BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044352
(544 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 330 bits (847), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 194/551 (35%), Positives = 296/551 (53%), Gaps = 42/551 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C LR GK++H LL + L++F++ + L +YA C VN AR VFD++P
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM-TGLENMYAKCRQVNEARKVFDRMPER 199
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N +V + G + A+ M E + + T VL A L I GK++H
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + GF++ V++ AL+DMY+KCG L +AR++F GM ER+VVSW SMI Y
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPK 319
Query: 197 EAVVLFERMKLEGLEP-----------------------------------NQFTYNAII 221
EA+++F++M EG++P N N++I
Sbjct: 320 EAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLI 379
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
+ Y + + + A + F ++ + LV+WNAMI GFAQ+ R +AL F M +K
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSR----TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ T V+ A + IH +V R L +VF +AL+DMY+KCG++ AR +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F++ ++V +WNAMI YG HG +++ELFE M + ++ N VT +SV+SACSH GLV
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
E GL+ F MKE Y +++S +HY +VD+L R+GR+ EA+D + Q+P+ ++ GA
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C IH + A E FE+ V+L+NI A W + +R M + ++K
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 522 PGFSRVEKRNE 532
PG S VE +NE
Sbjct: 676 PGCSMVEIKNE 686
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/525 (27%), Positives = 244/525 (46%), Gaps = 64/525 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL +C K LRQ + L+ N L ++KLV ++ G V+ A VF+ I +
Sbjct: 43 LLERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ + M+ A + +A+ +F MR + F+ +LK C +++ GK++H
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ + GF D+ L +MY+KC + AR+VF M ERD+VSW ++++GY
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
A+ + + M E L+P+ T A++
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA+ G A F M ++V+WN+MI + Q++ EA+ +F+ ML G+KP
Sbjct: 280 MYAKCGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+V+V G L A G ++ GR IH L +GL +V ++LI MY KC + A ++F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ + + SWNAMI + ++G ++ F +M ++ + T +SV++A +
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE----- 450
Query: 403 KGLEIFRSMKERYGVK----ISKEHY--ACVVDMLCRSGRMVEA---YDLLRQVPMYVTN 453
L I K +GV + K + +VDM + G ++ A +D++ + + N
Sbjct: 451 --LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWN 508
Query: 454 SMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+M +G HG A+ + EE + G KP+G LS I A
Sbjct: 509 AMI----DGYGTHGFGKAALELFEE-MQKGTIKPNGVTFLSVISA 548
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 151/311 (48%), Gaps = 13/311 (4%)
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
GL F +++ + R G + A F + ++ V ++ M+ GFA+ ++A
Sbjct: 64 GLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNV----LYHTMLKGFAKVSDLDKA 119
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
L+ F M ++P T +L+ G +++G+EIH L+ + G +D+F + L +M
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y+KC + +AR +F+ +++ SWN ++ Y ++GM ++E+ + M EE ++ + +T+
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLR 445
+SVL A S L+ G EI R G +VDM + G + A +D +
Sbjct: 240 VSVLPAVSALRLISVGKEI-HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS-NICAADGEWH 504
+ + NSM A+ N A+ + ++ + G++ D VM + + CA G+
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKE----AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLE 354
Query: 505 EAENLRKIMKE 515
+ K+ E
Sbjct: 355 RGRFIHKLSVE 365
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 325 bits (834), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 284/514 (55%), Gaps = 8/514 (1%)
Query: 19 LLGKCMKS-KALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LLG+ + + +R + VH+ + DL SL KL+ YA DV SAR VFD+IP
Sbjct: 44 LLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPER 103
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
NV ++N M+ + G + E + F M R + +TF VLKAC I G+++H
Sbjct: 104 NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIH 163
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
AT++G + + VGN L+ MY KCG L AR V M RDVVSW S++ GY + D
Sbjct: 164 GSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFD 223
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA--FFSRMTAEGFVPDLVTWNA 254
+A+ + M+ + + T +++ + + N + F +M + LV+WN
Sbjct: 224 DALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKS----LVSWNV 279
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
MI + ++ EA++L+ M G +P+ V++T VL A G T ++ +G++IH + R
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 315 LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFE 374
L ++ +ALIDMY+KCG L+ AR +FE + ++V SW AMI YG G ++ LF
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 375 RMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRS 434
++ + G+ + + ++ L+ACSH GL+E+G F+ M + Y + EH AC+VD+L R+
Sbjct: 400 KLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 459
Query: 435 GRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS 494
G++ EAY ++ + M + GA C +H D+ + ++ F++ + +V+LS
Sbjct: 460 GKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLS 519
Query: 495 NICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
NI A G W E N+R IMK K ++K PG S VE
Sbjct: 520 NIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVE 553
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 293/548 (53%), Gaps = 46/548 (8%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVF 79
L C + + L GK++H L + + L+ +YA CG++ SA VF+ I NV
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNV- 207
Query: 80 MLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
+ W M + + N +E + F+ MRE N++T+ ++ AC L + +GK H
Sbjct: 208 -VCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHG 266
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ G E + +L+DMY KCG + +ARRVF+ D+V WT+MI GY + V+E
Sbjct: 267 CLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE 326
Query: 198 AVVLFERMKLEGLEPNQFTY----------------------------------NAIIAS 223
A+ LF++MK ++PN T NA++
Sbjct: 327 ALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHM 386
Query: 224 YAR-RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA+ + +A + F M +E D+V WN++ISGF+Q+ +EAL LF M + P
Sbjct: 387 YAKCYQNRDAKYVF--EMESE---KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTP 441
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL--HIDVFTGSALIDMYSKCGSLKDART 340
N VTV + A GS+ +G +HA ++G V G+AL+D Y+KCG + AR
Sbjct: 442 NGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARL 501
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+F+ KN +W+AMIG YGK G S+ELFE ML++ + NE T S+LSAC H G+
Sbjct: 502 IFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGM 561
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V +G + F SM + Y S +HY C+VDML R+G + +A D++ ++P+ GAF
Sbjct: 562 VNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFL 621
Query: 461 NGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQK 520
+GC +H R DL + ++ ++ +V++SN+ A+DG W++A+ +R +MK++ + K
Sbjct: 622 HGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSK 681
Query: 521 QPGFSRVE 528
G S +E
Sbjct: 682 IAGHSTME 689
Score = 226 bits (575), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 151/441 (34%), Positives = 228/441 (51%), Gaps = 58/441 (13%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL KC +LRQ H +L N L S+ +KLV +Y G ARLVFD+IP P+
Sbjct: 50 LLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 78 VFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
++ W VM + N + E + + L+ + +R + FS LKAC L D+ GK++
Sbjct: 107 FYL--WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 136 HAVATQM-GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
H ++ F+N V G L+DMY+KCG + SA +VF+ + R+VV WTSMI+GY
Sbjct: 165 HCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 222
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIAS------------------------------- 223
+E +VLF RM+ + N++TY +I +
Sbjct: 223 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 282
Query: 224 ----YARRGD-SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
Y + GD SNA R+ E DLV W AMI G+ + NEAL LF+ M
Sbjct: 283 LLDMYVKCGDISNA-----RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV 337
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
IKPN VT+ VL GL ++++GR +H L ++G+ D +AL+ MY+KC +DA
Sbjct: 338 EIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDA 396
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+ +FE+ K++ +WN++I + ++G + ++ LF RM E + N VT+ S+ SAC+
Sbjct: 397 KYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASL 456
Query: 399 GLVEKGLEIFRSMKERYGVKI 419
G + G S Y VK+
Sbjct: 457 GSLAVG-----SSLHAYSVKL 472
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 12/345 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
+L C + L G+ VH L + ++ + LV +YA C A+ VF+ ++
Sbjct: 349 VLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDI 408
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
N ++ + G+ EA+ F M N T + + AC L + G +HA
Sbjct: 409 VAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAY 468
Query: 139 ATQMGF--ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ ++GF + V VG AL+D Y+KCG SAR +F + E++ ++W++MI GY
Sbjct: 469 SVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTI 528
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAM 255
++ LFE M + +PN+ T+ +I+++ G N +FS M + F P + M
Sbjct: 529 GSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCM 588
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
+ A++ +AL + + M I+P+ L G+ +G + + + L
Sbjct: 589 VDMLARAGELEQALDIIEKM---PIQPDVRCFGAFLHGCGMHSRFDLGEIV--IKKMLDL 643
Query: 316 HIDVFTGSALI-DMYSKCG---SLKDARTLFEITRIKNVASWNAM 356
H D + L+ ++Y+ G K+ R L + + +A + M
Sbjct: 644 HPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688
>sp|Q9FGR2|PP436_ARATH Pentatricopeptide repeat-containing protein At5g59600
OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1
Length = 534
Score = 313 bits (803), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/474 (35%), Positives = 273/474 (57%), Gaps = 1/474 (0%)
Query: 31 QGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
+G+ +HA L T+ + + + +KLV Y CG V AR VFD++P ++ M+ A A
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
G +QE++ +F M + + + F +LKA LLD + GK +H + + +E+D
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+ ++LIDMYSK G + +AR+VF + E+D+V + +MISGY N S+ DEA+ L + MKL G
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
++P+ T+NA+I+ ++ + M +G+ PD+V+W ++ISG + + +A
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMY 329
FK ML G+ PN+ T+ +L A ++ G+EIH GL F SAL+DMY
Sbjct: 274 DAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMY 333
Query: 330 SKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
KCG + +A LF T K ++N+MI CY HG+ D ++ELF++M G + + +T
Sbjct: 334 GKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFT 393
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
++L+ACSH GL + G +F M+ +Y + EHYAC+VD+L R+G++VEAY++++ + M
Sbjct: 394 AILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRM 453
Query: 450 YVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEW 503
+ GA C HG +LA + E+ ++L+++ A G W
Sbjct: 454 EPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSW 507
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 196/570 (34%), Positives = 300/570 (52%), Gaps = 64/570 (11%)
Query: 27 KALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+ L GKQVHA L +LN F + + LV +Y G + S++++ + ++ W
Sbjct: 216 EGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRD--LVTWNT 272
Query: 86 MASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
+ S+ N Q EA+ Y M ++FT S VL AC L ++ GK++HA A + G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 144 -FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
+ + VG+AL+DMY C + S RRVF GMF+R + W +MI+GY EA++LF
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 203 ERMK------------------------------------LEGLEPNQFTYNAIIASYAR 226
M+ GL+ ++F N ++ Y+R
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 227 RGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL-----------KLFKGM 275
G + A F +M DLVTWN MI+G+ S+ +AL K+ KG
Sbjct: 453 LGKIDIAMRIFGKMEDR----DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 508
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+KPN++T+ +L + ++ G+EIHA + L DV GSAL+DMY+KCG L
Sbjct: 509 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ +R +F+ KNV +WN +I YG HG +I+L M+ +G++ NEVT ISV +AC
Sbjct: 569 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH G+V++GL IF MK YGV+ S +HYACVVD+L R+GR+ EAY L+ +P
Sbjct: 629 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNK-- 686
Query: 456 AGAFRN---GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKI 512
AGA+ + IH ++ + ++ +V+L+NI ++ G W +A +R+
Sbjct: 687 AGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRN 746
Query: 513 MKEKNVQKQPGFSRVEKRNEFVEKEVQNES 542
MKE+ V+K+PG S +E +E V K V +S
Sbjct: 747 MKEQGVRKEPGCSWIEHGDE-VHKFVAGDS 775
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 228/486 (46%), Gaps = 54/486 (11%)
Query: 14 NY-LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLK--SKLVGVYAGCGDVNSARLVF 70
NY LL + + GKQ+HA + + S+ + LV +Y CGD + VF
Sbjct: 97 NYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVF 156
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL--- 127
D+I N N ++ + ++ A+ F M + + FT V+ AC L
Sbjct: 157 DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+ GKQVHA + G N + N L+ MY K G L S++ + RD+V+W +++S
Sbjct: 217 GLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFS---- 238
C ++ EA+ M LEG+EP++FT ++++ + + R G A+A +
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 335
Query: 239 ----------------------RMTAEG-FVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
R +G F + WNAMI+G++Q++ + EAL LF GM
Sbjct: 336 ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 395
Query: 276 LVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
S G+ N+ T+ GV+ A +G+ IH V + GL D F + L+DMYS+ G
Sbjct: 396 EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 455
Query: 335 LKDARTLFEITRIKNVASWNAMIGCY--GKHG----MVDSSIELFERMLEEG-----MRA 383
+ A +F +++ +WN MI Y +H ++ ++ ER + +G ++
Sbjct: 456 IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 515
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFR-SMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
N +TL+++L +C+ + KG EI ++K ++ + +VDM + G + +
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG--SALVDMYAKCGCLQMSRK 573
Query: 443 LLRQVP 448
+ Q+P
Sbjct: 574 VFDQIP 579
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 180/360 (50%), Gaps = 47/360 (13%)
Query: 94 FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND-VSVGN 152
+EA+ + M + + + F +LKA L D++ GKQ+HA + G+ D V+V N
Sbjct: 78 LREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVAN 137
Query: 153 ALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEP 212
L+++Y KCG + +VF + ER+ VSW S+IS C+ K + A+ F M E +EP
Sbjct: 138 TLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEP 197
Query: 213 NQFTYNAIIASYA-------------------RRGDSN--------AAFAFFSRMTAEGF 245
+ FT +++ + + R+G+ N A + ++ +
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKV 257
Query: 246 V------PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGS 299
+ DLVTWN ++S Q+++ EAL+ + M++ G++P+ T++ VL A
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 300 IQIGREIHALVCRMG-LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++ G+E+HA + G L + F GSAL+DMY C + R +F+ + + WNAMI
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 359 CYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACS-----------HGGLVEKGLE 406
Y ++ ++ LF M E G+ AN T+ V+ AC HG +V++GL+
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 208/456 (45%), Gaps = 60/456 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTN---DLNIFSLKSKLVGVYAGCGDVNSARLVFDK 72
+ +L C + LR GK++HA N D N F + S LV +Y C V S R VFD
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGRRVFDG 363
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI-YRCNKFTFSIVLKACVGLLDIKK 131
+ + + + N M+ + + +EA+ F M E N T + V+ ACV +
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
+ +H + G + D V N L+DMYS+ G + A R+F M +RD+V+W +MI+GY
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 192 VSKVDEAVVLFERMK-LE----------GLEPNQFTYNAIIASYA-----RRGDSNAAFA 235
++A++L +M+ LE L+PN T I+ S A +G A+A
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543
Query: 236 FFSRMTAEGFV--------------------------PDLVTWNAMISGFAQSKRENEAL 269
+ + + V +++TWN +I + EA+
Sbjct: 544 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 603
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDM 328
L + M+V G+KPN VT V A +G + G R + + G+ + ++D+
Sbjct: 604 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL 663
Query: 329 YSKCGSLKDARTLFEITR--IKNVASWNAMIGCYGKHGMVD----SSIELFERMLEEGMR 382
+ G +K+A L + +W++++G H ++ ++ L + LE +
Sbjct: 664 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ--LEPNVA 721
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
++ V L ++ S+ GL +K E+ R+MKE+ GV+
Sbjct: 722 SHYVLLANIYSS---AGLWDKATEVRRNMKEQ-GVR 753
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 1/152 (0%)
Query: 252 WNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
W ++ +S EA+ + M+V GIKP+N +L+A +++G++IHA V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 312 RMGLHIDVFT-GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSI 370
+ G +D T + L+++Y KCG +F+ +N SWN++I + ++
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E F ML+E + + TL+SV++ACS+ + E
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/549 (32%), Positives = 283/549 (51%), Gaps = 43/549 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCT--NDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPN 75
LL C + QVHA D N F ++ + L+ Y ++ A ++F++IP
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+ N ++ G + E+I F MR+ ++ + FTFS VLKA VGL D G+Q+
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
HA++ GF D SVGN ++D YSK + R +F M E D VS+ +IS Y +
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 196 DEAVVLFERMKLEGLEPNQFTY-----------------------------------NAI 220
+ ++ F M+ G + F + N++
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSL 392
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
+ YA+ A F + V+W A+ISG+ Q LKLF M S +
Sbjct: 393 VDMYAKCEMFEEAELIFKSLPQRT----TVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
+ + T VL+A S+ +G+++HA + R G +VF+GS L+DMY+KCGS+KDA
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQ 508
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+FE +N SWNA+I + +G +++I F +M+E G++ + V+++ VL+ACSH G
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGF 568
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
VE+G E F++M YG+ K+HYAC++D+L R+GR EA L+ ++P M +
Sbjct: 569 VEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Query: 461 NGCNIHGRRDLAVTMGEEFFEM-GLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
N C IH + LA E+ F M LR +V +SNI AA GEW + +++K M+E+ ++
Sbjct: 629 NACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688
Query: 520 KQPGFSRVE 528
K P +S VE
Sbjct: 689 KVPAYSWVE 697
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 200/438 (45%), Gaps = 50/438 (11%)
Query: 53 LVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYR 110
++ + GDV+SAR +FD +P+ V + W ++ + N F EA F L R+
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTV--VTWTILMGWYARNSHFDEA---FKLFRQMCRS 139
Query: 111 C-----NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND--VSVGNALIDMYSKCGL 163
+ TF+ +L C + QVHA A ++GF+ + ++V N L+ Y +
Sbjct: 140 SSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRR 199
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
L A +F + E+D V++ ++I+GY E++ LF +M+ G +P+ FT++ ++ +
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 224 YARRGD----------------------SNAAFAFFSR---------MTAEGFVPDLVTW 252
D N F+S+ + E D V++
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N +IS ++Q+ + +L F+ M G N +L S+Q+GR++H
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
+ G++L+DMY+KC ++A +F+ + SW A+I Y + G+ + ++L
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 373 FERMLEEGMRANEVTLISVLSACSHGG--LVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
F +M +RA++ T +VL A + L+ K L F R G + + +VDM
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFII---RSGNLENVFSGSGLVDM 496
Query: 431 LCRSGRMVEAYDLLRQVP 448
+ G + +A + ++P
Sbjct: 497 YAKCGSIKDAVQVFEEMP 514
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 164/388 (42%), Gaps = 58/388 (14%)
Query: 128 DIKKGKQVHA---VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTS 184
D+ + QV A V +M +N VS N +I + K G + SAR +F M +R VV+WT
Sbjct: 57 DLLRRGQVSAARKVYDEMPHKNTVST-NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTI 115
Query: 185 MISGYCNVSKVDEAVVLFERM--------------------------------------K 206
++ Y S DEA LF +M K
Sbjct: 116 LMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVK 175
Query: 207 LEGLEPNQF--TYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
L G + N F N ++ SY + A F + + D VT+N +I+G+ +
Sbjct: 176 L-GFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK----DSVTFNTLITGYEKDGL 230
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
E++ LF M SG +P++ T +GVL+A +G+++HAL G D G+
Sbjct: 231 YTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQ 290
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
++D YSK + + R LF+ + S+N +I Y + ++S+ F M G
Sbjct: 291 ILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRR 350
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA-CVVDMLCRSGRMVEAYDL 443
++LS ++ ++ G ++ + S H +VDM + EA +
Sbjct: 351 NFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFEEAELI 408
Query: 444 LRQVPMYVTNS----MAGAFRNGCNIHG 467
+ +P T S ++G + G +HG
Sbjct: 409 FKSLPQRTTVSWTALISGYVQKG--LHG 434
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 117/266 (43%), Gaps = 43/266 (16%)
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
++V A + GF+ D N +++ + G + +AR+V+ M ++ VS +MISG+
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRM--TAEGFVPDLV 250
V A LF+ M + T+ ++ YAR + AF F +M ++ +PD V
Sbjct: 93 GDVSSARDLFDAMP----DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 251 TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALV 310
T+ ++ G N+A+ P N +G ++HA
Sbjct: 149 TFTTLLPGC------NDAV------------PQNA----------------VG-QVHAFA 173
Query: 311 CRMGLHIDVF--TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDS 368
++G + F + L+ Y + L A LFE K+ ++N +I Y K G+
Sbjct: 174 VKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTE 233
Query: 369 SIELFERMLEEGMRANEVTLISVLSA 394
SI LF +M + G + ++ T VL A
Sbjct: 234 SIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
R + A + + G D + +++ + G + AR +++ KN S N MI + K
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
G V S+ +LF+ M + + VT ++ + ++ ++FR M
Sbjct: 93 GDVSSARDLFDAMPDRTV----VTWTILMGWYARNSHFDEAFKLFRQM 136
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 305 bits (781), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 293/551 (53%), Gaps = 45/551 (8%)
Query: 31 QGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
Q KQ+HA L L FS L +KL+ + GD+ AR VFD +P P +F N ++
Sbjct: 36 QLKQIHARLLVLGLQ-FSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 94
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
+ +FQ+A+ +S M+ + FTF +LKAC GL ++ G+ VHA ++GF+ DV
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 149 SVGNALIDMYSKCGLLCSARRVFHG--MFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
V N LI +Y+KC L SAR VF G + ER +VSWT+++S Y + EA+ +F +M+
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 207 LEGLEP---------NQFTY-------NAIIAS-------------------YARRGDSN 231
++P N FT +I AS YA+ G
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A F +M + P+L+ WNAMISG+A++ EA+ +F M+ ++P+ +++T +
Sbjct: 275 TAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A GS++ R ++ V R DVF SALIDM++KCGS++ AR +F+ T ++V
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
W+AMI YG HG +I L+ M G+ N+VT + +L AC+H G+V +G F M
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 450
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
+ + + ++HYACV+D+L R+G + +AY++++ +P+ ++ GA + C H +L
Sbjct: 451 AD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVEL 509
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRN 531
++ F + +V LSN+ AA W +R MKEK + K G S VE R
Sbjct: 510 GEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRG 569
Query: 532 EFVEKEVQNES 542
V ++S
Sbjct: 570 RLEAFRVGDKS 580
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 137/264 (51%), Gaps = 5/264 (1%)
Query: 29 LRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+QG+ +HA + L I L L +YA CG V +A+++FDK+ +PN+ + N M+
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
A G +EAI F M R + + + + AC + +++ + ++ + + +D
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V + +ALIDM++KCG + AR VF +RDVV W++MI GY + EA+ L+ M+
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
G+ PN T+ ++ + G + FF+RM P + +I ++ ++
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQ 477
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVL 291
A ++ K M V +P VTV G L
Sbjct: 478 AYEVIKCMPV---QP-GVTVWGAL 497
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 301 bits (772), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 287/552 (51%), Gaps = 40/552 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C S L G Q H+++ L N+F + + LV +YA CG + AR +F+++ +
Sbjct: 434 LLSTCAASHDLEMGSQFHSIIIKKKLAKNLF-VGNALVDMYAKCGALEDARQIFERMCDR 492
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+ N ++ + N EA F M + + LKAC + + +GKQVH
Sbjct: 493 DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH 552
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
++ + G + D+ G++LIDMYSKCG++ AR+VF + E VVS ++I+GY + ++
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLE 611
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD-------- 248
EAVVLF+ M G+ P++ T+ I+ + + F ++T GF +
Sbjct: 612 EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISL 671
Query: 249 -------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+V W M+SG +Q+ EALK +K M G+ P+
Sbjct: 672 LGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPD 731
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF- 342
T VL+ + S++ GR IH+L+ + +D T + LIDMY+KCG +K + +F
Sbjct: 732 QATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFD 791
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
E+ R NV SWN++I Y K+G + ++++F+ M + + +E+T + VL+ACSH G V
Sbjct: 792 EMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVS 851
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
G +IF M +YG++ +H AC+VD+L R G + EA D + + + +
Sbjct: 852 DGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGA 911
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IHG E+ E+ + +V+LSNI A+ G W +A LRK+M+++ V+K P
Sbjct: 912 CRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVP 971
Query: 523 GFS--RVEKRNE 532
G+S VE+R
Sbjct: 972 GYSWIDVEQRTH 983
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 219/425 (51%), Gaps = 15/425 (3%)
Query: 28 ALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
ALR GK VH+ L I S L + +V +YA C V+ A FD + +V N M
Sbjct: 75 ALRIGKAVHSKSLI--LGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSM 131
Query: 85 VMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ + G + + F + E NKFTFSIVL C +++ G+Q+H +MG
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
E + G AL+DMY+KC + ARRVF + + + V WT + SGY +EAV++FER
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 205 MKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
M+ EG P+ + +I +Y R G A F M++ PD+V WN MISG +
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGC 307
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
E A++ F M S +K T+ VL A G+ ++ +G +HA ++GL +++ GS+
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+ MYSKC ++ A +FE KN WNAMI Y +G +ELF M G +
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNID 427
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYA--CVVDMLCRSGRMVEAYD 442
+ T S+LS C+ +E G + + ++ K++K + +VDM + G + +A
Sbjct: 428 DFTFTSLLSTCAASHDLEMGSQFHSIIIKK---KLAKNLFVGNALVDMYAKCGALEDARQ 484
Query: 443 LLRQV 447
+ ++
Sbjct: 485 IFERM 489
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 220/460 (47%), Gaps = 49/460 (10%)
Query: 45 NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM 104
NI+ + S LV +Y+ C + +A VF+ + N N M+ A G + + F M
Sbjct: 361 NIY-VGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 105 REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLL 164
+ Y + FTF+ +L C D++ G Q H++ + ++ VGNAL+DMY+KCG L
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 165 CSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL----------------- 207
AR++F M +RD V+W ++I Y EA LF+RM L
Sbjct: 480 EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Query: 208 ------------------EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDL 249
GL+ + T +++I Y++ G A FS + +
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWS----V 595
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
V+ NA+I+G++Q+ E EA+ LF+ ML G+ P+ +T +++A S+ +G + H
Sbjct: 596 VSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQ 654
Query: 310 VCRMGLHID-VFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVD 367
+ + G + + G +L+ MY + +A LF E++ K++ W M+ + ++G +
Sbjct: 655 ITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYE 714
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
+++ ++ M +G+ ++ T ++VL CS + +G I S+ + + +
Sbjct: 715 EALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI-HSLIFHLAHDLDELTSNTL 773
Query: 428 VDMLCRSGRM---VEAYDLLRQVPMYVT-NSMAGAF-RNG 462
+DM + G M + +D +R+ V+ NS+ + +NG
Sbjct: 774 IDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG 813
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 139/273 (50%), Gaps = 15/273 (5%)
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMI 186
L ++ GK VH+ + +G +++ +GNA++D+Y+KC + A + F E+DV +W SM+
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSML 132
Query: 187 SGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV 246
S Y ++ K + + F + + PN+FT++ ++++ AR + M G
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
+ A++ +A+ R ++A ++F+ + + PN V T + +G ++ G
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI----VDPNTVCWTCL-----FSGYVKAGLPE 243
Query: 307 HALVC--RM---GLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
A++ RM G D +I+ Y + G LKDAR LF +V +WN MI +G
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHG 303
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
K G +IE F M + +++ TL SVLSA
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 288/557 (51%), Gaps = 43/557 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L KC L Q KQ+HA + +L+ + KL+ + C N A VF+++ PNV
Sbjct: 26 LPKCAN---LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
+ N ++ A A +A FS M+ F + FT+ +LKAC G + K +H
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 139 ATQMGFENDVSVGNALIDMYSKC---------------------------------GLLC 165
++G +D+ V NALID YS+C G L
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
ARR+F M +RD++SW +M+ GY ++ +A LFE+M E N +++ ++ Y+
Sbjct: 203 DARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP----ERNTVSWSTMVMGYS 258
Query: 226 RRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
+ GD A F +M ++VTW +I+G+A+ EA +L M+ SG+K +
Sbjct: 259 KAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
V +L A +G + +G IH+++ R L + + +AL+DMY+KCG+LK A +F
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI 376
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
K++ SWN M+ G HG +IELF RM EG+R ++VT I+VL +C+H GL+++G+
Sbjct: 377 PKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGI 436
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
+ F SM++ Y + EHY C+VD+L R GR+ EA +++ +PM + GA C +
Sbjct: 437 DYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRM 496
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
H D+A + + ++ P + +LSNI AA +W ++R MK V+K G S
Sbjct: 497 HNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGAS 556
Query: 526 RVEKRNEFVEKEVQNES 542
VE + E V ++S
Sbjct: 557 SVELEDGIHEFTVFDKS 573
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 299 bits (766), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 284/556 (51%), Gaps = 44/556 (7%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVF 70
N L L+ C L +G+Q+HA T L S ++ L+ +YA C D+ +A F
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAY--TTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 71 DKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK 130
+ NV + N M++A + + + F M+ N++T+ +LK C+ L D++
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
G+Q+H+ + F+ + V + LIDMY+K G L +A + +DVVSWT+MI+GY
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 191 NVSKVDEAVVLFERM--------------------KLEGLEPNQFTY------------- 217
+ D+A+ F +M L+ L+ Q +
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
NA++ Y+R G ++ F + A D + WNA++SGF QS EAL++F M
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEA----GDNIAWNALVSGFQQSGNNEEALRVFVRM 683
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
GI NN T ++A T +++ G+++HA++ + G + +ALI MY+KCGS+
Sbjct: 684 NREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSI 743
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
DA F KN SWNA+I Y KHG +++ F++M+ +R N VTL+ VLSAC
Sbjct: 744 SDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSAC 803
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSM 455
SH GLV+KG+ F SM YG+ EHY CVVDML R+G + A + ++++P+ +
Sbjct: 804 SHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALV 863
Query: 456 AGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKE 515
+ C +H ++ E+ +V+LSN+ A +W + R+ MKE
Sbjct: 864 WRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKE 923
Query: 516 KNVQKQPGFSRVEKRN 531
K V+K+PG S +E +N
Sbjct: 924 KGVKKEPGQSWIEVKN 939
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 223/471 (47%), Gaps = 51/471 (10%)
Query: 16 LDCLLGKCMKSK-ALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKI 73
L LL C+K+ +L +G+++H+ + L+ L KL Y GD+ A VFD++
Sbjct: 87 LKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEM 146
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVG---LLDIK 130
P +F N M+ A E G F M N+ TFS VL+AC G D+
Sbjct: 147 PERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV 206
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
+Q+HA G + V N LID+YS+ G + ARRVF G+ +D SW +MISG
Sbjct: 207 --EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 264
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTY--------------------------------- 217
EA+ LF M + G+ P + +
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324
Query: 218 --NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
NA+++ Y G+ +A FS M+ D VT+N +I+G +Q +A++LFK M
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQR----DAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSL 335
+ G++P++ T+ ++ A G++ G+++HA ++G + AL+++Y+KC +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 336 KDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
+ A F T ++NV WN M+ YG + +S +F +M E + N+ T S+L C
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 396 SHGGLVEKGLEIFRSMKERYGVKISKEHYAC--VVDMLCRSGRMVEAYDLL 444
G +E G +I + + Y C ++DM + G++ A+D+L
Sbjct: 501 IRLGDLELGEQIHSQIIK---TNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 213/453 (47%), Gaps = 45/453 (9%)
Query: 33 KQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT 91
+Q+HA + L ++ + L+ +Y+ G V+ AR VFD + + +W+ M S +
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD--HSSWVAMISGLS 264
Query: 92 GNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
N EAI F M + FS VL AC + ++ G+Q+H + ++GF +D
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
V NAL+ +Y G L SA +F M +RD V++ ++I+G ++A+ LF+RM L+G
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 384
Query: 210 LEPNQFTYNAIIAS-----------------------------------YARRGDSNAAF 234
LEP+ T +++ + YA+ D A
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
+F E V ++V WN M+ + + ++F+ M + I PN T +L+
Sbjct: 445 DYF----LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
G +++G +IH+ + + ++ + S LIDMY+K G L A + K+V SW
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER 414
MI Y ++ D ++ F +ML+ G+R++EV L + +SAC+ +++G +I +
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACV 619
Query: 415 YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
G +V + R G++ E+Y Q
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 652
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 161/338 (47%), Gaps = 47/338 (13%)
Query: 110 RCNKFTFSIVLKACV---GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCS 166
R N T +L+ C+ G LD +G+++H+ ++G +++ + L D Y G L
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLD--EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 167 ARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------- 217
A +VF M ER + +W MI + + + E LF RM E + PN+ T+
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 218 ---------------------------NAIIASYARRGDSNAAFAFFSRMTAEGF-VPDL 249
N +I Y+R G F +R +G + D
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNG-----FVDLARRVFDGLRLKDH 253
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
+W AMISG ++++ E EA++LF M V GI P + VL A S++IG ++H L
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
V ++G D + +AL+ +Y G+L A +F ++ ++N +I + G + +
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEI 407
+ELF+RM +G+ + TL S++ ACS G + +G ++
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 279 GIKPNNVTVTGVLQAGGLT-GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
GI+PN+ T+ +L+ T GS+ GR++H+ + ++GL + L D Y G L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
A +F+ + + +WN MI ++ LF RM+ E + NE T VL AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
G + +E + G++ S ++D+ R+G + DL R+V
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV----DLARRV 244
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 296 bits (758), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 276/504 (54%), Gaps = 48/504 (9%)
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ +VF N ++ A +G+ EA+ FS MR+ + +F +KAC L DI G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
KQ H A G+++D+ V +ALI MYS CG L AR+VF + +R++VSWTSMI GY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 193 SKVDEAVVLFE----------------------------RMKLEGLEPNQFTY------- 217
+AV LF+ R+ +GL + ++
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 218 ------NAIIASYARRGDSNAAFA--FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
N ++ +YA+ G+ A A F ++ + D V++N+++S +AQS NEA
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK----DRVSYNSIMSVYAQSGMSNEAF 271
Query: 270 KLFKGMLVSGIKP-NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDM 328
++F+ ++ + + N +T++ VL A +G+++IG+ IH V RMGL DV G+++IDM
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 329 YSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL 388
Y KCG ++ AR F+ + KNV SW AMI YG HG ++ELF M++ G+R N +T
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP 448
+SVL+ACSH GL +G F +MK R+GV+ EHY C+VD+L R+G + +AYDL++++
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451
Query: 449 MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAEN 508
M + + + C IH +LA FE+ +++LS+I A G W + E
Sbjct: 452 MKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVER 511
Query: 509 LRKIMKEKNVQKQPGFSRVEKRNE 532
+R IMK + + K PGFS +E E
Sbjct: 512 VRMIMKNRGLVKPPGFSLLELNGE 535
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 181/412 (43%), Gaps = 63/412 (15%)
Query: 18 CLLGKCMKSKALRQGKQVH--ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
C + C + GKQ H A + +IF + S L+ +Y+ CG + AR VFD+IP
Sbjct: 81 CAIKACSSLFDIFSGKQTHQQAFVFGYQSDIF-VSSALIVMYSTCGKLEDARKVFDEIPK 139
Query: 76 PNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNK-----FTFSI----VLKACVGL 126
N+ M+ GN +A+ SL ++ + N F S+ V+ AC +
Sbjct: 140 RNIVSWTSMIRGYDLNGNALDAV---SLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 127 LDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGL--LCSARRVFHGMFERDVVSWTS 184
+ +H+ + GF+ VSVGN L+D Y+K G + AR++F + ++D VS+ S
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 185 MISGYCNVSKVDEAVVLFERMKLE------------------------------------ 208
++S Y +EA +F R+
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
GLE + +II Y + G A F RM + ++ +W AMI+G+ +A
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK----NVRSWTAMIAGYGMHGHAAKA 372
Query: 269 LKLFKGMLVSGIKPNNVTVTGVLQAGGLTG-SIQIGREIHALVCRMGLHIDVFTGSALID 327
L+LF M+ SG++PN +T VL A G ++ R +A+ R G+ + ++D
Sbjct: 373 LELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVD 432
Query: 328 MYSKCGSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVD----SSIELFE 374
+ + G L+ A L + ++K + W++++ H V+ S LFE
Sbjct: 433 LLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFE 484
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 296 bits (757), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 305/612 (49%), Gaps = 102/612 (16%)
Query: 19 LLGKCMKSK-ALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
LL C+KSK + + VHA + + N ++++L+ Y+ CG + R VFDK+P
Sbjct: 25 LLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR 84
Query: 77 NVFMLN-----------------------------WMVMASAFTGN--FQEAIGYFSLMR 105
N++ N W M S F + +EA+ YF++M
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 106 EFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLC 165
+ + N+++F+ VL AC GL D+ KG QVH++ + F +DV +G+AL+DMYSKCG +
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204
Query: 166 SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA 225
A+RVF M +R+VVSW S+I+ + EA+ +F+ M +EP++ T ++I++ A
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264
Query: 226 R--------------------RGD---SNA---AFAFFSRMTAEGFVPD----------- 248
R D SNA +A SR+ F+ D
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 249 --------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
+V+WNA+I+G+ Q+ EAL LF + + P
Sbjct: 325 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCP 384
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHI------DVFTGSALIDMYSKCGSLK 336
+ + +L+A + +G + H V + G D+F G++LIDMY KCG ++
Sbjct: 385 THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVE 444
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
+ +F ++ SWNAMI + ++G + ++ELF MLE G + + +T+I VLSAC
Sbjct: 445 EGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
H G VE+G F SM +GV ++HY C+VD+L R+G + EA ++ ++PM + +
Sbjct: 505 HAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIW 564
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
G+ C +H L + E+ E+ +V+LSN+ A G+W + N+RK M+++
Sbjct: 565 GSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKE 624
Query: 517 NVQKQPGFSRVE 528
V KQPG S ++
Sbjct: 625 GVTKQPGCSWIK 636
Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 176/370 (47%), Gaps = 51/370 (13%)
Query: 116 FSIVLKACV-GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM 174
F+ +L +C+ L + VHA + GF N++ + N LID YSKCG L R+VF M
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 175 FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAF 234
+R++ +T+N+++ + G + A
Sbjct: 82 PQRNI-----------------------------------YTWNSVVTGLTKLGFLDEAD 106
Query: 235 AFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
+ F M D TWN+M+SGFAQ R EAL F M G N + VL A
Sbjct: 107 SLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSAC 162
Query: 295 GLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
+ G ++H+L+ + DV+ GSAL+DMYSKCG++ DA+ +F+ +NV SWN
Sbjct: 163 SGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN 222
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF----RS 410
++I C+ ++G ++++F+ MLE + +EVTL SV+SAC+ ++ G E+ ++
Sbjct: 223 SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM---YVTNSMAGAFRNGCNIHG 467
K R + +S VDM + R+ EA + +P+ SM + +
Sbjct: 283 DKLRNDIILSN----AFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 338
Query: 468 RRDLAVTMGE 477
R + M E
Sbjct: 339 ARLMFTKMAE 348
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 150/331 (45%), Gaps = 43/331 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTND--LNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
L ++ C A++ G++VH + ND N L + V +YA C + AR +FD +
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 74 PNPNVF-----------------------------MLNWMVMASAFT--GNFQEAIGYFS 102
P NV +++W + + +T G +EA+ F
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 103 LMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF------ENDVSVGNALID 156
L++ ++F+ +LKAC L ++ G Q H + GF E+D+ VGN+LID
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 157 MYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT 216
MY KCG + VF M ERD VSW +MI G+ +EA+ LF M G +P+ T
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 217 YNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
++++ G +FS MT + G P + M+ ++ EA + + M
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 276 LVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
++P++V +L A + +I +G+ +
Sbjct: 556 ---PMQPDSVIWGSLLAACKVHRNITLGKYV 583
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 295 bits (754), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 271/529 (51%), Gaps = 58/529 (10%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQV-HALLCTNDLNIFSLKSKLVGVYAGCGDV 63
IFP+N + + +C++S + +V H + N + SL L+G+ +
Sbjct: 61 IFPLNKI--------IARCVRSGDIDGALRVFHGMRAKNTITWNSL---LIGISKDPSRM 109
Query: 64 NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
A +FD+IP P+ F N M+ NF++A +F
Sbjct: 110 MEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFD--------------------- 148
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+M F+ D + N +I Y++ G + AR +F+ M E++ VSW
Sbjct: 149 -----------------RMPFK-DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWN 190
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE 243
+MISGY +++A F+ + G+ + A+I Y + A A F MT
Sbjct: 191 AMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKKVELAEAMFKDMTVN 246
Query: 244 GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIG 303
+LVTWNAMISG+ ++ R + LKLF+ ML GI+PN+ ++ L ++Q+G
Sbjct: 247 K---NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLG 303
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
R+IH +V + L DV ++LI MY KCG L DA LFE+ + K+V +WNAMI Y +H
Sbjct: 304 RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQH 363
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
G D ++ LF M++ +R + +T ++VL AC+H GLV G+ F SM Y V+ +H
Sbjct: 364 GNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH 423
Query: 424 YACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMG 483
Y C+VD+L R+G++ EA L+R +P ++ G C +H +LA E+ ++
Sbjct: 424 YTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLN 483
Query: 484 LRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+ G+V L+NI A+ W + +RK MKE NV K PG+S +E RN+
Sbjct: 484 SQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNK 532
>sp|Q9LT48|PP244_ARATH Pentatricopeptide repeat-containing protein At3g20730
OS=Arabidopsis thaliana GN=PCMP-E94 PE=2 SV=1
Length = 565
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 182/537 (33%), Positives = 287/537 (53%), Gaps = 44/537 (8%)
Query: 29 LRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMAS 88
L G + C+N LK L+ +Y GDV AR +FD+I +V ++W M S
Sbjct: 34 LIHGNSITNGFCSN----LQLKDMLIDLYLKQGDVKHARKLFDRISKRDV--VSWTAMIS 87
Query: 89 AFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
F+ G +A+ F M + N+FT+ VLK+C L +K+G Q+H +
Sbjct: 88 RFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAG 147
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
++ V +AL+ +Y++CG + AR F M ERD+VSW +MI GY + D + LF+ M
Sbjct: 148 NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLML 207
Query: 207 LEGLEPNQFTYNAII--------------------------ASYARRGDSNAAFAFFSRM 240
EG +P+ FT+ +++ +S R NA S
Sbjct: 208 TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLA 267
Query: 241 TA----EGFVP-DLVTWNAMISGFAQSKR-ENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
A EG DL++ A+I+GF+Q ++A +FK M+ K + V V+ +L+
Sbjct: 268 NAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKIC 327
Query: 295 GLTGSIQIGREIHALVCRMG-LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASW 353
S+ IGR+IH + + DV G++LIDMY+K G ++DA FE + K+V SW
Sbjct: 328 TTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSW 387
Query: 354 NAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKE 413
++I YG+HG + +I+L+ RM E ++ N+VT +S+LSACSH G E G +I+ +M
Sbjct: 388 TSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMIN 447
Query: 414 RYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVP--MYVTNSMAGAFRNGCNIHGRRDL 471
++G++ +EH +C++DML RSG + EAY L+R + +++S GAF + C HG L
Sbjct: 448 KHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQL 507
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK-NVQKQPGFSRV 527
+ + M RKP ++ L+++ AA+G W A N RK+MKE + K PG+S V
Sbjct: 508 SKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 564
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/536 (31%), Positives = 285/536 (53%), Gaps = 38/536 (7%)
Query: 31 QGKQVHALLCTNDLN-IFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
+G QVH ++ N L+ + + L+ +Y CG+V AR++FDK +V N M+ A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVS 149
G EA+G F MR R ++ +F+ V+K C L +++ +Q+H + GF D +
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 150 VGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
+ AL+ YSKC + A R+F + +VVSWT+MISG+ +EAV LF MK +
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 209 GLEPNQFTYN-------------------------------AIIASYARRGDSNAAFAFF 237
G+ PN+FTY+ A++ +Y + G A F
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
S + + D+V W+AM++G+AQ+ A+K+F + GIKPN T + +L T
Sbjct: 452 SGIDDK----DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Query: 298 -GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAM 356
S+ G++ H + L + SAL+ MY+K G+++ A +F+ R K++ SWN+M
Sbjct: 508 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 567
Query: 357 IGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYG 416
I Y +HG ++++F+ M + ++ + VT I V +AC+H GLVE+G + F M
Sbjct: 568 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 627
Query: 417 VKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMG 476
+ +KEH +C+VD+ R+G++ +A ++ +P +++ C +H + +L
Sbjct: 628 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAA 687
Query: 477 EEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
E+ M +V+LSN+ A G+W E +RK+M E+NV+K+PG+S +E +N+
Sbjct: 688 EKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNK 743
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 219/478 (45%), Gaps = 46/478 (9%)
Query: 61 GDVNSARL-----VFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFT 115
G V+S+RL +FDK P + ++ + G QEA F + +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
FS VLK L D G+Q+H + GF +DVSVG +L+D Y K R+VF M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFA 235
ER+VV+WT++ISGY S DE + LF RM+ EG +PN FT+ A + A G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 236 FFSRMTAEGF-------------------------------VPDLVTWNAMISGFAQSKR 264
+ + G V +VTWN+MISG+A +
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+ EAL +F M ++ ++ + + V++ ++ ++H V + G D +A
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 325 LIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
L+ YSKC ++ DA LF EI + NV SW AMI + ++ + +++LF M +G+R
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
NE T +L+A E ++ ++ ER S ++D + G++ EA +
Sbjct: 396 NEFTYSVILTALPVISPSEVHAQVVKTNYER-----SSTVGTALLDAYVKLGKVEEAAKV 450
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICAA 499
+ + + A G G + A+ M E + G+ KP+ F S N+CAA
Sbjct: 451 FSGIDDKDIVAWS-AMLAGYAQTGETEAAIKMFGELTKGGI-KPNEFTFSSILNVCAA 506
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 195/404 (48%), Gaps = 49/404 (12%)
Query: 32 GKQVH-ALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
G+Q+H + L+ S+ + LV Y + R VFD++ NV + W + S +
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV--VTWTTLISGY 169
Query: 91 TGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIK----KGKQVHAVATQMGF 144
N E + F M+ + N FTF+ A +G+L + +G QVH V + G
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGTQPNSFTFA----AALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
+ + V N+LI++Y KCG + AR +F + VV+W SMISGY EA+ +F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 205 MKLEGLEPNQFTYNAII-------------------ASYARRGDSNAAFAF---FSRMTA 242
M+L + ++ ++ ++I Y D N A +S+ TA
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 243 E----------GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQ 292
G V ++V+W AMISGF Q+ + EA+ LF M G++PN T + +L
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 293 AGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS 352
A + E+HA V + G+AL+D Y K G +++A +F K++ +
Sbjct: 406 ALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461
Query: 353 WNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
W+AM+ Y + G +++I++F + + G++ NE T S+L+ C+
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 292 bits (748), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 180/558 (32%), Positives = 284/558 (50%), Gaps = 58/558 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LL KC+ LRQ Q LL + + F L+ GD N + +F PN
Sbjct: 43 LLKKCISVNQLRQ-IQAQMLLHSVEKPNF-----LIPKAVELGDFNYSSFLFSVTEEPNH 96
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIY---RCNKFTFSIVLKACVGLLDIKKGKQV 135
+ N+M+ T N EA SL R + + +KFT++ V AC L +I G+ V
Sbjct: 97 YSFNYMIRGLTNTWNDHEAA--LSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSV 154
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H+ ++G E DV + ++LI MY+KCG + AR++F + ERD VSW SMISGY
Sbjct: 155 HSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYA 214
Query: 196 DEAVVLFERMKLEGLEPNQ-----------------------------------FTYNAI 220
+A+ LF +M+ EG EP++ F + +
Sbjct: 215 KDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKL 274
Query: 221 IASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
I+ Y + GD ++A F++M + D V W AMI+ ++Q+ + +EA KLF M +G+
Sbjct: 275 ISMYGKCGDLDSARRVFNQMIKK----DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 330
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDART 340
P+ T++ VL A G G++++G++I + L +++ + L+DMY KCG +++A
Sbjct: 331 SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 390
Query: 341 LFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGL 400
+FE +KN A+WNAMI Y G ++ LF+RM + +++T I VLSAC H GL
Sbjct: 391 VFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGL 447
Query: 401 VEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFR 460
V +G F M +G+ EHY ++D+L R+G + EA++ + + P M A
Sbjct: 448 VHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAIL 507
Query: 461 NGCNIHGRRDLAVTMG--EEFFEMGLRKPDG-FVMLSNICAADGEWHEAENLRKIMKEKN 517
C H R+D+A+ EM K G +V+ SN+ A W E+ +R +M+++
Sbjct: 508 GAC--HKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRG 565
Query: 518 VQKQPGFSRVEKRNEFVE 535
V K PG S +E E +E
Sbjct: 566 VVKTPGCSWIEIEGELME 583
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 292 bits (747), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 180/549 (32%), Positives = 283/549 (51%), Gaps = 40/549 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C L GKQ+HA + L + SL + L+ Y CG V +A +F+ +P
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 75 NPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
N N+ ++W + S + N +EA+ F+ M +F + + + S +L +C L + G
Sbjct: 312 NKNI--ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFG 369
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
QVHA + ND V N+LIDMY+KC L AR+VF DVV + +MI GY +
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRL 429
Query: 193 S---KVDEAVVLFERMKLEGLEPNQFTYNAII---ASYARRGDSNAAFAFF--------- 237
++ EA+ +F M+ + P+ T+ +++ AS G S
Sbjct: 430 GTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDI 489
Query: 238 ------------------SRMT-AEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
SR+ E V DLV WN+M +G+ Q EAL LF + +S
Sbjct: 490 FAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLS 549
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+P+ T ++ A G S+Q+G+E H + + GL + + +AL+DMY+KCGS +DA
Sbjct: 550 RERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDA 609
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
F+ ++V WN++I Y HG ++++ E+M+ EG+ N +T + VLSACSH
Sbjct: 610 HKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHA 669
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLVE GL+ F M R+G++ EHY C+V +L R+GR+ +A +L+ ++P + +
Sbjct: 670 GLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRS 728
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
+GC G +LA E + F MLSNI A+ G W EA+ +R+ MK + V
Sbjct: 729 LLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGV 788
Query: 519 QKQPGFSRV 527
K+PG S +
Sbjct: 789 VKEPGRSWI 797
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 233/502 (46%), Gaps = 68/502 (13%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYF-SLMREF 107
L + L+ +Y+ G + AR VF+K+P N+ + MV A G ++E++ F R
Sbjct: 81 LSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTR 140
Query: 108 IYRCNKFTFSIVLKACVGLLDIKKGK----QVHAVATQMGFENDVSVGNALIDMYSKCGL 163
N++ S ++AC GL +G+ Q+ + + GF+ DV VG LID Y K G
Sbjct: 141 KDSPNEYILSSFIQACSGL--DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGN 198
Query: 164 LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE--------------- 208
+ AR VF + E+ V+WT+MISG + + ++ LF ++ +
Sbjct: 199 IDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA 258
Query: 209 --------------------GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD 248
GLE + N +I SY + G AA F+ M + +
Sbjct: 259 CSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK----N 314
Query: 249 LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHA 308
+++W ++SG+ Q+ EA++LF M G+KP+ + +L + ++ G ++HA
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA 374
Query: 309 LVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGM--- 365
+ L D + ++LIDMY+KC L DAR +F+I +V +NAMI Y + G
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWE 434
Query: 366 VDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL-EIFRSMKERYGVKISKEHY 424
+ ++ +F M +R + +T +S+L A + L GL + + +YG+ +
Sbjct: 435 LHEALNIFRDMRFRLIRPSLLTFVSLLRASA--SLTSLGLSKQIHGLMFKYGLNLDIFAG 492
Query: 425 ACVVDMLC-----RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEF 479
+ ++D+ + R+V +D ++ + + NSM + + A+ + F
Sbjct: 493 SALIDVYSNCYCLKDSRLV--FDEMKVKDLVIWNSMFAGYVQ----QSENEEALNL---F 543
Query: 480 FEMGL--RKPDGFVMLSNICAA 499
E+ L +PD F + + AA
Sbjct: 544 LELQLSRERPDEFTFANMVTAA 565
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 140/298 (46%), Gaps = 38/298 (12%)
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH G E D + N LI++YS+ G + AR+VF M ER++VSW++M+S CN
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA-CNHHG 124
Query: 195 VDEA--VVLFERMKLEGLEPNQFTYNAIIASYA---RRGDSNAAFAFFSRMTAEGFVPDL 249
+ E VV E + PN++ ++ I + + RG F S + GF D+
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW-MVFQLQSFLVKSGFDRDV 183
Query: 250 -------------------------------VTWNAMISGFAQSKRENEALKLFKGMLVS 278
VTW MISG + R +L+LF ++
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
+ P+ ++ VL A + ++ G++IHA + R GL +D + LID Y KCG + A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
LF KN+ SW ++ Y ++ + ++ELF M + G++ + S+L++C+
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 14/246 (5%)
Query: 209 GLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEA 268
GLE + + N +I Y+R G A F +M +LV+W+ M+S E+
Sbjct: 74 GLELDTYLSNILINLYSRAGGMVYARKVFEKMPER----NLVSWSTMVSACNHHGIYEES 129
Query: 269 LKLF-KGMLVSGIKPNNVTVTGVLQA-GGLTGSIQIGR----EIHALVCRMGLHIDVFTG 322
L +F + PN ++ +QA GL G GR ++ + + + G DV+ G
Sbjct: 130 LVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR---GRWMVFQLQSFLVKSGFDRDVYVG 186
Query: 323 SALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMR 382
+ LID Y K G++ AR +F+ K+ +W MI K G S++LF +++E+ +
Sbjct: 187 TLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV 246
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYD 442
+ L +VLSACS +E G +I + RYG+++ ++D + GR++ A+
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHIL-RYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 443 LLRQVP 448
L +P
Sbjct: 306 LFNGMP 311
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 290 bits (743), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 276/552 (50%), Gaps = 40/552 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLC-TNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIP 74
L +L C +S + G+ +HA T+ L+ + S L+ +Y G ++ + VF ++P
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
N ++ G ++E + YFS M + +TF+I LKAC GL +K GK
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA 230
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H GF + V N+L MY++CG + +F M ERDVVSWTS+I Y + +
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ 290
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
+AV F +M+ + PN+ T+ N+
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS 350
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
++ Y+ G+ +A F M D+++W+ +I G+ Q+ E K F M SG
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCR----DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG 406
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
KP + + +L G I+ GR++HAL GL + S+LI+MYSKCGS+K+A
Sbjct: 407 TKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEAS 466
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGG 399
+F T ++ S AMI Y +HG +I+LFE+ L+ G R + VT ISVL+AC+H G
Sbjct: 467 MIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSG 526
Query: 400 LVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
++ G F M+E Y ++ +KEHY C+VD+LCR+GR+ +A ++ ++ + +
Sbjct: 527 QLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTL 586
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQ 519
C G + E E+ V L+NI ++ G EA N+RK MK K V
Sbjct: 587 LIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVI 646
Query: 520 KQPGFSRVEKRN 531
K+PG+S ++ ++
Sbjct: 647 KEPGWSSIKIKD 658
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 221/481 (45%), Gaps = 46/481 (9%)
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFT--FSI 118
G++ +AR VFDK+P+ ++ ++ N EA+ FS MR + + T S+
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
VLKAC +I G+ +HA A + + V VG++L+DMY + G + + RVF M R+
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY--------------------- 217
V+WT++I+G + + E + F M + +T+
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 218 --------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSK 263
N++ Y G+ F M+ D+V+W ++I + +
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER----DVVSWTSLIVAYKRIG 289
Query: 264 RENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS 323
+E +A++ F M S + PN T + A + G ++H V +GL+ + +
Sbjct: 290 QEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSN 349
Query: 324 ALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRA 383
+++ MYS CG+L A LF+ R +++ SW+ +IG Y + G + + F M + G +
Sbjct: 350 SMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKP 409
Query: 384 NEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDL 443
+ L S+LS + ++E G ++ ++ +G++ + + +++M + G + EA +
Sbjct: 410 TDFALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
Query: 444 LRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG--FVMLSNICAADG 501
+ S+ A NG HG+ A+ + E+ ++G R PD F+ + C G
Sbjct: 469 FGETDRDDIVSLT-AMINGYAEHGKSKEAIDLFEKSLKVGFR-PDSVTFISVLTACTHSG 526
Query: 502 E 502
+
Sbjct: 527 Q 527
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 17/219 (7%)
Query: 186 ISGYCNVS------KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
I +C S V+E +V + +PN + I A G+ AA F +
Sbjct: 11 IQRFCTTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINA-----GNLRAARQVFDK 65
Query: 240 MTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV--SGIKPNNVTVTGVLQAGGLT 297
M D+V+W ++I + + +EAL LF M V + P+ ++ VL+A G +
Sbjct: 66 MPH----GDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQS 121
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
+I G +HA + L V+ GS+L+DMY + G + + +F +N +W A+I
Sbjct: 122 SNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAII 181
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
G + F M ++ T L AC+
Sbjct: 182 TGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 290 bits (741), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 172/569 (30%), Positives = 290/569 (50%), Gaps = 44/569 (7%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIP 74
DC+L C + G Q+H L+ + ++ S+K+ L+ +Y+ CG + A +F +
Sbjct: 242 FDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS 301
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ N M+ +G +E++ +F M + TFS +L + +++ KQ
Sbjct: 302 RADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQ 361
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + D+ + +ALID Y KC + A+ +F DVV +T+MISGY +
Sbjct: 362 IHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGL 421
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
+++ +F + + PN+ T A
Sbjct: 422 YIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
+I YA+ G N A+ F R++ D+V+WN+MI+ AQS + A+ +F+ M VSG
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKR----DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSG 537
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
I + V+++ L A S G+ IH + + L DV++ S LIDMY+KCG+LK A
Sbjct: 538 ICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAM 597
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEE-GMRANEVTLISVLSACSHG 398
+F+ + KN+ SWN++I G HG + S+ LF M+E+ G+R +++T + ++S+C H
Sbjct: 598 NVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHV 657
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
G V++G+ FRSM E YG++ +EHYACVVD+ R+GR+ EAY+ ++ +P + G
Sbjct: 658 GDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGT 717
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C +H +LA + ++ +V++SN A EW +R +MKE+ V
Sbjct: 718 LLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREV 777
Query: 519 QKQPGFSRVE--KRNE-FVEKEVQNESKA 544
QK PG+S +E KR FV +V + +
Sbjct: 778 QKIPGYSWIEINKRTHLFVSGDVNHPESS 806
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 224/482 (46%), Gaps = 67/482 (13%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKS-KLVGVYAGCGDVNSARLVFDKIP 74
L LL C LRQGKQVHA L N ++ S +++G+YA CG + +F ++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 75 NPNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKG 132
+ W + S+F N +A+ ++ M F + TF ++KACV L + K
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 133 KQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNV 192
+ + +G + + V ++LI Y + G + ++F + ++D V W M++GY
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTY----------------------------------- 217
+D + F M+++ + PN T+
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
N++++ Y++ G + A F M+ D VTWN MISG+ QS E+L F M+
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRA----DTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
SG+ P+ +T + +L + +++ ++IH + R + +D+F SALID Y KC +
Sbjct: 334 SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 393
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS- 396
A+ +F +V + AMI Y +G+ S+E+F +++ + NE+TL+S+L
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 397 ----------HGGLVEKGLEIFRSMKERYGVKISKEHYAC-VVDMLCRSGRMVEAYDLLR 445
HG +++KG + ++ + C V+DM + GRM AY++
Sbjct: 454 LLALKLGRELHGFIIKKGFD-------------NRCNIGCAVIDMYAKCGRMNLAYEIFE 500
Query: 446 QV 447
++
Sbjct: 501 RL 502
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 141/552 (25%), Positives = 250/552 (45%), Gaps = 53/552 (9%)
Query: 13 VNYLDCLLGKCMKSKALRQGKQVHALLCT-----NDLNIFSLKSKLVGVYAGCGDVNSAR 67
V+ CL+ C+ AL+ K + L T D N F + S L+ Y G ++
Sbjct: 138 VSTFPCLVKACV---ALKNFKGIDFLSDTVSSLGMDCNEF-VASSLIKAYLEYGKIDVPS 193
Query: 68 LVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLL 127
+FD++ + + N M+ A G I FS+MR N TF VL C L
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
I G Q+H + G + + S+ N+L+ MYSKCG A ++F M D V+W MIS
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 188 GYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD--------------SNAA 233
GY ++E++ F M G+ P+ T+++++ S ++ + S +
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 234 FAFFSRMTAEGFVP-----------------DLVTWNAMISGFAQSKRENEALKLFKGML 276
F + + + D+V + AMISG+ + ++L++F+ ++
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
I PN +T+ +L G+ ++++GRE+H + + G G A+IDMY+KCG +
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 337 DARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
A +FE +++ SWN+MI + ++I++F +M G+ + V++ + LSAC+
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 397 HGGLVEKGLEIFRSM-KERYGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVT 452
+ G I M K + E + ++DM + G + A + +++ +
Sbjct: 554 NLPSESFGKAIHGFMIKHSLASDVYSE--STLIDMYAKCGNLKAAMNVFKTMKEKNIVSW 611
Query: 453 NSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAEN-L 509
NS+ A C HG+ ++ + E E +PD L I C G+ E
Sbjct: 612 NSIIAA----CGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFF 667
Query: 510 RKIMKEKNVQKQ 521
R + ++ +Q Q
Sbjct: 668 RSMTEDYGIQPQ 679
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 289 bits (740), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 279/554 (50%), Gaps = 44/554 (7%)
Query: 27 KALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+++ G+Q+H + + S+ + LV Y V+SAR VFD++ +V N ++
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFE 145
G ++ + F M + T V C I G+ VH++ + F
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 146 NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM 205
+ N L+DMYSKCG L SA+ VF M +R VVS+TSMI+GY EAV LFE M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 206 KLEGLEPNQFTY-----------------------------------NAIIASYARRGDS 230
+ EG+ P+ +T NA++ YA+ G
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTG 289
A FS M V D+++WN +I G++++ NEAL LF +L P+ TV
Sbjct: 449 QEAELVFSEMR----VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 504
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKN 349
VL A + GREIH + R G D ++L+DMY+KCG+L A LF+ K+
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 350 VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFR 409
+ SW MI YG HG +I LF +M + G+ A+E++ +S+L ACSH GLV++G F
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 624
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRR 469
M+ ++ + EHYAC+VDML R+G +++AY + +P+ ++ GA GC IH
Sbjct: 625 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 684
Query: 470 DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE- 528
LA + E+ FE+ +V+++NI A +W + + LRK + ++ ++K PG S +E
Sbjct: 685 KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744
Query: 529 --KRNEFVEKEVQN 540
+ N FV + N
Sbjct: 745 KGRVNIFVAGDSSN 758
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 162/538 (30%), Positives = 258/538 (47%), Gaps = 48/538 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C SK+L+ GK+V + N I S L SKL +Y CGD+ A VFD++
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
N ++ A +G+F +IG F M + +TFS V K+ L + G+Q+H
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ GF SVGN+L+ Y K + SAR+VF M ERDV+SW S+I+GY + ++
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 198 AVVLFERMKLEGLEPNQFTY-----------------------------------NAIIA 222
+ +F +M + G+E + T N ++
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 339
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y++ GD ++A A F M+ +V++ +MI+G+A+ EA+KLF+ M GI P
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRS----VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ TVT VL + G+ +H + L D+F +AL+DMY+KCGS+++A +F
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 455
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLV 401
R+K++ SWN +IG Y K+ + ++ LF +LEE +E T+ VL AC+
Sbjct: 456 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 402 EKGLEIF-RSMKERYGVKISKEHYA-CVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAF 459
+KG EI M+ Y S H A +VDM + G ++ A+ L + S
Sbjct: 516 DKGREIHGYIMRNGY---FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWT-VM 571
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENLRKIMKEK 516
G +HG A+ + + + G+ + FV L C+ G E IM+ +
Sbjct: 572 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 190/414 (45%), Gaps = 51/414 (12%)
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
+GN + A+ + + + + T VL+ C +K GK+V GF D ++
Sbjct: 74 SGNLENAVKLLCVSGK--WDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNL 131
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
G+ L MY+ CG L A RVF + + W +++ ++ LF++M G+
Sbjct: 132 GSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGV 191
Query: 211 EPNQFTY-----------------------------------NAIIASYARRGDSNAAFA 235
E + +T+ N+++A Y + ++A
Sbjct: 192 EMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARK 251
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F MT D+++WN++I+G+ + + L +F MLVSGI+ + T+ V
Sbjct: 252 VFDEMTER----DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
+ I +GR +H++ + + + L+DMYSKCG L A+ +F ++V S+ +
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKER- 414
MI Y + G+ +++LFE M EEG+ + T+ +VL+ C+ L+++G + +KE
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 415 --YGVKISKEHYACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAFRNGC 463
+ + +S ++DM + G M EA + +R + N++ G + C
Sbjct: 428 LGFDIFVSN----ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 152/282 (53%), Gaps = 13/282 (4%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C + + L +GK+VH + NDL +IF + + L+ +YA CG + A LVF ++
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIF-VSNALMDMYAKCGSMQEAELVFSEMRVK 461
Query: 77 NVFMLNWMVMASAFTGN--FQEAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGK 133
++ ++W + ++ N EA+ F+L+ E + ++ T + VL AC L KG+
Sbjct: 462 DI--ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
++H + G+ +D V N+L+DMY+KCG L A +F + +D+VSWT MI+GY
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTW 252
EA+ LF +M+ G+E ++ ++ +++ + + G + + FF+ M E + P + +
Sbjct: 580 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 639
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAG 294
++ A++ +A + + M + P + T+ G L G
Sbjct: 640 ACIVDMLARTGDLIKAYRFIENMPI----PPDATIWGALLCG 677
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSG---IKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
N + F +S A+KL + VSG I P T+ VLQ + S++ G+E+
Sbjct: 65 NTQLRRFCESGNLENAVKL---LCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNF 119
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
+ G ID GS L MY+ CG LK+A +F+ +I+ WN ++ K G S
Sbjct: 120 IRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGS 179
Query: 370 IELFERMLEEGMRANEVTLISVLSACS-----HGGLVEKGLEIFRSMKERYGV 417
I LF++M+ G+ + T V + S HGG G + ER V
Sbjct: 180 IGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSV 232
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNIFS---LKSKLVGVYAGCGDVNSARLVFDKIP 74
C+L C A +G+++H + N FS + + LV +YA CG + A ++FD I
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRN--GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 561
Query: 75 NPNVFMLNWMVMASAF--TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIK 130
+ + +++W VM + + G +EAI F+ MR+ ++ +F +L AC GL+D +
Sbjct: 562 SKD--LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD-E 618
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGY 189
+ + + + E V ++DM ++ G L A R M D W +++ G
Sbjct: 619 GWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG- 677
Query: 190 CNVSKVDEAVVLFERM--KLEGLEPNQFTYNAIIAS 223
++ V L E++ K+ LEP Y ++A+
Sbjct: 678 ---CRIHHDVKLAEKVAEKVFELEPENTGYYVLMAN 710
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 289 bits (740), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 294/546 (53%), Gaps = 50/546 (9%)
Query: 23 CMKSKALRQGKQVHALLCTNDLNIF-SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFML 81
C + LR + VH + ++ +L + L+ +Y+ CGD+ S+ +F+KI N +
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNA--V 269
Query: 82 NWMVMASAFT-GNFQE-AIGYFSLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHA 137
+W M S++ G F E A+ FS M + N T VL +C +GL I++GK VH
Sbjct: 270 SWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL--IREGKSVHG 327
Query: 138 VATQMGFE-NDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A + + N S+ AL+++Y++CG L V + +R++V+W S+IS Y + V
Sbjct: 328 FAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVI 387
Query: 197 EAVVLFERMKLEGLEPNQFTY----------------------------------NAIIA 222
+A+ LF +M + ++P+ FT N++I
Sbjct: 388 QALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLID 447
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
Y++ G ++A F+++ +VTWN+M+ GF+Q+ EA+ LF M S ++
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRS----VVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 503
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
N VT V+QA GS++ G+ +H + GL D+FT +ALIDMY+KCG L A T+F
Sbjct: 504 NEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVF 562
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+++ SW++MI YG HG + S+I F +M+E G + NEV ++VLSAC H G VE
Sbjct: 563 RAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVE 622
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
+G F MK +GV + EH+AC +D+L RSG + EAY ++++P S+ G+ NG
Sbjct: 623 EGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQP 522
C IH + D+ + + ++ + +LSNI A +GEW E LR MK N++K P
Sbjct: 682 CRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVP 741
Query: 523 GFSRVE 528
G+S +E
Sbjct: 742 GYSAIE 747
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 142/498 (28%), Positives = 243/498 (48%), Gaps = 50/498 (10%)
Query: 28 ALRQGKQVHA-LLCTNDLNIFSLK-SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMV 85
+LR Q+HA LL T L L +KL+ YA G +S+RLVF+ P P+ FM ++
Sbjct: 13 SLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLI 72
Query: 86 MASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLD-IKKGKQVHAVATQMGF 144
+ + AI + + + +KF F VL+AC G + + G +VH + G
Sbjct: 73 KCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGV 132
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
++D + +L+ MY + G L A +VF GM RD+V+W++++S +V +A+ +F+
Sbjct: 133 DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKC 192
Query: 205 MKLEGLEPNQFTY-----------------------------------NAIIASYARRGD 229
M +G+EP+ T N+++ Y++ GD
Sbjct: 193 MVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGD 252
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
++ F ++ + + V+W AMIS + + + +AL+ F M+ SGI+PN VT+
Sbjct: 253 LLSSERIFEKIAKK----NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYS 308
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS-ALIDMYSKCGSLKDARTLFEITRIK 348
VL + GL G I+ G+ +H R L + + S AL+++Y++CG L D T+ + +
Sbjct: 309 VLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDR 368
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
N+ +WN++I Y GMV ++ LF +M+ + ++ + TL S +SAC + GLV G +I
Sbjct: 369 NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIH 428
Query: 409 RSMKERYGVKISKEHYA-CVVDMLCRSGRMVEAYDLLRQV---PMYVTNSMAGAFRNGCN 464
+ +S E ++DM +SG + A + Q+ + NSM F N
Sbjct: 429 GHVIR---TDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGN 485
Query: 465 IHGRRDLAVTMGEEFFEM 482
L M + EM
Sbjct: 486 SVEAISLFDYMYHSYLEM 503
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 149/551 (27%), Positives = 263/551 (47%), Gaps = 45/551 (8%)
Query: 2 NRLIFPINNLSVNYLDCLLGKCMKSKA-LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAG 59
+RL+ +S +L C S+ L G +VH + ++ + +++ L+ +Y
Sbjct: 89 HRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQ 148
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
G+++ A VFD +P ++ + +V + G +A+ F M + + T V
Sbjct: 149 TGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISV 208
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
++ C L ++ + VH T+ F+ D ++ N+L+ MYSKCG L S+ R+F + +++
Sbjct: 209 VEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNA 268
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-----YARRGDSNAAF 234
VSWT+MIS Y ++A+ F M G+EPN T ++++S R G S F
Sbjct: 269 VSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGF 328
Query: 235 AF--------------FSRMTAE-GFVPD------------LVTWNAMISGFAQSKRENE 267
A + AE G + D +V WN++IS +A +
Sbjct: 329 AVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQ 388
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
AL LF+ M+ IKP+ T+ + A G + +G++IH V R + D F ++LID
Sbjct: 389 ALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLID 447
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MYSK GS+ A T+F + ++V +WN+M+ + ++G +I LF+ M + NEVT
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVT 507
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHY--ACVVDMLCRSGRMVEAYDLLR 445
++V+ ACS G +EKG + + + + K+ + ++DM + G + A + R
Sbjct: 508 FLAVIQACSSIGSLEKG----KWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFR 563
Query: 446 QVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLS--NICAADGEW 503
+ S + N +HGR A++ + E G KP+ V ++ + C G
Sbjct: 564 AMSSRSIVSWSSMI-NAYGMHGRIGSAISTFNQMVESG-TKPNEVVFMNVLSACGHSGSV 621
Query: 504 HEAENLRKIMK 514
E + +MK
Sbjct: 622 EEGKYYFNLMK 632
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 176/379 (46%), Gaps = 43/379 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C +R+GK VH +L N SL LV +YA CG ++ V + +
Sbjct: 309 VLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDR 368
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
N+ N ++ A G +A+G F M + + FT + + AC + GKQ+H
Sbjct: 369 NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIH 428
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ ++ V N+LIDMYSK G + SA VF+ + R VV+W SM+ G+
Sbjct: 429 GHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSV 487
Query: 197 EAVVLFERMKLEGLEPNQ----------------------------------FTYNAIIA 222
EA+ LF+ M LE N+ FT A+I
Sbjct: 488 EAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALID 547
Query: 223 SYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
YA+ GD NAA F M++ +V+W++MI+ + R A+ F M+ SG KP
Sbjct: 548 MYAKCGDLNAAETVFRAMSSRS----IVSWSSMINAYGMHGRIGSAISTFNQMVESGTKP 603
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA-RTL 341
N V VL A G +GS++ G+ L+ G+ + + ID+ S+ G LK+A RT+
Sbjct: 604 NEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTI 663
Query: 342 FEITRIKNVASWNAMI-GC 359
E+ + + + W +++ GC
Sbjct: 664 KEMPFLADASVWGSLVNGC 682
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 288 bits (738), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 175/536 (32%), Positives = 283/536 (52%), Gaps = 34/536 (6%)
Query: 32 GKQVHALLCT-NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
G+Q HAL+ + + + LVG+Y G V VF +P N + + MV A
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 91 TGNFQEAIGYFSL-MREFIYRCNK-FTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
G +EAI F+L +RE + + F+ VL + + + G+Q+H + + G V
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLE 208
++ NAL+ MYSKC L A ++F +R+ ++W++M++GY + EAV LF RM
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 209 GLEPNQFTYNAIIAS-----YARRGDSNAAFAF---FSR----MTA-------------- 242
G++P+++T ++ + Y G +F F R TA
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 243 -EGF----VPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLT 297
+GF D+ W ++ISG+ Q+ EAL L++ M +GI PN+ T+ VL+A
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 298 GSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMI 357
++++G+++H + G ++V GSAL MYSKCGSL+D +F T K+V SWNAMI
Sbjct: 437 ATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMI 496
Query: 358 GCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGV 417
+G D ++ELFE ML EGM ++VT ++++SACSH G VE+G F M ++ G+
Sbjct: 497 SGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGL 556
Query: 418 KISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGE 477
+HYAC+VD+L R+G++ EA + + + + + C HG+ +L V GE
Sbjct: 557 DPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGE 616
Query: 478 EFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
+ +G R+ +V LS I A G + E + K M+ V K+ G S +E +N++
Sbjct: 617 KLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQY 672
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 250/520 (48%), Gaps = 53/520 (10%)
Query: 21 GKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
G+ + + +R G A C N+ LV YA CG + A +F+ I +V
Sbjct: 33 GRAVHGQIIRTG----ASTCIQHANV------LVNFYAKCGKLAKAHSIFNAIICKDVVS 82
Query: 81 LNWMVMASAFTGNFQEAIGYFSLMREFIYR---CNKFTFSIVLKACVGLLDIKKGKQVHA 137
N ++ + G + L RE + N +T + + KA L G+Q HA
Sbjct: 83 WNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHA 142
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDE 197
+ +M D+ V +L+ MY K GL+ +VF M ER+ +W++M+SGY +V+E
Sbjct: 143 LVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEE 202
Query: 198 AVV---LFERMKLEGLEPNQFTYNAIIASYARR----------------------GDSNA 232
A+ LF R K EG + + + + A+++S A SNA
Sbjct: 203 AIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNA 261
Query: 233 AFAFFS---------RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
+S +M + +TW+AM++G++Q+ EA+KLF M +GIKP+
Sbjct: 262 LVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPS 321
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
T+ GVL A ++ G+++H+ + ++G +F +AL+DMY+K G L DAR F+
Sbjct: 322 EYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFD 381
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
+ ++VA W ++I Y ++ + ++ L+ RM G+ N+ T+ SVL ACS +E
Sbjct: 382 CLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLEL 441
Query: 404 GLEIF-RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
G ++ ++K +G+++ + + M + G + + + R+ P S A +G
Sbjct: 442 GKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRRTPNKDVVSW-NAMISG 498
Query: 463 CNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADG 501
+ +G+ D A+ + EE G+ D FV + + C+ G
Sbjct: 499 LSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKG 538
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 184/384 (47%), Gaps = 30/384 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C L +GKQ+H+ L + ++F+ + LV +YA G + AR FD +
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFA-TTALVDMYAKAGCLADARKGFDCLQER 386
Query: 77 NVFMLNWMVMASAFTGNF--QEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+V + W + S + N +EA+ + M+ N T + VLKAC L ++ GKQ
Sbjct: 387 DVAL--WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ 444
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
VH + GF +V +G+AL MYSKCG L VF +DVVSW +MISG + +
Sbjct: 445 VHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 504
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAE-GFVPDLVTWN 253
DEA+ LFE M EG+EP+ T+ II++ + +G + +F+ M+ + G P + +
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564
Query: 254 AMISGFAQSKRENEALKLFKGMLVS-GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
M+ +++ + EA + + + G+ + ++ G + G ++ AL R
Sbjct: 565 CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSR 624
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA-----SWNAMIGCY------- 360
+ T L +Y+ G ++D +++ R V+ SW + Y
Sbjct: 625 -----ESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGD 679
Query: 361 GKHGMVDSSIELF----ERMLEEG 380
H M++ + +L +M+EEG
Sbjct: 680 TMHPMIEETKDLVCLVSRQMIEEG 703
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 38/173 (21%)
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR 339
+ P+ T+ L ++ GR +H + R G + + L++ Y+KCG L A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 340 TLFEITRIKNVASWNAMIGCYGKHGMVDSS---IELFERMLEEGMRANEVTLISVLSACS 396
++F K+V SWN++I Y ++G + SS ++LF M + + N TL + A S
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 397 -----------------------------------HGGLVEKGLEIFRSMKER 414
GLVE GL++F M ER
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 39/230 (16%)
Query: 210 LEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEAL 269
L P+ T + ++++ + A A ++ G + N +++ +A+ + +A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 270 KLFKGMLVSGIKPNNVTVTGVLQAGGLTGSI----------------------------- 300
+F ++ + N +TG Q GG++ S
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 301 -----QIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
+GR+ HALV +M D++ ++L+ MY K G ++D +F +N +W+
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 356 MIGCYGKHGMVDSSIE---LFERMLEEGMRANEV--TLISVLSACSHGGL 400
M+ Y G V+ +I+ LF R EEG ++ V ++S L+A + GL
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGL 239
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 286 bits (732), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 283/522 (54%), Gaps = 47/522 (9%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+ + L+ +Y+ V +AR++FD++P ++ N M+ +GN +EA+ + +R
Sbjct: 187 VAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM- 245
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ T +L AC D +G +H+ + + G E+++ V N LID+Y++ G L +
Sbjct: 246 ---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
+VF M+ RD++SW S+I Y + A+ LF+ M+L ++P+ T
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 218 -------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW 252
NA++ YA+ G ++A A F+ + D+++W
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN----TDVISW 418
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVC 311
N +ISG+AQ+ +EA++++ M G I N T VL A G+++ G ++H +
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 312 RMGLHIDVFTGSALIDMYSKCGSLKDARTLF-EITRIKNVASWNAMIGCYGKHGMVDSSI 370
+ GL++DVF ++L DMY KCG L+DA +LF +I R+ +V WN +I C+G HG + ++
Sbjct: 479 KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP-WNTLIACHGFHGHGEKAV 537
Query: 371 ELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDM 430
LF+ ML+EG++ + +T +++LSACSH GLV++G F M+ YG+ S +HY C+VDM
Sbjct: 538 MLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDM 597
Query: 431 LCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGF 490
R+G++ A ++ + + S+ GA + C +HG DL E FE+
Sbjct: 598 YGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYH 657
Query: 491 VMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
V+LSN+ A+ G+W + +R I K ++K PG+S +E N+
Sbjct: 658 VLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNK 699
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 160/525 (30%), Positives = 254/525 (48%), Gaps = 51/525 (9%)
Query: 29 LRQGKQVHA-LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMA 87
L+ K +HA L+ + + + +KLV +Y G+V AR FD I N +V+ N M+
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 88 SAFTGNFQEAIGYFSL-MREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
GN E I FSL M + TF VLKAC ++D G ++H +A + GF
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMW 183
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK 206
DV V +LI +YS+ + +AR +F M RD+ SW +MISGYC EA+ L ++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 207 L-------------------------------EGLEPNQFTYNAIIASYARRGDSNAAFA 235
GLE F N +I YA G
Sbjct: 244 AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F RM +V DL++WN++I + +++ A+ LF+ M +S I+P+ +T+ +
Sbjct: 304 VFDRM----YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 296 LTGSIQIGREIHALVCRMGLHI-DVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWN 354
G I+ R + R G + D+ G+A++ MY+K G + AR +F +V SWN
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 355 AMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKGLEIF-RSMK 412
+I Y ++G +IE++ M EEG + AN+ T +SVL ACS G + +G+++ R +K
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Query: 413 ERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCN-IHGRRDL 471
G+ + + DM + GR+ +A L Q+P NS+ C+ HG +
Sbjct: 480 N--GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR--VNSVPWNTLIACHGFHGHGEK 535
Query: 472 AVTMGEEFFEMGLRKPD--GFVMLSNICAADGEWHEAENLRKIMK 514
AV + +E + G+ KPD FV L + C+ G E + ++M+
Sbjct: 536 AVMLFKEMLDEGV-KPDHITFVTLLSACSHSGLVDEGQWCFEMMQ 579
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 139/301 (46%), Gaps = 33/301 (10%)
Query: 128 DIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMIS 187
+++ K +HA +V + L+++Y G + AR F + RDV +W MIS
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 188 GYCNVSKVDEAVVLFERMKL-EGLEPNQFTYNAIIASYARRGDSNA------AFAF---- 236
GY E + F L GL P+ T+ +++ + D N F F
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDV 185
Query: 237 ---------FSRMTAEG---------FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+SR A G V D+ +WNAMISG+ QS EAL L G+
Sbjct: 186 YVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM 245
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
++VTV +L A G G IH+ + GL ++F + LID+Y++ G L+D
Sbjct: 246 ----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDC 301
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+ +F+ ++++ SWN++I Y + +I LF+ M ++ + +TLIS+ S S
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 399 G 399
G
Sbjct: 362 G 362
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 14/218 (6%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C ++ ALRQG ++H L N L ++F + S L +Y CG + A +F +IP
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTS-LADMYGKCGRLEDALSLFYQIPRV 515
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV--GLLDIKKGKQ 134
N N ++ F G+ ++A+ F M + + + TF +L AC GL+D +G+
Sbjct: 516 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD--EGQW 573
Query: 135 -VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGM-FERDVVSWTSMISGYCNV 192
+ T G + ++DMY + G L +A + M + D W +++S C V
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA-CRV 632
Query: 193 -SKVDEAVVLFERMKLEGLEPNQFTYNAIIAS-YARRG 228
VD + E L +EP Y+ ++++ YA G
Sbjct: 633 HGNVDLGKIASEH--LFEVEPEHVGYHVLLSNMYASAG 668
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 285 bits (730), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 260/486 (53%), Gaps = 47/486 (9%)
Query: 52 KLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC 111
+L+ V + V+ A VF + NPNV++ M+ +G + + + M
Sbjct: 66 ELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLP 125
Query: 112 NKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
+ + + VLKAC D+K +++HA ++GF + SVG ++++Y K G L +A+++F
Sbjct: 126 DNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMF 181
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M +RD V+ T MI+ Y + EA+ LF+ +K++
Sbjct: 182 DEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIK----------------------- 218
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
D V W AMI G ++K N+AL+LF+ M + + N T VL
Sbjct: 219 ----------------DTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVL 262
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
A G++++GR +H+ V + + F G+ALI+MYS+CG + +AR +F + R K+V
Sbjct: 263 SACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVI 322
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
S+N MI HG +I F M+ G R N+VTL+++L+ACSHGGL++ GLE+F SM
Sbjct: 323 SYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM 382
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
K + V+ EHY C+VD+L R GR+ EAY + +P+ + M G + C IHG +L
Sbjct: 383 KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMEL 442
Query: 472 AVTMGEEFFEMGLRKPDG--FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEK 529
+ + FE PD +V+LSN+ A+ G+W E+ +R+ M++ ++K+PG S +E
Sbjct: 443 GEKIAKRLFES--ENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEV 500
Query: 530 RNEFVE 535
N+ E
Sbjct: 501 DNQIHE 506
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 285 bits (730), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 247/447 (55%), Gaps = 32/447 (7%)
Query: 116 FSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF 175
++ +LK C + +G+ VHA Q F +D+ +GN L++MY+KCG L AR+VF M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYA--RRG----- 228
+RD V+WT++ISGY + +A++ F +M G PN+FT +++I + A RRG
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 229 ----------DSNAAF--AFFSRMTAEGFVPDL------------VTWNAMISGFAQSKR 264
DSN A T G + D V+WNA+I+G A+
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
+AL+LF+GML G +P++ + + A TG ++ G+ +HA + + G + F G+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
L+DMY+K GS+ DAR +F+ ++V SWN+++ Y +HG ++ FE M G+R N
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 385 EVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL 444
E++ +SVL+ACSH GL+++G + MK+ G+ HY VVD+L R+G + A +
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 445 RQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWH 504
++P+ T ++ A N C +H +L E FE+ P V+L NI A+ G W+
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 505 EAENLRKIMKEKNVQKQPGFSRVEKRN 531
+A +RK MKE V+K+P S VE N
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEIEN 508
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 214/447 (47%), Gaps = 55/447 (12%)
Query: 15 YLDCLLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
+ + LL KC K L QG+ VHA + + + + + L+ +YA CG + AR VF+K+
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM 121
Query: 74 PNPNVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKK 131
P + + W + S ++ + + +A+ +F+ M F Y N+FT S V+KA
Sbjct: 122 PQRD--FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179
Query: 132 GKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCN 191
G Q+H + GF+++V VG+AL+D+Y++ GL+ A+ VF + R+ VSW ++I+G+
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 192 VSKVDEAVVLFERMKLEGLEPNQFTY---------------------------------- 217
S ++A+ LF+ M +G P+ F+Y
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 218 -NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML 276
N ++ YA+ G + A F R+ D+V+WN++++ +AQ EA+ F+ M
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 277 VSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLK 336
GI+PN ++ VL A +G + G + L+ + G+ + + ++D+ + G L
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Query: 337 DARTLFEITRIKNVAS-WNAMIGCYGKHGMVD----SSIELFERMLEEGMRANEVTLISV 391
A E I+ A+ W A++ H + ++ +FE L+ V L ++
Sbjct: 416 RALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFE--LDPDDPGPHVILYNI 473
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVK 418
++ GG + + MKE GVK
Sbjct: 474 YAS---GGRWNDAARVRKKMKES-GVK 496
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 285 bits (728), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 180/574 (31%), Positives = 286/574 (49%), Gaps = 66/574 (11%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSL-KSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C LR G Q+HA +D + ++ + +YA C ++ A+++FD N N
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 346
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC-------NKFTFSIVLKACVGLLDIK 130
N M+ TG QE G+ +L+ +R ++ + S V +AC + +
Sbjct: 347 RQSYNAMI-----TGYSQEEHGFKALL--LFHRLMSSGLGFDEISLSGVFRACALVKGLS 399
Query: 131 KGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYC 190
+G Q++ +A + DV V NA IDMY KC L A RVF M RD VSW ++I+ +
Sbjct: 400 EGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE 459
Query: 191 NVSKVDEAVVLFERMKLEGLEPNQFTYNAII---------------ASYARRG-DSNAAF 234
K E + LF M +EP++FT+ +I+ +S + G SN++
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSV 519
Query: 235 A----------------------FFSRMTAEGFVPDL------------VTWNAMISGFA 260
FF R G + +L V+WN++ISG+
Sbjct: 520 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 579
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
++ +A LF M+ GI P+ T VL S +G++IHA V + L DV+
Sbjct: 580 MKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVY 639
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG 380
S L+DMYSKCG L D+R +FE + ++ +WNAMI Y HG + +I+LFERM+ E
Sbjct: 640 ICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN 699
Query: 381 MRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++ N VT IS+L AC+H GL++KGLE F MK YG+ HY+ +VD+L +SG++ A
Sbjct: 700 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 759
Query: 441 YDLLRQVPMYVTNSMAGAFRNGCNIHGRR-DLAVTMGEEFFEMGLRKPDGFVMLSNICAA 499
+L+R++P + + C IH ++A + + + +LSN+ A
Sbjct: 760 LELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYAD 819
Query: 500 DGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEF 533
G W + +LR+ M+ ++K+PG S VE ++E
Sbjct: 820 AGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDEL 853
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 139/498 (27%), Positives = 235/498 (47%), Gaps = 69/498 (13%)
Query: 8 INNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNS 65
+N++S + +C K AL GKQ HA + + F L L+ VY D S
Sbjct: 43 VNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNC-LLQVYTNSRDFVS 101
Query: 66 ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM--------------------- 104
A +VFDK+P +V N M+ + + + +A +F++M
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES 161
Query: 105 -----------REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNA 153
RE I + TF+I+LK C L D G Q+H + ++G + DV +A
Sbjct: 162 LKSIEVFVDMGREGI-EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASA 220
Query: 154 LIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPN 213
L+DMY+K + RVF G+ E++ VSW+++I+G + + A+ F+ M+ +
Sbjct: 221 LLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVS 280
Query: 214 QFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEGFVPDLV------------------ 250
Q Y +++ S A R G A A S A+G V
Sbjct: 281 QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD 340
Query: 251 --------TWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI 302
++NAMI+G++Q + +AL LF ++ SG+ + ++++GV +A L +
Sbjct: 341 NSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 303 GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGK 362
G +I+ L + L +DV +A IDMY KC +L +A +F+ R ++ SWNA+I + +
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 460
Query: 363 HGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKE 422
+G ++ LF ML + +E T S+L AC+ GG + G+EI S+ + G+ +
Sbjct: 461 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIV-KSGMASNSS 518
Query: 423 HYACVVDMLCRSGRMVEA 440
++DM + G + EA
Sbjct: 519 VGCSLIDMYSKCGMIEEA 536
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 211/470 (44%), Gaps = 78/470 (16%)
Query: 32 GKQVHALL----CTNDLNIFSLKSKLVGVYA-GCGDVNSARLVFDKIPNPNVFMLNWMVM 86
G Q+H ++ C D+ S L+ +YA G V S R VF IP N ++W +
Sbjct: 199 GMQIHGIVVRVGCDTDV---VAASALLDMYAKGKRFVESLR-VFQGIPEKNS--VSWSAI 252
Query: 87 ASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGF 144
+ N A+ +F M++ ++ ++ VL++C L +++ G Q+HA A + F
Sbjct: 253 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 312
Query: 145 ENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFER 204
D V A +DMY+KC + A+ +F + S+ +MI+GY +A++LF R
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 372
Query: 205 MKLEGLEPNQFTY-----------------------------------NAIIASYARRGD 229
+ GL ++ + NA I Y +
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
AF F M D V+WNA+I+ Q+ + E L LF ML S I+P+ T
Sbjct: 433 LAEAFRVFDEMRRR----DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGS 488
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDAR---------- 339
+L+A GS+ G EIH+ + + G+ + G +LIDMYSKCG +++A
Sbjct: 489 ILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRA 547
Query: 340 ----TLFEITRIKN------VASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLI 389
T+ E+ ++ N SWN++I Y + + LF RM+E G+ ++ T
Sbjct: 548 NVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYA 607
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC--VVDMLCRSGRM 437
+VL C++ G +I + ++ ++ + Y C +VDM + G +
Sbjct: 608 TVLDTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDL 654
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/490 (24%), Positives = 207/490 (42%), Gaps = 87/490 (17%)
Query: 89 AFTGNFQEAIGY-----FSLMREFIYRCNKFT---FSIVLKACVGLLDIKKGKQVHA--- 137
+F E I Y FS +F+ + N + FS V K C ++ GKQ HA
Sbjct: 16 SFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMI 75
Query: 138 ------------------------VATQMGFEN----DVSVGNALIDMYSKCGLLCSARR 169
V+ M F+ DV N +I+ YSK + A
Sbjct: 76 ISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANS 135
Query: 170 VFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGD 229
F+ M RDVVSW SM+SGY + +++ +F M EG+E + T+ I+ + D
Sbjct: 136 FFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLED 195
Query: 230 SNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM----------LVSG 279
++ + G D+V +A++ +A+ KR E+L++F+G+ +++G
Sbjct: 196 TSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAG 255
Query: 280 IKPNNV---------------------TVTGVLQAGGLTGSIQIGREIHALVCRMGLHID 318
NN+ VL++ +++G ++HA + D
Sbjct: 256 CVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAAD 315
Query: 319 VFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
+A +DMY+KC +++DA+ LF+ + N S+NAMI Y + ++ LF R++
Sbjct: 316 GIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMS 375
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV----VDMLCRS 434
G+ +E++L V AC+ + +GL+I+ +K S CV +DM +
Sbjct: 376 SGLGFDEISLSGVFRACALVKGLSEGLQIY-----GLAIKSSLSLDVCVANAAIDMYGKC 430
Query: 435 GRMVEA---YDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFV 491
+ EA +D +R+ N++ A + L V+M E PD F
Sbjct: 431 QALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIE-----PDEFT 485
Query: 492 MLSNICAADG 501
S + A G
Sbjct: 486 FGSILKACTG 495
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 285 bits (728), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 167/508 (32%), Positives = 275/508 (54%), Gaps = 15/508 (2%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGD---VNSARLVFDKI 73
+L ++K+L + +Q HA + L + FS SKLV A + V+ A + ++I
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFS-ASKLVAFAATNPEPKTVSYAHSILNRI 100
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+PN F N ++ A A + + A+ F M +K++F+ VLKAC ++G+
Sbjct: 101 GSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGR 160
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H + + G DV V N L+++Y + G AR+V M RD VSW S++S Y
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
VDEA LF+ M+ E N ++N +I+ YA G A F M V D+V+WN
Sbjct: 221 LVDEARALFDEME----ERNVESWNFMISGYAAAGLVKEAKEVFDSMP----VRDVVSWN 272
Query: 254 AMISGFAQSKRENEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
AM++ +A NE L++F ML S KP+ T+ VL A GS+ G +H + +
Sbjct: 273 AMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDK 332
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
G+ I+ F +AL+DMYSKCG + A +F T ++V++WN++I HG+ ++E+
Sbjct: 333 HGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEI 392
Query: 373 FERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLC 432
F M+ EG + N +T I VLSAC+H G++++ ++F M Y V+ + EHY C+VD+L
Sbjct: 393 FSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLG 452
Query: 433 RSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVM 492
R G++ EA +L+ ++P + + + C G+ + A + E+ LR G+
Sbjct: 453 RMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQ 512
Query: 493 LSNICAADGEWHEAENLRKIMKEKNVQK 520
+SN+ A+DG W + + R+ M+ + V +
Sbjct: 513 MSNLYASDGRWEKVIDGRRNMRAERVNR 540
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 285/551 (51%), Gaps = 55/551 (9%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
L C+ S+ G Q+ + + L + + + + +Y+ G AR VFD++ +
Sbjct: 181 LSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKD- 239
Query: 79 FMLNWMVMASAF----TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
M++W + S T F+ + + +MRE + + +F+ V+ C D+K +Q
Sbjct: 240 -MISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV-ELDHVSFTSVITTCCHETDLKLARQ 297
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + + G+E+ + VGN L+ YSKCG+L + + VFH M ER+VVSWT+MIS S
Sbjct: 298 IHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SN 352
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
D+AV +F M+ +G+ PN+ T+ N+
Sbjct: 353 KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNS 412
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG 279
I YA+ A F +T ++++WNAMISGFAQ+ +EALK+F
Sbjct: 413 FITLYAKFEALEDAKKAFEDIT----FREIISWNAMISGFAQNGFSHEALKMFLSAAAET 468
Query: 280 IKPNNVTVTGVLQAGGLTGSIQI--GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
+ PN T VL A I + G+ HA + ++GL+ SAL+DMY+K G++ +
Sbjct: 469 M-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDE 527
Query: 338 ARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSH 397
+ +F KN W ++I Y HG ++ + LF +M++E + + VT +SVL+AC+
Sbjct: 528 SEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNR 587
Query: 398 GGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAG 457
G+V+KG EIF M E Y ++ S EHY+C+VDML R+GR+ EA +L+ +VP SM
Sbjct: 588 KGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQ 647
Query: 458 AFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKN 517
+ C +HG + + E EM +V + NI A EW +A +RK M++KN
Sbjct: 648 SMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKN 707
Query: 518 VQKQPGFSRVE 528
V K+ GFS ++
Sbjct: 708 VSKEAGFSWID 718
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 197/413 (47%), Gaps = 54/413 (13%)
Query: 23 CMKSKA----LRQGKQVHALLCTNDLNIFSLKSKLV-GVYAGCGDVNSARLVFDKIPNPN 77
C+ KA L++G Q+H T+ F S V G+Y G ++A +F+ + +P+
Sbjct: 82 CLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 141
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
V ++W + S F N Q A+ + M+ + FT+S L CVG G Q+ +
Sbjct: 142 V--VSWNTILSGFDDN-QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQS 198
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD- 196
+ G E+D+ VGN+ I MYS+ G ARRVF M +D++SW S++SG
Sbjct: 199 TVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGF 258
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
EAVV+F M EG+E + ++ ++I +
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 318
Query: 224 --YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y++ G A + F +M+ ++V+W MI S +++A+ +F M G+
Sbjct: 319 SRYSKCGVLEAVKSVFHQMSER----NVVSWTTMI-----SSNKDDAVSIFLNMRFDGVY 369
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
PN VT G++ A I+ G +IH L + G + G++ I +Y+K +L+DA+
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
FE + + SWNAMI + ++G ++++F E M NE T SVL+A
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNA 481
Score = 39.7 bits (91), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 260 AQSKRENE---ALKLFKGMLVSGIKPNNVT-VTGVLQAGGLTGSIQIGREIHALVCRMGL 315
++S R N AL +FK L G ++ VT L G ++ G +IH G
Sbjct: 48 SESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACRGDLKRGCQIHGFSTTSGF 107
Query: 316 HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL--F 373
V +A++ MY K G +A +FE +V SWN ++ G D+ I L
Sbjct: 108 TSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILS-----GFDDNQIALNFV 162
Query: 374 ERMLEEGMRANEVTLISVLSAC 395
RM G+ + T + LS C
Sbjct: 163 VRMKSAGVVFDAFTYSTALSFC 184
>sp|Q1PFQ9|PPR62_ARATH Pentatricopeptide repeat-containing protein At1g28690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E34 PE=2
SV=2
Length = 520
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 280/536 (52%), Gaps = 58/536 (10%)
Query: 6 FPI-NNLS----VNYLDCLLGKCMKSKALRQGKQVHALLCTN----DLNIFSLKSKLVGV 56
FP+ N+S Y+ L + + S A + GK++HA + DLNI KL+ +
Sbjct: 22 FPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNI---SIKLLIL 78
Query: 57 YAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTF 116
+ CG ++ AR VFD++P P + N+M+ G +E + M + + +T
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 117 SIVLKAC-----VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVF 171
S+VLKA +L + VHA + E D + AL+D Y K G L SAR VF
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 172 HGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSN 231
M + +VV TSMISGY N V++A +F K
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK------------------------- 233
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQS-KRENEALKLFKGMLVSGIKPNNVTVTGV 290
V D+V +NAM+ GF++S + ++ ++ M +G PN T V
Sbjct: 234 --------------VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
+ A + S ++G+++HA + + G++ + GS+L+DMY+KCG + DAR +F+ + KNV
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV 339
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
SW +MI YGK+G + ++ELF RM E + N VT + LSACSH GLV+KG EIF S
Sbjct: 340 FSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFES 399
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRD 470
M+ Y +K EHYAC+VD++ R+G + +A++ R +P + + A + CN+HG +
Sbjct: 400 MQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVE 459
Query: 471 LAVTMGEEFFEMGL-RKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
LA E F++ ++P ++ LSN+ A++ +W +R++MK + + K G S
Sbjct: 460 LASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 280 bits (717), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/479 (33%), Positives = 251/479 (52%), Gaps = 41/479 (8%)
Query: 89 AFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDV 148
A+ F E+I + M + F+F +LK+C L G+Q+H T+ G E +
Sbjct: 29 AYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEP 88
Query: 149 SVGNALIDMYSKCGLLCSARRVFHGMFERDVVS--WTSMISGYCNVSKVDEAVVLFERMK 206
V ALI MY KCGL+ AR+VF + +S + ++ISGY SKV +A +F RMK
Sbjct: 89 FVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMK 148
Query: 207 LEGLEPNQFT-----------------------------------YNAIIASYARRGDSN 231
G+ + T N+ I Y + G
Sbjct: 149 ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVE 208
Query: 232 AAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
A F M +G L+TWNA+ISG++Q+ + L+L++ M SG+ P+ T+ VL
Sbjct: 209 AGRRLFDEMPVKG----LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVL 264
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
+ G+ +IG E+ LV G +VF +A I MY++CG+L AR +F+I +K++
Sbjct: 265 SSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV 324
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSM 411
SW AMIGCYG HGM + + LF+ M++ G+R + + VLSACSH GL +KGLE+FR+M
Sbjct: 325 SWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM 384
Query: 412 KERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDL 471
K Y ++ EHY+C+VD+L R+GR+ EA + + +P+ ++ GA C IH D+
Sbjct: 385 KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDM 444
Query: 472 AVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKR 530
A + E +V++SNI + +R +M+E+ +K+PG+S VE +
Sbjct: 445 AELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHK 503
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 172/397 (43%), Gaps = 38/397 (9%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
+L C G+Q+H + + F L + L+ +Y CG V AR VF++ P
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVL-TALISMYCKCGLVADARKVFEENPQS 117
Query: 77 NVFMLNWMVMASAFTGNFQ--EAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+ + + + S +T N + +A F M+E + T ++ C + G+
Sbjct: 118 SQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRS 177
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H + G +++V+V N+ I MY KCG + + RR+F M + +++W ++ISGY
Sbjct: 178 LHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGL 237
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD------ 248
+ + L+E+MK G+ P+ FT ++++S A G + + GFVP+
Sbjct: 238 AYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNA 297
Query: 249 -------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPN 283
LV+W AMI + L LF M+ GI+P+
Sbjct: 298 SISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPD 357
Query: 284 NVTVTGVLQAGGLTGSIQIGREI-HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
VL A +G G E+ A+ L S L+D+ + G L +A
Sbjct: 358 GAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFI 417
Query: 343 EITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLE 378
E ++ + A W A++G H VD + F +++E
Sbjct: 418 ESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE 454
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
WN + A +E++ L++ ML SG P+ + +L++ G+++H
Sbjct: 19 TPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 78
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVAS--WNAMIGCYGKHGMVD 367
V + G + F +ALI MY KCG + DAR +FE + S +NA+I Y + V
Sbjct: 79 VTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE 406
+ +F RM E G+ + VT++ ++ C+ HG V+ GL+
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLD 188
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/534 (30%), Positives = 275/534 (51%), Gaps = 41/534 (7%)
Query: 32 GKQVHALLCTND-LNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAF 90
G+ +H L+ + + + S LVG+YA ++ VFD++P +V N ++
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 91 TGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
+G ++A+ F M + N + ++ + AC LL +++GK++H + GFE D V
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 151 GNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGL 210
+AL+DMY KC L AR VF M + +V+W SMI GY V + RM +EG
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 211 EPNQFTYNAIIASYARR-----------------------------------GDSNAAFA 235
P+Q T +I+ + +R G++N A
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
FS+ + V + +WN MIS + +A++++ M+ G+KP+ VT T VL A
Sbjct: 366 VFSKTQKD--VAE--SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACS 421
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
+++ G++IH + L D SAL+DMYSKCG+ K+A +F K+V SW
Sbjct: 422 QLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTV 481
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
MI YG HG ++ F+ M + G++ + VTL++VLSAC H GL+++GL+ F M+ +Y
Sbjct: 482 MISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKY 541
Query: 416 GVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS-MAGAFRNGCNIHGRRDLAVT 474
G++ EHY+C++D+L R+GR++EAY++++Q P N+ + + C +H L
Sbjct: 542 GIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDR 601
Query: 475 MGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ E +++L N+ A+ W A +R MKE ++K+PG S +E
Sbjct: 602 IARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIE 655
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/519 (28%), Positives = 249/519 (47%), Gaps = 46/519 (8%)
Query: 19 LLGKCMKS-KALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGDVNSARLVFDKIP- 74
LL +C S K+LR+ K VH + T L ++ KS L+ VY C D SAR VF+
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKS-LINVYFTCKDHCSARHVFENFDI 67
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFS-LMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
+V++ N ++ + F + + F L+ I + FTF V+KA L G+
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
+H + + G+ DV V ++L+ MY+K L ++ +VF M ERDV SW ++IS +
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPD----- 248
+ ++A+ LF RM+ G EPN + I++ +R + +GF D
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 249 --------------------------LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
LV WN+MI G+ +++ M++ G +P
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ T+T +L A + ++ G+ IH V R ++ D++ +LID+Y KCG A T+F
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF 367
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
T+ SWN MI Y G ++E++++M+ G++ + VT SVL ACS +E
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALE 427
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS---MAGAF 459
KG +I S+ E ++ + + ++DM + G EA+ + +P S M A+
Sbjct: 428 KGKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAY 486
Query: 460 RNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
+ HG+ A+ +E + GL KPDG +L+ + A
Sbjct: 487 GS----HGQPREALYQFDEMQKFGL-KPDGVTLLAVLSA 520
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 143/275 (52%), Gaps = 2/275 (0%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAG 59
+NR+I S L +L C +S+ L GK +H + + +N + L+ +Y
Sbjct: 297 LNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFK 356
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIV 119
CG+ N A VF K N M+ + GN+ +A+ + M + + TF+ V
Sbjct: 357 CGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSV 416
Query: 120 LKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDV 179
L AC L ++KGKQ+H ++ E D + +AL+DMYSKCG A R+F+ + ++DV
Sbjct: 417 LPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDV 476
Query: 180 VSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSR 239
VSWT MIS Y + + EA+ F+ M+ GL+P+ T A++++ G + FFS+
Sbjct: 477 VSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQ 536
Query: 240 MTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFK 273
M ++ G P + ++ MI ++ R EA ++ +
Sbjct: 537 MRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQ 571
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/519 (29%), Positives = 270/519 (52%), Gaps = 6/519 (1%)
Query: 20 LGKCMKSKA----LRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIP 74
+ C+ + A + +GKQ HA+ N + + + L + L+ Y G + A +VFD++
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMF 336
Query: 75 NPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
+V N ++ G ++AI LMR + + T + ++ A ++K GK+
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
V + FE+D+ + + ++DMY+KCG + A++VF E+D++ W ++++ Y
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGL 456
Query: 195 VDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNA 254
EA+ LF M+LEG+ PN T+N II S R G + A F +M + G +P+L++W
Sbjct: 457 SGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTT 516
Query: 255 MISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMG 314
M++G Q+ EA+ + M SG++PN ++T L A S+ IGR IH + R
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL 576
Query: 315 LHIDVFT-GSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
H + + ++L+DMY+KCG + A +F + NAMI Y +G + +I L+
Sbjct: 577 QHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALY 636
Query: 374 ERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCR 433
+ G++ + +T+ +VLSAC+H G + + +EIF + + +K EHY +VD+L
Sbjct: 637 RSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLAS 696
Query: 434 SGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVML 493
+G +A L+ ++P M + CN + +L + + E +V +
Sbjct: 697 AGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTI 756
Query: 494 SNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
SN A +G W E +R++MK K ++K+PG S ++ E
Sbjct: 757 SNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGE 795
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 232/465 (49%), Gaps = 39/465 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIP 74
+L C+ + L GKQ+HA + N + ++ +++KLV YA C + A ++F K+
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNG-DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLR 134
Query: 75 NPNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
NVF ++ G + A+ G+ ++ I+ N F V KAC L + G+
Sbjct: 135 VRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDN-FVVPNVCKACGALKWSRFGR 193
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH + G E+ V V ++L DMY KCG+L A +VF + +R+ V+W +++ GY
Sbjct: 194 GVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNG 253
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYA-----RRGDSNAAFAFFSRMTAEG---- 244
K +EA+ LF M+ +G+EP + T + +++ A G + A A + M +
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGT 313
Query: 245 ----------------------FVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKP 282
F D+VTWN +ISG+ Q +A+ + + M + +K
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY 373
Query: 283 NNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLF 342
+ VT+ ++ A T ++++G+E+ R D+ S ++DMY+KCGS+ DA+ +F
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 343 EITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVE 402
+ T K++ WN ++ Y + G+ ++ LF M EG+ N +T ++ + G V+
Sbjct: 434 DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVD 493
Query: 403 KGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV 447
+ ++F M+ G+ + + +++ + ++G EA LR++
Sbjct: 494 EAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 193/408 (47%), Gaps = 45/408 (11%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG--FENDVS 149
G +EA+ + M R + +L+ CV D+ GKQ+HA + G + +
Sbjct: 49 GEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEY 108
Query: 150 VGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEG 209
+ L+ Y+KC L A +F + R+V SW ++I C + + A++ F M
Sbjct: 109 IETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENE 168
Query: 210 LEPNQFTYNAIIAS-----YARRGDSNAAF---------AFFSRMTAEGF---------- 245
+ P+ F + + ++R G + F + A+ +
Sbjct: 169 IFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDAS 228
Query: 246 -----VPD--LVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTG 298
+PD V WNA++ G+ Q+ + EA++LF M G++P VTV+ L A G
Sbjct: 229 KVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMG 288
Query: 299 SIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIG 358
++ G++ HA+ G+ +D G++L++ Y K G ++ A +F+ K+V +WN +I
Sbjct: 289 GVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIIS 348
Query: 359 CYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
Y + G+V+ +I + + M E ++ + VTL +++SA + ++ G E+ + Y ++
Sbjct: 349 GYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV-----QCYCIR 403
Query: 419 ISKEH----YACVVDMLCRSGRMVEA---YDLLRQVPMYVTNSMAGAF 459
S E + V+DM + G +V+A +D + + + N++ A+
Sbjct: 404 HSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAY 451
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
P ++ +S ++ EAL L M ++ +LQ + G++I
Sbjct: 33 PSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQI 92
Query: 307 HALVCRMG--LHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHG 364
HA + + G + + + L+ Y+KC +L+ A LF R++NV SW A+IG + G
Sbjct: 93 HARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIG 152
Query: 365 MVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE----IFR 409
+ + ++ F MLE + + + +V AC HG +V+ GLE +
Sbjct: 153 LCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVAS 212
Query: 410 SMKERYG 416
S+ + YG
Sbjct: 213 SLADMYG 219
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 280 bits (715), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 284/543 (52%), Gaps = 35/543 (6%)
Query: 18 CLLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNP 76
C+L C L +GK+VH + + + + L+ +Y CGDV SARL+FD++P
Sbjct: 201 CVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR 260
Query: 77 NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
++ N M+ G E + F MR + T + V+ AC L D + G+ +H
Sbjct: 261 DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIH 320
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
A GF D+SV N+L MY G A ++F M +D+VSWT+MISGY D
Sbjct: 321 AYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPD 380
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAA-----FAFFSRMTAEGFVP---- 247
+A+ + M + ++P++ T A++++ A GD + A +R+ + V
Sbjct: 381 KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLI 440
Query: 248 ----------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNV 285
++++W ++I+G + R EAL + M ++ ++PN +
Sbjct: 441 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAI 499
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEIT 345
T+T L A G++ G+EIHA V R G+ +D F +AL+DMY +CG + A + F +
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN-S 558
Query: 346 RIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGL 405
+ K+V SWN ++ Y + G +ELF+RM++ +R +E+T IS+L CS +V +GL
Sbjct: 559 QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL 618
Query: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
F M E YGV + +HYACVVD+L R+G + EA+ ++++P+ ++ GA N C I
Sbjct: 619 MYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 466 HGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
H + DL + FE+ + +++L N+ A G+W E +R++MKE + G S
Sbjct: 678 HHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737
Query: 526 RVE 528
VE
Sbjct: 738 WVE 740
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 241/517 (46%), Gaps = 46/517 (8%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNI-FSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
L+ C +A +G +V+++ ++ ++ L + + ++ G++ A VF K+ N
Sbjct: 100 LVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERN 159
Query: 78 VFMLNWMVMASAFTGNFQEAIG-YFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVH 136
+F N +V A G F EA+ Y ++ + + +TF VL+ C G+ D+ +GK+VH
Sbjct: 160 LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVH 219
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVD 196
+ G+E D+ V NALI MY KCG + SAR +F M RD++SW +MISGY
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIAS--------------------------------- 223
E + LF M+ ++P+ T ++I++
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 224 --YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y G A FSRM + D+V+W MISG+ + ++A+ ++ M +K
Sbjct: 340 QMYLNAGSWREAEKLFSRMERK----DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P+ +TV VL A G + G E+H L + L V + LI+MYSKC + A +
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F KNV SW ++I + ++ +F R ++ ++ N +TL + L+AC+ G +
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGAL 514
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
G EI + R GV + ++DM R GRM A+ VT+
Sbjct: 515 MCGKEIHAHVL-RTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKDVTS--WNILLT 571
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
G + G+ + V + + + +R PD +S +C
Sbjct: 572 GYSERGQGSMVVELFDRMVKSRVR-PDEITFISLLCG 607
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 193/397 (48%), Gaps = 49/397 (12%)
Query: 92 GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVG 151
G +EA+ + M+E ++ F +++ C ++G +V+++A V +G
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 152 NALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM-KLEGL 210
NA + M+ + G L A VF M ER++ SW ++ GY DEA+ L+ RM + G+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 211 EPNQFTY-----------------------------------NAIIASYARRGDSNAAFA 235
+P+ +T+ NA+I Y + GD +A
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 236 FFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGG 295
F RM D+++WNAMISG+ ++ +E L+LF M + P+ +T+T V+ A
Sbjct: 253 LFDRMPRR----DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 296 LTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNA 355
L G ++GR+IHA V G +D+ ++L MY GS ++A LF K++ SW
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 356 MIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERY 415
MI Y + + D +I+ + M ++ ++ +E+T+ +VLSAC+ G ++ G+E+ +
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL-----HKL 423
Query: 416 GVKISKEHYACV----VDMLCRSGRMVEAYDLLRQVP 448
+K Y V ++M + + +A D+ +P
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 278 bits (712), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 182/610 (29%), Positives = 296/610 (48%), Gaps = 87/610 (14%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHAL-LCTNDLNIFSLKSKLVGVYAG 59
M+ L + +N + ++ C + ++R G+ HAL L T ++ + + LV +Y+
Sbjct: 118 MHSLSWTPDNYTFPFV---FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR 174
Query: 60 CGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLM-REFIYRCNKFTFSI 118
C ++ AR VFD++ +V N ++ + A G + A+ FS M EF R + T
Sbjct: 175 CRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVN 234
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
VL C L GKQ+H A ++ VGN L+DMY+KCG++ A VF M +D
Sbjct: 235 VLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294
Query: 179 VVSWTSMISGYCNVSKVD-----------------------------------EAVVLFE 203
VVSW +M++GY + + + EA+ +
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 204 RMKLEGLEPNQFTY------------------------------------------NAII 221
+M G++PN+ T N +I
Sbjct: 355 QMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLI 414
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSG-- 279
YA+ + A A F ++ + D+VTW MI G++Q N+AL+L M
Sbjct: 415 DMYAKCKKVDTARAMFDSLSPKE--RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 280 IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLH-IDVFTGSALIDMYSKCGSLKDA 338
+PN T++ L A +++IG++IHA R + + +F + LIDMY+KCGS+ DA
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA 532
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
R +F+ KN +W +++ YG HG + ++ +F+ M G + + VTL+ VL ACSH
Sbjct: 533 RLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHS 592
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
G++++G+E F MK +GV EHYAC+VD+L R+GR+ A L+ ++PM + A
Sbjct: 593 GMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVA 652
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
F + C IHG+ +L E+ E+ + +LSN+ A G W + +R +M+ K V
Sbjct: 653 FLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGV 712
Query: 519 QKQPGFSRVE 528
+K+PG S VE
Sbjct: 713 KKRPGCSWVE 722
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 152/553 (27%), Positives = 242/553 (43%), Gaps = 90/553 (16%)
Query: 25 KSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWM 84
K K + Q K +H L + + +L S L+ Y G ++ A + + P + + +W
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 85 VMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQM 142
+ ++ N + + F LM + + +TF V KAC + ++ G+ HA++
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 143 GFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLF 202
GF ++V VGNAL+ MYS+C L AR+VF M DVVSW S+I Y + K A+ +F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 203 ERMKLE-GLEP-----------------------------------NQFTYNAIIASYAR 226
RM E G P N F N ++ YA+
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 227 RG---DSNAAFA----------------------------FFSRMTAEGFVPDLVTWNAM 255
G ++N F+ F +M E D+VTW+A
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 256 ISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGL 315
ISG+AQ EAL + + ML SGIKPN VT+ VL G++ G+EIH + +
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 316 HI-------DVFTGSALIDMYSKCGSLKDARTLFEITRIK--NVASWNAMIGCYGKHGMV 366
+ + + LIDMY+KC + AR +F+ K +V +W MIG Y +HG
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 367 DSSIELFERMLEEG--MRANEVTLISVLSACSHGGLVEKGLEI----FRSMKERYGVKIS 420
+ ++EL M EE R N T+ L AC+ + G +I R+ + + +S
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS 516
Query: 421 KEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFF 480
C++DM + G + +A + + M + G +HG + A+ + +E
Sbjct: 517 N----CLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 571
Query: 481 EMGLRKPDGFVML 493
+G K DG +L
Sbjct: 572 RIGF-KLDGVTLL 583
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 278 bits (711), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 271/520 (52%), Gaps = 55/520 (10%)
Query: 25 KSKALRQGKQVHALLCTNDLNIFS----LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFM 80
KS+++ + Q+HA + ++L + L KL YA G + + +F + +P++F+
Sbjct: 38 KSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFL 97
Query: 81 LNWMVMASAFTGNFQEA-IGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVA 139
+ ++ G +A + Y L+ I N+FTFS +LK+C K GK +H
Sbjct: 98 FTAAINTASINGLKDQAFLLYVQLLSSEI-NPNEFTFSSLLKSC----STKSGKLIHTHV 152
Query: 140 TQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAV 199
+ G D V L+D+Y+K G + SA++VF M ER +VS T+MI+
Sbjct: 153 LKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT------------ 200
Query: 200 VLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGF 259
YA++G+ AA A F M D+V+WN MI G+
Sbjct: 201 -----------------------CYAKQGNVEAARALFDSMCER----DIVSWNVMIDGY 233
Query: 260 AQSKRENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALV--CRMGLH 316
AQ N+AL LF+ +L G KP+ +TV L A G+++ GR IH V R+ L+
Sbjct: 234 AQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLN 293
Query: 317 IDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERM 376
+ V TG LIDMYSKCGSL++A +F T K++ +WNAMI Y HG ++ LF M
Sbjct: 294 VKVCTG--LIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM 351
Query: 377 LE-EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSG 435
G++ ++T I L AC+H GLV +G+ IF SM + YG+K EHY C+V +L R+G
Sbjct: 352 QGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAG 411
Query: 436 RMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSN 495
++ AY+ ++ + M + + + C +HG L + E + ++ +V+LSN
Sbjct: 412 QLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSN 471
Query: 496 ICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
I A+ G++ +R +MKEK + K+PG S +E N+ E
Sbjct: 472 IYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHE 511
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 138/318 (43%), Gaps = 38/318 (11%)
Query: 24 MKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLN 82
+KS + + GK +H + L I + + LV VYA GDV SA+ VFD++P ++
Sbjct: 137 LKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSST 196
Query: 83 WMVMASAFTGNFQEAIGYFS--------------------------------LMREFIYR 110
M+ A GN + A F L+ E +
Sbjct: 197 AMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPK 256
Query: 111 CNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRV 170
++ T L AC + ++ G+ +H +V V LIDMYSKCG L A V
Sbjct: 257 PDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLV 316
Query: 171 FHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMK-LEGLEPNQFTYNAIIASYARRGD 229
F+ +D+V+W +MI+GY +A+ LF M+ + GL+P T+ + + A G
Sbjct: 317 FNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGL 376
Query: 230 SNAAFAFFSRMTAE-GFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
N F M E G P + + ++S ++ + A + K M + ++V +
Sbjct: 377 VNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNM---NMDADSVLWS 433
Query: 289 GVLQAGGLTGSIQIGREI 306
VL + L G +G+EI
Sbjct: 434 SVLGSCKLHGDFVLGKEI 451
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 278 bits (711), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 168/502 (33%), Positives = 261/502 (51%), Gaps = 42/502 (8%)
Query: 65 SARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACV 124
+A VFDK+ NV M+ G +EAI +F M + +KFT S V AC
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 125 GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC---GLLCSARRVFHGMFERDVVS 181
L ++ GKQ+H+ A + G +DV +L+DMY+KC G + R+VF M + V+S
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS 338
Query: 182 WTSMISGY---CNVSKVDEAVVLFERMKLEG-LEPNQFTYNAIIASYARRGDSNAAFAFF 237
WT++I+GY CN++ EA+ LF M +G +EPN FT+++ + D
Sbjct: 339 WTALITGYMKNCNLAT--EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396
Query: 238 SRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM---------------------- 275
+ G + N++IS F +S R +A + F+ +
Sbjct: 397 GQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFE 456
Query: 276 ----LVSGIKPNNVTVTGVLQAGGLT-----GSIQIGREIHALVCRMGLHIDVFTGSALI 326
L+S I + V+ A L+ GSI+ G +IH+ V ++GL + +ALI
Sbjct: 457 QAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALI 516
Query: 327 DMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEV 386
MYSKCGS+ A +F +NV SW +MI + KHG +E F +M+EEG++ NEV
Sbjct: 517 SMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEV 576
Query: 387 TLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ 446
T +++LSACSH GLV +G F SM E + +K EHYAC+VD+LCR+G + +A++ +
Sbjct: 577 TYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINT 636
Query: 447 VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
+P + F C +H +L + E+ +P ++ LSNI A G+W E+
Sbjct: 637 MPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEES 696
Query: 507 ENLRKIMKEKNVQKQPGFSRVE 528
+R+ MKE+N+ K+ G S +E
Sbjct: 697 TEMRRKMKERNLVKEGGCSWIE 718
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 184/396 (46%), Gaps = 55/396 (13%)
Query: 92 GNFQEAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSV 150
G+ + A+ LM R+ I + TFS +LK+C+ D + GK VHA + E D +
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 151 GNALIDMYSKCGLLCSARRVFHGMF---ERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
N+LI +YSK G A VF M +RDVVSW++M++ Y N + +A+ +F
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMT--------------------AEGFVP 247
GL PN + Y A+I R SN+ F R+T + FV
Sbjct: 160 LGLVPNDYCYTAVI-----RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214
Query: 248 ------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTG 289
++VTW MI+ Q EA++ F M++SG + + T++
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 290 VLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKC---GSLKDARTLFEITR 346
V A ++ +G+++H+ R GL DV +L+DMY+KC GS+ D R +F+
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRME 332
Query: 347 IKNVASWNAMIGCYGKH-GMVDSSIELFERMLEEG-MRANEVTLISVLSACSHGGLVEKG 404
+V SW A+I Y K+ + +I LF M+ +G + N T S AC + G
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392
Query: 405 LEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEA 440
++ +R G+ + V+ M +S RM +A
Sbjct: 393 KQVLGQAFKR-GLASNSSVANSVISMFVKSDRMEDA 427
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 212/443 (47%), Gaps = 43/443 (9%)
Query: 5 IFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDV 63
I P+++++ LL C++++ R GK VHA L D+ S L + L+ +Y+ GD
Sbjct: 57 IRPMDSVT---FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDS 113
Query: 64 NSARLVFDKIPN-PNVFMLNWMVMASAFTGNFQE--AIGYFSLMREFIYRCNKFTFSIVL 120
A VF+ + +++W M + + N +E AI F E N + ++ V+
Sbjct: 114 AKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVI 173
Query: 121 KACVGLLDIKKGKQVHAVATQMG-FENDVSVGNALIDMYSKC-GLLCSARRVFHGMFERD 178
+AC + G+ + G FE+DV VG +LIDM+ K +A +VF M E +
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN 233
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIA---------------S 223
VV+WT MI+ + EA+ F M L G E ++FT +++ + S
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Query: 224 YARRG----DSNAAFA-FFSRMTAEGFVPD------------LVTWNAMISGFAQS-KRE 265
+A R D + +++ +A+G V D +++W A+I+G+ ++
Sbjct: 294 WAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA 353
Query: 266 NEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
EA+ LF M+ G ++PN+ T + +A G ++G+++ + GL + ++
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRAN 384
+I M+ K ++DA+ FE KN+ S+N + ++ + + +L + E + +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 385 EVTLISVLSACSHGGLVEKGLEI 407
T S+LS ++ G + KG +I
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQI 496
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 199/450 (44%), Gaps = 58/450 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGC---GDVNSARLVFDK 72
L + C + + L GKQ+H+ + L + ++ LV +YA C G V+ R VFD+
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGL-VDDVECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 73 IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYR----CNKFTFSIVLKACVGLLD 128
+ + +V ++W + + + N A +L E I + N FTFS KAC L D
Sbjct: 331 MEDHSV--MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 129 IKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISG 188
+ GKQV A + G ++ SV N++I M+ K + A+R F + E+++VS+ + + G
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 189 YC-----------------------------------NVSKVDEAVVLFERMKLEGLEPN 213
C NV + + + ++ GL N
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508
Query: 214 QFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFK 273
Q NA+I+ Y++ G + A F+ M ++++W +MI+GFA+ L+ F
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENR----NVISWTSMITGFAKHGFAIRVLETFN 564
Query: 274 GMLVSGIKPNNVTVTGVLQAGGLTGSIQIG-REIHALVCRMGLHIDVFTGSALIDMYSKC 332
M+ G+KPN VT +L A G + G R +++ + + + ++D+ +
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624
Query: 333 GSLKDARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTL--- 388
G L DA + +V W +G H + ++LE + NE
Sbjct: 625 GLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE--LDPNEPAAYIQ 682
Query: 389 ISVLSACSHGGLVEKGLEIFRSMKERYGVK 418
+S + AC+ G E+ E+ R MKER VK
Sbjct: 683 LSNIYACA--GKWEESTEMRRKMKERNLVK 710
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 11/263 (4%)
Query: 14 NYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKI 73
N D +GK + +A ++G L +N S+ + ++ ++ + A+ F+ +
Sbjct: 385 NLSDPRVGKQVLGQAFKRG------LASNS----SVANSVISMFVKSDRMEDAQRAFESL 434
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
N+ N + + NF++A S + E + FTF+ +L + I+KG+
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
Q+H+ ++G + V NALI MYSKCG + +A RVF+ M R+V+SWTSMI+G+
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 194 KVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFV-PDLVTW 252
+ F +M EG++PN+ TY AI+++ + G + + F+ M + + P + +
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY 614
Query: 253 NAMISGFAQSKRENEALKLFKGM 275
M+ ++ +A + M
Sbjct: 615 ACMVDLLCRAGLLTDAFEFINTM 637
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 277/547 (50%), Gaps = 50/547 (9%)
Query: 29 LRQGKQVHALLCTNDLNIF--SLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVM 86
L++G++VH + T L F + + LV +YA CG + AR VF + + + N M+
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 87 ASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEN 146
G F EA+ + MR FT L +C L K G+Q+H + ++G +
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 448
Query: 147 DVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK-VDEAVVLFERM 205
+VSV NAL+ +Y++ G L R++F M E D VSW S+I + + EAVV F
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 206 KLEGLEPNQFTY-----------------------------------NAIIASYARRGDS 230
+ G + N+ T+ NA+IA Y + G+
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Query: 231 NAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGV 290
+ FSRM D VTWN+MISG+ ++ +AL L ML +G + ++ V
Sbjct: 569 DGCEKIFSRMAER---RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 625
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
L A +++ G E+HA R L DV GSAL+DMYSKCG L A F ++N
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 685
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMR-ANEVTLISVLSACSHGGLVEKGLEIFR 409
SWN+MI Y +HG + +++LFE M +G + VT + VLSACSH GL+E+G + F
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFE 745
Query: 410 SMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM----YVTNSMAGAFRNGCNI 465
SM + YG+ EH++C+ D+L R+G + + D + ++PM + ++ GA C
Sbjct: 746 SMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC---CRA 802
Query: 466 HGRR-DLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGF 524
+GR+ +L E F++ +V+L N+ AA G W + RK MK+ +V+K+ G+
Sbjct: 803 NGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGY 862
Query: 525 SRVEKRN 531
S V ++
Sbjct: 863 SWVTMKD 869
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 221/475 (46%), Gaps = 58/475 (12%)
Query: 36 HALLCTN--DLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFT-- 91
H+ L N D +++ L + L+ Y GD SAR VFD++P N ++W + S ++
Sbjct: 24 HSRLYKNRLDKDVY-LCNNLINAYLETGDSVSARKVFDEMPLRNC--VSWACIVSGYSRN 80
Query: 92 GNFQEAIGYF-SLMREFIYRCNKFTFSIVLKAC--VGLLDIKKGKQVHAVATQMGFENDV 148
G +EA+ + +++E I+ N++ F VL+AC +G + I G+Q+H + ++ + D
Sbjct: 81 GEHKEALVFLRDMVKEGIFS-NQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 149 SVGNALIDMYSKC-GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V N LI MY KC G + A F + ++ VSW S+IS Y A +F M+
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAF--AFFSRMTAEGFVPDLVTWNAMISGFAQSKRE 265
+G P ++T+ +++ + + + + G + DL + ++S FA+S
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 266 NEALKLFKGMLV-SGIKPNNVTVTGVLQAGGLTGS------------------------- 299
+ A K+F M + + N + V V Q G +
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFP 319
Query: 300 ---------IQIGREIHALVCRMGLHID--VFTGSALIDMYSKCGSLKDARTLFEITRIK 348
++ GRE+H V GL +D V G+ L++MY+KCGS+ DAR +F K
Sbjct: 320 EYSLAEEVGLKKGREVHGHVITTGL-VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
+ SWN+MI ++G ++E ++ M + TLIS LS+C+ + G +I
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 409 -RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVT---NSMAGAF 459
S+K G+ ++ ++ + +G + E + +P + NS+ GA
Sbjct: 439 GESLK--LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGAL 491
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 173/402 (43%), Gaps = 49/402 (12%)
Query: 32 GKQVHALLCTNDLNIFSLKSK-LVGVYAGC-GDVNSARLVFDKIPNPNVFMLNWMVMASA 89
G+Q+H L+ + ++ S L+ +Y C G V A F I N N ++ +
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 90 FTGNFQEAIGYFSLMREFIYRCNKFTF-SIVLKAC-VGLLDIKKGKQVHAVATQMGFEND 147
G+ + A FS M+ R ++TF S+V AC + D++ +Q+ + G D
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERM-K 206
+ VG+ L+ ++K G L AR+VF+ M R+ V+ ++ G +EA LF M
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 207 LEGLEPNQFTY---------------------------------------NAIIASYARR 227
+ + P + N ++ YA+
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 228 GDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTV 287
G A F MT + D V+WN+MI+G Q+ EA++ +K M I P + T+
Sbjct: 363 GSIADARRVFYFMTDK----DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTL 418
Query: 288 TGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRI 347
L + ++G++IH ++G+ ++V +AL+ +Y++ G L + R +F
Sbjct: 419 ISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
Query: 348 KNVASWNAMIGCYGK-HGMVDSSIELFERMLEEGMRANEVTL 388
+ SWN++IG + + ++ F G + N +T
Sbjct: 479 HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 35/204 (17%)
Query: 228 GDSNAAFAFFSRMTAEGFVPDL-------------------------------VTWNAMI 256
G AA F SR+ D+ V+W ++
Sbjct: 15 GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIV 74
Query: 257 SGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQI--GREIHALVCRMG 314
SG++++ EAL + M+ GI N VL+A GS+ I GR+IH L+ ++
Sbjct: 75 SGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLS 134
Query: 315 LHIDVFTGSALIDMYSKC-GSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELF 373
+D + LI MY KC GS+ A F +KN SWN++I Y + G S+ +F
Sbjct: 135 YAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIF 194
Query: 374 ERMLEEGMRANEVTLIS-VLSACS 396
M +G R E T S V +ACS
Sbjct: 195 SSMQYDGSRPTEYTFGSLVTTACS 218
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 303 GREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGK 362
R H+ + + L DV+ + LI+ Y + G AR +F+ ++N SW ++ Y +
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 363 HGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
+G ++ M++EG+ +N+ +SVL AC G V
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 162/510 (31%), Positives = 276/510 (54%), Gaps = 59/510 (11%)
Query: 31 QGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASA 89
+G++VH L S + + L+G+YA G + VFD++P +V N ++ +
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 90 FTGNFQEAIGYFSLM-REFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA-VATQMGFEND 147
G F++AIG F M +E + ++ T L AC L +++ G++++ V T+ FE
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE--FEMS 181
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V +GNAL+DM+ KCG L AR VF M +++V WTSM+ GY + ++DEA VLFER
Sbjct: 182 VRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSP- 240
Query: 208 EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENE 267
V D+V W AM++G+ Q R +E
Sbjct: 241 --------------------------------------VKDVVLWTAMMNGYVQFNRFDE 262
Query: 268 ALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALID 327
AL+LF+ M +GI+P+N + +L TG+++ G+ IH + + +D G+AL+D
Sbjct: 263 ALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVD 322
Query: 328 MYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVT 387
MY+KCG ++ A +F + ++ ASW ++I +GM +++L+ M G+R + +T
Sbjct: 323 MYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAIT 382
Query: 388 LISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQ- 446
++VL+AC+HGG V +G +IF SM ER+ V+ EH +C++D+LCR+G + EA +L+ +
Sbjct: 383 FVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Query: 447 --------VPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICA 498
VP+Y S+ A RN +G +A + E+ ++ + +L+++ A
Sbjct: 443 RGESDETLVPVYC--SLLSAARN----YGNVKIAERVAEKLEKVEVSDSSAHTLLASVYA 496
Query: 499 ADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
+ W + N+R+ MK+ ++K PG S +E
Sbjct: 497 SANRWEDVTNVRRKMKDLGIRKFPGCSSIE 526
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 8/211 (3%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
LL C ++ AL QGK +H + N + + + + LV +YA CG + +A VF +I +
Sbjct: 285 LLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERD 344
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV-H 136
++ A G A+ + M R + TF VL AC + +G+++ H
Sbjct: 345 TASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFH 404
Query: 137 AVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMF----ERDVVSWTSMISGYCNV 192
++ + + + LID+ + GLL A + M E V + S++S N
Sbjct: 405 SMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNY 464
Query: 193 SKVDEAVVLFERMKLEGLEPNQFTYNAIIAS 223
V A + E KLE +E + + + ++AS
Sbjct: 465 GNVKIAERVAE--KLEKVEVSDSSAHTLLAS 493
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 165/526 (31%), Positives = 261/526 (49%), Gaps = 43/526 (8%)
Query: 49 LKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFI 108
+++ L+ +Y G V AR VFD + N +V N M+ G +A+ F M
Sbjct: 154 VQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNES 213
Query: 109 YRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSAR 168
+ T +L C L D++ G+ VH + + + + V NAL++MY KCG + AR
Sbjct: 214 VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEAR 273
Query: 169 RVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY----------- 217
VF M RDV++WT MI+GY V+ A+ L M+ EG+ PN T
Sbjct: 274 FVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDAL 333
Query: 218 ------------------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWN 253
++I+ YA+ + F FS + P W+
Sbjct: 334 KVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP----WS 389
Query: 254 AMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRM 313
A+I+G Q++ ++AL LFK M ++PN T+ +L A ++ IH + +
Sbjct: 390 AIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT 449
Query: 314 GLHIDVFTGSALIDMYSKCGSLKDARTLF----EITRIKNVASWNAMIGCYGKHGMVDSS 369
G + + L+ +YSKCG+L+ A +F E + K+V W A+I YG HG ++
Sbjct: 450 GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
+++F M+ G+ NE+T S L+ACSH GLVE+GL +FR M E Y HY C+VD
Sbjct: 510 LQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVD 569
Query: 430 MLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDG 489
+L R+GR+ EAY+L+ +P T+++ GA C H L + FE+
Sbjct: 570 LLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGN 629
Query: 490 FVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNEFVE 535
+V+L+NI AA G W + E +R +M+ ++K+PG S +E R+ V+
Sbjct: 630 YVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSNSVD 675
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 134/545 (24%), Positives = 235/545 (43%), Gaps = 46/545 (8%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFD 71
SV LL ++++ + K +H + T + S L YA CG + AR +F+
Sbjct: 14 SVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFE 73
Query: 72 KIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRC--NKFTFSIVLKACVGLLDI 129
++P ++ N ++ G + +AI F M +C + +T+ V KA L +
Sbjct: 74 EMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSM 133
Query: 130 KKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGY 189
K G VH + F D V NAL+ MY G + AR VF M RDV+SW +MISGY
Sbjct: 134 KLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGY 193
Query: 190 CNVSKVDEAVVLFERMKLEGLEPNQFTY-------------------------------- 217
+++A+++F+ M E ++ + T
Sbjct: 194 YRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKI 253
Query: 218 ---NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKG 274
NA++ Y + G + A F RM D++TW MI+G+ + AL+L +
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVFDRMERR----DVITWTCMINGYTEDGDVENALELCRL 309
Query: 275 MLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGS 334
M G++PN VT+ ++ G + G+ +H R ++ D+ ++LI MY+KC
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 335 LKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSA 394
+ +F + W+A+I ++ +V ++ LF+RM E + N TL S+L A
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 395 CSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNS 454
+ + + + I + + G S + +V + + G + A+ + + +
Sbjct: 430 YAALADLRQAMNIHCYLT-KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSK 488
Query: 455 ---MAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPD-GFVMLSNICAADGEWHEAENLR 510
+ GA +G +HG A+ + E G+ + F N C+ G E L
Sbjct: 489 DVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLF 548
Query: 511 KIMKE 515
+ M E
Sbjct: 549 RFMLE 553
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 199/452 (44%), Gaps = 58/452 (12%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPN 77
+L C K L G+ VH L+ L + +K+ LV +Y CG ++ AR VFD++ +
Sbjct: 224 MLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRD 283
Query: 78 VFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
V + W M + +T G+ + A+ LM+ R N T + ++ C L + GK +
Sbjct: 284 V--ITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL 341
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H A + +D+ + +LI MY+KC + RVF G + W+++I+G V
Sbjct: 342 HGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELV 401
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVP-------- 247
+A+ LF+RM+ E +EPN T N+++ +YA D A +T GF+
Sbjct: 402 SDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGL 461
Query: 248 ---------------------------DLVTWNAMISGFAQSKRENEALKLFKGMLVSGI 280
D+V W A+ISG+ + AL++F M+ SG+
Sbjct: 462 VHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGV 521
Query: 281 KPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGS----ALIDMYSKCGSLK 336
PN +T T L A +G ++ G + + H S ++D+ + G L
Sbjct: 522 TPNEITFTSALNACSHSGLVEEGLTLFRFMLE---HYKTLARSNHYTCIVDLLGRAGRLD 578
Query: 337 DARTLFEITRIKNVAS-WNAMIGCYGKHGMVD----SSIELFERMLEEGMRANEVTLISV 391
+A L + ++ W A++ H V ++ +LFE LE N V L ++
Sbjct: 579 EAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFE--LEPENTGNYVLLANI 636
Query: 392 LSACSHGGLVEKGLEIFRSMKERYGVKISKEH 423
+A K +E RSM E G++ H
Sbjct: 637 YAALGRW----KDMEKVRSMMENVGLRKKPGH 664
>sp|Q9LUC2|PP231_ARATH Pentatricopeptide repeat-containing protein At3g14730
OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1
Length = 653
Score = 276 bits (706), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 166/550 (30%), Positives = 290/550 (52%), Gaps = 40/550 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDLNIFSLK--SKLVGVYAGCGDVNSARLVFDKIPNPN 77
L +C + K G+Q+H + S + + LV +YA CG + A LVF +
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERD 125
Query: 78 VFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHA 137
VF N ++ G+ +A+ + MR +K+TF +LK +++ K+VH
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGS-DAMELSDVKKVHG 184
Query: 138 VATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD-VVSWTSMISGYCNVSKVD 196
+A ++GF++D VG+ L+ YSK + A++VF + +RD V W ++++GY + + +
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFE 244
Query: 197 EAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMI 256
+A+++F +M+ EG+ ++ T ++++++ GD + + G D+V NA+I
Sbjct: 245 DALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALI 304
Query: 257 SGFAQSKRENEA-------------------------------LKLFKGMLVSGIKPNNV 285
+ +SK EA L LF+ ML SGI+P+ V
Sbjct: 305 DMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIV 364
Query: 286 TVTGVLQAGGLTGSIQIGREIHALVCRMGL----HIDVFTGSALIDMYSKCGSLKDARTL 341
T+T VL G S++ GREIH + GL + F ++L+DMY KCG L+DAR +
Sbjct: 365 TLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMV 424
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ R+K+ ASWN MI YG + ++++F M G++ +E+T + +L ACSH G +
Sbjct: 425 FDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFL 484
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
+G M+ Y + + +HYACV+DML R+ ++ EAY+L P+ + + +
Sbjct: 485 NEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILS 544
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C +HG +DLA+ G+ E+ G+V++SN+ G++ E ++R M+++NV+K
Sbjct: 545 SCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKT 604
Query: 522 PGFSRVEKRN 531
PG S + +N
Sbjct: 605 PGCSWIVLKN 614
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 276 bits (705), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 298/586 (50%), Gaps = 71/586 (12%)
Query: 16 LDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPN 75
+ L+ + K+ Q KQ+HA + S ++ +Y ++ A L+F + +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKS 67
Query: 76 PNVFMLNWMVMASAFTGN--FQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P V L W + FT F +A+ F MR + F VLK+C ++D++ G+
Sbjct: 68 PPV--LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSK--------------------------------- 160
VH ++G + D+ GNAL++MY+K
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 161 CGL---LCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
C + + S RRVF M +DVVS+ ++I+GY ++A+ + M L+P+ FT
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 218 NAIIASYA----------------RRG-DSN--------------AAFAFFSRMTAEGFV 246
++++ ++ R+G DS+ A R+ + +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 247 PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREI 306
D ++WN++++G+ Q+ R NEAL+LF+ M+ + +KP V + V+ A ++ +G+++
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 307 HALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMV 366
H V R G ++F SAL+DMYSKCG++K AR +F+ + + SW A+I + HG
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425
Query: 367 DSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYAC 426
++ LFE M +G++ N+V ++VL+ACSH GLV++ F SM + YG+ EHYA
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 427 VVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRK 486
V D+L R+G++ EAY+ + ++ + T S+ + C++H +LA + E+ F +
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545
Query: 487 PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVEKRNE 532
+V++ N+ A++G W E LR M++K ++K+P S +E +N+
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNK 591
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 276 bits (705), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 278/547 (50%), Gaps = 42/547 (7%)
Query: 20 LGKCMKSKALRQGKQVHALLCTNDL-NIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
LG C +S+ G+Q+H + L N + + L+ +Y+ CG V A VF + + +
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
+ N MV A A A+ F MR+ + FT S V+ C L GK VHA
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 139 ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEA 198
+ ++ ++ +AL+ +YSKCG A VF M E+D+V+W S+ISG C K EA
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 199 VVLFERMKLE-------------------------------------GLEPNQFTYNAII 221
+ +F MK + GL N F +++I
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518
Query: 222 ASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIK 281
Y++ G A F+ M+ E ++V WN+MIS ++++ ++ LF ML GI
Sbjct: 519 DLYSKCGLPEMALKVFTSMSTE----NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIF 574
Query: 282 PNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTL 341
P++V++T VL A T S+ G+ +H R+G+ D +ALIDMY KCG K A +
Sbjct: 575 PDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENI 634
Query: 342 FEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLV 401
F+ + K++ +WN MI YG HG +++ LF+ M + G ++VT +S++SAC+H G V
Sbjct: 635 FKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFV 694
Query: 402 EKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRN 461
E+G IF MK+ YG++ + EHYA +VD+L R+G + EAY ++ +P+ +S+ +
Sbjct: 695 EEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLS 754
Query: 462 GCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
H +L + E+ M + +V L N+ G +EA L +MKEK + KQ
Sbjct: 755 ASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQ 814
Query: 522 PGFSRVE 528
PG S +E
Sbjct: 815 PGCSWIE 821
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 251/530 (47%), Gaps = 54/530 (10%)
Query: 30 RQGKQVHALLCTNDLNIFS-LKSKLVGVYAGCGDVNSARLVFDKIPN-PNVFMLNWMVMA 87
+GKQ+H + N L+ S LK+ L+ +Y G A VF +I + NV + N M++
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 88 SAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFEND 147
+G + ++ + L + + +F+ L AC + G+Q+H +MG ND
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHND 306
Query: 148 VSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKL 207
V +L+ MYSKCG++ A VF + ++ + W +M++ Y A+ LF M+
Sbjct: 307 PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 208 EGLEPNQFT-------------YN----------------------AIIASYARRGDSNA 232
+ + P+ FT YN A++ Y++ G
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPD 426
Query: 233 AFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGML--VSGIKPNNVTVTGV 290
A+ F M + D+V W ++ISG ++ + EALK+F M +KP++ +T V
Sbjct: 427 AYLVFKSMEEK----DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSV 482
Query: 291 LQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNV 350
A +++ G ++H + + GL ++VF GS+LID+YSKCG + A +F +N+
Sbjct: 483 TNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENM 542
Query: 351 ASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRS 410
+WN+MI CY ++ + + SI+LF ML +G+ + V++ SVL A S + KG +
Sbjct: 543 VAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL-HG 601
Query: 411 MKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQV---PMYVTNSMAGAFRNGCNIHG 467
R G+ ++DM + G A ++ +++ + N M + + HG
Sbjct: 602 YTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGS----HG 657
Query: 468 RRDLAVTMGEEFFEMGLRKPDGFVMLSNI--CAADGEWHEAENLRKIMKE 515
A+++ +E + G PD LS I C G E +N+ + MK+
Sbjct: 658 DCITALSLFDEMKKAG-ESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQ 706
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 194/445 (43%), Gaps = 96/445 (21%)
Query: 114 FTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG 173
FTF +LKAC L ++ GK +H +G+ D + +L++MY KCG L A +VF G
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 174 MFE-------RDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYAR 226
+ RDV W SMI GY + E V F RM + G+ P+ F+ + +++ +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 227 RGDSN-------AAFAFFSRMTAEGFV---------------------------PDLVTW 252
G+ F + + + F+ ++V W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
N MI GF S +L L+ + +K + + TG L A + + GR+IH V +
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 313 MGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIEL 372
MGLH D + ++L+ MYSKCG + +A T+F K + WNAM+ Y ++ S+++L
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 373 FERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLE--------------- 406
F M ++ + + TL +V+S CS H L ++ ++
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSK 420
Query: 407 ---------IFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLL------------- 444
+F+SM+E+ V + ++ LC++G+ EA +
Sbjct: 421 CGCDPDAYLVFKSMEEKDMVA-----WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPD 475
Query: 445 RQVPMYVTNSMAG--AFRNGCNIHG 467
+ VTN+ AG A R G +HG
Sbjct: 476 SDIMTSVTNACAGLEALRFGLQVHG 500
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 198/449 (44%), Gaps = 54/449 (12%)
Query: 12 SVNYLDCLLGKCMKSKALRQGKQVHA--LLCTNDLNIFSLKSKLVGVYAGCGDVNSARLV 69
SV LL C L GK +H ++ + F + + LV +Y CG ++ A V
Sbjct: 59 SVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPF-IATSLVNMYVKCGFLDYAVQV 117
Query: 70 FDK-------IPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKA 122
FD + +V + N M+ F+E +G F M F R + F+ SIV+
Sbjct: 118 FDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSV 177
Query: 123 CV--GLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFER-DV 179
G ++GKQ+H + + D + ALIDMY K GL A RVF + ++ +V
Sbjct: 178 MCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNV 237
Query: 180 VSWTSMISGYCNVSKVDEAVVLF-----ERMKL--------------------------- 207
V W MI G+ + ++ L+ +KL
Sbjct: 238 VLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCD 297
Query: 208 ---EGLEPNQFTYNAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKR 264
GL + + ++++ Y++ G A FS + + L WNAM++ +A++
Sbjct: 298 VVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDK----RLEIWNAMVAAYAENDY 353
Query: 265 ENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSA 324
AL LF M + P++ T++ V+ + G G+ +HA + + + SA
Sbjct: 354 GYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESA 413
Query: 325 LIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERML--EEGMR 382
L+ +YSKCG DA +F+ K++ +W ++I K+G ++++F M ++ ++
Sbjct: 414 LLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLK 473
Query: 383 ANEVTLISVLSACSHGGLVEKGLEIFRSM 411
+ + SV +AC+ + GL++ SM
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSM 502
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 275 bits (704), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 270/522 (51%), Gaps = 52/522 (9%)
Query: 51 SKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGN---------FQEAIGYF 101
S + +YA GD+ S+R VFD N+ + W M + N F EAIG
Sbjct: 255 SSAISMYAELGDIESSRRVFDSCVERNIEV--WNTMIGVYVQNDCLVESIELFLEAIG-- 310
Query: 102 SLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC 161
+E + ++ T+ + A L ++ G+Q H ++ E + + N+L+ MYS+C
Sbjct: 311 --SKEIV--SDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRC 366
Query: 162 GLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAII 221
G + + VF M ERDVVSW +MIS + DE ++L M+ +G + + T A++
Sbjct: 367 GSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL 426
Query: 222 ASYARR-----GDSNAAFAFFSRMTAEGFVP---------------------------DL 249
++ + G AF + EG D
Sbjct: 427 SAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQ 486
Query: 250 VTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHAL 309
TWN+MISG+ Q+ + +F+ ML I+PN VTV +L A GS+ +G+++H
Sbjct: 487 ATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGF 546
Query: 310 VCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSS 369
R L +VF SAL+DMYSK G++K A +F T+ +N ++ MI YG+HGM + +
Sbjct: 547 SIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERA 606
Query: 370 IELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVD 429
I LF M E G++ + +T ++VLSACS+ GL+++GL+IF M+E Y ++ S EHY C+ D
Sbjct: 607 ISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITD 666
Query: 430 MLCRSGRMVEAYDLLRQVPMYVT-NSMAGAFRNGCNIHGRRDLAVTMGEEF--FEMGLRK 486
ML R GR+ EAY+ ++ + + G+ C +HG +LA T+ E F+ G
Sbjct: 667 MLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNF 726
Query: 487 PDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
V+LSN+ A + +W + +R+ M+EK ++K+ G S +E
Sbjct: 727 SGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIE 768
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 157/575 (27%), Positives = 260/575 (45%), Gaps = 82/575 (14%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALL--CTNDLNIFSLKSKLVGVYAGCGDV- 63
P N L C ++K L+ GK VH L C + + + + L+ +Y C +
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRV-VHNSLMNMYVSCLNAP 159
Query: 64 -----NSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSI 118
+ R VFD + NV N ++ TG EA F +M + + +F
Sbjct: 160 DCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVN 219
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFE--NDVSVGNALIDMYSKCGLLCSARRVFHGMFE 176
V A IKK + + ++G E D+ V ++ I MY++ G + S+RRVF E
Sbjct: 220 VFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVE 279
Query: 177 RDVVSWTSMISGYCNVSKVDEAVVLF-ERMKLEGLEPNQFTY------------------ 217
R++ W +MI Y + E++ LF E + + + ++ TY
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ 339
Query: 218 -----------------NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFA 260
N+++ Y+R G + +F F M D+V+WN MIS F
Sbjct: 340 FHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRER----DVVSWNTMISAFV 395
Query: 261 QSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVF 320
Q+ ++E L L M G K + +TVT +L A + +IG++ HA + R G+ +
Sbjct: 396 QNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM 455
Query: 321 TGSALIDMYSKCGSLKDARTLFEITRI--KNVASWNAMIGCYGKHGMVDSSIELFERMLE 378
S LIDMYSK G ++ ++ LFE + ++ A+WN+MI Y ++G + + +F +MLE
Sbjct: 456 N-SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Query: 379 EGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEH------YACVVDMLC 432
+ +R N VT+ S+L ACS G V+ G K+ +G I + + +VDM
Sbjct: 515 QNIRPNAVTVASILPACSQIGSVDLG-------KQLHGFSIRQYLDQNVFVASALVDMYS 567
Query: 433 RSGRMVEAYDLLRQVP-----MYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
++G + A D+ Q Y T + G HG + A+++ E G+ KP
Sbjct: 568 KAGAIKYAEDMFSQTKERNSVTYTTMIL------GYGQHGMGERAISLFLSMQESGI-KP 620
Query: 488 DG--FVMLSNICAADGEWHEAENLRKIMKE-KNVQ 519
D FV + + C+ G E + + M+E N+Q
Sbjct: 621 DAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQ 655
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 195/443 (44%), Gaps = 71/443 (16%)
Query: 48 SLKSKLVGVYAGCGDVNS--ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAIGYFSLMR 105
S++S+L + C D N AR +FD IP P + N +++ EA+ ++S M+
Sbjct: 41 SIRSRLSKI---CQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMK 97
Query: 106 EF--IYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKC-- 161
+ C+ +T+S LKAC ++K GK VH + + V N+L++MY C
Sbjct: 98 KTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLN 157
Query: 162 GLLC----SARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
C R+VF M ++VV+W ++IS Y + EA F M ++P+ ++
Sbjct: 158 APDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSF 217
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEG--FVPDLV------------------------- 250
+ + + A F+ M G +V DL
Sbjct: 218 VNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC 277
Query: 251 ------TWNAMISGFAQSKRENEALKLFKGMLVSG-IKPNNVTVTGVLQAGGLTGSIQIG 303
WN MI + Q+ E+++LF + S I + VT A +++G
Sbjct: 278 VERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELG 337
Query: 304 REIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKH 363
R+ H V + + + ++L+ MYS+CGS+ + +F R ++V SWN MI + ++
Sbjct: 338 RQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQN 397
Query: 364 GMVDSSIELFERMLEEGMRANEVTLISVLSACS-----------HGGLVEKGLEIFRSMK 412
G+ D + L M ++G + + +T+ ++LSA S H L+ +G++ F M
Sbjct: 398 GLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMN 456
Query: 413 ERYGVKISKEHYACVVDMLCRSG 435
+ ++DM +SG
Sbjct: 457 ------------SYLIDMYSKSG 467
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 6/278 (2%)
Query: 1 MNRLIFPINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGC 60
M + F I+ ++V LL + GKQ HA L + + S L+ +Y+
Sbjct: 410 MQKQGFKIDYITVT---ALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKS 466
Query: 61 GDVNSARLVFDKIPNPNVFMLNWMVMASAFT--GNFQEAIGYFSLMREFIYRCNKFTFSI 118
G + ++ +F+ W M S +T G+ ++ F M E R N T +
Sbjct: 467 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVAS 526
Query: 119 VLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERD 178
+L AC + + GKQ+H + + + +V V +AL+DMYSK G + A +F ER+
Sbjct: 527 ILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERN 586
Query: 179 VVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNAAFAFFS 238
V++T+MI GY + A+ LF M+ G++P+ T+ A++++ + G + F
Sbjct: 587 SVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFE 646
Query: 239 RM-TAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGM 275
M P + + + R NEA + KG+
Sbjct: 647 EMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGL 684
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 275 bits (703), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 157/508 (30%), Positives = 269/508 (52%), Gaps = 52/508 (10%)
Query: 39 LCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNWMVMASAFTGNFQEAI 98
LC +D + F+ + L+G G +F +I NPN+F+ N ++ + +A
Sbjct: 53 LCVDD-STFNKPTNLLGYAYG---------IFSQIQNPNLFVFNLLIRCFSTGAEPSKAF 102
Query: 99 GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMY 158
G+++ M + + TF ++KA + + G+Q H+ + GF+NDV V N+L+ MY
Sbjct: 103 GFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMY 162
Query: 159 SKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYN 218
+ CG + +A R+F M RDVVSWTSM++GYC V+ A +F+ M P++
Sbjct: 163 ANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEM------PHR---- 212
Query: 219 AIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS 278
+L TW+ MI+G+A++ +A+ LF+ M
Sbjct: 213 -----------------------------NLFTWSIMINGYAKNNCFEKAIDLFEFMKRE 243
Query: 279 GIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDA 338
G+ N + V+ + G+++ G + V + + +++ G+AL+DM+ +CG ++ A
Sbjct: 244 GVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKA 303
Query: 339 RTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHG 398
+FE + SW+++I HG ++ F +M+ G +VT +VLSACSHG
Sbjct: 304 IHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHG 363
Query: 399 GLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGA 458
GLVEKGLEI+ +MK+ +G++ EHY C+VDML R+G++ EA + + ++ + + GA
Sbjct: 364 GLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGA 423
Query: 459 FRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNV 518
C I+ ++A +G ++ +V+LSNI A G+W + E+LR +MKEK V
Sbjct: 424 LLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLV 483
Query: 519 QKQPGFSRVE---KRNEFVEKEVQNESK 543
+K PG+S +E K N+F + Q +
Sbjct: 484 KKPPGWSLIEIDGKINKFTMGDDQKHPE 511
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 283/581 (48%), Gaps = 78/581 (13%)
Query: 19 LLGKCMKSKALRQGKQVHA-LLCTNDLNIFSLKSKLVGVYA--GCGDVNSARLVFDKIPN 75
L+ +C+ +LRQ KQ H ++ T + SKL + A + AR VFD+IP
Sbjct: 36 LIERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 76 PNVFMLNWMVMASAFTGNFQEAI-GYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQ 134
PN F N ++ A A + +I + ++ E NK+TF ++KA + + G+
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 135 VHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSK 194
+H +A + +DV V N+LI Y CG L SA +VF + E+DVVSW SMI+G+
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 195 VDEAVVLFERMKLEGLEPNQFTY-----------------------------------NA 219
D+A+ LF++M+ E ++ + T NA
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 220 IIASYARRGDSNAAFAFFSRMTAEGFVPDLVTW--------------------------- 252
++ Y + G A F M + D VTW
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEK----DNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 328
Query: 253 ----NAMISGFAQSKRENEALKLFKGM-LVSGIKPNNVTVTGVLQAGGLTGSIQIGREIH 307
NA+IS + Q+ + NEAL +F + L +K N +T+ L A G++++GR IH
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 308 ALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVD 367
+ + + G+ ++ SALI MYSKCG L+ +R +F ++V W+AMIG HG +
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448
Query: 368 SSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACV 427
++++F +M E ++ N VT +V ACSH GLV++ +F M+ YG+ ++HYAC+
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508
Query: 428 VDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFEMGLRKP 487
VD+L RSG + +A + +P+ + S+ GA C IH +LA E+ R
Sbjct: 509 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRND 568
Query: 488 DGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE 528
V+LSNI A G+W LRK M+ ++K+PG S +E
Sbjct: 569 GAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 609
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/563 (30%), Positives = 274/563 (48%), Gaps = 78/563 (13%)
Query: 11 LSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFS--LKSKLVGVYAGCGD------ 62
L + L LL +C +K+L+QGK +H L + L + L+G+Y CG
Sbjct: 44 LPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACK 103
Query: 63 --------------------VNS-----ARLVFDKIPNPNVFMLNWMVMASAFTGNFQEA 97
V S AR+VFD +P +V N MV+ A GN EA
Sbjct: 104 VFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEA 163
Query: 98 IGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMGFENDVSVGNALIDM 157
+ ++ R + N+F+F+ +L ACV ++ +Q H GF ++V + ++ID
Sbjct: 164 LWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 158 YSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTY 217
Y+KCG + SA+R F M +D+ WT++ISGY
Sbjct: 224 YAKCGQMESAKRCFDEMTVKDIHIWTTLISGY---------------------------- 255
Query: 218 NAIIASYARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLV 277
A+ GD AA F M + + V+W A+I+G+ + N AL LF+ M+
Sbjct: 256 -------AKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMIA 304
Query: 278 SGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKD 337
G+KP T + L A S++ G+EIH + R + + S+LIDMYSK GSL+
Sbjct: 305 LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEA 364
Query: 338 ARTLFEITRIK-NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACS 396
+ +F I K + WN MI +HG+ ++ + + M++ ++ N TL+ +L+ACS
Sbjct: 365 SERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACS 424
Query: 397 HGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMA 456
H GLVE+GL F SM ++G+ +EHYAC++D+L R+G E + ++P +
Sbjct: 425 HSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIW 484
Query: 457 GAFRNGCNIHGRRDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEK 516
A C IHG +L +E ++ +++LS+I A G+W E LR +MK++
Sbjct: 485 NAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKR 544
Query: 517 NVQKQPGFSRVEKRNEFVEKEVQ 539
V K+ S +E +EK+V+
Sbjct: 545 RVNKEKAVSWIE-----IEKKVE 562
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 90/186 (48%), Gaps = 6/186 (3%)
Query: 253 NAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCR 312
+ +S A ++A+ + + GI+ + +LQ G T S++ G+ IH +
Sbjct: 15 QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKI 74
Query: 313 MGL-HIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIE 371
G + + LI MY KCG DA +F+ ++N+ SWN M+ Y K GM+ +
Sbjct: 75 TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARV 134
Query: 372 LFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDML 431
+F+ M E + V+ +++ + G + + L ++ + R G+K ++ +A ++
Sbjct: 135 VFDSMPERDV----VSWNTMVIGYAQDGNLHEALWFYKEFR-RSGIKFNEFSFAGLLTAC 189
Query: 432 CRSGRM 437
+S ++
Sbjct: 190 VKSRQL 195
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/224 (18%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 176 ERDVVSWTSMISGYCNVSKVDEAVVLFERMKLEGLEPNQFTYNAIIASYARRGDSNA--- 232
+R + S +S + +++ +AV E + +G+ + ++ + + + GD+ +
Sbjct: 8 KRPICVAQSFLSKHATKAELSQAVSRLESLTQQGI---RLPFDLLASLLQQCGDTKSLKQ 64
Query: 233 AFAFFSRMTAEGFV-PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVL 291
+ GF P+ + N +I + + + +A K+F M + + N V+G
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSG-- 122
Query: 292 QAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVA 351
Y K G L AR +F+ ++V
Sbjct: 123 -------------------------------------YVKSGMLVRARVVFDSMPERDVV 145
Query: 352 SWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSAC 395
SWN M+ Y + G + ++ ++ G++ NE + +L+AC
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTAC 189
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 182/596 (30%), Positives = 284/596 (47%), Gaps = 72/596 (12%)
Query: 7 PINNLSVNYLDCLLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNS- 65
PI + + N +L K K+L KQ+HA + +N L S L + +N
Sbjct: 6 PIASTAAN---TILEKLSFCKSLNHIKQLHAHILRTVIN-HKLNSFLFNLSVSSSSINLS 61
Query: 66 -ARLVFDKIPNP-NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKAC 123
A VF IP+P + N + + + + I ++ +R R ++F+F +LKA
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 124 VGLLDIKKGKQVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWT 183
+ + +G ++H VA ++ D V +DMY+ CG + AR VF M RDVV+W
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 184 SMISGYCNVSKVDEAVVLFERMKLEGLEPNQFT---------------YN---------- 218
+MI YC VDEA LFE MK + P++ YN
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 219 ----------AIIASYARRGDSNAAFAFFSRMTAEGFV---------------------- 246
A++ YA G + A FF +M+
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 247 -----PDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQ 301
DLV W MIS + +S EAL++F+ M SGIKP+ V++ V+ A G +
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 302 IGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIKNVASWNAMIGCYG 361
+ +H+ + GL ++ +ALI+MY+KCG L R +FE +NV SW++MI
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 362 KHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIFRSMKERYGVKISK 421
HG ++ LF RM +E + NEVT + VL CSH GLVE+G +IF SM + Y +
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 422 EHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGRRDLAVTMGEEFFE 481
EHY C+VD+ R+ + EA +++ +P+ + G+ + C IHG +L + E
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Query: 482 MGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFSRVE---KRNEFV 534
+ V++SNI A + W + N+R++M+EKNV K+ G SR++ K +EF+
Sbjct: 542 LEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFL 597
>sp|Q9LJR6|PP253_ARATH Putative pentatricopeptide repeat-containing protein At3g25060,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3
SV=1
Length = 601
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/548 (30%), Positives = 275/548 (50%), Gaps = 48/548 (8%)
Query: 26 SKALRQGKQVHALLCT--NDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNVFMLNW 83
SK R Q+HA + + N LN S+ L+ G+++ AR VFD++P V + N
Sbjct: 27 SKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNS 86
Query: 84 MVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAVATQMG 143
M++ + N E + + M + + TF++ +KAC+ L ++KG+ V A G
Sbjct: 87 MIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFG 146
Query: 144 FENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKVDEAVVLFE 203
++NDV V ++++++Y KCG + A +F M +RDV+ WT+M++G+ K +AV +
Sbjct: 147 YKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYR 206
Query: 204 RMKLEG-----------------------------------LEPNQFTYNAIIASYARRG 228
M+ EG L N +++ YA+ G
Sbjct: 207 EMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVG 266
Query: 229 DSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVSGIKPNNVTVT 288
A FSRM V+W ++ISGFAQ+ N+A + M G +P+ VT+
Sbjct: 267 FIEVASRVFSRM----MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLV 322
Query: 289 GVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFEITRIK 348
GVL A GS++ GR +H + + + +D T +AL+DMYSKCG+L +R +FE K
Sbjct: 323 GVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRK 381
Query: 349 NVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEKGLEIF 408
++ WN MI CYG HG + LF +M E + + T S+LSA SH GLVE+G F
Sbjct: 382 DLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWF 441
Query: 409 RSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNIHGR 468
M +Y ++ S++HY C++D+L R+GR+ EA D++ + + A +GC H
Sbjct: 442 SVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRN 501
Query: 469 RDLAVTMGEEFFEMGLRKPDGF---VMLSNICAADGEWHEAENLRKIMKEKNVQKQPGFS 525
+ + ++ PD ++SN A +W E +RK+M+ ++K PG+S
Sbjct: 502 LSVGDIAANKILQL---NPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYS 558
Query: 526 RVEKRNEF 533
+E E
Sbjct: 559 AIEVNGEL 566
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLKSKLVGVYAGCGDVNSARLVFDKIPNPNV 78
+L C + +L+ G+ VH + + + L+ +Y+ CG ++S+R +F+ + ++
Sbjct: 324 VLVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDL 383
Query: 79 FMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQVHAV 138
N M+ GN QE + F M E + TF+ +L A +++G+ +V
Sbjct: 384 VCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSV 443
Query: 139 -ATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHG-MFERDVVSWTSMISGYCN 191
+ + LID+ ++ G + A + + + + W +++SG N
Sbjct: 444 MINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCIN 498
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 289/562 (51%), Gaps = 60/562 (10%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDL--NIFSLKSKLVGVYAGCGD---VNSARLVFDKI 73
+L + ++L + Q+H L+ + + N+ L S+L+ C + ++ AR VF+ I
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPL-SRLIDFCTTCPETMNLSYARSVFESI 67
Query: 74 PNPNVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGK 133
P+V++ N M+ + + N +A+ ++ M Y + FTF VLKAC GL DI+ G
Sbjct: 68 DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGS 127
Query: 134 QVHAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVS 193
VH + GFE ++ V L+ MY CG + RVF + + +VV+W S+ISG+ N +
Sbjct: 128 CVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNN 187
Query: 194 KVDEAVVLFERMKLEGLEPNQFT------------------------------------- 216
+ +A+ F M+ G++ N+
Sbjct: 188 RFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKV 247
Query: 217 -YNAIIAS-----YARRGDSNAAFAFFSRMTAEGFVPDLVTWNAMISGFAQSKRENEALK 270
+N I+A+ YA+ GD A F M LV+WN++I+G++Q+ EAL
Sbjct: 248 GFNVILATSLIDMYAKCGDLRTARYLFDGMPER----TLVSWNSIITGYSQNGDAEEALC 303
Query: 271 LFKGMLVSGIKPNNVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYS 330
+F ML GI P+ VT V++A + G Q+G+ IHA V + G D AL++MY+
Sbjct: 304 MFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYA 363
Query: 331 KCGSLKDARTLFEITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEG-MRANEVTLI 389
K G + A+ FE K+ +W +I HG + ++ +F+RM E+G + +T +
Sbjct: 364 KTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYL 423
Query: 390 SVLSACSHGGLVEKGLEIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPM 449
VL ACSH GLVE+G F M++ +G++ + EHY C+VD+L R+GR EA L++ +P+
Sbjct: 424 GVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPV 483
Query: 450 YVTNSMAGAFRNGCNIHGRRDLA---VTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEA 506
++ GA NGC+IH +L +M E E+G +V+LSNI A G W +
Sbjct: 484 KPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELG---SGIYVLLSNIYAKAGRWADV 540
Query: 507 ENLRKIMKEKNVQKQPGFSRVE 528
+ +R+ MK K V K G S VE
Sbjct: 541 KLIRESMKSKRVDKVLGHSSVE 562
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 275/548 (50%), Gaps = 43/548 (7%)
Query: 19 LLGKCMKSKALRQGKQVHALLCTNDLNIFSLK-SKLVGVYAGCGDVNS-ARLVFDKIPNP 76
L+ +C +LR KQ+ L T DL L +K+V D S + ++ I +
Sbjct: 12 LISRC---SSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 77 -NVFMLNWMVMASAFTGNFQEAIGYFSLMREFIYRCNKFTFSIVLKACVGLLDIKKGKQV 135
+ F N ++ + A + I + + + FTF V KAC I++GKQ+
Sbjct: 69 LSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQI 128
Query: 136 HAVATQMGFENDVSVGNALIDMYSKCGLLCSARRVFHGMFERDVVSWTSMISGYCNVSKV 195
H + T+MGF +D+ V N+L+ Y CG +A +VF M RDVVSWT +I+G+
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLY 188
Query: 196 DEAVVLFERMKLEGLEPNQFTYNAIIASYARRG----------------------DSNAA 233
EA+ F +M +E PN TY ++ S R G NA
Sbjct: 189 KEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 234 FAFFS---------RMTAEGFVPDLVTWNAMISGFAQSKRENEALKLFKGMLVS-GIKPN 283
+ R+ E D V+WN+MISG +R EA+ LF M S GIKP+
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 284 NVTVTGVLQAGGLTGSIQIGREIHALVCRMGLHIDVFTGSALIDMYSKCGSLKDARTLFE 343
+T VL A G++ GR +H + G+ D G+A++DMY+KCG ++ A +F
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 344 ITRIKNVASWNAMIGCYGKHGMVDSSIELFERMLEEGMRANEVTLISVLSACSHGGLVEK 403
R KNV +WNA++G HG S+ FE M++ G + N VT ++ L+AC H GLV++
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 404 GLEIFRSMKER-YGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNG 462
G F MK R Y + EHY C++D+LCR+G + EA +L++ +P+ + GA +
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485
Query: 463 CNIHGR-RDLAVTMGEEFFEMGLRKPDGFVMLSNICAADGEWHEAENLRKIMKEKNVQKQ 521
C G +L + + F ++ +V+LSNI AA+ W + +R++MK K + K
Sbjct: 486 CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545
Query: 522 PGFSRVEK 529
PG S +EK
Sbjct: 546 PGSSYIEK 553
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,844,119
Number of Sequences: 539616
Number of extensions: 7848242
Number of successful extensions: 32522
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 23369
Number of HSP's gapped (non-prelim): 2468
length of query: 544
length of database: 191,569,459
effective HSP length: 122
effective length of query: 422
effective length of database: 125,736,307
effective search space: 53060721554
effective search space used: 53060721554
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)