG----------- 244
PN T +++++ + S+ + S +TA
Sbjct: 134 RPNSVTIVSLLSARDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKV 193
Query: 245 ----FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGS 299
V ++VT+NA +SG Q+ +FK M ++ KPN VT+ V+ A +
Sbjct: 194 FENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLSN 253
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
I++G+++H L ++ V ++L+DMYSKCG A +F + +N+ +WN+MI
Sbjct: 254 IRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMIAG 313
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK 412
+ + ++ELFERM++EG+ + T S++S + G+ + + F M+
Sbjct: 314 MMMNSESERAVELFERMVDEGILPDSATWNSLISGFAQKGVCVEAFKYFSKMQ 366
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 138/268 (51%), Gaps = 28/268 (10%)
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS-NAAFAFFSRMTAEGFVPDL 249
N+S + +L + G + T A+IASYA S + A F M P +
Sbjct: 47 NLSSPSQTQILHAHLFKTGFHSHPHTSTALIASYAANTRSFHYALELFDEMPQ----PTI 102
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
+NA++SG +++ +A+ LF+ + I+PN+VT+ +L A + + +++H L
Sbjct: 103 TAFNAVLSGLSRNGPRGQAVWLFRQIGFWNIRPNSVTIVSLLSARDVKNQSHV-QQVHCL 161
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
C++G+ DV+ ++L+ YSKCG L + +FE R+KNV ++NA + ++G
Sbjct: 162 ACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQNGFHRVV 221
Query: 370 IELFERM---LEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
++F+ M LEE + N+VTL+SV+SAC+ L R K+ +G+ + E AC
Sbjct: 222 FDVFKDMTMNLEE--KPNKVTLVSVVSACA-------TLSNIRLGKQVHGLSMKLE--AC 270
Query: 427 --------VVDMLCRSGRMVEAYDLLRQ 446
+VDM + G A+D+ +
Sbjct: 271 DHVMVVTSLVDMYSKCGCWGSAFDVFSR 298
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/493 (33%), Positives = 258/493 (52%), Gaps = 53/493 (10%)
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFT-FSIVLKACVGLLDIKKG 132
P+PN+ L +G +EA+ L + R KF + +L CV I++G
Sbjct: 33 PSPNLKTL-------CSSGQLKEAL----LQMAILGREVKFEGYDSILNECVSQRAIREG 81
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
++VH + + V + LI +Y+KC L AR +F M +R+VVSWT+MIS Y
Sbjct: 82 QRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQR 141
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIAS----------------------------- 223
EA+ LF M EPN FT+ I+ S
Sbjct: 142 GFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVG 201
Query: 224 ------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
YA+ G A F + D+V A+ISG+AQ + EALKLF+ + +
Sbjct: 202 SSLLDMYAKSGRICDAHGVFHCLPER----DVVACTAIISGYAQMGLDEEALKLFRQLQI 257
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G+ N+VT VL A ++ G+++H+ V R G + V ++LIDMYSKCG++
Sbjct: 258 EGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCY 317
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACS 396
AR +F+ + SWNAM+ Y KHGM +ELF+ M EE ++ + +T ++VLS CS
Sbjct: 318 ARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCS 377
Query: 397 HGGLVEKGLEIFRSM-KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
HG L + GLEIF +M + G++ HY CVVD+L R+GR+ EA+D ++++P T ++
Sbjct: 378 HGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAI 437
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
G+ C +H ++ + +G++ E+ +V+LSN+ A+ G+W + N+R +M+E
Sbjct: 438 WGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQE 497
Query: 516 KNVQKQPGFSRVE 528
K V K+PG S VE
Sbjct: 498 KAVTKEPGRSWVE 510
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 219/422 (51%), Gaps = 51/422 (12%)
Query: 17 DCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
D +L +C+ +A+R+G++VH ++ T L L+++L+ +Y C + AR +FD++P
Sbjct: 66 DSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQ 125
Query: 76 PNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
NV ++W M SA++ G EA+ F M N FTF+ +L +C G L + G+
Sbjct: 126 RNV--VSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGR 183
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H++A + +E+ + VG++L+DMY+K G +C A VFH + ERDVV+ T++ISGY +
Sbjct: 184 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMG 243
Query: 194 KVDEAVVLFERMKLEGLEPNQFTY-----------------------------------N 218
+EA+ LF ++++EG+ N TY N
Sbjct: 244 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLN 303
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
++I Y++ G+ A F M ++WNAM+ G+++ E L+LFK M
Sbjct: 304 SLIDMYSKCGNVCYARRIFDSMPER----TCISWNAMLVGYSKHGMAREVLELFKLMREE 359
Query: 279 G-IKPNNVTVTGVLQAGGLTGSIQ-IGREI--HALVCRMGLHIDVFTGSALIDMYSKCGS 334
+KP+++T VL +G G ++ +G EI + + + G+ D+ ++D+ + G
Sbjct: 360 NKVKPDSITYLAVL-SGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGR 418
Query: 335 LKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE-EGMRANEVTLISVL 392
+++A ++ + A W +++G H V+ I + +++LE E A ++S L
Sbjct: 419 VEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNL 478
Query: 393 SA 394
A
Sbjct: 479 YA 480
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 159/343 (46%), Gaps = 20/343 (5%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C S G+Q+H++ + ++F + S L+ +YA G + A VF +P
Sbjct: 169 ILTSCYGSLGFETGRQIHSIAIKRNYESHMF-VGSSLLDMYAKSGRICDAHGVFHCLPER 227
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+V ++ A G +EA+ F ++ N T++ VL A GL + GKQVH
Sbjct: 228 DVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVH 287
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ + G + V + N+LIDMYSKCG +C ARR+F M ER +SW +M+ GY
Sbjct: 288 SHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAR 347
Query: 197 EAVVLFERMKLEG-LEPNQFTYNAIIASYARRGDSNAAFAFFSRMT--AEGFVPDLVTWN 253
E + LF+ M+ E ++P+ TY A+++ + + F M +G PD+ +
Sbjct: 348 EVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYG 407
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR--EIHALVC 311
++ ++ R EA K M V G L GS ++ EI +V
Sbjct: 408 CVVDLLGRAGRVEEAFDFIKKMPF---------VPTAAIWGSLLGSCRVHSDVEIGIIVG 458
Query: 312 RMGLHIDVFTGS---ALIDMYSKCGSLKDARTLFEITRIKNVA 351
+ L ++ L ++Y+ G +D R + ++ + K V
Sbjct: 459 QKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVT 501
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/507 (30%), Positives = 269/507 (53%), Gaps = 13/507 (2%)
Query: 27 KALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGD-VNSARLVFDKIPNPNVFMLNW 83
K LR Q+H + D + + + ++ D + AR + P P+ FM N
Sbjct: 183 KNLRALTQIHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFPEPDAFMFNT 242
Query: 84 MVMASAFTGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
+V + + ++ F +MR+ + F+F+ V+KA ++ G Q+H A +
Sbjct: 243 LVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALKH 302
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G ++ + V LI MY +CG + AR+VF M + ++V+W ++++ + V A +F
Sbjct: 303 GLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAREIF 362
Query: 203 ERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQS 262
++M L N ++N ++A Y + G+ A FS M D V+W+ MI GF+ +
Sbjct: 363 DKM----LVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHR----DDVSWSTMIVGFSHN 414
Query: 263 KRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
NE+ F+ +L + ++PN V++TGVL A +G+ + G+ +H V + G V
Sbjct: 415 GSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVN 474
Query: 323 SALIDMYSKCGSLKDARTLFE-ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGM 381
+ALIDMYS+CG++ AR +FE + +++ SW +MI HG + +I +F M E G+
Sbjct: 475 NALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGV 534
Query: 382 RANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAY 441
+E++ IS+L ACSH GL+++G F MK Y ++ + EHY C+VD+ RSG++ +AY
Sbjct: 535 MPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAY 594
Query: 442 DLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADG 501
+ Q+P+ T + C+ HG +LA + + E+ V+LSN+ A G
Sbjct: 595 SFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVYATAG 654
Query: 502 EWHEAENLRKIMKEKNVQKQPGFSRVE 528
+W + ++RK M + ++K +S VE
Sbjct: 655 KWKDVASIRKSMIVQRIKKITAWSLVE 681
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/477 (31%), Positives = 257/477 (53%), Gaps = 25/477 (5%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVL 120
GD+ AR +FD IP P+VF N M + + + + M E + + +T+ +
Sbjct: 62 GDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLF 121
Query: 121 KACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
K + ++ G+++H + G +++V NALI+MYS CGL+ AR +F + DVV
Sbjct: 122 KGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVV 181
Query: 181 SWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM 240
+W +MISGY + K + ++ AI+ + G +AA +F +M
Sbjct: 182 TWNAMISGYNRIKK------------------DVISWTAIVTGFVNTGQVDAARKYFHKM 223
Query: 241 TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI 300
D V+W AMI G+ + EAL LF+ M S IKP+ T+ VL A G++
Sbjct: 224 PER----DHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGAL 279
Query: 301 QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCY 360
++G I + + + D F G+ALIDMY KCG+++ A ++F ++ +W AM+
Sbjct: 280 ELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGL 339
Query: 361 GKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKIS 420
+G + ++ +F +ML+ + +EVT + VLSAC+H G+V++G + F SM R+G++ +
Sbjct: 340 AINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPN 399
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF 480
HY C+VD+L ++G + EA+++++ +PM + + GA C IH ++A E+
Sbjct: 400 IAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQIL 459
Query: 481 EMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR---NEFV 534
E+ +V+ NI AA +W + LR++M ++ ++K PG S +E +EFV
Sbjct: 460 ELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFV 516
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 165/376 (43%), Gaps = 66/376 (17%)
Query: 25 KSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
+S AL+ G+++H + D N+F+ + L+ +Y+ CG ++ AR +FD +V N
Sbjct: 126 RSVALQLGRELHCHVVKYGLDSNVFA-HNALINMYSLCGLIDMARGIFDMSCKSDVVTWN 184
Query: 83 ---------------WMVMASAF--TGNFQEAIGYFSLMRE------------------- 106
W + + F TG A YF M E
Sbjct: 185 AMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCY 244
Query: 107 ----FIYR--------CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNAL 154
++R ++FT VL AC L ++ G+ + + +ND VGNAL
Sbjct: 245 KEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNAL 304
Query: 155 IDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQ 214
IDMY KCG + A +F+ + +RD +WT+M+ G +EA+ +F +M + P++
Sbjct: 305 IDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDE 364
Query: 215 FTYNAIIASYARRGDSNAAFAFFSRMTA-EGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
TY ++++ G + FF+ MTA G P++ + M+ ++ EA ++ K
Sbjct: 365 VTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIK 424
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR--EIHALVCRMGLHIDVFTGSALI---DM 328
M +KPN++ G L G+ +I + E+ L ++ G+ + ++
Sbjct: 425 NM---PMKPNSIV------WGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNI 475
Query: 329 YSKCGSLKDARTLFEI 344
Y+ C R L ++
Sbjct: 476 YAACNKWDKLRELRQV 491
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 5/198 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C + AL G+ + + N + N + + L+ +Y CG+V A +F+ +P +
Sbjct: 269 VLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRD 328
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
F MV+ A G +EA+ FS M + ++ T+ VL AC + +GK+ A
Sbjct: 329 KFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFA 388
Query: 138 VAT-QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKV 195
T + G E +++ ++D+ K G L A + M + + + W +++ G C + K
Sbjct: 389 SMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALL-GACRIHKD 447
Query: 196 DEAVVLFERMKLEGLEPN 213
E LE LEPN
Sbjct: 448 AEMAERAIEQILE-LEPN 464
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/532 (30%), Positives = 263/532 (49%), Gaps = 76/532 (14%)
Query: 69 VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD 128
VF+ I PN+ + N M+ A + + A+ + M + N ++F +LK+C
Sbjct: 20 VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL-----------------C------ 165
++G+Q+HA ++G D V +LI MY++ G L C
Sbjct: 80 FEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITG 139
Query: 166 --------SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
SAR+VF + ERDVVSW +MI+GY + +EA+ LF+ M + P++ T
Sbjct: 140 YASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTL 199
Query: 218 ---------------------------------------NAIIASYARRGDSNAAFAFFS 238
NA+I Y++ GD AF F
Sbjct: 200 VSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFE 259
Query: 239 RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
++ + D+V+WN +I G+ + EAL LF+ ML SG PN+VT+ VL A G
Sbjct: 260 GLSCK----DVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLG 315
Query: 299 SIQIGREIHALVCR--MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
+I IGR IH + + G+ + ++LIDMY+KCG ++ A +F ++++SWNAM
Sbjct: 316 AIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAM 375
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I + HG +++ +LF RM + +++T + +LSACSH GL++ G +IF+SM + Y
Sbjct: 376 IFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYN 435
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
+ EHY C++D+L SG EA +++ +PM + + C HG +LA +
Sbjct: 436 LTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFA 495
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
++ ++ +V+LSNI A G W + +R ++ K ++K PG S +E
Sbjct: 496 QKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIE 547
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 194/435 (44%), Gaps = 79/435 (18%)
Query: 19 LLGKCMKSKALRQGKQVHA----LLCTND----LNIFSLKSK------------------ 52
LL C KSKA +G+Q+HA L C D ++ S+ ++
Sbjct: 70 LLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRD 129
Query: 53 ------LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE 106
L+ YA GD SAR VFD+I +V N M+ G ++EA+ F M
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR 189
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHA----VATQMGFENDVSVGNALIDMYSKCG 162
R ++ T V+ AC I+ G+QVH+ GF + + + NALID+YSKCG
Sbjct: 190 TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----- 217
+ +A +F G+ +DVVSW ++I GY + + EA++LF+ M G PN T
Sbjct: 250 DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLP 309
Query: 218 --------------------------------NAIIASYARRGDSNAAFAFFSRMTAEGF 245
++I YA+ GD AA F+ M
Sbjct: 310 ACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSM----L 365
Query: 246 VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGRE 305
L +WNAMI GFA R N A LF M + ++P+++T G+L A +G + +GR+
Sbjct: 366 YRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQ 425
Query: 306 I-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK-NVASWNAMIGCYGKH 363
I ++ L + +ID+ G K+A + ++ + W +++ KH
Sbjct: 426 IFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKH 485
Query: 364 GMVDSSIELFERMLE 378
G ++ + +++++
Sbjct: 486 GNLELAESFAQKLIK 500
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/603 (28%), Positives = 284/603 (47%), Gaps = 86/603 (14%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSK------LVGVYAGCGDVNSA 66
+ + D + M S +G+ AL C +D+ + +K ++ YA G A
Sbjct: 251 IEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEA 310
Query: 67 RLVFDKIP-----NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLK 121
F ++ PNV ++ S G EA+ F M + N T + +
Sbjct: 311 SKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVS 370
Query: 122 ACVGLLDIKKGKQVHAVATQMG-FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVV 180
AC L ++ G+++H ++ ++D+ VGN+L+D Y+KC + ARR F + + D+V
Sbjct: 371 ACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLV 430
Query: 181 SWTSMISGYCNVSKVDEAVVL-----------------------------------FERM 205
SW +M++GY +EA+ L F+RM
Sbjct: 431 SWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM 490
Query: 206 KLEGLEPNQFTYN-----------------------------------AIIASYARRGDS 230
G++PN T + A+I+ Y+
Sbjct: 491 HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSL 550
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
A + FS ++ D+V WN++IS AQS R AL L + M +S ++ N VT+
Sbjct: 551 EVACSVFSELSTR----DVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSA 606
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A +++ G+EIH + R GL F ++LIDMY +CGS++ +R +F++ +++
Sbjct: 607 LPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDL 666
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SWN MI YG HG ++ LF+ G++ N +T ++LSACSH GL+E+G + F+
Sbjct: 667 VSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKM 726
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
MK Y + + E YAC+VD+L R+G+ E + + ++P ++ G+ C IH D
Sbjct: 727 MKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPD 786
Query: 471 LAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
LA FE+ + +V+++NI +A G W +A +R +MKE+ V K PG S +E +
Sbjct: 787 LAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVK 846
Query: 531 NEF 533
+
Sbjct: 847 RKL 849
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 160/511 (31%), Positives = 264/511 (51%), Gaps = 18/511 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L KC K LR G QVHA L N +++ L S+L+ VY G V AR +FDK+ N
Sbjct: 95 ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154
Query: 78 VFMLNWMVMASAFTG--NFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
VF +W + + G +++E I F LM R + F F V KAC L + + GK V
Sbjct: 155 VF--SWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
+ +GFE + V +++DM+ KCG + ARR F + +DV W M+SGY + +
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTA-EGFVPDLVTWNA 254
+A+ MKL G++P+Q T+NAII+ YA+ G A +F M + F P++V+W A
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTA 332
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM- 313
+I+G Q+ + EAL +F+ M++ G+KPN++T+ + A ++ GREIH ++
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 392
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
L D+ G++L+D Y+KC S++ AR F + + ++ SWNAM+ Y G + +IEL
Sbjct: 393 ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELL 452
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMK----ERYGVKISKEHYACVVD 429
M +G+ + +T +++ + G + LE F+ M + IS AC
Sbjct: 453 SEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQV 512
Query: 430 MLCRSGRMVEAYDLLRQVPMYV-TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD 488
+ G+ + Y L + + S + +GC+ ++A ++ F E+ R
Sbjct: 513 RNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCD---SLEVACSV---FSELSTRDVV 566
Query: 489 GFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ + + CA G A +L + M NV+
Sbjct: 567 VWNSIISACAQSGRSVNALDLLREMNLSNVE 597
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 151/297 (50%), Gaps = 9/297 (3%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
++ +L+ C L +++ G QVHA G + +G+ L+++Y + G + ARR+F M
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
ER+V SWT+++ YC + +E + LF M EG+ P+ F + + + + +
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
+ M + GF + +++ F + R + A + F+ + + N+ V+G G
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRIK----NV 350
+++ ++ G+ D T +A+I Y++ G ++A F E+ +K NV
Sbjct: 272 FKKALKCISDMKL----SGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNV 327
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
SW A+I ++G ++ +F +M+ EG++ N +T+ S +SAC++ L+ G EI
Sbjct: 328 VSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 384
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 173/567 (30%), Positives = 278/567 (49%), Gaps = 88/567 (15%)
Query: 6 FPINNLSVNYLDC-LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVN 64
FP+ + Y+ +LGK + L G Q H + ++L+G+YA G +
Sbjct: 45 FPLVIRACAYMGSFILGKTIHGHVLEMGFQSH----------LHVGNELIGMYAKLGRMR 94
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAF---------------------------------- 90
AR +FD++ + N MV A AF
Sbjct: 95 DARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYA 154
Query: 91 -TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
+G +EA+ F LMR + ++V+ C L + K +H A + GFE
Sbjct: 155 RSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSF 214
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
V +ALI +Y K G + A +F M + + SW
Sbjct: 215 VKSALICVYGKHGDVNGAWNLFLEMKNKSLASW--------------------------- 247
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEG----FVPDLVTWNAMISGFAQSKRE 265
NA+I S+A G + A FS++ G P++V+W+A+I GFA RE
Sbjct: 248 --------NALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGRE 299
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
EAL+LF+ M + I N VT++ VL ++ +GREIH V R + ++ G+ L
Sbjct: 300 KEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGL 359
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
++MY+KCG LK+ +FE T K++ SWN+MI YG HG+ +++E F++M++ G + +
Sbjct: 360 VNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDG 419
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
VT ++VLS+CSH GLV +G +F M ++Y ++ EHYAC+VD+L R+G + EA ++++
Sbjct: 420 VTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVK 479
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG-FVMLSNICAADGEWH 504
+P+ + GA N C +H ++A F + R+ G +++LSNI AA G W
Sbjct: 480 NMPVAPNACVWGALLNSCRMHNNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASGRWE 539
Query: 505 EAENLRKIMKEKNVQKQPGFS--RVEK 529
++ +R K K ++K PG S +VEK
Sbjct: 540 DSARVRTSAKTKGLKKNPGQSWIKVEK 566
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 210/462 (45%), Gaps = 84/462 (18%)
Query: 104 MREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
MR+ + FTF +V++AC + GK +H +MGF++ + VGN LI MY+K G
Sbjct: 33 MRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGR 92
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
+ AR +F M R +SW +M+S Y + A+ +F+RM+ EG+EPN T+ ++I+S
Sbjct: 93 MRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISS 152
Query: 224 YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
YAR G W+ EA++LF M + G++ +
Sbjct: 153 YARSG-----------------------WH------------EEAMELFGLMRMKGVEVS 177
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+ V+ G+ + IH + G F SALI +Y K G + A LF
Sbjct: 178 GEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFL 237
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG----MRANEVTLISVLSACSHGG 399
+ K++ASWNA+I + + G+ D ++E+F ++ G +R N V+ +++ + G
Sbjct: 238 EMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKG 297
Query: 400 LVEKGLEIFRSMK-------------------ERYGVKISKEHYACV------------- 427
++ LE+FR M+ E + + +E + V
Sbjct: 298 REKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGN 357
Query: 428 --VDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM 482
V+M + G + E + + + + NSM G +HG A+ ++ ++
Sbjct: 358 GLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMI----TGYGMHGLGMNALETFDQMIKL 413
Query: 483 GLRKPDG--FVMLSNICAADGEWHEAENL-RKIMKEKNVQKQ 521
G KPDG FV + + C+ G HE L +++K+ ++ Q
Sbjct: 414 GF-KPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQ 454
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/421 (36%), Positives = 221/421 (52%), Gaps = 43/421 (10%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+ FT VLK+C L + G+ VH ++G E D VG +LIDMY KCG++ AR++F
Sbjct: 106 DNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLF 165
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M RD+ SW NA+IA Y + G+
Sbjct: 166 DKMIVRDMASW-----------------------------------NALIAGYMKEGEIG 190
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG--IKPNNVTVTG 289
A F RM ++V+W AMISG+ Q+ +AL LF ML G +KPN VT+
Sbjct: 191 VAEDLFERMEHR----NIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVS 246
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI-- 347
VL A + +++ GR IH +GLH++ +AL MY+KC SL +AR F++
Sbjct: 247 VLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNG 306
Query: 348 KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
KN+ +WN MI Y HG ++ +FE ML G++ + VT + +LS CSH GL++ GL
Sbjct: 307 KNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNH 366
Query: 408 FRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHG 467
F M + V+ EHYACVVD+L R+GR+VEA +L+ Q+PM S+ GA C H
Sbjct: 367 FNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHR 426
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
++A F + +V+LSN+ A G W E + LR ++K + ++K PG S +
Sbjct: 427 NLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWI 486
Query: 528 E 528
E
Sbjct: 487 E 487
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 48/274 (17%)
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L+ + M G+ +N T+ VL++ + +GR +H R+GL D + G++LIDM
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFER------------- 375
Y KCG + DAR LF+ ++++ASWNA+I Y K G + + +LFER
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 376 ------------------MLEEG--MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
ML++G M+ N VT++SVL AC+ +E+G I
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRI-HDFANGI 270
Query: 416 GVKISKEHYACVVDMLCRSGRMVEA---YDLLRQ--VPMYVTNSMAGAF-RNGCNIHGRR 469
G+ ++ + M + +VEA +D++ Q + N+M A+ +GC +
Sbjct: 271 GLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVE--- 327
Query: 470 DLAVTMGEEFFEMGLRKPDG--FVMLSNICAADG 501
AV++ E G+ +PD F+ L + C+ G
Sbjct: 328 --AVSIFENMLRAGV-QPDAVTFMGLLSGCSHSG 358
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 46/292 (15%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI------ 73
+G+C+ + LR G + F + + L+ +Y CG + AR +FDK+
Sbjct: 125 MGRCVHGQGLRVGLE----------GDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMA 174
Query: 74 ----------------PNPNVF-------MLNWMVMASAFTGN--FQEAIGYFSLMRE-- 106
++F +++W M S +T N ++A+G F M +
Sbjct: 175 SWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDG 234
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
+ N T VL AC +++G+++H A +G + SV AL MY+KC L
Sbjct: 235 SEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVE 294
Query: 167 ARRVFHGMFE--RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASY 224
AR F + + +++++W +MI+ Y + EAV +FE M G++P+ T+ +++
Sbjct: 295 ARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGC 354
Query: 225 ARRGDSNAAFAFFSRM-TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
+ G +A F+ M T P + + ++ ++ R EA +L M
Sbjct: 355 SHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQM 406
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 10/217 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPN-- 75
+L C +S AL +G+++H L++ S+++ L G+YA C + AR FD I
Sbjct: 247 VLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNG 306
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGK 133
N+ N M+ A A G EA+ F M + + TF +L C GL+D
Sbjct: 307 KNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGL-N 365
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+ + T E V ++D+ + G L A+ + M + W ++++ C
Sbjct: 366 HFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAA-CRS 424
Query: 193 SKVDEAVVLFERMKLEGLEP-NQFTYNAIIASYARRG 228
+ E L R +L LEP N Y + YA G
Sbjct: 425 HRNLEIAELAAR-RLFVLEPDNSGNYVLLSNLYAEAG 460
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/485 (32%), Positives = 257/485 (52%), Gaps = 30/485 (6%)
Query: 62 DVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIG---YFSLMREFIYRCNKFTFSI 118
D++ A +F+++P N F N ++ + + + I ++ +M + N+FTF
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH-GMFER 177
VLKAC I++GKQ+H +A + GF D V + L+ MY CG + AR +F+ + E+
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 178 DVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFF 237
D+V T + K D +VL +N +I Y R GD AA F
Sbjct: 194 DMVVMT-------DRRKRDGEIVL---------------WNVMIDGYMRLGDCKAARMLF 231
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+M +V+WN MISG++ + +A+++F+ M I+PN VT+ VL A
Sbjct: 232 DKMRQRS----VVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRL 287
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
GS+++G +H G+ ID GSALIDMYSKCG ++ A +FE +NV +W+AMI
Sbjct: 288 GSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMI 347
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
+ HG +I+ F +M + G+R ++V I++L+ACSHGGLVE+G F M G+
Sbjct: 348 NGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGL 407
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
+ EHY C+VD+L RSG + EA + + +P+ + + A C + G ++ +
Sbjct: 408 EPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVAN 467
Query: 478 EFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVEKE 537
+M +V LSN+ A+ G W E +R MKEK+++K PG S ++ E
Sbjct: 468 ILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFV 527
Query: 538 VQNES 542
V+++S
Sbjct: 528 VEDDS 532
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 146/283 (51%), Gaps = 5/283 (1%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCN 112
++ Y GD +AR++FDK+ +V N M+ + G F++A+ F M++ R N
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 273
Query: 113 KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFH 172
T VL A L ++ G+ +H A G D +G+ALIDMYSKCG++ A VF
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFE 333
Query: 173 GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA 232
+ +V++W++MI+G+ + +A+ F +M+ G+ P+ Y ++ + + G
Sbjct: 334 RLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEE 393
Query: 233 AFAFFSRM-TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
+FS+M + +G P + + M+ +S +EA + M IKP++V +L
Sbjct: 394 GRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM---PIKPDDVIWKALL 450
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
A + G++++G+ + ++ M H D AL +MY+ G+
Sbjct: 451 GACRMQGNVEMGKRVANILMDMVPH-DSGAYVALSNMYASQGN 492
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 99/235 (42%), Gaps = 7/235 (2%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
L S L+ +Y+ CG + A VF+++P NV + M+ A G +AI F MR+
Sbjct: 311 LGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG 370
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM-GFENDVSVGNALIDMYSKCGLLCSA 167
R + + +L AC +++G++ + + G E + ++D+ + GLL A
Sbjct: 371 VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEA 430
Query: 168 RRVFHGM-FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
M + D V W +++ G C + E + ++ + + Y A+ YA
Sbjct: 431 EEFILNMPIKPDDVIWKALL-GACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYAS 489
Query: 227 RGDSNAAFAFFSRMTAEGFVPD----LVTWNAMISGFAQSKRENEALKLFKGMLV 277
+G+ + RM + D L+ + ++ F + K MLV
Sbjct: 490 QGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLV 544
>gi|296085749|emb|CBI29560.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 172/556 (30%), Positives = 269/556 (48%), Gaps = 69/556 (12%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSA 66
P + N+ L KC + R+ Q +D N+FS + ++ YA A
Sbjct: 40 PPSTYFSNHFILLYSKCGRLAWARKAFQD-----ISDPNVFSFNA-IIAAYAKESRPLIA 93
Query: 67 RLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGL 126
+FD+IP P++ N ++ A A G A+G FS MRE + FT S V+ AC
Sbjct: 94 HQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCD- 152
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE-RDVVSWTSM 185
D+ Q+H+VA GF++ VSV NAL+ Y K G L A+RVF+GM RD VSW SM
Sbjct: 153 -DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSM 211
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGF 245
I Y + +A+ LF+ M GL + FT +++ ++ D + F ++ GF
Sbjct: 212 IVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGF 271
Query: 246 --------------------------------VPDLVTWNAMISGFAQSKR-ENEALKLF 272
PDLV WN M+SG++Q++ +AL+ F
Sbjct: 272 HQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECF 331
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
+ M G +PN+ + V+ A S G++IH+L +
Sbjct: 332 RQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALK-------------------- 371
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
LF+ N S N+MI Y +HG+ S+ LF+ MLE + +T ISVL
Sbjct: 372 -------RLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVL 424
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT 452
SAC+H G VE+G F MKE++ ++ EHY+C++D+L R+G++ EA +L+ ++P
Sbjct: 425 SACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPG 484
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
+ + C HG +LAV + ++ +V+LSN+ A+ G W E +RK
Sbjct: 485 SIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKF 544
Query: 513 MKEKNVQKQPGFSRVE 528
M+++ V+K+PG S +E
Sbjct: 545 MRDRGVKKKPGCSWIE 560
>gi|15227029|ref|NP_178378.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546778|sp|Q1PFA6.2|PP144_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02750
gi|2947066|gb|AAC05347.1| hypothetical protein [Arabidopsis thaliana]
gi|330250526|gb|AEC05620.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 262/503 (52%), Gaps = 49/503 (9%)
Query: 32 GKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
G Q+H L + + + + LV +Y+ CG+ A +F+K+P+ +V N +
Sbjct: 148 GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 91 TGNFQEAIGYFSLMREFIYR-CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
G F+LMR+F N TF + AC LL+++ G+Q+H + + F+ +
Sbjct: 208 NGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETM 267
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFE-RDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
VG ALIDMYSKC SA VF + + R+++SW
Sbjct: 268 VGTALIDMYSKCRCWKSAYIVFTELKDTRNLISW-------------------------- 301
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
N++I+ G A F ++ +EG PD TWN++ISGF+Q + EA
Sbjct: 302 ---------NSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEA 352
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
K F+ ML + P+ +T +L A +++ G+EIH V + D+F ++LIDM
Sbjct: 353 FKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDM 412
Query: 329 YSKCGSLKDARTLFEI--TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
Y KCG AR +F+ + K+ WN MI YGKHG +S+IE+FE + EE + +
Sbjct: 413 YMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLA 472
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T +VLSACSH G VEKG +IFR M+E YG K S EH C++D+L RSGR+ EA +++ Q
Sbjct: 473 TFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQ 532
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEE----FFEMGLRKPDGFVMLSNICAADGE 502
+ ++S+ + C R+ L +GEE E+ P FV+LS+I AA
Sbjct: 533 M-SEPSSSVYSSLLGSC----RQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALER 587
Query: 503 WHEAENLRKIMKEKNVQKQPGFS 525
W + E++R+++ +K + K PG S
Sbjct: 588 WEDVESIRQVIDQKQLVKLPGLS 610
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 157/334 (47%), Gaps = 38/334 (11%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
NKFTF +LK+C L D+ +G+ +HA + GF DV AL+ MY K + A +V
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------- 217
M ER + S + +SG +A +F ++ G N T
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGM 149
Query: 218 ------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
++++ Y+R G+ A F ++ + +VT+NA ISG
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK----SVVTYNAFISGL 205
Query: 260 AQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
++ N +F M S +PN+VT + A ++Q GR++H LV + +
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 319 VFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
G+ALIDMYSKC K A +F E+ +N+ SWN++I +G ++++ELFE++
Sbjct: 266 TMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLD 325
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
EG++ + T S++S S G V + + F M
Sbjct: 326 SEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 143/312 (45%), Gaps = 43/312 (13%)
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
PN+FT+ ++ S A+ GD +++ GF D+ T A++S + + K+ +ALK+
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 272 FKGMLVSGIKPNNVTVTGVLQAG----------------------------GLTGSIQIG 303
M GI N V+G+L+ G G G I+ G
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG 148
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
++H L + G ++V+ G++L+ MYS+CG A +FE K+V ++NA I ++
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 364 GMVDSSIELFERMLE-EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
G+++ +F M + N+VT ++ ++AC+ ++ G ++ +G+ + KE
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYG-------RQLHGLVMKKE 261
Query: 423 HY------ACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
++DM + AY + ++ + +G I+G+ + AV +
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 477 EEFFEMGLRKPD 488
E+ GL KPD
Sbjct: 322 EKLDSEGL-KPD 332
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
S+ L LL C L+ GK++H + + +IF L S L+ +Y CG + AR +
Sbjct: 367 SLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTS-LIDMYMKCGLSSWARRI 425
Query: 70 FDKI-PNPN--VFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
FD+ P P VF W VM S + G + AI F L+RE + TF+ VL AC
Sbjct: 426 FDRFEPKPKDPVF---WNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACS 482
Query: 125 GLLDIKKGKQV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+++KG Q+ + + G++ +ID+ + G L A+ V M E ++
Sbjct: 483 HCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYS 542
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
S++ G C +D + MKL LEP I++S
Sbjct: 543 SLL-GSCR-QHLDPVLGEEAAMKLAELEPENPAPFVILSS 580
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 269/520 (51%), Gaps = 35/520 (6%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVF 70
+ + + LL C + L +QVHA + L+ + S+ + + + + VF
Sbjct: 72 TTSSISTLLKACTTTSTL---EQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVF 128
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ + +P+ + N + + + + F M+ +KFT+ ++KAC + +K
Sbjct: 129 NGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVK 188
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
+G H A + G DV V +LID+Y KCG + AR+VF M ER+VVSWT+MI+GY
Sbjct: 189 EGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYA 248
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLV 250
+ S + EA LF+ M E N ++NAII+ Y + GD +A F M D+V
Sbjct: 249 SFSDLVEARKLFDEMP----EKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRN--RDVV 302
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
W+A+ISG +KP+ + ++ A GS+++ + + V
Sbjct: 303 AWSALISG--------------------NVKPDEFIMVSLMSACSQMGSLELAKWVDDYV 342
Query: 311 CRMGLHIDVFTG---SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+ IDV +ALIDM +KCGS+ A LFE +++ S+ +M+ HG
Sbjct: 343 RKSS--IDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGP 400
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
++ LF RML EG+ ++V +L+ACS GLV++G F SMK Y + S +HYAC+
Sbjct: 401 QAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACM 460
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
VD+L R+GR+ EAY+LL+ +P+ GA C +H +L + ++ FE+ +
Sbjct: 461 VDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNA 520
Query: 488 DGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRV 527
+V+LSNI AA +W + LR M+E+ ++K PG S +
Sbjct: 521 GNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 560
>gi|297741541|emb|CBI32673.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/523 (30%), Positives = 253/523 (48%), Gaps = 52/523 (9%)
Query: 23 CMKSKA-LRQGKQVHALLCTN------------DLNIFSLKSKLVGVYAGCGDVNSARLV 69
C S A + ++ HAL C L L+ +V Y+ + A +
Sbjct: 289 CPSSDAKFKPQRETHALACNQLKESQRIHGRAIKLGTTILEPDIVCSYSASKALWDACKL 348
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
FD++PN +V + A + +EAI +FS M + N+F+F V+ + L D+
Sbjct: 349 FDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSSTALQDL 408
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
G+Q+HA A +MG E++V VG+A++D Y+K
Sbjct: 409 NSGRQLHACAIKMGLESNVFVGSAVVDFYAK----------------------------- 439
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL 249
++ ++EA FE + EPN +Y +I Y ++ + A A F +M ++
Sbjct: 440 --LTSINEAQKAFE----DTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPER----NV 489
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
V+WNAMISG++Q EA+ LF ML G PN T + A ++ +GR H
Sbjct: 490 VSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERTFPCAISAVANIAALGMGRSFHGS 549
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
+ DVF G++L+ Y+KCGS++++ +F KN+ SWNA+I Y HG +
Sbjct: 550 AVKFLGKFDVFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEA 609
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
I FE+M + G+R N VTL+ +L AC+H GLV+KG F + ++ EH+AC+VD
Sbjct: 610 IYFFEKMQDTGLRPNSVTLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVD 669
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
+L RSGR EA L ++P A GC IH +L + +
Sbjct: 670 LLSRSGRFKEAEKFLHELPFVPGIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSS 729
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+VMLSN +A G W +RK M+EK ++ PG S +E R++
Sbjct: 730 YVMLSNAHSAAGRWQSVSMIRKEMREKRMKGVPGSSWIEIRSK 772
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/553 (29%), Positives = 274/553 (49%), Gaps = 75/553 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C + + GK+VH+ + L+ + + L+ +YA GD+ A++VFD++
Sbjct: 110 LTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMK 169
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE--------FIYRCN-------------- 112
N N M+ G A+ F L+ E I CN
Sbjct: 170 LRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSS 229
Query: 113 ----------KFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
+F+ + L AC L + GKQ+H + F+ +VGNALI MY+K G
Sbjct: 230 ILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSG 289
Query: 163 LLCSARRVFH--GMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAI 220
+ ARR+ G+ + DV+++T++++GY +KL + P + +N++
Sbjct: 290 GVEIARRIIEQSGISDLDVIAFTALLNGY---------------VKLGDITPARQIFNSL 334
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
PD+V W AMI G+ Q+ N+A+++FK M+ G
Sbjct: 335 KD------------------------PDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGP 370
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+PN+ T+ +L A S+ G++IHA R G + G+AL MY+K GS+ AR
Sbjct: 371 RPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARK 430
Query: 341 LFEITRI-KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F + R ++ SW +MI +HG+ + +IELFE+ML G++ + +T + VLSAC+HGG
Sbjct: 431 VFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGG 490
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
LVE+G F MK + + + HYAC+VD+ R+G + EAY + +PM G+
Sbjct: 491 LVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSL 550
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
+ C ++ DLA E + + L+N+ ++ G+W +A +RK+MK + V+
Sbjct: 551 LSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVK 610
Query: 520 KQPGFSRVEKRNE 532
K+ G S V+ +N+
Sbjct: 611 KEQGLSWVQIQNK 623
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 139/489 (28%), Positives = 235/489 (48%), Gaps = 25/489 (5%)
Query: 47 FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMRE 106
FS + L G YA G + A VFD IP + +++ G F++AI F M +
Sbjct: 42 FSWNTILSG-YAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVK 100
Query: 107 FIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
+FT + VL +C GK+VH+ ++G V V N+L++MY+K G L
Sbjct: 101 DKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKM 160
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
A+ VF M R+ SW +MIS + N +VD A+ FE + E + ++N++IA +
Sbjct: 161 AKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLS----ERDIVSWNSMIAGCNQ 216
Query: 227 RGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
G N A FFS + + PD + + +S A ++ + ++ ++ + +
Sbjct: 217 HGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGA 276
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGL-HIDVFTGSALIDMYSKCGSLKDARTLFEI 344
++ +G ++I R I + + G+ +DV +AL++ Y K G + AR +F
Sbjct: 277 VGNALISMYAKSGGVEIARRI---IEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNS 333
Query: 345 TRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKG 404
+ +V +W AMI Y ++G+ + +IE+F+ M+ EG R N TL ++LSA S + G
Sbjct: 334 LKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHG 393
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVT-NSMAGAFR 460
+I S R G +S + M ++G + A ++LLRQ V+ SM A
Sbjct: 394 KQIHASAI-RSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALA 452
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMKEKNV 518
HG + A+ + E+ +G+ KPD +V + + C G + + +M KNV
Sbjct: 453 Q----HGLGEEAIELFEQMLTLGI-KPDHITYVGVLSACTHGGLVEQGRSYFDLM--KNV 505
Query: 519 QK-QPGFSR 526
K P S
Sbjct: 506 HKIDPTLSH 514
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 150/318 (47%), Gaps = 47/318 (14%)
Query: 141 QMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVV 200
++G V + N L+++Y+K G A +F+ M + SW +++SGY K+++A
Sbjct: 3 KLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQ 62
Query: 201 LFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
+F+ + + + ++ II Y + G
Sbjct: 63 VFDLIPVR----DSVSWTTIIVGYNQMG-------------------------------- 86
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
R +A+K+F M+ + P T+T VL + TGS IG+++H+ V ++GLH V
Sbjct: 87 ---RFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVP 143
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
++L++MY+K G LK A+ +F+ +++N +SWNAMI + G VD ++ FE + E
Sbjct: 144 VANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERD 203
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
+ V+ S+++ C+ G + L+ F S+ + +K + A + +E
Sbjct: 204 I----VSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACAN----LEK 255
Query: 441 YDLLRQVPMYVTNSMAGA 458
+Q+ Y+ +M A
Sbjct: 256 LSFGKQIHGYIVRTMFDA 273
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/543 (29%), Positives = 283/543 (52%), Gaps = 52/543 (9%)
Query: 29 LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
++Q KQ+HA + L+ + +K++ + ++ A VF++ P+ F+ N M+ A
Sbjct: 19 IQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRA 78
Query: 88 SAFTGNFQEAIGYFSLMREFIYRC-----NKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
+ + AI ++ MR C +K+T+ V KAC ++KGK+VH V ++
Sbjct: 79 YSSSQTPCVAISIYNKMRA----CQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRI 134
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
G+E D + ++L++ Y CG + +A++VF +DVV W ++I+GY V ++ +F
Sbjct: 135 GYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVF 194
Query: 203 ERM-KLEGLEPNQFTYNAIIAS------------------------------------YA 225
+ M +++ + PN+ T +I + Y
Sbjct: 195 KEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYV 254
Query: 226 RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ G + A F + + + V WN++I G+ Q NE ++L + M +S +KP+
Sbjct: 255 KCGYLDGARKLFDEIPEK----NTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRF 310
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
TV+GVL A G+ +G +H + G+ DVF G+ALIDMY+KCG + AR +F+
Sbjct: 311 TVSGVLSACAQMGAFNLGNWVHRFAEKKGIW-DVFIGTALIDMYAKCGFIGAARKVFDQM 369
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
+NVA+WNA++ Y HG +S+IELF M E G R + +T ++VL AC+H GLVE G
Sbjct: 370 NERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGK 429
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
+ F M + Y + EHY C+VD+L R+G + EA +L++ + + + GA + C+I
Sbjct: 430 QYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSI 489
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
HG ++ ++ +V+L+N+ A+ ++ + +R++M EK + K G S
Sbjct: 490 HGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCS 549
Query: 526 RVE 528
+E
Sbjct: 550 MIE 552
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 150/290 (51%), Gaps = 9/290 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI---FSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
L+ C++SK L+ G+ +H + D+ + L++ L+ +Y CG ++ AR +FD+IP
Sbjct: 213 LIVACIESKNLKLGRAIHGYM-MKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPE 271
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
N + N ++ G+ E I M + ++FT S VL AC + G V
Sbjct: 272 KNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWV 331
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H A + G DV +G ALIDMY+KCG + +AR+VF M ER+V +W +++SGY + +
Sbjct: 332 HRFAEKKGIW-DVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQA 390
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVT-WNA 254
+ A+ LF M+ G P+ T+ A++ + A G +F M +P V +
Sbjct: 391 ESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGC 450
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGR 304
M+ ++ EA +L K M+V +PN V +L A + G+I+IG
Sbjct: 451 MVDLLGRAGLLQEARELIKMMVV---EPNVVVWGALLSACSIHGNIEIGE 497
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/541 (30%), Positives = 277/541 (51%), Gaps = 42/541 (7%)
Query: 34 QVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW--MVMASAF 90
++HALL ++ N+F L YA G +++A P+ + W ++ A +
Sbjct: 33 RLHALLVVSSSQNLFP---SLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSR 89
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
G+ A+ F + R + TF++ L AC L D+ + V A G+ DV V
Sbjct: 90 AGSPGAALRVFRALPSSA-RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFV 148
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
+AL+ +YS+CG + A RVF GM +D V+W++M++G+ + + EA+ ++ RM+ G+
Sbjct: 149 CSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGV 208
Query: 211 EPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL--------------------- 249
++ +I + G++ + R G D+
Sbjct: 209 AEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQ 268
Query: 250 ----------VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
V+WNA+ISGFAQ+ +EAL LF+ M SG++P++ + L A G
Sbjct: 269 VFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGF 328
Query: 300 IQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
+++G+ IH + R L G+A++DMYSKCGSL+ AR LF +++ WNAMI C
Sbjct: 329 LKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIAC 387
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
G HG ++ LF+ + E G++ + T S+LSA SH GLVE+G F M +G++
Sbjct: 388 CGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEP 447
Query: 420 SKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEF 479
+++H CVVD+L RSG + EA ++L + T + A +GC + + +L T+ ++
Sbjct: 448 TEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKI 507
Query: 480 FEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFVEK 536
E ++SN+ AA +W + +RK+MK+ +K PG+S +E R+ FV +
Sbjct: 508 LESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVME 567
Query: 537 E 537
+
Sbjct: 568 D 568
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/560 (29%), Positives = 280/560 (50%), Gaps = 64/560 (11%)
Query: 33 KQVHALLCTNDL-NIFSLKSKLVGVYA-GCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
K++HA L + L N SK++ YA D+ A VF++I +P F+ N ++ A
Sbjct: 328 KKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQ 387
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
+ ++AI ++ +E + + TF VLKAC K+G+Q+H+ ++GF D+ V
Sbjct: 388 SDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFV 447
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
N+LI +Y+ CG L AR +F M +DVVSW S+I GY ++ E + LFE M+ E +
Sbjct: 448 SNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEV 507
Query: 211 EPNQFTY-----------------------------------NAIIASYARRGDSNAAFA 235
+ ++ T N +I Y R G +A
Sbjct: 508 QADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEK 567
Query: 236 FFSRMTAEGFVP---------------------------DLVTWNAMISGFAQSKRENEA 268
FS+M + V DL++W++MI ++Q+ +++
Sbjct: 568 VFSQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDS 627
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L+LF+ M + +KP+ V + VL A G++ +G+ IH V R + D ++LIDM
Sbjct: 628 LELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKTDTIMENSLIDM 687
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
++KCG +++A +F K+ SWN++I +G D ++ +F ML EG R NEVT
Sbjct: 688 FAKCGCMQEALQVFTEMEEKDTLSWNSIILGLANNGFEDEALNIFYSMLTEGPRPNEVTF 747
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+ VL AC++ LV++GL+ F MK + ++ +HY CVV +L R+G++ +A + + ++P
Sbjct: 748 LGVLIACANKRLVQEGLDHFERMKTVHNLEPQMKHYGCVVGILSRAGQLEKAKNFINEMP 807
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
+ + C HG +A ++ E+ +++LSNI A+ W +A N
Sbjct: 808 LAPDPVVWRILLGACKTHGNVAVAEVATKKLSELDPSNSGDYMLLSNIYASADRWSDALN 867
Query: 509 LRKIMKEKNVQKQPGFSRVE 528
+R+ M + V+K P S V+
Sbjct: 868 VRQWMADTAVRKSPACSVVD 887
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 181/324 (55%), Gaps = 13/324 (4%)
Query: 213 NQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLF 272
N ++N +I +A G+ A F +M ++V+W +I G+ ++ EA+ LF
Sbjct: 5 NVVSWNVVITGFAGWGEIEYARLLFDQMPCR----NVVSWTGLIDGYTRACLYAEAVALF 60
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
+ M+ GI P+ +TV V+ A G I +G +H + G+ D G++LID+Y+K
Sbjct: 61 RHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKI 120
Query: 333 GSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISV 391
GS++++ +F E+ +N+ SW ++I + HG+ ++ELF M G+R N +T +SV
Sbjct: 121 GSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSV 180
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYV 451
++ACSHGGLVE+GL F+SM Y + +H+ C++DML R+GR+ EA ++ +P+ V
Sbjct: 181 INACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEV 240
Query: 452 TNSMAGAFRNGCNIHGRRDLAVTMGEEFFEM--GLRKPDG--FVMLSNICAADGEWHEAE 507
+ C+ +G V MG+ +M L + G F +LSN+ G + +AE
Sbjct: 241 NVIVWRILLGCCSKYGE----VEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAE 296
Query: 508 NLRKIMKEKNVQKQPGFSRVEKRN 531
RK++ E+ + K PG + V R+
Sbjct: 297 QARKLLDERKIVKVPGLALVVTRS 320
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 204/424 (48%), Gaps = 36/424 (8%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN--DVSVGNALIDMYSKCGLLCSARR 169
N + I+L C +++ GK+ + + + E+ D +V L ++ ++ G A +
Sbjct: 241 NVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAV---LSNVLNELGRFSDAEQ 297
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK-------LEGLEPNQFTYNAIIA 222
+ ER +V + G V V + V+ E +K + GL Q+ + +I
Sbjct: 298 ARKLLDERKIVK----VPGLALV--VTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIR 351
Query: 223 SYA-RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
SYA ++ D A F ++ + P WN ++ G AQS +A+ +K G+K
Sbjct: 352 SYALQQSDLVFAHKVFEQIES----PTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMK 407
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+N+T VL+A T + + G ++H+ V ++G +D+F ++LI +Y+ CG L AR++
Sbjct: 408 PDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSI 467
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ +K+V SWN++IG Y + + LFE M E ++A++VT++ V+SAC+H G
Sbjct: 468 FDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDW 527
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGA 458
+ R + ER +++ ++D CR G++ A + Q+ N+M A
Sbjct: 528 SMADCMVRYI-ERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHA 586
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
+ G N+ ++ F+ + D S ICA H +++L + +
Sbjct: 587 YAKGGNL--------VSAKKIFDQ-IPNKDLISWSSMICAYSQASHFSDSLELFRQMQRA 637
Query: 519 QKQP 522
+ +P
Sbjct: 638 KVKP 641
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 126/237 (53%), Gaps = 7/237 (2%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFS 102
N+ S + G +AG G++ ARL+FD++P NV ++W + +T + EA+ F
Sbjct: 5 NVVSWNVVITG-FAGWGEIEYARLLFDQMPCRNV--VSWTGLIDGYTRACLYAEAVALFR 61
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M ++ T V+ A L I G+ +H + G +D VGN+LID+Y+K G
Sbjct: 62 HMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIG 121
Query: 163 LLCSARRVFHGMFE-RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII 221
+ ++ +VF M + R++VSWTS+ISG+ EA+ LF M+ G+ PN+ T+ ++I
Sbjct: 122 SVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVI 181
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
+ + G AFF M E + P++ + +I ++ R EA ++ +G+ V
Sbjct: 182 NACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPV 238
>gi|116830405|gb|ABK28160.1| unknown [Arabidopsis thaliana]
Length = 614
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 173/516 (33%), Positives = 267/516 (51%), Gaps = 52/516 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+LG C + G Q+H L + + + + LV +Y+ CG+ A +F+K+P+ +
Sbjct: 138 VLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKS 194
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR-CNKFTFSIVLKACVGLLDIKKGKQVH 136
V N + G F+LMR+F N TF + AC LL+++ G+Q+H
Sbjct: 195 VVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLH 254
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFE-RDVVSWTSMISGYCNVSKV 195
+ + F+ + VG ALIDMYSKC SA VF + + R+++SW
Sbjct: 255 GLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISW------------- 301
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAM 255
N++I+ G A F ++ +EG PD TWN++
Sbjct: 302 ----------------------NSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSL 339
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
ISGF+Q + EA K F+ ML + P+ +T +L A +++ G+EIH V +
Sbjct: 340 ISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAA 399
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEI--TRIKNVASWNAMIGCYGKHGMVDSSIELF 373
D+F ++LIDMY KCG AR +F+ + K+ WN MI YGKHG +S+IE+F
Sbjct: 400 ERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIF 459
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
E + EE + + T +VLSACSH G VEKG +IFR M+E YG K S EH C++D+L R
Sbjct: 460 ELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGR 519
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEE----FFEMGLRKPDG 489
SGR+ EA +++ Q+ ++S+ + C R+ L +GEE E+ P
Sbjct: 520 SGRLREAKEVIDQM-SEPSSSVYSSLLGSC----RQHLDPVLGEEAAMKLAELEPENPAP 574
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
FV+LS+I AA W + E++R+++ +K + K PG S
Sbjct: 575 FVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 157/334 (47%), Gaps = 38/334 (11%)
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
NKFTF +LK+C L D+ +G+ +HA + GF DV AL+ MY K + A +V
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY-------------- 217
M ER + S + +SG +A +F ++ G N T
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGM 149
Query: 218 ------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
++++ Y+R G+ A F ++ + +VT+NA ISG
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK----SVVTYNAFISGL 205
Query: 260 AQSKRENEALKLFKGML-VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
++ N +F M S +PN+VT + A ++Q GR++H LV + +
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 319 VFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERML 377
G+ALIDMYSKC K A +F E+ +N+ SWN++I +G ++++ELFE++
Sbjct: 266 TMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLD 325
Query: 378 EEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
EG++ + T S++S S G V + + F M
Sbjct: 326 SEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 143/312 (45%), Gaps = 43/312 (13%)
Query: 212 PNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKL 271
PN+FT+ ++ S A+ GD +++ GF D+ T A++S + + K+ +ALK+
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 272 FKGMLVSGIKPNNVTVTGVLQAG----------------------------GLTGSIQIG 303
M GI N V+G+L+ G G G I+ G
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG 148
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
++H L + G ++V+ G++L+ MYS+CG A +FE K+V ++NA I ++
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 364 GMVDSSIELFERMLE-EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
G+++ +F M + N+VT ++ ++AC+ ++ G ++ +G+ + KE
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYG-------RQLHGLVMKKE 261
Query: 423 HY------ACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
++DM + AY + ++ + +G I+G+ + AV +
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 477 EEFFEMGLRKPD 488
E+ GL KPD
Sbjct: 322 EKLDSEGL-KPD 332
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
S+ L LL C L+ GK++H + + +IF L S L+ +Y CG + AR +
Sbjct: 367 SLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTS-LIDMYMKCGLSSWARRI 425
Query: 70 FDKI-PNPN--VFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
FD+ P P VF W VM S + G + AI F L+RE + TF+ VL AC
Sbjct: 426 FDRFEPKPKDPVF---WNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACS 482
Query: 125 GLLDIKKGKQV-HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+++KG Q+ + + G++ +ID+ + G L A+ V M E ++
Sbjct: 483 HCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYS 542
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
S++ G C +D + MKL LEP I++S
Sbjct: 543 SLL-GSCR-QHLDPVLGEEAAMKLAELEPENPAPFVILSS 580
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 181/605 (29%), Positives = 296/605 (48%), Gaps = 102/605 (16%)
Query: 19 LLGKCMKS-KALRQGKQVHALL------CTNDLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
L+ K +K ++L+ +HA L ++DL + +KL+ +Y+ G V+ A +FD
Sbjct: 5 LISKLLKQCRSLKTLTTIHAHLLISGSIASSDLTL----NKLLRLYSKFGAVSYAHKLFD 60
Query: 72 KIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLD 128
+ P PN F+ W + FT N ++ A +F M RE I N FT + VLKA L
Sbjct: 61 ETPEPNSFL--WTALIHGFTENNQYENAFAFFIKMHRENIVPLN-FTIASVLKAVSRLGR 117
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD---------- 178
IK G V+ +A + G+E D+ V N +I+++ +CG + SAR++F M ERD
Sbjct: 118 IKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITG 177
Query: 179 ---------------------VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEP----- 212
V+SWTSMI GY + EA VLFERM + L
Sbjct: 178 YGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMV 237
Query: 213 -------------NQF---------TYNAIIASYARRGDSNAAFAFFSRMTA-------- 242
N F T+N +I+ + G+ +AA FF RM
Sbjct: 238 SAYMSVGNLVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVM 297
Query: 243 --EGFVP-----------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+G++ +LV W+ MI G+A++ +LKL+K GIKP+
Sbjct: 298 IIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPD 357
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
G++ A G + L ++ ++LIDMY+KCG+++ A +FE
Sbjct: 358 ETFALGIISACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFE 417
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ K++ ++ +I + HG+ + +I LF M + ++ + V + VL+AC+HGGLV +
Sbjct: 418 MVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGE 477
Query: 404 GLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
G +FR M + YG++ S++HYAC+VD+L R+G + EA+ L+ +P+ ++ GA + C
Sbjct: 478 GRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATVWGALLSAC 537
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPG 523
+H LA E F++ +V+L NI A G+W + +R +++E V+K G
Sbjct: 538 RVHLNVQLAEAAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKNRG 597
Query: 524 FSRVE 528
S +E
Sbjct: 598 SSWIE 602
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 238/447 (53%), Gaps = 40/447 (8%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+ + AC+ + +G+QVHA + V +G L+ MY +CG L AR V M
Sbjct: 45 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------ 223
ER VVSWT+MISGY + EA+ LF +M G PN++T ++ S
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 164
Query: 224 -----------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
YA+ + A F + D+V+ A+ISG+A
Sbjct: 165 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPER----DVVSCTAIISGYA 220
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q + EAL LF+ + G++ N+VT T ++ A S+ G+++HAL+ R L V
Sbjct: 221 QKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVA 280
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
++LIDMYSKCG L +R +F+ ++V SWNAM+ YG+HG+ I LF+ + +E
Sbjct: 281 LQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE- 339
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++ + VTL++VLS CSHGGLV++GL+IF ++ + + HY C++D+L RSGR+ +A
Sbjct: 340 VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKA 399
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
+L+ +P T S+ G+ C +H + + ++ EM +V+LSNI AA
Sbjct: 400 LNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAA 459
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRV 527
G W + +RK+M EK V K+PG S +
Sbjct: 460 GMWKDVFKVRKLMLEKTVTKEPGQSWI 486
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 196/395 (49%), Gaps = 45/395 (11%)
Query: 23 CMKSKALRQGKQVHALLCTNDLN--IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
C++ +AL +G+QVHA + T +F L ++LV +Y CG ++ AR V D++P +V
Sbjct: 52 CIERRALWEGRQVHARMITARYRPAVF-LGTRLVTMYVRCGALDDARNVLDRMPERSV-- 108
Query: 81 LNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
++W M S + T EA+ F M N++T + VL +C G I +GKQVH++
Sbjct: 109 VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 168
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ FE+ + VG++L+DMY+K + ARRVF + ERDVVS T++ISGY +EA
Sbjct: 169 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 228
Query: 199 VVLFERMKLEGLEPNQFTYNAIIAS--------YARRGD--------------------- 229
+ LF ++ EG++ N T+ ++ + Y ++
Sbjct: 229 LDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDM 288
Query: 230 -SNAAFAFFSRMTAEGFVP-DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
S +SR + + +V+WNAM+ G+ + +E + LFK L +KP++VT+
Sbjct: 289 YSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVKPDSVTL 347
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMG---LHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
VL G + G +I V + LH + +ID+ + G L+ A L E
Sbjct: 348 LAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY--GCIIDLLGRSGRLEKALNLIEN 405
Query: 345 TRIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLE 378
++ S W +++G H V + +++LE
Sbjct: 406 MPFESTPSIWGSLLGACRVHANVHVGELVAQKLLE 440
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 134/262 (51%), Gaps = 3/262 (1%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C +++ QGKQVH+LL TN + + S L+ +YA ++ AR VFD +P
Sbjct: 146 LATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 205
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+V ++ A G +EA+ F + +CN TF+ ++ A GL + GKQ
Sbjct: 206 ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQ 265
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VHA+ + V++ N+LIDMYSKCG L +RRVF M ER VVSW +M+ GY
Sbjct: 266 VHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGL 325
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWN 253
E + LF+ + E ++P+ T A+++ + G + F + E + +
Sbjct: 326 GHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYG 384
Query: 254 AMISGFAQSKRENEALKLFKGM 275
+I +S R +AL L + M
Sbjct: 385 CIIDLLGRSGRLEKALNLIENM 406
>gi|414872719|tpg|DAA51276.1| TPA: methyltransferase small domain protein [Zea mays]
Length = 601
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/500 (32%), Positives = 262/500 (52%), Gaps = 42/500 (8%)
Query: 29 LRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L G+QVHA + + L+ L++ L+ +Y GDV +A L+F + N M+
Sbjct: 137 LSAGRQVHAHVVVSGLHSRVYLRNSLIKMYIDAGDVETAELMFRSALVLDTVSCNIMLSG 196
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
G +A+ +F M +++T +L C L + G+ VH V + D
Sbjct: 197 YVNEGCTLKALWFFRDMASRGIVVDQYTAVALLTCCGRLKNELIGRSVHGVIVRRMDAGD 256
Query: 148 --VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+ + NAL+DMY+KCG + +A+ +F E+D +SW +M+SG+ N +D A
Sbjct: 257 HGLILVNALLDMYAKCGRMNAAKTIFGETGEKDAISWNTMVSGFVNAGMLDLA------- 309
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
SR +E DL++WNA+++G+A+ K
Sbjct: 310 --------------------------------SRFFSEAPSRDLISWNALLAGYARYKSF 337
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
NE +KLF M+ S + + VT ++ A GS+ + +H V + H D F SAL
Sbjct: 338 NEVMKLFHDMVASCVNLDKVTAVTLISAATGKGSLNHAKSVHGWVVKEFDHQDAFLASAL 397
Query: 326 IDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANE 385
+DMY KCG++K A +FE K+V W AMI +G ++ELF +M E + N
Sbjct: 398 VDMYCKCGNVKTAYYVFEKALDKDVTLWTAMISGLAFNGHGTEALELFCKMQTEVVAPNG 457
Query: 386 VTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLR 445
VTL++VLSACSH GL+++G +IF +MK+RY ++ EH+ C+VD+L RSGR+++A L R
Sbjct: 458 VTLLAVLSACSHSGLLDEGCKIFDAMKQRYSIEPGIEHFGCMVDLLARSGRLIDALALAR 517
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHE 505
++PM + S+ G+ N ++A +E + + G+V+LSN+ AA G W+
Sbjct: 518 RMPMRPSRSIWGSILNASLAGQNIEVAEIASKELLRLDPAEEGGYVLLSNLHAAGGHWNH 577
Query: 506 AENLRKIMKEKNVQKQPGFS 525
++ +R+IM+ K ++K G S
Sbjct: 578 SDKVRQIMERKGLRKLAGAS 597
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 10/193 (5%)
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
+ +E ++ + AI+ S R + A F T P+L +N M+S A
Sbjct: 48 LAMETFPMSRLLHYAIVVSSPRL--TREAELLFQHFTPR---PNLYIYNLMLSAAAARDS 102
Query: 265 E--NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTG 322
+A L++ ML S + P+ T +L++ + GR++HA V GLH V+
Sbjct: 103 SSSTQAAALYRSMLASSVLPDQQTFLALLRS---VERLSAGRQVHAHVVVSGLHSRVYLR 159
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
++LI MY G ++ A +F + + S N M+ Y G ++ F M G+
Sbjct: 160 NSLIKMYIDAGDVETAELMFRSALVLDTVSCNIMLSGYVNEGCTLKALWFFRDMASRGIV 219
Query: 383 ANEVTLISVLSAC 395
++ T +++L+ C
Sbjct: 220 VDQYTAVALLTCC 232
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 28 ALRQGKQVHALLCTN-DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
+L K VH + D L S LV +Y CG+V +A VF+K + +V + M+
Sbjct: 371 SLNHAKSVHGWVVKEFDHQDAFLASALVDMYCKCGNVKTAYYVFEKALDKDVTLWTAMIS 430
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHAVATQMGF 144
AF G+ EA+ F M+ + N T VL AC GLLD + K A+ +
Sbjct: 431 GLAFNGHGTEALELFCKMQTEVVAPNGVTLLAVLSACSHSGLLD-EGCKIFDAMKQRYSI 489
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVS-WTSMISG 188
E + ++D+ ++ G L A + M R S W S+++
Sbjct: 490 EPGIEHFGCMVDLLARSGRLIDALALARRMPMRPSRSIWGSILNA 534
>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
Length = 1167
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/540 (30%), Positives = 275/540 (50%), Gaps = 45/540 (8%)
Query: 28 ALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
A++ GK+ + L ++ + L+ Y+ CG ++S+ +F K+P N N ++
Sbjct: 641 AIKTGKEFDSXL--------NISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISG 692
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
G+ ++A+ M++ + T ++ C ++ +G +H A + GF D
Sbjct: 693 CVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACD 752
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
VS+ NALI MY CG + + + +F M R +VSW ++I+GY +E + F +M
Sbjct: 753 VSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIX 812
Query: 208 EGLEPNQFTY--------------------------------NAIIASYARRGDSNAAFA 235
EG +PN T ++I+ YAR + N +F
Sbjct: 813 EGQKPNYVTLLNLLPSCXTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENIN-SFI 871
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F M G D+ WNA++S + Q+K E++ F +L + ++P+ +T ++ A
Sbjct: 872 FLFEM---GGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACV 928
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
S+ + + A V + G + +ALID++++CG++ A+ +FE K+ SW+
Sbjct: 929 QLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWST 988
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
MI YG HG ++++ L +M GM+ + +T SVLSACSHGG +++G IF SM E
Sbjct: 989 MINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEE- 1047
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTM 475
GV EHYAC+VD+L R+G++ EAYD + ++P + S+ + C IHG L +
Sbjct: 1048 GVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLXACIIHGNVKLGEKI 1107
Query: 476 GEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
FE+ + +VML NI AA G W +A +R M+E+ ++K PGFS VE VE
Sbjct: 1108 CSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLVEGNRYPVE 1167
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 181/448 (40%), Gaps = 101/448 (22%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+++ LV YA G + ARLV DKI P++ N ++ + G +E + E
Sbjct: 382 IQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQILEMG 441
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ N TF+ ++ C + + GK +H + GF +D + ALI MY+ G L AR
Sbjct: 442 LKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIAR 501
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
+F E++VV W SMIS Y K EA +F++M ++PN T+
Sbjct: 502 DLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSA 561
Query: 218 ------------------------NAIIASYARRGDSNAAFAFFSRM------------- 240
A+++ YA+ GD N+A F +M
Sbjct: 562 NFWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSYRDSMISG 621
Query: 241 ----------------------TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
T + F L NA+++ ++ + + + KLF+ M +
Sbjct: 622 YGIMSMGRPFFWVRLLMHLAIKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLR 681
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQI-------------------------------GREIH 307
N ++G + G ++ + G +H
Sbjct: 682 NAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLH 741
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+ G DV +ALI MY CG + + LFE+ +++ SWNA+I Y H + +
Sbjct: 742 GYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQN 801
Query: 368 SSIELFERMLEEGMRANEVTLISVLSAC 395
+ F +M+ EG + N VTL+++L +C
Sbjct: 802 EVMASFCQMIXEGQKPNYVTLLNLLPSC 829
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/515 (24%), Positives = 222/515 (43%), Gaps = 83/515 (16%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C S GK +HA + L+ S+ + L+ +YA GD NSA +F ++P
Sbjct: 557 CENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPR------ 610
Query: 82 NWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQ 141
+++ + G S+ R F F +++ L IK GK+
Sbjct: 611 -----KTSYRDSMISGYGIMSMGRPF------FWVRLLMH-----LAIKTGKE------- 647
Query: 142 MGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVL 201
F++ +++ NAL+ YS CG L S+ ++F M R+ +SW ++ISG + +AV L
Sbjct: 648 --FDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVAL 705
Query: 202 FERMKLEGLEPNQFTY-----------------------------------NAIIASYAR 226
+M+ E +E + T NA+I+ Y
Sbjct: 706 LHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVSLVNALISMYFN 765
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVT 286
GD NA F M +V+WNA+I+G+ +NE + F M+ G KPN VT
Sbjct: 766 CGDINAGKFLFEVMPWRS----IVSWNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVT 821
Query: 287 VTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITR 346
+ +L + ++ G+ IHA R G+ ++ ++LI MY++ ++ LFE+
Sbjct: 822 LLNLLPS---CXTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGG 878
Query: 347 IKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLE 406
+++A WNA++ Y + S+ F +L + + +T +S++SAC L
Sbjct: 879 KEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQ----LSSLN 934
Query: 407 IFRSMKERYGVKISKEHYA---CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGC 463
+ S+ K +H ++D+ R G + A + + S + NG
Sbjct: 935 LSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMI-NGY 993
Query: 464 NIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+HG + A+ + + G+ KPDG S + A
Sbjct: 994 GLHGDSEAALALLSQMRLSGM-KPDGITYASVLSA 1027
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 187/418 (44%), Gaps = 80/418 (19%)
Query: 70 FDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDI 129
F+ I P+VF+ N M+ G F++ + + R + FTF V+KAC L +
Sbjct: 302 FEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSALGAV 361
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
+ VH + + FE ++ + AL+D Y+K G + AR V + + D+V+W ++ISGY
Sbjct: 362 WIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGY 421
Query: 190 CNVSKVDEAVVLFERMKLE-GLEPNQFTYNAIIASYARR-----GDSNAAFAFFSRMTAE 243
+++ D+ V R LE GL+PN T+ +II R G S F S +++
Sbjct: 422 -SLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSD 480
Query: 244 GFVP--------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLV 277
F+ ++V WN+MIS +AQ+++ +EA K+F+ ML
Sbjct: 481 EFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLK 540
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
+ ++PN VT ++ + + G+ +HA V + L + +AL+ MY+K G
Sbjct: 541 ANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNS 600
Query: 338 ARTLF-----------------------------------------EITRIKNVASWNAM 356
A +F E N++ NA+
Sbjct: 601 AXFIFYQMPRKTSYRDSMISGYGIMSMGRPFFWVRLLMHLAIKTGKEFDSXLNIS--NAL 658
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
+ Y G + SS +LF++M +R N ++ +++S C H G +K + + M++
Sbjct: 659 LAFYSDCGKLSSSFKLFQKM---PLR-NAISWNTLISGCVHNGDTKKAVALLHKMQQE 712
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 161/324 (49%), Gaps = 14/324 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C L QGK +HA + + + + + L+ +YA ++NS +F+ +
Sbjct: 825 LLPSC---XTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKED 881
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ + N ++ T N +E++ +F + + TF ++ ACV L + V A
Sbjct: 882 IALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMA 941
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
Q GF+ + + NALID++++CG + A+++F G+ +D VSW++MI+GY +
Sbjct: 942 YVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEA 1001
Query: 198 AVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMIS 257
A+ L +M+L G++P+ TY +++++ + G + + F+ M EG + + M+
Sbjct: 1002 ALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRRMEHYACMVD 1061
Query: 258 GFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI 317
++ + NEA + + KP+ + +L A + G++++G +I C + +
Sbjct: 1062 LLGRTGQLNEAYDFVEKL---PCKPSVSLLESLLXACIIHGNVKLGEKI----CSLLFEL 1114
Query: 318 DVFTGSA---LIDMYSKCGSLKDA 338
D + L ++Y+ G DA
Sbjct: 1115 DPKNSGSYVMLYNIYAAAGRWMDA 1138
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 19/282 (6%)
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
E N A++ YA+ G A +++ PDLVTWNA+ISG++ + + E
Sbjct: 375 AFEENLVIQTALVDFYAKTGRMVKARLVLDKISQ----PDLVTWNALISGYSLNGFDKEV 430
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
++ + +L G+KPN T ++ + IG+ IH V + G D F ALI M
Sbjct: 431 FEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISM 490
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y+ G+L AR LF+ KNV WN+MI Y ++ + ++F++ML+ M+ N VT
Sbjct: 491 YAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTF 550
Query: 389 ISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
+S++ C + G + MK R ++S ++ M + G A + Q+
Sbjct: 551 VSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVA--TALLSMYAKLGDXNSAXFIFYQM 608
Query: 448 PMYVT--NSMAGAFRNGCNIHGRR--------DLAVTMGEEF 479
P + +SM + G GR LA+ G+EF
Sbjct: 609 PRKTSYRDSMISGY--GIMSMGRPFFWVRLLMHLAIKTGKEF 648
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 4/216 (1%)
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
P + N MI + L ++ V G ++ T V++A G++ I +
Sbjct: 308 PSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSALGAVWIAEGV 367
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H +V R ++ +AL+D Y+K G + AR + + ++ +WNA+I Y +G
Sbjct: 368 HCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFD 427
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
E+ ++LE G++ N T S++ C+ ++ G I + G +
Sbjct: 428 KEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSI-HGFVVKSGFSSDEFLTPA 486
Query: 427 VVDMLCRSGRMVEAYDLLRQVP---MYVTNSMAGAF 459
++ M G + A DL + + NSM A+
Sbjct: 487 LISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAY 522
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 189/615 (30%), Positives = 289/615 (46%), Gaps = 102/615 (16%)
Query: 17 DCLLGKCMKSKALRQGKQVHALLCTNDL---NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
D ++ CM S ++ G V A L +++ N S + + G+ G V + F++
Sbjct: 86 DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMK-YGRVEESMWYFERN 144
Query: 74 PNPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
P NV ++W S F N EA+ F + E R N TF+ V++AC L D
Sbjct: 145 PFQNV--VSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 132 GKQVHAVATQMGFENDVSVGNALI-------------------------------DMYSK 160
G + + + GFE+ +SV N+LI D Y +
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262
Query: 161 CGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAI 220
G L ARR+F M ER+ +SW++MI+ Y +EA+ LF +M EG +PN +
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322
Query: 221 IASYARRGDSNAAFAFFSRMTAEG-----FV-------------PD-------------L 249
+++ A +A +T G F+ PD +
Sbjct: 323 LSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNV 382
Query: 250 VTWNAMISGFAQSKR---------------------------ENE----ALKLFKGMLVS 278
V WN+M+ G++ + R ENE L++F +LVS
Sbjct: 383 VCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVS 442
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G PN T + VL A S+ G +H + ++G+ D+F G+AL DMY+KCG + +
Sbjct: 443 GQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSS 502
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA-NEVTLISVLSACSH 397
+ +FE KN SW MI + G S+ LFE M A NE+ L+SVL ACSH
Sbjct: 503 KQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSH 562
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
GLV+KGL F SM++ YG+K +HY CVVD+L RSGR+ EA + +R +P +
Sbjct: 563 CGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWA 622
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
A +GC + +A ++ +++ G+V+LSNI A+ G W + N+RK+M+EK
Sbjct: 623 ALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKG 682
Query: 518 VQKQPGFSRVEKRNE 532
++K G S VE RN+
Sbjct: 683 LKKSGGCSWVEVRNQ 697
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 186/399 (46%), Gaps = 58/399 (14%)
Query: 113 KFTFSIVLKACVGLLD-------IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
K +F + CV LL I +G +HA + GF + + L+ +Y C
Sbjct: 14 KKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFA 73
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
++ D+V MIS Y + +A +LF+ M E N+ +++A+I+
Sbjct: 74 EIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMP----ERNEVSWSALISGLM 129
Query: 226 RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ G + +F R + ++V+W A ISGF ++ EALKLF +L SG++PN+V
Sbjct: 130 KYGRVEESMWYFERNPFQ----NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDV 185
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHI---------------------------- 317
T T V++A G G +G I LV + G
Sbjct: 186 TFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRM 245
Query: 318 ---DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
DV + +A++D Y + G L++AR +F+ +N SW+AMI Y + G + +++LF
Sbjct: 246 EKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFS 305
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY--ACVVDMLC 432
+M++EG + N LSA + + G+ I + + + I K+ + + ++D+ C
Sbjct: 306 KMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTK---IGIDKDVFIGSSLIDLYC 362
Query: 433 RSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
+ G+ + +DL+ + + NSM G G +I+GR
Sbjct: 363 KCGKPDDGRLVFDLILEKNVVCWNSMVG----GYSINGR 397
>gi|357511423|ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501015|gb|AES82218.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 607
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 264/506 (52%), Gaps = 37/506 (7%)
Query: 33 KQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
KQ H LL N L NI S + ++ Y + +FDK+P + ++W +M S F
Sbjct: 25 KQAHKLLDENLLSCNIVSW-NMVMTAYLQHNQIGPVHDLFDKMPLKDA--VSWNIMLSGF 81
Query: 91 TGNFQEAIGYFSLMREFIYRC-----------NKFTFSIVLKACVGL-LDIKKGKQVHAV 138
E +YRC N +T S +L+A + LD+ +QVHA+
Sbjct: 82 QRTRNS---------EGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLV-RQVHAL 131
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
A +G +V VG++LI Y+ + R F+ + +DV SW +++S Y + K +A
Sbjct: 132 AFHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVDA 191
Query: 199 VVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISG 258
F++M + N ++ ++ Y + N A + F M+ ++V+W AMISG
Sbjct: 192 QTAFDQMP----QRNIISWTTLVNGYVKNKQVNKARSVFDDMSER----NVVSWTAMISG 243
Query: 259 FAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
+ Q+KR +ALKLF M + +PN+ T + VL A + S+ +G ++H + + G+ D
Sbjct: 244 YVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIAND 303
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
V ++L+DMY+KCG + A +FE R KN+ SWNA+IG Y HG+ ++E F+RM
Sbjct: 304 VIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKV 363
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
G +EVT ++VLSAC H GLVE+G + F M +YG++ EHY+C+VD+ R+GR
Sbjct: 364 VG-TPDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFD 422
Query: 439 EAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
EA +L++ +P + GA C +H +L E + P + +LS I
Sbjct: 423 EAENLIKNMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQG 482
Query: 499 ADGEWHEAENLRKIMKEKNVQKQ-PG 523
G W LR MKE+ ++KQ PG
Sbjct: 483 EKGVWSSVNELRDTMKERGIKKQTPG 508
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/491 (31%), Positives = 265/491 (53%), Gaps = 21/491 (4%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQ--EAIGYFS 102
N S + L G+ A G + AR +FD++P+ NV ++W M + + + Q EA+ F
Sbjct: 234 NAVSWVTMLCGL-AKYGKMAEARELFDRMPSKNV--VSWNAMIATYVQDLQVDEAVKLFK 290
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M + +++ ++ + + + + +QV+ QM + D++ AL+ + G
Sbjct: 291 KMPH----KDSVSWTTIINGYIRVGKLDEARQVY---NQMPCK-DITAQTALMSGLIQNG 342
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
+ A ++F + DVV W SMI+GY ++DEA+ LF +M ++ N ++N +I+
Sbjct: 343 RIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIK----NSVSWNTMIS 398
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA+ G + A F M + ++V+WN++I+GF Q+ +ALK M G KP
Sbjct: 399 GYAQAGQMDRATEIFQAMREK----NIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKP 454
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ T L A ++Q+G ++H + + G D+F G+ALI MY+KCG ++ A +F
Sbjct: 455 DQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVF 514
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
++ SWN++I Y +G + + + FE+M E + +EVT I +LSACSH GL
Sbjct: 515 RDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLAN 574
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+GL+IF+ M E + ++ EHY+C+VD+L R GR+ EA++ +R + + + G+
Sbjct: 575 QGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGA 634
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C +H +L E FE+ ++ LSN+ A G W E E +R +M+ K KQP
Sbjct: 635 CRVHKNLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQP 694
Query: 523 GFSRVEKRNEF 533
G S +E +N+
Sbjct: 695 GCSWIEVQNQI 705
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 191/429 (44%), Gaps = 68/429 (15%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR 110
+ ++ V A + AR +FD++ N+ N M+ +EA F +M E
Sbjct: 52 NSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPER--- 108
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
+ F++++++ ++K +++ + + D + NA+I Y+K G A++V
Sbjct: 109 -DNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAMIAGYAKKGQFNDAKKV 164
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDS 230
F M +D+VS+ SM++GY K+ A+ FE M E N ++N ++A Y + GD
Sbjct: 165 FEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMT----ERNVVSWNLMVAGYVKSGDL 220
Query: 231 NAAFAFFSRMTAEGFVP---------------------------DLVTWNAMISGFAQSK 263
++A+ F ++ V ++V+WNAMI+ + Q
Sbjct: 221 SSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDL 280
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGL----------------------TGSIQ 301
+ +EA+KLFK M + G ++ G L +G IQ
Sbjct: 281 QVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQ 340
Query: 302 IGR--EIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGC 359
GR E + R+G H DV +++I YS+ G + +A LF IKN SWN MI
Sbjct: 341 NGRIDEADQMFSRIGAH-DVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISG 399
Query: 360 YGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKI 419
Y + G +D + E+F+ M E+ N V+ S+++ L L+ M + G K
Sbjct: 400 YAQAGQMDRATEIFQAMREK----NIVSWNSLIAGFLQNNLYLDALKSLVMMGKE-GKKP 454
Query: 420 SKEHYACVV 428
+ +AC +
Sbjct: 455 DQSTFACTL 463
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 190/429 (44%), Gaps = 90/429 (20%)
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL- 210
N I K G + A R+F M +++V++ SMIS +++ +A LF++M L L
Sbjct: 21 NRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLV 80
Query: 211 --------------------------EPNQFTYNAII----------------------- 221
E + F++ +I
Sbjct: 81 SWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL 140
Query: 222 ---------ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLF 272
A YA++G N A F +M A+ DLV++N+M++G+ Q+ + + AL+ F
Sbjct: 141 DTACWNAMIAGYAKKGQFNDAKKVFEQMPAK----DLVSYNSMLAGYTQNGKMHLALQFF 196
Query: 273 KGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC 332
+ M + N+ V G +++G L+ + Q+ +I + + + ++ +K
Sbjct: 197 ESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIP--------NPNAVSWVTMLCGLAKY 248
Query: 333 GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVL 392
G + +AR LF+ KNV SWNAMI Y + VD +++LF++M + + V+ +++
Sbjct: 249 GKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHK----DSVSWTTII 304
Query: 393 SACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY-- 450
+ G +++ +++ M + I+ + ++ L ++GR+ EA + ++ +
Sbjct: 305 NGYIRVGKLDEARQVYNQMPCK---DITAQ--TALMSGLIQNGRIDEADQMFSRIGAHDV 359
Query: 451 -VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENL 509
NSM + GR D A+ + F +M ++ + + + A G+ A +
Sbjct: 360 VCWNSMIAGYSRS----GRMDEALNL---FRQMPIKNSVSWNTMISGYAQAGQMDRATEI 412
Query: 510 RKIMKEKNV 518
+ M+EKN+
Sbjct: 413 FQAMREKNI 421
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 18 CLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C L C AL+ G Q+H +L + +N + + L+ +YA CG V SA VF I
Sbjct: 461 CTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECV 520
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGL----LDIK 130
++ N ++ A G +A F M ++ TF +L AC GL LDI
Sbjct: 521 DLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIF 580
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGY 189
K + E + L+D+ + G L A GM + + W S++ G
Sbjct: 581 K-----CMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLL-GA 634
Query: 190 CNVSKVDEAVVLFERMKLEGLEPN 213
C V K E + F +L LEP+
Sbjct: 635 CRVHKNLE-LGRFAAERLFELEPH 657
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 320 FTGSALIDMYSKCGSLKDA-RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
F + I K G +++A R F +T KN+ ++N+MI K+ + + +LF++M
Sbjct: 18 FNHNRQIIQLGKLGKVEEAIRIFFNMTH-KNLVTYNSMISVLAKNARIRDARQLFDQM-- 74
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMV 438
+R N V+ ++++ H +VE+ E+F M ER +A ++ R G++
Sbjct: 75 -SLR-NLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFS-----WALMITCYTRKGKLE 127
Query: 439 EAYDLLRQVP 448
+A +LL VP
Sbjct: 128 KARELLELVP 137
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 163/508 (32%), Positives = 262/508 (51%), Gaps = 40/508 (7%)
Query: 27 KALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
K+L+ +Q H+ + + L+ SL +KL+ YA C +RLVFD + + NVF+ N ++
Sbjct: 37 KSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLI 96
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
A + EA F+ M + FT S + K L + GK +H + ++GF
Sbjct: 97 NGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFV 156
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+D V N+++ MY KCG +R+VF M R+ SW +I+GY + +F+RM
Sbjct: 157 SDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVFDRM 216
Query: 206 KLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
K N F++ A+I Y GDS+ A + F M
Sbjct: 217 KCR----NVFSWTAMINGYVENGDSDEALSLFRDM------------------------- 247
Query: 266 NEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSAL 325
++ GI+PN V++ VL A + GR+IH R L+ +V +AL
Sbjct: 248 ---------QVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNAL 298
Query: 326 IDMYSKCGSLKDARTLFEITRI-KNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
IDMYSKCGSL AR +FE + K+ SW++MI YG HG +I L+++ML+ G+R +
Sbjct: 299 IDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPD 358
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
+T + +LSACS GLV +GL I+ S+ YG++ + E +AC+VDML R+G++ A D +
Sbjct: 359 MITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFI 418
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
+ +P+ S+ GA + IHG ++ ++ P +V +SN+ A+ W
Sbjct: 419 KAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWD 478
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+R++MK+K ++K PG S + N+
Sbjct: 479 AVAEVRRMMKDKRLRKVPGCSWISINNK 506
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 9/221 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVF-DKIPNP 76
+L C L G+Q+H +L N SL + L+ +Y+ CG ++SAR VF D
Sbjct: 263 VLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCK 322
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ + M+ G QEAI + M + R + T +L AC + +G ++
Sbjct: 323 DAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIY 382
Query: 137 -AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSK 194
+V G E + + ++DM + G L A M E W +++S C++
Sbjct: 383 SSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVS--CSIIH 440
Query: 195 VDEAVVLFERMKLEGLEP-NQFTYNAIIASYA--RRGDSNA 232
D + L LEP N Y +I YA RR D+ A
Sbjct: 441 GDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVA 481
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 258/490 (52%), Gaps = 23/490 (4%)
Query: 45 NIFSLKSKLVGVYA-GCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSL 103
+ S S + G + GC D ++ +F +P NV N M+ EA YF
Sbjct: 5 DTVSWNSIITGYWKNGCFD--ESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQA 62
Query: 104 MREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL 163
M + N +++ ++ GL+ + ++ + +M N +S A++D Y+K G
Sbjct: 63 MPQR----NTASWNAMIS---GLVRYDRVEEASRLFEEMPRRNVISY-TAMVDGYAKIGE 114
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
+ AR +F+ M +++VVSWT MISGY K DEA LFE+M + N A+I
Sbjct: 115 IEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMP----DKNIVAMTAMITG 170
Query: 224 YARRGDSNAAFAFFSRMTAEGFVP--DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y + G ++ A F + +P DL +WNAMI+G+AQ+ EALKL ML G++
Sbjct: 171 YCKEGKTDKAKILFDQ------IPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQ 224
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P++ T+ VL A S+Q GR+ H LV + G + +ALI MY KCGS+ D+
Sbjct: 225 PDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELA 284
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F +V SWNAMI + +HG D ++ F M + + +T +S+LSAC H G V
Sbjct: 285 FRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKV 344
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
+ L F SM E Y + EH+AC+VD+L R G++ +AY +++++P + GA
Sbjct: 345 HESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLA 404
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C++H L ++ E+ + +V+LSNI AA G W E +R +M+E+ V+KQ
Sbjct: 405 ACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQ 464
Query: 522 PGFSRVEKRN 531
P +S +E N
Sbjct: 465 PAYSWMEIDN 474
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 174/371 (46%), Gaps = 58/371 (15%)
Query: 174 MFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEP--NQFTYNAIIASYARRGDSN 231
M RD VSW S+I+GY DE+ LF GL P N ++N++IA +
Sbjct: 1 MPHRDTVSWNSIITGYWKNGCFDESKRLF------GLMPTKNVVSWNSMIAGCIEDERID 54
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A+ +F M + +WNAMISG + R EA +LF+ M + V G
Sbjct: 55 EAWQYFQAMPQR----NTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYA 110
Query: 292 QAGG----------------------LTGSIQIGR--EIHALVCRMGLHIDVFTGSALID 327
+ G ++G ++ G+ E L +M ++ +A+I
Sbjct: 111 KIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMP-DKNIVAMTAMIT 169
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
Y K G A+ LF+ +++ASWNAMI Y ++G + +++L +ML+ GM+ + T
Sbjct: 170 GYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHST 229
Query: 388 LISVLSACSHGGLVEKGLEIF-RSMKERYGVKISKEHYAC--VVDMLCRSGRMVEAYDLL 444
LISVL+ACS +++G + +K Y +IS C ++ M C+ G ++++
Sbjct: 230 LISVLTACSSLASLQEGRKTHVLVLKSGYESRIS----ICNALITMYCKCGSILDSELAF 285
Query: 445 RQV--PMYVT-NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK--PDGFVMLS--NIC 497
RQ+ P V+ N+M AF HG D A+ F EM + PDG LS + C
Sbjct: 286 RQIDHPDVVSWNAMIAAFAR----HGFYDRALA---SFGEMRSNRVEPDGITFLSLLSAC 338
Query: 498 AADGEWHEAEN 508
G+ HE+ N
Sbjct: 339 GHAGKVHESLN 349
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 1/198 (0%)
Query: 43 DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFS 102
D NI ++ + + G Y G + A+++FD+IP ++ N M+ A G+ +EA+ S
Sbjct: 158 DKNIVAMTAMITG-YCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHS 216
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCG 162
M + + + T VL AC L +++G++ H + + G+E+ +S+ NALI MY KCG
Sbjct: 217 QMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCG 276
Query: 163 LLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA 222
+ + F + DVVSW +MI+ + D A+ F M+ +EP+ T+ ++++
Sbjct: 277 SILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLS 336
Query: 223 SYARRGDSNAAFAFFSRM 240
+ G + + +F+ M
Sbjct: 337 ACGHAGKVHESLNWFNSM 354
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 161/552 (29%), Positives = 276/552 (50%), Gaps = 45/552 (8%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C ++L G+++H ++ + L++ L S L+ +Y CG + +A +F+ I + +
Sbjct: 221 CSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRR 280
Query: 82 N---WMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N W VM S + N F +A+ F M + + + T + C LDI GKQ+H
Sbjct: 281 NAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIH 340
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ + G +N++ V AL+DMY KCG + + ++F +++ W+++IS
Sbjct: 341 GLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPT 400
Query: 197 EAVVLFERMKLE-----------------------------------GLEPNQFTYNAII 221
+A+ LF K+E G + F +A++
Sbjct: 401 KALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALV 460
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
YA+ D + F R++ + DLV+WNA+ISG+AQ + +EALK F+ M + I+
Sbjct: 461 DLYAKCRDMGYSKKVFLRLSQK----DLVSWNALISGYAQDECADEALKAFRDMQLEEIR 516
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN VT+ +L + + +E+H + R GL V ++LI Y+KCG + +
Sbjct: 517 PNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYT 576
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
FE +N SWN++I G H D I LF++M+ G++ + VT ++LSACSH G V
Sbjct: 577 FEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRV 636
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
++G + F+SM E + +K E Y C+VD+L R+G + +AYDL+ +P + + G+
Sbjct: 637 DEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLG 696
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C HG LA + F++ V+L+N+ G+ E +R +K+ ++K+
Sbjct: 697 SCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKK 756
Query: 522 PGFSRVEKRNEF 533
PG S +E N F
Sbjct: 757 PGCSWIEVDNNF 768
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 143/566 (25%), Positives = 259/566 (45%), Gaps = 80/566 (14%)
Query: 15 YLDCLLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
Y CL+ + +G+Q+H +L L+ S+ + L+ +Y CG V A +F+K+
Sbjct: 111 YFPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKM 170
Query: 74 PNPNVFMLNWMVMASAF--TGNFQEAIGYF-SLMREFIYRCNKFTFSIVLKACVGLLDIK 130
P V +++W M S F + ++ ++ +F S++ EF N+ + +C L +
Sbjct: 171 --PEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLT 228
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD-----VVSWTSM 185
G+++H V + G + + + ++LI+MY KCG + +A +F+ + ++D V W M
Sbjct: 229 HGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVM 288
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY---------------------------- 217
ISGY + +A++LF +M + G++P+ T
Sbjct: 289 ISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGL 348
Query: 218 -------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
A++ Y + GD F R +L+ W+A+IS AQS +AL+
Sbjct: 349 KNNIRVETALLDMYLKCGDMGTGLKIFRRSQNH----NLIMWSAVISNCAQSGCPTKALE 404
Query: 271 LFKGM-LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
LF + G+ + + V + LT + G +IH L +MG DVF GSAL+D+Y
Sbjct: 405 LFYEFKMEDGLADSGILVAVLRACSSLTLKPE-GMQIHGLATKMGFVSDVFVGSALVDLY 463
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
+KC + ++ +F K++ SWNA+I Y + D +++ F M E +R N VT+
Sbjct: 464 AKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIA 523
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV-- 447
+LS C+H L + KE +G I + + V+ S ++ Y +
Sbjct: 524 CILSVCAH-------LSVMTLCKEVHGYLIRQGLGSTVL----VSNSLIATYAKCGDINS 572
Query: 448 PMYVTNSMAGAFRN---------GCNIHGRRDLAVTMGEEFFEMGLRKPD--GFVMLSNI 496
+Y M RN G +H R D + + ++ G+ KPD F + +
Sbjct: 573 SLYTFEKMPE--RNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGI-KPDHVTFTAILSA 629
Query: 497 CAADGEWHEA-ENLRKIMKEKNVQKQ 521
C+ G E + + ++++ N++ Q
Sbjct: 630 CSHAGRVDEGCKYFKSMVEDFNLKPQ 655
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 180/355 (50%), Gaps = 40/355 (11%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFT-FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
G F +AIG + M + + +F F ++KA GL D+ KG+Q+H ++G +DVSV
Sbjct: 87 GFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSV 146
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE-G 209
N+L+ MY KCG++ A ++F M E D+VSW +MISG+ +++ F M E G
Sbjct: 147 VNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFG 206
Query: 210 LEPN-----------------------------------QFTYNAIIASYARRGD-SNAA 233
+ PN ++ +++I Y + G NA
Sbjct: 207 IYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAE 266
Query: 234 FAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQA 293
F S + + + V WN MISG+ + ++AL LF M+V GIKP+ T+ +
Sbjct: 267 NIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSL 326
Query: 294 GGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
+ I G++IH L+ + GL ++ +AL+DMY KCG + +F ++ N+ W
Sbjct: 327 CSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMW 386
Query: 354 NAMIGCYGKHGMVDSSIELF-ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
+A+I + G ++ELF E +E+G+ A+ L++VL ACS L +G++I
Sbjct: 387 SAVISNCAQSGCPTKALELFYEFKMEDGL-ADSGILVAVLRACSSLTLKPEGMQI 440
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 124/260 (47%), Gaps = 4/260 (1%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C +G Q+H L ++F + S LV +YA C D+ ++ VF ++
Sbjct: 424 VLRACSSLTLKPEGMQIHGLATKMGFVSDVF-VGSALVDLYAKCRDMGYSKKVFLRLSQK 482
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N ++ A EA+ F M+ R N T + +L C L + K+VH
Sbjct: 483 DLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVH 542
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ G + V V N+LI Y+KCG + S+ F M ER+ VSW S+I G S+ D
Sbjct: 543 GYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTD 602
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAM 255
E +VLF++M G++P+ T+ AI+++ + G + +F M + P L + M
Sbjct: 603 EMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCM 662
Query: 256 ISGFAQSKRENEALKLFKGM 275
+ ++ N+A L M
Sbjct: 663 VDLLGRAGHLNQAYDLIMAM 682
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 238/447 (53%), Gaps = 40/447 (8%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
+ + AC+ + +G+QVHA + V +G L+ MY +CG L AR V M
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS------------ 223
ER VVSWT+MISGY + EA+ LF +M G PN++T ++ S
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 224 -----------------------YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
YA+ + A F + D+V+ A+ISG+A
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPER----DVVSCTAIISGYA 188
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q + EAL LF+ + G++ N+VT T ++ A S+ G+++HAL+ R L V
Sbjct: 189 QKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVA 248
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
++LIDMYSKCG L +R +F+ ++V SWNAM+ YG+HG+ I LF+ + +E
Sbjct: 249 LQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE- 307
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++ + VTL++VLS CSHGGLV++GL+IF ++ + + HY C++D+L RSGR+ +A
Sbjct: 308 VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKA 367
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAAD 500
+L+ +P T S+ G+ C +H + + ++ EM +V+LSNI AA
Sbjct: 368 LNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAA 427
Query: 501 GEWHEAENLRKIMKEKNVQKQPGFSRV 527
G W + +RK+M EK V K+PG S +
Sbjct: 428 GMWKDVFKVRKLMLEKTVTKEPGQSWI 454
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 196/395 (49%), Gaps = 45/395 (11%)
Query: 23 CMKSKALRQGKQVHALLCTNDLN--IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
C++ +AL +G+QVHA + T +F L ++LV +Y CG ++ AR V D++P +V
Sbjct: 20 CIERRALWEGRQVHARMITARYRPAVF-LGTRLVTMYVRCGALDDARNVLDRMPERSV-- 76
Query: 81 LNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
++W M S + T EA+ F M N++T + VL +C G I +GKQVH++
Sbjct: 77 VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 136
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ FE+ + VG++L+DMY+K + ARRVF + ERDVVS T++ISGY +EA
Sbjct: 137 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 196
Query: 199 VVLFERMKLEGLEPNQFTYNAIIAS--------YARRGD--------------------- 229
+ LF ++ EG++ N T+ ++ + Y ++
Sbjct: 197 LDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDM 256
Query: 230 -SNAAFAFFSRMTAEGFVP-DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
S +SR + + +V+WNAM+ G+ + +E + LFK L +KP++VT+
Sbjct: 257 YSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVKPDSVTL 315
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMG---LHIDVFTGSALIDMYSKCGSLKDARTLFEI 344
VL G + G +I V + LH + +ID+ + G L+ A L E
Sbjct: 316 LAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY--GCIIDLLGRSGRLEKALNLIEN 373
Query: 345 TRIKNVAS-WNAMIGCYGKHGMVDSSIELFERMLE 378
++ S W +++G H V + +++LE
Sbjct: 374 MPFESTPSIWGSLLGACRVHANVHVGELVAQKLLE 408
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 134/262 (51%), Gaps = 3/262 (1%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C +++ QGKQVH+LL TN + + S L+ +YA ++ AR VFD +P
Sbjct: 114 LATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+V ++ A G +EA+ F + +CN TF+ ++ A GL + GKQ
Sbjct: 174 ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQ 233
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VHA+ + V++ N+LIDMYSKCG L +RRVF M ER VVSW +M+ GY
Sbjct: 234 VHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGL 293
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWN 253
E + LF+ + E ++P+ T A+++ + G + F + E + +
Sbjct: 294 GHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYG 352
Query: 254 AMISGFAQSKRENEALKLFKGM 275
+I +S R +AL L + M
Sbjct: 353 CIIDLLGRSGRLEKALNLIENM 374
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 173/622 (27%), Positives = 292/622 (46%), Gaps = 107/622 (17%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVF 70
S NY L C +++ Q K++H + N + L + L+ Y GD+ +AR VF
Sbjct: 4 SSNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVF 63
Query: 71 DKIPNPNVFMLN-----------------------------WMVMASAFTGN--FQEAIG 99
D IP PN+F N W + S + GN E++
Sbjct: 64 DHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVR 123
Query: 100 YFSLM-REFIYRCNKFTFS--IVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALID 156
+++M ++ N+ TFS ++L + G +D+ G+Q+H + G+++ + VG+ L+D
Sbjct: 124 VYNMMLKDGSVNLNRITFSTMLILSSNRGFVDL--GRQIHGQIFKFGYQSYLFVGSPLVD 181
Query: 157 MYSKCGLLCSARRVFH-------------------------------GMFERDVVSWTSM 185
MY+K G + A R+F M E+D +SWT++
Sbjct: 182 MYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTI 241
Query: 186 ISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAI---------------IASYARRGDS 230
I+G EAV F+ M +EG +QFT+ ++ I +Y R D
Sbjct: 242 ITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDY 301
Query: 231 NA--------------------AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
A A F +M + ++++W AM+ G+ Q+ EA++
Sbjct: 302 QDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHK----NVISWTAMLVGYGQNGYSEEAVR 357
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
+F M + I P++ T+ V+ + S++ G + H GL V +ALI +Y
Sbjct: 358 IFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYG 417
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLIS 390
KCGSL+ A LF +I++ SW A++ Y + G + +I LFE ML G+ + VT +
Sbjct: 418 KCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVG 477
Query: 391 VLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMY 450
VLSACS GLVEKG F M + + + +HY C++D+L R+GR+ EA + + Q+P
Sbjct: 478 VLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFS 537
Query: 451 VTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLR 510
+ C ++G ++ E ++ + P +++LS+I AA G+W + LR
Sbjct: 538 PDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLR 597
Query: 511 KIMKEKNVQKQPGFSRVEKRNE 532
K M+E V+K+PG S ++ +N+
Sbjct: 598 KGMREMGVKKEPGHSWIKYKNK 619
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 174/557 (31%), Positives = 272/557 (48%), Gaps = 52/557 (9%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDK 72
+ LD +G + A+R+G +H + S +V G + A+ VFD
Sbjct: 156 TDLLDDEVGMEIIRAAVRRGFHLH----------LYVGSSMVNFLVKRGYLADAQKVFDG 205
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK- 131
+P +V N ++ G F E+I F M R + T + +LKAC G +KK
Sbjct: 206 MPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKAC-GQSGLKKV 264
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G H+ +G NDV V +L+DMYS G SA VF M R ++SW +MISGY
Sbjct: 265 GMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQ 324
Query: 192 VSKVDEAVVLFERMKLEG-----------------------------------LEPNQFT 216
+ E+ LF R+ G LE +
Sbjct: 325 NGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVL 384
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
AI+ Y++ G A F RM + +++TW AM+ G +Q+ +ALKLF M
Sbjct: 385 STAIVDMYSKCGAIKQATIVFGRMGKK----NVITWTAMLVGLSQNGYAEDALKLFCQMQ 440
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
+ N+VT+ ++ GS+ GR +HA R G D SALIDMY+KCG +
Sbjct: 441 EEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIH 500
Query: 337 DARTLFEIT-RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
A LF +K+V N+MI YG HG ++ ++ RM+EE ++ N+ T +S+L+AC
Sbjct: 501 SAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTAC 560
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH GLVE+G +F SM+ + V+ +HYAC+VD+ R+GR+ EA +L++Q+P + +
Sbjct: 561 SHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDV 620
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
A +GC H ++ + + + + +VMLSNI A +W +R +M+
Sbjct: 621 LEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRM 680
Query: 516 KNVQKQPGFSRVEKRNE 532
+ ++K PG+S +E N+
Sbjct: 681 QGMKKIPGYSLIEVGNK 697
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 155/541 (28%), Positives = 253/541 (46%), Gaps = 57/541 (10%)
Query: 26 SKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
S L K +HA + N ++ S L +KL+ VY+ G + AR VFD+ P + N M
Sbjct: 57 SNTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAM 116
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ E F +M N +T LKAC LLD + G ++ A + GF
Sbjct: 117 IAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGF 176
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+ VG+++++ K G L A++VF GM E+DVV W S+I GY E++ +F
Sbjct: 177 HLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLE 236
Query: 205 MKLEGLEPNQ-----------------------------------FTYNAIIASYARRGD 229
M GL P+ F +++ Y+ GD
Sbjct: 237 MIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGD 296
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
+ +A F M + L++WNAMISG+ Q+ E+ LF+ ++ SG ++ T+
Sbjct: 297 TGSAALVFDSMCSR----SLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVS 352
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
+++ T ++ GR +H+ + R L + +A++DMYSKCG++K A +F KN
Sbjct: 353 LIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKN 412
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
V +W AM+ ++G + +++LF +M EE + AN VTL+S++ C+H G + KG +
Sbjct: 413 VITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHA 472
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ----VPMYVTNSMAGAFRNGCNI 465
R+G + ++DM + G++ A L + + NSM + G +
Sbjct: 473 HFI-RHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGY--GMHG 529
Query: 466 HGRRDLAV--TMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIM-KEKNVQK 520
HGR L V M EE KP+ FV L C+ G E + L M ++ +V+
Sbjct: 530 HGRYALGVYSRMIEERL-----KPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRP 584
Query: 521 Q 521
Q
Sbjct: 585 Q 585
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,009,864,098
Number of Sequences: 23463169
Number of extensions: 323106987
Number of successful extensions: 1160879
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11659
Number of HSP's successfully gapped in prelim test: 1124
Number of HSP's that attempted gapping in prelim test: 939866
Number of HSP's gapped (non-prelim): 68342
length of query: 544
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 396
effective length of database: 8,886,646,355
effective search space: 3519111956580
effective search space used: 3519111956580
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 79 (35.0 bits)