Query 044359
Match_columns 401
No_of_seqs 209 out of 2024
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 02:34:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044359.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044359hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02932 3-ketoacyl-CoA syntha 100.0 1.3E-71 2.8E-76 553.9 35.6 400 2-401 66-476 (478)
2 PLN02854 3-ketoacyl-CoA syntha 100.0 2.3E-69 5E-74 540.4 37.6 400 2-401 112-518 (521)
3 PLN02377 3-ketoacyl-CoA syntha 100.0 5.5E-69 1.2E-73 538.0 38.1 400 2-401 96-500 (502)
4 PLN02192 3-ketoacyl-CoA syntha 100.0 1.1E-68 2.4E-73 534.4 37.1 393 2-401 100-505 (511)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 1.7E-65 3.8E-70 503.8 37.9 400 2-401 58-465 (466)
6 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 1.3E-62 2.9E-67 466.2 24.7 316 1-379 1-323 (323)
7 PLN03172 chalcone synthase fam 100.0 2.1E-54 4.6E-59 426.8 34.4 347 3-379 16-387 (393)
8 PLN03168 chalcone synthase; Pr 100.0 9E-54 2E-58 422.5 32.8 349 3-381 15-388 (389)
9 PLN03169 chalcone synthase fam 100.0 1.1E-53 2.4E-58 422.8 32.6 348 3-379 21-389 (391)
10 COG3424 BcsA Predicted naringe 100.0 3.3E-53 7.1E-58 385.4 29.3 345 4-380 2-354 (356)
11 PLN03170 chalcone synthase; Pr 100.0 3E-53 6.5E-58 420.0 31.6 349 3-380 20-392 (401)
12 cd00831 CHS_like Chalcone and 100.0 5.1E-53 1.1E-57 416.2 33.1 343 3-376 1-361 (361)
13 PLN03173 chalcone synthase; Pr 100.0 5.2E-53 1.1E-57 416.6 32.2 348 3-380 16-388 (391)
14 PRK12880 3-oxoacyl-(acyl carri 100.0 1.3E-53 2.9E-58 417.4 27.4 333 1-384 5-344 (353)
15 PLN03171 chalcone synthase-lik 100.0 2.4E-52 5.1E-57 414.0 32.7 352 3-381 22-397 (399)
16 PRK05963 3-oxoacyl-(acyl carri 100.0 5.6E-52 1.2E-56 403.5 29.9 317 3-378 3-326 (326)
17 PLN02326 3-oxoacyl-[acyl-carri 100.0 5E-51 1.1E-55 403.7 27.3 326 3-378 47-379 (379)
18 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 7.7E-51 1.7E-55 395.4 26.5 318 3-379 2-326 (326)
19 PRK07204 3-oxoacyl-(acyl carri 100.0 7.2E-50 1.6E-54 389.2 30.6 309 2-378 3-329 (329)
20 PRK12879 3-oxoacyl-(acyl carri 100.0 2.8E-49 6.2E-54 384.3 30.5 316 2-379 3-325 (325)
21 PRK09258 3-oxoacyl-(acyl carri 100.0 6.2E-49 1.3E-53 384.0 28.9 321 1-378 3-338 (338)
22 PRK06840 hypothetical protein; 100.0 1.4E-47 3E-52 374.6 30.8 320 2-379 3-336 (339)
23 cd00830 KAS_III Ketoacyl-acyl 100.0 1E-47 2.2E-52 372.5 28.6 307 3-376 1-320 (320)
24 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 6.3E-47 1.4E-51 366.8 28.1 311 3-378 2-318 (318)
25 PRK09352 3-oxoacyl-(acyl carri 100.0 7.9E-46 1.7E-50 359.2 30.2 314 1-379 1-319 (319)
26 PRK06816 3-oxoacyl-(acyl carri 100.0 5.7E-46 1.2E-50 367.5 28.1 341 3-379 2-378 (378)
27 PRK04262 hypothetical protein; 100.0 1.2E-45 2.7E-50 361.6 27.1 309 3-384 2-314 (347)
28 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 1.8E-45 3.9E-50 359.5 25.5 307 3-384 1-313 (345)
29 PRK07515 3-oxoacyl-(acyl carri 100.0 1.2E-44 2.6E-49 357.9 27.1 340 3-378 2-371 (372)
30 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 3.2E-43 6.8E-48 325.2 28.0 282 2-283 7-288 (290)
31 cd00827 init_cond_enzymes "ini 100.0 7.5E-42 1.6E-46 331.9 25.5 309 3-376 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 2.3E-38 5E-43 312.9 30.1 308 4-380 1-319 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 1.6E-36 3.4E-41 302.0 25.9 311 2-381 3-373 (459)
34 COG3425 PksG 3-hydroxy-3-methy 100.0 3E-35 6.4E-40 280.0 23.0 314 2-384 1-316 (377)
35 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 4.5E-34 9.8E-39 284.1 25.2 318 3-381 1-376 (454)
36 PF00195 Chal_sti_synt_N: Chal 100.0 1.2E-34 2.7E-39 261.6 16.6 199 2-202 13-226 (226)
37 cd00327 cond_enzymes Condensin 100.0 1.5E-28 3.3E-33 230.2 17.4 235 78-376 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 3.2E-26 7E-31 222.9 14.9 252 78-376 11-332 (332)
39 PF08541 ACP_syn_III_C: 3-Oxoa 99.9 7.1E-22 1.5E-26 155.5 7.9 83 293-378 8-90 (90)
40 KOG1393 Hydroxymethylglutaryl- 99.8 2.7E-19 5.8E-24 167.8 16.3 316 3-384 11-382 (462)
41 PF02797 Chal_sti_synt_C: Chal 99.8 3.7E-19 7.9E-24 152.3 15.5 118 240-379 26-150 (151)
42 PRK06147 3-oxoacyl-(acyl carri 99.8 2.5E-18 5.5E-23 168.3 21.4 313 1-380 2-344 (348)
43 PF01154 HMG_CoA_synt_N: Hydro 99.8 1.5E-19 3.3E-24 155.7 11.0 166 2-202 3-173 (174)
44 TIGR02845 spore_V_AD stage V s 99.8 2.6E-17 5.6E-22 155.0 20.2 117 78-204 50-174 (327)
45 PRK08304 stage V sporulation p 99.7 1.2E-15 2.7E-20 144.0 17.8 117 78-204 56-180 (337)
46 cd00834 KAS_I_II Beta-ketoacyl 99.6 4.6E-14 1E-18 141.3 22.7 185 2-203 1-243 (406)
47 cd00751 thiolase Thiolase are 99.6 3.9E-14 8.4E-19 140.9 19.9 94 78-172 22-116 (386)
48 PRK05656 acetyl-CoA acetyltran 99.6 6.8E-14 1.5E-18 139.2 19.7 94 78-172 26-120 (393)
49 TIGR01930 AcCoA-C-Actrans acet 99.6 1.4E-13 3.1E-18 136.7 19.4 94 78-172 21-115 (386)
50 PF08545 ACP_syn_III: 3-Oxoacy 99.5 9.8E-15 2.1E-19 112.0 6.5 66 133-203 1-66 (80)
51 PRK09051 beta-ketothiolase; Pr 99.5 7.4E-13 1.6E-17 131.7 21.6 94 78-172 27-122 (394)
52 cd00828 elong_cond_enzymes "el 99.5 1.4E-12 3E-17 130.8 21.1 121 77-203 71-243 (407)
53 PRK06064 acetyl-CoA acetyltran 99.5 2.5E-12 5.5E-17 128.1 22.0 93 78-172 22-117 (389)
54 smart00825 PKS_KS Beta-ketoacy 99.5 1.2E-12 2.5E-17 132.0 19.8 119 78-203 87-247 (424)
55 PRK08313 acetyl-CoA acetyltran 99.5 4.7E-12 1E-16 125.8 21.0 93 78-172 24-118 (386)
56 cd00829 SCP-x_thiolase Thiolas 99.5 1.2E-11 2.6E-16 122.7 23.4 93 78-172 16-109 (375)
57 PRK05790 putative acyltransfer 99.5 6.9E-12 1.5E-16 125.1 21.2 93 78-171 26-119 (393)
58 PRK06501 3-oxoacyl-(acyl carri 99.4 4E-11 8.7E-16 120.7 23.8 182 3-203 12-257 (425)
59 cd00833 PKS polyketide synthas 99.4 2.5E-11 5.4E-16 122.1 22.2 120 77-203 86-247 (421)
60 PRK06025 acetyl-CoA acetyltran 99.4 1.7E-11 3.7E-16 121.5 19.9 94 78-172 29-124 (417)
61 PRK12404 stage V sporulation p 99.4 1.6E-11 3.5E-16 115.6 18.5 119 76-203 52-177 (334)
62 PRK06445 acetyl-CoA acetyltran 99.4 2.2E-11 4.7E-16 121.4 19.6 91 78-171 32-126 (394)
63 PRK07314 3-oxoacyl-(acyl carri 99.4 1.2E-10 2.6E-15 117.0 24.5 186 1-203 1-244 (411)
64 PRK07661 acetyl-CoA acetyltran 99.4 3.3E-11 7.1E-16 119.8 19.6 94 78-172 27-122 (391)
65 PRK06690 acetyl-CoA acetyltran 99.4 1E-10 2.3E-15 114.7 20.9 90 78-172 25-114 (361)
66 PRK07103 polyketide beta-ketoa 99.4 3.8E-11 8.2E-16 120.4 18.2 191 1-203 1-251 (410)
67 TIGR03150 fabF beta-ketoacyl-a 99.3 1.1E-10 2.4E-15 117.0 20.8 186 2-203 1-243 (407)
68 PRK07850 acetyl-CoA acetyltran 99.3 1.8E-10 3.9E-15 114.4 21.5 94 78-172 26-121 (387)
69 PRK06158 thiolase; Provisional 99.3 2.4E-10 5.3E-15 113.5 21.0 88 78-170 28-116 (384)
70 PLN02644 acetyl-CoA C-acetyltr 99.3 3E-10 6.6E-15 113.2 20.9 93 78-171 25-118 (394)
71 PRK07108 acetyl-CoA acetyltran 99.3 1.4E-11 3.1E-16 122.4 10.3 95 78-173 27-123 (392)
72 PRK08256 lipid-transfer protei 99.3 1E-09 2.2E-14 109.5 23.4 89 78-171 22-111 (391)
73 PRK08439 3-oxoacyl-(acyl carri 99.3 5.3E-10 1.1E-14 112.0 21.0 186 1-203 1-244 (406)
74 PRK06205 acetyl-CoA acetyltran 99.3 1.9E-11 4.1E-16 122.2 9.7 95 78-173 26-121 (404)
75 PRK08235 acetyl-CoA acetyltran 99.3 2.3E-11 5E-16 121.0 10.0 95 78-173 26-121 (393)
76 PRK08242 acetyl-CoA acetyltran 99.2 5.3E-11 1.2E-15 118.3 11.4 95 78-173 28-124 (402)
77 PRK12578 acetyl-CoA acetyltran 99.2 6E-11 1.3E-15 118.1 10.6 93 78-172 21-114 (385)
78 PRK09052 acetyl-CoA acetyltran 99.2 7.3E-11 1.6E-15 117.6 10.7 95 78-173 31-128 (399)
79 PRK05952 3-oxoacyl-(acyl carri 99.2 2.3E-09 5.1E-14 106.2 21.3 296 1-377 1-380 (381)
80 PRK09185 3-oxoacyl-(acyl carri 99.2 7.7E-09 1.7E-13 103.2 25.1 206 114-378 137-390 (392)
81 PRK08722 3-oxoacyl-(acyl carri 99.2 4.4E-09 9.6E-14 105.5 23.3 186 2-203 4-246 (414)
82 PRK08170 acetyl-CoA acetyltran 99.2 8.8E-11 1.9E-15 118.2 10.6 94 78-172 27-121 (426)
83 PRK09116 3-oxoacyl-(acyl carri 99.2 5.8E-09 1.3E-13 104.4 23.3 187 1-203 1-245 (405)
84 PF00108 Thiolase_N: Thiolase, 99.2 1.3E-10 2.9E-15 109.5 10.5 96 78-174 26-122 (264)
85 PRK07801 acetyl-CoA acetyltran 99.2 1.5E-09 3.4E-14 107.8 18.5 93 78-171 26-120 (382)
86 PRK06059 lipid-transfer protei 99.2 1.2E-10 2.7E-15 116.3 10.5 93 78-172 23-117 (399)
87 PRK06333 3-oxoacyl-(acyl carri 99.2 1.6E-09 3.4E-14 109.3 17.9 187 2-203 4-256 (424)
88 cd00832 CLF Chain-length facto 99.1 6.7E-09 1.5E-13 103.8 21.3 185 2-203 1-241 (399)
89 PLN02836 3-oxoacyl-[acyl-carri 99.1 1.4E-08 3.1E-13 102.7 23.9 119 78-203 93-267 (437)
90 PRK06065 acetyl-CoA acetyltran 99.1 2.3E-10 5.1E-15 113.6 10.4 91 78-170 29-121 (392)
91 PRK06954 acetyl-CoA acetyltran 99.1 2.2E-10 4.8E-15 114.2 10.2 94 78-172 31-125 (397)
92 cd00826 nondecarbox_cond_enzym 99.1 3.5E-10 7.7E-15 112.6 11.0 94 78-173 23-118 (393)
93 PTZ00050 3-oxoacyl-acyl carrie 99.1 8.6E-09 1.9E-13 103.8 20.1 252 77-377 76-419 (421)
94 PLN02787 3-oxoacyl-[acyl-carri 99.1 1.7E-08 3.8E-13 103.8 22.4 185 2-203 129-373 (540)
95 PRK07967 3-oxoacyl-(acyl carri 99.1 8.3E-09 1.8E-13 103.2 19.4 186 1-203 1-244 (406)
96 PRK07910 3-oxoacyl-(acyl carri 99.1 5.9E-08 1.3E-12 97.5 24.0 315 2-377 12-416 (418)
97 PLN02287 3-ketoacyl-CoA thiola 99.0 1.1E-09 2.3E-14 110.7 11.1 95 77-172 70-166 (452)
98 PRK08257 acetyl-CoA acetyltran 99.0 4E-08 8.6E-13 100.6 21.9 92 78-171 27-120 (498)
99 PRK13359 beta-ketoadipyl CoA t 99.0 2.3E-09 4.9E-14 106.8 11.0 95 78-173 26-123 (400)
100 PRK08963 fadI 3-ketoacyl-CoA t 99.0 1.5E-09 3.3E-14 109.2 9.8 95 78-173 29-124 (428)
101 PRK07851 acetyl-CoA acetyltran 99.0 2.3E-09 5E-14 107.2 10.8 94 78-173 27-123 (406)
102 PRK08131 acetyl-CoA acetyltran 99.0 2.9E-09 6.3E-14 106.2 10.9 95 78-173 26-122 (401)
103 PRK06519 3-oxoacyl-(acyl carri 99.0 3.4E-07 7.4E-12 91.2 25.5 185 2-203 6-255 (398)
104 PRK14691 3-oxoacyl-(acyl carri 99.0 4.2E-08 9E-13 95.8 18.4 119 78-203 4-174 (342)
105 PRK06633 acetyl-CoA acetyltran 99.0 2.3E-09 4.9E-14 106.5 9.4 95 78-173 27-122 (392)
106 PRK06289 acetyl-CoA acetyltran 99.0 2.2E-09 4.8E-14 107.4 9.4 91 78-172 26-122 (403)
107 PRK07516 acetyl-CoA acetyltran 98.9 3.3E-09 7.3E-14 105.7 10.2 93 78-172 22-117 (389)
108 PRK06366 acetyl-CoA acetyltran 98.9 4.1E-09 8.8E-14 104.9 10.7 94 78-172 26-120 (388)
109 PF00109 ketoacyl-synt: Beta-k 98.9 1.1E-08 2.3E-13 95.9 12.6 189 1-201 1-251 (254)
110 PRK09050 beta-ketoadipyl CoA t 98.9 4.4E-09 9.5E-14 104.9 10.4 95 78-173 26-123 (401)
111 TIGR02446 FadI fatty oxidation 98.9 3.6E-09 7.9E-14 106.3 9.4 94 78-172 31-125 (430)
112 TIGR02430 pcaF beta-ketoadipyl 98.9 5.7E-09 1.2E-13 104.0 10.4 95 78-173 25-122 (400)
113 PTZ00455 3-ketoacyl-CoA thiola 98.9 8.7E-09 1.9E-13 103.8 11.2 95 78-173 48-153 (438)
114 PRK06157 acetyl-CoA acetyltran 98.9 1E-08 2.2E-13 102.4 11.2 93 78-172 27-120 (398)
115 PRK06504 acetyl-CoA acetyltran 98.9 1.3E-08 2.8E-13 101.2 11.3 95 78-173 26-122 (390)
116 PRK08947 fadA 3-ketoacyl-CoA t 98.8 1.4E-08 3E-13 101.0 10.3 95 78-173 27-124 (387)
117 PRK06365 acetyl-CoA acetyltran 98.8 2.8E-08 6E-13 100.1 10.8 93 78-172 37-131 (430)
118 PRK09268 acetyl-CoA acetyltran 98.8 4.2E-08 9.2E-13 98.6 10.8 95 78-173 31-126 (427)
119 TIGR02445 fadA fatty oxidation 98.8 2.3E-08 5.1E-13 99.2 8.6 95 78-173 25-122 (385)
120 PF07451 SpoVAD: Stage V sporu 98.7 7.7E-07 1.7E-11 83.0 15.7 119 77-204 50-175 (329)
121 TIGR02813 omega_3_PfaA polyket 98.6 5.3E-06 1.2E-10 98.5 24.5 213 116-379 185-462 (2582)
122 KOG1389 3-oxoacyl CoA thiolase 98.5 7.6E-07 1.6E-11 82.7 11.5 92 79-173 62-156 (435)
123 PRK08142 acetyl-CoA acetyltran 98.5 2.9E-07 6.2E-12 91.5 9.0 89 78-171 25-113 (388)
124 COG0304 FabB 3-oxoacyl-(acyl-c 98.5 1.2E-05 2.7E-10 79.9 19.2 187 1-204 2-245 (412)
125 PRK07855 lipid-transfer protei 98.4 1.3E-06 2.7E-11 87.0 9.7 85 78-167 24-108 (386)
126 PRK06066 acetyl-CoA acetyltran 98.3 5.4E-06 1.2E-10 82.2 10.5 89 78-171 25-116 (385)
127 COG0183 PaaJ Acetyl-CoA acetyl 98.2 8.7E-06 1.9E-10 81.1 9.7 96 78-174 27-126 (392)
128 KOG1406 Peroxisomal 3-ketoacyl 98.1 4.4E-06 9.6E-11 76.1 5.8 89 79-172 30-119 (408)
129 KOG1390 Acetyl-CoA acetyltrans 98.1 8.6E-06 1.9E-10 76.1 7.1 97 77-174 29-126 (396)
130 COG3321 Polyketide synthase mo 98.1 0.00075 1.6E-08 75.3 23.3 292 3-347 5-360 (1061)
131 PRK07937 lipid-transfer protei 98.0 3E-05 6.5E-10 76.1 10.2 88 79-171 25-114 (352)
132 KOG1394 3-oxoacyl-(acyl-carrie 97.8 0.00021 4.6E-09 68.0 11.2 121 76-203 92-269 (440)
133 KOG1391 Acetyl-CoA acetyltrans 97.5 0.00017 3.7E-09 65.7 6.0 94 77-173 27-124 (396)
134 PF08540 HMG_CoA_synt_C: Hydro 97.5 0.00024 5.3E-09 67.1 6.9 63 322-384 143-207 (282)
135 KOG1392 Acetyl-CoA acetyltrans 97.3 0.00023 5E-09 65.8 3.9 96 77-173 65-161 (465)
136 PF08541 ACP_syn_III_C: 3-Oxoa 96.2 0.0064 1.4E-07 47.2 4.1 72 90-168 1-78 (90)
137 PF13723 Ketoacyl-synt_2: Beta 95.4 0.31 6.6E-06 44.5 12.1 114 78-203 34-172 (218)
138 PRK06816 3-oxoacyl-(acyl carri 94.9 0.18 3.9E-06 50.2 10.0 87 76-169 268-365 (378)
139 TIGR00748 HMG_CoA_syn_Arc hydr 94.9 0.093 2E-06 51.5 7.9 83 78-166 206-293 (345)
140 PRK07204 3-oxoacyl-(acyl carri 94.5 0.16 3.4E-06 49.4 8.4 86 77-166 227-315 (329)
141 CHL00203 fabH 3-oxoacyl-acyl-c 94.3 0.16 3.5E-06 49.3 7.9 81 80-167 226-312 (326)
142 PRK05963 3-oxoacyl-(acyl carri 94.1 0.13 2.8E-06 49.9 6.7 84 77-167 224-313 (326)
143 PRK09258 3-oxoacyl-(acyl carri 94.1 0.24 5.3E-06 48.2 8.7 87 76-169 235-327 (338)
144 PRK12879 3-oxoacyl-(acyl carri 94.0 0.22 4.8E-06 48.1 8.2 82 79-167 224-311 (325)
145 PRK06025 acetyl-CoA acetyltran 93.7 0.25 5.4E-06 49.6 7.9 91 83-200 318-416 (417)
146 PLN02326 3-oxoacyl-[acyl-carri 93.6 0.34 7.4E-06 48.2 8.9 84 77-167 277-366 (379)
147 PRK06954 acetyl-CoA acetyltran 93.4 0.4 8.6E-06 48.0 8.9 87 286-377 308-395 (397)
148 PRK08242 acetyl-CoA acetyltran 93.3 0.48 1E-05 47.5 9.3 87 286-377 313-400 (402)
149 PRK08235 acetyl-CoA acetyltran 93.2 0.41 8.8E-06 47.9 8.6 88 286-378 304-392 (393)
150 cd00830 KAS_III Ketoacyl-acyl 93.2 0.31 6.7E-06 46.9 7.6 84 77-167 220-309 (320)
151 PRK06840 hypothetical protein; 93.1 0.34 7.4E-06 47.2 7.9 81 80-167 237-322 (339)
152 PRK07108 acetyl-CoA acetyltran 93.1 0.28 6.1E-06 49.0 7.3 88 286-378 303-391 (392)
153 PRK04262 hypothetical protein; 93.0 0.23 4.9E-06 48.8 6.4 81 80-166 209-294 (347)
154 TIGR00747 fabH 3-oxoacyl-(acyl 92.9 0.51 1.1E-05 45.5 8.7 83 78-167 217-305 (318)
155 PRK07851 acetyl-CoA acetyltran 92.8 0.33 7.2E-06 48.8 7.3 88 287-378 317-404 (406)
156 PRK09052 acetyl-CoA acetyltran 92.5 0.74 1.6E-05 46.1 9.3 87 286-377 310-397 (399)
157 PRK09352 3-oxoacyl-(acyl carri 92.5 0.5 1.1E-05 45.5 8.0 82 79-167 218-305 (319)
158 COG0332 FabH 3-oxoacyl-[acyl-c 92.3 0.27 5.7E-06 47.6 5.6 89 74-166 217-308 (323)
159 PRK13359 beta-ketoadipyl CoA t 91.8 0.78 1.7E-05 46.0 8.6 85 287-378 310-399 (400)
160 PRK06504 acetyl-CoA acetyltran 91.6 1.1 2.4E-05 44.7 9.4 85 286-377 301-388 (390)
161 TIGR02430 pcaF beta-ketoadipyl 91.2 0.78 1.7E-05 46.0 7.9 87 286-377 309-398 (400)
162 PRK06205 acetyl-CoA acetyltran 91.0 1.5 3.3E-05 44.0 9.8 88 286-378 311-402 (404)
163 COG3425 PksG 3-hydroxy-3-methy 90.7 1.6 3.4E-05 42.9 9.1 82 79-166 208-296 (377)
164 PRK06633 acetyl-CoA acetyltran 90.7 1.2 2.6E-05 44.5 8.6 88 286-378 303-391 (392)
165 PRK07515 3-oxoacyl-(acyl carri 90.6 0.62 1.3E-05 46.1 6.5 86 76-167 267-358 (372)
166 cd00825 decarbox_cond_enzymes 90.4 1.2 2.7E-05 42.9 8.3 78 80-157 205-286 (332)
167 PF02803 Thiolase_C: Thiolase, 90.2 0.89 1.9E-05 37.6 6.0 83 293-377 39-122 (123)
168 PRK08963 fadI 3-ketoacyl-CoA t 90.1 2.1 4.7E-05 43.3 10.0 89 286-378 322-427 (428)
169 PF02803 Thiolase_C: Thiolase, 90.0 1.2 2.7E-05 36.7 6.7 75 82-163 24-106 (123)
170 PRK06366 acetyl-CoA acetyltran 89.9 1.7 3.8E-05 43.3 9.0 89 286-379 298-387 (388)
171 PRK09050 beta-ketoadipyl CoA t 89.7 1.5 3.3E-05 43.9 8.4 51 83-137 300-350 (401)
172 PRK06147 3-oxoacyl-(acyl carri 89.3 0.74 1.6E-05 45.2 5.8 87 82-168 236-330 (348)
173 cd00831 CHS_like Chalcone and 88.8 1.1 2.4E-05 44.1 6.7 87 77-167 256-350 (361)
174 KOG1202 Animal-type fatty acid 87.9 5.1 0.00011 44.9 11.1 126 78-204 87-248 (2376)
175 PRK07850 acetyl-CoA acetyltran 87.8 3 6.5E-05 41.6 9.0 50 81-136 286-335 (387)
176 cd00327 cond_enzymes Condensin 87.6 2.6 5.7E-05 38.8 8.1 87 80-166 145-242 (254)
177 PRK06690 acetyl-CoA acetyltran 87.0 3.3 7.2E-05 40.9 8.7 76 81-163 259-342 (361)
178 PRK12880 3-oxoacyl-(acyl carri 86.5 2.4 5.1E-05 41.8 7.4 82 77-166 239-324 (353)
179 PRK08257 acetyl-CoA acetyltran 86.3 2.4 5.2E-05 43.8 7.6 80 83-166 295-382 (498)
180 cd00751 thiolase Thiolase are 85.7 3 6.4E-05 41.6 7.8 42 82-127 287-328 (386)
181 TIGR02445 fadA fatty oxidation 85.6 7 0.00015 39.0 10.3 87 287-378 294-384 (385)
182 PRK08947 fadA 3-ketoacyl-CoA t 85.2 5.7 0.00012 39.6 9.5 87 287-377 296-385 (387)
183 cd00827 init_cond_enzymes "ini 84.7 3 6.6E-05 40.0 7.2 88 75-169 218-315 (324)
184 PRK06445 acetyl-CoA acetyltran 84.0 5.1 0.00011 40.1 8.5 76 82-164 294-377 (394)
185 PRK05656 acetyl-CoA acetyltran 83.6 5 0.00011 40.1 8.3 41 83-127 294-334 (393)
186 COG1214 Inactive homolog of me 83.2 4.3 9.4E-05 37.1 7.1 79 79-166 38-117 (220)
187 PLN03169 chalcone synthase fam 83.0 4.9 0.00011 40.2 7.9 88 78-167 279-375 (391)
188 TIGR01835 HMG-CoA-S_prok 3-hyd 82.6 4.8 0.0001 40.0 7.7 30 78-107 203-232 (379)
189 PRK05790 putative acyltransfer 82.3 6.1 0.00013 39.4 8.3 42 82-127 293-334 (393)
190 cd00829 SCP-x_thiolase Thiolas 81.7 5.5 0.00012 39.3 7.8 44 81-128 252-295 (375)
191 PRK08131 acetyl-CoA acetyltran 81.4 6.5 0.00014 39.4 8.1 88 286-378 309-399 (401)
192 PRK12578 acetyl-CoA acetyltran 81.1 11 0.00024 37.4 9.7 61 286-350 270-348 (385)
193 PRK09051 beta-ketothiolase; Pr 80.9 5.6 0.00012 39.8 7.5 50 82-137 294-343 (394)
194 COG0533 QRI7 Metal-dependent p 80.1 6.3 0.00014 38.3 7.1 64 80-145 52-116 (342)
195 KOG2708 Predicted metalloprote 79.9 5.2 0.00011 36.5 6.1 63 80-144 51-114 (336)
196 TIGR02446 FadI fatty oxidation 79.1 10 0.00022 38.5 8.7 88 286-378 324-429 (430)
197 PRK07661 acetyl-CoA acetyltran 77.7 6.7 0.00015 39.2 6.9 71 81-157 290-368 (391)
198 PF02801 Ketoacyl-synt_C: Beta 77.3 1.4 3E-05 36.0 1.6 77 81-157 26-110 (119)
199 PRK06064 acetyl-CoA acetyltran 76.8 8.1 0.00018 38.5 7.2 42 82-127 260-301 (389)
200 COG0304 FabB 3-oxoacyl-(acyl-c 76.2 4.7 0.0001 40.5 5.3 75 81-156 277-356 (412)
201 PLN02287 3-ketoacyl-CoA thiola 76.0 6.6 0.00014 40.0 6.4 94 286-384 344-440 (452)
202 PRK09604 UGMP family protein; 75.7 9 0.00019 37.4 7.0 55 79-137 52-111 (332)
203 PRK06059 lipid-transfer protei 75.1 20 0.00043 35.9 9.5 42 83-128 276-317 (399)
204 PRK09268 acetyl-CoA acetyltran 74.4 19 0.00042 36.4 9.3 25 81-105 310-334 (427)
205 TIGR01930 AcCoA-C-Actrans acet 73.9 9 0.0002 38.1 6.7 41 83-127 289-329 (386)
206 PRK06158 thiolase; Provisional 73.5 12 0.00025 37.3 7.4 41 82-127 256-297 (384)
207 PRK08170 acetyl-CoA acetyltran 73.4 17 0.00037 36.8 8.6 19 185-203 262-280 (426)
208 PRK07516 acetyl-CoA acetyltran 72.6 8.2 0.00018 38.5 6.0 43 82-128 262-304 (389)
209 PRK06519 3-oxoacyl-(acyl carri 71.9 11 0.00024 37.8 6.7 44 82-126 282-326 (398)
210 PF07736 CM_1: Chorismate muta 71.6 16 0.00034 29.9 6.2 55 79-137 19-76 (118)
211 TIGR00329 gcp_kae1 metallohydr 70.9 13 0.00028 35.8 6.7 58 80-137 50-108 (305)
212 PLN02644 acetyl-CoA C-acetyltr 70.0 15 0.00033 36.6 7.3 41 83-127 294-334 (394)
213 PRK08256 lipid-transfer protei 69.8 14 0.0003 36.9 6.9 43 82-128 266-308 (391)
214 TIGR03723 bact_gcp putative gl 69.2 14 0.00031 35.6 6.7 59 79-137 50-109 (314)
215 PRK06065 acetyl-CoA acetyltran 68.9 72 0.0016 31.9 11.8 55 294-350 282-355 (392)
216 PRK07937 lipid-transfer protei 68.6 21 0.00046 35.1 7.8 77 84-166 250-334 (352)
217 PRK14691 3-oxoacyl-(acyl carri 67.7 12 0.00026 36.7 5.9 47 80-126 206-253 (342)
218 PRK07314 3-oxoacyl-(acyl carri 67.0 9.9 0.00021 38.0 5.3 45 82-126 278-323 (411)
219 PRK06289 acetyl-CoA acetyltran 66.9 24 0.00053 35.3 8.0 43 82-128 278-320 (403)
220 cd00834 KAS_I_II Beta-ketoacyl 65.9 11 0.00023 37.5 5.3 78 80-157 275-358 (406)
221 PRK14878 UGMP family protein; 64.7 14 0.00031 35.8 5.8 51 82-136 48-103 (323)
222 cd00828 elong_cond_enzymes "el 64.6 12 0.00027 37.2 5.5 46 80-125 274-320 (407)
223 TIGR03150 fabF beta-ketoacyl-a 64.3 11 0.00025 37.4 5.2 45 82-126 277-322 (407)
224 PLN02787 3-oxoacyl-[acyl-carri 63.9 16 0.00035 38.2 6.2 45 82-126 407-452 (540)
225 PLN03171 chalcone synthase-lik 63.6 25 0.00054 35.2 7.4 86 77-167 276-381 (399)
226 cd02185 AroH Chorismate mutase 63.5 23 0.00049 28.9 5.6 53 82-137 22-76 (117)
227 TIGR01796 CM_mono_aroH monofun 63.3 22 0.00047 29.0 5.5 52 83-138 23-77 (117)
228 PF00814 Peptidase_M22: Glycop 62.7 5.8 0.00013 37.4 2.5 58 80-137 31-89 (268)
229 cd00826 nondecarbox_cond_enzym 62.3 17 0.00036 36.4 5.9 42 82-127 271-312 (393)
230 cd00832 CLF Chain-length facto 61.9 19 0.0004 36.1 6.1 46 81-126 271-317 (399)
231 PTZ00455 3-ketoacyl-CoA thiola 61.7 23 0.0005 36.0 6.8 44 81-128 310-353 (438)
232 PLN03173 chalcone synthase; Pr 61.2 23 0.0005 35.4 6.6 49 78-130 275-323 (391)
233 PRK05952 3-oxoacyl-(acyl carri 61.1 14 0.00031 36.7 5.1 46 80-125 254-300 (381)
234 TIGR03725 bact_YeaZ universal 60.7 12 0.00026 33.6 4.1 59 79-137 34-93 (202)
235 PRK07855 lipid-transfer protei 60.4 43 0.00092 33.4 8.4 41 83-127 269-309 (386)
236 PRK06066 acetyl-CoA acetyltran 60.3 62 0.0013 32.3 9.4 42 83-128 259-302 (385)
237 PLN03170 chalcone synthase; Pr 59.6 30 0.00065 34.7 7.1 71 77-151 278-354 (401)
238 PRK07801 acetyl-CoA acetyltran 59.5 18 0.00039 35.9 5.5 49 83-137 283-331 (382)
239 PRK09585 anmK anhydro-N-acetyl 59.0 28 0.00061 34.4 6.6 53 75-127 66-126 (365)
240 KOG1390 Acetyl-CoA acetyltrans 58.7 12 0.00025 36.0 3.7 82 286-377 307-394 (396)
241 PRK09185 3-oxoacyl-(acyl carri 58.5 20 0.00043 35.7 5.7 73 83-157 263-340 (392)
242 TIGR03722 arch_KAE1 universal 58.1 18 0.00039 35.1 5.1 51 83-137 50-105 (322)
243 PTZ00050 3-oxoacyl-acyl carrie 57.1 31 0.00068 34.7 6.9 47 80-126 283-331 (421)
244 PRK13410 molecular chaperone D 56.2 38 0.00081 36.5 7.6 67 78-149 307-374 (668)
245 PF12633 Adenyl_cycl_N: Adenyl 55.8 10 0.00023 34.1 2.8 58 292-352 113-193 (204)
246 PRK07910 3-oxoacyl-(acyl carri 55.5 31 0.00067 34.8 6.5 46 81-126 287-333 (418)
247 PF00195 Chal_sti_synt_N: Chal 54.3 15 0.00033 33.7 3.6 81 278-367 105-191 (226)
248 PRK06333 3-oxoacyl-(acyl carri 54.2 22 0.00049 35.7 5.3 45 81-125 289-334 (424)
249 KOG2707 Predicted metalloprote 53.8 22 0.00048 34.6 4.7 53 81-137 85-142 (405)
250 PRK06501 3-oxoacyl-(acyl carri 53.5 20 0.00043 36.2 4.7 44 82-125 291-335 (425)
251 PF01135 PCMT: Protein-L-isoas 52.7 12 0.00027 33.8 2.8 38 337-374 53-90 (209)
252 PRK09605 bifunctional UGMP fam 52.6 28 0.0006 36.3 5.8 54 78-137 49-108 (535)
253 PRK09116 3-oxoacyl-(acyl carri 52.3 30 0.00064 34.7 5.7 45 81-125 276-321 (405)
254 PLN03172 chalcone synthase fam 51.8 48 0.001 33.1 7.1 69 78-150 275-349 (393)
255 smart00825 PKS_KS Beta-ketoacy 51.6 39 0.00084 33.8 6.5 47 80-126 279-326 (424)
256 PRK08722 3-oxoacyl-(acyl carri 51.5 39 0.00084 34.0 6.5 45 81-125 279-324 (414)
257 PLN02854 3-ketoacyl-CoA syntha 50.7 69 0.0015 33.3 8.1 42 82-127 387-434 (521)
258 TIGR03285 methan_mark_14 putat 48.9 39 0.00085 33.1 5.5 42 74-115 61-104 (445)
259 TIGR01991 HscA Fe-S protein as 48.0 1E+02 0.0023 32.6 9.3 48 78-127 291-339 (599)
260 PRK05183 hscA chaperone protei 47.0 1E+02 0.0022 32.8 9.0 65 79-148 308-373 (616)
261 PLN03184 chloroplast Hsp70; Pr 46.9 63 0.0014 34.8 7.5 65 79-148 345-410 (673)
262 KOG1394 3-oxoacyl-(acyl-carrie 46.3 24 0.00053 34.5 3.7 48 80-127 301-349 (440)
263 PTZ00186 heat shock 70 kDa pre 46.2 80 0.0017 33.9 8.1 64 80-148 334-398 (657)
264 PRK08142 acetyl-CoA acetyltran 45.8 30 0.00065 34.5 4.6 43 81-127 256-298 (388)
265 PLN02836 3-oxoacyl-[acyl-carri 45.6 43 0.00094 33.9 5.8 26 81-106 300-325 (437)
266 cd00833 PKS polyketide synthas 45.3 47 0.001 33.1 6.0 27 80-106 279-305 (421)
267 CHL00094 dnaK heat shock prote 44.8 69 0.0015 34.1 7.4 48 79-127 308-355 (621)
268 PRK00290 dnaK molecular chaper 43.2 82 0.0018 33.6 7.6 67 78-148 305-371 (627)
269 PTZ00340 O-sialoglycoprotein e 43.0 41 0.00089 33.0 4.9 56 81-137 52-109 (345)
270 PF12244 DUF3606: Protein of u 42.1 22 0.00047 25.0 2.1 29 307-338 21-49 (57)
271 PRK07103 polyketide beta-ketoa 41.8 52 0.0011 33.0 5.6 24 83-106 284-307 (410)
272 KOG1794 N-Acetylglucosamine ki 41.3 1.4E+02 0.003 28.7 7.7 113 78-202 45-165 (336)
273 PRK13411 molecular chaperone D 41.1 79 0.0017 33.9 7.2 46 79-126 307-353 (653)
274 PRK06365 acetyl-CoA acetyltran 40.3 90 0.002 31.6 7.1 43 82-128 295-339 (430)
275 TIGR02350 prok_dnaK chaperone 39.6 86 0.0019 33.2 7.1 67 78-148 303-369 (595)
276 PF02801 Ketoacyl-synt_C: Beta 39.1 40 0.00086 27.2 3.6 55 293-348 42-103 (119)
277 KOG1406 Peroxisomal 3-ketoacyl 37.9 33 0.00072 32.1 3.1 29 78-106 270-298 (408)
278 PTZ00009 heat shock 70 kDa pro 37.8 1E+02 0.0022 33.0 7.4 64 82-149 315-379 (653)
279 PRK00768 nadE NAD synthetase; 37.8 3.6E+02 0.0077 25.5 11.7 32 114-147 89-120 (268)
280 PLN03168 chalcone synthase; Pr 36.7 97 0.0021 30.9 6.6 79 277-364 105-189 (389)
281 PF09887 DUF2114: Uncharacteri 35.9 91 0.002 30.7 5.8 42 74-115 63-107 (448)
282 PTZ00400 DnaK-type molecular c 35.2 83 0.0018 33.9 6.2 45 81-127 349-394 (663)
283 COG2518 Pcm Protein-L-isoaspar 34.0 32 0.00069 31.1 2.4 36 339-374 55-90 (209)
284 PRK08313 acetyl-CoA acetyltran 33.3 69 0.0015 31.9 4.9 45 80-128 255-301 (386)
285 PRK06157 acetyl-CoA acetyltran 32.7 80 0.0017 31.5 5.3 43 82-128 268-312 (398)
286 COG3072 CyaA Adenylate cyclase 30.5 39 0.00084 35.5 2.5 56 293-351 115-193 (853)
287 PF09663 Amido_AtzD_TrzD: Amid 30.0 1.7E+02 0.0037 28.6 6.5 69 78-153 130-202 (365)
288 PF03702 UPF0075: Uncharacteri 29.8 78 0.0017 31.3 4.5 51 77-127 65-125 (364)
289 PF08392 FAE1_CUT1_RppA: FAE1/ 27.4 1.3E+02 0.0029 28.6 5.4 70 287-365 99-172 (290)
290 PF06924 DUF1281: Protein of u 27.2 22 0.00047 29.5 0.1 39 21-59 72-110 (134)
291 COG3424 BcsA Predicted naringe 26.8 2E+02 0.0044 27.8 6.4 80 275-363 78-163 (356)
292 PLN02666 5-oxoprolinase 25.4 1.4E+02 0.0029 34.9 6.0 45 79-127 468-512 (1275)
293 COG4065 Uncharacterized protei 25.3 1.8E+02 0.0039 28.1 5.8 45 75-119 94-141 (480)
294 COG2377 Predicted molecular ch 24.9 1.5E+02 0.0032 29.3 5.3 64 73-136 66-141 (371)
295 COG4401 AroH Chorismate mutase 23.8 2.5E+02 0.0055 22.6 5.4 59 79-141 21-81 (125)
296 PF11394 DUF2875: Protein of u 23.6 2.1E+02 0.0045 28.8 6.0 72 318-393 374-445 (451)
297 PF11392 DUF2877: Protein of u 23.5 1.6E+02 0.0034 23.6 4.5 45 305-349 65-109 (110)
298 PF11165 DUF2949: Protein of u 23.4 90 0.0019 22.1 2.6 39 305-347 2-40 (58)
299 PRK08304 stage V sporulation p 23.3 3.3E+02 0.0072 26.6 7.3 89 79-169 204-311 (337)
300 PLN02932 3-ketoacyl-CoA syntha 23.0 2.2E+02 0.0048 29.3 6.5 66 287-364 164-236 (478)
301 PLN00415 3-ketoacyl-CoA syntha 22.8 2E+02 0.0044 29.5 6.1 69 287-364 150-222 (466)
302 PLN02377 3-ketoacyl-CoA syntha 21.9 3.5E+02 0.0076 28.1 7.7 39 85-127 379-418 (502)
303 PRK08329 threonine synthase; V 21.7 1E+02 0.0022 30.1 3.7 62 308-369 276-344 (347)
304 COG3473 Maleate cis-trans isom 21.2 5.3E+02 0.011 23.5 7.6 76 77-166 48-125 (238)
305 cd04493 BRCA2DBD_OB1 BRCA2DBD_ 21.1 1.3E+02 0.0028 23.9 3.3 22 344-365 41-62 (100)
306 TIGR02609 doc_partner putative 21.0 49 0.0011 24.5 1.0 35 330-367 3-37 (74)
307 TIGR02813 omega_3_PfaA polyket 20.9 1.6E+02 0.0034 37.1 5.6 75 83-157 318-401 (2582)
308 PRK01433 hscA chaperone protei 20.7 4.4E+02 0.0095 28.0 8.4 65 77-148 288-353 (595)
309 TIGR02714 amido_AtzD_TrzD ring 20.5 3.3E+02 0.0071 26.6 6.5 27 77-103 130-157 (366)
No 1
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.3e-71 Score=553.88 Aligned_cols=400 Identities=55% Similarity=0.921 Sum_probs=357.9
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhc---CCCChhh---HHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTS---NVFDKES---LDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSR 75 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~---~~~~~~~---~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~ 75 (401)
++||++..++|.|++.++|+.+.+.+++... +.+++++ ++|++||++++||.+|+++++.....+++++++.++
T Consensus 66 ~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~ 145 (478)
T PLN02932 66 KPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSR 145 (478)
T ss_pred CcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHH
Confidence 4799999999999999999999999988654 5677766 999999999999999999988766667777889999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 76 EETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
+++.+|+.+|+++||+++|++|+|||+||++|+++...|+++.+|+++||+++++.+||++++||+|++.||++|+++++
T Consensus 146 ~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~ 225 (478)
T PLN02932 146 KETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQ 225 (478)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998766689999999999999987899999998899999999999999999
Q ss_pred cCCCCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCcccccccccccc
Q 044359 156 VHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQD 235 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
+++.++||||++|.+|..++++++++.++++++|||||+|+||++.+.....++|++++.++++..+|+..+++++++.+
T Consensus 226 ~~~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d 305 (478)
T PLN02932 226 VHRNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEED 305 (478)
T ss_pred cCCCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecc
Confidence 99999999999999999998876777778999999999999999866332235788888888899999999998888776
Q ss_pred CCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc-----cCCCcchhhhcceEeecCCChHHHH
Q 044359 236 KDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS-----KTYVPNFKKAFEHFCIHAGGRAIID 310 (401)
Q Consensus 236 ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~l~~~~~~did~~i~Hq~~~~~~~ 310 (401)
+.|..++.+++++|..+++.++.++..+++.+++..+.+.+.+..+.+.+ .++.++...+||+|++||+|+++++
T Consensus 306 ~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IId 385 (478)
T PLN02932 306 EDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALID 385 (478)
T ss_pred cCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHH
Confidence 66766889999999999999999998888888877777766655444332 3444444578999999999999999
Q ss_pred HHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccCCcCCCCCc
Q 044359 311 AVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDPKERNAW 390 (401)
Q Consensus 311 ~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~~~~~~~ 390 (401)
.+++.||++++++..|+.++++||||+|+|+|+.|+++.++|++++||+|++++||+|++|++++||...++++++.|.|
T Consensus 386 av~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~~~~w 465 (478)
T PLN02932 386 EMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSANNPW 465 (478)
T ss_pred HHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcCCCCc
Confidence 99999999998888889999999999999999999999999999999999999999999999999999999999888999
Q ss_pred ccccccCCCCC
Q 044359 391 SDRIHLYPVDI 401 (401)
Q Consensus 391 ~~~~~~~~~~~ 401 (401)
+||||.|||++
T Consensus 466 ~~~i~~yp~~~ 476 (478)
T PLN02932 466 EDCLHKYPVEI 476 (478)
T ss_pred hhhHhhCCCCC
Confidence 99999999975
No 2
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.3e-69 Score=540.37 Aligned_cols=400 Identities=51% Similarity=0.901 Sum_probs=359.9
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
++||++..++|.|++.++|+.+.+.+++...+.+++++++|+.|+++++|+.+..+.++.....+++.+++.+++++...
T Consensus 112 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~~~~~~~~~~r~ea~~v 191 (521)
T PLN02854 112 KPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSRPPNLCMEEARAEAEAV 191 (521)
T ss_pred CcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCCCCcchHHHHHHHHHHH
Confidence 47999999999999999999999999999888899999999999999999999999999888888999999999999999
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
...|++++|+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|++++++++.++
T Consensus 192 ~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~ 271 (521)
T PLN02854 192 MFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSY 271 (521)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCe
Confidence 99999999999999999999999877788889999999999999988899999998899999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCee
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVG 241 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (401)
||||++|.+|..++.++|++.++++++|||||+|+||++.+...++++|++.+++++++.+|+..+++++.+.++.|..+
T Consensus 272 aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~~~~i~~~~d~~G~~g 351 (521)
T PLN02854 272 AVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVYQREDDKGTIG 351 (521)
T ss_pred EEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCccCeEEeccCCCCccc
Confidence 99999999996666667888788899999999999999865332335688888889999999998988888766556556
Q ss_pred eEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCC---cchhhhcceEeecCCChHHHHHHHHHc
Q 044359 242 VSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYV---PNFKKAFEHFCIHAGGRAIIDAVEENL 316 (401)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~---~~~~~did~~i~Hq~~~~~~~~~~~~l 316 (401)
+.++++.|...++.++.++..+++.+++..+.+.+....+.+.+ .++. ++...|||||++||+|+++++.+++.|
T Consensus 352 ~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~IId~v~k~L 431 (521)
T PLN02854 352 VSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNL 431 (521)
T ss_pred ccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCHHHHHHHHHHc
Confidence 67788888777777888888999999999888887777777776 3554 233479999999999999999999999
Q ss_pred CCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccCCcC--CCCCccccc
Q 044359 317 KLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDPK--ERNAWSDRI 394 (401)
Q Consensus 317 gi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~~--~~~~~~~~~ 394 (401)
|+++++...|+.++++||||+|+|+|+.|+++.++|++++||+|++++||+|++|++++|||..++++. +.|.|+|||
T Consensus 432 gL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~~~~~~~~~~~~~w~~~i 511 (521)
T PLN02854 432 QLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALREIPTGESTGNPWADSI 511 (521)
T ss_pred CCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEeccCCccccCCCCchhhH
Confidence 999776666689999999999999999999999999999999999999999999999999999998875 679999999
Q ss_pred ccCCCCC
Q 044359 395 HLYPVDI 401 (401)
Q Consensus 395 ~~~~~~~ 401 (401)
|.|||++
T Consensus 512 ~~yp~~~ 518 (521)
T PLN02854 512 DRYPVKV 518 (521)
T ss_pred hhCCCCC
Confidence 9999975
No 3
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=5.5e-69 Score=537.97 Aligned_cols=400 Identities=54% Similarity=0.954 Sum_probs=352.0
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
++||++..++|.|++.++|+.+.+.++....+.++++++++++|+++++||.+..+.++.....+++.+++.+++++.++
T Consensus 96 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~~~~~~~~ea~~l 175 (502)
T PLN02377 96 RPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPSMAAAREEAEQV 175 (502)
T ss_pred CCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccchHHHHHHHHHHH
Confidence 47999999999999999999999999999888899999999999999999988778887777778888999999999999
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
+..|+++||+++|++|+|||+||+.|++++..|+++.+|+++||+++++.+||++++||+|++.||++|++++++++.++
T Consensus 176 ~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~ 255 (502)
T PLN02377 176 MFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTY 255 (502)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999866777889999999999999988899999998899999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCee
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVG 241 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (401)
||||++|.+|..+++++++..++++++|||||+|+||++.+....+.+|++.++++++..++++.+++++.++++.|..+
T Consensus 256 aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~~d~~G~~g 335 (502)
T PLN02377 256 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQEQDDAGKTG 335 (502)
T ss_pred EEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeeeccccCCCCC
Confidence 99999999999988866666677789999999999999854332234566666778888888888888877765556567
Q ss_pred eEeccCchHHHHHHHHHHHHhhCCCCCchhHH-HHHHHHHHhhhcc----CCCcchhhhcceEeecCCChHHHHHHHHHc
Q 044359 242 VSISRSLLPVAARALRINISQLGPHVLPYSEQ-LKYLWSVVCKKSK----TYVPNFKKAFEHFCIHAGGRAIIDAVEENL 316 (401)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~----~l~~~~~~did~~i~Hq~~~~~~~~~~~~l 316 (401)
+.+++++|.+.++.++.++..+++.+++..+. +.++...+++.+. ...++..+|||+|++||+|+++++.+++.|
T Consensus 336 ~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqggr~IId~v~k~L 415 (502)
T PLN02377 336 VSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAGGRAVIDELEKNL 415 (502)
T ss_pred CCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCCCHHHHHHHHHHc
Confidence 78889999888888888999888888775433 3344455555442 221244689999999999999999999999
Q ss_pred CCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccCCcCCCCCccccccc
Q 044359 317 KLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDPKERNAWSDRIHL 396 (401)
Q Consensus 317 gi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~~~~~~~~~~~~~ 396 (401)
|++++++..|+.++++||||+|+|+|+.|+++.++|++++||+|++++||+|++|++++|||..++++++.|.|+||||.
T Consensus 416 gL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~~~~~~w~~~i~~ 495 (502)
T PLN02377 416 QLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKPSNNSPWEDCIDK 495 (502)
T ss_pred CCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCCCCCCCchhhHhh
Confidence 99987777779999999999999999999999999999999999999999999999999999999999888999999999
Q ss_pred CCCCC
Q 044359 397 YPVDI 401 (401)
Q Consensus 397 ~~~~~ 401 (401)
|||++
T Consensus 496 yp~~~ 500 (502)
T PLN02377 496 YPVKL 500 (502)
T ss_pred CCCcc
Confidence 99975
No 4
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.1e-68 Score=534.36 Aligned_cols=393 Identities=54% Similarity=0.938 Sum_probs=349.1
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
++||++..++|.|++.++|+.+.+.++....+.+++++++|+.|+++++|+.+..+.++.....+++.+++..++++..+
T Consensus 100 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~~~~~~Ea~~~ 179 (511)
T PLN02192 100 RPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEARKEAETV 179 (511)
T ss_pred CcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccHHHHHHHHHHH
Confidence 36999999999999999999999999999888899999999999999999999999999888888999999999999999
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
...|+++||+++|++|+|||.||++|++++..|+++.+|+++||++.++.+||++++||+|++.||++|++++++++.++
T Consensus 180 ~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~ 259 (511)
T PLN02192 180 MFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSY 259 (511)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCe
Confidence 99999999999999999999999988888899999999999999987899999998899999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCee
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVG 241 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (401)
||||++|.+|..++.++|++.++++++|||||+|+||++.+.....++|++.+.++++.++++..+++++.+++..|..+
T Consensus 260 aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~~ed~~g~~g 339 (511)
T PLN02192 260 ALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQEEDSAGKIG 339 (511)
T ss_pred EEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceeccccccccee
Confidence 99999999997766668888777889999999999999864332235678877778889999988888888877778889
Q ss_pred eEeccCchHHHHHHHHHHHHhhCCCCCc------------hhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHH
Q 044359 242 VSISRSLLPVAARALRINISQLGPHVLP------------YSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAII 309 (401)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~ 309 (401)
+.+++++|...+..++.+++.+++.+.+ +.+.|+++++. +.++...+||+|++||+|++++
T Consensus 340 ~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~-------~~p~~~~~Idhf~iHqggr~II 412 (511)
T PLN02192 340 VSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKP-------YIPDFKLAFEHFCIHAGGRAVL 412 (511)
T ss_pred eEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhh-------ccHHHHHhhceEeeccCCHHHH
Confidence 9999999999888777666666554332 33444433321 2223357899999999999999
Q ss_pred HHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccCCcCC-CC
Q 044359 310 DAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDPKE-RN 388 (401)
Q Consensus 310 ~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~~~-~~ 388 (401)
+.+++.||++++++..|+.++++||||+|+|+|++|+++.++|++++||+|++++||+|++|++++|||..++++++ .|
T Consensus 413 d~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~~~~~ 492 (511)
T PLN02192 413 DELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKEKN 492 (511)
T ss_pred HHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCcccCC
Confidence 99999999998777777899999999999999999999999999999999999999999999999999999988864 49
Q ss_pred CcccccccCCCCC
Q 044359 389 AWSDRIHLYPVDI 401 (401)
Q Consensus 389 ~~~~~~~~~~~~~ 401 (401)
.|+||||.|||++
T Consensus 493 ~w~~~i~~yp~~~ 505 (511)
T PLN02192 493 PWMDEIHEFPVDV 505 (511)
T ss_pred CchhhHHhCCCCC
Confidence 9999999999975
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.7e-65 Score=503.80 Aligned_cols=400 Identities=47% Similarity=0.861 Sum_probs=349.0
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
++||++..++|.|+..++|+.+.+.++....+.+++++++|+.++.+++||-+.-+.++.....++..+++..++++..-
T Consensus 58 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~~~~~~~~~~~~~~e~em~ 137 (466)
T PLN00415 58 KPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESELV 137 (466)
T ss_pred CcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCccccCCCCCChhhhHHHHHHH
Confidence 47999999999999999999999999998888899999999999999999999878877666667777776666666666
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
...|+++||+++|++|+|||+||++|++.+..|+++.+++++||+++++.++|++++||+|++.||++|.+++++++.++
T Consensus 138 i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~ 217 (466)
T PLN00415 138 IFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTY 217 (466)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCE
Confidence 66689999999999999999999766666689999999999999998999999998899999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCee
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVG 241 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (401)
||||++|.+|..++.++|+++++++++|||||+|+||++++.....+.|++..+++++...+...+.+.++..++.|..+
T Consensus 218 aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~~~d~~~~~~~~~~d~~G~~g 297 (466)
T PLN00415 218 AVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKEDSKGIVG 297 (466)
T ss_pred EEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCCCChhhhcceeeeecCCCcce
Confidence 99999999998774457888888889999999999999875443346788877788877655556666666677777778
Q ss_pred eEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc-----cCCCcchhhhcceEeecCCChHHHHHHHHHc
Q 044359 242 VSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS-----KTYVPNFKKAFEHFCIHAGGRAIIDAVEENL 316 (401)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~l~~~~~~did~~i~Hq~~~~~~~~~~~~l 316 (401)
+.+++++|.+++++++.+++.+++...+..+.+++....+.+.+ ..+.|+...-+++|++|++|+++++.+++.|
T Consensus 298 v~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~~~~hf~iHpGGraVLdave~~L 377 (466)
T PLN00415 298 VALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCFKHFCIHAGGRALLDAVEKGL 377 (466)
T ss_pred EEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccccceeEEecCCcHHHHHHHHHHc
Confidence 99999999999999999999998888888887777666555543 1122222223889999999999999999999
Q ss_pred CCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccCCcCCC---CCcccc
Q 044359 317 KLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDPKER---NAWSDR 393 (401)
Q Consensus 317 gi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~~~~---~~~~~~ 393 (401)
|++++++.+|+.++++||||+|+|+++.|+++.++++.++||++++++||+|+++++++||+..++++++. |.|+||
T Consensus 378 gL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~es~v~~~~~~~~~~~~~~~~~w~~~ 457 (466)
T PLN00415 378 GLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCNSIVWRALRTIPANESLVGNPWGDS 457 (466)
T ss_pred CCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchhhHhHHHHhccCCcccccCCCCchhh
Confidence 99999999999999999999999999999999988999999999999999999999999999999988654 999999
Q ss_pred cccCCCCC
Q 044359 394 IHLYPVDI 401 (401)
Q Consensus 394 ~~~~~~~~ 401 (401)
||.|||++
T Consensus 458 i~~yp~~~ 465 (466)
T PLN00415 458 VHKYPVHV 465 (466)
T ss_pred HHhCCCCC
Confidence 99999975
No 6
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=1.3e-62 Score=466.17 Aligned_cols=316 Identities=20% Similarity=0.301 Sum_probs=273.0
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEE 80 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~ 80 (401)
+.+++|.|+|+|+|+++ |+|+++.+.+.. ++ +||..++||++||++.+++ ...+
T Consensus 1 ~~~a~i~g~G~~lP~~~--vtn~d~e~~~~t----sd------ewI~~rtGir~R~~a~~~e--------------~~s~ 54 (323)
T COG0332 1 MMNAKILGIGSYLPERV--VTNADLEKRVDT----SD------EWIETRTGIRERRIAADDE--------------TTSD 54 (323)
T ss_pred CCcceEEEEEeecCCcc--cChHHHHhccCC----Cc------ceeeeecCCceeeecCCCc--------------cHHH
Confidence 46789999999999998 999999965432 22 6999999999999998743 2579
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKN 159 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~ 159 (401)
|+++|+++||+++|++|+|||+||++| +|++.+|++|+.||++||+. ++.+||++ .+|+|++.||++|..+|++|.+
T Consensus 55 la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~ 132 (323)
T COG0332 55 LAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGY 132 (323)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999998 68899999999999999999 59999999 6999999999999999999999
Q ss_pred CeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCC
Q 044359 160 SLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGN 239 (401)
Q Consensus 160 ~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 239 (401)
++||||++|++|+.+++ +||. ++.+|||||+|+||++.+... +++.+.+.+|+..++.++.+......
T Consensus 133 k~vLVVg~e~~S~~ld~-~dR~---t~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~~ 200 (323)
T COG0332 133 KNVLVVGAETLSRILDW-TDRD---TCVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSAT 200 (323)
T ss_pred CEEEEEehhHhhccCCH-hhcc---ceEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCcc
Confidence 99999999999999987 7887 789999999999999987322 45577888898877655543221100
Q ss_pred eeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc------cCCCcchhhhcceEeecCCChHHHHHHH
Q 044359 240 VGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS------KTYVPNFKKAFEHFCIHAGGRAIIDAVE 313 (401)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~l~~~~~~did~~i~Hq~~~~~~~~~~ 313 (401)
.+.. . ....+.|++.++|+++++.|++++ +++. ++|||||++||+|.++++.+.
T Consensus 201 -----~~~~------~------~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~---~~dId~~vpHQan~ri~~~i~ 260 (323)
T COG0332 201 -----PKEE------S------GGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLT---PEDIDWFVPHQANLRIIEAIA 260 (323)
T ss_pred -----cccc------c------cccceeeccHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEccccccHHHHHHHH
Confidence 0000 0 012345677889999998888877 4565 899999999999999999999
Q ss_pred HHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeee
Q 044359 314 ENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCV 379 (401)
Q Consensus 314 ~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~ 379 (401)
++|++|++|+ ..++++|||+++||+|++|++++++|++++||+++|.+||+|++|+++++||+
T Consensus 261 ~~l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 261 KKLGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred HHcCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 9999999999 68999999999999999999999999999999999999999999999999985
No 7
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=2.1e-54 Score=426.79 Aligned_cols=347 Identities=19% Similarity=0.237 Sum_probs=270.4
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCC-ChhhHH-HHHHHHHHcCCCCceecCCC--ccCCC-------C--CC
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVF-DKESLD-FQEKVLEKSGIGDESCIPLN--LHEMQ-------P--DV 69 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~-~~~~~~-~~~~i~~~~GI~~R~~~~~~--~~~~~-------~--~~ 69 (401)
+++|.|+|++.|++. ++|+|+.+++.+.... +.++++ ++.+|++++||++||++.++ +.+.+ | +.
T Consensus 16 ~~~I~~igta~P~~~--~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~ 93 (393)
T PLN03172 16 PATILAIGKATPANC--VSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDA 93 (393)
T ss_pred CeEEEEEEecCCCcc--ccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHH
Confidence 478999999999997 9999999998754321 223333 37789999999999986531 11111 1 12
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcce-EEeecccchhHHHHHH
Q 044359 70 SLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKS-INLSGMGCSAGILSIS 148 (401)
Q Consensus 70 ~l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~-~~i~~~gC~~~~~aL~ 148 (401)
.++.|.+.+.+|+.+|+++||+++|++++|||+||++|+++...|+++.+|+++||+++.+.+ ++++ +||+|++.||+
T Consensus 94 r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL~ 172 (393)
T PLN03172 94 RQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFAGGTVLR 172 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHHHHHHHH
Confidence 346788999999999999999999999999999999987665699999999999999866655 5666 79999999999
Q ss_pred HHHHHHHcCCCCeEEEEeeccccCCC-CCC-CCcchhhhhhcccccceEEEEecCCCCc-cccceEEeeeeeec-ccCCc
Q 044359 149 LVKDLLKVHKNSLALVLSMEAISSNG-YTG-STKSMLISNTVFRMGGAAILLSNRQQDK-HIAKYKLKHLVRTH-MGYDD 224 (401)
Q Consensus 149 ~A~~~i~~g~~~~vLvv~~e~~s~~~-~~~-~d~~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~~l~~~~~~~-~~~~~ 224 (401)
+|.+++++++.++||||++|.+|..+ ++. .+.+++++..+|||||+|+||++++... ..+.|++++..++. ..+++
T Consensus 173 ~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~~ 252 (393)
T PLN03172 173 LAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSDG 252 (393)
T ss_pred HHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCcc
Confidence 99999999999999999999999654 331 2245667899999999999999865421 22446766543222 22333
Q ss_pred cccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCC
Q 044359 225 QAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAG 304 (401)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~ 304 (401)
.....+ . ..| ..+.+.+++|..+.+.+...++.+ ++. .++. ..||++|++||+
T Consensus 253 ~~~~~i-~---~~G-~~~~l~~~vp~~~~~~i~~~~~~~-------L~~------------~gl~---~~di~~~~~Hqg 305 (393)
T PLN03172 253 AIDGHL-R---EVG-LTFHLLKDVPGLISKNIEKSLVEA-------FAP------------IGIN---DWNSIFWIAHPG 305 (393)
T ss_pred cccceE-E---cCC-cEEEEechHHHHHHHHHHHHHHHH-------hhh------------cCCC---ccccceEEecCC
Confidence 221111 1 112 356677888888777766555433 111 2443 589999999999
Q ss_pred ChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHH----HcCCCCCC---CeEEEEeeccchhhcceeee
Q 044359 305 GRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLE----AKGKVKKG---DRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 305 ~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~----~~g~l~~G---d~vll~~~G~G~s~~~~~l~ 377 (401)
|+++++.+++.||++++++..|+.++++||||+|||+|++|++++ ++|++++| |++++++||+|++|+++++|
T Consensus 306 g~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~ 385 (393)
T PLN03172 306 GPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLH 385 (393)
T ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceeeeeeeE
Confidence 999999999999999999998889999999999999999999987 35777777 88999999999999999999
Q ss_pred ee
Q 044359 378 CV 379 (401)
Q Consensus 378 ~~ 379 (401)
|.
T Consensus 386 ~~ 387 (393)
T PLN03172 386 SV 387 (393)
T ss_pred ec
Confidence 94
No 8
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=9e-54 Score=422.49 Aligned_cols=349 Identities=17% Similarity=0.243 Sum_probs=264.7
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCC--ChhhHHHHHHHHHHcCCCCceecCCC--ccCCCC---------CC
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVF--DKESLDFQEKVLEKSGIGDESCIPLN--LHEMQP---------DV 69 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~--~~~~~~~~~~i~~~~GI~~R~~~~~~--~~~~~~---------~~ 69 (401)
+++|.++|+..|++. ++|+|+.+++.+.... .+...+++++|++++||++||++.++ +.+.+. +.
T Consensus 15 ~~~i~~i~ta~P~~~--~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~ 92 (389)
T PLN03168 15 PACVLGIGTAVPPAE--FLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNV 92 (389)
T ss_pred CeEEEEEeccCCCcc--cCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHH
Confidence 578999999999997 9999999998765321 12233457889999999999986532 111111 12
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCc-ceEEeecccchhHHHHHH
Q 044359 70 SLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNI-KSINLSGMGCSAGILSIS 148 (401)
Q Consensus 70 ~l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~-~~~~i~~~gC~~~~~aL~ 148 (401)
.++.|.+.+.+|+.+|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+ .++|++ +||+||+.||+
T Consensus 93 r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL~ 171 (389)
T PLN03168 93 RHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVLR 171 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHHH
Confidence 3467899999999999999999999999999999999876677999999999999998654 378888 79999999999
Q ss_pred HHHHHHHcCCCCeEEEEeeccccCCCCCC--CCcchhhhhhcccccceEEEEecCCCCc-cccceEEeeeeeecccCCcc
Q 044359 149 LVKDLLKVHKNSLALVLSMEAISSNGYTG--STKSMLISNTVFRMGGAAILLSNRQQDK-HIAKYKLKHLVRTHMGYDDQ 225 (401)
Q Consensus 149 ~A~~~i~~g~~~~vLvv~~e~~s~~~~~~--~d~~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~~l~~~~~~~~~~~~~ 225 (401)
+|.+++++++.++||||++|.+|..++.. .+.+++++..+|||||+|+||++++... ..+.|++....+. +.+++.
T Consensus 172 ~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~-~~p~s~ 250 (389)
T PLN03168 172 VAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGET-ILPESD 250 (389)
T ss_pred HHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeE-EEcCCC
Confidence 99999999999999999999999877431 1244567899999999999999865421 1123444422222 222221
Q ss_pred ccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCC
Q 044359 226 AYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGG 305 (401)
Q Consensus 226 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~ 305 (401)
.. +.+.....| ..+.+.+++|..+.+.+...++.+ +.. .++. ..|+++|++||+|
T Consensus 251 ~~--~~~~~~~~g-~~~~l~~~vp~~i~~~~~~~l~~~-------l~~------------~~~~---~~d~~~~v~Hqgg 305 (389)
T PLN03168 251 GA--IDGHLTEAG-LIFHLMKDVPGLISKNIEKFLNEA-------RKC------------VGSP---DWNEMFWAVHPGG 305 (389)
T ss_pred Cc--cCceEecCc-eEEEECHHHHHHHHHHHHHHHHHH-------HHh------------cCCC---ccccceEEecCCc
Confidence 11 111111112 235566777777766555444432 111 1222 3567899999999
Q ss_pred hHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCC--------CeEEEEeeccchhhcceeee
Q 044359 306 RAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKG--------DRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 306 ~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~G--------d~vll~~~G~G~s~~~~~l~ 377 (401)
+++++.++++||++++|+..|+.++++||||+|||+|++|++++++ ++++| |++++++||+|++|++++||
T Consensus 306 ~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t~~~~llr 384 (389)
T PLN03168 306 PAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLTLEVLVLR 384 (389)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhhhhhhhhe
Confidence 9999999999999999998888899999999999999999999865 55554 89999999999999999999
Q ss_pred eecc
Q 044359 378 CVSN 381 (401)
Q Consensus 378 ~~~~ 381 (401)
|..+
T Consensus 385 ~~~~ 388 (389)
T PLN03168 385 AAAN 388 (389)
T ss_pred eccc
Confidence 9543
No 9
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.1e-53 Score=422.78 Aligned_cols=348 Identities=18% Similarity=0.272 Sum_probs=261.6
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhc-CCCChhhHHHHHHHHHHcCCCCceecCCC--ccCCC-----CCCC----
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTS-NVFDKESLDFQEKVLEKSGIGDESCIPLN--LHEMQ-----PDVS---- 70 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~-~~~~~~~~~~~~~i~~~~GI~~R~~~~~~--~~~~~-----~~~~---- 70 (401)
+++|.|+|+|+|++. |+|+|+.+.+... ...++...+.+++|++++||++||++.++ ..+.+ ..++
T Consensus 21 ~~~I~gigt~~P~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r 98 (391)
T PLN03169 21 KATILALGKAFPSQL--VPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQR 98 (391)
T ss_pred CeEEEEEEeeCCCee--cCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHH
Confidence 589999999999997 9999999965542 11122223447789999999999987531 11111 1112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCc-ceEEeecccchhHHHHHHH
Q 044359 71 LKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNI-KSINLSGMGCSAGILSISL 149 (401)
Q Consensus 71 l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~-~~~~i~~~gC~~~~~aL~~ 149 (401)
+..+.+.+.+|+++|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++.+ .++|++ +||+|++.||++
T Consensus 99 ~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~~~aL~~ 177 (391)
T PLN03169 99 LDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGGVAGLRV 177 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHHHHHHHH
Confidence 345788999999999999999999999999999999888999999999999999998665 379999 699999999999
Q ss_pred HHHHHHcCCCCeEEEEeeccccCCCCCC--CCcchhhhhhcccccceEEEEecCCCCc-cccceEEeeeeeecccCCccc
Q 044359 150 VKDLLKVHKNSLALVLSMEAISSNGYTG--STKSMLISNTVFRMGGAAILLSNRQQDK-HIAKYKLKHLVRTHMGYDDQA 226 (401)
Q Consensus 150 A~~~i~~g~~~~vLvv~~e~~s~~~~~~--~d~~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~~l~~~~~~~~~~~~~~ 226 (401)
|.+++++++.++||||++|.+|..++.. .+..+.++..+|||||+|+||++++... ..+.|++....+. +.+++..
T Consensus 178 A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~-~ip~~~~ 256 (391)
T PLN03169 178 AKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQ-FLPGTEK 256 (391)
T ss_pred HHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeee-EcCCCcc
Confidence 9999999999999999999998876531 1123445789999999999999865421 1123443322111 1111110
Q ss_pred cccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcc--eEeecCC
Q 044359 227 YSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFE--HFCIHAG 304 (401)
Q Consensus 227 ~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did--~~i~Hq~ 304 (401)
.+-+.....| ..+.+.+++|..+.+.+...++.+ ++. .++. .+|+| +|++||+
T Consensus 257 --~~~~~~~~~g-~~~~~g~~v~~~~~~~~~~~i~~~-------L~~------------~gl~---~~did~~~~v~Hq~ 311 (391)
T PLN03169 257 --TIDGRLTEEG-INFKLGRELPQKIEDNIEGFCKKL-------MKK------------AGLV---EKDYNDLFWAVHPG 311 (391)
T ss_pred --ccCceecCCc-eEEEECcHHHHHHHHHHHHHHHHH-------HHH------------cCCC---CCCCCcceEEecCC
Confidence 0100001111 234556667766655544433322 111 2454 56788 9999999
Q ss_pred ChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCC---CCCeEEEEeeccchhhcceeeeee
Q 044359 305 GRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVK---KGDRVWQIAFGSGFKVNSAVWKCV 379 (401)
Q Consensus 305 ~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~---~Gd~vll~~~G~G~s~~~~~l~~~ 379 (401)
|+++++.++++||++++|+..|+.++++||||+|||+|++|++++++++++ +||+++|++||+|++|+++++||.
T Consensus 312 n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s~~~~ll~~~ 389 (391)
T PLN03169 312 GPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGITFEGILARNL 389 (391)
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHhHHHHHHhhh
Confidence 999999999999999999988889999999999999999999999888776 699999999999999999999984
No 10
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.3e-53 Score=385.45 Aligned_cols=345 Identities=22% Similarity=0.282 Sum_probs=286.8
Q ss_pred eEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHH-HcCCCCceecCCCccCCCCCCC----hHHHHHHH
Q 044359 4 VYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLE-KSGIGDESCIPLNLHEMQPDVS----LKRSREET 78 (401)
Q Consensus 4 v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~-~~GI~~R~~~~~~~~~~~~~~~----l~~~~~~~ 78 (401)
.+|.|+++++|++. ++|.|+.+.+...+ ..+..+.+.+.+. +.+|++|+++.| +.+++..++ ++.|.|++
T Consensus 2 a~i~sv~t~~Ppy~--~~Qse~~d~f~~~~--~~~~~~~I~r~l~~~~~i~~R~~v~P-l~~y~e~~~f~ekN~ifie~a 76 (356)
T COG3424 2 AVIASVATALPPYR--YNQSEITDSFAELP--FQEGREDIPRVLHANAQINRRHLVLP-LDWYREPHGFGEKNEIFIEEA 76 (356)
T ss_pred ceeeecccCCCccc--cchHHHHHHHHHhc--cccchHHHHHHHhhccccccceeccc-HhhccCCCChhhhhhhHHHHH
Confidence 57999999999997 99999998877653 2233555667676 788999988877 444443333 46789999
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCC
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHK 158 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~ 158 (401)
..++++|+|+||+.+++.|+|||+|+++|+++...|++..+|..+||+++++..+.++++||+++..||..|+++++++|
T Consensus 77 ~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P 156 (356)
T COG3424 77 VPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAP 156 (356)
T ss_pred HHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeeccccCCCCCCCC-cchhhhhhcccccceEEEEecCCCCcc--ccceEEeeeeeecccCCcccccccccccc
Q 044359 159 NSLALVLSMEAISSNGYTGST-KSMLISNTVFRMGGAAILLSNRQQDKH--IAKYKLKHLVRTHMGYDDQAYSSVFQQQD 235 (401)
Q Consensus 159 ~~~vLvv~~e~~s~~~~~~~d-~~~~i~~~lfGDGAaA~ll~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
..+|||||+|.||.++.+.++ .++++...+||||+||+|++.+..... +..+.+++.. +.+..|++ +.|.|..+
T Consensus 157 ~~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~-StL~~dse--~~Mgwdv~ 233 (356)
T COG3424 157 DANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSF-STLYPDSE--DIMGWDVG 233 (356)
T ss_pred cceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccc-cccCCccc--cccceeec
Confidence 999999999999998866444 448999999999999999998655321 2233333322 33344432 34444444
Q ss_pred CCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHHHHHH
Q 044359 236 KDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEEN 315 (401)
Q Consensus 236 ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~~~~~ 315 (401)
+.| ..+.+++++|.++...+..++..+ +..+ ++. .+||+.|+.|++++++++++.+.
T Consensus 234 d~G-~~~vlSrdlp~lIe~~l~~~V~~f-------L~~~------------~ls---~~dI~~w~~HPGG~KVida~~~s 290 (356)
T COG3424 234 DQG-LKVVLSRDLPNLIESYLAPNVTTF-------LATH------------GLS---IEDIEAWVVHPGGPKVIDAYEES 290 (356)
T ss_pred CCc-EEEEEcCchhHHHHHHhhhhHHHH-------HHHc------------CCc---hhhhceeeeCCCCchHHHHHHHh
Confidence 343 457799999999988877776654 3322 344 89999999999999999999999
Q ss_pred cCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeec
Q 044359 316 LKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVS 380 (401)
Q Consensus 316 lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~ 380 (401)
||++++++..||+.+++||||+||++++.|.+.+++. .++|.+++++++||||+.+.++++|.+
T Consensus 291 Lgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 291 LGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred cCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 9999999999999999999999999999999999876 689999999999999999999999986
No 11
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=3e-53 Score=419.98 Aligned_cols=349 Identities=18% Similarity=0.239 Sum_probs=269.2
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCC-ChhhH-HHHHHHHHHcCCCCceecCCC--ccCCCC---------CC
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVF-DKESL-DFQEKVLEKSGIGDESCIPLN--LHEMQP---------DV 69 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~-~~~~~-~~~~~i~~~~GI~~R~~~~~~--~~~~~~---------~~ 69 (401)
+.+|.++|+..|++. ++|+|+.+++.+.... +.++. ++++++++++||++||++.++ +.+.+. +.
T Consensus 20 ~~~i~~i~ta~P~~~--~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~ 97 (401)
T PLN03170 20 PATVLAIGTATPANC--VHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDA 97 (401)
T ss_pred CeEEEEEeecCCCcc--ccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHH
Confidence 478999999999997 9999999998765311 12223 348899999999999986531 111111 12
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCc-ceEEeecccchhHHHHHH
Q 044359 70 SLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNI-KSINLSGMGCSAGILSIS 148 (401)
Q Consensus 70 ~l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~-~~~~i~~~gC~~~~~aL~ 148 (401)
.++.|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++.+ .+++++ +||+|++.||+
T Consensus 98 r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL~ 176 (401)
T PLN03170 98 RQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVLR 176 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHHH
Confidence 3467889999999999999999999999999999999876666999999999999998654 478999 69999999999
Q ss_pred HHHHHHHcCCCCeEEEEeeccccCCC-CCCC-CcchhhhhhcccccceEEEEecCCCCc-cccceEEeeeeeecccCCcc
Q 044359 149 LVKDLLKVHKNSLALVLSMEAISSNG-YTGS-TKSMLISNTVFRMGGAAILLSNRQQDK-HIAKYKLKHLVRTHMGYDDQ 225 (401)
Q Consensus 149 ~A~~~i~~g~~~~vLvv~~e~~s~~~-~~~~-d~~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~~l~~~~~~~~~~~~~ 225 (401)
+|.+++++++.++||||++|.+|..+ ++.. +.++.++..+|||||+|+||++++... ..+.|++.+. .+.+.+++.
T Consensus 177 ~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~-~~~~~p~~~ 255 (401)
T PLN03170 177 VAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSA-SQTILPDSE 255 (401)
T ss_pred HHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeec-cceEecCCc
Confidence 99999999999999999999999887 3421 134566789999999999999865421 1123555432 122222221
Q ss_pred ccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCC
Q 044359 226 AYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGG 305 (401)
Q Consensus 226 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~ 305 (401)
.. +-+.-...| ..+.+.+++|..+.+.+...++.+ ++. .++. .+|+++|++||+|
T Consensus 256 ~~--~~~~i~~~G-~~~~l~~~vp~~~~~~i~~~v~~~-------L~~------------~gl~---~~di~~~v~Hqgg 310 (401)
T PLN03170 256 GA--IDGHLREVG-LTFHLLKDVPGLISKNIERSLEEA-------FKP------------LGIT---DYNSIFWVAHPGG 310 (401)
T ss_pred cc--ccceEEcCC-eEEEEehHHHHHHHHHHHHHHHHH-------HHh------------cCCC---ccccCeEEecCCc
Confidence 11 101001112 245567788887776665554432 111 2444 6789999999999
Q ss_pred hHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHH----HcCCCCCC---CeEEEEeeccchhhcceeeee
Q 044359 306 RAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLE----AKGKVKKG---DRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 306 ~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~----~~g~l~~G---d~vll~~~G~G~s~~~~~l~~ 378 (401)
+++++.+++.||++++|+..|+.++++||||+|+|+|++|++++ ++|++++| |++++++||+|++|+++++||
T Consensus 311 ~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~ 390 (401)
T PLN03170 311 PAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHS 390 (401)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHhee
Confidence 99999999999999999988889999999999999999999997 46888888 899999999999999999999
Q ss_pred ec
Q 044359 379 VS 380 (401)
Q Consensus 379 ~~ 380 (401)
..
T Consensus 391 ~~ 392 (401)
T PLN03170 391 VP 392 (401)
T ss_pred cc
Confidence 44
No 12
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=5.1e-53 Score=416.18 Aligned_cols=343 Identities=36% Similarity=0.526 Sum_probs=264.2
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCC--ChhhHHHHHHHHHHcCCCCceecCC--CccCC-------CCCCCh
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVF--DKESLDFQEKVLEKSGIGDESCIPL--NLHEM-------QPDVSL 71 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~--~~~~~~~~~~i~~~~GI~~R~~~~~--~~~~~-------~~~~~l 71 (401)
.++|.++|+|+|+++ |+|+|+.+++...... .+...++++++++++||++||++.+ +.... ..+...
T Consensus 1 ~~~I~~~~~~~P~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (361)
T cd00831 1 AATILAIGTAVPPHR--VPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERN 78 (361)
T ss_pred CcEEEEEEEeCCCCc--CCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcch
Confidence 478999999999998 9999999988653211 1234556789999999999999876 22110 113345
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHH
Q 044359 72 KRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVK 151 (401)
Q Consensus 72 ~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~ 151 (401)
..+.+++.+|+.+|+++||+++|++++|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|.
T Consensus 79 ~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~ 158 (361)
T cd00831 79 DIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAK 158 (361)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHH
Confidence 67888999999999999999999999999999999877788999999999999998679999999569999999999999
Q ss_pred HHHHcCCCCeEEEEeeccccCCCCCCCC-cchhhhhhcccccceEEEEecCCCCcc--ccceEEeeeeeecccCCccccc
Q 044359 152 DLLKVHKNSLALVLSMEAISSNGYTGST-KSMLISNTVFRMGGAAILLSNRQQDKH--IAKYKLKHLVRTHMGYDDQAYS 228 (401)
Q Consensus 152 ~~i~~g~~~~vLvv~~e~~s~~~~~~~d-~~~~i~~~lfGDGAaA~ll~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~ 228 (401)
+++++++.++||||++|.+|..+++ .+ +..+++.++|||||+|+||++++.... ...+++.+.....+ ++.. .
T Consensus 159 ~~~~~~~~~~aLvv~~e~~s~~~~~-~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~-p~~~--~ 234 (361)
T cd00831 159 DLLEANPGARVLVVSTELCSLWYRG-PDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLL-PDSE--D 234 (361)
T ss_pred HHHHHCCCCEEEEEEeecccceeCC-CCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceee-ecCC--C
Confidence 9999999999999999999997765 44 666667899999999999998765320 12344433211111 1111 1
Q ss_pred cccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--c--CCCcchhhhcceEeecCC
Q 044359 229 SVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--K--TYVPNFKKAFEHFCIHAG 304 (401)
Q Consensus 229 ~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~--~l~~~~~~did~~i~Hq~ 304 (401)
.+.+... .....+.+.++++....+.+...++ +.+ . ++. .+|||+|++||+
T Consensus 235 ~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~i~---------------------~~L~~~~~g~~---~~did~~~~H~~ 289 (361)
T cd00831 235 AMGWHLG-EEGLTFVLSRDVPRLVEKNLERVLR---------------------KLLARLGIGLF---KLAFDHWCVHPG 289 (361)
T ss_pred ceEEEEE-cceEEEEeChhHHHHHHHHHHHHHH---------------------HHhccccCCCc---cccceEEEECCC
Confidence 0111000 1112233334444433332222222 222 2 444 789999999999
Q ss_pred ChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceee
Q 044359 305 GRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVW 376 (401)
Q Consensus 305 ~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l 376 (401)
|+++++.+++.||++++|+..|+.++++||||+|||+|++|++++++|++++||+|++++||+|++|++++|
T Consensus 290 ~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 290 GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 999999999999999999987789999999999999999999999999999999999999999999999885
No 13
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=5.2e-53 Score=416.63 Aligned_cols=348 Identities=20% Similarity=0.222 Sum_probs=266.0
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCC--CChhhHHHHHHHHHHcCCCCceecCCCc--cCCC--C-------CC
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNV--FDKESLDFQEKVLEKSGIGDESCIPLNL--HEMQ--P-------DV 69 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~--~~~~~~~~~~~i~~~~GI~~R~~~~~~~--~~~~--~-------~~ 69 (401)
.++|.++|+..|++. ++|+|+.+++.+... ..+...++++++++++||++||++.++. .+.+ . +.
T Consensus 16 ~~~i~~i~ta~P~~~--~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~ 93 (391)
T PLN03173 16 PATIMAIGTSTPPNC--VDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDA 93 (391)
T ss_pred CeEEEEEEccCCCcc--cCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHH
Confidence 478999999999997 999999999876531 1122334578999999999999865321 1111 1 12
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcc-eEEeecccchhHHHHHH
Q 044359 70 SLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIK-SINLSGMGCSAGILSIS 148 (401)
Q Consensus 70 ~l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~-~~~i~~~gC~~~~~aL~ 148 (401)
.++.|.+.+.+|+++|+++||+++|++++|||+||++|+++...|+.+.+|+++||+++.+. +++++ +||+|++.||+
T Consensus 94 r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL~ 172 (391)
T PLN03173 94 RQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQ-QGCFAGGTVLR 172 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhc-CccHHHHHHHH
Confidence 35678899999999999999999999999999999998666568999999999999986664 45666 79999999999
Q ss_pred HHHHHHHcCCCCeEEEEeeccccCCC-CCCC-CcchhhhhhcccccceEEEEecCCCCc-cccceEEeeeeeecc-cCCc
Q 044359 149 LVKDLLKVHKNSLALVLSMEAISSNG-YTGS-TKSMLISNTVFRMGGAAILLSNRQQDK-HIAKYKLKHLVRTHM-GYDD 224 (401)
Q Consensus 149 ~A~~~i~~g~~~~vLvv~~e~~s~~~-~~~~-d~~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~~l~~~~~~~~-~~~~ 224 (401)
+|++++++++.++||||++|.+|..+ ++.. +.+++++..+|||||+|+||++++... ..+.|++.+..+..+ .+++
T Consensus 173 ~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~~ 252 (391)
T PLN03173 173 LAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSDG 252 (391)
T ss_pred HHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCcc
Confidence 99999999999999999999999654 3321 244567889999999999999854321 123466654322222 2332
Q ss_pred cccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCC
Q 044359 225 QAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAG 304 (401)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~ 304 (401)
.... .+. ..| ..+.+.+++|..+.+.+...++.+ ++. .++. .+|||+|++||+
T Consensus 253 ~~~~-~i~---~~G-~~~~l~~~vp~~~~~~~~~~i~~~-------L~~------------~gl~---~~di~~~v~Hqg 305 (391)
T PLN03173 253 AIDG-HLR---EVG-LTFHLLKDVPGLISKNVEKSLTEA-------FKP------------LGIS---DWNSLFWIAHPG 305 (391)
T ss_pred ceee-EEE---cCc-eEEEEecHHHHHHHHHHHHHHHHH-------HHh------------cCCC---ccccCeEEECCC
Confidence 2111 111 122 345677888887766655554432 111 2444 689999999999
Q ss_pred ChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHc----CCCCC--C-CeEEEEeeccchhhcceeee
Q 044359 305 GRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAK----GKVKK--G-DRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 305 ~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~----g~l~~--G-d~vll~~~G~G~s~~~~~l~ 377 (401)
|+++++.+++.||++++|+..|+.++++||||+|||+|++|++++++ +.+++ | +++++++||||+|++++++|
T Consensus 306 g~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e~~ll~ 385 (391)
T PLN03173 306 GPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVETVVLH 385 (391)
T ss_pred cHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHHHHHHh
Confidence 99999999999999999999888999999999999999999999953 44433 3 88999999999999999999
Q ss_pred eec
Q 044359 378 CVS 380 (401)
Q Consensus 378 ~~~ 380 (401)
|..
T Consensus 386 ~~~ 388 (391)
T PLN03173 386 SVA 388 (391)
T ss_pred hcc
Confidence 944
No 14
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.3e-53 Score=417.36 Aligned_cols=333 Identities=16% Similarity=0.188 Sum_probs=253.5
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEE 80 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~ 80 (401)
|++++|.|+|+|+|++. |+|+++.+.... .+. ...+++.+++||++||++.+++ ++.+
T Consensus 5 ~~~~~I~~~g~~lP~~~--v~~~~~~~~~~~---~~~---~~~~~i~~~~Gi~~R~~~~~~e--------------~~~~ 62 (353)
T PRK12880 5 FDKAKISGICVSVPEHK--ICIDDELESVFS---NDI---KTLKRMKKVIGLNTRYICDENT--------------CVSD 62 (353)
T ss_pred ccccEEEEEEEECCCeE--ecHHHHHHHhcC---cch---hhhhhhhhccCceEEEeCCCCC--------------CHHH
Confidence 57899999999999997 999975443211 111 1246788999999999987632 2679
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKN 159 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~ 159 (401)
|+++|+++||+++|++++|||+||++| ++++..|+++.+|+++||+++++.+||++ .||+|++.||++|.+++++|+.
T Consensus 63 la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~~~ 141 (353)
T PRK12880 63 LGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSGLG 141 (353)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999998 56999999999999999998789999998 5999999999999999999988
Q ss_pred CeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCC
Q 044359 160 SLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGN 239 (401)
Q Consensus 160 ~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 239 (401)
+ ||||++|.+|+.+++ .++. +..+|||||+|+||+++++.. ..+ .+.+++..++.+..+.++...
T Consensus 142 ~-~LVv~~e~~S~~~~~-~d~~---~~~lFGDGAaA~vl~~~~~~~--~~~--------~~~~~~~~~~~~~~p~g~~~~ 206 (353)
T PRK12880 142 K-ILLICGDTLSKFIHP-KNMN---LAPIFGDGVSATLIEKTDFNE--AFF--------ELGSDGKYFDKLIIPKGAMRI 206 (353)
T ss_pred C-EEEEEehhhhccCCc-ccCC---ceeeecccceEEEEEecCCCC--ceE--------EEEecCCCCCeEEecCCCcCC
Confidence 8 999999999999877 4554 568999999999999765421 111 234566666655554322111
Q ss_pred eeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc------cCCCcchhhhcceEeecCCChHHHHHHH
Q 044359 240 VGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS------KTYVPNFKKAFEHFCIHAGGRAIIDAVE 313 (401)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~l~~~~~~did~~i~Hq~~~~~~~~~~ 313 (401)
.+.........+... ..+....+.+++.+.|.++.+.+++.+ .++. .+|||+|++||+|+++++.+.
T Consensus 207 ~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~---~~did~~v~HQ~~~~i~~~i~ 279 (353)
T PRK12880 207 PKADIFNDDSLMQTE----EFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVD---EKDIAFHLFHQSNAYLVDCIK 279 (353)
T ss_pred Ccccccccccccccc----ccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEECCCCHHHHHHHH
Confidence 111100000000000 000011123445566666666666554 3554 799999999999999999999
Q ss_pred HHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccCCc
Q 044359 314 ENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDP 384 (401)
Q Consensus 314 ~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~ 384 (401)
++||+|++|+. ..++++||||+|||+|++|++++++++++ ++|++||+|++|+++++||+...-|
T Consensus 280 ~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~~~~~~ 344 (353)
T PRK12880 280 EELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFKDLYTK 344 (353)
T ss_pred HHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEECCcCCC
Confidence 99999999983 24689999999999999999999887764 9999999999999999999665544
No 15
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=2.4e-52 Score=414.01 Aligned_cols=352 Identities=17% Similarity=0.250 Sum_probs=262.5
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhc---CCCChhhHHHHHHHHHHcCCCCceecCCCc--cCCC-------C--C
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTS---NVFDKESLDFQEKVLEKSGIGDESCIPLNL--HEMQ-------P--D 68 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~---~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~--~~~~-------~--~ 68 (401)
+++|.|+|+|+|++. |+|+|+.+++.+. ..+ ++..+.+++|++++||++||++.++. .+.+ | +
T Consensus 22 ~~~I~gigt~~P~~~--v~n~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~ 98 (399)
T PLN03171 22 LAAVLAIGTANPANC--VPQDEFPDFYFRATKSDHL-TALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSLD 98 (399)
T ss_pred CcEEEEEEeeCCCcc--cCHHHHHHHHHHHhccccc-HHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCHH
Confidence 578999999999997 9999999985432 111 11223467999999999999987542 0000 1 1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcc-eEEeecccchhHHHHH
Q 044359 69 VSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIK-SINLSGMGCSAGILSI 147 (401)
Q Consensus 69 ~~l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~-~~~i~~~gC~~~~~aL 147 (401)
..++.|.+.+.+|+++|+++||+++|++++|||+||++|+++...|+.+.+++++||++..+. ++++. +||+|++.||
T Consensus 99 ~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~aL 177 (399)
T PLN03171 99 ARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAAAL 177 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccHHHHHHH
Confidence 235678899999999999999999999999999999998654458999999999999985543 56777 5999999999
Q ss_pred HHHHHHHHcCCCCeEEEEeeccccCCCCCCCCc---chhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCc
Q 044359 148 SLVKDLLKVHKNSLALVLSMEAISSNGYTGSTK---SMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDD 224 (401)
Q Consensus 148 ~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~d~---~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~ 224 (401)
++|.+++++++.++||||++|.+|..+++ .|+ .++++..+|||||+|+||++.++..+.+.|++++.... . ++
T Consensus 178 ~~A~~li~~~~~~~vLVv~~e~~s~~~~~-~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~-~--~p 253 (399)
T PLN03171 178 RLAKDLAENNRGARVLVVAAEITLLLFNG-PDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQA-I--IP 253 (399)
T ss_pred HHHHHHHHhCCCCeEEEEEEeccccccCC-CCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeE-E--ec
Confidence 99999999999999999999999998865 332 34556789999999999998764321234565532221 1 22
Q ss_pred cccccccccccCCCCeeeEec-cCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecC
Q 044359 225 QAYSSVFQQQDKDGNVGVSIS-RSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHA 303 (401)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq 303 (401)
...+.+.+... .+...+.+. +.+|..+.+.++..+... +..+ ...-.++. .+|++|+ +||
T Consensus 254 ~~~~~~~~~~~-~~g~~~~~~~~~vp~~i~~~l~~~l~~~-------l~~~-------~~~~~g~~---~~di~~~-~Hq 314 (399)
T PLN03171 254 ESDDAINMHFT-EGGLDGNIGTRQVPGLIGDNIERCLLDA-------FAPL-------LGGDGGAE---WNDLFWA-VHP 314 (399)
T ss_pred CCchheEEEEE-cCCceEEECchhHHHHHHHHHHHHHHHH-------HHhh-------cccccCCC---cccceEE-EcC
Confidence 22222322111 122223444 677777766555443321 0000 00001333 5788776 699
Q ss_pred CChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCC--CCCC---CeEEEEeeccchhhcceeeee
Q 044359 304 GGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGK--VKKG---DRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 304 ~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~--l~~G---d~vll~~~G~G~s~~~~~l~~ 378 (401)
+|+++++.+.++||++++|+..|+.++++||||+|||+|++|++++++++ +++| |+++|++||+|++|++++|+|
T Consensus 315 ~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~Glt~~~~ll~~ 394 (399)
T PLN03171 315 GSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPGLTVDAMLLHA 394 (399)
T ss_pred CcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcccHHHHHHHhhc
Confidence 99999999999999999999877789999999999999999999998774 6788 999999999999999999999
Q ss_pred ecc
Q 044359 379 VSN 381 (401)
Q Consensus 379 ~~~ 381 (401)
.+.
T Consensus 395 ~~~ 397 (399)
T PLN03171 395 SGH 397 (399)
T ss_pred ccC
Confidence 763
No 16
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=5.6e-52 Score=403.51 Aligned_cols=317 Identities=14% Similarity=0.226 Sum_probs=246.3
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
+++|.++|+|+|++. |+|+|+.+.++ .++ +++.+++||++||++.+++ ++.+|+
T Consensus 3 ~~~I~~~g~~lP~~~--v~~~~~~~~~~----~~~------~~i~~~~Gi~~r~~~~~~e--------------~~~~la 56 (326)
T PRK05963 3 SSRIAGFGHAVPDRR--VENAEIEAQLG----LET------GWIERRTGIRCRRWAAPDE--------------TLSDLA 56 (326)
T ss_pred ccEEEEEEEECCCCe--ecHHHHHHHcC----CCH------HHhhhccCCeEEEEcCCCC--------------CHHHHH
Confidence 689999999999997 99999998753 222 4678999999999987643 257999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
++|+++||+++|++++|||+||++| ++++..|+.+.+|+++||++ ++.+||+++ +|+|++.||++|.++++++ .++
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~~~ 133 (326)
T PRK05963 57 ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-GKP 133 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-CCe
Confidence 9999999999999999999999987 46888999999999999998 689999995 9999999999999999997 499
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCee
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVG 241 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (401)
||||++|.+|..+++ .++. +..+|||||+|+||++++... . +++.+.+.+++..++.+..+.++...
T Consensus 134 aLVv~~d~~s~~~~~-~~~~---~~~lfGDgA~A~ll~~~~~~~----~---~~l~~~~~t~~~~~~~~~~~~gg~~~-- 200 (326)
T PRK05963 134 VLVVAANILSRRINM-AERA---SAVLFADAAGAVVLAPSAKAN----S---GVLGSQLISDGSHYDLIKIPAGGSAR-- 200 (326)
T ss_pred EEEEEechhhccCCc-cccC---ceEEEeecceEEEEEecCCCC----C---ceEEEEEEEcCCCCCeEEeCCCCcCC--
Confidence 999999999887765 3444 568999999999999876431 1 12234455566656544433221100
Q ss_pred eEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhh----hc--cCCCcchhhhcceEeecCCChHHHHHHHHH
Q 044359 242 VSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCK----KS--KTYVPNFKKAFEHFCIHAGGRAIIDAVEEN 315 (401)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l--~~l~~~~~~did~~i~Hq~~~~~~~~~~~~ 315 (401)
+...+... +.. .+ .+.++...+....+.+++ .+ .++. ++|||+|++||+|+++++.+.+.
T Consensus 201 -~~~~~~~~---~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~---~~did~~~~h~~~~~~~~~~~~~ 266 (326)
T PRK05963 201 -PFAPERDA---SEF--LM-----TMQDGRAVFTEAVRMMSGASQNVLASAAMT---PQDIDRFFPHQANARIVDKVCET 266 (326)
T ss_pred -CCcccccc---ccc--ce-----EecCCHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEeCCCCHHHHHHHHHH
Confidence 00000000 000 00 000111222222222222 22 3565 79999999999999999999999
Q ss_pred cCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeee
Q 044359 316 LKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 316 lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
||++++|+ ..++++|||+++||+|++|+++++++++++||+|++++||+|++|+++++||
T Consensus 267 l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 267 IGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred cCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 99999999 6899999999999999999999999999999999999999999999999997
No 17
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=5e-51 Score=403.74 Aligned_cols=326 Identities=19% Similarity=0.238 Sum_probs=245.3
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
+++|.|+|+|+|++. |+|+|+.+.++. ++ .++.+++||++||++.+++ ++.+|+
T Consensus 47 ~~~I~g~g~~lP~~~--v~n~el~~~~~~----~~------~~i~~~tGi~~R~~~~~~~--------------~~~~La 100 (379)
T PLN02326 47 GSKLVGCGSAVPKLL--ITNDDLSKLVDT----SD------EWIATRTGIRNRRVLSGDE--------------TLTSLA 100 (379)
T ss_pred CcEEEEEEEECCCce--ecHHHHHHhcCC----ch------hheecccCcceEeecCCCC--------------CHHHHH
Confidence 689999999999997 999999987541 12 4688999999999986643 267999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeE
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLA 162 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~v 162 (401)
.+|+++||+++|++++|||+||+++++....++.+..++++||++ +++++|++ ++|+|++.||++|.+++++|..++|
T Consensus 101 ~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~~v 178 (379)
T PLN02326 101 VEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYKNV 178 (379)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCCEE
Confidence 999999999999999999999998753323446788999999998 79999999 5999999999999999999999999
Q ss_pred EEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCe-e
Q 044359 163 LVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNV-G 241 (401)
Q Consensus 163 Lvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~ 241 (401)
|||++|.+|..+++ .++. +..+|||||+|+||++.+.... . +....+.+++..++.+.....+.... .
T Consensus 179 LVv~~e~~s~~~~~-~d~~---~~~lfGDGAaAvlL~~~~~~~~----~---i~~~~~~t~g~~~~~~~~~~~g~~~~~~ 247 (379)
T PLN02326 179 LVIGADALSRYVDW-TDRG---TCILFGDGAGAVVLQACDDDED----G---LLGFDMHSDGNGHKHLHATFKGEDDDSS 247 (379)
T ss_pred EEEEechhcCCCCc-cccC---ceEEEcceeEEEEEEEcCCCCC----c---eEEEEEEEcCCCCCeEEecCCCCccccc
Confidence 99999999988765 4554 4579999999999998764311 1 12233344544443322211000000 0
Q ss_pred eEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc------cCCCcchhhhcceEeecCCChHHHHHHHHH
Q 044359 242 VSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS------KTYVPNFKKAFEHFCIHAGGRAIIDAVEEN 315 (401)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~l~~~~~~did~~i~Hq~~~~~~~~~~~~ 315 (401)
............. . ..+..+.+++.+.+.++.+.+++.+ .++. .+|||+|++||+|+++++.+.+.
T Consensus 248 ~~~~~~~~~~~~~--~---~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~---~~dId~~v~Hq~n~~~~~~~~~~ 319 (379)
T PLN02326 248 GGNTNGVGDFPPK--K---ASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLT---AESIDWLLLHQANQRIIDAVAQR 319 (379)
T ss_pred ccccccccccccc--c---ccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEECCCCHHHHHHHHHH
Confidence 0000000000000 0 0000011233444555555444443 3555 79999999999999999999999
Q ss_pred cCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeee
Q 044359 316 LKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 316 lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
||++++|+ +.++++||||+|||+|++|++++++|++++||+|+|++||+|++|++++++|
T Consensus 320 Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 320 LGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred cCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 99999999 5789999999999999999999999999999999999999999999999987
No 18
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=7.7e-51 Score=395.36 Aligned_cols=318 Identities=18% Similarity=0.215 Sum_probs=240.2
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
.++|.|+|+|+|+++ |+|+|+.+.++. +. .+|.+++||++||++.+++ +..+|+
T Consensus 2 ~v~I~~~g~~lP~~~--v~~~e~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~--------------~~~~la 55 (326)
T CHL00203 2 GVHILSTGSSVPNFS--VENQQFEDIIET----SD------HWISTRTGIKKRHLAPSST--------------SLTKLA 55 (326)
T ss_pred ccEEEEEEEECCCeE--EcHHHHHHhcCC----Ch------hhEeeccCeEEEEeCCCCC--------------CHHHHH
Confidence 589999999999997 999999987642 11 3677999999999877643 257999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
.+|+++||+++|++++|||.||++|+ ++.. +..+..++++||+. ++++++++ ++|+|++.||++|.++|++|..++
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~-~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~ 132 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDL-FGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKN 132 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999874 4433 34578899999998 68999999 599999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCee
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVG 241 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (401)
+|||++|.+|..+++ .++. +.++|||||+|+||++.+... ++...+.++++.++.+.....+.....
T Consensus 133 ~Lvv~~e~~s~~~~~-~~~~---~~~~fgDga~A~ll~~~~~~~---------~~~~~~~t~g~~~~~~~~~~~~~~~~~ 199 (326)
T CHL00203 133 ILVVGADTLSKWIDW-SDRK---TCILFGDGAGAAIIGASYENS---------ILGFKLCTDGKLNSHLQLMNKPVNNQS 199 (326)
T ss_pred EEEEEehhhhCcCCc-ccCC---ceEEEcceeeEEEEEEcCCCC---------eEEEEEEEcCCCcceEEecCCCCCccc
Confidence 999999999998876 4443 568999999999999865421 112233345443332211100000000
Q ss_pred eEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhh----c--cCCCcchhhhcceEeecCCChHHHHHHHHH
Q 044359 242 VSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKK----S--KTYVPNFKKAFEHFCIHAGGRAIIDAVEEN 315 (401)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l--~~l~~~~~~did~~i~Hq~~~~~~~~~~~~ 315 (401)
+.... .|.. ....+.+++.+.+.++.+.+++. | .++. .+|||+|++||+|+++++.+++.
T Consensus 200 ~~~~~-~~~~----------~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~---~~did~~~~hq~~~~~~~~~~~~ 265 (326)
T CHL00203 200 FGTTK-LPQG----------QYQSISMNGKEVYKFAVFQVPAVIIKCLNALNIS---IDEVDWFILHQANKRILEAIANR 265 (326)
T ss_pred ccccc-cccC----------CcceEEECCHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEECCCCHHHHHHHHHH
Confidence 00000 0000 00000011122233322222222 2 3555 89999999999999999999999
Q ss_pred cCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeee
Q 044359 316 LKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCV 379 (401)
Q Consensus 316 lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~ 379 (401)
||+|++|+ ..++++||||+|||+|++|++++++|++++||+|++++||+|++|+++++||.
T Consensus 266 lgl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~~ 326 (326)
T CHL00203 266 LSVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKWK 326 (326)
T ss_pred hCCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEeC
Confidence 99999999 57999999999999999999999999999999999999999999999999985
No 19
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=7.2e-50 Score=389.16 Aligned_cols=309 Identities=15% Similarity=0.188 Sum_probs=240.6
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
++++|.++|+|+|++. |+|+|+.+.++ ... +++.+++||++||++.+ . .+.+|
T Consensus 3 ~~~~I~~~g~~lP~~~--v~~~~~~~~~~----~~~------~~i~~~~Gi~~R~~~~~-~--------------~~~~l 55 (329)
T PRK07204 3 RYISIKGIGTYLPKRK--VDSLELDKKLD----LPE------GWVLKKSGVKTRHFVDG-E--------------TSSYM 55 (329)
T ss_pred CCcEEEEEEEeCCCce--ecHHHHHHhhC----CCH------hHhhhccCceEEeecCC-C--------------CHHHH
Confidence 4689999999999997 99999998653 222 46788999999998873 2 25799
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCC-CcceEEeecccchhHHHHHHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRS-NIKSINLSGMGCSAGILSISLVKDLLKVHKN 159 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~-~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~ 159 (401)
+.+|+++||+++|++++|||+||+++ ++++..|+.+.+|+++||+++ .+++++++ ++|+|++.||++|..++++|..
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~~ 134 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGRY 134 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999987 466678999999999999974 37999999 5999999999999999999999
Q ss_pred CeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCC--
Q 044359 160 SLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKD-- 237 (401)
Q Consensus 160 ~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-- 237 (401)
++||||++|.+|..+++ .++. +.++|||||+|+||+++++.. +++ .+++.+++..++....+..+.
T Consensus 135 ~~~Lvv~~e~~s~~~~~-~~~~---~~~lfGDGAaA~ll~~~~~~~-----~il---~~~~~t~~~~~~~~~~~~~~~~~ 202 (329)
T PRK07204 135 KRVLIISSEISSVGLNW-GQNE---SCILFGDGAAAVVITKGDHSS-----RIL---ASHMETYSSGAHLSEIRGGGTMI 202 (329)
T ss_pred CEEEEEEeccccCCCCc-ccCc---ceEEEecccEEEEEEEcCCCC-----cEE---EEEEEEecCCCCceEEecCCcCC
Confidence 99999999999887655 3333 468999999999999876432 222 233333333222111110000
Q ss_pred -----C---CeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHH----Hhhhc--cCCCcchhhhcceEeecC
Q 044359 238 -----G---NVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSV----VCKKS--KTYVPNFKKAFEHFCIHA 303 (401)
Q Consensus 238 -----g---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l--~~l~~~~~~did~~i~Hq 303 (401)
. ..++.+.. ++.+.+..+... +.+.+ .++. ++|||+|++||
T Consensus 203 ~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~i~~~L~~~gl~---~~did~~~~H~ 257 (329)
T PRK07204 203 HPREYSEERKEDFLFDM----------------------NGRAIFKLSSKYLMKFIDKLLMDAGYT---LADIDLIVPHQ 257 (329)
T ss_pred CCcccccccccCceEEE----------------------CCHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEeCC
Confidence 0 00000111 111122222222 22222 3565 89999999999
Q ss_pred CChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeee
Q 044359 304 GGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 304 ~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
+|.++++.+.+.|++|++|+ +.++++|||++|||+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 258 ~~~~~~~~i~~~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 258 ASGPAMRLIRKKLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred CCHHHHHHHHHHcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 99999999999999999998 6899999999999999999999999999999999999999999999999986
No 20
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.8e-49 Score=384.33 Aligned_cols=316 Identities=17% Similarity=0.258 Sum_probs=243.8
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
.+++|.++|+|+|+++ |+++|+.+.++ .+. +++++++||++||++.+++ +..+|
T Consensus 3 ~~~~I~~ig~~~P~~~--v~~~e~~~~~~----~~~------~~i~~~~Gi~~r~~~~~~~--------------~~~~l 56 (325)
T PRK12879 3 SYARITGIGTYVPPRV--LTNDDLETFID----TSD------EWIVQRTGIKERRIAHVEE--------------YTSDL 56 (325)
T ss_pred CCCEEEEEEEECCCcE--EcHHHHHHhcC----CCH------HHhhhccCceEEEECCCCC--------------CHHHH
Confidence 3689999999999997 99999998753 222 4588899999999987643 25799
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNS 160 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~ 160 (401)
+.+|+++||+++|+++++||.||++++ +++..|+.+.+++++||++ ++++++++ ++|+|++.||.+|.++|++|..+
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~~ 134 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLYK 134 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999874 5778899999999999997 58999999 59999999999999999999999
Q ss_pred eEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCe
Q 044359 161 LALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNV 240 (401)
Q Consensus 161 ~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 240 (401)
+||||++|.+|..+++ .++. ...+|||||+|+||++++... ++....+.+++..++.+..+.. +.
T Consensus 135 ~~Lvv~~e~~s~~~~~-~~~~---~~~~~GDgAaA~ll~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~--~~- 199 (325)
T PRK12879 135 KVLVIGAERLSKVTDY-TDRT---TCILFGDGAGAVVLEATENEP--------GFIDYVLGTDGDGGDILYRTGL--GT- 199 (325)
T ss_pred EEEEEEehhhcCcCCc-cccC---ceEEEeecceEEEEEecCCCC--------CeEEEEEEEcCCCCCeEEEcCC--CC-
Confidence 9999999999887765 3444 457999999999999977532 1223333444444443332211 00
Q ss_pred eeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHH----Hhhhc--cCCCcchhhhcceEeecCCChHHHHHHHH
Q 044359 241 GVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSV----VCKKS--KTYVPNFKKAFEHFCIHAGGRAIIDAVEE 314 (401)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l--~~l~~~~~~did~~i~Hq~~~~~~~~~~~ 314 (401)
....+ +.... .. ..+++.+.+..+.+. +.+.+ .++. ++|||+|++||+|.++++.+.+
T Consensus 200 --~~~~~-~~~~~----~~------~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~---~~did~~~~h~~~~~~~~~~~~ 263 (325)
T PRK12879 200 --TMDRD-ALSGD----GY------IVQNGREVFKWAVRTMPKGARQVLEKAGLT---KDDIDWVIPHQANLRIIESLCE 263 (325)
T ss_pred --CCCcc-ccccC----cc------EEEcCHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEECCCCHHHHHHHHH
Confidence 00000 00000 00 000111112222222 22222 3555 7999999999999999999999
Q ss_pred HcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeee
Q 044359 315 NLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCV 379 (401)
Q Consensus 315 ~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~ 379 (401)
.||++++|+ ..++++|||+++||+|++|++++++|++++||++++++||+|++|+++++||+
T Consensus 264 ~lg~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~~ 325 (325)
T PRK12879 264 KLGIPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKWG 325 (325)
T ss_pred HcCCCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEeC
Confidence 999999999 46899999999999999999999999999999999999999999999999994
No 21
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6.2e-49 Score=384.01 Aligned_cols=321 Identities=15% Similarity=0.158 Sum_probs=245.1
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCC-CChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNV-FDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETE 79 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~-~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~ 79 (401)
+++++|.++|+|+|+++ ++|+|+.+.+..... .... ..++.+.+||++||+..++. +..
T Consensus 3 ~~~v~I~~~g~~lP~~~--v~~~~~~~~~~~~~~~~~~~----~~~i~~~~Gi~~R~~~~~~~--------------~~~ 62 (338)
T PRK09258 3 YSNVAILSLAYELAPVV--VTSSEIEERLAPLYERLRLP----PGQLEALTGIRERRWWPEGT--------------QLS 62 (338)
T ss_pred ccceEEEEEEecCCCcc--CcHHHHHHHhhhcccccCCC----hhHhhhhcCceeEecCCCCC--------------CHH
Confidence 46899999999999997 999999997654211 1111 14567789999999875532 257
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCC
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHK 158 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~ 158 (401)
+|+.+|+++||+++|+++++||+||+++ ++++..|+.+..++++||++++++++++++ +|+|++.||++|.++|++|.
T Consensus 63 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i~~g~ 141 (338)
T PRK09258 63 DGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMIELGQ 141 (338)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999987 468888999999999999986789999995 99999999999999999999
Q ss_pred CCeEEEEeeccccCCCCCC-----CCc------chhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCcccc
Q 044359 159 NSLALVLSMEAISSNGYTG-----STK------SMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAY 227 (401)
Q Consensus 159 ~~~vLvv~~e~~s~~~~~~-----~d~------~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 227 (401)
.++||||++|.+|..+++. .+. ...+...+|||||+|+||++.+... ..+++++ ....+++..+
T Consensus 142 ~~~~Lvv~~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~--~~~~~~~---~~~~~~~~~~ 216 (338)
T PRK09258 142 IDYALVVSGESAREIVEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHP--RGHRLLG---GVTRAATEHH 216 (338)
T ss_pred CCEEEEEEecccchhccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCC--Ccceeee---eeeecCCCcc
Confidence 9999999999998866431 111 1112357899999999999865421 1233332 2223333333
Q ss_pred ccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcceEeecCCC
Q 044359 228 SSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEHFCIHAGG 305 (401)
Q Consensus 228 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~~i~Hq~~ 305 (401)
+.+.+. ...+..+.+.+....++. ..+.+.+.+ .++. .+|||+|++||+|
T Consensus 217 ~~~~~~-------~~~~~~~~~~~~~~~~~~------------------~~~~~~~~L~~~g~~---~~did~~i~H~~~ 268 (338)
T PRK09258 217 ELCQGG-------RDGMRTDAVGLLKEGVEL------------------AVDTWEAFLAQLGWA---VEQVDRVICHQVG 268 (338)
T ss_pred cccccC-------ccceEEcHHHHHHHHHHH------------------HHHHHHHHHHHcCCC---HHHCCEEecCCCC
Confidence 221110 112223333333222111 111122222 3555 7899999999999
Q ss_pred hHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeee
Q 044359 306 RAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 306 ~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
+++++.+++.||+|++|+ +.++++||||+++|+|++|++++++|++++||+|++++||+|++++++++||
T Consensus 269 ~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 269 AAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred HHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 999999999999999999 4688999999999999999999999999999999999999999999999997
No 22
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=1.4e-47 Score=374.61 Aligned_cols=320 Identities=19% Similarity=0.197 Sum_probs=242.4
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
.+++|.++|+|+|++. |+|+|+.+..+ .+. +++.+++||++||++.++. +..+|
T Consensus 3 ~~v~I~~~~~~lP~~~--v~~~~l~~~~g----~~~------~~~~~~~Gi~~r~~~~~~~--------------~~~~l 56 (339)
T PRK06840 3 MNVGIVGTGVYLPKDV--MTAEEIAEKTG----IPE------EVVIEKFGIYEKPVPGPED--------------HTSDM 56 (339)
T ss_pred CceEEEEEEEeCCCcc--cCHHHHHHHhC----CCH------HHHhhhcCcceEeeCCCCC--------------CHHHH
Confidence 3789999999999997 99999998754 222 4567889999999987632 25799
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeee--cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc-CC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCS--IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV-HK 158 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~--~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~-g~ 158 (401)
+.+|+++||+++|++++|||+||++++ +++..|+.+.+|+++||++ ++++++++ ++|+|++.||++|.+++++ +.
T Consensus 57 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~g~ 134 (339)
T PRK06840 57 AIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSDPS 134 (339)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999998753 5777899999999999997 68999999 5999999999999999999 77
Q ss_pred CCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCC
Q 044359 159 NSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDG 238 (401)
Q Consensus 159 ~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (401)
.+++|||++|..+..++++ ++... ..++|||||+|+||+++++.. + ++.+.+.+++++++.+..+.++..
T Consensus 135 ~~~~Lvv~~~~~s~~~~~~-~~~~~-~~~~~GDgAaA~ll~~~~~~~-----~---il~~~~~t~~~~~~~~~~~~~g~~ 204 (339)
T PRK06840 135 IENVLLVGGYRNSDLVDYD-NPRTR-FMFNFAAGGSAALLKKDAGKN-----R---ILGSAIITDGSFSEDVRVPAGGTK 204 (339)
T ss_pred ccEEEEEeecccccccCcC-CCCee-eeccCCCceeEEEEEecCCCC-----c---eEEEEEEEcCCccceEEecCCCcC
Confidence 8999999999998877652 33210 013489999999999876532 2 234445566666655443322111
Q ss_pred Ce-e--------eEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcceEeecCCChH
Q 044359 239 NV-G--------VSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEHFCIHAGGRA 307 (401)
Q Consensus 239 ~~-~--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~~i~Hq~~~~ 307 (401)
.. . ..+....+... +..+... . .....+.+.+.| .++. .+|||+|++||.|++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--------~-~~~~~~~i~~~L~~~gl~---~~did~~~~h~~~~~ 268 (339)
T PRK06840 205 QPASPETVENRQHYLDVIDPESM----KERLDEV--------S-IPNFLKVIREALRKSGYT---PKDIDYLAILHMKRS 268 (339)
T ss_pred CCCcccccccccceEEEcCcHHH----HHHhHhh--------H-HHHHHHHHHHHHHHcCCC---HHHCCEEEECCcCHH
Confidence 00 0 00000001111 1000000 0 000112233333 3565 799999999999999
Q ss_pred HHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeee
Q 044359 308 IIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCV 379 (401)
Q Consensus 308 ~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~ 379 (401)
+++.+++.||+|++|+ . ++++||||+|||+|++|++++++|++++||+++|++||+|++|+++++||+
T Consensus 269 ~~~~~~~~Lgl~~~~~---~-~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 269 AHIALLEGLGLTEEQA---I-YLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred HHHHHHHHcCCCHHHe---E-eHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 9999999999999998 2 689999999999999999999999999999999999999999999999995
No 23
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=1e-47 Score=372.51 Aligned_cols=307 Identities=21% Similarity=0.301 Sum_probs=242.0
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
+++|.++|+|+|+++ ++++|+.+.++ .+. +++.+++||++||++.++. ++.+|+
T Consensus 1 ~~~I~~i~~~lP~~~--~~~~~~~~~~~----~~~------~~~~~~~Gi~~r~~~~~~~--------------~~~~la 54 (320)
T cd00830 1 NARILGIGSYLPERV--VTNDELEKRLD----TSD------EWIRTRTGIRERRIADPGE--------------TTSDLA 54 (320)
T ss_pred CCEEEEEEEECCCcE--EcHHHHHHHcC----CCH------HHhhhccCceEEeeCCCCC--------------CHHHHH
Confidence 589999999999997 99999999763 222 4678899999999987642 257999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
.+|+++||+++|+++++||.||++++ +++..|+.+.+++++||++ ++++++++ ++|++++.||.+|.+++++|+.++
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 132 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAKN 132 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999874 5666899999999999998 79999999 599999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCC--
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGN-- 239 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~-- 239 (401)
||||++|.++..+++ .++. ..++|||||+|+||++.+.. ++++ .+...+++..++.+..+..+...
T Consensus 133 vLvv~~e~~s~~~~~-~~~~---~~~~~GDgAaA~ll~~~~~~-----~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (320)
T cd00830 133 VLVVGAETLSRILDW-TDRS---TAVLFGDGAGAVVLEATEED-----PGIL---DSVLGSDGSGADLLTIPAGGSRSPF 200 (320)
T ss_pred EEEEEehhhccccCc-ccCC---ceEEEeccceEEEEEecCCC-----CcEE---EEEEEEcCCCCCeEEeCCCCcCCcc
Confidence 999999999987764 3333 46899999999999997652 2232 33444555556555443221100
Q ss_pred -------eeeEe-ccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcceEeecCCChHHH
Q 044359 240 -------VGVSI-SRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEHFCIHAGGRAII 309 (401)
Q Consensus 240 -------~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~~i~Hq~~~~~~ 309 (401)
..+.. .+.++....+.+ .+.+.+.+ .++. ++|||+|++||+|++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~i~~~l~~~g~~---~~di~~~~~h~~~~~~~ 256 (320)
T cd00830 201 EDAEGGDPYLVMDGREVFKFAVRLM---------------------PESIEEALEKAGLT---PDDIDWFVPHQANLRII 256 (320)
T ss_pred ccccccCccEEEcChHHHHHHHHhh---------------------HHHHHHHHHHcCCC---HHHCCEEEECCCCHHHH
Confidence 00000 111111100000 11122222 3555 79999999999999999
Q ss_pred HHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceee
Q 044359 310 DAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVW 376 (401)
Q Consensus 310 ~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l 376 (401)
+.+.+.||+|++|+ ..++++|||+++||+|++|++++++|++++||+++++++|+|++|+++++
T Consensus 257 ~~~~~~lgl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 257 EAVAKRLGLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred HHHHHHhCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 99999999999999 57999999999999999999999999999999999999999999999875
No 24
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=6.3e-47 Score=366.81 Aligned_cols=311 Identities=20% Similarity=0.289 Sum_probs=242.0
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
.+.|.++|+|+|++. ++++|+.+.++. +. .++.+++||++||+..++. ++.+|+
T Consensus 2 ~~~I~~i~~~~P~~~--~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~--------------~~~~la 55 (318)
T TIGR00747 2 YAGILGTGSYLPEKV--LTNADLEKMVDT----SD------EWIVTRTGIKERRIAADDE--------------TSSTMG 55 (318)
T ss_pred CCEEEEEEEECCCce--ecHHHHHHhcCC----ch------HHeecccCceEEEECCCCC--------------CHHHHH
Confidence 578999999999997 999999987542 11 3577889999999876643 257999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
.+|+++||+++|+++++||.||++++ +++..|+.+.++++.||++ ++++++++ ++|++++.||++|.++|++|..++
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 133 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYKT 133 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999874 6777899999999999998 58999998 699999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCC---
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDG--- 238 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g--- 238 (401)
+||+++|.++..+++ .++. ...+|||||+|+||++.+... ++ ..+.+.+++.+++.+..+.+...
T Consensus 134 ~Lvv~~e~~~~~~~~-~~~~---~~~~~GDGAaA~lL~~~~~~~-----~i---~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (318)
T TIGR00747 134 VLVVGAEKLSSTLDW-TDRG---TCVLFGDGAGAVVLGESEDPG-----GI---ISTHLGADGTQGEALYLPAGGRPTSG 201 (318)
T ss_pred EEEEEehhhcCcCCc-CCCC---eEEEEecceeEEEEeecCCCC-----cE---EEEEEEEcCCCcceEEECCCCcCCCC
Confidence 999999999877765 3443 457899999999999977542 12 22333445555554433321110
Q ss_pred CeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcceEeecCCChHHHHHHHHHc
Q 044359 239 NVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEHFCIHAGGRAIIDAVEENL 316 (401)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~~i~Hq~~~~~~~~~~~~l 316 (401)
..++. ....+... +..++. ....+.+.+ .++. ++||++|++||+++++++.+++.|
T Consensus 202 ~~~~~-~~~~~~~~----~~~~~~--------------~~~~~~~~l~~~g~~---~~di~~~~~h~~~~~~~~~~~~~l 259 (318)
T TIGR00747 202 PSPFI-TMEGNEVF----KHAVRK--------------MGDVVEETLEANGLD---PEDIDWFVPHQANLRIIEALAKRL 259 (318)
T ss_pred CCCce-EECCHHHH----HHHHHH--------------HHHHHHHHHHHcCCC---HHHCCEEEECCCCHHHHHHHHHHc
Confidence 00110 00011111 111110 001111222 3554 799999999999999999999999
Q ss_pred CCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeee
Q 044359 317 KLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 317 gi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
|+|++|+ ..++++|||+++||+|++|++++++|++++||+|+++++|+|++|+++++||
T Consensus 260 gi~~~k~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 260 ELDMSQV---VKTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred CCCHHHe---eehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 9999999 4789999999999999999999999999999999999999999999999997
No 25
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=7.9e-46 Score=359.24 Aligned_cols=314 Identities=20% Similarity=0.291 Sum_probs=241.6
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEE 80 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~ 80 (401)
+..|+|.++|+|+|+++ ++++|+.+..+. ++ +++.+++||++|+++.++. +..+
T Consensus 1 ~~~v~I~ai~~~lP~~~--~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~--------------~~~~ 54 (319)
T PRK09352 1 MMYAKILGTGSYLPERV--VTNDDLEKMVDT----SD------EWIVTRTGIKERRIAAPDE--------------TTSD 54 (319)
T ss_pred CCceEEEEEEEECCCeE--EcHHHHHHHcCC----CH------HHhhhhcCeEEEEeCCCCC--------------CHHH
Confidence 45789999999999997 999999997542 12 3577889999998876532 2579
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKN 159 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~ 159 (401)
|+.+|++++|+++|+++++||.||++++ ++...|+.+..|+.+||+. ++++++++ ++|++++.||..|.++|++|..
T Consensus 55 la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~ 132 (319)
T PRK09352 55 LATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAY 132 (319)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999874 5666888999999999996 78999999 5999999999999999999999
Q ss_pred CeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCC
Q 044359 160 SLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGN 239 (401)
Q Consensus 160 ~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 239 (401)
++|||+++|.+|..+++ .++. ...+|||||+|+||++++.+ .++ ...+.+++++++.+..+.++...
T Consensus 133 ~~vLvv~~e~~s~~~~~-~~~~---~~~~~gDGaaA~ll~~~~~~------~~~---~~~~~~~~~~~~~~~~~~~~~~~ 199 (319)
T PRK09352 133 KNVLVIGAEKLSRIVDW-TDRS---TCVLFGDGAGAVVLGASEEP------GIL---STHLGSDGSYGDLLYLPGGGSRG 199 (319)
T ss_pred CEEEEEEehhhccccCc-ccCC---ceEEEeccceEEEEEEcCCC------CeE---EEEEEEcCCCCCeEEeCCCCCCC
Confidence 99999999999887655 3333 35799999999999997653 111 22333444444433333211100
Q ss_pred e-ee-EeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcceEeecCCChHHHHHHHHH
Q 044359 240 V-GV-SISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEHFCIHAGGRAIIDAVEEN 315 (401)
Q Consensus 240 ~-~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~~i~Hq~~~~~~~~~~~~ 315 (401)
. .. .+..+.... ++..... ..+.+.+.+ .++. ++||++|++||+|+++++.+++.
T Consensus 200 ~~~~~~~~~~~~~~----~~~~~~~--------------~~~~i~~~l~~~g~~---~~di~~~~~h~~~~~~~~~~~~~ 258 (319)
T PRK09352 200 PASPGYLRMEGREV----FKFAVRE--------------LAKVAREALEAAGLT---PEDIDWLVPHQANLRIIDATAKK 258 (319)
T ss_pred CCCCCceEECCHHH----HHHHHHH--------------HHHHHHHHHHHcCCC---HHHCCEEEECCCCHHHHHHHHHH
Confidence 0 00 000000011 0000000 011122222 3555 79999999999999999999999
Q ss_pred cCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeee
Q 044359 316 LKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCV 379 (401)
Q Consensus 316 lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~ 379 (401)
||+|++++ ..++++|||+++||+|++|++++++|++++||++++++||+|++|+++++||+
T Consensus 259 lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 259 LGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred hCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEeC
Confidence 99999998 57899999999999999999999999999999999999999999999999985
No 26
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=5.7e-46 Score=367.51 Aligned_cols=341 Identities=17% Similarity=0.182 Sum_probs=241.1
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
+++|.|+|+|+|++. |+|+|+.+.++....... ...+|+++++||++||++.++.. .++. +..+|+
T Consensus 2 ~v~I~gig~~lP~~~--v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~~--~~~~-------~~~~La 67 (378)
T PRK06816 2 NVYITSTGAFLPGEP--VSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPEG--RPTH-------SNAQMA 67 (378)
T ss_pred CeEEEeeeecCCCCc--cCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCCC--CCCC-------CHHHHH
Confidence 589999999999997 999999998765421111 12358999999999998765321 0111 257999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
.+|+++||+++|++++|||+||+++ ++++..|+.+..|+++||++ ++++++++ .+|+|++.||++|..++++|..++
T Consensus 68 ~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~~ 145 (378)
T PRK06816 68 AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESRN 145 (378)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 9999999999999999999999987 46677899899999999998 58999998 599999999999999999999999
Q ss_pred EEEEeeccccCCCCCCC--C---------cc------hhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCc
Q 044359 162 ALVLSMEAISSNGYTGS--T---------KS------MLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDD 224 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~--d---------~~------~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~ 224 (401)
||||++|.+|..+++.. + +. .-...++|||||+|+||++.+.... ..+.+. .....+.+
T Consensus 146 vLvv~~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g-~~l~~~---~~~~~~~~ 221 (378)
T PRK06816 146 AVATASELASRWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDG-LSLRID---WIDLRSYA 221 (378)
T ss_pred EEEEeEccchhhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCC-ceEEEE---EEeeeccc
Confidence 99999999998876411 0 00 0001347999999999998664311 012111 11111121
Q ss_pred cccccccccccC---CC-CeeeEe-ccCchHHHHH-HHHHHHHhhCCCCCchhHHHHHH----HHHHhhhc--cCCCcch
Q 044359 225 QAYSSVFQQQDK---DG-NVGVSI-SRSLLPVAAR-ALRINISQLGPHVLPYSEQLKYL----WSVVCKKS--KTYVPNF 292 (401)
Q Consensus 225 ~~~~~~~~~~~~---~g-~~~~~l-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l--~~l~~~~ 292 (401)
..++.+....+. .+ ..++.. ..+.+...+. .++ ++....+... ...+.+.+ .++.
T Consensus 222 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~i~~~L~~~gl~--- 288 (378)
T PRK06816 222 GELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLK----------QDVRLLNENIVVYTIKPLLELVDKRNLD--- 288 (378)
T ss_pred ccCccceecCCccCCCCCccCcccCCHHHHHhccCchHH----------hHHHHHHHHhHHHHHHHHHHHHHHcCCC---
Confidence 122222111000 00 000000 0000000000 000 0111111111 23333444 3565
Q ss_pred hhhcceEeecCCChHHHHHHHHHc-----CCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeecc
Q 044359 293 KKAFEHFCIHAGGRAIIDAVEENL-----KLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGS 367 (401)
Q Consensus 293 ~~did~~i~Hq~~~~~~~~~~~~l-----gi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~ 367 (401)
.+|||+|++||+|.++++.+.++| |+|++|+ +.++++||||+|||+|++|++++++|++++||+|++++.|+
T Consensus 289 ~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 289 PDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred hhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEecc
Confidence 899999999999999999999987 9999998 57999999999999999999999999999999999998776
Q ss_pred c-hhhcceeeeee
Q 044359 368 G-FKVNSAVWKCV 379 (401)
Q Consensus 368 G-~s~~~~~l~~~ 379 (401)
| ++++.++++|+
T Consensus 366 ~~~~~~~~~~~~~ 378 (378)
T PRK06816 366 GRFSTAFMLLTVV 378 (378)
T ss_pred cchhheeEEEEEC
Confidence 6 99999999984
No 27
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-45 Score=361.57 Aligned_cols=309 Identities=17% Similarity=0.226 Sum_probs=233.6
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
+++|.++|+|+|++. |+|+|+.+.++ .++ +++.+++||++||++.++. +..+|+
T Consensus 2 ~v~I~~~g~ylP~~~--v~~~el~~~~~----~~~------~~i~~~~Gi~~R~~~~~~~--------------~~~~la 55 (347)
T PRK04262 2 MVGIVGYGAYIPRYR--IKVEEIARVWG----DDP------EAIKRGLGVEEKSVPGPDE--------------DTATIA 55 (347)
T ss_pred ceeEEEEEEeCCCEE--ecHHHHHHHhC----cCH------HHHhhccCeeeeecCCCCc--------------CHHHHH
Confidence 689999999999997 99999998764 222 5788999999999986643 257999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
.+|+++||+++|++++|||+||++|+ +++..|+.+.+++++||+++++++++++ .+|+|++.||+.|.+++++|..++
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~~~ 134 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMIKY 134 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998874 6777899999999999997668899999 599999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCC-CCe
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKD-GNV 240 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ 240 (401)
||||++|... .++ .++. ..+|||||+|+||++++. .+++++.. ...+++. + .+...+.. ...
T Consensus 135 aLVv~~e~~~--~~~-~~~~----~~~~GDGA~A~ll~~~~~-----~~~i~~~~--~~~~d~~--d-~~~~~~~~~~~~ 197 (347)
T PRK04262 135 ALAIGADTAQ--GAP-GDAL----EYTAAAGGAAFIIGKEEV-----IAEIEATY--SYTTDTP--D-FWRREGEPYPRH 197 (347)
T ss_pred EEEEEEeeec--cCC-CCCC----CCcCCCCcEEEEEecCcc-----cceeeccc--cccccch--h-hcCCCCCcCCCc
Confidence 9999999842 222 2222 256899999999997542 13333211 1122221 1 11111100 000
Q ss_pred eeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcceEeecCCChHHHHHHHHHcCC
Q 044359 241 GVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKL 318 (401)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi 318 (401)
+..+..+ +... +.....+.+.+ .++. .+|||+|++||+|.++++.+.+.||+
T Consensus 198 ~~~~~~~-~~~~----------------------~~~~~~i~~~L~~~gl~---~~dId~~v~Hq~n~~~~~~~~~~Lgl 251 (347)
T PRK04262 198 GGRFTGE-PAYF----------------------KHIISAAKGLMEKLGLK---PSDYDYAVFHQPNGKFPLRVAKMLGF 251 (347)
T ss_pred Cceecch-HHHH----------------------HHHHHHHHHHHHHhCcC---HHHhceeecCCCchHHHHHHHHHcCC
Confidence 1111110 1111 01111122222 2555 79999999999999999999999999
Q ss_pred CchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccCCc
Q 044359 319 SKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDP 384 (401)
Q Consensus 319 ~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~ 384 (401)
|++|+..+. ++++||||+|||+|++|+++++ ++++||+|+|++||+|++++++++||++....
T Consensus 252 ~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~~ 314 (347)
T PRK04262 252 TKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIEE 314 (347)
T ss_pred CHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHHH
Confidence 999995322 5899999999999999999987 48999999999999999999999999876655
No 28
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=1.8e-45 Score=359.55 Aligned_cols=307 Identities=15% Similarity=0.194 Sum_probs=232.4
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
++.|.|+|+|+|+++ |+|+|+.+.++. ++ +++.+++||++|+++.+++ ++.+|+
T Consensus 1 ~~~I~g~g~~lP~~~--v~n~~l~~~~~~----~~------~~i~~~~Gi~~r~v~~~~~--------------~~~~la 54 (345)
T TIGR00748 1 MAGIVGYGAYIPMYR--IKVEEIARVWGK----DP------ESISNGLPVEEKAVPGLDE--------------DTATIG 54 (345)
T ss_pred CccEEEEEEeCCCee--ecHHHHHHHhCC----CH------hHeeeccceeeeecCCCCC--------------CHHHHH
Confidence 468999999999997 999999987542 22 4677899999999987643 257999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
++|+++||+++|++++|||+||+++ ++++..|..+..+++.||++++++++|+++ +|+|++.||++|.++|++|..++
T Consensus 55 ~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~-aC~g~~~al~~A~~~i~sg~~~~ 133 (345)
T TIGR00748 55 VEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEF-ACKAGTAGIQACMGLVASGMIKY 133 (345)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHH-hHHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999987 467777889999999999976789999995 99999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCC-CCe
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKD-GNV 240 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ 240 (401)
||||++|.++.. + .+.. ..+|||||+|+||++.+.. .++.+. ..+.+++.. ++...+.. ...
T Consensus 134 vLVv~~d~~~~~--~-~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~--~~~~~d~~~---~~~~~~~~~~~~ 196 (345)
T TIGR00748 134 GLAIGADTAQGA--P-GDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGT--YSYTTDTPD---FWRREGEPYPRH 196 (345)
T ss_pred EEEEEEeecccC--C-CccC----cccCCCceEEEEEccCCcc-----eEeecc--cceeccccc---ccccCCCcCCCc
Confidence 999999998632 2 2332 3678999999999975532 122111 112222210 11110000 000
Q ss_pred eeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcceEeecCCChHHHHHHHHHcCC
Q 044359 241 GVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKL 318 (401)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi 318 (401)
+..... .+ +.++++...+.+.+ .++. .+|||+|++||+|.++++.+.+.||+
T Consensus 197 ~~~~~~-~~----------------------~~~~~~~~~~~~~L~~~gl~---~~did~~i~Hq~~~~~~~~~~~~lgl 250 (345)
T TIGR00748 197 GGRFTG-EP----------------------AYFHHVVTAAKGLMEKLGLT---PEDFDYAVFHQPNGKFYLVAARMLGF 250 (345)
T ss_pred CCeecC-hH----------------------HHHHHHHHHHHHHHHHcCCC---HHHcCEEEeCCCChHHHHHHHHHcCC
Confidence 000000 00 11222223333333 3565 79999999999999999999999999
Q ss_pred CchhhhhhHHH--HhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccCCc
Q 044359 319 SKEDGEASRMT--LYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDP 384 (401)
Q Consensus 319 ~~e~~~~s~~~--~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~ 384 (401)
|++|+. .+ .++||||+|||+|++|+++++ ++++||+|+|++||+|++|+++++||++....
T Consensus 251 ~~ek~~---~~~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~ 313 (345)
T TIGR00748 251 PKEQVK---PGLLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEE 313 (345)
T ss_pred CHHHee---ccccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHH
Confidence 999994 43 489999999999999999986 68999999999999999999999999865554
No 29
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.2e-44 Score=357.85 Aligned_cols=340 Identities=15% Similarity=0.217 Sum_probs=236.2
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcC-CCChh---hH----------HHHHHHHHHcCCCCceecCCC--cc--C
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSN-VFDKE---SL----------DFQEKVLEKSGIGDESCIPLN--LH--E 64 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~-~~~~~---~~----------~~~~~i~~~~GI~~R~~~~~~--~~--~ 64 (401)
+++|.|+|+|+|++. |+|+|+.+.++... +++.+ ++ ...++|++++||++||++.++ .. +
T Consensus 2 ~~~I~~~g~~lP~~~--v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~ 79 (372)
T PRK07515 2 NVVISGTGLYTPPES--ISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDR 79 (372)
T ss_pred CcEEEEEEeecCCcc--ccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccc
Confidence 689999999999997 99999999864210 11100 00 014678899999999987531 00 0
Q ss_pred CCC--CCChHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccch
Q 044359 65 MQP--DVSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCS 141 (401)
Q Consensus 65 ~~~--~~~l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~ 141 (401)
.++ +.........+.+|+.+|+++||+++|+++++||.||++++ +++..|+.+..+++.||++ .++++++ ++|+
T Consensus 80 ~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aCa 156 (372)
T PRK07515 80 MRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VACS 156 (372)
T ss_pred cCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chhH
Confidence 000 00000111245789999999999999999999999998874 5677899999999999995 5899999 6999
Q ss_pred hHHHHHHHHHHHHHcCCCCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeeccc
Q 044359 142 AGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMG 221 (401)
Q Consensus 142 ~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~ 221 (401)
|++.||..|.++|++|..++||||++|.+|..+++ .++. +.++|||||+|+||++.+....++.+++++. ...
T Consensus 157 sg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~-~d~~---~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~---~~~ 229 (372)
T PRK07515 157 SATFGIQTAANAIRSGSARRVLVVNPEICSGHLNF-RDRD---SHFIFGDVATAVIVERADTATSAGGFEILGT---RLF 229 (372)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeeecccccccc-cCCC---CCEEecCccEEEEEeeccccccCCCceEEEE---Eee
Confidence 99999999999999999999999999999987765 4554 4689999999999998654321123444432 221
Q ss_pred CCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHH----HHhhhc--cCCCcchhhh
Q 044359 222 YDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWS----VVCKKS--KTYVPNFKKA 295 (401)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l--~~l~~~~~~d 295 (401)
++ +.+.+..+. +... +...+.+.... ..+.+++...+++... .+.+.| .++. ++|
T Consensus 230 ~~--~~~~~~~~~-G~~~---~~~~~~~~~~~----------~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~---~~d 290 (372)
T PRK07515 230 TQ--FSNNIRNNF-GFLN---RADPEGIGARD----------KLFVQEGRKVFKEVCPMVAEHIVEHLAENGLT---PAD 290 (372)
T ss_pred cc--cccceecCC-CCCC---CCCcccccccc----------ceEEeccHHHHHHHHHHHHHHHHHHHHHcCCC---HHH
Confidence 11 111111100 0000 00000000000 0000111122222222 223333 3565 899
Q ss_pred cceEeecCCChHHHHHHHHH-cCC--CchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhc
Q 044359 296 FEHFCIHAGGRAIIDAVEEN-LKL--SKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVN 372 (401)
Q Consensus 296 id~~i~Hq~~~~~~~~~~~~-lgi--~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~ 372 (401)
||+|++||+|.++++.+.+. ||+ ++++. +.++++||||+|||+|++|+++. +++++||+|+|++||+|++|+
T Consensus 291 Id~~~~Hq~~~~~~d~~~~~llg~~~~~~~~---~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~ 365 (372)
T PRK07515 291 VKRFWLHQANINMNQLIGKKVLGRDATPEEA---PVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIG 365 (372)
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCCChhhc---eEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHH
Confidence 99999999999999999988 564 45565 57899999999999999999985 468999999999999999999
Q ss_pred ceeeee
Q 044359 373 SAVWKC 378 (401)
Q Consensus 373 ~~~l~~ 378 (401)
+++||.
T Consensus 366 ~~ll~~ 371 (372)
T PRK07515 366 SVIVRK 371 (372)
T ss_pred HHHhcc
Confidence 999985
No 30
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=3.2e-43 Score=325.23 Aligned_cols=282 Identities=57% Similarity=0.943 Sum_probs=267.5
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
++||++..++|.|+..++|+.+++.+++...+.+++++++|+++|++++||.++.+.++.....+++.++..+++++..+
T Consensus 7 r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~~Eae~v 86 (290)
T PF08392_consen 7 RPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAREEAEMV 86 (290)
T ss_pred CCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHHHHHHHH
Confidence 47999999999999999999999999999888899999999999999999999999998888888899999999999999
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
...|++++|+++|++|+|||.||++|+.+.+.|+++++|++++|+++++..+++.||||++++.+|++|+++++..+..+
T Consensus 87 ~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ 166 (290)
T PF08392_consen 87 IFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSY 166 (290)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcE
Confidence 99999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCee
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVG 241 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (401)
||||+.|.+|..++.+++++.++++++|+|||||+||++.+....+++|++.+.+++|.+.++..|.++++.+|+.|..|
T Consensus 167 ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD~~g~~G 246 (290)
T PF08392_consen 167 ALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEEDEEGIVG 246 (290)
T ss_pred EEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEcCCCceE
Confidence 99999999999998999999999999999999999999988766568899999999999989899999999999999999
Q ss_pred eEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhh
Q 044359 242 VSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCK 283 (401)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (401)
+.++++++.+.++.++.++..++|.++|..|.+.++++.+.+
T Consensus 247 v~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~r 288 (290)
T PF08392_consen 247 VSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIAR 288 (290)
T ss_pred EEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999888776554
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=7.5e-42 Score=331.93 Aligned_cols=309 Identities=21% Similarity=0.258 Sum_probs=232.3
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
.++|.++|+|+|+++ |+|+++.+.++. + ++...+||++|++..++. +..+|+
T Consensus 1 ~v~I~~i~~~lP~~~--v~~~~~~~~~~~----~--------~~~~~~gi~~r~~~~~~~--------------~~~~l~ 52 (324)
T cd00827 1 DVGIEAIGAYLPRYR--VDNEELAEGLGV----D--------PGKYTTGIGQRHMAGDDE--------------DVPTMA 52 (324)
T ss_pred CccEEEEEecCCcee--ecHHHHHHHhCC----C--------cceeeeecceeEecCCCC--------------CHHHHH
Confidence 478999999999997 999999987542 1 466789999999986532 257999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
.+|++++|+++|+++++||.||++++ +....|+.+.++++.||++ ++++++++ ++|+|++.||.+|.++|++|..++
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 130 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWRY 130 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999874 5555888999999999998 79999999 599999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCC---
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDG--- 238 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g--- 238 (401)
|||+++|.++...+. ... ..++|||||+|+||++.+... .++++ .++..+++.+++ ...+.-+.+
T Consensus 131 vlvv~~e~~~~~~~~-~~~----~~~~~gdgaaA~ll~~~~~~~---~~~i~---~~~~~~~~~~~~-~~~~~~~~~~~~ 198 (324)
T cd00827 131 ALVVASDIASYLLDE-GSA----LEPTLGDGAAAMLVSRNPGIL---AAGIV---STHSTSDPGYDF-SPYPVMDGGYPK 198 (324)
T ss_pred EEEEEEHHhhhcccC-CCC----ccccccCceEEEEEecCcccc---cCCce---eeeeeccccccc-CccceeccCCCc
Confidence 999999999877642 222 468999999999999877520 12222 333444443322 000000000
Q ss_pred ------CeeeEecc---CchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCCh-HH
Q 044359 239 ------NVGVSISR---SLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGR-AI 308 (401)
Q Consensus 239 ------~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~-~~ 308 (401)
...+.... +++....+. ....+.+.+.... .. +||++|++||+|+ .+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~l~~~~-~~-~~i~~~~~h~~~~~~~ 255 (324)
T cd00827 199 PCKLAYAIRLTAEPAGRAVFEAAHKL---------------------IAKVVRKALDRAG-LS-EDIDYFVPHQPNGKKI 255 (324)
T ss_pred chhhhhhcceeecCCccchHHHHhHH---------------------HHHHHHHHHHHcc-cc-cccceeeccCchHHHH
Confidence 00111111 111111110 1111222221111 12 6899999999999 99
Q ss_pred HHHHHHHcCCCchhhhhhHH-HHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceee
Q 044359 309 IDAVEENLKLSKEDGEASRM-TLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVW 376 (401)
Q Consensus 309 ~~~~~~~lgi~~e~~~~s~~-~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l 376 (401)
++.+.+.|+++++++..++. ++++|||+++||+|++|+++++++++++||+|+++++|+|++|+++++
T Consensus 256 ~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 256 LEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred HHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 99999999999999975443 899999999999999999999999999999999999999999998764
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=2.3e-38 Score=312.90 Aligned_cols=308 Identities=14% Similarity=0.204 Sum_probs=221.5
Q ss_pred eEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHHH
Q 044359 4 VYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVLC 83 (401)
Q Consensus 4 v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la~ 83 (401)
|.|.++|.|+|++. |+++|+.+..+ .++ +++...+|+++|++..+++ ++.+|+.
T Consensus 1 iGI~~i~~y~P~~~--v~~~ela~~~g----~~~------~~~~~g~G~~~~~~~~~~e--------------d~~~la~ 54 (379)
T TIGR01835 1 IGIDKISFFTPQNY--LDMTALAEARG----VDP------EKFHIGIGQKKMAVPPIDE--------------DIVTMAA 54 (379)
T ss_pred CCEeEEEEECCCEE--eeHHHHHHHhC----CCH------HHHHhhcCceEEeeCCCCC--------------CHHHHHH
Confidence 57999999999997 99999998754 233 4677889999998876643 2579999
Q ss_pred HHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeE
Q 044359 84 TIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLA 162 (401)
Q Consensus 84 ~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~v 162 (401)
+|+++||+++ ++++||+||++| ++++..|+.+..|++.||++++++++|+.+ +|+|++.||++|.+++++++.++|
T Consensus 55 ~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~~-aC~gg~~aL~~A~~~i~s~~~~~a 131 (379)
T TIGR01835 55 SAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELKQ-ACYGATAALQMAKGHVALSPDRKV 131 (379)
T ss_pred HHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEecc-ccHHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999998 899999999998 566677999999999999987899999995 999999999999999999999999
Q ss_pred EEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCeee
Q 044359 163 LVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGV 242 (401)
Q Consensus 163 Lvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 242 (401)
|||++|...... .+. ...+|||||+|+||++++.- +.+. . .+...++. ...++++.+ ....
T Consensus 132 LVv~~D~a~~~~---~~~----~~~~~GdGA~A~Ll~~~~~i-----~~~~-~-~~~~~t~~--~~df~~p~~---~~~~ 192 (379)
T TIGR01835 132 LVIASDIAKYGL---ESP----GEPTQGAGAVAMLVSADPKL-----LAIN-E-DSVLYTDD--IMDFWRPNY---STTA 192 (379)
T ss_pred EEEEeehhhccc---CCC----CCccccCccEEEEEecCCCe-----eEEe-c-cceeeecC--CCCccCCCC---CCce
Confidence 999999853321 111 23679999999999976421 1111 0 11122221 112223221 1000
Q ss_pred EeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHH----HHHHHHcCC
Q 044359 243 SISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAII----DAVEENLKL 318 (401)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~----~~~~~~lgi 318 (401)
.... .. ..+.+++. +..+++.+.+. .++. .+|||+|++||++.++. +.+.+.+++
T Consensus 193 ~v~g--~~----s~~~y~~~-----------~~~~~~~~l~~-~g~~---~~did~~i~H~p~~~~~~k~~~~~l~~~~~ 251 (379)
T TIGR01835 193 LVDG--QY----SNEQYLNA-----------FENAWNDYAKR-TGLS---LADFAAFCFHVPFTKMGLKALRHILKKNYE 251 (379)
T ss_pred eECc--HH----HHHHHHHH-----------HHHHHHHHHHH-hCCC---HHHcCEEEECCCCCcHHHHHHHHHHhhccc
Confidence 0111 00 11111111 11111111111 2444 79999999999987773 446667887
Q ss_pred Cc-hhh----hhhHHHHhhhcCcccchHHHHHHHHHHcC-CCCCCCeEEEEeeccchhhcceeeeeec
Q 044359 319 SK-EDG----EASRMTLYRFGNTSSSSYWYELCYLEAKG-KVKKGDRVWQIAFGSGFKVNSAVWKCVS 380 (401)
Q Consensus 319 ~~-e~~----~~s~~~~~~~Gn~~sasi~~~L~~~~~~g-~l~~Gd~vll~~~G~G~s~~~~~l~~~~ 380 (401)
+. +++ ..|+.+.+++|||++||+|++|.++++++ ++++||+|+|+++|+|+......++..+
T Consensus 252 ~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~ 319 (379)
T TIGR01835 252 DEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVA 319 (379)
T ss_pred ccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEcc
Confidence 73 333 23456899999999999999999999986 7899999999999999998888777643
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=1.6e-36 Score=302.01 Aligned_cols=311 Identities=17% Similarity=0.248 Sum_probs=220.5
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
.++.|.++|.|+|++. |+|+|+.+..+. ++ +|+ .+||.+|+++.... . |++.+|
T Consensus 3 ~~vgI~gig~Y~P~~~--v~n~eLa~~~g~----~~------~~~--~~GI~~r~~ava~~----~--------Ed~~tm 56 (459)
T PLN02577 3 KNVGILAMEVYFPPTC--VQQEALEAHDGV----SK------GKY--TIGLGQDCMAFCTD----V--------EDVISM 56 (459)
T ss_pred CccEEEEEEEeCCCeE--EcHHHHHHHhCC----CH------HHH--hhccceeEeccCCC----C--------CCHHHH
Confidence 3689999999999997 999999987642 22 344 58999998753211 1 136899
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHH---HHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMII---NKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVH 157 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~---~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g 157 (401)
|++|++++|+++|++|++||+||++| ++++..|+.+..|+ .+||.+ ++.+||++ .+|+||+.||++|.++|+++
T Consensus 57 A~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~-~AC~G~~~AL~~A~~~i~sg 134 (459)
T PLN02577 57 SLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDST-NACYGGTAALLNCVNWVESS 134 (459)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehh-hhhHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999998 56677999998885 678876 79999999 59999999999999999998
Q ss_pred C--CCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecc-cCCccccccccccc
Q 044359 158 K--NSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHM-GYDDQAYSSVFQQQ 234 (401)
Q Consensus 158 ~--~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~ 234 (401)
. .++||||++|..+...++ . ..++||||+|+||++++.. .+ .... .+.+....++++|.
T Consensus 135 ~~~~~~aLVV~aD~a~~~~~~--~------e~t~GdGA~A~lv~~~~~~----~l------~~~~~g~~~~~~~Df~rP~ 196 (459)
T PLN02577 135 SWDGRYGLVVAADSAVYAEGP--A------RPTGGAGAVAMLVGPNAPI----VF------ESKYRGSHMAHVYDFYKPD 196 (459)
T ss_pred CCCCCeEEEEEechhhccCCC--C------CCCCCcceEEEEEccCCCc----ee------ecccccccCcccchhcccC
Confidence 6 599999999997765542 1 2356999999999975421 11 1111 12222223344443
Q ss_pred cCCCCeeeEeccCchHHHHH-HHHHHHHhhCCCCCchhHHHHHHHHHHhhhc-----cCCCcchhhhcceEeecCCChHH
Q 044359 235 DKDGNVGVSISRSLLPVAAR-ALRINISQLGPHVLPYSEQLKYLWSVVCKKS-----KTYVPNFKKAFEHFCIHAGGRAI 308 (401)
Q Consensus 235 ~~~g~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~l~~~~~~did~~i~Hq~~~~~ 308 (401)
... +.|.+.++ .++.+++.+ ..+.+.+.+.. +++. .+|+|++++||+..++
T Consensus 197 ~~~---------~~~~vdG~~s~~~yl~~~-----------~~~~~~~~~k~~~~~~~g~~---~~d~d~~vfHqP~~km 253 (459)
T PLN02577 197 LAS---------EYPVVDGKLSQTCYLMAL-----------DSCYKRFCEKYEKLEGKQFS---ISDADYFVFHAPYNKL 253 (459)
T ss_pred CCC---------CceEEcchHHHHHHHHHH-----------HHHHHHHHHHhhcccccCCC---HHHcCEEEecCCccch
Confidence 210 01111111 111122211 11111111111 1333 7999999999998888
Q ss_pred HHHHHHHcCCC----------------------------------------------chhhhhhHHHHhhhcCcccchHH
Q 044359 309 IDAVEENLKLS----------------------------------------------KEDGEASRMTLYRFGNTSSSSYW 342 (401)
Q Consensus 309 ~~~~~~~lgi~----------------------------------------------~e~~~~s~~~~~~~Gn~~sasi~ 342 (401)
.....+.|.+. .+|+.+|...-++.||++++|++
T Consensus 254 ~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YTaSly 333 (459)
T PLN02577 254 VQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVGNMYTASLY 333 (459)
T ss_pred hHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcCcccchHHH
Confidence 77655444311 14555566677899999999999
Q ss_pred HHHHHHHHcCC-CCCCCeEEEEeeccchhhcceeeeeecc
Q 044359 343 YELCYLEAKGK-VKKGDRVWQIAFGSGFKVNSAVWKCVSN 381 (401)
Q Consensus 343 ~~L~~~~~~g~-l~~Gd~vll~~~G~G~s~~~~~l~~~~~ 381 (401)
+.|..+++..+ ..+|++|+|+++|+|...+..-+++.+.
T Consensus 334 l~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~~ 373 (459)
T PLN02577 334 AALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHEG 373 (459)
T ss_pred HHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeCC
Confidence 99999997643 4599999999999999999888888764
No 34
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=3e-35 Score=280.03 Aligned_cols=314 Identities=15% Similarity=0.220 Sum_probs=239.2
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
+++.|.++|.|+|... |.++|+.+..+. ++ +++.+.+|+++|.+.+.+ |++..|
T Consensus 1 ~~iGI~~~g~y~p~~~--i~~~ela~~~g~----d~------~k~~~gl~~~e~sv~~~~--------------ED~vTm 54 (377)
T COG3425 1 MMIGIVGIGAYIPRYR--IKLEELARAWGV----DP------EKIKKGLGVEEKSVPPWD--------------EDAVTM 54 (377)
T ss_pred CccccceEEEeccceE--eeHHHHHhhcCC----Ch------HHhhhccccccccCCCCc--------------hhHHHH
Confidence 3688999999999996 999999987542 23 467788999999877653 368999
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNS 160 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~ 160 (401)
+++||+++|+++++||++|+.|+++| |..+...+.+..|++.||+.+++.++|+.+ +|.+++.||++|..++.+++.+
T Consensus 55 aveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~~~ 133 (377)
T COG3425 55 AVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGMIS 133 (377)
T ss_pred HHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999998 656668889999999999999999999995 9999999999999999999999
Q ss_pred eEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccC-CCC
Q 044359 161 LALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDK-DGN 239 (401)
Q Consensus 161 ~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~g~ 239 (401)
++|||++|+.-... + +. .-...|+||+|+||++++... ..+ . .+...+ ....+++++.+. ...
T Consensus 134 ~~LvI~sD~a~~~~--~-~~----~E~t~GAGavA~lIg~n~~~~----a~~-~--~~~syt--~d~~DFwRp~~~~yp~ 197 (377)
T COG3425 134 YGLVIGADTAQYAP--G-DA----LEYTAGAGAVAFLIGKNPPIV----AEF-E--GTGSYT--TDTPDFWRPDGQPYPY 197 (377)
T ss_pred ceEEEeehhhccCC--C-cc----cCccCCCceEEEEEccCCCeE----EEe-c--CceEEe--cCCCcccccCCCcccc
Confidence 99999999853221 1 11 236799999999999974321 111 0 111111 112345555432 011
Q ss_pred eeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHHHHHHcCCC
Q 044359 240 VGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLS 319 (401)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~ 319 (401)
.+-+++ .+... +.+...... +.+. .+++ ++|+|++++||++.++-...++.++.+
T Consensus 198 ~dg~~s--~~~Y~-~~~~~a~~~------------------~~~k-~gls---~~dfdy~vfH~P~~k~~~ka~k~l~~~ 252 (377)
T COG3425 198 VDGRFS--EPAYF-KHVENAAKG------------------YMEK-TGLS---PDDFDYIVFHQPNGKFPKKAAKSLGFK 252 (377)
T ss_pred cCceec--HHHHH-HHHHHHHHH------------------HHHH-hCCC---hhhhCeEEecCCCCchHHHHHHHhCcc
Confidence 111222 11111 111111111 1111 1444 799999999999999999999999999
Q ss_pred chhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccCCc
Q 044359 320 KEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDP 384 (401)
Q Consensus 320 ~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~ 384 (401)
.+++.++....++.||++++|+++.|..+++..+ .+||+|++++||+|....+.-++..+....
T Consensus 253 ~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~~ 316 (377)
T COG3425 253 EEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIEE 316 (377)
T ss_pred HhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHHH
Confidence 9999988888889999999999999999998766 799999999999999888888877776654
No 35
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=4.5e-34 Score=284.05 Aligned_cols=318 Identities=15% Similarity=0.225 Sum_probs=214.9
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCcee--cCCCccCCCCCCChHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESC--IPLNLHEMQPDVSLKRSREETEE 80 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~--~~~~~~~~~~~~~l~~~~~~~~~ 80 (401)
+|.|.++|.|+|++. |+|+|+.+..+ .+. .|+ .+||.+|++ +.+++ ++.+
T Consensus 1 ~vgI~~ig~y~P~~~--v~~~eLa~~~g----~~~------~k~--~~GI~~rr~av~~~~E--------------d~~t 52 (454)
T TIGR01833 1 DVGILALEIYFPSQY--VDQAELEKYDG----VSA------GKY--TIGLGQTKMGFCTDRE--------------DINS 52 (454)
T ss_pred CcEEEEEEEeCCCeE--EcHHHHHHhcC----CCH------HHh--eechhheecccCCCCC--------------CHHH
Confidence 689999999999997 99999998643 222 233 589999985 44322 3689
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHc---CCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKF---GFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~L---Gl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
|+.+|++++|+++++++++||+||++| ++++..|+.+..|++.| |.+ ++.+||+++ +|+|++.||.+|.+++++
T Consensus 53 ma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~~-AC~G~t~AL~~A~~~i~s 130 (454)
T TIGR01833 53 LCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTTN-ACYGGTAALFNAINWIES 130 (454)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEeccc-cchhHHHHHHHHHHHHHc
Confidence 999999999999999999999999998 67888999999999855 555 899999995 999999999999999999
Q ss_pred CC--CCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccc
Q 044359 157 HK--NSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQ 234 (401)
Q Consensus 157 g~--~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
+. .++||||++|+.- + .+.. ...++||||+|+||++++.- .++. ++..++... ...+++|.
T Consensus 131 ~~~~~~~aLVV~sDia~----y-~~~~---~~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~----~~DF~rP~ 193 (454)
T TIGR01833 131 SSWDGRYALVVAGDIAV----Y-AKGN---ARPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQH----AYDFYKPD 193 (454)
T ss_pred CCcCCCeEEEEEecccc----c-cCCC---eeeccccceEEEEeccCccc----eecC-ccceEEEee----cccccCCC
Confidence 85 5999999999931 1 1112 23578999999999987641 1111 011122211 12233332
Q ss_pred cCCCCe--eeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHHH
Q 044359 235 DKDGNV--GVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAV 312 (401)
Q Consensus 235 ~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~~ 312 (401)
.....+ +-.++.+ ..-+.+...+..+ .++...+++.... -.+.. .+|+|++++|++..++....
T Consensus 194 ~~~~~p~vdg~~S~~---~Yl~a~~~~y~~y-------~~~~~~a~~~~~~-~~~~~---~~dfd~~~fH~P~~km~~ka 259 (454)
T TIGR01833 194 LASEYPVVDGKLSIQ---CYLSALDRCYKSY-------CKKIEKQWGKSGG-DRKFT---LNDFDYMVFHSPYCKLVQKS 259 (454)
T ss_pred CCCcccccCCccCHH---HHHHHHHHHHHHH-------HHHHHHhhhhhcc-ccCCC---HhHcCEEeccCCcccHHHHH
Confidence 100000 0001100 0011121111111 1111111110000 01233 78999999999987777653
Q ss_pred -HHHc---------------------------------------------CCCchhhhhhHHHHhhhcCcccchHHHHHH
Q 044359 313 -EENL---------------------------------------------KLSKEDGEASRMTLYRFGNTSSSSYWYELC 346 (401)
Q Consensus 313 -~~~l---------------------------------------------gi~~e~~~~s~~~~~~~Gn~~sasi~~~L~ 346 (401)
...+ +...+|+.+|...-++.||+.++|+++.|.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YtaSlyl~L~ 339 (454)
T TIGR01833 260 LARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTASLYGCLA 339 (454)
T ss_pred HHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhhHHHHHHH
Confidence 2222 111256666666677999999999999999
Q ss_pred HHHHcCC--CCCCCeEEEEeeccchhhcceeeeeecc
Q 044359 347 YLEAKGK--VKKGDRVWQIAFGSGFKVNSAVWKCVSN 381 (401)
Q Consensus 347 ~~~~~g~--l~~Gd~vll~~~G~G~s~~~~~l~~~~~ 381 (401)
.+++..+ ...|++|+|+++|+|...+...+++.+.
T Consensus 340 Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 340 SLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred HHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 9997543 4579999999999999999988888764
No 36
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=100.00 E-value=1.2e-34 Score=261.62 Aligned_cols=199 Identities=21% Similarity=0.329 Sum_probs=160.9
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCCh--hhHHHHHHHHHHcCCCCceecCCCcc--C-----CCCCCC--
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDK--ESLDFQEKVLEKSGIGDESCIPLNLH--E-----MQPDVS-- 70 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~--~~~~~~~~i~~~~GI~~R~~~~~~~~--~-----~~~~~~-- 70 (401)
.+.+|.++|+.+|+.. ++|+|+.+.+.+....+. +..++++++++++||++||.+.+.+. . ...+++
T Consensus 13 g~A~Il~IgTA~P~~~--~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ps~~ 90 (226)
T PF00195_consen 13 GPAYILSIGTAVPPHR--ITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADPSLA 90 (226)
T ss_dssp SSEEEEEEEEE-SSEE--EEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS-HH
T ss_pred CCeEEEEEEEeCCCce--ecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCccHH
Confidence 3689999999999996 999999998654322333 34578889999999999998754211 0 111223
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHH
Q 044359 71 --LKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSIS 148 (401)
Q Consensus 71 --l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~ 148 (401)
++.|.+.+.+|+.+|+++||+++|++++|||+||++|+++...|++..+|.++|||++++..+.|+++||++++.+|.
T Consensus 91 ~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~ 170 (226)
T PF00195_consen 91 ERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLR 170 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHH
Confidence 457889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCeEEEEeeccccCCCCC--CCCcchhhhhhcccccceEEEEecCC
Q 044359 149 LVKDLLKVHKNSLALVLSMEAISSNGYT--GSTKSMLISNTVFRMGGAAILLSNRQ 202 (401)
Q Consensus 149 ~A~~~i~~g~~~~vLvv~~e~~s~~~~~--~~d~~~~i~~~lfGDGAaA~ll~~~~ 202 (401)
.|..+.++++..+||||++|.||.+++. +.+++++++..+|||||+|+||+.+|
T Consensus 171 ~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 171 RAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 9999999999999999999999998864 23467899999999999999998764
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.96 E-value=1.5e-28 Score=230.19 Aligned_cols=235 Identities=17% Similarity=0.150 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|++++|+++|++++|||.||++++ +++..|+.+.+++..+|++ +.++++++ .+|++++.||..|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 5799999999999999999999999999985 5666899999999999997 78999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCcc---ccceEEeeeeeecccCCcccccccccc
Q 044359 157 HKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKH---IAKYKLKHLVRTHMGYDDQAYSSVFQQ 233 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
|..+++||+++|. ++|||||+|+||++.+.... .+.+++.+. ....++..+.
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~---~~~~~~~~~~----- 139 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVST---AATFDGASMV----- 139 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEEE---EEcCCCCCCC-----
Confidence 9999999999997 57999999999998654211 111233321 1111111000
Q ss_pred ccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHHHH
Q 044359 234 QDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVE 313 (401)
Q Consensus 234 ~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~~~ 313 (401)
+ ...+....+.++..+++ .++. ++|||+|++|+.+..+++.++
T Consensus 140 --------~---~~~~~~~~~~i~~~l~~-----------------------ag~~---~~did~~~~h~~~~~~~~~~~ 182 (254)
T cd00327 140 --------P---AVSGEGLARAARKALEG-----------------------AGLT---PSDIDYVEAHGTGTPIGDAVE 182 (254)
T ss_pred --------C---CCChHHHHHHHHHHHHH-----------------------cCCC---HHHCCEEEccCCcCccccHHH
Confidence 0 00111111222221111 2444 789999999999999999999
Q ss_pred HHcCCCchhhh--hhHHHHhhhcCcccchHHHHHHHHHHcCCCC-------CCCeEEEEeeccchhhcceee
Q 044359 314 ENLKLSKEDGE--ASRMTLYRFGNTSSSSYWYELCYLEAKGKVK-------KGDRVWQIAFGSGFKVNSAVW 376 (401)
Q Consensus 314 ~~lgi~~e~~~--~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~-------~Gd~vll~~~G~G~s~~~~~l 376 (401)
+.+++++++.. +...+..+|||+++||.++.|.++++..+.+ +|++++++++|+|++++++++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 183 LALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred HHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 99999887763 1236789999999999999999998765555 899999999999999999875
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.94 E-value=3.2e-26 Score=222.89 Aligned_cols=252 Identities=16% Similarity=0.097 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHHHHhCCCC----cCCcCEEEEeee-cCCC---------------------CCcHHHHHHHHcCCCCCcc
Q 044359 78 TEEVLCTIVKDLLSKHKIN----PKSIDILVTNCS-IFCP---------------------TPSISSMIINKFGFRSNIK 131 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~----~~dId~li~~s~-~~~~---------------------~p~~a~~l~~~LGl~~~~~ 131 (401)
..+|+.+|+++||+++|++ +++||.||++++ +.+. .|+.+.+++..||+ +.+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGI--HGP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCC--CCC
Confidence 4689999999999999999 999999998875 3332 67889999999999 478
Q ss_pred eEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCCCC-----------C---CCcchhhhhhcccccceEEE
Q 044359 132 SINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYT-----------G---STKSMLISNTVFRMGGAAIL 197 (401)
Q Consensus 132 ~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~~~-----------~---~d~~~~i~~~lfGDGAaA~l 197 (401)
++++. .+|++++.||+.|.++|++|..+++||+++|..+..+.. . ...++....++|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 99999 599999999999999999999999999999987654321 0 00011225789999999999
Q ss_pred EecCCCCcc---ccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHH
Q 044359 198 LSNRQQDKH---IAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQL 274 (401)
Q Consensus 198 l~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (401)
|++.+.... ....++.+ .....++.... . ... ......+.++..++ .
T Consensus 168 L~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~~------------~--~~~-~~~~~~~~i~~al~-----------~- 217 (332)
T cd00825 168 VEELEHALARGAHIYAEIVG---TAATIDGAGMG------------A--FAP-SAEGLARAAKEALA-----------V- 217 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEE---EEEccCCCCCC------------C--CCc-CHHHHHHHHHHHHH-----------H-
Confidence 998654210 11122222 11111211100 0 000 00111111111111 1
Q ss_pred HHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHHHHHHcCCCchhh--hhhHHHHhhhcCcccchHHHHHHHHHHcC
Q 044359 275 KYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDG--EASRMTLYRFGNTSSSSYWYELCYLEAKG 352 (401)
Q Consensus 275 ~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~e~~--~~s~~~~~~~Gn~~sasi~~~L~~~~~~g 352 (401)
.++. ++|||++++|+.+.++.+.+++.++++.++. .....+..+|||+++|+.++.|..+++..
T Consensus 218 -----------agl~---~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~ 283 (332)
T cd00825 218 -----------AGLT---VWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLML 283 (332)
T ss_pred -----------cCCC---HhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHH
Confidence 3555 7999999999999999999888887766541 01146789999999999999999998765
Q ss_pred CCC-------------------------CCCeEEEEeeccchhhcceee
Q 044359 353 KVK-------------------------KGDRVWQIAFGSGFKVNSAVW 376 (401)
Q Consensus 353 ~l~-------------------------~Gd~vll~~~G~G~s~~~~~l 376 (401)
+.+ +|++++++++|.|.+++++++
T Consensus 284 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 284 EHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred hcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 544 789999999999999999875
No 39
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.86 E-value=7.1e-22 Score=155.47 Aligned_cols=83 Identities=31% Similarity=0.516 Sum_probs=75.4
Q ss_pred hhhcceEeecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhc
Q 044359 293 KKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVN 372 (401)
Q Consensus 293 ~~did~~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~ 372 (401)
++|||+|++||.|.++++.+++.+|++++++ +.++++|||+++||+|++|++++++|++++||+|+++++|+|++|+
T Consensus 8 ~~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G~~~~ 84 (90)
T PF08541_consen 8 PDDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAGFSWG 84 (90)
T ss_dssp GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETTTEEE
T ss_pred HHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhhheeE
Confidence 7999999999999999999999999999999 5789999999999999999999999999999999999999999999
Q ss_pred ceeeee
Q 044359 373 SAVWKC 378 (401)
Q Consensus 373 ~~~l~~ 378 (401)
++++||
T Consensus 85 ~~~~~~ 90 (90)
T PF08541_consen 85 AAVLRW 90 (90)
T ss_dssp EEEEE-
T ss_pred EEEEEC
Confidence 999997
No 40
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.82 E-value=2.7e-19 Score=167.75 Aligned_cols=316 Identities=19% Similarity=0.270 Sum_probs=208.8
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCc--eecCCCccCCCCCCChHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDE--SCIPLNLHEMQPDVSLKRSREETEE 80 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R--~~~~~~~~~~~~~~~l~~~~~~~~~ 80 (401)
+|.|.++..|+|... |+|+|++.+-+.. . .+. .+|+..- -|+.+ +|++..
T Consensus 11 dvGI~aieiyfP~~y--V~Q~elEk~d~vs----~------gKy--tIGLGq~~Mgfcsd--------------rEDi~S 62 (462)
T KOG1393|consen 11 DVGIIAIEIYFPSQY--VDQEELEKFDGVS----A------GKY--TIGLGQTQMGFCSD--------------REDIIS 62 (462)
T ss_pred ccceeEEEEEcCccc--cChhhHhhcCCcc----c------cce--EeccCcceecccCc--------------hhhhhh
Confidence 789999999999998 9999999763321 0 111 1233333 24433 345778
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcC--CCCCcceEEeecccchhHHHHHHHHHHHHHcC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFG--FRSNIKSINLSGMGCSAGILSISLVKDLLKVH 157 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LG--l~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g 157 (401)
|+..++++++++.+|+++.|+.|-++| +-..-..+.-..+.+.++ -..++..+|..| +|.||.+||-.|.++|++.
T Consensus 63 l~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnWiESs 141 (462)
T KOG1393|consen 63 LSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNWIESS 141 (462)
T ss_pred hhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhhhhhc
Confidence 999999999999999999999999998 433335667777777776 455899999996 9999999999999999998
Q ss_pred C--CCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCcccccccccccc
Q 044359 158 K--NSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQD 235 (401)
Q Consensus 158 ~--~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
. ++.+||||+|.. .+..++- ..+-|-||+|+|++++.+-. |+. ++..+|+.. .| +++.|.
T Consensus 142 sWDGr~aivV~gDIA--vY~~G~a------RpTGGAgAVAmLIgPnApi~----fer-glr~thM~h---ay-DFyKPd- 203 (462)
T KOG1393|consen 142 SWDGRYAIVVCGDIA--VYAKGNA------RPTGGAGAVAMLIGPNAPII----FER-GLRATHMQH---AY-DFYKPD- 203 (462)
T ss_pred ccCCceeEEEEeeEE--EecCCCC------CCCCCcceEEEEEcCCCceE----ecc-cchhhhhhh---hh-hccCCC-
Confidence 5 799999999984 2212222 35679999999999987531 221 233444422 12 233331
Q ss_pred CCCCeeeEeccCchHHHHHH-HHHHHHhhCCCCCchhHHHHHHHHHHhhhc----cCCCcchhhhcceEeecCCChHHHH
Q 044359 236 KDGNVGVSISRSLLPVAARA-LRINISQLGPHVLPYSEQLKYLWSVVCKKS----KTYVPNFKKAFEHFCIHAGGRAIID 310 (401)
Q Consensus 236 ~~g~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~l~~~~~~did~~i~Hq~~~~~~~ 310 (401)
+..+.|-+.++. +.-++.. ++..-....+.+ .+..++..+++|++++|.+--++.+
T Consensus 204 --------l~SEyPvVDGklSi~cYl~A-----------ld~cY~~~~kK~~~~~~~~~~~~l~~fdy~ifHsP~cKlvq 264 (462)
T KOG1393|consen 204 --------LLSEYPVVDGKLSIQCYLSA-----------LDRCYTVYRKKIAAQWQKSGSDNLNSFDYIIFHSPYCKLVQ 264 (462)
T ss_pred --------CCCcCceecCeehHHHHHHH-----------HHHHHHHHHHHHHHHhccccCcccccCCeEEEeCchhhhHH
Confidence 223334333321 1111111 111111111111 0111122568999999998776655
Q ss_pred H-HH-----------------------------------------HHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHH
Q 044359 311 A-VE-----------------------------------------ENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYL 348 (401)
Q Consensus 311 ~-~~-----------------------------------------~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~ 348 (401)
. ++ -...+-.+|+.+|...-++.|||.++|+...|..+
T Consensus 265 Ks~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~sl 344 (462)
T KOG1393|consen 265 KSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYASLASL 344 (462)
T ss_pred HHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHHHHHH
Confidence 4 11 11222333555454445689999999999999999
Q ss_pred HHcC--CCCCCCeEEEEeeccchhhcceeeeeeccCCc
Q 044359 349 EAKG--KVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDP 384 (401)
Q Consensus 349 ~~~g--~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~ 384 (401)
+... .--.|++|.++++|+|++++..-+|+..+..|
T Consensus 345 l~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~p 382 (462)
T KOG1393|consen 345 LSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDATP 382 (462)
T ss_pred HhccchhhhhccEEEEEeecCcchhheEEEEecCCCCc
Confidence 8765 33469999999999999999989998886554
No 41
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.82 E-value=3.7e-19 Score=152.28 Aligned_cols=118 Identities=27% Similarity=0.412 Sum_probs=93.6
Q ss_pred eeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHHHHHHcCCC
Q 044359 240 VGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLS 319 (401)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~ 319 (401)
+.+.+++++|.++++.+..++..+ ++. .++. ..|+.+|++|+++++|++.+++.|+|+
T Consensus 26 f~~~Ls~~vP~~i~~~i~~~~~~~-------L~~------------~g~~---~~~~~~wavHPGG~~ILd~v~~~L~L~ 83 (151)
T PF02797_consen 26 FHFILSKEVPDLISDNIPPFVEDL-------LAR------------HGLS---DWDILFWAVHPGGRKILDAVEEALGLS 83 (151)
T ss_dssp EEEEE-TTHHHHHHHHHHHHHHHH-------HHG------------GTCC---SGGGSEEEEE-SSHHHHHHHHHHHTS-
T ss_pred EEEEEhhHhHHHHHHHHHHHHHHH-------Hhh------------hccc---ccccceeeecCChHHHHHHHHHHcCCC
Confidence 578899999999988877666543 222 1333 235569999999999999999999999
Q ss_pred chhhhhhHHHHhhhcCcccchHHHHHHHHHH----cCCCCC---CCeEEEEeeccchhhcceeeeee
Q 044359 320 KEDGEASRMTLYRFGNTSSSSYWYELCYLEA----KGKVKK---GDRVWQIAFGSGFKVNSAVWKCV 379 (401)
Q Consensus 320 ~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~----~g~l~~---Gd~vll~~~G~G~s~~~~~l~~~ 379 (401)
++++.+|+.++++||||+|++++++|+++++ +|.... ++++++++||||+|.++++||..
T Consensus 84 ~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 84 PEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred HHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 9999999999999999999999999999987 344333 48999999999999999999864
No 42
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.81 E-value=2.5e-18 Score=168.30 Aligned_cols=313 Identities=11% Similarity=0.050 Sum_probs=201.1
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHH-----HHHHHHHcCCCCceecCCCccCCCCCCChHHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDF-----QEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSR 75 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~-----~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~ 75 (401)
+++++|++.|..-|=. .+.++....+. .+-.+.+...+ -+++..++|+.+|++..+
T Consensus 2 ~~~v~I~~~g~vs~lG---~~~~~~~aa~r-agi~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--------------- 62 (348)
T PRK06147 2 MRALAIVGSGMVTAVG---LDAPSSCAAIR-ARLDNFQETRFIDPPGGEWLIGAPVPLPPPWRGP--------------- 62 (348)
T ss_pred CCceEEEecceeecCc---CCHHHHHHHHH-cccccccccccccCCCCCceEeecCcCCcccCch---------------
Confidence 4689999999999988 57777776653 21111111000 134555667766665321
Q ss_pred HHHHHHHHHHHHHHHHhCC-CCcCCcCEEEEeee------cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHH
Q 044359 76 EETEEVLCTIVKDLLSKHK-INPKSIDILVTNCS------IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSIS 148 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag-~~~~dId~li~~s~------~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~ 148 (401)
+...+|+.+|++++|++++ +++++||.+|+.++ ++...+..+..++++||+....++++|+ .+|++++.||.
T Consensus 63 ~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~-~~casg~~Al~ 141 (348)
T PRK06147 63 ERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIA-RGRVSGAVALA 141 (348)
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCccccc-ccchHHHHHHH
Confidence 2357999999999999999 79999999887643 2233455678899999996457789999 49999999999
Q ss_pred HHHHHHHcCCCCeEEEEeeccccCC--CCC--------CCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeee
Q 044359 149 LVKDLLKVHKNSLALVLSMEAISSN--GYT--------GSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRT 218 (401)
Q Consensus 149 ~A~~~i~~g~~~~vLvv~~e~~s~~--~~~--------~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~ 218 (401)
.|..+|++|..+.+||+++|.++.. +.. .++.. ..++|||||+++||++.+.... ..-++.+ ..
T Consensus 142 ~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~---~G~v~GEGA~a~vLe~~~~A~~-rga~i~a-~g- 215 (348)
T PRK06147 142 QARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS---NGFIPGEAAAAVLLGRPAGGEA-PGLPLLG-LG- 215 (348)
T ss_pred HHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCC---CceeeeceEEEEEEccHhhhhc-CCCceEE-EE-
Confidence 9999999999999999999987652 110 01222 4689999999999998654211 1112221 11
Q ss_pred cccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcce
Q 044359 219 HMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEH 298 (401)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~ 298 (401)
+..+...+. ... ..+ .+. .-..+.+++.+++ .++. ++|||+
T Consensus 216 -~~~~~~~~~---~~~------~~p--~~g-~gl~~ai~~AL~~-----------------------agl~---~~dId~ 256 (348)
T PRK06147 216 -LGREPAPVG---ESE------DLP--LRG-DGLTQAIRAALAE-----------------------AGCG---LEDMDY 256 (348)
T ss_pred -EeecCCCcc---cCC------CCC--CCh-HHHHHHHHHHHHH-----------------------cCCC---HHHCCE
Confidence 111110000 000 000 000 0011112211111 2455 789999
Q ss_pred EeecCCChHHHHH-----HHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHH---HHcCCCCCCCeEEEEeeccchh
Q 044359 299 FCIHAGGRAIIDA-----VEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYL---EAKGKVKKGDRVWQIAFGSGFK 370 (401)
Q Consensus 299 ~i~Hq~~~~~~~~-----~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~---~~~g~l~~Gd~vll~~~G~G~s 370 (401)
+..|-.+....+. +.+.++-..+.... +.+-..+||+++|+-++.+... +++| .-+|+++|+++....-.
T Consensus 257 v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~-~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g-~~~g~~~L~~s~~d~g~ 334 (348)
T PRK06147 257 RIADLNGEQYRFKEAALAEMRLFRVRKEFFDL-WHPAECIGEIGAAIGPALLGVALAASRKG-YGPGPNVLCHLSDDDGA 334 (348)
T ss_pred EEcCCCCCccchHHHHHHHHHHhhhccCCCce-ecchHhhcchHHHHHHHHHHHHHHHHHcC-cCCCCcEEEEecCCCCc
Confidence 9999887655432 33345532222211 4567889999999988887754 4444 45799999999998888
Q ss_pred hcceeeeeec
Q 044359 371 VNSAVWKCVS 380 (401)
Q Consensus 371 ~~~~~l~~~~ 380 (401)
.++++++.++
T Consensus 335 r~a~~l~~~~ 344 (348)
T PRK06147 335 RAALVLEYRR 344 (348)
T ss_pred eEEEEEeccc
Confidence 8999999665
No 43
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.81 E-value=1.5e-19 Score=155.67 Aligned_cols=166 Identities=19% Similarity=0.243 Sum_probs=125.1
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
.+|.|.+++.|+|... |+.+|+.++-+ .++ .++....|.+++.+.++.+ ++..|
T Consensus 3 ~~VGI~~i~~y~p~~~--v~~~~La~~~g----~d~------~K~~~glgq~~~av~~~~E--------------D~vTm 56 (174)
T PF01154_consen 3 QNVGIDAIEFYIPRYY--VDQEELAEARG----VDP------GKYTIGLGQEKMAVPPPDE--------------DIVTM 56 (174)
T ss_dssp SSEEEEEEEEE-ESEE--EEHHHHHHHTT----S-T------CHHHTTT--SEEEE--TTS---------------HHHH
T ss_pred ccccEeEEEEecCceE--ecHHHHHHHhC----CCH------HHhhhhcCeeEEEeCCCcc--------------cHHHH
Confidence 4799999999999997 99999998633 222 2455556767776766532 58899
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCC--CCCcceEEeecccchhHHHHHHHHHHHHHcCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGF--RSNIKSINLSGMGCSAGILSISLVKDLLKVHK 158 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl--~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~ 158 (401)
++.|++++|++.++++++|+.|+++| |......+.+.+|++.||+ ..++..+++.+ +|.|++.||+.|.++++++.
T Consensus 57 A~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~-ACygGTaAL~~a~~~v~s~~ 135 (174)
T PF01154_consen 57 AANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQ-ACYGGTAALQNAVNWVASSP 135 (174)
T ss_dssp HHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEES-GGGHHHHHHHHHHHHHCSTT
T ss_pred HHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhh-hhHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999998 5444577899999999999 45678899995 99999999999999999974
Q ss_pred --CCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCC
Q 044359 159 --NSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQ 202 (401)
Q Consensus 159 --~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~ 202 (401)
.+++|||++|...- ..+. .-.+-|-||+|+||+++.
T Consensus 136 ~~g~~aLVVasDiA~y--~~g~------~e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 136 WDGRKALVVASDIARY--DLGS------AEPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp STTEEEEEEEEEEE----STTT------TGGG-EEEEEEEEEECS-
T ss_pred CCCCeEEEEecccccc--CCCC------ccccccceeEEEEecCCC
Confidence 68999999999632 2211 135789999999999864
No 44
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.77 E-value=2.6e-17 Score=154.99 Aligned_cols=117 Identities=15% Similarity=0.204 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcC
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVH 157 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g 157 (401)
..+|+.+|+++||+++|++++|||.+|+++.++ .+..+..+++.||+ +.+++++ +|++++.||.+|..+|++|
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~--Q~~~As~vA~~LGI----P~fdV~~-ACSTf~~AL~lAa~lI~SG 122 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVDFFLAGDLLN--QIITANFVARDLGI----PFLGLYG-ACSTSMETLALGAMLVDGG 122 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC--cccHHHHHHHHhCC----CEEEEec-cCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999999887544 34568899999997 4599995 9999999999999999999
Q ss_pred CCCeEEEEeecccc------CCC-CCC-CCcchhhhhhcccccceEEEEecCCCC
Q 044359 158 KNSLALVLSMEAIS------SNG-YTG-STKSMLISNTVFRMGGAAILLSNRQQD 204 (401)
Q Consensus 158 ~~~~vLvv~~e~~s------~~~-~~~-~d~~~~i~~~lfGDGAaA~ll~~~~~~ 204 (401)
..++|||+++|..| +.. +++ +++. ++.+|||||+|+||++.+..
T Consensus 123 ~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~---ta~~tgdGAGA~vl~~~~~~ 174 (327)
T TIGR02845 123 FADRVLAATSSHYATAERQFRYPTEYGVQKPP---TAQWTVTGAGAVLLASTGGG 174 (327)
T ss_pred CCCEEEEEEecccchhhhhcccccccccCCCC---eeeEEEcccEEEEEeecCCC
Confidence 99999999988877 322 332 3455 78999999999999987643
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.69 E-value=1.2e-15 Score=144.02 Aligned_cols=117 Identities=17% Similarity=0.213 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcC
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVH 157 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g 157 (401)
-.+|+.+|+++||+++|++++|||.+|+++..+ .+..+..+++.||+ +++++++ +|+++..||.+|..+|++|
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID~lI~Gdll~--Q~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG 128 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN--QIISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGG 128 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC--CcchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcC
Confidence 368999999999999999999999999887543 34567899999986 6899995 9999999999999999999
Q ss_pred CCCeEEEEeeccccCC---CCC----C-CCcchhhhhhcccccceEEEEecCCCC
Q 044359 158 KNSLALVLSMEAISSN---GYT----G-STKSMLISNTVFRMGGAAILLSNRQQD 204 (401)
Q Consensus 158 ~~~~vLvv~~e~~s~~---~~~----~-~d~~~~i~~~lfGDGAaA~ll~~~~~~ 204 (401)
..++|||++++..|.. |.+ + +.+. +...++|||+|+||++....
T Consensus 129 ~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~---taqwtvtGAGA~i~~~~~~~ 180 (337)
T PRK08304 129 FADRVLAATSSHFATAERQFRFPTEYGGQRPP---TAQWTVTGAGAVLLSREGSG 180 (337)
T ss_pred CCCEEEEEEcchhhhhhhhccCchhccccCCC---cceEEeeccEEEEEecCCCC
Confidence 9999999999998865 322 1 2223 67899999999999987643
No 46
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.63 E-value=4.6e-14 Score=141.31 Aligned_cols=185 Identities=13% Similarity=0.215 Sum_probs=119.6
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceec-CCCcc---CCCCCCChHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCI-PLNLH---EMQPDVSLKRSREE 77 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~~---~~~~~~~l~~~~~~ 77 (401)
++|.|+|+|...|.- .+.+++.+.+.. +....... .. ++......+... .++.. .+++. .. .....
T Consensus 1 ~~i~I~G~g~~~p~g---~~~~~~~~~l~~-g~~~~~~~---~~-~~~~~~~~~~~~~i~~~~~~~~~~~~-~~-~~~~~ 70 (406)
T cd00834 1 RRVVITGLGAVTPLG---NGVEEFWEALLA-GRSGIRPI---TR-FDASGFPSRIAGEVPDFDPEDYLDRK-EL-RRMDR 70 (406)
T ss_pred CcEEEECcceeCCCc---CCHHHHHHHHHc-CCCeeEEC---Cc-ccccCCCccEEEEcCCCChhhcCCHH-Hh-ccCCH
Confidence 368999999999998 688888887642 11100000 00 001111122110 01000 00110 00 01123
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCE----EEEeee-cC--------------------------CCCCcHHHHHHHHcCC
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDI----LVTNCS-IF--------------------------CPTPSISSMIINKFGF 126 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~-~~--------------------------~~~p~~a~~l~~~LGl 126 (401)
...|+.+|+++||+++|+++++||. ++++++ .+ ...+..+.+|+..||+
T Consensus 71 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 150 (406)
T cd00834 71 FAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGL 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCC
Confidence 5689999999999999999877664 444432 11 1224567899999999
Q ss_pred CCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccC-----------CCC------------CCCCcchh
Q 044359 127 RSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISS-----------NGY------------TGSTKSML 183 (401)
Q Consensus 127 ~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~-----------~~~------------~~~d~~~~ 183 (401)
+ .+.+.+. .+|++++.||..|..+|++|..++|||+++|..+. .+. ++.++
T Consensus 151 ~--g~~~~v~-~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~--- 224 (406)
T cd00834 151 R--GPNYTVS-TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR--- 224 (406)
T ss_pred C--Ccccccc-hHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC---
Confidence 5 5889999 59999999999999999999999999999998761 111 11122
Q ss_pred hhhhcccccceEEEEecCCC
Q 044359 184 ISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 184 i~~~lfGDGAaA~ll~~~~~ 203 (401)
..+++||||+|+||++.+.
T Consensus 225 -~g~~~geGA~a~vL~~~~~ 243 (406)
T cd00834 225 -DGFVLGEGAGVLVLESLEH 243 (406)
T ss_pred -CCEeeeccEEEEEEecHHH
Confidence 3578999999999998654
No 47
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.61 E-value=3.9e-14 Score=140.91 Aligned_cols=94 Identities=12% Similarity=0.269 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|++++|||.||+++. ++...|..+..++..||++.++++++++ .+|++++.+|..|.++|++
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I~s 100 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSIAA 100 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHHHC
Confidence 5799999999999999999999999998864 4555677788899999997458899999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..++|||+++|.+|.
T Consensus 101 G~~~~vLv~g~e~~s~ 116 (386)
T cd00751 101 GEADVVVAGGVESMSR 116 (386)
T ss_pred CCCCeEEEeeeecccc
Confidence 9999999999998754
No 48
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.60 E-value=6.8e-14 Score=139.24 Aligned_cols=94 Identities=14% Similarity=0.273 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|++++|||.||++++ +....+..+..++..+|++..+++++|+ .+|++++.++..|.++|++
T Consensus 26 ~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~-~~Casg~~ai~~A~~~I~s 104 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLN-KVCGSGLKALHLAAQAIRC 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEec-ccchhHHHHHHHHHHHHHc
Confidence 5799999999999999999999999999875 4334566788899999998458999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..++|||+++|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 105 GDAEVIIAGGQENMSL 120 (393)
T ss_pred CCCCEEEEEEEhhhcc
Confidence 9999999999998875
No 49
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.57 E-value=1.4e-13 Score=136.68 Aligned_cols=94 Identities=16% Similarity=0.341 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|++++|||.||+++. ++...|..+..++..+|++.++++++++ .+|++++.+|..|.++|++
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 99 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQLIRA 99 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHHHHC
Confidence 5799999999999999999999999998764 4444577788899999998558999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..++|||+++|.+|.
T Consensus 100 G~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 100 GEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCEEEEEEehhhcc
Confidence 9999999999998664
No 50
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.54 E-value=9.8e-15 Score=111.99 Aligned_cols=66 Identities=18% Similarity=0.347 Sum_probs=56.3
Q ss_pred EEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCC
Q 044359 133 INLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 133 ~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~ 203 (401)
|||+ ++|+|++.||++|..+++++..++||||++|+.+..+++ .++. ...+|||||+|+||+++++
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~~-~~~~---~~~~~gDgAaA~vl~~~~~ 66 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVDR-TDRQ---TAFIFGDGAAAVVLSRDEE 66 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSHT-THHH---HHTTB-EEEEEEEEEEESS
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccccccc-cccC---cceeecchheEEEEEecCC
Confidence 7999 599999999999999999999999999999999997765 3444 5689999999999999853
No 51
>PRK09051 beta-ketothiolase; Provisional
Probab=99.54 E-value=7.4e-13 Score=131.67 Aligned_cols=94 Identities=16% Similarity=0.256 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCC-CcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPT-PSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~-p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
..+|+.+|+++||+++|++++|||.||++++ +.... +..+..++..+|++.++++++|+ .+|+|++.|+..|.++|+
T Consensus 27 ~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (394)
T PRK09051 27 PTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAAQAIL 105 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999874 44433 34566677888997568999999 599999999999999999
Q ss_pred cCCCCeEEEEeeccccC
Q 044359 156 VHKNSLALVLSMEAISS 172 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~ 172 (401)
+|..++|||+++|++|.
T Consensus 106 sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 106 LGDADVAIGGGAESMSR 122 (394)
T ss_pred cCCCCEEEEEeehhccc
Confidence 99999999999999875
No 52
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.51 E-value=1.4e-12 Score=130.75 Aligned_cols=121 Identities=11% Similarity=0.088 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCC-cC----EEEEeeec-C----------------------CCC--CcHHHHHHHHcCC
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKS-ID----ILVTNCSI-F----------------------CPT--PSISSMIINKFGF 126 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~d-Id----~li~~s~~-~----------------------~~~--p~~a~~l~~~LGl 126 (401)
....|+..|+++||+++|+++++ ++ .++++++. + ... ...+.+|+..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 35689999999999999998765 33 23444321 0 111 4567789999999
Q ss_pred CCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccC---------------------CCCC-CCCcchhh
Q 044359 127 RSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISS---------------------NGYT-GSTKSMLI 184 (401)
Q Consensus 127 ~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~---------------------~~~~-~~d~~~~i 184 (401)
. +.+.+.+. .+|++++.||..|.++|++|..+.+||.++|..+. ...+ +.++
T Consensus 151 ~-~Gp~~tv~-~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~---- 224 (407)
T cd00828 151 S-HGPIKTPV-GACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETR---- 224 (407)
T ss_pred C-CCCCcCcc-cHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCC----
Confidence 4 35889999 59999999999999999999999999999998651 0111 1122
Q ss_pred hhhcccccceEEEEecCCC
Q 044359 185 SNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 185 ~~~lfGDGAaA~ll~~~~~ 203 (401)
..+++||||+++||++.+.
T Consensus 225 ~G~~~gEGAaalvLe~~~~ 243 (407)
T cd00828 225 DGFVEAEGAGVLVLERAEL 243 (407)
T ss_pred CcEEeecceEEEEEeeHHH
Confidence 4688999999999998654
No 53
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.51 E-value=2.5e-12 Score=128.06 Aligned_cols=93 Identities=14% Similarity=0.185 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCC--CCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCP--TPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~--~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
..+|+.+|+++||+++|+++++||.||++++ ++.. .+..+..++..||++ ..+.++++ .+|++++.+|..|..+|
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A~~~I 99 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQAYLAV 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHHHHHH
Confidence 4699999999999999999999999998764 4432 466788899999997 68999999 59999999999999999
Q ss_pred HcCCCCeEEEEeeccccC
Q 044359 155 KVHKNSLALVLSMEAISS 172 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~ 172 (401)
++|..++|||+++|.+|.
T Consensus 100 ~sG~~~~vLv~G~e~~s~ 117 (389)
T PRK06064 100 ASGEADVVLAAGVEKMTD 117 (389)
T ss_pred HCCCCCEEEEEEEEeccc
Confidence 999999999999997654
No 54
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.50 E-value=1.2e-12 Score=131.99 Aligned_cols=119 Identities=18% Similarity=0.211 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcC----EEEEeee-cCCC-------------------CCcHHHHHHHHcCCCCCcceE
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSID----ILVTNCS-IFCP-------------------TPSISSMIINKFGFRSNIKSI 133 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~-~~~~-------------------~p~~a~~l~~~LGl~~~~~~~ 133 (401)
...|+.+|+++||+++|+++++|| .|+++++ .++. .+..+..++..+|+. .+.+
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCcc
Confidence 457999999999999999999998 7777753 2221 345677899999996 4889
Q ss_pred EeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------CC-------CCCCcchhhhhhcccccceE
Q 044359 134 NLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------GY-------TGSTKSMLISNTVFRMGGAA 195 (401)
Q Consensus 134 ~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~-------~~~d~~~~i~~~lfGDGAaA 195 (401)
.+. .+|++++.||..|.++|++|..++|||+++|..... .. ++.++ ..+++||||+|
T Consensus 165 ~v~-~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~----~g~~~geGAaa 239 (424)
T smart00825 165 TVD-TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADA----DGYVRGEGVGV 239 (424)
T ss_pred ccc-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCC----CcccccceEEE
Confidence 999 599999999999999999999999999999974321 10 01112 36789999999
Q ss_pred EEEecCCC
Q 044359 196 ILLSNRQQ 203 (401)
Q Consensus 196 ~ll~~~~~ 203 (401)
+||++.+.
T Consensus 240 lVLe~~e~ 247 (424)
T smart00825 240 VVLKRLSD 247 (424)
T ss_pred EEEccHHH
Confidence 99998543
No 55
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.47 E-value=4.7e-12 Score=125.79 Aligned_cols=93 Identities=13% Similarity=0.072 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCC--CcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPT--PSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~--p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
..+|+.+|+++||+++|++++|||.|++++++++.. +..+..+++.||+. ..+++++++ +|+++..+++.|..+|+
T Consensus 24 ~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~~-~casg~~al~~A~~~I~ 101 (386)
T PRK08313 24 MAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVHT-AGSVGGSTAVVAASLVQ 101 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEec-cCHHHHHHHHHHHHHHH
Confidence 469999999999999999999999999886443321 12336899999997 678999995 99999999999999999
Q ss_pred cCCCCeEEEEeeccccC
Q 044359 156 VHKNSLALVLSMEAISS 172 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~ 172 (401)
+|..++||||++|+++.
T Consensus 102 sG~~~~vLVvg~e~~s~ 118 (386)
T PRK08313 102 SGVYRRVLAVAWEKQSE 118 (386)
T ss_pred CCCCCEEEEEEEEEccC
Confidence 99999999999998653
No 56
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.47 E-value=1.2e-11 Score=122.71 Aligned_cols=93 Identities=14% Similarity=0.167 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|+++++||.++++++ +....+..+..++..||++ .++.++++ .+|++++.++..|.++|++
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHHh
Confidence 5799999999999999999999999998764 4433567889999999997 78999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..+.|||+++|.+|.
T Consensus 94 G~~~~vlv~g~e~~s~ 109 (375)
T cd00829 94 GLADVVLVVGAEKMSD 109 (375)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998775
No 57
>PRK05790 putative acyltransferase; Provisional
Probab=99.46 E-value=6.9e-12 Score=125.09 Aligned_cols=93 Identities=13% Similarity=0.267 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|++++|||.||+++. +....+..+..++..+|++.++++++++ .+|++++.+|..|.++|++
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 104 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN-KVCGSGLKAVALAAQAIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec-ccchHHHHHHHHHHHHHHc
Confidence 5799999999999999999999999998764 3222444556677788997558899999 4999999999999999999
Q ss_pred CCCCeEEEEeecccc
Q 044359 157 HKNSLALVLSMEAIS 171 (401)
Q Consensus 157 g~~~~vLvv~~e~~s 171 (401)
|..++|||+++|.+|
T Consensus 105 G~~d~vLv~G~e~~s 119 (393)
T PRK05790 105 GDADIVVAGGQESMS 119 (393)
T ss_pred CCCCEEEEEeeeccc
Confidence 999999999999864
No 58
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.42 E-value=4e-11 Score=120.74 Aligned_cols=182 Identities=14% Similarity=0.179 Sum_probs=115.1
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
.|.|+|+|...|-. .+-+++.+.+.. +...... +.+ +...++..+....-+.. +++ .+.. ......++
T Consensus 12 ~VvITG~G~vs~~G---~~~~~~~~~L~~-G~s~i~~---~~~-~~~~~~~~~~~g~~~~~--~~~-~~~~-~~~~~~~~ 79 (425)
T PRK06501 12 IVAVTGMGVVTSLG---QGKADNWAALTA-GESGIHT---ITR-FPTEGLRTRIAGTVDFL--PES-PFGA-SALSEALA 79 (425)
T ss_pred CEEEEeeeEECCCC---CCHHHHHHHHHc-CCCceEc---CCc-ccccCCCCceEEEEeec--ccc-cccc-cCHHHHHH
Confidence 49999999999998 688999987652 2111000 000 11122223211100000 010 0000 11245688
Q ss_pred HHHHHHHHHhCCCCcCCcC------------------EEEEeee----------------cC-------CCCCcHHHHHH
Q 044359 83 CTIVKDLLSKHKINPKSID------------------ILVTNCS----------------IF-------CPTPSISSMII 121 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId------------------~li~~s~----------------~~-------~~~p~~a~~l~ 121 (401)
..|+++||+++|++..+++ .++.++. +. ...|+.+.+|+
T Consensus 80 ~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 159 (425)
T PRK06501 80 RLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRLA 159 (425)
T ss_pred HHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHHH
Confidence 9999999999999654322 1111111 01 13456788999
Q ss_pred HHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeecc---------------ccCCCC--------CCC
Q 044359 122 NKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEA---------------ISSNGY--------TGS 178 (401)
Q Consensus 122 ~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~---------------~s~~~~--------~~~ 178 (401)
..+|+. .++++++ .+|+|++.||..|.++|++|..+++||+++|. +|...+ ++.
T Consensus 160 ~~~gl~--G~~~~i~-~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~ 236 (425)
T PRK06501 160 DRFGTR--GLPISLS-TACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSK 236 (425)
T ss_pred HHhCCC--CCceeec-CccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCC
Confidence 999995 5889999 59999999999999999999999999999993 222111 012
Q ss_pred CcchhhhhhcccccceEEEEecCCC
Q 044359 179 TKSMLISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 179 d~~~~i~~~lfGDGAaA~ll~~~~~ 203 (401)
+++ .+++||||+|+||++.+.
T Consensus 237 ~r~----G~v~GEGaaalVLe~~~~ 257 (425)
T PRK06501 237 DRD----GFVMAEGAGALVLESLES 257 (425)
T ss_pred CCC----CeeeeccEEEEEECcHHH
Confidence 333 588999999999998654
No 59
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.42 E-value=2.5e-11 Score=122.10 Aligned_cols=120 Identities=18% Similarity=0.222 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCE----EEEeee-cCC-------------------CCCcHHHHHHHHcCCCCCcce
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDI----LVTNCS-IFC-------------------PTPSISSMIINKFGFRSNIKS 132 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~-~~~-------------------~~p~~a~~l~~~LGl~~~~~~ 132 (401)
....|+.+|+++||+++|+++++++. +++++. .++ ..+..+..++..+|+. .+.
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCc
Confidence 35789999999999999999888774 555542 111 1134677899999995 489
Q ss_pred EEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------------CCC-CCCcchhhhhhcccccce
Q 044359 133 INLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------------GYT-GSTKSMLISNTVFRMGGA 194 (401)
Q Consensus 133 ~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------------~~~-~~d~~~~i~~~lfGDGAa 194 (401)
+.+. .+|++++.||..|..+|++|..+.+||+++|.+... ..+ +.++ ...++||||+
T Consensus 164 ~~v~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~----~g~~~geGAa 238 (421)
T cd00833 164 LTVD-TACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADA----DGYVRGEGVG 238 (421)
T ss_pred eeec-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCC----CCeeeeceEE
Confidence 9999 599999999999999999999999999999985310 001 1122 3578999999
Q ss_pred EEEEecCCC
Q 044359 195 AILLSNRQQ 203 (401)
Q Consensus 195 A~ll~~~~~ 203 (401)
|+||++.+.
T Consensus 239 alvL~~~~~ 247 (421)
T cd00833 239 VVVLKRLSD 247 (421)
T ss_pred EEEEeeHHH
Confidence 999998554
No 60
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.41 E-value=1.7e-11 Score=121.48 Aligned_cols=94 Identities=18% Similarity=0.257 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-c-CCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-I-FCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~-~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
+.+|+..+++.+|++++++|++||.||+++. + +...++.+...+-..|++.+++++.|+ ..|+|++.|+.+|.+.|+
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I~ 107 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQIM 107 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHHH
Confidence 5799999999999999999999999999874 3 222478899999999999899999999 699999999999999999
Q ss_pred cCCCCeEEEEeeccccC
Q 044359 156 VHKNSLALVLSMEAISS 172 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~ 172 (401)
+|..+.+|..+.|.+|+
T Consensus 108 ~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 108 SGMEDLVIAGGTEMMSY 124 (417)
T ss_pred cCCCCEEEEeeeeccCC
Confidence 99999999999999996
No 61
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.41 E-value=1.6e-11 Score=115.61 Aligned_cols=119 Identities=17% Similarity=0.223 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 76 EETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
+.-.+|+.+|+++||+++|++++|||.++.++..++..|+ ..+++.||++ .+++.+ +|+++..||.+|..+++
T Consensus 52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~Va 124 (334)
T PRK12404 52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALIVN 124 (334)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHH
Confidence 3446899999999999999999999999999866655665 4999999954 599996 99999999999999999
Q ss_pred cCCCCeEEEEeeccccC---CCCC----CCCcchhhhhhcccccceEEEEecCCC
Q 044359 156 VHKNSLALVLSMEAISS---NGYT----GSTKSMLISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~---~~~~----~~d~~~~i~~~lfGDGAaA~ll~~~~~ 203 (401)
+|..++||++++-..+. .|.+ +..|. .+...--=||+|+||++...
T Consensus 125 SG~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp--~taqwTvTgaga~~l~~~~~ 177 (334)
T PRK12404 125 SGGAKYVLTGASSHNAAVEKQFRYPTEYGGQKP--PTAQWTVTGAGAAILSKTGD 177 (334)
T ss_pred cCCCCEEEEEeCcccchhhhhccCcccccCcCC--CcccEEEEceEEEEEecCCC
Confidence 99999999999766543 1221 22221 13344456899999988653
No 62
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.40 E-value=2.2e-11 Score=121.40 Aligned_cols=91 Identities=16% Similarity=0.351 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCC---cHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTP---SISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDL 153 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p---~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~ 153 (401)
..+|+.+|+++||+++|++++|||.+++++. ++...| +....+...++ ..+++++|+ .+|++++.++..|.++
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~~ 108 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAME 108 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHHH
Confidence 5799999999999999999999999999874 333222 33334444454 468999999 5999999999999999
Q ss_pred HHcCCCCeEEEEeecccc
Q 044359 154 LKVHKNSLALVLSMEAIS 171 (401)
Q Consensus 154 i~~g~~~~vLvv~~e~~s 171 (401)
|++|..++|||+++|++|
T Consensus 109 I~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 109 IATGMADIVIAGGVEHMT 126 (394)
T ss_pred HHcCCCCEEEEeeecccc
Confidence 999999999999999776
No 63
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.39 E-value=1.2e-10 Score=116.98 Aligned_cols=186 Identities=9% Similarity=0.095 Sum_probs=118.3
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceec-CCCcc--C-CCCCCChHHHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCI-PLNLH--E-MQPDVSLKRSRE 76 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~~--~-~~~~~~l~~~~~ 76 (401)
+++|.|+|+|...|.- .+.+++.+.+.. +......+ .+ +...+...+... .++.. . .++. .+ ....
T Consensus 1 m~~v~ItG~g~~~p~g---~~~~~~w~~l~~-g~~~~~~~---~~-~~~~~~~~~~~g~i~~f~~~~~~~~~-~~-~~~~ 70 (411)
T PRK07314 1 KRRVVVTGLGAVSPLG---NDVESTWKNLLA-GKSGIGPI---TH-FDTSDLAVKIAGEVKDFNPDDYMSRK-EA-RRMD 70 (411)
T ss_pred CCcEEEEcceEECCCc---CCHHHHHHHHHh-CCCcEEEC---Cc-ccccCCCccEEEEeCCcChhhcCCHH-Hh-hcCC
Confidence 4689999999999998 689999887653 11100000 00 011111111100 00000 0 0110 00 0112
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcC----EEEEeeecC----------------------C----CCC-cHHHHHHHHcC
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSID----ILVTNCSIF----------------------C----PTP-SISSMIINKFG 125 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~----------------------~----~~p-~~a~~l~~~LG 125 (401)
....|+..|+++||+++|++++++| .++++++.+ . ..+ ..+.++...+|
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (411)
T PRK07314 71 RFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYG 150 (411)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhC
Confidence 3468999999999999999998888 466654211 0 111 24567899999
Q ss_pred CCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCC----------------CC-------CCCcch
Q 044359 126 FRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNG----------------YT-------GSTKSM 182 (401)
Q Consensus 126 l~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~----------------~~-------~~d~~~ 182 (401)
+. -+.+.+. .+|++++.||..|..+|++|..+.|||.++|..+... ++ +.++
T Consensus 151 l~--Gp~~tv~-~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~-- 225 (411)
T PRK07314 151 AK--GPNHSIV-TACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR-- 225 (411)
T ss_pred CC--Cccccch-hhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC--
Confidence 85 4778888 5999999999999999999999999999998743210 00 1112
Q ss_pred hhhhhcccccceEEEEecCCC
Q 044359 183 LISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 183 ~i~~~lfGDGAaA~ll~~~~~ 203 (401)
..+++||||+|+||++.+.
T Consensus 226 --dG~~~geGAaavvL~~~~~ 244 (411)
T PRK07314 226 --DGFVMGEGAGILVLEELEH 244 (411)
T ss_pred --CCEeEEceEEEEEEeeHHH
Confidence 3578999999999998543
No 64
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.38 E-value=3.3e-11 Score=119.78 Aligned_cols=94 Identities=18% Similarity=0.254 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCC-CCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCP-TPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~-~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
..+|+.+|+++||+++|+.+++||.++++++ ++.. .+..+..++..+|++..++++.|+ .+|++++.|+..|..+|+
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~~I~ 105 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAERIM 105 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHH
Confidence 4699999999999999988899999999864 4332 366777899999997559999999 599999999999999999
Q ss_pred cCCCCeEEEEeeccccC
Q 044359 156 VHKNSLALVLSMEAISS 172 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~ 172 (401)
+|..+.+||+++|.+|.
T Consensus 106 sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 106 LGHSEAVIAGGAESMSL 122 (391)
T ss_pred cCCCCEEEEEEEeeccc
Confidence 99999999999998874
No 65
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.35 E-value=1e-10 Score=114.65 Aligned_cols=90 Identities=12% Similarity=0.203 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcC
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVH 157 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g 157 (401)
+.+|+..|++++++ |++ ++||.+|+++.... ....+..++..+|++..++++.|+ .+|++++.++..|.++|++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~-~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTID-RQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehh-hhhhHHHHHHHHHHHHHHCC
Confidence 46999999999865 896 89999999874321 244555688999998679999999 59999999999999999999
Q ss_pred CCCeEEEEeeccccC
Q 044359 158 KNSLALVLSMEAISS 172 (401)
Q Consensus 158 ~~~~vLvv~~e~~s~ 172 (401)
..+.+|++++|.+|.
T Consensus 100 ~~d~~l~gG~E~ms~ 114 (361)
T PRK06690 100 AGKCYIAGGVESTST 114 (361)
T ss_pred CCCEEEEeccccccC
Confidence 999999999999985
No 66
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.35 E-value=3.8e-11 Score=120.43 Aligned_cols=191 Identities=10% Similarity=0.120 Sum_probs=114.8
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHH---HHHcCCCCceecC--CCccCCCCCCChHHH-
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKV---LEKSGIGDESCIP--LNLHEMQPDVSLKRS- 74 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i---~~~~GI~~R~~~~--~~~~~~~~~~~l~~~- 74 (401)
++.|.|+|+|...|-- .+.+++.+.+.. ++..-..++..... ....+.....+.. ++... +..-..+..
T Consensus 1 m~~VvItG~g~vsp~g---~~~~~~w~~l~~-g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r 75 (410)
T PRK07103 1 MDEVVVTGVGVVSAIG---QGRPSFAAALLA-GRHAFGVMRRPGRQVPDDAGAGLASAFIGAELDSLAL-PERLDAKLLR 75 (410)
T ss_pred CCCEEEEcceEECCCc---CCHHHHHHHHHc-CCCeEecCCcccccccccccccCCCceEEEEeCCCCh-hhcCCHHHhh
Confidence 4689999999999998 688999987642 11100000000000 0000111111110 11100 000000011
Q ss_pred -HHHHHHHHHHHHHHHHHhCCCC---cCCcCEEEEeee----------------cCCCCC---------cHHHHHHHHcC
Q 044359 75 -REETEEVLCTIVKDLLSKHKIN---PKSIDILVTNCS----------------IFCPTP---------SISSMIINKFG 125 (401)
Q Consensus 75 -~~~~~~la~~Aa~~aL~~ag~~---~~dId~li~~s~----------------~~~~~p---------~~a~~l~~~LG 125 (401)
......|+..|+++||+++|++ +++|+.++.++. +.+..| ..+.+|+..||
T Consensus 76 ~~~~~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 155 (410)
T PRK07103 76 RASLSAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFG 155 (410)
T ss_pred cCCHHHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhC
Confidence 1124679999999999999986 456666554332 111112 24567889999
Q ss_pred CCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccc-cCC-----------------------CC-CCCCc
Q 044359 126 FRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAI-SSN-----------------------GY-TGSTK 180 (401)
Q Consensus 126 l~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~-s~~-----------------------~~-~~~d~ 180 (401)
+. .+++.+.+ +|++++.||..|.++|++|..+.+||++++.. +.. .. ++.++
T Consensus 156 l~--G~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~ 232 (410)
T PRK07103 156 IR--GEGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR 232 (410)
T ss_pred CC--CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCC
Confidence 95 47888994 99999999999999999999999999998631 100 00 01122
Q ss_pred chhhhhhcccccceEEEEecCCC
Q 044359 181 SMLISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 181 ~~~i~~~lfGDGAaA~ll~~~~~ 203 (401)
..+++||||+|+||++.+.
T Consensus 233 ----dG~v~gEGaaalvLe~~~~ 251 (410)
T PRK07103 233 ----DGFIYGEACGAVVLESAES 251 (410)
T ss_pred ----CCeeEeeeEEEEEEccHHH
Confidence 3589999999999998553
No 67
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.34 E-value=1.1e-10 Score=116.98 Aligned_cols=186 Identities=11% Similarity=0.113 Sum_probs=116.5
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceec-CCCccC--CCCCCChHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCI-PLNLHE--MQPDVSLKRSREET 78 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~~~--~~~~~~l~~~~~~~ 78 (401)
+.|.|+|+|...|.- .+.+++.+.+.. +...... +.+ ++..+...+... .++... +.+.... ......
T Consensus 1 ~~v~ItG~g~~~p~g---~~~~~~~~~l~~-g~s~~~~---~~~-~~~~~~~~~~~g~i~~f~~~~~~~~~~~-~~~~~~ 71 (407)
T TIGR03150 1 RRVVVTGLGAVTPLG---NGVEEFWENLLA-GKSGIGP---ITR-FDASDLPVKIAGEVKDFDPEDYIDKKEA-RRMDRF 71 (407)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHc-CCCeeEE---CCc-ccccCCCCcEEEEeCCcChhhcCCHHHH-hhcCHH
Confidence 468999999999998 688999887643 1110000 000 001111111100 000000 0000000 011224
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCE----EEEeeec-C-----------------C--------CCC-cHHHHHHHHcCCC
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDI----LVTNCSI-F-----------------C--------PTP-SISSMIINKFGFR 127 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~----li~~s~~-~-----------------~--------~~p-~~a~~l~~~LGl~ 127 (401)
.+|+.+|+++||+++|+++++||. ++++++. + . ..+ ..+.++...+|+.
T Consensus 72 ~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~ 151 (407)
T TIGR03150 72 IQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAK 151 (407)
T ss_pred HHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCC
Confidence 689999999999999999999886 5554421 1 0 011 2456788899985
Q ss_pred CCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------C---C--------C-CCCcchhh
Q 044359 128 SNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------G---Y--------T-GSTKSMLI 184 (401)
Q Consensus 128 ~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~---~--------~-~~d~~~~i 184 (401)
.+.+.+. .+|++++.||..|..+|++|..+.+||+++|..... + + + +.++
T Consensus 152 --g~~~~v~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~---- 224 (407)
T TIGR03150 152 --GPNHAVV-TACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR---- 224 (407)
T ss_pred --Ccccccc-cHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC----
Confidence 5788888 599999999999999999999999999999963221 0 0 0 0111
Q ss_pred hhhcccccceEEEEecCCC
Q 044359 185 SNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 185 ~~~lfGDGAaA~ll~~~~~ 203 (401)
..+++||||+|+||++.+.
T Consensus 225 ~g~~~gEGAaalvL~~~~~ 243 (407)
T TIGR03150 225 DGFVMGEGAGVLVLEELEH 243 (407)
T ss_pred CcEEEeceEEEEEEeeHHH
Confidence 3578999999999998653
No 68
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=1.8e-10 Score=114.36 Aligned_cols=94 Identities=16% Similarity=0.317 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeec-CCC-CCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSI-FCP-TPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~-~~~-~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
+.+|+.+|++++|+++|+++++||.+++++.. ... ....+..+...+|++.+++++.|++ +|+|++.|+..|.+.|+
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~~-~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTIDC-QCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEec-ccccHHHHHHHHHHHHH
Confidence 57999999999999999999999999998742 222 2345667788899986799999995 99999999999999999
Q ss_pred cCCCCeEEEEeeccccC
Q 044359 156 VHKNSLALVLSMEAISS 172 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~ 172 (401)
+|..+.+|+++.|++|.
T Consensus 105 sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 105 AGAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCCEEEEEeEecCCC
Confidence 99999999999999976
No 69
>PRK06158 thiolase; Provisional
Probab=99.31 E-value=2.4e-10 Score=113.52 Aligned_cols=88 Identities=15% Similarity=0.057 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcC
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVH 157 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g 157 (401)
..+|+.+|+++||+++|++++|||.+++++.. ...|+ ..+++.||++ ..+.++++ .+|+++..+|..|..+|++|
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~-~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~I~sG 102 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVDGLFTASPD-DALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALALEAG 102 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC-CCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHHHHcC
Confidence 46999999999999999999999999987632 22343 5799999997 57888888 59999999999999999999
Q ss_pred CCCeEEEE-eeccc
Q 044359 158 KNSLALVL-SMEAI 170 (401)
Q Consensus 158 ~~~~vLvv-~~e~~ 170 (401)
..++|||+ +.|..
T Consensus 103 ~~d~vLV~~g~~~~ 116 (384)
T PRK06158 103 LCDVALICYGSNQR 116 (384)
T ss_pred CCCEEEEeeccccc
Confidence 99999998 44433
No 70
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.30 E-value=3e-10 Score=113.17 Aligned_cols=93 Identities=12% Similarity=0.192 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecC-CCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIF-CPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|++++|+++|++++|||.+++++... ...+..+..++..+|++.+.+++.++ .+|++++.++..|.++|++
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 103 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVN-KVCASGMKAVMLAAQSIQL 103 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEe-ccchHHHHHHHHHHHHHHc
Confidence 469999999999999999999999999876321 11234556688999997668899999 4999999999999999999
Q ss_pred CCCCeEEEEeecccc
Q 044359 157 HKNSLALVLSMEAIS 171 (401)
Q Consensus 157 g~~~~vLvv~~e~~s 171 (401)
|..+.||+++.|.+|
T Consensus 104 G~~d~vlv~G~E~~s 118 (394)
T PLN02644 104 GINDVVVAGGMESMS 118 (394)
T ss_pred CCCCEEEEEeEEecC
Confidence 999999999988775
No 71
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.28 E-value=1.4e-11 Score=122.38 Aligned_cols=95 Identities=17% Similarity=0.306 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCC-cHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTP-SISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p-~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
+.+|+.+|++++|+++|+++++||.||+++. ++...| ..+..++..+|++.++++++|+ .+|+|++.||..|.++|+
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999874 555544 4888999999998669999999 599999999999999999
Q ss_pred cCCCCeEEEEeeccccCC
Q 044359 156 VHKNSLALVLSMEAISSN 173 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~~ 173 (401)
+|..+.+|++++|++|..
T Consensus 106 sG~~d~vlagGvE~ms~~ 123 (392)
T PRK07108 106 AGEGDVFVAGGVESISCV 123 (392)
T ss_pred CCCCCEEEEEEEeccCCC
Confidence 999999999999999864
No 72
>PRK08256 lipid-transfer protein; Provisional
Probab=99.28 E-value=1e-09 Score=109.49 Aligned_cols=89 Identities=15% Similarity=0.226 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|++++|||.+++++. ++.. . ...+...+|+. .+++++++ .+|++++.++..|.++|++
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~-~--~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I~s 96 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST-S--GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAVRS 96 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc-h--hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHHHC
Confidence 4699999999999999999999999988764 2221 1 23467789996 57889999 5999999999999999999
Q ss_pred CCCCeEEEEeecccc
Q 044359 157 HKNSLALVLSMEAIS 171 (401)
Q Consensus 157 g~~~~vLvv~~e~~s 171 (401)
|..++|||+++|.+|
T Consensus 97 G~~d~vLv~g~e~~s 111 (391)
T PRK08256 97 GAADCALALGFEQMQ 111 (391)
T ss_pred CCCCEEEEEEEeecc
Confidence 999999999999865
No 73
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.27 E-value=5.3e-10 Score=112.04 Aligned_cols=186 Identities=10% Similarity=0.123 Sum_probs=117.0
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecC-CCccC---CCCCCChHHHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIP-LNLHE---MQPDVSLKRSRE 76 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~-~~~~~---~~~~~~l~~~~~ 76 (401)
++.|.|+|+|...|-. .+.+++.+.+.. ++..-.. +.+ +...+...+.... ++... .++ ..+ ....
T Consensus 1 m~~v~ItG~g~vsp~G---~~~~~~~~~L~~-G~s~i~~---~~~-~~~~~~~~~~~g~i~~f~~~~~~~~-~~~-~~~~ 70 (406)
T PRK08439 1 MKRVVVTGIGMINSLG---LNKESSFKAICN-GECGIKK---ITL-FDASDFPVQIAGEITDFDPTEVMDP-KEV-KKAD 70 (406)
T ss_pred CCCEEEEeeEEECCCc---CCHHHHHHHHHc-CCCceEe---CCC-ccccCCCCceeEEcCCcChhhcCCH-HHH-hhcC
Confidence 3679999999999998 688998887642 2110000 000 0111111111110 00000 000 000 0112
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCE----EEEeee-cC-------------------------CCCC-cHHHHHHHHcC
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDI----LVTNCS-IF-------------------------CPTP-SISSMIINKFG 125 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~-~~-------------------------~~~p-~~a~~l~~~LG 125 (401)
....|+..|+++||+++|+++++++. +++++. .+ ...+ ..+..|...+|
T Consensus 71 ~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (406)
T PRK08439 71 RFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHG 150 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhC
Confidence 24689999999999999999877763 444332 10 0112 46778999999
Q ss_pred CCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccc-cCC----------C-----------C-CCCCcch
Q 044359 126 FRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAI-SSN----------G-----------Y-TGSTKSM 182 (401)
Q Consensus 126 l~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~-s~~----------~-----------~-~~~d~~~ 182 (401)
+. -+.+.+. .+|++++.||..|.++|++|..+.+||+++|.. +.. + . ++.++
T Consensus 151 l~--Gp~~~~~-~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~-- 225 (406)
T PRK08439 151 LK--GPNLSSV-TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDR-- 225 (406)
T ss_pred CC--CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCC--
Confidence 96 4778888 599999999999999999999999999999963 110 0 0 01223
Q ss_pred hhhhhcccccceEEEEecCCC
Q 044359 183 LISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 183 ~i~~~lfGDGAaA~ll~~~~~ 203 (401)
..+++|+||+++||++.+.
T Consensus 226 --~G~v~gEGa~~lvLe~~~~ 244 (406)
T PRK08439 226 --DGFVMGEGAGALVLEEYES 244 (406)
T ss_pred --CcEEeeCceEEEEEccHHH
Confidence 3588999999999998553
No 74
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.25 E-value=1.9e-11 Score=122.22 Aligned_cols=95 Identities=17% Similarity=0.314 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|++++|||.||++++ +....|..+..++..+|++.++++++|+ .+|++++.++..|.++|++
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQVQT 104 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 5799999999999999999999999999874 5555677888899999998668999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccCC
Q 044359 157 HKNSLALVLSMEAISSN 173 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~~ 173 (401)
|..+.|||+++|.+|..
T Consensus 105 G~~d~vLv~G~E~ms~~ 121 (404)
T PRK06205 105 GAADVVIAGGAESMSNV 121 (404)
T ss_pred CCCCEEEEeeehhhccC
Confidence 99999999999999864
No 75
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.25 E-value=2.3e-11 Score=121.03 Aligned_cols=95 Identities=13% Similarity=0.240 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|++++|||.||+++. +....+..+..++..+|++.++++++|+ .+|+|++.||..|.++|++
T Consensus 26 ~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (393)
T PRK08235 26 ATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQIIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHC
Confidence 5799999999999999999999999999874 3212345566789999997579999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccCC
Q 044359 157 HKNSLALVLSMEAISSN 173 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~~ 173 (401)
|..++|||+++|.+|..
T Consensus 105 G~~d~vLvvG~E~ms~~ 121 (393)
T PRK08235 105 GDASVIVAGGMESMSNA 121 (393)
T ss_pred CCCCEEEEEeeeccccC
Confidence 99999999999999864
No 76
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.23 E-value=5.3e-11 Score=118.34 Aligned_cols=95 Identities=13% Similarity=0.285 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCC-CCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCP-TPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~-~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
+.+|+.+|++++|+++|++|++||.||+++. +... .+..+...+..+|++.++++++|+ .+|+|++.||.+|.++|+
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I~ 106 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKVR 106 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHHH
Confidence 6799999999999999999999999999874 4333 245666777889997679999999 599999999999999999
Q ss_pred cCCCCeEEEEeeccccCC
Q 044359 156 VHKNSLALVLSMEAISSN 173 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~~ 173 (401)
+|..+++|++++|.+|+.
T Consensus 107 sG~~d~vLv~G~E~mS~~ 124 (402)
T PRK08242 107 SGWDDLVIAGGVESMSRV 124 (402)
T ss_pred cCCCCEEEEEEEEccCCC
Confidence 999999999999999874
No 77
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.21 E-value=6e-11 Score=118.05 Aligned_cols=93 Identities=10% Similarity=0.204 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|++++|||.||++++ +....+..+..++..||++ ..++++++ .+|++++.+|..|..+|++
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~s 98 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVAS 98 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHC
Confidence 4699999999999999999999999998874 3222233468899999998 47789999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..++|||+++|.+|.
T Consensus 99 G~~~~vLvvg~e~~s~ 114 (385)
T PRK12578 99 GLVDMAIAVGVDKMTE 114 (385)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 78
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.20 E-value=7.3e-11 Score=117.56 Aligned_cols=95 Identities=13% Similarity=0.305 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHhC-CCCcCCcCEEEEeee-cCCCCCcHHHH-HHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKH-KINPKSIDILVTNCS-IFCPTPSISSM-IINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~a-g~~~~dId~li~~s~-~~~~~p~~a~~-l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
..+|+.+|++++|+++ |++++|||.||++++ ++...+....+ +...+|++..+++++|+ .+|++++.|+..|..+|
T Consensus 31 ~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I 109 (399)
T PRK09052 31 PDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAADRI 109 (399)
T ss_pred HHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHH
Confidence 5799999999999997 999999999999864 45444444444 55666997458999999 49999999999999999
Q ss_pred HcCCCCeEEEEeeccccCC
Q 044359 155 KVHKNSLALVLSMEAISSN 173 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~~ 173 (401)
++|..++|||+++|.+|..
T Consensus 110 ~sG~~d~vLv~G~E~mS~~ 128 (399)
T PRK09052 110 RVGEADVMIAAGVESMSMV 128 (399)
T ss_pred HCCCCCEEEEEEEeccccC
Confidence 9999999999999998853
No 79
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.20 E-value=2.3e-09 Score=106.16 Aligned_cols=296 Identities=14% Similarity=0.136 Sum_probs=171.0
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCc-eecC-CCcc-CCCCCCChHHHHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDE-SCIP-LNLH-EMQPDVSLKRSREE 77 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R-~~~~-~~~~-~~~~~~~l~~~~~~ 77 (401)
+.+|.|+|+|..-|-. . .+|+.+.+.. + ++||..- .+.. +... ....... ..
T Consensus 1 ~~rVvITG~G~vsp~G---~-~~~~~~~l~~-G---------------~sgi~~~~~~~~~~~~~~~~~~~~~-----~~ 55 (381)
T PRK05952 1 MMKVVVTGIGLVSALG---D-LEQSWQRLLQ-G---------------KSGIKLHQPFPELPPLPLGLIGNQP-----SS 55 (381)
T ss_pred CCeEEEEeeEEECccc---C-HHHHHHHHHc-C---------------CCCeEeCCcccccccccceeecccc-----cc
Confidence 5689999999999988 6 7888876532 1 1233210 0100 0000 0000000 01
Q ss_pred HHHHHHHHHHHHHHhCCCCc--CCcCEEEEeee-cC--------------------C--------CCC-cHHHHHHHHcC
Q 044359 78 TEEVLCTIVKDLLSKHKINP--KSIDILVTNCS-IF--------------------C--------PTP-SISSMIINKFG 125 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~--~dId~li~~s~-~~--------------------~--------~~p-~~a~~l~~~LG 125 (401)
...++..|+++||+++|+++ +++.. +++|+ .. . .+| ..+..++..+|
T Consensus 56 ~~~~~~~a~~~Al~dagl~~~~~~~Gv-~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~ 134 (381)
T PRK05952 56 LEDLTKTVVTAALKDAGLTPPLTDCGV-VIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIG 134 (381)
T ss_pred ccHHHHHHHHHHHHhcCCCCCCCCEEE-EEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhC
Confidence 12466689999999999964 45544 44432 10 0 112 24677899999
Q ss_pred CCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeecc-ccCC----------CC------CCCCcchhhhhhc
Q 044359 126 FRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEA-ISSN----------GY------TGSTKSMLISNTV 188 (401)
Q Consensus 126 l~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~-~s~~----------~~------~~~d~~~~i~~~l 188 (401)
+. -+.+.+. .+|++++.||..|.++|++|..+.+||.++|. .+.. +. ++.++ ..++
T Consensus 135 ~~--Gp~~ti~-~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r----~G~v 207 (381)
T PRK05952 135 TQ--GPVLAPM-AACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQR----EGLV 207 (381)
T ss_pred CC--Ccccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCC----CCcc
Confidence 96 4788999 59999999999999999999999999999996 3211 00 11223 3578
Q ss_pred ccccceEEEEecCCCCcc--ccce-EEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCC
Q 044359 189 FRMGGAAILLSNRQQDKH--IAKY-KLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGP 265 (401)
Q Consensus 189 fGDGAaA~ll~~~~~~~~--~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 265 (401)
+||||+++||++.+.... ...+ ++.+ ....+|+... ..+ ..+. ....+.++..+++
T Consensus 208 ~gEGaa~lvLe~~~~A~~rg~~i~a~I~g---~~~~~d~~~~---~~~-----------~~~~-~~~~~ai~~Al~~--- 266 (381)
T PRK05952 208 LGEGGAILVLESAELAQKRGAKIYGQILG---FGLTCDAYHM---SAP-----------EPDG-KSAIAAIQQCLAR--- 266 (381)
T ss_pred ccccEEEEEEeeHHHHHhCCCceEEEEEE---EEecCCCCCC---CCC-----------CCCH-HHHHHHHHHHHHH---
Confidence 999999999998653211 1112 2222 1112222110 000 0000 0111112111111
Q ss_pred CCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHH-----HHHHcCCCchhhhhhHHHHhhhcCcccch
Q 044359 266 HVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDA-----VEENLKLSKEDGEASRMTLYRFGNTSSSS 340 (401)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~-----~~~~lgi~~e~~~~s~~~~~~~Gn~~sas 340 (401)
+++. ++|||++-.|-.+....+. +.+.++ +++.. ..+-..+||+.+|+
T Consensus 267 --------------------agi~---p~dId~i~~hgtgt~~~D~~E~~al~~~fg---~~~~v-~s~K~~~GH~~~Aa 319 (381)
T PRK05952 267 --------------------SGLT---PEDIDYIHAHGTATRLNDQREANLIQALFP---HRVAV-SSTKGATGHTLGAS 319 (381)
T ss_pred --------------------hCCC---HHHeeEEEccCCCCCCCcHHHHHHHHHHcC---CCCee-ecchhhhccChHHH
Confidence 3555 7899999999877655443 344555 22321 24557799999998
Q ss_pred HHHHHHH---HHHcCCCCC---------------------CCeEEEEeeccchhhcceeee
Q 044359 341 YWYELCY---LEAKGKVKK---------------------GDRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 341 i~~~L~~---~~~~g~l~~---------------------Gd~vll~~~G~G~s~~~~~l~ 377 (401)
-.+.+.. .++++.+.| =++++..+||.|-+-++++++
T Consensus 320 G~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 320 GALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred HHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 7666654 344554433 145677888888777777775
No 80
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.20 E-value=7.7e-09 Score=103.19 Aligned_cols=206 Identities=15% Similarity=0.090 Sum_probs=126.0
Q ss_pred CcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCC---------------C-CC
Q 044359 114 PSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNG---------------Y-TG 177 (401)
Q Consensus 114 p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~---------------~-~~ 177 (401)
+..+..++..||+. .+.+.+. .+|++++.||..|.++|++|..++|||+++|..+... . ++
T Consensus 137 ~~~a~~ia~~lgl~--Gp~~~i~-~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLS--GPAYTIS-TACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCC--CCccccc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 34678899999996 4889999 5999999999999999999999999999999643310 0 11
Q ss_pred CCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHH
Q 044359 178 STKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALR 257 (401)
Q Consensus 178 ~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 257 (401)
.++ ..+++||||+++||++.... ..++.+. ....|+.. ...+ ..+... ..+.++
T Consensus 214 ~~~----~G~~~gEGaa~vVLe~~~~~----~~~I~g~---g~~~d~~~---~~~~-----------~~~~~~-~~~a~~ 267 (392)
T PRK09185 214 ANR----DGINIGEAAAFFLLEREDDA----AVALLGV---GESSDAHH---MSAP-----------HPEGLG-AILAMQ 267 (392)
T ss_pred CCC----CccceeceEEEEEEEEcCCC----cEEEEEE---EEeCCCCC---CCCC-----------CCCHHH-HHHHHH
Confidence 222 35889999999999997322 2234332 11122110 0000 000000 011111
Q ss_pred HHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHH-----HHHHHcCCCchhhhhhHHHHhh
Q 044359 258 INISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIID-----AVEENLKLSKEDGEASRMTLYR 332 (401)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~-----~~~~~lgi~~e~~~~s~~~~~~ 332 (401)
+.+++ +++. ++|||++.+|-.+....+ .+.+.++-. -.+ -.+-..
T Consensus 268 ~Al~~-----------------------Agl~---~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~-~pv---~s~K~~ 317 (392)
T PRK09185 268 QALAD-----------------------AGLA---PADIGYINLHGTATPLNDAMESRAVAAVFGDG-VPC---SSTKGL 317 (392)
T ss_pred HHHHH-----------------------cCCC---HHHccEEEeCCCCCcCCCHHHHHHHHHHhCCC-Cce---eCCCcc
Confidence 11111 3555 799999999998765433 344455521 112 133456
Q ss_pred hcCcccchHHHHHHHH---HHcCCCCC------------------------CCeEEEEeeccchhhcceeeee
Q 044359 333 FGNTSSSSYWYELCYL---EAKGKVKK------------------------GDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 333 ~Gn~~sasi~~~L~~~---~~~g~l~~------------------------Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
+||+.+|+=.+.|... +++|.+.| -.+++.-+||.|-+-++++|+.
T Consensus 318 ~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 318 TGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred cccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEe
Confidence 8999998866555432 33333211 2457788899888888888874
No 81
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.20 E-value=4.4e-09 Score=105.53 Aligned_cols=186 Identities=10% Similarity=0.067 Sum_probs=114.7
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceec-CCCcc--CCCCCCChHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCI-PLNLH--EMQPDVSLKRSREET 78 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~~--~~~~~~~l~~~~~~~ 78 (401)
++|.|+|+|...|.. .+.+++.+.+.. ++..-.. +.+ ++......+... .++.. .+.+.... ......
T Consensus 4 ~~VvItG~g~~~p~g---~~~~~~w~~L~~-g~s~i~~---~~~-~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~d~~ 74 (414)
T PRK08722 4 RRVVVTGMGMLSPVG---NTVESSWKALLA-GQSGIVN---IEH-FDTTNFSTRFAGLVKDFNCEEYMSKKDA-RKMDLF 74 (414)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHh-CCCeeee---cCc-cccccCCCceeEEcCCCChhHcCCHHHH-hhcCHH
Confidence 479999999999998 688998887542 1100000 000 111111111110 00000 00000000 001123
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcC----EEEEeee-cCC-------------------------CCC-cHHHHHHHHcCCC
Q 044359 79 EEVLCTIVKDLLSKHKINPKSID----ILVTNCS-IFC-------------------------PTP-SISSMIINKFGFR 127 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId----~li~~s~-~~~-------------------------~~p-~~a~~l~~~LGl~ 127 (401)
..++..|+++||+++|+++.+.+ .|+++++ .++ ..+ ..+.++...+|++
T Consensus 75 ~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~ 154 (414)
T PRK08722 75 IQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLR 154 (414)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCC
Confidence 46889999999999999754332 3444442 110 112 2677899999996
Q ss_pred CCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------CC-----C-------CCCcchhh
Q 044359 128 SNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------GY-----T-------GSTKSMLI 184 (401)
Q Consensus 128 ~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~-----~-------~~d~~~~i 184 (401)
-+.+.+. .+|++++.||..|.++|++|..+.+||.++|..... +. + +.++
T Consensus 155 --Gp~~ti~-~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~---- 227 (414)
T PRK08722 155 --GPNIAIS-TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDR---- 227 (414)
T ss_pred --CCccccc-cccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCC----
Confidence 5888899 599999999999999999999999999999975321 10 0 1122
Q ss_pred hhhcccccceEEEEecCCC
Q 044359 185 SNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 185 ~~~lfGDGAaA~ll~~~~~ 203 (401)
..++.||||+++||++.+.
T Consensus 228 ~G~~~gEGaaalvLe~~~~ 246 (414)
T PRK08722 228 DGFVLGDGAGMMVLEEYEH 246 (414)
T ss_pred CceEeeceEEEEEEccHHH
Confidence 3678999999999998654
No 82
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.19 E-value=8.8e-11 Score=118.16 Aligned_cols=94 Identities=15% Similarity=0.352 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|++++|||.||+++. +....++.+..++..+|++.++++++++ .+|++++.++..|.++|++
T Consensus 27 ~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~~CaSg~~al~~A~~~I~s 105 (426)
T PRK08170 27 ASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ-RNCASGMQALDSAAANIAL 105 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc-chhhHHHHHHHHHHHHHHC
Confidence 5799999999999999999999999998864 3223456778899999996568999999 4999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..++||++++|.+|.
T Consensus 106 G~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 106 GRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999999876
No 83
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.18 E-value=5.8e-09 Score=104.39 Aligned_cols=187 Identities=11% Similarity=0.113 Sum_probs=115.7
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecC-CCcc--CCCCCCChHHHHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIP-LNLH--EMQPDVSLKRSREE 77 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~-~~~~--~~~~~~~l~~~~~~ 77 (401)
|++|.|+|+|...|-. .+.+++.+.+.. ++..-.. +.+.-...+...+.... ++.. +..+.... .....
T Consensus 1 m~~VvITG~g~vtp~G---~~~~~~~~~L~~-g~s~i~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-r~~~~ 72 (405)
T PRK09116 1 MRRVVVTGMGGVTALG---EDWQTIAARLKA-GRNAVRR---MPEWDRYDGLNTRLAAPIDDFELPAHYTRKKI-RSMGR 72 (405)
T ss_pred CCCEEEEeeEEECCCC---CCHHHHHHHHHc-CCCCEEe---CCchhhccCCCCceEEEecCcChhHhcCHHHH-hhCCH
Confidence 3689999999999998 699999987642 1110000 00100001333332111 1000 00000000 01122
Q ss_pred HHHHHHHHHHHHHHhCCCCc------CCcCEEEEeeec-C-----------------C--------CCCc-HHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINP------KSIDILVTNCSI-F-----------------C--------PTPS-ISSMIINKF 124 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~------~dId~li~~s~~-~-----------------~--------~~p~-~a~~l~~~L 124 (401)
...|+..|+++||+++|+.. +++ .++++++. . . .+|+ .+.+|+..+
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRM-GIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFF 151 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcE-EEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHh
Confidence 45799999999999999842 233 34444321 0 0 1232 567889999
Q ss_pred CCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC----------C-----C-------CCCCcch
Q 044359 125 GFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN----------G-----Y-------TGSTKSM 182 (401)
Q Consensus 125 Gl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~----------~-----~-------~~~d~~~ 182 (401)
|+. -+.+.+. .+|++++.||..|.++|++|..+.+||.++|..+.. . . ++.++
T Consensus 152 ~~~--Gp~~ti~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~-- 226 (405)
T PRK09116 152 GLK--GRVIPTS-SACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR-- 226 (405)
T ss_pred CCC--CCccccc-chhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC--
Confidence 996 5888899 599999999999999999999999999999974321 0 0 01223
Q ss_pred hhhhhcccccceEEEEecCCC
Q 044359 183 LISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 183 ~i~~~lfGDGAaA~ll~~~~~ 203 (401)
..+++|+||+++||++.+.
T Consensus 227 --~G~v~gEGa~~~vLe~~~~ 245 (405)
T PRK09116 227 --DGLVIGEGAGTLVLEELEH 245 (405)
T ss_pred --CCEeeeccEEEEEEccHHH
Confidence 3688999999999997543
No 84
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=99.17 E-value=1.3e-10 Score=109.48 Aligned_cols=96 Identities=17% Similarity=0.278 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
+.+|+.+|++.+|+++++++++||.|++++. +....+..+..++-..|++..++++.|+ ..|+|++.|+..|...|++
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I~s 104 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAIAS 104 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhhcC
Confidence 6799999999999999999999999999984 4444677888888999998889999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccCCC
Q 044359 157 HKNSLALVLSMEAISSNG 174 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~~~ 174 (401)
|..+.+|++++|.+|...
T Consensus 105 G~~dvvlagGvE~mS~~p 122 (264)
T PF00108_consen 105 GEADVVLAGGVESMSRVP 122 (264)
T ss_dssp TS-SEEEEEEEEETTTSC
T ss_pred CCccEEEEeccccccccc
Confidence 999999999999998764
No 85
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.17 E-value=1.5e-09 Score=107.78 Aligned_cols=93 Identities=13% Similarity=0.268 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-c-CCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-I-FCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~-~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
..+|+.+|+++||+++|++++|||.+++++. . ....+..+....-.+|++..++.+.++ .+|++++.++..|.+.|+
T Consensus 26 ~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I~ 104 (382)
T PRK07801 26 PADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAVM 104 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHHH
Confidence 4699999999999999999999999998753 1 111233444444467776568889999 599999999999999999
Q ss_pred cCCCCeEEEEeecccc
Q 044359 156 VHKNSLALVLSMEAIS 171 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s 171 (401)
+|..+.|||++.|.+|
T Consensus 105 sG~~d~vLv~G~e~ms 120 (382)
T PRK07801 105 SGTQDLVVAGGVQNMS 120 (382)
T ss_pred CCCCCEEEEcchhhhc
Confidence 9999999999999664
No 86
>PRK06059 lipid-transfer protein; Provisional
Probab=99.17 E-value=1.2e-10 Score=116.28 Aligned_cols=93 Identities=11% Similarity=0.157 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-c-CCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-I-FCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~-~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
..+|+.+|+++||+++|++++|||.||++++ + ++..+..+..+++.||+. .++++++++ +|++++.+|..|.++|+
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~~-~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSYA-ACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceecccc-hhHHHHHHHHHHHHHHH
Confidence 3699999999999999999999999998763 3 333455678899999997 588999994 99999999999999999
Q ss_pred cCCCCeEEEEeeccccC
Q 044359 156 VHKNSLALVLSMEAISS 172 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~ 172 (401)
+|..++|||+++|.+|.
T Consensus 101 sG~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 101 AGLCDVALVVGADTTPK 117 (399)
T ss_pred CCCCCEEEEEEEcccCC
Confidence 99999999999998764
No 87
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.15 E-value=1.6e-09 Score=109.33 Aligned_cols=187 Identities=12% Similarity=0.180 Sum_probs=114.9
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceec-CCCcc-----CCCCCC--ChHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCI-PLNLH-----EMQPDV--SLKR 73 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~~-----~~~~~~--~l~~ 73 (401)
++|.|+|+|...|.. .+.+++.+.+.. +......+. . ++......+... .++.. .+.++. +.+.
T Consensus 4 ~~V~ItG~g~~~p~g---~~~~~~w~~l~~-G~s~i~~~~---~-~~~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~~~ 75 (424)
T PRK06333 4 KRIVVTGMGAVSPLG---CGVETFWQRLLA-GQSGIRTLT---D-FPVGDLATKIGGQVPDLAEDAEAGFDPDRYLDPKD 75 (424)
T ss_pred CCEEEEcceEECCCC---CCHHHHHHHHHc-CCCeEEeCC---c-ccccCCCCceEEEeccccccccccCChhHcCCHHH
Confidence 479999999999998 688999887643 211100000 0 000011111100 00000 000100 0000
Q ss_pred --HHHHHHHHHHHHHHHHHHhCCCCcCCc-C----EEEEeeec-C---------------------CCC----C-cHHHH
Q 044359 74 --SREETEEVLCTIVKDLLSKHKINPKSI-D----ILVTNCSI-F---------------------CPT----P-SISSM 119 (401)
Q Consensus 74 --~~~~~~~la~~Aa~~aL~~ag~~~~dI-d----~li~~s~~-~---------------------~~~----p-~~a~~ 119 (401)
.......|+..|+++||+++|++++++ + .++++++. + +.. + ..+.+
T Consensus 76 ~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 155 (424)
T PRK06333 76 QRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGH 155 (424)
T ss_pred HhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHH
Confidence 112345789999999999999987766 2 44554421 1 001 1 23567
Q ss_pred HHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------C----C--------C
Q 044359 120 IINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------G----Y--------T 176 (401)
Q Consensus 120 l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~----~--------~ 176 (401)
|...+|+. -+.+.+. .+|++++.||..|..+|++|..+.+||+++|.+... + . +
T Consensus 156 is~~~gl~--Gp~~~v~-~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~P 232 (424)
T PRK06333 156 VSIRYGFK--GPLGAPV-TACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRP 232 (424)
T ss_pred HHHHhCCC--CCCcccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCC
Confidence 88999995 5888888 599999999999999999999999999999973210 0 0 0
Q ss_pred -CCCcchhhhhhcccccceEEEEecCCC
Q 044359 177 -GSTKSMLISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 177 -~~d~~~~i~~~lfGDGAaA~ll~~~~~ 203 (401)
+.++ ..++.||||+++||++.+.
T Consensus 233 fd~~~----~G~~~gEGaa~lvLe~~~~ 256 (424)
T PRK06333 233 FDRDR----DGFVMGEGAGILVIETLEH 256 (424)
T ss_pred CCCCC----CCeEEecceEEEEEeeHHH
Confidence 1122 3577999999999998543
No 88
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.13 E-value=6.7e-09 Score=103.79 Aligned_cols=185 Identities=12% Similarity=0.108 Sum_probs=113.2
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceec-CCCcc--CCCCCCChHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCI-PLNLH--EMQPDVSLKRSREET 78 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~~--~~~~~~~l~~~~~~~ 78 (401)
.+|.|+|+|...|.- .+.+++.+.+.. ++..-.. +.+ +...+...+.-. .++.. ...+.... ......
T Consensus 1 ~~VvItG~G~vsp~G---~~~~~~w~~L~~-G~s~i~~---~~~-~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~d~~ 71 (399)
T cd00832 1 RRAVVTGIGVVAPNG---LGVEEYWKAVLD-GRSGLGP---ITR-FDPSGYPARLAGEVPDFDAAEHLPGRLL-PQTDRM 71 (399)
T ss_pred CCEEEEeeEEeCCCC---CCHHHHHHHHHh-CCCeEee---CCc-cccccCCCceeEEeCCcChhhcCCHHHH-hhCCHH
Confidence 368999999999998 688999887642 1110000 000 001111111100 00000 00000000 011234
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcC----EEEEeeec-CC-----------------CC--------C-cHHHHHHHHcCCC
Q 044359 79 EEVLCTIVKDLLSKHKINPKSID----ILVTNCSI-FC-----------------PT--------P-SISSMIINKFGFR 127 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~-~~-----------------~~--------p-~~a~~l~~~LGl~ 127 (401)
..|+..|+++||+++|+++++++ .|+++++. ++ .. + ..+.+|...+|+.
T Consensus 72 ~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~ 151 (399)
T cd00832 72 TRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMR 151 (399)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCC
Confidence 67999999999999999866543 34444321 10 00 1 2456788999996
Q ss_pred CCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccC-----------CCC-----------CCCCcchhhh
Q 044359 128 SNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISS-----------NGY-----------TGSTKSMLIS 185 (401)
Q Consensus 128 ~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~-----------~~~-----------~~~d~~~~i~ 185 (401)
-+++.+. .+|++++.||..|.++|++|. +.+|+.++|.... .+. ++.++ .
T Consensus 152 --Gp~~ti~-~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~----~ 223 (399)
T cd00832 152 --GPSGVVV-AEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA----A 223 (399)
T ss_pred --CCccccc-chhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC----C
Confidence 5888888 599999999999999999999 9999999987321 000 01122 3
Q ss_pred hhcccccceEEEEecCCC
Q 044359 186 NTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 186 ~~lfGDGAaA~ll~~~~~ 203 (401)
.+++|+||+++||++.+.
T Consensus 224 G~~~gEGa~~lvLe~~~~ 241 (399)
T cd00832 224 GYVPGEGGAILVLEDAAA 241 (399)
T ss_pred CEeeeceEEEEEEeeHHH
Confidence 688999999999998654
No 89
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.13 E-value=1.4e-08 Score=102.67 Aligned_cols=119 Identities=13% Similarity=0.107 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHhCCCCc-----CCcCEEEEeeec-CC-------------------------CCC-cHHHHHHHHcC
Q 044359 78 TEEVLCTIVKDLLSKHKINP-----KSIDILVTNCSI-FC-------------------------PTP-SISSMIINKFG 125 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~-----~dId~li~~s~~-~~-------------------------~~p-~~a~~l~~~LG 125 (401)
...|+..|+.+||+++|+++ .+.+.++++++. .. ..+ ..+.+|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 45799999999999999854 245667776531 10 011 24567899999
Q ss_pred CCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------C------------C-CCCCcc
Q 044359 126 FRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------G------------Y-TGSTKS 181 (401)
Q Consensus 126 l~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~------------~-~~~d~~ 181 (401)
+. -+.+.+. .+|++++.||..|..+|++|..+.+||.++|..... + . ++.++
T Consensus 173 l~--Gp~~tv~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~- 248 (437)
T PLN02836 173 FQ--GPNHAAV-TACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR- 248 (437)
T ss_pred CC--Cceecee-ChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC-
Confidence 86 5889999 499999999999999999999999999998863110 0 0 01122
Q ss_pred hhhhhhcccccceEEEEecCCC
Q 044359 182 MLISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 182 ~~i~~~lfGDGAaA~ll~~~~~ 203 (401)
..+++||||+|+||++.+.
T Consensus 249 ---~G~~~gEGaaalVLe~~~~ 267 (437)
T PLN02836 249 ---DGFVIGEGAGVLVLEELEH 267 (437)
T ss_pred ---CCeeeecCEEEEEEeeHHH
Confidence 3578999999999998653
No 90
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.13 E-value=2.3e-10 Score=113.62 Aligned_cols=91 Identities=12% Similarity=0.038 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCC--CCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCP--TPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~--~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
..+|+.+|+++||+++|++++|||.+|+++.++.. .+..+..+++.||+. ..+++++.+ ||+++..+|..|.++|+
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~~-~gasG~~al~~A~~~I~ 106 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVYV-GGATGVMTAIAGWYHVA 106 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEec-CchhHHHHHHHHHHHHh
Confidence 46999999999999999999999999987643322 455778899999997 489999995 99999999999999999
Q ss_pred cCCCCeEEEEeeccc
Q 044359 156 VHKNSLALVLSMEAI 170 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~ 170 (401)
+|..++||||++|++
T Consensus 107 sG~ad~vLVvg~e~~ 121 (392)
T PRK06065 107 SGLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCCEEEEEEeecc
Confidence 999999999999985
No 91
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.13 E-value=2.2e-10 Score=114.20 Aligned_cols=94 Identities=13% Similarity=0.240 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
+.+|+.+|++++|+++|++++|||.+|++++ ++....+.+......+|++.++++++|+ .+|+|++.|+..|.++|++
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~s 109 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLVA 109 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHHC
Confidence 5799999999999999999999999999864 3333333444455567777569999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..+.+|++++|.+|.
T Consensus 110 G~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 110 GSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCEEEEEeeeccCC
Confidence 9999999999999985
No 92
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.11 E-value=3.5e-10 Score=112.61 Aligned_cols=94 Identities=11% Similarity=0.152 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHH-HHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISS-MIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~-~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
+.+|+.+|+++||++++++|++||.||+++. ++...+..+. .+++.+|+. ++++++|+ .+|+|++.++..|..+|+
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~-~~Casg~~al~~A~~~I~ 100 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMN-NLCGSGLRALALAMQLIA 100 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEec-chhHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999998874 4433455555 377888887 68999999 599999999999999999
Q ss_pred cCCCCeEEEEeeccccCC
Q 044359 156 VHKNSLALVLSMEAISSN 173 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~~ 173 (401)
+|..+++||+++|.+|..
T Consensus 101 sG~~~~vlv~g~e~~s~~ 118 (393)
T cd00826 101 GGDANCILAGGFEKMETS 118 (393)
T ss_pred CCCCCEEEEEeeeccccC
Confidence 999999999999998753
No 93
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.09 E-value=8.6e-09 Score=103.82 Aligned_cols=252 Identities=12% Similarity=0.048 Sum_probs=148.2
Q ss_pred HHHHHHHHHHHHHHHhCCCC-cCCcCE----EEEeee-cCC-----------------C--------CC-cHHHHHHHHc
Q 044359 77 ETEEVLCTIVKDLLSKHKIN-PKSIDI----LVTNCS-IFC-----------------P--------TP-SISSMIINKF 124 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~-~~dId~----li~~s~-~~~-----------------~--------~p-~~a~~l~~~L 124 (401)
...+|+..|+++||+++|++ +++++. ++++++ .+. . .+ ..+.+|...+
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 35689999999999999998 666653 333322 110 0 01 2456788889
Q ss_pred CCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------C------C-------CCCCc
Q 044359 125 GFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------G------Y-------TGSTK 180 (401)
Q Consensus 125 Gl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~------~-------~~~d~ 180 (401)
|+. -+.+.+. .+|++++.||..|..+|++|..+.+||.++|..... + + ++.++
T Consensus 156 ~l~--Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~ 232 (421)
T PTZ00050 156 KLK--GPSGSAV-TACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR 232 (421)
T ss_pred CCC--Ccccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC
Confidence 986 4788888 599999999999999999999999999999963210 0 0 01222
Q ss_pred chhhhhhcccccceEEEEecCCCCccccceEEee-eeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHH
Q 044359 181 SMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKH-LVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRIN 259 (401)
Q Consensus 181 ~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 259 (401)
..+++||||+|+||++.+....+ +-++.. +.......|+.. +..+. .+. ....+.++..
T Consensus 233 ----~G~~~gEGAaalvLe~~~~A~~~-g~~i~a~i~g~~~~~d~~~---~~~p~-----------~~~-~~~~~ai~~A 292 (421)
T PTZ00050 233 ----AGFVMGEGAGILVLEELEHALRR-GAKIYAEIRGYGSSSDAHH---ITAPH-----------PDG-RGARRCMENA 292 (421)
T ss_pred ----CCEeeccceEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC---CCCCC-----------CCh-HHHHHHHHHH
Confidence 35789999999999986542211 111111 111111122110 00000 000 0011112221
Q ss_pred HHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHH-----HHHHHHcCCCc-hhhhhhHHHHhhh
Q 044359 260 ISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAII-----DAVEENLKLSK-EDGEASRMTLYRF 333 (401)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~-----~~~~~~lgi~~-e~~~~s~~~~~~~ 333 (401)
+++ . +++. ++|||++-+|-.+.... +.+.+.++-.. +.+.. -.+-..+
T Consensus 293 l~~---------------------~-Agi~---~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v-~s~K~~~ 346 (421)
T PTZ00050 293 LKD---------------------G-ANIN---INDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYV-SSTKGGL 346 (421)
T ss_pred HHh---------------------c-cCCC---hhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceE-ECccccc
Confidence 111 0 1454 78999999998776443 34455555321 22221 1344578
Q ss_pred cCcccchHHHHHHHH---HHcCCCCC--------------------------CCeEEEEeeccchhhcceeee
Q 044359 334 GNTSSSSYWYELCYL---EAKGKVKK--------------------------GDRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 334 Gn~~sasi~~~L~~~---~~~g~l~~--------------------------Gd~vll~~~G~G~s~~~~~l~ 377 (401)
||+.+|+=.+.|... ++++.+.| =..++..+||-|-+-++++|+
T Consensus 347 GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~ 419 (421)
T PTZ00050 347 GHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFT 419 (421)
T ss_pred cccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEe
Confidence 999988876666543 44443221 145678889988888888886
No 94
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.09 E-value=1.7e-08 Score=103.79 Aligned_cols=185 Identities=14% Similarity=0.109 Sum_probs=113.2
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCC--ChHH--HHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDV--SLKR--SREE 77 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~--~l~~--~~~~ 77 (401)
++|.|+|+|...|-- .+.+++.+.+.. +.-.-.. +++ +....+..| +... ...+.++. .-+. ....
T Consensus 129 ~rVvITG~G~vtp~G---~~~~~~w~~L~~-G~s~i~~---~~~-f~~~~~~~~-~ag~-i~~f~~~~~l~~k~~r~md~ 198 (540)
T PLN02787 129 RRVVVTGMGVVSPLG---HDPDVFYNNLLE-GVSGISE---IER-FDCSQFPTR-IAGE-IKSFSTDGWVAPKLSKRMDK 198 (540)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHc-CCCcccc---cCc-cchhhCCcc-cccc-ccccChhhcCCHHHHHhCCH
Confidence 469999999999998 688999887642 1110000 000 001111111 1000 00000000 0000 1112
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCc-------CEEEEeeec-CC------------------------CCC-cHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSI-------DILVTNCSI-FC------------------------PTP-SISSMIINKF 124 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dI-------d~li~~s~~-~~------------------------~~p-~~a~~l~~~L 124 (401)
...++..|+++||+++|++++.+ ..|++++.. +. ..+ ..+..|+..+
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~ 278 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDL 278 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHh
Confidence 45688999999999999976422 135555431 10 011 1356788999
Q ss_pred CCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccc-cCC----------C-----------CC-CCCcc
Q 044359 125 GFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAI-SSN----------G-----------YT-GSTKS 181 (401)
Q Consensus 125 Gl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~-s~~----------~-----------~~-~~d~~ 181 (401)
|+. -+.+.+. .+|++++.||..|.++|++|..+.+||.++|.. +.. + .+ +.++
T Consensus 279 gl~--Gp~~tis-tACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r- 354 (540)
T PLN02787 279 GWM--GPNYSIS-TACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR- 354 (540)
T ss_pred CCC--CCccccc-cccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC-
Confidence 996 5888999 599999999999999999999999999999962 110 0 00 1223
Q ss_pred hhhhhhcccccceEEEEecCCC
Q 044359 182 MLISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 182 ~~i~~~lfGDGAaA~ll~~~~~ 203 (401)
..+++|+||+++||++.+.
T Consensus 355 ---dGfv~GEGAa~lVLE~~e~ 373 (540)
T PLN02787 355 ---DGFVMGEGAGVLLLEELEH 373 (540)
T ss_pred ---CCcccccceEEEEEeeHHH
Confidence 3688999999999997543
No 95
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.09 E-value=8.3e-09 Score=103.16 Aligned_cols=186 Identities=8% Similarity=0.122 Sum_probs=116.7
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCcc--CCCCCCChHHHHHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLH--EMQPDVSLKRSREET 78 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~--~~~~~~~l~~~~~~~ 78 (401)
++.|.|+|+|..-|-. .+.+++.+.+.. ++..-.. ..+ +...+...+.....+.. +..+. .........
T Consensus 1 m~rVvITG~G~vsp~G---~~~~~~w~~l~~-G~sgi~~---~~~-~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~r~ 71 (406)
T PRK07967 1 MRRVVITGLGIVSSIG---NNQQEVLASLRE-GRSGITF---SPE-FAEMGMRSQVWGNVKLDPTGLIDR-KVMRFMGDA 71 (406)
T ss_pred CCcEEEEcceEECCCC---CCHHHHHHHHHc-CCCceeE---CCc-ccccCCCCceEEEcCCChhhcCCH-HHhhcCCHH
Confidence 3689999999999998 799999987642 1110000 000 12233333322211110 00000 000111234
Q ss_pred HHHHHHHHHHHHHhCCCCcCC-----cCEEEEeee-cC------------------C--------CCC-cHHHHHHHHcC
Q 044359 79 EEVLCTIVKDLLSKHKINPKS-----IDILVTNCS-IF------------------C--------PTP-SISSMIINKFG 125 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~d-----Id~li~~s~-~~------------------~--------~~p-~~a~~l~~~LG 125 (401)
..++..|+++||+++|+++.+ ++. +++++ .. . ..+ ..+.+|...+|
T Consensus 72 ~~~a~~aa~~Al~dAGl~~~~~~~~rvGv-~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 72 SAYAYLAMEQAIADAGLSEEQVSNPRTGL-IAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCEEE-EEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 578999999999999987543 433 33331 11 0 011 25678999999
Q ss_pred CCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC----C-------------------CCCCCcch
Q 044359 126 FRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN----G-------------------YTGSTKSM 182 (401)
Q Consensus 126 l~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~----~-------------------~~~~d~~~ 182 (401)
++ -+.+.+. .+|++++.||..|.++|++|..+.+||.++|..+.. + .++.++
T Consensus 151 l~--Gp~~tvs-~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r-- 225 (406)
T PRK07967 151 IK--GVNYSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANR-- 225 (406)
T ss_pred CC--CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCC--
Confidence 96 5788889 599999999999999999999999999999864321 0 011223
Q ss_pred hhhhhcccccceEEEEecCCC
Q 044359 183 LISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 183 ~i~~~lfGDGAaA~ll~~~~~ 203 (401)
..++.|+||+++||++.+.
T Consensus 226 --~G~v~gEGaa~lvLe~~~~ 244 (406)
T PRK07967 226 --DGFVIAGGGGVVVVEELEH 244 (406)
T ss_pred --CceeeeceEEEEEEeeHHH
Confidence 3578999999999998543
No 96
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.05 E-value=5.9e-08 Score=97.53 Aligned_cols=315 Identities=11% Similarity=0.081 Sum_probs=174.5
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCce--ecCCCccCCCCCCChHHH--HHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDES--CIPLNLHEMQPDVSLKRS--REE 77 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~--~~~~~~~~~~~~~~l~~~--~~~ 77 (401)
+.|.|+|+|...|.- .+.+++.+.+.. ++-.-.... ++.....++..+. +..++.. +..+-+.. ...
T Consensus 12 ~~VvItGig~~sp~g---~~~~~~w~~L~~-G~s~i~~~~--~~~~~~~~~~~~~~g~i~~~~d---~~~~~~~~~~~d~ 82 (418)
T PRK07910 12 PNVVVTGIAMTTALA---TDAETTWKLLLD-GQSGIRTLD--DPFVEEFDLPVRIGGHLLEEFD---HQLTRVELRRMSY 82 (418)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHc-CCCeeEeCC--hhhhhccCCCcceEEEeccCcc---ccCCHHHHhhccH
Confidence 579999999999998 799999987653 111000000 0001122333331 1111111 00010111 112
Q ss_pred HHHHHHHHHHHHHHhCCC---CcCCcCEEEEeeecCC-------------------------CCC-cHHHHHHHHcCCCC
Q 044359 78 TEEVLCTIVKDLLSKHKI---NPKSIDILVTNCSIFC-------------------------PTP-SISSMIINKFGFRS 128 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~---~~~dId~li~~s~~~~-------------------------~~p-~~a~~l~~~LGl~~ 128 (401)
...++..|+++||+++|+ +++++..++-++.... ..+ ..+..+...+|+.
T Consensus 83 ~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~- 161 (418)
T PRK07910 83 LQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK- 161 (418)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCC-
Confidence 356899999999999996 4455554433221110 012 2456678888885
Q ss_pred CcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC------------CC-----C-------CCCcchhh
Q 044359 129 NIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN------------GY-----T-------GSTKSMLI 184 (401)
Q Consensus 129 ~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~------------~~-----~-------~~d~~~~i 184 (401)
-+.+.+. .+|++++.||..|.++|++|..+.+++.++|..... +. + +.++
T Consensus 162 -G~~~ti~-taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~---- 235 (418)
T PRK07910 162 -AGVITPV-SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDR---- 235 (418)
T ss_pred -CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCC----
Confidence 4678888 599999999999999999999999999999873210 10 0 1122
Q ss_pred hhhcccccceEEEEecCCCCccccceEEee-eeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhh
Q 044359 185 SNTVFRMGGAAILLSNRQQDKHIAKYKLKH-LVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQL 263 (401)
Q Consensus 185 ~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~ 263 (401)
..+++|||++++||++.+....+ +.++.. +......+|+... ..+ + .... ...+.++..++.
T Consensus 236 ~G~v~gEGaa~vvLe~~~~A~~r-g~~i~a~i~g~~~~~dg~~~---~~~-~----------~~~~-~~~~a~~~Al~~- 298 (418)
T PRK07910 236 DGFVFGEGGALMVIETEEHAKAR-GANILARIMGASITSDGFHM---VAP-D----------PNGE-RAGHAMTRAIEL- 298 (418)
T ss_pred CCEeeeceEEEEEEeeHHHHHhC-CCcEEEEEEEEEEecCCCCC---CCC-C----------CCHH-HHHHHHHHHHHH-
Confidence 36889999999999986543211 111111 1122222332110 000 0 0000 001112111111
Q ss_pred CCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHH-----HHHHHHcCCCchhhhhhHHHHhhhcCccc
Q 044359 264 GPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAII-----DAVEENLKLSKEDGEASRMTLYRFGNTSS 338 (401)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~-----~~~~~~lgi~~e~~~~s~~~~~~~Gn~~s 338 (401)
.++. ++|||++-.|-.+.... +.+.+.+|-..-.+ ..+-..+||+.+
T Consensus 299 ----------------------agi~---~~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v---~s~K~~~GH~~~ 350 (418)
T PRK07910 299 ----------------------AGLT---PGDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAV---YAPKSALGHSVG 350 (418)
T ss_pred ----------------------hCCC---HHHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCce---eCccccccccHH
Confidence 2455 79999999999776443 34556676321122 245577899998
Q ss_pred chHHHHHHH---HHHcCCCCC----------------------C--CeEEEEeeccchhhcceeee
Q 044359 339 SSYWYELCY---LEAKGKVKK----------------------G--DRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 339 asi~~~L~~---~~~~g~l~~----------------------G--d~vll~~~G~G~s~~~~~l~ 377 (401)
|+=.+.|.. ++++|.+.| + .+++.-+||.|-+-++++++
T Consensus 351 AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~ 416 (418)
T PRK07910 351 AVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFG 416 (418)
T ss_pred HHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEe
Confidence 876655432 344443221 1 34566778888777777776
No 97
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.04 E-value=1.1e-09 Score=110.65 Aligned_cols=95 Identities=16% Similarity=0.285 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCc-HHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPS-ISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~-~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
+..+|+.+|+++||+++|++++|||.+|+++. +....+. .+..++..+|++..+++++++ .+|++++.++..|..+|
T Consensus 70 s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~I 148 (452)
T PLN02287 70 YPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAI 148 (452)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHHH
Confidence 35799999999999999999999999998874 4443343 445677888998568999999 59999999999999999
Q ss_pred HcCCCCeEEEEeeccccC
Q 044359 155 KVHKNSLALVLSMEAISS 172 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~ 172 (401)
++|..+.|||+++|.+|.
T Consensus 149 ~sG~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 149 KAGFYDIGIGAGVESMTT 166 (452)
T ss_pred HcCCCCeEEEEeEEecCC
Confidence 999999999999999875
No 98
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=99.03 E-value=4e-08 Score=100.60 Aligned_cols=92 Identities=11% Similarity=0.140 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHhCCCC--cCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKIN--PKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~--~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
..+|+.+|+++||+++|++ ++|||.+++++............++++||+.+ ....... .||+++..++..|...|+
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHHH
Confidence 4699999999999999999 99999998765311112234578999999974 5555556 589999999999999999
Q ss_pred cCCCCeEEEEeecccc
Q 044359 156 VHKNSLALVLSMEAIS 171 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s 171 (401)
+|..+.|||+++|+++
T Consensus 105 sG~advVLv~G~E~~~ 120 (498)
T PRK08257 105 AGEADVALVAGAEAQS 120 (498)
T ss_pred CCCCCEEEEeeeeecc
Confidence 9999999999999753
No 99
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.99 E-value=2.3e-09 Score=106.80 Aligned_cols=95 Identities=14% Similarity=0.280 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHh-CCCCcCCcCEEEEeee-cC-CCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSK-HKINPKSIDILVTNCS-IF-CPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~-~~-~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
+.+|+.+|++++|++ +|+++++||.+|+++. +. ...+..+..++..+|++.+++++.|++ +|+|++.|+..|.++|
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~~-~CaSG~~Av~~A~~~I 104 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTINR-LCGSGMDAVGVAARAI 104 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEec-cchhHHHHHHHHHHHH
Confidence 579999999999997 5999999999999874 32 223778899999999997799999995 9999999999999999
Q ss_pred HcCCCCeEEEEeeccccCC
Q 044359 155 KVHKNSLALVLSMEAISSN 173 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~~ 173 (401)
++|..+.+|++++|.+|+.
T Consensus 105 ~sG~~divlagGvEsmS~~ 123 (400)
T PRK13359 105 KSGEAALMIAGGVESMSRA 123 (400)
T ss_pred HcCCCCEEEEeeeeccCCC
Confidence 9999999999999999874
No 100
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.99 E-value=1.5e-09 Score=109.21 Aligned_cols=95 Identities=17% Similarity=0.280 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCC-CCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFC-PTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~-~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|++++|+++|+++++||.+|++++... ..+.++..++..+|++..++++.|+ .+|++++.|+..|.++|++
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~s 107 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIMA 107 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHHC
Confidence 5799999999999999999999999999875322 2355677799999998669999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccCC
Q 044359 157 HKNSLALVLSMEAISSN 173 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~~ 173 (401)
|..+.||++++|.+|..
T Consensus 108 G~~dvvLvgG~Esms~~ 124 (428)
T PRK08963 108 GTIDIGIAGGADSSSVL 124 (428)
T ss_pred CCCCEEEEecccccCCC
Confidence 99999999999999863
No 101
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.99 E-value=2.3e-09 Score=107.21 Aligned_cols=94 Identities=15% Similarity=0.294 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHhC-CCCcCCcCEEEEeee-cC-CCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKH-KINPKSIDILVTNCS-IF-CPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~a-g~~~~dId~li~~s~-~~-~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
..+|+.+|+++||+++ |++++|||.+++++. +. ...+..+..++..+|+. .++++.++ .+|+++..++..|.++|
T Consensus 27 ~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~-~~caSG~~av~~Aa~~I 104 (406)
T PRK07851 27 PDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVN-RYCSSSLQTTRMAFHAI 104 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeee-ccchhHHHHHHHHHHHH
Confidence 4699999999999996 999999999998753 22 22355678899999996 58999999 49999999999999999
Q ss_pred HcCCCCeEEEEeeccccCC
Q 044359 155 KVHKNSLALVLSMEAISSN 173 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~~ 173 (401)
++|..+.|||+++|++|..
T Consensus 105 ~sG~~d~vLv~G~e~~s~~ 123 (406)
T PRK07851 105 KAGEGDVFISAGVETVSRF 123 (406)
T ss_pred HCCCCCEEEEeeEEecccC
Confidence 9999999999999998754
No 102
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.97 E-value=2.9e-09 Score=106.17 Aligned_cols=95 Identities=14% Similarity=0.278 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCC-CCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCP-TPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~-~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
+.+|+.+|++++|+++|+++++||.+++++. ++.. .+..+..++..+|++..++++.|++ +|++++.|+..|...|+
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~~-~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNR-LCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeeec-hhhhHHHHHHHHHHHHH
Confidence 5799999999999999999999999999874 3322 3566777889999986799999994 99999999999999999
Q ss_pred cCCCCeEEEEeeccccCC
Q 044359 156 VHKNSLALVLSMEAISSN 173 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~~ 173 (401)
+|..+.+|++++|.+|..
T Consensus 105 sG~~dvvlagG~Esms~~ 122 (401)
T PRK08131 105 CGEGDLYLAGGVESMSRA 122 (401)
T ss_pred CCCCCEEEEEEecCCCCC
Confidence 999999999999999864
No 103
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.97 E-value=3.4e-07 Score=91.23 Aligned_cols=185 Identities=14% Similarity=0.078 Sum_probs=112.9
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCC-CccCCCCCCChHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPL-NLHEMQPDVSLKRSREETEE 80 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~-~~~~~~~~~~l~~~~~~~~~ 80 (401)
++|.|+|+|...|-. .+.+++.+.+.. ++... ..+. ..+ .....+ ...+ +.....+.............
T Consensus 6 ~rVvITGiG~vsp~G---~~~e~~w~aL~~-G~sg~-~~~~-~~~---~~~~~~-~~~~~~~~~~~~~~~~~r~~~r~~~ 75 (398)
T PRK06519 6 NDVVITGIGLVSSLG---EGLDAHWNALSA-GRPQP-NVDT-ETF---APYPVH-PLPEIDWSQQIPKRGDQRQMETWQR 75 (398)
T ss_pred CCEEEEcceEECCCC---CCHHHHHHHHHc-CCCCC-CCCc-ccc---cCcCcc-cccccChhhcCCchhhhhccCHHHH
Confidence 469999999999998 799999987642 11100 0000 000 000000 0000 00000000000001123457
Q ss_pred HHHHHHHHHHHhCCCCc-----CCcCEEEEeeecCC-------------------------------------CCC-cHH
Q 044359 81 VLCTIVKDLLSKHKINP-----KSIDILVTNCSIFC-------------------------------------PTP-SIS 117 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~-----~dId~li~~s~~~~-------------------------------------~~p-~~a 117 (401)
|+..|+++||+++|++. ++++.++.++.... ..| ..+
T Consensus 76 ~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a 155 (398)
T PRK06519 76 LGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLA 155 (398)
T ss_pred HHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHH
Confidence 99999999999999854 34444443322110 011 246
Q ss_pred HHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------CC-----C--CC-
Q 044359 118 SMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------GY-----T--GS- 178 (401)
Q Consensus 118 ~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~-----~--~~- 178 (401)
..|...+|+. -+.+.+. .+|++++.||..|.++|++|..+.+||.++|..... +. + +.
T Consensus 156 ~~is~~~gl~--Gp~~ti~-~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~d~~ 232 (398)
T PRK06519 156 GNISIVHKVT--GSSRTFM-GEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVWSRG 232 (398)
T ss_pred HHHHHHhCCC--Ccccccc-CCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCchhccC
Confidence 6788899996 4889999 599999999999999999999999999999862110 10 0 01
Q ss_pred --CcchhhhhhcccccceEEEEecCCC
Q 044359 179 --TKSMLISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 179 --d~~~~i~~~lfGDGAaA~ll~~~~~ 203 (401)
++ ..++.|+||+++||++.+.
T Consensus 233 ~~~r----~G~v~GEGAa~lvLE~~~~ 255 (398)
T PRK06519 233 GEDG----GGFILGSGGAFLVLESREH 255 (398)
T ss_pred ccCC----CCeeeeceEEEEEEeeHHH
Confidence 13 4688999999999998664
No 104
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.97 E-value=4.2e-08 Score=95.80 Aligned_cols=119 Identities=11% Similarity=0.065 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHhCCC--CcCCcCEEEEeeecCC-----------------C--------CC-cHHHHHHHHcCCCCC
Q 044359 78 TEEVLCTIVKDLLSKHKI--NPKSIDILVTNCSIFC-----------------P--------TP-SISSMIINKFGFRSN 129 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~--~~~dId~li~~s~~~~-----------------~--------~p-~~a~~l~~~LGl~~~ 129 (401)
...++..|+++|++++|+ ++++++.++-++..+. . .+ ..+.+|...+|++
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~-- 81 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK-- 81 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC--
Confidence 457899999999999996 5667765553321110 0 11 2567888899996
Q ss_pred cceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------C----C---------CCCCcchhhh
Q 044359 130 IKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------G----Y---------TGSTKSMLIS 185 (401)
Q Consensus 130 ~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~----~---------~~~d~~~~i~ 185 (401)
-+.+.+. .+|++++.||..|.++|+.|..+.+||.++|..... + + ++.++ .
T Consensus 82 Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r----~ 156 (342)
T PRK14691 82 GPIGAPV-TACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTAR----D 156 (342)
T ss_pred CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCC----C
Confidence 5888888 599999999999999999999999999999873210 0 0 11223 3
Q ss_pred hhcccccceEEEEecCCC
Q 044359 186 NTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 186 ~~lfGDGAaA~ll~~~~~ 203 (401)
.+++||||+++||++.+.
T Consensus 157 G~v~gEGAa~lvLes~~~ 174 (342)
T PRK14691 157 GFVMGEGAGLLIIEELEH 174 (342)
T ss_pred CccccceEEEEEEeeHHH
Confidence 688999999999997554
No 105
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.96 E-value=2.3e-09 Score=106.45 Aligned_cols=95 Identities=15% Similarity=0.271 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
+.+|+.+|++++|+++|+++++||.+++++. ........+..++..+|++.+++++.|+ .+|++++.|+..|..+|++
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~~I~s 105 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAANSIMT 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHHHHHc
Confidence 6799999999999999999999999999864 2222446677788999998669999999 4999999999999999999
Q ss_pred CCCCeEEEEeeccccCC
Q 044359 157 HKNSLALVLSMEAISSN 173 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~~ 173 (401)
|..+.+|+++.|++|..
T Consensus 106 G~~dvvla~G~E~ms~~ 122 (392)
T PRK06633 106 GDNEIVIAGGQENMSLG 122 (392)
T ss_pred CCCCEEEEcccccCCCC
Confidence 99999999999999853
No 106
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.96 E-value=2.2e-09 Score=107.41 Aligned_cols=91 Identities=11% Similarity=0.176 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCC-----CcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPT-----PSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVK 151 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~-----p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~ 151 (401)
..+|+.+|+++||+++|++++|||.+|++++ +++.. +..... ..+++. .++++++++ +|++++.+|..|.
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~--~~~~~~-g~~~~~v~~-~Casg~~al~~Aa 101 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPAT--VHPALW-GVPASRHEA-ACASGSVATLAAM 101 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHH--HhhcCC-CCceeeccc-ccHHHHHHHHHHH
Confidence 4699999999999999999999999998864 43222 222222 233554 468999994 9999999999999
Q ss_pred HHHHcCCCCeEEEEeeccccC
Q 044359 152 DLLKVHKNSLALVLSMEAISS 172 (401)
Q Consensus 152 ~~i~~g~~~~vLvv~~e~~s~ 172 (401)
.+|++|.+++|||+++|++|.
T Consensus 102 ~~I~sG~~~~VLvvg~e~~s~ 122 (403)
T PRK06289 102 ADLRAGRYDVALVVGVELMKT 122 (403)
T ss_pred HHHHcCCCCEEEEEEEEecCC
Confidence 999999999999999998763
No 107
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.95 E-value=3.3e-09 Score=105.67 Aligned_cols=93 Identities=13% Similarity=0.210 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCC--CCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCP--TPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~--~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
..+|+.+|+++||+++|++++|||.|+++++ ++.. .+..+..+...+|+. .+++++++ .+|++++.||..|..+|
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I 99 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAI 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHH
Confidence 4699999999999999999999999998864 2211 111223344567886 68999999 59999999999999999
Q ss_pred HcCCCCeEEEEeeccccC
Q 044359 155 KVHKNSLALVLSMEAISS 172 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~ 172 (401)
++|..++|||+++|++|.
T Consensus 100 ~sG~~d~vLvvg~e~~s~ 117 (389)
T PRK07516 100 EAGRARIVLVVGAEKMTA 117 (389)
T ss_pred HCCCCCEEEEEEehhhcc
Confidence 999999999999999764
No 108
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.95 E-value=4.1e-09 Score=104.90 Aligned_cols=94 Identities=12% Similarity=0.229 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
+.+|+.+|++++|+++|++++|||.+|+++. +....+..+..++..+|++..++.+.++ .+|++++.++..|.++|++
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 104 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIML 104 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHhc
Confidence 5699999999999999999999999998764 2222334567789999997568999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..+.||+++.|++|.
T Consensus 105 G~~d~vla~G~e~ms~ 120 (388)
T PRK06366 105 GERDLVIAGGMENMSN 120 (388)
T ss_pred CCCCEEEEEeeEcccc
Confidence 9999999999899874
No 109
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.93 E-value=1.1e-08 Score=95.86 Aligned_cols=189 Identities=16% Similarity=0.213 Sum_probs=109.8
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCC--CceecCCCcc-------CCCCCCC-
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIG--DESCIPLNLH-------EMQPDVS- 70 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~--~R~~~~~~~~-------~~~~~~~- 70 (401)
|++|.|+|+|...|.. .+.+++.+.+..- +........ + ++..+.. ...+...-.. ....+..
T Consensus 1 m~~V~ItG~g~~~p~g---~~~~~~w~~L~~g-~~~~~~~~~-r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (254)
T PF00109_consen 1 MRRVVITGMGCVTPGG---DGLEEFWEALLSG-RSGIRPIPE-R--WDPSDYYDPPSRVAGEIDDKKGGFIDDFDFDAYF 73 (254)
T ss_dssp -S-EEEEEEEEEBTTB---SSHHHHHHHHHTT----EEESCS-S--SCHTTSTTSSCSEEECBSSSEESSSTTTCGGGTS
T ss_pred CCEEEEEEEEEECcCC---CCHHHHHhhhccC-ceeeeeecc-c--cccccccccCCcccccccccccceeeeccccccc
Confidence 5789999999999998 7899999876531 110000000 0 0001110 0111110000 0000011
Q ss_pred --h--H--HHHHHHHHHHHHHHHHHHHhCCCCcCCcC-----EEEEeee-cCC-----------------------CCC-
Q 044359 71 --L--K--RSREETEEVLCTIVKDLLSKHKINPKSID-----ILVTNCS-IFC-----------------------PTP- 114 (401)
Q Consensus 71 --l--~--~~~~~~~~la~~Aa~~aL~~ag~~~~dId-----~li~~s~-~~~-----------------------~~p- 114 (401)
. . ........|+..|+++||+++|+++.+++ .|+++++ .++ ..|
T Consensus 74 ~~~~~~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 153 (254)
T PF00109_consen 74 FGIPPREARRMDRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPN 153 (254)
T ss_dssp TCHHHHHHHTS-HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTT
T ss_pred ccccchhhhhhhhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCccccc
Confidence 1 0 01233568999999999999999985332 2334432 210 022
Q ss_pred cHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeecc-ccCCC----------CCC-----C
Q 044359 115 SISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEA-ISSNG----------YTG-----S 178 (401)
Q Consensus 115 ~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~-~s~~~----------~~~-----~ 178 (401)
..+.+|+..+|+. -+.+.+.+ +|++++.||..|..+|++|..+.|||.++|. .+... ... -
T Consensus 154 ~~a~~ia~~~gl~--G~~~tv~~-acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf 230 (254)
T PF00109_consen 154 SAAGRIAILFGLR--GPSYTVST-ACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPF 230 (254)
T ss_dssp HHHHHHHHHHTB---SSEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGST
T ss_pred ccccchhhhcCCC--Cccccccc-cccccccccchhcccccccccccccccccccccccccccccccccccccccccccc
Confidence 2567899999996 57888994 9999999999999999999999999999993 33210 010 0
Q ss_pred CcchhhhhhcccccceEEEEecC
Q 044359 179 TKSMLISNTVFRMGGAAILLSNR 201 (401)
Q Consensus 179 d~~~~i~~~lfGDGAaA~ll~~~ 201 (401)
++.. ..+++|+||+++||++.
T Consensus 231 ~~~~--~G~v~gEGa~~~vLe~~ 251 (254)
T PF00109_consen 231 DPFA--DGFVLGEGAGALVLERL 251 (254)
T ss_dssp BTTB---SB-BB-EEEEEEEEEH
T ss_pred CCCC--CCEEEECceEEEEEEEh
Confidence 1111 46899999999999874
No 110
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.93 E-value=4.4e-09 Score=104.88 Aligned_cols=95 Identities=13% Similarity=0.251 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHh-CCCCcCCcCEEEEeee-c-CCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSK-HKINPKSIDILVTNCS-I-FCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~-~-~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
+.+|+.+|++++|++ +|+++++||.|++++. + ....++.+..++..+|++.+++++.|+ .+|++++.|+..|.+.|
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~I 104 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARAI 104 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHHH
Confidence 579999999999995 7999999999999874 2 222366778899999998679999999 59999999999999999
Q ss_pred HcCCCCeEEEEeeccccCC
Q 044359 155 KVHKNSLALVLSMEAISSN 173 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~~ 173 (401)
++|..+.+|++++|++|..
T Consensus 105 ~sG~~dvvlagGvEsmS~~ 123 (401)
T PRK09050 105 KAGEAELMIAGGVESMSRA 123 (401)
T ss_pred HCCCCCEEEEecccccccC
Confidence 9999999999999999864
No 111
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.92 E-value=3.6e-09 Score=106.33 Aligned_cols=94 Identities=18% Similarity=0.290 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeec-CCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSI-FCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~-~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|++++|+++++++++||.+|+++.. ....+.++..++-..|++..++++.|+ .+|++++.|+..|.++|++
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~s 109 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIMA 109 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHHC
Confidence 57999999999999999999999999998742 222345666666678998679999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..+.+|++++|++|.
T Consensus 110 G~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 110 GAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCEEEEeeeEcccC
Confidence 9999999999999985
No 112
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.91 E-value=5.7e-09 Score=103.96 Aligned_cols=95 Identities=16% Similarity=0.301 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHh-CCCCcCCcCEEEEeee--cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSK-HKINPKSIDILVTNCS--IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~--~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
+.+|+.+|++++|++ +++++++||.+++++. .....+..+..++..+|++.+++++.|++ +|++++.|+..|...|
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~-~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNR-LCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEeec-hhhhHHHHHHHHHHHH
Confidence 579999999999995 7999999999999864 22223667888999999986799999995 9999999999999999
Q ss_pred HcCCCCeEEEEeeccccCC
Q 044359 155 KVHKNSLALVLSMEAISSN 173 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~~ 173 (401)
++|..+.+|++++|++|..
T Consensus 104 ~sG~~d~~la~G~E~ms~~ 122 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSRA 122 (400)
T ss_pred HCCCCCEEEEeccccccCC
Confidence 9999999999999999864
No 113
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.90 E-value=8.7e-09 Score=103.79 Aligned_cols=95 Identities=19% Similarity=0.295 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCC--cCEEEEeee-cCC--CCCcHHHHHHHHcCCC------CCcceEEeecccchhHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKS--IDILVTNCS-IFC--PTPSISSMIINKFGFR------SNIKSINLSGMGCSAGILS 146 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~d--Id~li~~s~-~~~--~~p~~a~~l~~~LGl~------~~~~~~~i~~~gC~~~~~a 146 (401)
..+|+.+|+++||+++|++++| ||.+++++. ... ..+..+..++..+|++ ..++++.|++ +|++++.|
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~-~caSG~~A 126 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEG-ACASGGLA 126 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEEC-cCHHHHHH
Confidence 5799999999999999999999 999998763 221 2355667777665554 3689999994 99999999
Q ss_pred HHHHHHHHHcCCCCeEEEEeeccccCC
Q 044359 147 ISLVKDLLKVHKNSLALVLSMEAISSN 173 (401)
Q Consensus 147 L~~A~~~i~~g~~~~vLvv~~e~~s~~ 173 (401)
+..|.++|++|..+.||++++|++|..
T Consensus 127 i~~A~~~I~sG~~dvvlv~G~E~ms~~ 153 (438)
T PTZ00455 127 VQSAWEALLAGTSDIALVVGVEVQTTV 153 (438)
T ss_pred HHHHHHHHHCCCCCEEEEEEEeecccC
Confidence 999999999999999999999998763
No 114
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.89 E-value=1e-08 Score=102.37 Aligned_cols=93 Identities=16% Similarity=0.178 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|++++|||.+++++. .++........+++.+|++ ..+++.++ .+|++++.++..|...|++
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHC
Confidence 4699999999999999999999999998764 2221122235688899998 48899999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..+.||++++|++|.
T Consensus 105 G~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 105 GAYDIALALGVEKLKD 120 (398)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 115
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.87 E-value=1.3e-08 Score=101.20 Aligned_cols=95 Identities=6% Similarity=0.212 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeec--CCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSI--FCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~--~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
+.+|+.+|++++|+++++++++||.+|+++.. +...+..+..+.-..|++.+++.+.|+ .+|+|++.|+..|.++|+
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHHHHH
Confidence 57999999999999999999999999998642 221245555555555886689999999 599999999999999999
Q ss_pred cCCCCeEEEEeeccccCC
Q 044359 156 VHKNSLALVLSMEAISSN 173 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~~ 173 (401)
+|..+.+|++++|++|..
T Consensus 105 sG~~dvvLagGvEsmS~~ 122 (390)
T PRK06504 105 SGTMDIVIAAGVESMTRV 122 (390)
T ss_pred CCCCCEEEEeeeeecCCC
Confidence 999999999999999864
No 116
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.84 E-value=1.4e-08 Score=100.98 Aligned_cols=95 Identities=13% Similarity=0.253 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHh-CCCCcCCcCEEEEeeecC-CC-CCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSK-HKINPKSIDILVTNCSIF-CP-TPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~~~-~~-~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
+.+|+.++++++|++ +|+++++||.+++++... .. .+..+..++..+|++..++++.|++ +|++++.|+..|..+|
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~~-~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVNR-LCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeeec-hhHHHHHHHHHHHHHH
Confidence 469999999999996 799999999999987432 22 2456677889999986699999994 9999999999999999
Q ss_pred HcCCCCeEEEEeeccccCC
Q 044359 155 KVHKNSLALVLSMEAISSN 173 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~~ 173 (401)
++|..+.||+++.|.+|..
T Consensus 106 ~sG~~d~vlv~G~E~ms~~ 124 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGHV 124 (387)
T ss_pred HCCCCCEEEEccccccccC
Confidence 9999999999999998863
No 117
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.80 E-value=2.8e-08 Score=100.13 Aligned_cols=93 Identities=14% Similarity=0.092 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecC-CCCCcHH-HHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIF-CPTPSIS-SMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a-~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
..+|+.+|+++||+++|++++|||.+++++..+ ......+ ..++..||++ .++++.++ .+|+++..++..|...|+
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~-~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIE-GGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEe-CCcHHHHHHHHHHHHHHH
Confidence 369999999999999999999999988765322 1112233 3467999998 48999999 499999999999999999
Q ss_pred cCCCCeEEEEeeccccC
Q 044359 156 VHKNSLALVLSMEAISS 172 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~ 172 (401)
+|.++.|||+++|++|.
T Consensus 115 sG~~~~vLv~G~e~~s~ 131 (430)
T PRK06365 115 SGRMDCVAVYGFETMSH 131 (430)
T ss_pred cCCCCEEEEEEeeeccc
Confidence 99999999999997653
No 118
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.76 E-value=4.2e-08 Score=98.64 Aligned_cols=95 Identities=9% Similarity=0.203 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|++++|+++|+++++||.+++++. +....+..+..+.-..|++...+++.|+ .+|++++.++..|..+|++
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~s 109 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIAL 109 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHHC
Confidence 5799999999999999999999999999874 2111244566666666776568999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccCC
Q 044359 157 HKNSLALVLSMEAISSN 173 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~~ 173 (401)
|..+.+|++++|.+|..
T Consensus 110 G~~d~vlvgG~E~ms~~ 126 (427)
T PRK09268 110 GQIDSGIAGGVDTTSDA 126 (427)
T ss_pred CCCCEEEEeeEEccCCC
Confidence 99999999999999864
No 119
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.75 E-value=2.3e-08 Score=99.25 Aligned_cols=95 Identities=12% Similarity=0.194 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHh-CCCCcCCcCEEEEeeecC-CC-CCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSK-HKINPKSIDILVTNCSIF-CP-TPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~~~-~~-~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
+.+|+.+|++++|++ +|+++++||.+++++... .. .+..+..+....|++..++++.|+ .+|++++.|+..|.+.|
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~I 103 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARAI 103 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHHH
Confidence 569999999999996 599999999999987421 11 234666677788998779999999 59999999999999999
Q ss_pred HcCCCCeEEEEeeccccCC
Q 044359 155 KVHKNSLALVLSMEAISSN 173 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~~ 173 (401)
++|..+.+|+++.|.+|..
T Consensus 104 ~sG~~d~vlagG~E~ms~~ 122 (385)
T TIGR02445 104 MTGDADVCLVGGVEHMGHV 122 (385)
T ss_pred HCCCCCEEEEeeehhcccC
Confidence 9999999999999999864
No 120
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.69 E-value=7.7e-07 Score=82.96 Aligned_cols=119 Identities=18% Similarity=0.183 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
.-..|..+|++.+|++++++++|||.++-+---.+.. .+...++.|++ |.+.+.+ +|+++..+|.+|+.++.+
T Consensus 50 AE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i--~s~f~ar~l~i----Pf~Glyg-ACST~~e~l~laa~~vdg 122 (329)
T PF07451_consen 50 AESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQII--SSSFAARDLGI----PFLGLYG-ACSTMMESLALAAMLVDG 122 (329)
T ss_dssp HHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCC--HHHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhH--HHHHHHHhcCC----Cccchhh-HHHHHHHHHHHHHHHHhC
Confidence 3357999999999999999999999988665433333 45788899975 6899996 999999999999999999
Q ss_pred CCCCeEEEEeeccccC---CCC----CCCCcchhhhhhcccccceEEEEecCCCC
Q 044359 157 HKNSLALVLSMEAISS---NGY----TGSTKSMLISNTVFRMGGAAILLSNRQQD 204 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~---~~~----~~~d~~~~i~~~lfGDGAaA~ll~~~~~~ 204 (401)
|-.++||+.++-..+. .|. ++..|. .+...--=||+|+||++....
T Consensus 123 g~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp--~tAqwTVTGaGa~il~~~~~~ 175 (329)
T PF07451_consen 123 GFADYVLAATSSHFATAERQFRFPTEYGGQRP--PTAQWTVTGAGAAILSKEGSG 175 (329)
T ss_dssp TS-SEEEEEEEE-CCHHHHHT---GGGT------TT--EE--EEEEEEEESS--S
T ss_pred CCcceEEEEeccccchhhhhccCchhccCCCC--CcccEEEeceEEEEEecCCCC
Confidence 9999999988655432 121 122121 134445568999999987654
No 121
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.63 E-value=5.3e-06 Score=98.50 Aligned_cols=213 Identities=14% Similarity=0.083 Sum_probs=129.1
Q ss_pred HHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------CC-------CC
Q 044359 116 ISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------GY-------TG 177 (401)
Q Consensus 116 ~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~-------~~ 177 (401)
.+.+|...||+. -+.+.|. .+|+|++.||.+|.+.|++|.++.+|+.+++..... +. ++
T Consensus 185 ~A~RIS~~f~L~--Gps~tVd-tACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLG--GMNCVVD-AACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCC--CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 478899999996 4788888 599999999999999999999999999998763210 10 11
Q ss_pred CCcchhhhhhcccccceEEEEecCCCCc--cccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHH
Q 044359 178 STKSMLISNTVFRMGGAAILLSNRQQDK--HIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARA 255 (401)
Q Consensus 178 ~d~~~~i~~~lfGDGAaA~ll~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 255 (401)
.+. ..+++|+|++++||.+-+... +...|.++ ..+...+|+... .++.+ + +.-..+.
T Consensus 262 ~~a----dG~v~GEGag~vvLkrL~dA~~dGd~IyAvI--~G~g~~~DG~~~-~itaP-------------~-~~gq~~~ 320 (2582)
T TIGR02813 262 IDS----KGMMIGEGIGMMALKRLEDAERDGDRIYAVI--KGVGASSDGKFK-SIYAP-------------R-PEGQAKA 320 (2582)
T ss_pred CCC----CcccccceEEEEEeCcHHHHHhCCCcEEEEE--EEEEEcCCCCCC-CCcCC-------------C-HHHHHHH
Confidence 222 368899999999999855432 11223221 122223333211 11111 0 1111112
Q ss_pred HHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHH-----HHHHHHcCCCc---hhhhhhH
Q 044359 256 LRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAII-----DAVEENLKLSK---EDGEASR 327 (401)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~-----~~~~~~lgi~~---e~~~~s~ 327 (401)
++..++. +|+. ++||+++-.|-.+-..- ..+.+.++-.. ..+.. -
T Consensus 321 i~~Al~~-----------------------Agi~---p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~v-g 373 (2582)
T TIGR02813 321 LKRAYDD-----------------------AGFA---PHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIAL-G 373 (2582)
T ss_pred HHHHHHH-----------------------cCCC---HHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCcee-e
Confidence 2222111 3565 78999999998765443 34556665422 12211 1
Q ss_pred HHHhhhcCcccchHHHHHHHH---HHcCCCCC--------------------------------C--CeEEEEeeccchh
Q 044359 328 MTLYRFGNTSSSSYWYELCYL---EAKGKVKK--------------------------------G--DRVWQIAFGSGFK 370 (401)
Q Consensus 328 ~~~~~~Gn~~sasi~~~L~~~---~~~g~l~~--------------------------------G--d~vll~~~G~G~s 370 (401)
.+=..+||+.+|+=...|-.. ++.|.+.| + .++++-+||.|-+
T Consensus 374 SvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGt 453 (2582)
T TIGR02813 374 SVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGT 453 (2582)
T ss_pred ccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCe
Confidence 344778999988877666542 33332211 1 3466788999888
Q ss_pred hcceeeeee
Q 044359 371 VNSAVWKCV 379 (401)
Q Consensus 371 ~~~~~l~~~ 379 (401)
-..++|+--
T Consensus 454 N~hvvlee~ 462 (2582)
T TIGR02813 454 NFHMVLEEY 462 (2582)
T ss_pred eEEEEEeec
Confidence 888888854
No 122
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=98.55 E-value=7.6e-07 Score=82.69 Aligned_cols=92 Identities=15% Similarity=0.307 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeee--cCCCCCcHHHH-HHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCS--IFCPTPSISSM-IINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~--~~~~~p~~a~~-l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
-+|...+.+..+++.+++|+.|+-|++++. ++. . ...++ -+-.-|++..++...++ -.|++++.|+...+.-|+
T Consensus 62 DeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~-g-a~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~Ir 138 (435)
T KOG1389|consen 62 DELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGS-G-ASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKIR 138 (435)
T ss_pred HHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCc-c-hHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHHh
Confidence 478889999999999999999999999874 322 2 33444 45567999888888888 799999999999999999
Q ss_pred cCCCCeEEEEeeccccCC
Q 044359 156 VHKNSLALVLSMEAISSN 173 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~~ 173 (401)
+|.++-.|-.+.|.++..
T Consensus 139 ~G~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 139 AGFYDIGLAAGVESMTTN 156 (435)
T ss_pred cCceeeecccchhhhccc
Confidence 999999999999999875
No 123
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.53 E-value=2.9e-07 Score=91.53 Aligned_cols=89 Identities=11% Similarity=0.090 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcC
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVH 157 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g 157 (401)
..+|+.+|+++||+++||+++|||.+++.+... +.....+++.||+. ..+...+. .+|+++..++..|...|++|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~---~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG 99 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVDGYFCAGDAP---GLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAG 99 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCC---CccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcC
Confidence 369999999999999999999999987532111 11124589999997 46888888 59999999999999999999
Q ss_pred CCCeEEEEeecccc
Q 044359 158 KNSLALVLSMEAIS 171 (401)
Q Consensus 158 ~~~~vLvv~~e~~s 171 (401)
..+.||||++|+.+
T Consensus 100 ~~d~vLvvg~e~~~ 113 (388)
T PRK08142 100 KCSVALITLAGRPR 113 (388)
T ss_pred CCCEEEEEeeeecc
Confidence 99999999999753
No 124
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.49 E-value=1.2e-05 Score=79.92 Aligned_cols=187 Identities=12% Similarity=0.171 Sum_probs=113.9
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCC-CCh-HHHHHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPD-VSL-KRSREET 78 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~-~~l-~~~~~~~ 78 (401)
++.|.|+|+|..-|-- .+.++..+.+.. ++..-. .+. -++..+...+ +..+ ..+.+.. ... ..+....
T Consensus 2 ~~rvviTG~g~vs~lG---~~~~~~~~~l~~-g~sgi~---~~~-~~~~~~~~~~-~~~~-i~~~~~~~~~~~~~~~d~~ 71 (412)
T COG0304 2 MRRVVITGLGIVSSLG---NGVEEVWAALLA-GKSGIR---PIT-RFDASGLGVK-IAGE-IKDLDDQIAKKERRFMDRF 71 (412)
T ss_pred CceEEEecceeeeccc---CCHHHHHHHHhc-CCCCCC---ccc-cccccCCCCc-cccc-ccccccccchHHhhcccHH
Confidence 3679999999999887 577777776532 110000 000 0111111111 1110 0000000 000 0123345
Q ss_pred HHHHHHHHHHHHHhCCCC-cCCcC--E-EEEeee-cCC--------------------------CCC-cHHHHHHHHcCC
Q 044359 79 EEVLCTIVKDLLSKHKIN-PKSID--I-LVTNCS-IFC--------------------------PTP-SISSMIINKFGF 126 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~-~~dId--~-li~~s~-~~~--------------------------~~p-~~a~~l~~~LGl 126 (401)
..++..|+++||+++|++ ..+++ . +++++. .+. .++ ..+..++..+|+
T Consensus 72 ~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g~ 151 (412)
T COG0304 72 SQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGL 151 (412)
T ss_pred HHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHhCC
Confidence 789999999999999997 33343 2 222221 110 122 246678889999
Q ss_pred CCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeecc-cc--------------CC-------CCC-CCCcchh
Q 044359 127 RSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEA-IS--------------SN-------GYT-GSTKSML 183 (401)
Q Consensus 127 ~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~-~s--------------~~-------~~~-~~d~~~~ 183 (401)
. -+.+.+. .+|+++.+|+..|.++|+.|..+.+++.++|. .+ .. ..| +.+|+
T Consensus 152 ~--G~~~~~~-tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~Rd-- 226 (412)
T COG0304 152 K--GPNYTPV-TACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRD-- 226 (412)
T ss_pred C--CCcCChh-hhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCCC--
Confidence 6 5788888 59999999999999999999999999999976 22 11 001 13443
Q ss_pred hhhhcccccceEEEEecCCCC
Q 044359 184 ISNTVFRMGGAAILLSNRQQD 204 (401)
Q Consensus 184 i~~~lfGDGAaA~ll~~~~~~ 204 (401)
.+++|.||+++||+.-+..
T Consensus 227 --Gfv~gEGag~lVLE~~ehA 245 (412)
T COG0304 227 --GFVIGEGAGALVLEELEHA 245 (412)
T ss_pred --CEEEecceeEEEecChhhH
Confidence 6899999999999987654
No 125
>PRK07855 lipid-transfer protein; Provisional
Probab=98.40 E-value=1.3e-06 Score=87.02 Aligned_cols=85 Identities=14% Similarity=0.155 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcC
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVH 157 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g 157 (401)
..+|+.+|+++||+++||+++|||.+++.+.. ..+. ..+++.||+.+..+...+. .+|+++..+|..|...|++|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~--~~l~~~lGl~~~~~~~~v~-~gg~sg~~~~~~A~~~I~sG 98 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPE--IAVARALGIGELKFFSRIH-YGGGAACATVQQAAMAVATG 98 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cccH--HHHHHHCCCCCCcceeeec-CCcHHHHHHHHHHHHHHHCC
Confidence 46999999999999999999999999864321 1222 4688999997424556888 49999999999999999999
Q ss_pred CCCeEEEEee
Q 044359 158 KNSLALVLSM 167 (401)
Q Consensus 158 ~~~~vLvv~~ 167 (401)
.+++|||++.
T Consensus 99 ~~d~vLv~g~ 108 (386)
T PRK07855 99 VADVVVCYRA 108 (386)
T ss_pred CCCEEEEEee
Confidence 9999999987
No 126
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.26 E-value=5.4e-06 Score=82.25 Aligned_cols=89 Identities=11% Similarity=0.151 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHhCC-CCc-CCcCEEEEeeecCC-CCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHK-INP-KSIDILVTNCSIFC-PTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag-~~~-~dId~li~~s~~~~-~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
..+|+.+|+++||+++| +++ +|||.+++++.... ........+++.||+. ..+.+.+ |+++..++..|...|
T Consensus 25 ~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~~aV 99 (385)
T PRK06066 25 FREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAVMHI 99 (385)
T ss_pred HHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHHHHH
Confidence 36999999999999999 997 79999987542111 0111224577889985 2344443 789999999999999
Q ss_pred HcCCCCeEEEEeecccc
Q 044359 155 KVHKNSLALVLSMEAIS 171 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s 171 (401)
++|.+++|||++.|+++
T Consensus 100 ~sG~~d~vLv~g~~~~~ 116 (385)
T PRK06066 100 NSGLANVVVVEAHSKPS 116 (385)
T ss_pred HcCCCCEEEEEEEeecc
Confidence 99999999999999754
No 127
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=98.16 E-value=8.7e-06 Score=81.12 Aligned_cols=96 Identities=13% Similarity=0.282 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHhC--CCCcCCcCEEEEeee--cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKH--KINPKSIDILVTNCS--IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDL 153 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~a--g~~~~dId~li~~s~--~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~ 153 (401)
+.++.....+..+++. ++++.+||.++.++. .+......+..++..+|++.+++.+.|+ .+|++++.|+..|...
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~ 105 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQA 105 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHH
Confidence 3456555555555433 677778999998863 2334677889999999998669999999 5999999999999999
Q ss_pred HHcCCCCeEEEEeeccccCCC
Q 044359 154 LKVHKNSLALVLSMEAISSNG 174 (401)
Q Consensus 154 i~~g~~~~vLvv~~e~~s~~~ 174 (401)
|++|..+.||+++.|++|...
T Consensus 106 I~sG~~dvvlagG~E~mS~~~ 126 (392)
T COG0183 106 IASGEADVVLAGGVEKMSDAP 126 (392)
T ss_pred HHCCCCCEEEEEeeeeccCCC
Confidence 999999999999999999864
No 128
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=98.12 E-value=4.4e-06 Score=76.06 Aligned_cols=89 Identities=16% Similarity=0.237 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcC
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVH 157 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g 157 (401)
+||+.+|..+||+++++.-++|+.-+++-. .+.. ...+...++|+. .++.+.++| .|+++.+||-+|.++|++|
T Consensus 30 pd~a~ea~tkal~da~ikys~vqqa~vgyvfgdst---cgqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesg 104 (408)
T KOG1406|consen 30 PDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDST---CGQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESG 104 (408)
T ss_pred chHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCc---cchHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcC
Confidence 589999999999999999999987665432 2221 224556699998 699999997 9999999999999999999
Q ss_pred CCCeEEEEeeccccC
Q 044359 158 KNSLALVLSMEAISS 172 (401)
Q Consensus 158 ~~~~vLvv~~e~~s~ 172 (401)
..+.||..+.|++++
T Consensus 105 n~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 105 NSDCVLALGFEKMER 119 (408)
T ss_pred CcceEEeechhhhCC
Confidence 999999999999876
No 129
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=98.08 E-value=8.6e-06 Score=76.12 Aligned_cols=97 Identities=11% Similarity=0.172 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
.+.+|+..|++.+|+++.++++|++-+|++. .+-...-..+.+.+--.||+.++++..++ ..|++++.|+.+|++-|+
T Consensus 29 ~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~ 107 (396)
T KOG1390|consen 29 TATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQ 107 (396)
T ss_pred chhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHh
Confidence 3679999999999999999999999999986 34334445667888888999899999999 799999999999999999
Q ss_pred cCCCCeEEEEeeccccCCC
Q 044359 156 VHKNSLALVLSMEAISSNG 174 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~~~ 174 (401)
.|..+.|+..+.|.||...
T Consensus 108 ~G~~divVaGGmEsMS~vP 126 (396)
T KOG1390|consen 108 TGHADIVVAGGMESMSNVP 126 (396)
T ss_pred cCCccEEEecccchhccCc
Confidence 9999999999999999743
No 130
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.07 E-value=0.00075 Score=75.30 Aligned_cols=292 Identities=13% Similarity=0.132 Sum_probs=163.1
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCc-----e------ecCCCccCCCCCCCh
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDE-----S------CIPLNLHEMQPDVSL 71 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R-----~------~~~~~~~~~~~~~~l 71 (401)
+|-|+|+++.+|+- -+.+++.+.+..- .-...++..-+|=.+..+...+ . ++. +..++ +..+
T Consensus 5 ~IAIiGm~~rfPga---~~~~~~W~~l~~g-~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~-~~~~F--D~~f 77 (1061)
T COG3321 5 PIAIIGMACRFPGA---DSPEEFWDLLKEG-RDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLD-DVDDF--DALF 77 (1061)
T ss_pred cEEEEeccccCCCC---CCHHHHHHHHhcC-CceeeecChhhhhHhhccCCccccccccccccccccC-Ccccc--CHHH
Confidence 48899999999994 6889999887642 1100111111122222222222 1 111 11110 0111
Q ss_pred -----H--HHHHHHHHHHHHHHHHHHHhCCCCcCCcCE----EEEeee-cCCCCC-------------------cHHHHH
Q 044359 72 -----K--RSREETEEVLCTIVKDLLSKHKINPKSIDI----LVTNCS-IFCPTP-------------------SISSMI 120 (401)
Q Consensus 72 -----~--~~~~~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~-~~~~~p-------------------~~a~~l 120 (401)
. +..+.-..|..+.+.+||+++|++++.+.. |+.+.+ .+|... -.+.+|
T Consensus 78 FgisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Ri 157 (1061)
T COG3321 78 FGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRI 157 (1061)
T ss_pred cCCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHH
Confidence 0 011112349999999999999999998884 444432 333221 157889
Q ss_pred HHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCC-----------CCC---CCcchhhhh
Q 044359 121 INKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNG-----------YTG---STKSMLISN 186 (401)
Q Consensus 121 ~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~-----------~~~---~d~~~~i~~ 186 (401)
...||++ -+.+.|. .+|++.+.|+.+|.+.|++|.++.+|+-++...-... .++ +..+.-...
T Consensus 158 sy~l~l~--GPs~~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG 234 (1061)
T COG3321 158 SYVLGLS--GPSVTVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADG 234 (1061)
T ss_pred HHHhcCC--CCCcccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCC
Confidence 9999996 5888888 6999999999999999999999999988876642110 010 000011135
Q ss_pred hcccccceEEEEecCCCCc--cccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhC
Q 044359 187 TVFRMGGAAILLSNRQQDK--HIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLG 264 (401)
Q Consensus 187 ~lfGDGAaA~ll~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~ 264 (401)
++.|.|+++++|.+-.... +...|.++ -.+....||... .+..| .+....+.++..+..
T Consensus 235 ~v~geG~g~vvLKrl~~A~~dgd~IyavI--~gsavn~dG~~~-gltaP--------------~~~aQ~~v~~~al~~-- 295 (1061)
T COG3321 235 YVRGEGAGVVVLKRLSDAERDGDRIYAVI--RGSAVNQDGRSN-GLTAP--------------NLEAQADVIREALAD-- 295 (1061)
T ss_pred EEEeeeEEEEEEEEhHHHHhCCCeEEEEE--EeeeeccCCCcC-CCCCC--------------CHHHHHHHHHHHHHh--
Confidence 7899999999999854321 11233322 123333333221 11111 011111122222111
Q ss_pred CCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHH-----HHHHHcCCCc-hhhhhhHHHHhhhcCccc
Q 044359 265 PHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIID-----AVEENLKLSK-EDGEASRMTLYRFGNTSS 338 (401)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~-----~~~~~lgi~~-e~~~~s~~~~~~~Gn~~s 338 (401)
+++. +++|+++=.|..+..+-+ .+.+.++-.. +..+.--++-.+.||+.+
T Consensus 296 ---------------------a~i~---p~tv~yvEaHgTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~ 351 (1061)
T COG3321 296 ---------------------AGID---PATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEA 351 (1061)
T ss_pred ---------------------cCCC---cccCcEEEecCCCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHH
Confidence 3555 788999999996644333 3444444222 333221245577888888
Q ss_pred chHHHHHHH
Q 044359 339 SSYWYELCY 347 (401)
Q Consensus 339 asi~~~L~~ 347 (401)
|.=...|-.
T Consensus 352 AaGiagliK 360 (1061)
T COG3321 352 AAGIAGLIK 360 (1061)
T ss_pred HHHHHHHHH
Confidence 876666654
No 131
>PRK07937 lipid-transfer protein; Provisional
Probab=98.02 E-value=3e-05 Score=76.14 Aligned_cols=88 Identities=16% Similarity=0.070 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC--cHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP--SISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p--~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
.+|+.+|+++||+++|++++|||.++.++. +.... .....+...+|+.+..+...+. +++..++..|...|++
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~----~~g~~a~~~A~~aI~s 99 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVE----MDAAWALYEAWVKLLT 99 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEec----CcHHHHHHHHHHHHhc
Confidence 489999999999999999999998864432 22111 1123456778875334444444 3577799999999999
Q ss_pred CCCCeEEEEeecccc
Q 044359 157 HKNSLALVLSMEAIS 171 (401)
Q Consensus 157 g~~~~vLvv~~e~~s 171 (401)
|..++|||++.|+++
T Consensus 100 G~~d~VLv~g~~k~~ 114 (352)
T PRK07937 100 GEVDTALVYGFGKSS 114 (352)
T ss_pred CCCCEEEEEEecccC
Confidence 999999999999764
No 132
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.81 E-value=0.00021 Score=68.05 Aligned_cols=121 Identities=14% Similarity=0.179 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcC---CcCE----EEEeee-cC---------------------CCCC----c-HHHHHH
Q 044359 76 EETEEVLCTIVKDLLSKHKINPK---SIDI----LVTNCS-IF---------------------CPTP----S-ISSMII 121 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~---dId~----li~~s~-~~---------------------~~~p----~-~a~~l~ 121 (401)
.....++..|+++||+++++.+. +.|. |.+++. .+ ++.| + .+.+|.
T Consensus 92 s~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vs 171 (440)
T KOG1394|consen 92 SKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVS 171 (440)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhh
Confidence 34578999999999999997654 2222 222221 11 1223 1 357889
Q ss_pred HHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCC----------------CC-------CC
Q 044359 122 NKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNG----------------YT-------GS 178 (401)
Q Consensus 122 ~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~----------------~~-------~~ 178 (401)
.++|+. .+...++ .+|+++.+++-.|.++|+.|..+..|.-++|.+-..+ ++ +.
T Consensus 172 m~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~ 248 (440)
T KOG1394|consen 172 MKYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDK 248 (440)
T ss_pred hhhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCcc
Confidence 999995 5888899 6999999999999999999999998888888753211 11 12
Q ss_pred CcchhhhhhcccccceEEEEecCCC
Q 044359 179 TKSMLISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 179 d~~~~i~~~lfGDGAaA~ll~~~~~ 203 (401)
+|+ .+++|.|++.+||+.-+.
T Consensus 249 ~Rd----GFVmGEGagvlvlEelEH 269 (440)
T KOG1394|consen 249 KRD----GFVMGEGAGVLVLEELEH 269 (440)
T ss_pred CCC----ceeeccceeEEehHhHHH
Confidence 233 689999999999987554
No 133
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.53 E-value=0.00017 Score=65.71 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEee----ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNC----SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKD 152 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s----~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~ 152 (401)
++.+|.+-|++.||+.+++.++.+|++|++. +.+-. -++..+.-+.|.+.+.++..|+ .=|.++.+++-.+.+
T Consensus 27 ~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgI--Yl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ 103 (396)
T KOG1391|consen 27 SATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGI--YLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQ 103 (396)
T ss_pred chhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCce--EeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHH
Confidence 3679999999999999999999999999863 33321 1346677788888889999999 699999999999999
Q ss_pred HHHcCCCCeEEEEeeccccCC
Q 044359 153 LLKVHKNSLALVLSMEAISSN 173 (401)
Q Consensus 153 ~i~~g~~~~vLvv~~e~~s~~ 173 (401)
-|.-|..+.||.-+.|.+|..
T Consensus 104 ~I~vgea~ivL~GGtEnMSq~ 124 (396)
T KOG1391|consen 104 EICVGEAEIVLCGGTENMSQA 124 (396)
T ss_pred HhhcCcceEEEecCccccccC
Confidence 999999999999999999864
No 134
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=97.50 E-value=0.00024 Score=67.11 Aligned_cols=63 Identities=21% Similarity=0.243 Sum_probs=46.6
Q ss_pred hhhhhHHHHhhhcCcccchHHHHHHHHH--HcCCCCCCCeEEEEeeccchhhcceeeeeeccCCc
Q 044359 322 DGEASRMTLYRFGNTSSSSYWYELCYLE--AKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDP 384 (401)
Q Consensus 322 ~~~~s~~~~~~~Gn~~sasi~~~L~~~~--~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~ 384 (401)
|+.+|...-++.|||.++|+++.|..++ .....-.|++|+|+++|+|+..+..-+++.+...+
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~~~~ 207 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPGAEE 207 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TTGGG
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCCccc
Confidence 4444556668999999999999999999 33444479999999999999988888888775443
No 135
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.29 E-value=0.00023 Score=65.79 Aligned_cols=96 Identities=16% Similarity=0.228 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
.+.||+.+|...+|++..++.+.||.||+++. ...-..+++...+-..|++..+++..+. ++|-+.-.|+-....+|+
T Consensus 65 mphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmglia 143 (465)
T KOG1392|consen 65 MPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIA 143 (465)
T ss_pred chhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEe
Confidence 36799999999999999999999999999984 3444556788888888998889999999 799999999999999999
Q ss_pred cCCCCeEEEEeeccccCC
Q 044359 156 VHKNSLALVLSMEAISSN 173 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~~ 173 (401)
+|.++.++.-+.|.+|..
T Consensus 144 tg~~dvivaggvelmsdv 161 (465)
T KOG1392|consen 144 TGNADVIVAGGVELMSDV 161 (465)
T ss_pred eCCcCEEEEcceeecccC
Confidence 999999999999999864
No 136
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=96.22 E-value=0.0064 Score=47.23 Aligned_cols=72 Identities=18% Similarity=0.314 Sum_probs=42.7
Q ss_pred HHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEee---cccchhHHHHHHHHHHHHHcC---CCCeEE
Q 044359 90 LSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLS---GMGCSAGILSISLVKDLLKVH---KNSLAL 163 (401)
Q Consensus 90 L~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~---~~gC~~~~~aL~~A~~~i~~g---~~~~vL 163 (401)
|+++|++++|||.+++... .......+.+.+|++++.....+. +.+|++-..+| ..+++.+ +.+++|
T Consensus 1 L~~~g~~~~did~~i~hq~----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L---~~~~~~g~~~~Gd~vl 73 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINL---ADALEEGRIKPGDRVL 73 (90)
T ss_dssp HHHTT--GGGESEEEE-SS----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHH---HHHHHTTSSCTTEEEE
T ss_pred CccccCCHHHCCEEEeCCC----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHH---HHHHHcCCCCCCCEEE
Confidence 7899999999999997652 223445689999998554333332 24444444444 4444443 578888
Q ss_pred EEeec
Q 044359 164 VLSME 168 (401)
Q Consensus 164 vv~~e 168 (401)
+++.-
T Consensus 74 ~~~~G 78 (90)
T PF08541_consen 74 LVGFG 78 (90)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88754
No 137
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=95.40 E-value=0.31 Score=44.51 Aligned_cols=114 Identities=11% Similarity=-0.012 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecC----------------CCCCc---------HHHHHHHHcCCCCCcce
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIF----------------CPTPS---------ISSMIINKFGFRSNIKS 132 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~----------------~~~p~---------~a~~l~~~LGl~~~~~~ 132 (401)
...|++.++.+++++. +++|.+||+|..+ ...|. .+.++.-..|. ..+.
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~~ 107 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGPN 107 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCce
Confidence 4688999999888653 5678999987432 12231 23444445554 3678
Q ss_pred EEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCC
Q 044359 133 INLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 133 ~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~ 203 (401)
..+. .|-.++..||.-|..++..| .+.||||+.|-.....+... .. ......--|.|++|++++.
T Consensus 108 tal~-a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~-~~---~~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 108 TALA-AGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEF-RP---ERDPPFPYALALVLSPGDS 172 (218)
T ss_pred EEEe-cCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhc-cc---ccCCCcCEEEEEEecCCCC
Confidence 8888 58889999999999999999 89999999998654332211 00 0112334678888887664
No 138
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.92 E-value=0.18 Score=50.16 Aligned_cols=87 Identities=14% Similarity=0.185 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHc-----CCCCCcceE---EeecccchhHHHHH
Q 044359 76 EETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKF-----GFRSNIKSI---NLSGMGCSAGILSI 147 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~L-----Gl~~~~~~~---~i~~~gC~~~~~aL 147 (401)
+...+...++++++|+++|++++|||.++.... .+..-..++++| |++++.... ...|.+|++...+|
T Consensus 268 ~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~----n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L 343 (378)
T PRK06816 268 ENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYS----SEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIML 343 (378)
T ss_pred HHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcc----cHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHH
Confidence 334556688999999999999999999986542 223445677766 887443222 33345666666666
Q ss_pred HHHHHHHHcC---CCCeEEEEeecc
Q 044359 148 SLVKDLLKVH---KNSLALVLSMEA 169 (401)
Q Consensus 148 ~~A~~~i~~g---~~~~vLvv~~e~ 169 (401)
..+ ++.| ++++|++++.+.
T Consensus 344 ~~a---~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 344 DEL---LNSGRLKPGQKILCFVPES 365 (378)
T ss_pred HHH---HHcCCCCCCCEEEEEEecc
Confidence 554 4443 468888888775
No 139
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=94.90 E-value=0.093 Score=51.49 Aligned_cols=83 Identities=18% Similarity=0.186 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceE-----EeecccchhHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSI-----NLSGMGCSAGILSISLVKD 152 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~-----~i~~~gC~~~~~aL~~A~~ 152 (401)
....+.++++++|+++|++++|||.+++... .+.+-..+.++||++++.... .+.|+++++-..+|..+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~----~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQP----NGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCC----ChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 3455668999999999999999999986542 223445689999997433222 4555778887777776654
Q ss_pred HHHcCCCCeEEEEe
Q 044359 153 LLKVHKNSLALVLS 166 (401)
Q Consensus 153 ~i~~g~~~~vLvv~ 166 (401)
.+ .+.++||+++
T Consensus 282 ~~--~~Gd~vll~~ 293 (345)
T TIGR00748 282 IA--EPGDRILAVS 293 (345)
T ss_pred hc--CCCCEEEEEE
Confidence 33 3456777666
No 140
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.53 E-value=0.16 Score=49.38 Aligned_cols=86 Identities=15% Similarity=0.174 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
.+.....++.+++|+++|++++|||.+++... ....-..++++||++++.....+...|-.+...-+-.-..+++.
T Consensus 227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~----~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~ 302 (329)
T PRK07204 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQA----SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEAIKQ 302 (329)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHHHHc
Confidence 44556778999999999999999999986542 11234678999999754433223222322222222222344555
Q ss_pred C---CCCeEEEEe
Q 044359 157 H---KNSLALVLS 166 (401)
Q Consensus 157 g---~~~~vLvv~ 166 (401)
+ +.+++|+++
T Consensus 303 g~~~~Gd~vll~~ 315 (329)
T PRK07204 303 KKVQRGNKILLLG 315 (329)
T ss_pred CCCCCCCEEEEEE
Confidence 4 457777776
No 141
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=94.31 E-value=0.16 Score=49.27 Aligned_cols=81 Identities=11% Similarity=0.176 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeec---ccchhHHHHHHHHHHHHHc
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSG---MGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~---~gC~~~~~aL~~A~~~i~~ 156 (401)
....++++++|+++|++++|||++++... .+.....++++||++++.....+.. ++|++...+|. .+++.
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~----~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~---~~~~~ 298 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQA----NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALD---EAIQN 298 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHH---HHHHh
Confidence 45667889999999999999999987642 2334566899999985433333322 34444444443 33444
Q ss_pred C---CCCeEEEEee
Q 044359 157 H---KNSLALVLSM 167 (401)
Q Consensus 157 g---~~~~vLvv~~ 167 (401)
+ +.+++|+++.
T Consensus 299 g~~~~Gd~vll~~~ 312 (326)
T CHL00203 299 NKIQPGQIIVLSGF 312 (326)
T ss_pred CCCCCCCEEEEEEE
Confidence 4 4577777763
No 142
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=94.09 E-value=0.13 Score=49.89 Aligned_cols=84 Identities=14% Similarity=0.181 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEe---ecccchhHHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINL---SGMGCSAGILSISLVKDL 153 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i---~~~gC~~~~~aL~~A~~~ 153 (401)
...+...++.+++|+++|++++|||.+++.. ..+..-..+.++||++++.....+ .|+++++-..+|. .+
T Consensus 224 ~~~~~~~~~~~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~---~~ 296 (326)
T PRK05963 224 EAVRMMSGASQNVLASAAMTPQDIDRFFPHQ----ANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLS---LA 296 (326)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHH---HH
Confidence 3556667889999999999999999988743 233455678999999754333222 2234444444443 33
Q ss_pred HHcC---CCCeEEEEee
Q 044359 154 LKVH---KNSLALVLSM 167 (401)
Q Consensus 154 i~~g---~~~~vLvv~~ 167 (401)
++.+ +++++|+++.
T Consensus 297 ~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 297 NLEQPLREGERLLFAAA 313 (326)
T ss_pred HHhCCCCCCCEEEEEEE
Confidence 4443 4578888774
No 143
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.08 E-value=0.24 Score=48.19 Aligned_cols=87 Identities=11% Similarity=0.177 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEE---eecccchhHHHHHHHHHH
Q 044359 76 EETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSIN---LSGMGCSAGILSISLVKD 152 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~---i~~~gC~~~~~aL~~A~~ 152 (401)
+.......++.+++|+++|++++|||.+++... .+..-..+.++||++++..... ..|+++++...+|..+
T Consensus 235 ~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~----~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~-- 308 (338)
T PRK09258 235 KEGVELAVDTWEAFLAQLGWAVEQVDRVICHQV----GAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA-- 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCC----CHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH--
Confidence 344566778899999999999999999886542 2334567899999975433323 2334444444555443
Q ss_pred HHHcC---CCCeEEEEeecc
Q 044359 153 LLKVH---KNSLALVLSMEA 169 (401)
Q Consensus 153 ~i~~g---~~~~vLvv~~e~ 169 (401)
++.+ +.+++|+++...
T Consensus 309 -~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 309 -AEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred -HHhCCCCCCCEEEEEEech
Confidence 3443 467888887543
No 144
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.02 E-value=0.22 Score=48.14 Aligned_cols=82 Identities=12% Similarity=0.169 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEe---ecccchhHHHHHHHHHHHHH
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINL---SGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i---~~~gC~~~~~aL~~A~~~i~ 155 (401)
.+...++.+++|+++|++++|||.+++.. ..+.....+.++||++++.....+ .|++|++...+|. .+++
T Consensus 224 ~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~---~~~~ 296 (325)
T PRK12879 224 VRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALD---LALE 296 (325)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHH---HHHH
Confidence 44556788999999999999999998764 233445678999999743332222 2234444444443 4455
Q ss_pred cC---CCCeEEEEee
Q 044359 156 VH---KNSLALVLSM 167 (401)
Q Consensus 156 ~g---~~~~vLvv~~ 167 (401)
.+ +.+++|+++.
T Consensus 297 ~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 297 QGKIKPGDTLLLYGF 311 (325)
T ss_pred cCCCCCCCEEEEEEE
Confidence 54 3567777763
No 145
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=93.68 E-value=0.25 Score=49.63 Aligned_cols=91 Identities=19% Similarity=0.277 Sum_probs=58.9
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeec--------ccchhHHHHHHHHHHHH
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSG--------MGCSAGILSISLVKDLL 154 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~gC~~~~~aL~~A~~~i 154 (401)
..|++++|+++|++++|||.+...- ..........++||++. ..+.+++ .|++|....+.+..++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 4799999999999999999987432 12233446778888863 3445553 25556666666677776
Q ss_pred HcCCCCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEec
Q 044359 155 KVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSN 200 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~ 200 (401)
+.+ .++.|+. .+..|-.+.|+||++
T Consensus 392 ~~g-~~~Gl~~--------------------~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGLVT--------------------MCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEEEE--------------------EEeeccceeEEEEEe
Confidence 655 4444332 244566677777765
No 146
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=93.63 E-value=0.34 Score=48.16 Aligned_cols=84 Identities=14% Similarity=0.205 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEe---ecccchhHHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINL---SGMGCSAGILSISLVKDL 153 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i---~~~gC~~~~~aL~~A~~~ 153 (401)
.+.....++++++|+++|++++|||+++.... .+.+-..++++||++++.....+ .|+++++...+|..+
T Consensus 277 ~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~--- 349 (379)
T PLN02326 277 FAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA--- 349 (379)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH---
Confidence 34455667889999999999999999886542 22344568999999854333333 334444555555433
Q ss_pred HHcC---CCCeEEEEee
Q 044359 154 LKVH---KNSLALVLSM 167 (401)
Q Consensus 154 i~~g---~~~~vLvv~~ 167 (401)
++.+ +.+++|+++.
T Consensus 350 ~~~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 350 VRSGKVKKGDVIATAGF 366 (379)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4443 4577777763
No 147
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=93.37 E-value=0.4 Score=48.04 Aligned_cols=87 Identities=15% Similarity=0.099 Sum_probs=54.4
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEE-EEe
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVW-QIA 364 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vl-l~~ 364 (401)
+|+. ++|||++=+|-.-....-...+.||+.++++..+ --.--+||...|+=...+.++..+=+=+.|++-+ .+.
T Consensus 308 agl~---~~Did~~ei~d~fa~~~l~~~e~lg~~~~~vN~~-GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g~~~v~~~c 383 (397)
T PRK06954 308 NGWR---AAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVN-GGACALGHPIGASGARILVTLIGALRARGGKRGVASLC 383 (397)
T ss_pred cCCC---HHHCCEEehhhHHHHHHHHHHHHhCCCcccCCcC-CChHHhcccHHHHHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 3565 7999999888875544445668899988877532 3456689998888655555554421113455544 445
Q ss_pred eccchhhcceeee
Q 044359 365 FGSGFKVNSAVWK 377 (401)
Q Consensus 365 ~G~G~s~~~~~l~ 377 (401)
.|.|... +++++
T Consensus 384 ~~gg~g~-a~~~e 395 (397)
T PRK06954 384 IGGGEAT-AMGIE 395 (397)
T ss_pred cccchhh-EEEEE
Confidence 5555544 44554
No 148
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=93.31 E-value=0.48 Score=47.49 Aligned_cols=87 Identities=7% Similarity=0.071 Sum_probs=53.5
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEE-Ee
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQ-IA 364 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll-~~ 364 (401)
+|+. ++|||+|=+|-.-....-.+.+.||++++++..+ --.--+||...|+=...+.++..+=+-+.|.+.+. +.
T Consensus 313 AGl~---~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~-GG~la~GHP~GAsG~~~~~~l~~~L~~~~~~~g~~~~c 388 (402)
T PRK08242 313 AGLT---VDDIDLFELNEAFASVVLRFMQALDIPHDKVNVN-GGAIAMGHPLGATGAMILGTVLDELERRGKRTALITLC 388 (402)
T ss_pred cCCC---HHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcC-CCHHhcCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 3666 8999999999887666667889999988877531 23455788877776655555443211123334332 33
Q ss_pred eccchhhcceeee
Q 044359 365 FGSGFKVNSAVWK 377 (401)
Q Consensus 365 ~G~G~s~~~~~l~ 377 (401)
.|.|.. .+++++
T Consensus 389 ~ggG~g-~a~~~e 400 (402)
T PRK08242 389 VGGGMG-IATIIE 400 (402)
T ss_pred ccCCce-eEEEEE
Confidence 444443 345555
No 149
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=93.21 E-value=0.41 Score=47.91 Aligned_cols=88 Identities=16% Similarity=0.055 Sum_probs=55.9
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEE-Ee
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQ-IA 364 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll-~~ 364 (401)
+|+. ++|||++=+|-.-...--...+.||+.++++..+ --.--+||...|+=...+.++..+=+-+.|++.+. +.
T Consensus 304 agl~---~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~-GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c 379 (393)
T PRK08235 304 TGKT---VEDIDLFEINEAFAAVALASTEIAGIDPEKVNVN-GGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAIC 379 (393)
T ss_pred hCCC---HHHCCeehhcchhHHHHHHHHHHhCCCcccCCcC-CchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 3565 7999999888776555557788999988777432 23455899988877666666554322235566554 33
Q ss_pred eccchhhcceeeee
Q 044359 365 FGSGFKVNSAVWKC 378 (401)
Q Consensus 365 ~G~G~s~~~~~l~~ 378 (401)
.|.|. -.+++|+.
T Consensus 380 ~~gG~-g~a~~~e~ 392 (393)
T PRK08235 380 SGGGQ-GDAVLIEV 392 (393)
T ss_pred ccccc-eEEEEEEe
Confidence 44443 44556653
No 150
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=93.20 E-value=0.31 Score=46.94 Aligned_cols=84 Identities=18% Similarity=0.317 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEee---cccchhHHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLS---GMGCSAGILSISLVKDL 153 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~---~~gC~~~~~aL~~A~~~ 153 (401)
...+...++.+++|+++|++++|||.+++... .+..-..+.++||++++.....+. ++++++...+|. .+
T Consensus 220 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~---~~ 292 (320)
T cd00830 220 FAVRLMPESIEEALEKAGLTPDDIDWFVPHQA----NLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALD---EA 292 (320)
T ss_pred HHHHhhHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHH---HH
Confidence 34566778999999999999999999886542 333446689999997443322222 233333333343 33
Q ss_pred HHcC---CCCeEEEEee
Q 044359 154 LKVH---KNSLALVLSM 167 (401)
Q Consensus 154 i~~g---~~~~vLvv~~ 167 (401)
++.+ +.+++|+++.
T Consensus 293 ~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4444 4688888774
No 151
>PRK06840 hypothetical protein; Validated
Probab=93.14 E-value=0.34 Score=47.24 Aligned_cols=81 Identities=20% Similarity=0.290 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcce-E-EeecccchhHHHHHHHHHHHHHcC
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKS-I-NLSGMGCSAGILSISLVKDLLKVH 157 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~-~-~i~~~gC~~~~~aL~~A~~~i~~g 157 (401)
....++.+++|+++|++++|||.++.... .+..-..++++||++++... . ++.|+++++...+|. .+++++
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~---~~~~~~ 309 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILHM----KRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLH---LALEQG 309 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCc----CHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHH---HHHHcC
Confidence 34568999999999999999999875432 23344568999999743221 1 222234444444443 444544
Q ss_pred ---CCCeEEEEee
Q 044359 158 ---KNSLALVLSM 167 (401)
Q Consensus 158 ---~~~~vLvv~~ 167 (401)
+.+++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 4577777763
No 152
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=93.10 E-value=0.28 Score=49.02 Aligned_cols=88 Identities=9% Similarity=0.035 Sum_probs=50.9
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEE-Ee
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQ-IA 364 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll-~~ 364 (401)
+++. ++|||++=+|-.-.-..-...+.||+.++++..+ --.--+||..+++=...+.+++.+=+-+.|...+. +.
T Consensus 303 agl~---~~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~~-GG~~a~GHp~gatG~r~~~~l~~~l~~~~~~~g~~~~c 378 (392)
T PRK07108 303 AGLK---VDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVN-GGAIAVGHPYGVSGARLTGHALIEGKRRGAKYVVVTMC 378 (392)
T ss_pred cCCC---HHHcCchHhhhHHHHHHHHHHHhcCCCccccCCC-CChHHhCcchhhhHHHHHHHHHHHHHhhCCCEEEEEEc
Confidence 3565 7999999888765443335578899988877532 33556899887776555555443211123334333 33
Q ss_pred eccchhhcceeeee
Q 044359 365 FGSGFKVNSAVWKC 378 (401)
Q Consensus 365 ~G~G~s~~~~~l~~ 378 (401)
.|.|.. .+++++.
T Consensus 379 ~~gg~g-~a~~ie~ 391 (392)
T PRK07108 379 IGGGQG-AAGLFEV 391 (392)
T ss_pred cccChh-hEEEEEe
Confidence 344443 3455553
No 153
>PRK04262 hypothetical protein; Provisional
Probab=93.00 E-value=0.23 Score=48.79 Aligned_cols=81 Identities=19% Similarity=0.272 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcce-----EEeecccchhHHHHHHHHHHHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKS-----INLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~-----~~i~~~gC~~~~~aL~~A~~~i 154 (401)
....++.+++|+++|++++|||.+++.. ..+.+-..++++||++++... -.+.|+++++-..+|..+..
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~-- 282 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQ----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLD-- 282 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCC----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHH--
Confidence 4567889999999999999999988653 223345678899999744322 13344566666666655543
Q ss_pred HcCCCCeEEEEe
Q 044359 155 KVHKNSLALVLS 166 (401)
Q Consensus 155 ~~g~~~~vLvv~ 166 (401)
+..+.+++|+++
T Consensus 283 ~~~~Gd~vll~~ 294 (347)
T PRK04262 283 VAKPGDRILVVS 294 (347)
T ss_pred hCCCCCEEEEEe
Confidence 223456666655
No 154
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=92.90 E-value=0.51 Score=45.49 Aligned_cols=83 Identities=14% Similarity=0.262 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEe---ecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINL---SGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i---~~~gC~~~~~aL~~A~~~i 154 (401)
..+...++.+++|+++|++++|||.+++.. ..+..-..+++.||++++.....+ .+++|++-..+|.. ++
T Consensus 217 ~~~~~~~~~~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~---~~ 289 (318)
T TIGR00747 217 AVRKMGDVVEETLEANGLDPEDIDWFVPHQ----ANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDE---LL 289 (318)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHH---HH
Confidence 344566789999999999999999998644 233355678999999843222222 22444444444433 33
Q ss_pred HcC---CCCeEEEEee
Q 044359 155 KVH---KNSLALVLSM 167 (401)
Q Consensus 155 ~~g---~~~~vLvv~~ 167 (401)
+++ +.+++|+++.
T Consensus 290 ~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 290 RTGRIKPGDLLLLVAF 305 (318)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 443 3577777763
No 155
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=92.77 E-value=0.33 Score=48.76 Aligned_cols=88 Identities=9% Similarity=-0.085 Sum_probs=54.7
Q ss_pred CCCcchhhhcceEeecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeec
Q 044359 287 TYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFG 366 (401)
Q Consensus 287 ~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G 366 (401)
++. ++|||++=+|-.-....-...+.||+.++++..+ --.--+||...++-...+.++..+=+-+.|...|....+
T Consensus 317 gi~---~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~-GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~~~~ 392 (406)
T PRK07851 317 GMS---IDDIDLVEINEAFAAQVLPSARELGIDEDKLNVS-GGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCV 392 (406)
T ss_pred CCC---HHHCCeehhhhHHHHHHHHHHHHhCCCccccCCC-CChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcc
Confidence 565 7999999777665444445568899977666432 335568999888877777776553222445555544444
Q ss_pred cchhhcceeeee
Q 044359 367 SGFKVNSAVWKC 378 (401)
Q Consensus 367 ~G~s~~~~~l~~ 378 (401)
+|-.-.+++++.
T Consensus 393 ~gg~g~a~~~e~ 404 (406)
T PRK07851 393 GGGQGMAMVLER 404 (406)
T ss_pred ccChhhEEEEEe
Confidence 443344556654
No 156
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=92.46 E-value=0.74 Score=46.13 Aligned_cols=87 Identities=9% Similarity=0.022 Sum_probs=50.8
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEE-Ee
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQ-IA 364 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll-~~ 364 (401)
+|+. ++|||++=+|-.-....-...+.||+.+.++..+-. .-.+||...++=...+.++..+=+-+.+.+.+. +.
T Consensus 310 Agi~---~~did~~ei~D~f~~~~l~~~e~lg~~~~~vN~~GG-~la~GHp~gasG~~~~~~~~~~L~~~~~~~g~~~~c 385 (399)
T PRK09052 310 AGLK---QDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGG-AIALGHPLGATGAIRTATVVHGLRRTNLKYGMVTMC 385 (399)
T ss_pred cCCC---HHHcCEEEeCcHHHHHHHHHHHHhCCCCcccCCCCc-hhhcCchHHHHHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 3565 799999998886544444567889998777643211 235899988886666655544211123334443 23
Q ss_pred eccchhhcceeee
Q 044359 365 FGSGFKVNSAVWK 377 (401)
Q Consensus 365 ~G~G~s~~~~~l~ 377 (401)
.|.|. -++++++
T Consensus 386 ~~gg~-g~a~~~e 397 (399)
T PRK09052 386 VGTGM-GAAGIFE 397 (399)
T ss_pred ccCCc-eeEEEEE
Confidence 33333 3445555
No 157
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.46 E-value=0.5 Score=45.51 Aligned_cols=82 Identities=16% Similarity=0.278 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEe---ecccchhHHHHHHHHHHHHH
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINL---SGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i---~~~gC~~~~~aL~~A~~~i~ 155 (401)
.....++.+++|+++|++++|||.++... ..+..-..+.+.||+++......+ .+++|++.+..| ..+++
T Consensus 218 ~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L---~~~~~ 290 (319)
T PRK09352 218 VRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLAL---DEAVR 290 (319)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHH---HHHHH
Confidence 34456789999999999999999998654 233445678999999753322222 223333333333 34444
Q ss_pred cC---CCCeEEEEee
Q 044359 156 VH---KNSLALVLSM 167 (401)
Q Consensus 156 ~g---~~~~vLvv~~ 167 (401)
.+ +.+++|+++.
T Consensus 291 ~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 291 DGRIKRGDLVLLEGF 305 (319)
T ss_pred cCCCCCCCEEEEEEE
Confidence 44 3577777764
No 158
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=92.27 E-value=0.27 Score=47.62 Aligned_cols=89 Identities=16% Similarity=0.236 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHH
Q 044359 74 SREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDL 153 (401)
Q Consensus 74 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~ 153 (401)
....+..+..++.+++|++++++++|||.++..- ....+-..++++||++++.....+.-.|=.+..+---.-...
T Consensus 217 vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~~ 292 (323)
T COG0332 217 VFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDEA 292 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHHHhhHHHHhcccccchHHHHHHHH
Confidence 4556788888999999999999999999998543 233455679999999765555555432222222222222333
Q ss_pred HHcCC---CCeEEEEe
Q 044359 154 LKVHK---NSLALVLS 166 (401)
Q Consensus 154 i~~g~---~~~vLvv~ 166 (401)
++.|. .+.+|+++
T Consensus 293 ~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 293 LREGRIKPGDLVLLEA 308 (323)
T ss_pred hhhCCCCCCCEEEEEe
Confidence 44443 45666555
No 159
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=91.80 E-value=0.78 Score=45.97 Aligned_cols=85 Identities=12% Similarity=-0.051 Sum_probs=50.8
Q ss_pred CCCcchhhhcceEeecCCChHHHHHHHHHcCCCc--hhhhhhHHHHh--hhcCcccchHHHHHHHHHHcCCCCCCCeEEE
Q 044359 287 TYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSK--EDGEASRMTLY--RFGNTSSSSYWYELCYLEAKGKVKKGDRVWQ 362 (401)
Q Consensus 287 ~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~--e~~~~s~~~~~--~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll 362 (401)
|+. ++|||++-+|-.-....-...+.||+.. .++. .+-. -+||...|+=...+.++.++=+-+.|.+.+.
T Consensus 310 Gl~---~~DID~iei~dafa~~~l~~~e~lg~~~~~~pvN---~~GG~la~GHp~gasG~~~v~e~~~qL~~~~~~~g~~ 383 (400)
T PRK13359 310 GMT---LDQFDVIELNEAFASQGLAVLRELGLADDDARVN---PNGGAIALGHPLGASGARLVTTALYQLERTGGRFALC 383 (400)
T ss_pred CCC---HHHcCcCccCcHhHHHHHHHHHHcCCCCCCCCEE---CCCchhhcCCchhHHHHHHHHHHHHHHhhcCCCeEEE
Confidence 565 7999999988876555556778999843 4542 1222 3799987777666666554322234555443
Q ss_pred -Eeeccchhhcceeeee
Q 044359 363 -IAFGSGFKVNSAVWKC 378 (401)
Q Consensus 363 -~~~G~G~s~~~~~l~~ 378 (401)
+..|.|.. .+++++.
T Consensus 384 ~~c~~gG~g-~a~~ie~ 399 (400)
T PRK13359 384 TMCIGVGQG-IAIAIER 399 (400)
T ss_pred EEcccCCce-eEEEEEe
Confidence 33333433 4456553
No 160
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=91.59 E-value=1.1 Score=44.75 Aligned_cols=85 Identities=9% Similarity=-0.051 Sum_probs=54.3
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchH---HHHHHHHHHcCCCCCCCeEEE
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSY---WYELCYLEAKGKVKKGDRVWQ 362 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi---~~~L~~~~~~g~l~~Gd~vll 362 (401)
+|+. ++|||.+=+|-.-....-...+.||+.++++..+ -=.--+||...|+= ...|.+.++. +.|...+.
T Consensus 301 agl~---~~Did~~Ei~d~Fa~~~l~~~e~lG~~~~pvN~~-GG~la~Ghp~gatG~r~~~~l~~~lr~---~~~~~gl~ 373 (390)
T PRK06504 301 AGMK---IDDIDLYEVNEAFASVPLAWLKATGADPERLNVN-GGAIALGHPLGASGTKLMTTLVHALKQ---RGKRYGLQ 373 (390)
T ss_pred cCCC---HHHCCEEEecccchHHHHHHHHHhCCCCCCcCCC-CcHHhcCCCcchhHHHHHHHHHHHHHh---hCCCeEEE
Confidence 3665 7999999999987777778889999998877432 22455799987766 5555555543 23444443
Q ss_pred Eeeccchhhcceeee
Q 044359 363 IAFGSGFKVNSAVWK 377 (401)
Q Consensus 363 ~~~G~G~s~~~~~l~ 377 (401)
...|.|-...+++++
T Consensus 374 ~~~~ggg~g~a~ile 388 (390)
T PRK06504 374 TMCEGGGMANVTIVE 388 (390)
T ss_pred EEeecccceeEEEEE
Confidence 333333333344444
No 161
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=91.23 E-value=0.78 Score=45.98 Aligned_cols=87 Identities=13% Similarity=0.021 Sum_probs=50.2
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcCCCc--hhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEE-
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSK--EDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQ- 362 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~--e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll- 362 (401)
+|+. ++|||++-+|-.-....-.+.+.||+.+ +++..+ -=.--+||...++=...+.++.++=+=+.|...+.
T Consensus 309 Agl~---~~DID~~ei~D~f~~~~l~~~e~lG~~~~~~pvN~~-GG~la~GHp~gasG~~~~~e~~~qLr~~~~~~g~~~ 384 (400)
T TIGR02430 309 AGLS---IDQFDVIELNEAFAAQALAVLRELGLADDDARVNPN-GGAIALGHPLGASGARLVLTALRQLERSGGRYALCT 384 (400)
T ss_pred hCCC---HHHCCCcccCcHHHHHHHHHHHHcCCCCCCCeECCC-CchHhccChHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 3565 7999999988876555567788999854 344210 01224899888765555555444211134554443
Q ss_pred Eeeccchhhcceeee
Q 044359 363 IAFGSGFKVNSAVWK 377 (401)
Q Consensus 363 ~~~G~G~s~~~~~l~ 377 (401)
+..|.|... +++++
T Consensus 385 ~c~~gG~g~-a~~~e 398 (400)
T TIGR02430 385 MCIGVGQGI-ALAIE 398 (400)
T ss_pred EccccChhh-EEEEE
Confidence 344445443 45555
No 162
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=91.02 E-value=1.5 Score=43.98 Aligned_cols=88 Identities=13% Similarity=0.052 Sum_probs=52.4
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcCCCc---hhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEE
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSK---EDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQ 362 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~---e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll 362 (401)
+++. ++|||.+-+|-.-....-...+.||+.+ +++..+ --.--+||..+|+=...+.++.++=+-+.+.+.+.
T Consensus 311 Agl~---~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~ 386 (404)
T PRK06205 311 AGLT---LDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVN-GSGISLGHPVGATGGRILATLLRELQRRQARYGLE 386 (404)
T ss_pred cCCC---HHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCC-CCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeEEE
Confidence 3665 7999999999886655556778899876 345321 23455899987776666665554211123344443
Q ss_pred -Eeeccchhhcceeeee
Q 044359 363 -IAFGSGFKVNSAVWKC 378 (401)
Q Consensus 363 -~~~G~G~s~~~~~l~~ 378 (401)
+..|.|.. .+++++.
T Consensus 387 ~~c~~gg~g-~a~~~e~ 402 (404)
T PRK06205 387 TMCIGGGQG-LAAVFER 402 (404)
T ss_pred EEeccCChh-hEEEEEe
Confidence 33344443 4556654
No 163
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=90.71 E-value=1.6 Score=42.93 Aligned_cols=82 Identities=15% Similarity=0.224 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC-----CCcceE-EeecccchhHHHHHHHHHH
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR-----SNIKSI-NLSGMGCSAGILSISLVKD 152 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~-----~~~~~~-~i~~~gC~~~~~aL~~A~~ 152 (401)
......|++..+++.|+.++|.|.+++.. +.|-+...+++.||.+ +..... .|.|..|++...+| |.-
T Consensus 208 ~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L--as~ 281 (377)
T COG3425 208 FKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL--ASL 281 (377)
T ss_pred HHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--HHH
Confidence 46778999999999999999999999876 4556667788888876 322233 46667787777555 444
Q ss_pred HHHcC-CCCeEEEEe
Q 044359 153 LLKVH-KNSLALVLS 166 (401)
Q Consensus 153 ~i~~g-~~~~vLvv~ 166 (401)
+-.+. +++++|+++
T Consensus 282 L~~a~~~G~rIl~~S 296 (377)
T COG3425 282 LDNAKLPGDRILLFS 296 (377)
T ss_pred HhhcCCCCCEEEEEe
Confidence 44444 567777765
No 164
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=90.68 E-value=1.2 Score=44.54 Aligned_cols=88 Identities=14% Similarity=0.049 Sum_probs=47.1
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEE-EEe
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVW-QIA 364 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vl-l~~ 364 (401)
+|+. ++|||++=+|-.-....-...+.|+++.+++..| -..--+||...|+=..-+.++..+=+-+.|.+.+ .+.
T Consensus 303 AGl~---p~DID~~ei~dafa~~~l~~~~~l~~~~~~vN~s-Gg~~a~GHplgAtG~~~~~~~~~qL~~~~~~~g~~~~c 378 (392)
T PRK06633 303 AGWS---VNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNIN-GGAIAIGHPIGASGGRVLITLIHGLRRAKAKKGLVTLC 378 (392)
T ss_pred cCCC---HHHcCeeehhhHHHHHHHHHHhhhCCCccccCCC-CchHhhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 3565 7999999988543221112357788876666432 3456689998877443333332210102333433 233
Q ss_pred eccchhhcceeeee
Q 044359 365 FGSGFKVNSAVWKC 378 (401)
Q Consensus 365 ~G~G~s~~~~~l~~ 378 (401)
.|.|.. .+++++.
T Consensus 379 ~~gG~g-~a~~~e~ 391 (392)
T PRK06633 379 IGGGMG-MAMCVEA 391 (392)
T ss_pred cccChh-heEEEEe
Confidence 444443 3456654
No 165
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.59 E-value=0.62 Score=46.13 Aligned_cols=86 Identities=13% Similarity=0.202 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHH-cCCCCCc-c----eEEeecccchhHHHHHHH
Q 044359 76 EETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINK-FGFRSNI-K----SINLSGMGCSAGILSISL 149 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~-LGl~~~~-~----~~~i~~~gC~~~~~aL~~ 149 (401)
..+.+...++.+++|+++|++++|||.+++.... ..+-..+.++ ||+.... . .-...|++|++...+|..
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 3456667799999999999999999999865321 1122234555 6653211 1 123344677777777776
Q ss_pred HHHHHHcCCCCeEEEEee
Q 044359 150 VKDLLKVHKNSLALVLSM 167 (401)
Q Consensus 150 A~~~i~~g~~~~vLvv~~ 167 (401)
+...+ .+.+++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 64333 34577777764
No 166
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=90.37 E-value=1.2 Score=42.89 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCC---CCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFR---SNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~---~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
+...++++++|+++|++++|||.++.... ................+.. .....-.+.+.++++++..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 44558999999999999999999987643 2221111222233333321 0111224444677777777777777666
Q ss_pred cC
Q 044359 156 VH 157 (401)
Q Consensus 156 ~g 157 (401)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 55
No 167
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=90.18 E-value=0.89 Score=37.56 Aligned_cols=83 Identities=17% Similarity=0.104 Sum_probs=50.3
Q ss_pred hhhcceEeecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEE-Eeeccchhh
Q 044359 293 KKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQ-IAFGSGFKV 371 (401)
Q Consensus 293 ~~did~~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll-~~~G~G~s~ 371 (401)
.+|||.|=+|-.-....-...+.||++++++..+= =.--+||-..||=...+.++..+-+-+.|++.+. +..|.|..
T Consensus 39 ~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~G-G~la~GHP~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~g- 116 (123)
T PF02803_consen 39 PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNG-GALALGHPLGASGARLVVELAHQLRRRGGRYGLAAICAGGGQG- 116 (123)
T ss_dssp GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT---HHHH-BHTTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTEE-
T ss_pred ccccchhhccchhhhHHHHhhccccccccccCccc-ccccccccccccccchhhhhHHHHHHhchhhhhHHhcccceee-
Confidence 79999999999987777788999999999986421 1234788876665555544443211134666554 33444443
Q ss_pred cceeee
Q 044359 372 NSAVWK 377 (401)
Q Consensus 372 ~~~~l~ 377 (401)
.++++|
T Consensus 117 ~a~lle 122 (123)
T PF02803_consen 117 SAVLLE 122 (123)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 455554
No 168
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=90.06 E-value=2.1 Score=43.26 Aligned_cols=89 Identities=9% Similarity=-0.077 Sum_probs=53.6
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcC-----------------CCchhhhhhHHHHhhhcCcccchHHHHHHHH
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLK-----------------LSKEDGEASRMTLYRFGNTSSSSYWYELCYL 348 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lg-----------------i~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~ 348 (401)
+++. ++|||.+=+|-.-....-...+.|+ ++.+++..+ -=.--+||...++=...+.++
T Consensus 322 AGl~---~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~-GG~la~GhP~gasG~~~~~e~ 397 (428)
T PRK08963 322 AGLT---LADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVL-GGSIAYGHPFAATGARMITQT 397 (428)
T ss_pred cCCC---HHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCC-CCHHhcCCCccccHHHHHHHH
Confidence 3665 7999999999985544334445552 444444321 113457998877777777666
Q ss_pred HHcCCCCCCCeEEEEeeccchhhcceeeee
Q 044359 349 EAKGKVKKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 349 ~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
.++=+-+.|++.|....++|-...+++|+.
T Consensus 398 ~~qLrg~~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 398 LHELRRRGGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred HHHHhhcCCCEEEEEEccccChhhEEEEEe
Confidence 553222466777765555554456677764
No 169
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=90.03 E-value=1.2 Score=36.71 Aligned_cols=75 Identities=19% Similarity=0.355 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeec--------ccchhHHHHHHHHHHH
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSG--------MGCSAGILSISLVKDL 153 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~gC~~~~~aL~~A~~~ 153 (401)
...|++++|+++|++++|||.+=..- .+-...-...+.||+.+ ..+++++ .||+|....++.+.++
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~E----aFA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L 97 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINE----AFAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQL 97 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE------SBHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccc----hhhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHH
Confidence 35899999999999999999885432 12223345677788753 3444432 3566666666666666
Q ss_pred HHcCCCCeEE
Q 044359 154 LKVHKNSLAL 163 (401)
Q Consensus 154 i~~g~~~~vL 163 (401)
-..+ .++.+
T Consensus 98 ~~~~-~~~gl 106 (123)
T PF02803_consen 98 RRRG-GRYGL 106 (123)
T ss_dssp HHHT-TSEEE
T ss_pred HHhc-hhhhh
Confidence 5544 34444
No 170
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=89.85 E-value=1.7 Score=43.29 Aligned_cols=89 Identities=12% Similarity=0.025 Sum_probs=52.5
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEE-Ee
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQ-IA 364 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll-~~ 364 (401)
+++. ++|||.+=+|-.-....-...+.||++.+++..+ -=.--+||-..||=...+.++..+=+-+.+.+.+. +.
T Consensus 298 Agl~---~~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~-GG~la~GHP~GatG~~~~~~l~~qL~~~~~~~g~~~~c 373 (388)
T PRK06366 298 QNKS---IDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVN-GGAVAIGHPIGNSGSRIIVTLINALKTRHMKTGLATLC 373 (388)
T ss_pred cCCC---HHHcceeeccchhHHHHHHHHHHhCCCCCccCCC-CchhhhCCCcCCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 3665 7999999999987776667889999988877532 11344678766654444444433211122334332 33
Q ss_pred eccchhhcceeeeee
Q 044359 365 FGSGFKVNSAVWKCV 379 (401)
Q Consensus 365 ~G~G~s~~~~~l~~~ 379 (401)
.|.|.. .+++++..
T Consensus 374 ~~gg~g-~a~~~e~~ 387 (388)
T PRK06366 374 HGGGGA-HTLTLEMV 387 (388)
T ss_pred cccChh-hEEEEEec
Confidence 444443 45666653
No 171
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=89.67 E-value=1.5 Score=43.94 Aligned_cols=51 Identities=14% Similarity=0.300 Sum_probs=34.8
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeec
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
..|++++|+++|++++|||.+-..- ..+...-...+.||+.+....+..++
T Consensus 300 ~~a~~~al~~Agl~~~DId~~ei~D----~f~~~~l~~~e~lg~~~~~~pvN~~G 350 (401)
T PRK09050 300 APATRKLLARLGLTIDQFDVIELNE----AFAAQGLAVLRQLGLADDDARVNPNG 350 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCccccCc----HhHHHHHHHHHHcCCCCCCCCEeCCC
Confidence 5799999999999999999875221 12233345667899854334556554
No 172
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=89.32 E-value=0.74 Score=45.24 Aligned_cols=87 Identities=9% Similarity=0.088 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCC-CCcceEE----eecccchhHHHHHHHHHHHHH
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFR-SNIKSIN----LSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~-~~~~~~~----i~~~gC~~~~~aL~~A~~~i~ 155 (401)
..++.+++|+++|++++|||.|+.. +.+.+.....+..+.+-+|-. ...+... +...+.+++...+-.+...++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 4589999999999999999999854 322221112233344444421 1112211 221334444444555556666
Q ss_pred cC--CCCeEEEEeec
Q 044359 156 VH--KNSLALVLSME 168 (401)
Q Consensus 156 ~g--~~~~vLvv~~e 168 (401)
.| +..++||.++.
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 66 46789988854
No 173
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=88.83 E-value=1.1 Score=44.10 Aligned_cols=87 Identities=11% Similarity=0.180 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHhC--CCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcc------eEEeecccchhHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKH--KINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIK------SINLSGMGCSAGILSIS 148 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~a--g~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~------~~~i~~~gC~~~~~aL~ 148 (401)
...+...++++++|+++ |++++|||.+++... ....-..++++||+++... .-+..|+++++...+|.
T Consensus 256 ~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~----~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~ 331 (361)
T cd00831 256 LVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPG----GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLA 331 (361)
T ss_pred HHHHHHHHHHHHHhccccCCCccccceEEEECCC----ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHH
Confidence 34556778899999999 999999999987642 2234456899999974321 22444456666666665
Q ss_pred HHHHHHHcCCCCeEEEEee
Q 044359 149 LVKDLLKVHKNSLALVLSM 167 (401)
Q Consensus 149 ~A~~~i~~g~~~~vLvv~~ 167 (401)
.+..-=+-.+.+++|+++.
T Consensus 332 ~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 332 YMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHhCCCCCCCEEEEEEE
Confidence 5533211124678887774
No 174
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=87.93 E-value=5.1 Score=44.91 Aligned_cols=126 Identities=14% Similarity=0.148 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCE----EEE-eeec---C-----------CCCCc-HHHHHHHHcCC--CCCcceEEe
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDI----LVT-NCSI---F-----------CPTPS-ISSMIINKFGF--RSNIKSINL 135 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~----li~-~s~~---~-----------~~~p~-~a~~l~~~LGl--~~~~~~~~i 135 (401)
...|-.++.-+|+-++||+|.++.. +.. ++.+ + |.+-+ .-++.++++-. .-.-+.|.+
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~ 166 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSV 166 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhh
Confidence 4678899999999999999987642 222 2211 1 11111 12344555431 123567777
Q ss_pred ecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC---CCC---C--C-C-----cchhhhhhcccccceEEEEecC
Q 044359 136 SGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN---GYT---G--S-T-----KSMLISNTVFRMGGAAILLSNR 201 (401)
Q Consensus 136 ~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~---~~~---~--~-d-----~~~~i~~~lfGDGAaA~ll~~~ 201 (401)
. .+|++.+.||+.|.+-++.|.++.++|-++...-.. +++ + + | .+.-=....=+||++|++|.+.
T Consensus 167 D-tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk 245 (2376)
T KOG1202|consen 167 D-TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRK 245 (2376)
T ss_pred h-hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEehh
Confidence 7 699999999999999999999999999888764321 111 0 0 0 0000124566899999999987
Q ss_pred CCC
Q 044359 202 QQD 204 (401)
Q Consensus 202 ~~~ 204 (401)
...
T Consensus 246 ~~A 248 (2376)
T KOG1202|consen 246 SLA 248 (2376)
T ss_pred HHH
Confidence 654
No 175
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=87.76 E-value=3 Score=41.62 Aligned_cols=50 Identities=14% Similarity=0.083 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEee
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLS 136 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~ 136 (401)
-...|++++|+++|++++|||.+=+.- .++...-...+.||+.. ..++.+
T Consensus 286 ~~~~a~~~al~~agl~~~did~~ei~d----~F~~~~l~~~e~lg~~~--~pvN~~ 335 (387)
T PRK07850 286 GPVQATAKVLEKAGMKIGDIDLVEINE----AFASVVLSWAQVHEPDM--DKVNVN 335 (387)
T ss_pred hHHHHHHHHHHHcCCCHHHcCeeeecc----cchHHHHHHHHHcCCCC--CCcCCC
Confidence 346899999999999999999885432 12222334457888753 244444
No 176
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=87.55 E-value=2.6 Score=38.77 Aligned_cols=87 Identities=16% Similarity=0.133 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCC---CCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFR---SNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~---~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
....++++++|+++|++++|||.++... .+...............+.. .....-.+.+.+++++...|..+...++
T Consensus 145 ~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~ 224 (254)
T cd00327 145 EGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLE 224 (254)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHh
Confidence 4567889999999999999999987653 22111111111111122221 0111223344566667766666666565
Q ss_pred cC-------CCCeEEEEe
Q 044359 156 VH-------KNSLALVLS 166 (401)
Q Consensus 156 ~g-------~~~~vLvv~ 166 (401)
.+ +.+++|+.+
T Consensus 225 ~~~~~~~~~~~~~~l~~~ 242 (254)
T cd00327 225 HEFIPPTPREPRTVLLLG 242 (254)
T ss_pred CCCcCCCCCCcCEEEEee
Confidence 54 345555544
No 177
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=87.00 E-value=3.3 Score=40.90 Aligned_cols=76 Identities=16% Similarity=0.164 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEee--------cccchhHHHHHHHHHH
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLS--------GMGCSAGILSISLVKD 152 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~--------~~gC~~~~~aL~~A~~ 152 (401)
-...|++++|+++|++++|||.+...- ..........+.||+.+ ..+..+ -.|++|......+..+
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~q 332 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQ 332 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHH
Confidence 456799999999999999999986532 12233345667888863 233332 1366666666666666
Q ss_pred HHHcCCCCeEE
Q 044359 153 LLKVHKNSLAL 163 (401)
Q Consensus 153 ~i~~g~~~~vL 163 (401)
+-+.+ .++.+
T Consensus 333 l~~~~-~~~g~ 342 (361)
T PRK06690 333 AKRED-MKYGI 342 (361)
T ss_pred HHHhC-CCEEE
Confidence 65543 34433
No 178
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=86.50 E-value=2.4 Score=41.77 Aligned_cols=82 Identities=11% Similarity=0.081 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceE---E-eecccchhHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSI---N-LSGMGCSAGILSISLVKD 152 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~---~-i~~~gC~~~~~aL~~A~~ 152 (401)
.+......+++++|+++|++++|||++++.. ..+..-..+.++||++++.... + ..|++.++...+|. +
T Consensus 239 ~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ----~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~---~ 311 (353)
T PRK12880 239 MALECEPKSFKEILEFSKVDEKDIAFHLFHQ----SNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLC---E 311 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHH---H
Confidence 4456667789999999999999999998754 1233456799999998543321 2 22344444445554 3
Q ss_pred HHHcCCCCeEEEEe
Q 044359 153 LLKVHKNSLALVLS 166 (401)
Q Consensus 153 ~i~~g~~~~vLvv~ 166 (401)
.+..+..+ +|+++
T Consensus 312 ~~~~~~~~-~ll~~ 324 (353)
T PRK12880 312 LDTPKEFK-ASLSA 324 (353)
T ss_pred HHHcCCcE-EEEEE
Confidence 35555443 44444
No 179
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=86.26 E-value=2.4 Score=43.82 Aligned_cols=80 Identities=15% Similarity=0.182 Sum_probs=50.6
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCC-cceEEeec-------ccchhHHHHHHHHHHHH
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSN-IKSINLSG-------MGCSAGILSISLVKDLL 154 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~-~~~~~i~~-------~gC~~~~~aL~~A~~~i 154 (401)
..|+++|++++|++++|||.+-+-. .+|.......+.|||.++ -..+.+++ .+.+.++..+--+...|
T Consensus 295 ~~aa~~a~~~AGi~~~Did~~elyd----cF~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QL 370 (498)
T PRK08257 295 RAAGRRALALAGLGIDDIDAFDLYS----CFPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERL 370 (498)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEecc----CCHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHH
Confidence 4699999999999999999985433 144444566789998643 12444443 11222455555555666
Q ss_pred HcCCCCeEEEEe
Q 044359 155 KVHKNSLALVLS 166 (401)
Q Consensus 155 ~~g~~~~vLvv~ 166 (401)
+....++.|+.+
T Consensus 371 Rg~~~~~gLv~~ 382 (498)
T PRK08257 371 RANPGRRGLVTA 382 (498)
T ss_pred hhcCCCEEEEEC
Confidence 655567777655
No 180
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=85.75 E-value=3 Score=41.57 Aligned_cols=42 Identities=12% Similarity=0.226 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
...|+++||+++|++|+|||.+-..- ..........+.||+.
T Consensus 287 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~~~~~e~lg~~ 328 (386)
T cd00751 287 PVPAIPKALKRAGLTLDDIDLIEINE----AFAAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeec----hhHHHHHHHHHHhCCC
Confidence 35899999999999999999885421 0112234456778875
No 181
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=85.60 E-value=7 Score=38.98 Aligned_cols=87 Identities=13% Similarity=-0.078 Sum_probs=50.7
Q ss_pred CCCcchhhhcceEeecCCChHHHHHHHHHcCC-Cc--hhhhhhHHHHhhhcCcccchHHHHHHHHHHc-CCCCCCCeEEE
Q 044359 287 TYVPNFKKAFEHFCIHAGGRAIIDAVEENLKL-SK--EDGEASRMTLYRFGNTSSSSYWYELCYLEAK-GKVKKGDRVWQ 362 (401)
Q Consensus 287 ~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi-~~--e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~-g~l~~Gd~vll 362 (401)
++. ++|||++=+|-.-....-...+.||+ ++ +++..+ --.--+||-..||=...+.++.+. ++ +.+.+.+.
T Consensus 294 Gi~---p~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~-GG~la~GhP~GATG~r~v~~l~~~l~~-~~~~~Gl~ 368 (385)
T TIGR02445 294 GLS---ISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLN-GGAIALGHPLGCSGARISTTLLNLMEQ-KDATFGLA 368 (385)
T ss_pred CCC---HHHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCC-CchhhcCCCccccHHHHHHHHHHHHHh-cCCCeEEE
Confidence 565 79999999999876666677899998 43 455321 123446887666544444443332 22 33445555
Q ss_pred Eeeccchhhcceeeee
Q 044359 363 IAFGSGFKVNSAVWKC 378 (401)
Q Consensus 363 ~~~G~G~s~~~~~l~~ 378 (401)
...|.|-.-.+++++.
T Consensus 369 ~~~~g~g~g~a~~~e~ 384 (385)
T TIGR02445 369 TMCIGLGQGIATVFER 384 (385)
T ss_pred EEecccChhheEEEEe
Confidence 4444444445566653
No 182
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=85.22 E-value=5.7 Score=39.63 Aligned_cols=87 Identities=13% Similarity=-0.089 Sum_probs=50.4
Q ss_pred CCCcchhhhcceEeecCCChHHHHHHHHHcCC-Cc--hhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEE
Q 044359 287 TYVPNFKKAFEHFCIHAGGRAIIDAVEENLKL-SK--EDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQI 363 (401)
Q Consensus 287 ~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi-~~--e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~ 363 (401)
++. ++|||++=+|-.-....-...+.||+ ++ +++..+ --.--+||...|+=...+.++.++-+-+.+.+.+.-
T Consensus 296 gl~---~~DId~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~GhP~GAtG~~~v~~l~~~L~~~~~~~gl~~ 371 (387)
T PRK08947 296 GLS---ISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLN-GGAIALGHPLGCSGARISTTLLNLMERKDAQFGLAT 371 (387)
T ss_pred CCC---HHHCCEEEecccchHHHHHHHHHcCCCCCCCCCcCCC-CchhhcCCCccccHHHHHHHHHHHHHhcCCCEEEEE
Confidence 565 79999999999877776778899998 43 455321 123457888777655555554443111333444443
Q ss_pred eeccchhhcceeee
Q 044359 364 AFGSGFKVNSAVWK 377 (401)
Q Consensus 364 ~~G~G~s~~~~~l~ 377 (401)
..|.|-...+++++
T Consensus 372 ~~~g~G~g~a~~~e 385 (387)
T PRK08947 372 MCIGLGQGIATVFE 385 (387)
T ss_pred EeecccceeEEEEE
Confidence 34433223444544
No 183
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=84.71 E-value=3 Score=40.05 Aligned_cols=88 Identities=16% Similarity=0.233 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCC-cc------eEEeecccchhHHHHH
Q 044359 75 REETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSN-IK------SINLSGMGCSAGILSI 147 (401)
Q Consensus 75 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~-~~------~~~i~~~gC~~~~~aL 147 (401)
.+.......++++++|++++++ +|||.++...... +..-..+.++|++++. .. .-.+.|++|++...+|
T Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L 293 (324)
T cd00827 218 FEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGL 293 (324)
T ss_pred HHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHH
Confidence 3456677889999999999999 9999887554211 1455678899997421 11 2223335555555555
Q ss_pred HHHHHHHHcC---CCCeEEEEeecc
Q 044359 148 SLVKDLLKVH---KNSLALVLSMEA 169 (401)
Q Consensus 148 ~~A~~~i~~g---~~~~vLvv~~e~ 169 (401)
..+ +..+ +.+++|+++.-.
T Consensus 294 ~~~---~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 294 ASL---LESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HHH---HhcCCCCCCCEEEEEEecc
Confidence 544 3333 367888887543
No 184
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=83.96 E-value=5.1 Score=40.07 Aligned_cols=76 Identities=18% Similarity=0.300 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeec--------ccchhHHHHHHHHHHH
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSG--------MGCSAGILSISLVKDL 153 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~gC~~~~~aL~~A~~~ 153 (401)
...|+++||+++|++++|||.+=+.- ..+...-...+.||+.+. .+..++ .||+|...-++++.++
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~~--~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDPE--TVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCcc--ccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 35799999999999999999875332 133344556778887632 344432 2455555555566555
Q ss_pred HHcCCCCeEEE
Q 044359 154 LKVHKNSLALV 164 (401)
Q Consensus 154 i~~g~~~~vLv 164 (401)
-..+ .++.|+
T Consensus 368 ~~~~-~~~gl~ 377 (394)
T PRK06445 368 QIKG-KDYGVA 377 (394)
T ss_pred HhcC-CCEEEE
Confidence 4322 344443
No 185
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=83.58 E-value=5 Score=40.10 Aligned_cols=41 Identities=15% Similarity=0.214 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
..|++++|+++|++++|||.+-..- ..+.......+.||+.
T Consensus 294 ~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~ 334 (393)
T PRK05656 294 VSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWD 334 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCC
Confidence 5899999999999999999886421 1223344566788874
No 186
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=83.23 E-value=4.3 Score=37.11 Aligned_cols=79 Identities=15% Similarity=0.163 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCC-CcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcC
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPT-PSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVH 157 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~-p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g 157 (401)
.+.....++.+|.++|++..|||.|+++..|+.+. --++.-+++-|.+..+++.+.|+. |+....-....
T Consensus 38 se~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss---------L~~~A~~~~~~ 108 (220)
T COG1214 38 AERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS---------LEALAQGGAEK 108 (220)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH---------HHHHHHhhhcc
Confidence 36667899999999999999999999998765432 234455556566655678888885 33333333333
Q ss_pred CCCeEEEEe
Q 044359 158 KNSLALVLS 166 (401)
Q Consensus 158 ~~~~vLvv~ 166 (401)
+...++|..
T Consensus 109 ~~~~v~v~i 117 (220)
T COG1214 109 NAGFVLVAI 117 (220)
T ss_pred CCCceEEEE
Confidence 455555533
No 187
>PLN03169 chalcone synthase family protein; Provisional
Probab=82.99 E-value=4.9 Score=40.18 Aligned_cols=88 Identities=14% Similarity=0.191 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcce------EEeecccchhHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKS------INLSGMGCSAGILSISLVK 151 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~------~~i~~~gC~~~~~aL~~A~ 151 (401)
+..-..+.++++|+++|++++|||.+.+.-.+. ...+-..++++||++++... -+..|+++++-..+|+.+.
T Consensus 279 ~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~--n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~ 356 (391)
T PLN03169 279 IEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPG--GPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMR 356 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcceEEecCC--CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHH
Confidence 444555677999999999999999443332221 23456678999999854332 2455577777777776654
Q ss_pred HH--HH-cCCCCeEEEEee
Q 044359 152 DL--LK-VHKNSLALVLSM 167 (401)
Q Consensus 152 ~~--i~-~g~~~~vLvv~~ 167 (401)
.- ++ ..+.+++|+++.
T Consensus 357 ~~~~~~~~~~gd~~ll~af 375 (391)
T PLN03169 357 EELKKKGEEDEEWGLILAF 375 (391)
T ss_pred HhhcccCCCCCcEEEEEEE
Confidence 32 11 113467776663
No 188
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=82.59 E-value=4.8 Score=40.00 Aligned_cols=30 Identities=3% Similarity=0.008 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEee
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNC 107 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s 107 (401)
..+...++.++.|+++|++++|||.+++..
T Consensus 203 y~~~~~~~~~~~l~~~g~~~~did~~i~H~ 232 (379)
T TIGR01835 203 YLNAFENAWNDYAKRTGLSLADFAAFCFHV 232 (379)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHcCEEEECC
Confidence 345567889999999999999999998764
No 189
>PRK05790 putative acyltransferase; Provisional
Probab=82.26 E-value=6.1 Score=39.45 Aligned_cols=42 Identities=12% Similarity=0.196 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
...|+++||+++|++++|||.+-..- ......-...+.||+.
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~l~~~e~lg~~ 334 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEINE----AFAAQALAVEKELGLD 334 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCC
Confidence 34799999999999999999885321 1222333456778874
No 190
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=81.70 E-value=5.5 Score=39.32 Aligned_cols=44 Identities=14% Similarity=0.144 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRS 128 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~ 128 (401)
-...|++++|+++|++++|||.+-... ..+...-...+.||+.+
T Consensus 252 ~~~~a~~~al~~Agl~~~did~~ei~d----~F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 252 AARLAARRAYKMAGITPDDIDVAELYD----CFTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCCC
Confidence 345899999999999999999885432 13344456677888764
No 191
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=81.37 E-value=6.5 Score=39.43 Aligned_cols=88 Identities=9% Similarity=-0.056 Sum_probs=48.7
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcCCCc--hhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCe-EEE
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSK--EDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDR-VWQ 362 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~--e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~-vll 362 (401)
+|+. ++|||.+=+|-.-.-..-...+.||+.. .++..+ -=.--+||...|+=...+.++..+=+=+.|.+ +..
T Consensus 309 agl~---~~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~-GG~la~GhP~gAtG~~~~~el~~qL~~~~~~~~~~~ 384 (401)
T PRK08131 309 AGLT---LDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPN-GGAIAVGHPLGASGARLALTAARELQRRGKRYAVVS 384 (401)
T ss_pred cCCC---HHHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCC-ccHHhcCCchhhhHHHHHHHHHHHHHhcCCCceEEE
Confidence 3565 7999999999875444445678999853 344311 11235899877666555555443211112233 333
Q ss_pred Eeeccchhhcceeeee
Q 044359 363 IAFGSGFKVNSAVWKC 378 (401)
Q Consensus 363 ~~~G~G~s~~~~~l~~ 378 (401)
+..|.|.. .+++++.
T Consensus 385 ~~~ggg~g-~a~i~e~ 399 (401)
T PRK08131 385 LCIGVGQG-LAMVIER 399 (401)
T ss_pred EEecCChh-hEEEEEe
Confidence 34444444 3456654
No 192
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=81.06 E-value=11 Score=37.44 Aligned_cols=61 Identities=10% Similarity=-0.045 Sum_probs=40.9
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcCCCch------------------hhhhhHHHHhhhcCcccchHHHHHHH
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKE------------------DGEASRMTLYRFGNTSSSSYWYELCY 347 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~e------------------~~~~s~~~~~~~Gn~~sasi~~~L~~ 347 (401)
+|+. ++|||.+-+|-.-...--...+.||+.+. ++..+ -=.--+||-..|+=...+.+
T Consensus 270 Agi~---~~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~GhP~gatG~~~v~e 345 (385)
T PRK12578 270 AKVT---PNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLF-GGLKAKGHPLGATGLSMIYE 345 (385)
T ss_pred cCCC---HHHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCC-CCcccCCCCccHHHHHHHHH
Confidence 3565 79999999999987777778899998752 22100 01234789877766666665
Q ss_pred HHH
Q 044359 348 LEA 350 (401)
Q Consensus 348 ~~~ 350 (401)
+.+
T Consensus 346 ~~~ 348 (385)
T PRK12578 346 ITK 348 (385)
T ss_pred HHH
Confidence 543
No 193
>PRK09051 beta-ketothiolase; Provisional
Probab=80.92 E-value=5.6 Score=39.80 Aligned_cols=50 Identities=12% Similarity=0.275 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeec
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
...|++++|+++|++++|||.+=.. + ..........+.||+.+ ..+..++
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~---d-~f~~~~~~~~e~lg~~~--~~vN~~G 343 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEAN---E-AFAAQACAVTRELGLDP--AKVNPNG 343 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec---C-ccHHHHHHHHHHhCCCc--cccCCCc
Confidence 3689999999999999999988542 1 12333445667899853 3444443
No 194
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=80.13 E-value=6.3 Score=38.28 Aligned_cols=64 Identities=11% Similarity=0.122 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC-cHHHHHHHHcCCCCCcceEEeecccchhHHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP-SISSMIINKFGFRSNIKSINLSGMGCSAGIL 145 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p-~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~ 145 (401)
+-.....+++|+++|++.+|||+|-+...|+...+ ......++.|.+.-+.|.+.|+ .|-|=+.
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T~gPGL~gaL~VG~~~Ak~LA~a~~kPli~Vn--H~~gHi~ 116 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVTAGPGLGGALLVGATAAKALALALNKPLIPVN--HLEGHIE 116 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEecCCCchhHHHHHHHHHHHHHHHhCCCEeecc--hHHHHHH
Confidence 34457889999999999999999988777764221 1223445555544457788998 5666544
No 195
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=79.86 E-value=5.2 Score=36.49 Aligned_cols=63 Identities=14% Similarity=0.221 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCc-HHHHHHHHcCCCCCcceEEeecccchhHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPS-ISSMIINKFGFRSNIKSINLSGMGCSAGI 144 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~-~a~~l~~~LGl~~~~~~~~i~~~gC~~~~ 144 (401)
+....-++.+|++++++.+|||.+.+.-.|+.-.|- ....+++-|-+--+.+.+.++ .|-+-+
T Consensus 51 ~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VN--HCigHI 114 (336)
T KOG2708|consen 51 AWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVN--HCIGHI 114 (336)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccch--hhhhhh
Confidence 344556788999999999999988777667665563 334455555532256777777 676543
No 196
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=79.12 E-value=10 Score=38.50 Aligned_cols=88 Identities=8% Similarity=-0.039 Sum_probs=47.8
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcC-----------------CCchhhhhhHHHHhhhcCcccchHHHHHHHH
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLK-----------------LSKEDGEASRMTLYRFGNTSSSSYWYELCYL 348 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lg-----------------i~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~ 348 (401)
+++. ++|||.+=+|-.-....-...+.|| ++.+++..+ -=.--+||...|+=...+.++
T Consensus 324 Agl~---~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~-GG~la~GhP~gatG~~~v~e~ 399 (430)
T TIGR02446 324 AGLA---LSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVL-GGSIAYGHPFAATGARMITQT 399 (430)
T ss_pred cCCC---HHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCC-CCHHhcCCCccccHHHHHHHH
Confidence 3565 7999999999986554445566665 444444321 113447898877766666555
Q ss_pred HHcCCCCCCCe-EEEEeeccchhhcceeeee
Q 044359 349 EAKGKVKKGDR-VWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 349 ~~~g~l~~Gd~-vll~~~G~G~s~~~~~l~~ 378 (401)
.++=+-+.|.+ +.+...|.|. -.+++++.
T Consensus 400 ~~qL~g~ag~~g~~~~~~~GG~-g~a~iie~ 429 (430)
T TIGR02446 400 LRELKRRGGGLGLNTACAAGGL-GAAMILEV 429 (430)
T ss_pred HHHHhhcCCCccEEEEEecCcc-eEEEEEEe
Confidence 44211123333 2233333343 35556654
No 197
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=77.69 E-value=6.7 Score=39.18 Aligned_cols=71 Identities=20% Similarity=0.391 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeec--------ccchhHHHHHHHHHH
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSG--------MGCSAGILSISLVKD 152 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~gC~~~~~aL~~A~~ 152 (401)
-...|++++|+++|++++|||.+-..- ..+...-...+.||+.+ ..+.+++ .|++|....++++.+
T Consensus 290 ~~~~a~~~al~~agl~~~did~~ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~q 363 (391)
T PRK07661 290 GPIAAIPKALKLAGLELSDIGLFELNE----AFASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHE 363 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCC----HHHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHH
Confidence 346899999999999999999886321 12222233446788742 2233332 244444444555555
Q ss_pred HHHcC
Q 044359 153 LLKVH 157 (401)
Q Consensus 153 ~i~~g 157 (401)
+-+.+
T Consensus 364 L~~~~ 368 (391)
T PRK07661 364 MKRRN 368 (391)
T ss_pred HHhcC
Confidence 54433
No 198
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=77.31 E-value=1.4 Score=35.98 Aligned_cols=77 Identities=17% Similarity=0.215 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCC---CcceEEee----cccchhHHHHHHHHHH
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRS---NIKSINLS----GMGCSAGILSISLVKD 152 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~---~~~~~~i~----~~gC~~~~~aL~~A~~ 152 (401)
-..++.+++|+++|++|+|||.|.... .+...-+.-+..+.+-++-.. .++...+. ...+++++..|-.+..
T Consensus 26 ~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l 105 (119)
T PF02801_consen 26 ALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALL 105 (119)
T ss_dssp HHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHH
Confidence 346889999999999999999998543 221111223344555454321 12222221 1355666666666666
Q ss_pred HHHcC
Q 044359 153 LLKVH 157 (401)
Q Consensus 153 ~i~~g 157 (401)
.++.+
T Consensus 106 ~l~~~ 110 (119)
T PF02801_consen 106 ALEHG 110 (119)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 66654
No 199
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=76.80 E-value=8.1 Score=38.46 Aligned_cols=42 Identities=17% Similarity=0.238 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
...|++++|+++|++++|||.+-...+ .+.......+.||+.
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d~----ft~~~~~~~e~lgl~ 301 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHDC----FTIAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCC----CcHHHHHHHHHcCCC
Confidence 347999999999999999998853321 112344567778874
No 200
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=76.17 E-value=4.7 Score=40.52 Aligned_cols=75 Identities=17% Similarity=0.224 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEE-eeecCCCCCcHHHHHHHHcCCCCC-c---ceEEeecccchhHHHHHHHHHHHHH
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVT-NCSIFCPTPSISSMIINKFGFRSN-I---KSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~l~~~LGl~~~-~---~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
=+.+|.+.||+++|++++|||.|-. +|++..--..-+..|.+-+|-... . ..-...+ .|.|..-+++.+..++.
T Consensus 277 Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tG-H~lGAaGaveai~~~l~ 355 (412)
T COG0304 277 GAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTG-HTLGAAGAVEAIISLLA 355 (412)
T ss_pred hHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccc-cChhhHHHHHHHHHHHH
Confidence 3569999999999999999999984 455543334444556666663211 0 1122232 45555555565555554
Q ss_pred c
Q 044359 156 V 156 (401)
Q Consensus 156 ~ 156 (401)
-
T Consensus 356 l 356 (412)
T COG0304 356 L 356 (412)
T ss_pred H
Confidence 3
No 201
>PLN02287 3-ketoacyl-CoA thiolase
Probab=76.01 E-value=6.6 Score=40.04 Aligned_cols=94 Identities=14% Similarity=0.055 Sum_probs=58.3
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCC--CeEEE-
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKG--DRVWQ- 362 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~G--d~vll- 362 (401)
+|+. ++|||++=+|-.-....-...+.||+.++++..+ --.--+||...||=...+.++..+=+-+.| .+.|.
T Consensus 344 Agl~---~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~s-GG~la~GHp~gAsG~~~v~~l~~qL~~~~~~~~~gl~~ 419 (452)
T PLN02287 344 AGLE---LDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVN-GGAIALGHPLGATGARCVATLLHEMKRRGKDCRFGVVS 419 (452)
T ss_pred cCCC---HHHCCEEEecchHHHHHHHHHHHcCCCccccCCC-CcHHhccCcHHHHHHHHHHHHHHHHHhcCCCCCeeEEE
Confidence 3665 7999999998664444345678999988777532 234557998777766655555442111223 34443
Q ss_pred EeeccchhhcceeeeeeccCCc
Q 044359 363 IAFGSGFKVNSAVWKCVSNLDP 384 (401)
Q Consensus 363 ~~~G~G~s~~~~~l~~~~~~~~ 384 (401)
+..|.|. -.+++++....+|.
T Consensus 420 ~c~ggG~-g~a~~ie~~~~~~~ 440 (452)
T PLN02287 420 MCIGTGM-GAAAVFERGDSVDE 440 (452)
T ss_pred EccccCc-eeEEEEEecCchhh
Confidence 3344444 35788888887765
No 202
>PRK09604 UGMP family protein; Validated
Probab=75.67 E-value=9 Score=37.36 Aligned_cols=55 Identities=11% Similarity=0.134 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC-----cHHHHHHHHcCCCCCcceEEeec
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP-----SISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p-----~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
.+.....++++|+++|++++|||.|.++..|+.... +.|..++..++. +.+.++.
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i----pl~~v~h 111 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK----PLIGVNH 111 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC----CEEeecC
Confidence 456668889999999999999999998876654221 234445555544 4455543
No 203
>PRK06059 lipid-transfer protein; Provisional
Probab=75.11 E-value=20 Score=35.88 Aligned_cols=42 Identities=10% Similarity=0.164 Sum_probs=28.4
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCC
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRS 128 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~ 128 (401)
..|++++++++|++++|||.+=.--. .........+.||+.+
T Consensus 276 ~~a~~~a~~~agl~~~Did~~El~d~----f~~~~l~~~e~lGl~~ 317 (399)
T PRK06059 276 DQILDAAYAEAGIGPEDLSLAEVYDL----STALELDWYEHLGLCP 317 (399)
T ss_pred HHHHHHHHHHcCCCHHHCcEEeeccc----ChHHHHHHHHHcCCCC
Confidence 47899999999999999998843221 1112223347788763
No 204
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=74.41 E-value=19 Score=36.38 Aligned_cols=25 Identities=16% Similarity=0.231 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEE
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVT 105 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~ 105 (401)
....|+++|++++|++++|||.+=+
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei 334 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEI 334 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 4457999999999999999998854
No 205
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=73.90 E-value=9 Score=38.15 Aligned_cols=41 Identities=17% Similarity=0.244 Sum_probs=28.3
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
..|+++||+++|++|+|||.+-..-+ .+...-...+.||+.
T Consensus 289 ~~a~~~a~~~Agi~~~did~~e~~d~----fa~~~~~~~e~lG~~ 329 (386)
T TIGR01930 289 VPAIPKALKKAGLSISDIDLFEINEA----FAAQVLACIKELGLD 329 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCeeehcch----hHHHHHHHHHHhCCC
Confidence 58999999999999999998843211 122223345778874
No 206
>PRK06158 thiolase; Provisional
Probab=73.54 E-value=12 Score=37.34 Aligned_cols=41 Identities=12% Similarity=0.248 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEE-eeecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVT-NCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
...|+++|++++|++|+|||.+=+ -+ ++...-...+.||+.
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~ElyD~-----Fs~~~l~~~E~lG~~ 297 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVELYDA-----FTINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecCC-----chHHHHHHHHHcCCC
Confidence 467999999999999999998843 23 222334455677764
No 207
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=73.41 E-value=17 Score=36.77 Aligned_cols=19 Identities=16% Similarity=0.322 Sum_probs=15.6
Q ss_pred hhhcccccceEEEEecCCC
Q 044359 185 SNTVFRMGGAAILLSNRQQ 203 (401)
Q Consensus 185 ~~~lfGDGAaA~ll~~~~~ 203 (401)
.++..+|||+|+||.+.+.
T Consensus 262 ~~s~~~DGAaA~vl~s~e~ 280 (426)
T PRK08170 262 NSSQITDGACWLLLASEEA 280 (426)
T ss_pred ccCCCCCceEEEEEecHHH
Confidence 4577899999999998653
No 208
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=72.64 E-value=8.2 Score=38.48 Aligned_cols=43 Identities=7% Similarity=0.029 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRS 128 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~ 128 (401)
...|+++||+++|++|+|||.+-..- ..+.......+.||+.+
T Consensus 262 ~~~a~~~a~~~agl~~~did~~e~~d----~f~~~~~~~~e~lg~~~ 304 (389)
T PRK07516 262 PRRAWQRALAQAGVTLDDLSFVETHD----CFTIAELIEYEAMGLAP 304 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEec----CCCHHHHHHHHHcCCCC
Confidence 35799999999999999999885432 12333445667777753
No 209
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=71.90 E-value=11 Score=37.80 Aligned_cols=44 Identities=9% Similarity=-0.004 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGF 126 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl 126 (401)
..++.++||+++|+ ++|||.|... |.+..--..-...|.+.++.
T Consensus 282 ~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~ 326 (398)
T PRK06519 282 LEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAG 326 (398)
T ss_pred HHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCC
Confidence 46899999999999 8999998744 43322222334456666664
No 210
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=71.57 E-value=16 Score=29.87 Aligned_cols=55 Identities=11% Similarity=0.296 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecC--CCCCcHHHHHHHHc-CCCCCcceEEeec
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIF--CPTPSISSMIINKF-GFRSNIKSINLSG 137 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~l~~~L-Gl~~~~~~~~i~~ 137 (401)
.+=..+-.++.+++.+++++||-.++|+.++| ...|.. .++++ |+. +++.+....
T Consensus 19 ~~at~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~---a~R~~~g~~-~Vpl~c~~E 76 (118)
T PF07736_consen 19 LEATRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAA---AARELPGWD-DVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCH---HHHHTTTGT-TSEEEEEE-
T ss_pred HHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHH---HHHccCCCC-ccceeccCc
Confidence 33344555677888999999999999988775 346664 44466 887 788877764
No 211
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=70.90 E-value=13 Score=35.81 Aligned_cols=58 Identities=9% Similarity=0.138 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC-cHHHHHHHHcCCCCCcceEEeec
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP-SISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p-~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
+......+++|+++|++++|||.|.++..|+.... ..+...++.|....+++.+.++.
T Consensus 50 ~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~Ak~la~~~~~p~~~v~h 108 (305)
T TIGR00329 50 ENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATFARSLALSLDKPLIGVNH 108 (305)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHHHHHHHHHhCCCEeeccc
Confidence 45567889999999999999999998887764322 12222334333322445666654
No 212
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=69.97 E-value=15 Score=36.63 Aligned_cols=41 Identities=10% Similarity=0.131 Sum_probs=28.8
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
..+++++|+++|++++|||.+=..- ......-...+.||+.
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d----~f~~~~l~~~e~lg~~ 334 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINE----AFSVVALANQKLLGLD 334 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCC
Confidence 4699999999999999999886421 1222334456678874
No 213
>PRK08256 lipid-transfer protein; Provisional
Probab=69.81 E-value=14 Score=36.92 Aligned_cols=43 Identities=12% Similarity=0.194 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRS 128 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~ 128 (401)
...|++++++++|++++|||.+-+-- .++...-...+.||+.+
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d----~f~~~~l~~le~lg~~~ 308 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHD----CFSANELLTYEALGLCP 308 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeecc----CCcHHHHHHHHHcCCCC
Confidence 45799999999999999999875432 12333445667888764
No 214
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=69.21 E-value=14 Score=35.62 Aligned_cols=59 Identities=10% Similarity=0.120 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC-cHHHHHHHHcCCCCCcceEEeec
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP-SISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p-~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
.+.....++++|++++++.+|||.|.++..|+.+.. -.+...++-|....+++.+.++.
T Consensus 50 ~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~~p~~~v~h 109 (314)
T TIGR03723 50 LEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALNKPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCCEEeccc
Confidence 345568889999999999999999998877764321 12233344443322455666664
No 215
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=68.90 E-value=72 Score=31.86 Aligned_cols=55 Identities=15% Similarity=-0.049 Sum_probs=36.3
Q ss_pred hhcceEeecCCChHHHHHHHHHcCCCchhhhhhHHHH-------------------hhhcCcccchHHHHHHHHHH
Q 044359 294 KAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTL-------------------YRFGNTSSSSYWYELCYLEA 350 (401)
Q Consensus 294 ~did~~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~-------------------~~~Gn~~sasi~~~L~~~~~ 350 (401)
+|||.+=+|-.-..+--...+.||+-+.--. +..+ --+||.+.++=...+.++.+
T Consensus 282 ~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~~--~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~ 355 (392)
T PRK06065 282 KEIDVAEPYDPFDYKELHHLEGLQLAKRGEA--PKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYW 355 (392)
T ss_pred hhCcEEEecCCChHHHHHHHHHcCCCCCCcH--HHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHH
Confidence 8999999999865555566788887543110 1222 22799887777777776554
No 216
>PRK07937 lipid-transfer protein; Provisional
Probab=68.56 E-value=21 Score=35.10 Aligned_cols=77 Identities=14% Similarity=0.128 Sum_probs=42.0
Q ss_pred HHHHHHHHh-CCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeec-------ccchhHHHHHHHHHHHHH
Q 044359 84 TIVKDLLSK-HKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSG-------MGCSAGILSISLVKDLLK 155 (401)
Q Consensus 84 ~Aa~~aL~~-ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~-------~gC~~~~~aL~~A~~~i~ 155 (401)
.++++++++ +|++++|||.+=+-- ..+.......+.||+..+ ..++.++ .||+ ++.-+.-+...|+
T Consensus 250 ~~~~~a~~~aAgi~~~diD~~Ei~D----~F~~~~l~~~e~lGl~g~-~pvN~~GG~l~ghp~gat-G~~~~~e~~~QL~ 323 (352)
T PRK07937 250 PSTALAAEAATGGDAGGVDVAELHA----PFTHQELILREALGLGDK-TKVNPSGGALAANPMFAA-GLERIGEAARHIW 323 (352)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEeC----CChHHHHHHHHHcCCCCC-CCcCCCccchhcCchhHH-HHHHHHHHHHHHh
Confidence 444556666 599999999884331 133344556788998532 3444443 1332 3333333444444
Q ss_pred cCCCCeEEEEe
Q 044359 156 VHKNSLALVLS 166 (401)
Q Consensus 156 ~g~~~~vLvv~ 166 (401)
....+++|+.+
T Consensus 324 g~~a~~~l~~~ 334 (352)
T PRK07937 324 DGSARRALAHA 334 (352)
T ss_pred ccCCCEEEEec
Confidence 44456666654
No 217
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=67.73 E-value=12 Score=36.67 Aligned_cols=47 Identities=19% Similarity=0.126 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEE-eeecCCCCCcHHHHHHHHcCC
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVT-NCSIFCPTPSISSMIINKFGF 126 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~l~~~LGl 126 (401)
.-..+|.++||+++|++++|||.|-. ++.+..--+.-...|.+-+|-
T Consensus 206 ~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 206 DGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 45568999999999999999998764 343322233445566776764
No 218
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=66.97 E-value=9.9 Score=38.05 Aligned_cols=45 Identities=24% Similarity=0.242 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEE-eeecCCCCCcHHHHHHHHcCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVT-NCSIFCPTPSISSMIINKFGF 126 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~l~~~LGl 126 (401)
..+|+++||+++|++++|||.+-. ++.+....+.-...+...+|.
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~ 323 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGE 323 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcc
Confidence 357999999999999999999864 343322223333445666663
No 219
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=66.85 E-value=24 Score=35.29 Aligned_cols=43 Identities=12% Similarity=0.140 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRS 128 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~ 128 (401)
...|+++|++++|++++|||.+-+.- .+....-...+.||+.+
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~D----~fa~~~l~~le~lGl~~ 320 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVHD----CFTPSEYLAIDHIGLTG 320 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeeec----cchHHHHHHHHHcCCCC
Confidence 45799999999999999999875432 12334455667888763
No 220
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=65.94 E-value=11 Score=37.53 Aligned_cols=78 Identities=17% Similarity=0.142 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCC-CCcceEEe----ecccchhHHHHHHHHHHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFR-SNIKSINL----SGMGCSAGILSISLVKDL 153 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~-~~~~~~~i----~~~gC~~~~~aL~~A~~~ 153 (401)
.-..++++++|+++|++++|||.+... +.+...-+.-...+.+.+|-. +.++.... ....+++++..|-.+...
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~ 354 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLA 354 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHH
Confidence 344578999999999999999998754 333222233344455555541 11222211 124566677777777777
Q ss_pred HHcC
Q 044359 154 LKVH 157 (401)
Q Consensus 154 i~~g 157 (401)
++.+
T Consensus 355 l~~~ 358 (406)
T cd00834 355 LRDG 358 (406)
T ss_pred HhcC
Confidence 7766
No 221
>PRK14878 UGMP family protein; Provisional
Probab=64.66 E-value=14 Score=35.77 Aligned_cols=51 Identities=12% Similarity=0.116 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC-----cHHHHHHHHcCCCCCcceEEee
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP-----SISSMIINKFGFRSNIKSINLS 136 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p-----~~a~~l~~~LGl~~~~~~~~i~ 136 (401)
-..+.+++|+++|++++|||.|.++..|+.... +.|..++..++. +.+.++
T Consensus 48 l~~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~----p~~~v~ 103 (323)
T PRK14878 48 APELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK----PLVPVN 103 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC----Cccccc
Confidence 348899999999999999999998877764321 124555555554 444444
No 222
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=64.62 E-value=12 Score=37.22 Aligned_cols=46 Identities=15% Similarity=0.214 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcC
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFG 125 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LG 125 (401)
.-..++.++||+++|++++|||.|... +.+...-+.-...+.+-+|
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~ 320 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAG 320 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHh
Confidence 445689999999999999999998743 4332222333344444444
No 223
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=64.33 E-value=11 Score=37.41 Aligned_cols=45 Identities=20% Similarity=0.245 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGF 126 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl 126 (401)
..+++++||+++|++++|||.+... +.+..--+.-...+.+.+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 4589999999999999999998643 43322223334456666664
No 224
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=63.89 E-value=16 Score=38.18 Aligned_cols=45 Identities=9% Similarity=0.158 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEE-eeecCCCCCcHHHHHHHHcCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVT-NCSIFCPTPSISSMIINKFGF 126 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~l~~~LGl 126 (401)
..++.++||+++|++|+|||.|-. +|.+..--+.-...|.+-+|-
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCC
Confidence 458999999999999999999864 343321122234456666663
No 225
>PLN03171 chalcone synthase-like protein; Provisional
Probab=63.64 E-value=25 Score=35.24 Aligned_cols=86 Identities=8% Similarity=0.130 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHh---------CCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcce-----E-Eeecccch
Q 044359 77 ETEEVLCTIVKDLLSK---------HKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKS-----I-NLSGMGCS 141 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~---------ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~-----~-~i~~~gC~ 141 (401)
..+.+..++++++|++ +|++++||+.+++-. .+.+-..+.++||++++... + +..|+.++
T Consensus 276 ~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~Hq~-----~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssa 350 (399)
T PLN03171 276 QVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAVHPG-----SSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGA 350 (399)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEEcCC-----cHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhh
Confidence 4456666666776665 588899998775222 22455678999999754332 2 33445556
Q ss_pred hHHHHHHHHHHHHHc--CCC---CeEEEEee
Q 044359 142 AGILSISLVKDLLKV--HKN---SLALVLSM 167 (401)
Q Consensus 142 ~~~~aL~~A~~~i~~--g~~---~~vLvv~~ 167 (401)
+-..+|..+..-.+. .++ +++|+++.
T Consensus 351 Sip~~L~~~~~~~~~~~~~G~~~d~vll~~f 381 (399)
T PLN03171 351 TVIFALDELRRQMEEAAAAGAWPELGVMMAF 381 (399)
T ss_pred hHHHHHHHHHhhHhhcCCCCCCcceEEEEEE
Confidence 666667655432221 122 67777763
No 226
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=63.48 E-value=23 Score=28.85 Aligned_cols=53 Identities=9% Similarity=0.197 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecC--CCCCcHHHHHHHHcCCCCCcceEEeec
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIF--CPTPSISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
..+-..+.+++.+++++||-.++|+.++| ..+|. ..++++|.-.+++.++...
T Consensus 22 t~eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~~~~~Vplmc~qE 76 (117)
T cd02185 22 TRELLEEIIERNNIKPEDIISVIFTVTPDLDAAFPA---KAARELGGWKYVPLMCAQE 76 (117)
T ss_pred HHHHHHHHHHHcCCCHHHEEEEEEEeCCcccccChH---HHHHhcCCCCCcceeecCc
Confidence 33445667788999999999999987775 33564 5666775444788777765
No 227
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=63.30 E-value=22 Score=28.96 Aligned_cols=52 Identities=8% Similarity=0.306 Sum_probs=38.4
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecC--CCCCcHHHHHHHHc-CCCCCcceEEeecc
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIF--CPTPSISSMIINKF-GFRSNIKSINLSGM 138 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~l~~~L-Gl~~~~~~~~i~~~ 138 (401)
.+-..+.+++.+++++||-.++|+.++| ..+|. ..++++ |+. +++.++...+
T Consensus 23 ~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~Gw~-~Vplmc~qEm 77 (117)
T TIGR01796 23 AELLTELMERNELTPEDLISVIFTVTEDLHADFPA---AAARGLPGWT-DVPVMCAQEI 77 (117)
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEecCcccccChH---HHHHhccCCC-CcceeccCcC
Confidence 3445667788999999999999987765 33564 556677 997 7888877753
No 228
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=62.72 E-value=5.8 Score=37.44 Aligned_cols=58 Identities=21% Similarity=0.205 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC-cHHHHHHHHcCCCCCcceEEeec
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP-SISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p-~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
+.-....+++|++++++++|||.|.++..|+.+.. -.+...++.|.+..+++.+.++.
T Consensus 31 ~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~~Pli~v~~ 89 (268)
T PF00814_consen 31 ENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALNIPLIGVSH 89 (268)
T ss_dssp HHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT--EEEEEH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhCCCeEeecc
Confidence 44458889999999999999999998887764322 12233344443333467777774
No 229
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=62.31 E-value=17 Score=36.36 Aligned_cols=42 Identities=10% Similarity=0.127 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
...|+++||+++|++++|||.+-+.- .++...-...+.||+.
T Consensus 271 ~~~A~~~al~~Agi~~~DID~~Ei~d----~Fa~~~l~~~e~lgl~ 312 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLDLIEAHD----AFAANACATNEALGLC 312 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhh----hhHHHHHHHHHHhCCC
Confidence 46899999999999999999874321 1222334455677765
No 230
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=61.90 E-value=19 Score=36.09 Aligned_cols=46 Identities=13% Similarity=0.265 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGF 126 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl 126 (401)
-..+|.++||+++|+++++||.|... |.+..--+.-...|.+-+|-
T Consensus 271 ~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~ 317 (399)
T cd00832 271 GLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGP 317 (399)
T ss_pred HHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCC
Confidence 34688999999999999999988754 33322233344556666664
No 231
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=61.68 E-value=23 Score=35.96 Aligned_cols=44 Identities=9% Similarity=0.136 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRS 128 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~ 128 (401)
.+..|++++|+++|++++|||.+=..- .++...-...+.||+.+
T Consensus 310 ~~~~A~~~a~~~AGl~~~DiD~~Ei~d----aFa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 310 TSRAAAQKALSMAGVKPSDLQVAEVHD----CFTIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHHHHHHHHcCCCHHHCcEeeecc----cChHHHHHHHHHcCCCC
Confidence 346899999999999999999884332 12333445667788764
No 232
>PLN03173 chalcone synthase; Provisional
Probab=61.22 E-value=23 Score=35.37 Aligned_cols=49 Identities=8% Similarity=0.088 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNI 130 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~ 130 (401)
+.+.....++++|+++|++.+|||++++.- ..+.+-..++++||++++.
T Consensus 275 ~~~~~~~~i~~~L~~~gl~~~di~~~v~Hq----gg~~Il~~v~~~LgL~~ek 323 (391)
T PLN03173 275 ISKNVEKSLTEAFKPLGISDWNSLFWIAHP----GGPAILDQVEAKLALKPEK 323 (391)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCeEEECC----CcHHHHHHHHHHcCCChHH
Confidence 455566778899999999999999966432 2334556789999997543
No 233
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=61.10 E-value=14 Score=36.73 Aligned_cols=46 Identities=13% Similarity=0.238 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcC
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFG 125 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LG 125 (401)
....+|.++||+++|++|+|||.+-.. +.+..--+.-...|.+-+|
T Consensus 254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 456799999999999999999998743 4332212223344555555
No 234
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=60.70 E-value=12 Score=33.59 Aligned_cols=59 Identities=15% Similarity=0.237 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC-cHHHHHHHHcCCCCCcceEEeec
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP-SISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p-~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
.+.-...++++|++++++++|||.|.++..|+.+.. -.+..+++-|.+..+++.+.++.
T Consensus 34 ~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTGlRig~~~akgla~~~~~p~~~vss 93 (202)
T TIGR03725 34 SEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTGLRIGLATAKGLALALGIPLVGVSS 93 (202)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCCEEecCH
Confidence 455567889999999999999999998877664332 12333333333222455666653
No 235
>PRK07855 lipid-transfer protein; Provisional
Probab=60.44 E-value=43 Score=33.39 Aligned_cols=41 Identities=17% Similarity=0.318 Sum_probs=27.5
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
..|+++|++++|++++|||.+-+-- .++.......+.||+.
T Consensus 269 ~~aa~~a~~~AGi~~~DiDv~El~D----~Ft~~~l~~~E~lG~~ 309 (386)
T PRK07855 269 GLVARQLWAQSGLGPADIDTAILYD----HFTPFVLMQLEELGFC 309 (386)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEecc----CCcHHHHHHHHHcCCC
Confidence 4799999999999999999884321 1222333444556654
No 236
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=60.27 E-value=62 Score=32.27 Aligned_cols=42 Identities=10% Similarity=-0.030 Sum_probs=28.6
Q ss_pred HHHHHHHHHhCCCC--cCCcCEEEEeeecCCCCCcHHHHHHHHcCCCC
Q 044359 83 CTIVKDLLSKHKIN--PKSIDILVTNCSIFCPTPSISSMIINKFGFRS 128 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~--~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~ 128 (401)
..|+++|++++|++ ++|||.+-+.- ......-...+.||+.+
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D----~Ft~~~l~~~e~lG~~~ 302 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDD----RYSYKELQHIEALRLSE 302 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEec----CChHHHHHHHHHcCCCC
Confidence 37999999999997 69999885431 12223345566777653
No 237
>PLN03170 chalcone synthase; Provisional
Probab=59.63 E-value=30 Score=34.69 Aligned_cols=71 Identities=10% Similarity=0.134 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcce-----E-EeecccchhHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKS-----I-NLSGMGCSAGILSISLV 150 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~-----~-~i~~~gC~~~~~aL~~A 150 (401)
.+.+.....++++|+++|++.+|||..++.- ..+.+-..+.++||++++... + +..|++.++-..+|+..
T Consensus 278 ~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hq----gg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~ 353 (401)
T PLN03170 278 LISKNIERSLEEAFKPLGITDYNSIFWVAHP----GGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEM 353 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEecC----CcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 3455666788899999999999999876432 133455678999999754422 2 23334555555566554
Q ss_pred H
Q 044359 151 K 151 (401)
Q Consensus 151 ~ 151 (401)
.
T Consensus 354 ~ 354 (401)
T PLN03170 354 R 354 (401)
T ss_pred H
Confidence 3
No 238
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=59.48 E-value=18 Score=35.93 Aligned_cols=49 Identities=16% Similarity=0.213 Sum_probs=32.9
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeec
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
..|+++|++++|++++|||.+-.. + .+....-...+.||+.+ ..++.++
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~---d-~Fa~~~~~~~e~lG~~~--~pvN~~G 331 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEIN---E-AFAPVVLAWLKETGADP--AKVNPNG 331 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeec---c-cchHHHHHHHHHhCCCc--hhcCCCc
Confidence 579999999999999999988322 1 12223345577889863 3455443
No 239
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=59.04 E-value=28 Score=34.38 Aligned_cols=53 Identities=17% Similarity=0.295 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC--------cHHHHHHHHcCCC
Q 044359 75 REETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP--------SISSMIINKFGFR 127 (401)
Q Consensus 75 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p--------~~a~~l~~~LGl~ 127 (401)
......+-.+|++++++++++++++||.|-+...+-+..| +.+..|++++|++
T Consensus 66 ~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~ 126 (365)
T PRK09585 66 DTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGIT 126 (365)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcC
Confidence 3445678889999999999999999998876543322223 2468899999985
No 240
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=58.72 E-value=12 Score=36.03 Aligned_cols=82 Identities=16% Similarity=0.080 Sum_probs=54.6
Q ss_pred cCCCcchhhhcceEeecCCChHHHHHHHHHcCCCchhhhhhHHHH--hhhcC---cccchHHHHHHHHHHcCCCCCCCeE
Q 044359 286 KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTL--YRFGN---TSSSSYWYELCYLEAKGKVKKGDRV 360 (401)
Q Consensus 286 ~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~--~~~Gn---~~sasi~~~L~~~~~~g~l~~Gd~v 360 (401)
+|+. .+|||+|=++-+=.-..-+..+.||++++++.. +- =-.|| |+.|.+...|.+.+++ +.|++.
T Consensus 307 aG~~---~sdVd~~EiNEAFs~v~lA~iK~LgldP~kVNv---~GGAValGHPlG~SGaRi~~tL~~~L~~---~~g~~G 377 (396)
T KOG1390|consen 307 AGLE---QSDVDYWEINEAFSVVVLANIKKLGLDPSKVNV---HGGAVALGHPLGMSGARILVTLLHTLEQ---KGGKIG 377 (396)
T ss_pred cCcc---hhhhhHHhhhhhhhHHHHHHHHHhCCCHhhccC---CCceeecCCCcCCcchhHHHHHHHHHHh---hCCcee
Confidence 3665 789999988776555556778999999999841 21 22465 6778899999998875 234443
Q ss_pred -EEEeeccchhhcceeee
Q 044359 361 -WQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 361 -ll~~~G~G~s~~~~~l~ 377 (401)
.-+.-|.|... +++++
T Consensus 378 vAaiCnGGGgas-a~vie 394 (396)
T KOG1390|consen 378 VAAICNGGGGAS-AMVIE 394 (396)
T ss_pred EEEEecCCCcee-eEEEe
Confidence 34555665543 45554
No 241
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=58.50 E-value=20 Score=35.74 Aligned_cols=73 Identities=12% Similarity=0.093 Sum_probs=41.5
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCCCCcceEEe----ecccchhHHHHHHHHHHHHHcC
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFRSNIKSINL----SGMGCSAGILSISLVKDLLKVH 157 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~~~~~~~~i----~~~gC~~~~~aL~~A~~~i~~g 157 (401)
.++.++||+++|++++|||.+... +.+..--+.-...|.+.+|- +.+...+ ....+++++..+-.+...++.+
T Consensus 263 ~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~--~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 263 ILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGD--GVPCSSTKGLTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCC--CCceeCCCcccccChhhcchHHHHHHHHHHhcC
Confidence 589999999999999999998643 32221123333445555553 2222222 1134445555555555555554
No 242
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=58.10 E-value=18 Score=35.06 Aligned_cols=51 Identities=10% Similarity=0.077 Sum_probs=33.9
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC-----cHHHHHHHHcCCCCCcceEEeec
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTP-----SISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p-----~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
...++++|+++|++++|||.|.++..|+.... +.+..++..++. +.+.|+.
T Consensus 50 ~~~i~~~l~~~~~~~~did~Iavt~gPg~~~~l~vg~~~ak~la~~~~~----p~~~v~h 105 (322)
T TIGR03722 50 PKLIKEALEEAGVSLEDIDAVAFSQGPGLGPCLRVGATAARALALKLNK----PLVGVNH 105 (322)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecCCchHHhHHHHHHHHHHHHHHhCC----Ceechhh
Confidence 45599999999999999999998876653211 124445555553 4555553
No 243
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=57.11 E-value=31 Score=34.70 Aligned_cols=47 Identities=17% Similarity=0.092 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHh-CCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCC
Q 044359 80 EVLCTIVKDLLSK-HKINPKSIDILVTN-CSIFCPTPSISSMIINKFGF 126 (401)
Q Consensus 80 ~la~~Aa~~aL~~-ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl 126 (401)
.-..+|+++||++ +|++++|||.|-.. +.+..--+.-...+.+-+|-
T Consensus 283 ~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~ 331 (421)
T PTZ00050 283 RGARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhcc
Confidence 3456899999999 99999999998643 43322122223345555653
No 244
>PRK13410 molecular chaperone DnaK; Provisional
Probab=56.20 E-value=38 Score=36.49 Aligned_cols=67 Identities=19% Similarity=0.137 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISL 149 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~ 149 (401)
-.+-..+.++++|+++|+++++||.|+.++ ++ .+|.+-..+.+.+|.. +...++-.-|.+...|++.
T Consensus 307 l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGss--RiP~V~~~l~~~fg~~---~~~~~npdeaVA~GAAi~a 374 (668)
T PRK13410 307 LLDRLLRPVKRALKDAGLSPEDIDEVVLVGGST--RMPMVQQLVRTLIPRE---PNQNVNPDEVVAVGAAIQA 374 (668)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCcEEEEECCcc--ccHHHHHHHHHHcCCC---cccCCCCchHHHHhHHHHH
Confidence 344556678999999999999999999775 32 3788888888888854 2333443345554455543
No 245
>PF12633 Adenyl_cycl_N: Adenylate cyclase NT domain; InterPro: IPR024685 Adenylate cyclase is the enzyme responsible for the synthesis of cAMP from ATP. On the basis of sequence similarity, it has been proposed that there are three different classes of adenylate cyclases [, ]. Class I cyclases are found in enterobacteria and related Gram-negative bacteria. This entry represents the N-terminal domain of class-I adenylate cyclases.
Probab=55.85 E-value=10 Score=34.06 Aligned_cols=58 Identities=9% Similarity=0.009 Sum_probs=40.9
Q ss_pred hhhhcceEeecCCCh------------HHHHHHHHHcCC-------CchhhhhhHHHHh----hhcCcccchHHHHHHHH
Q 044359 292 FKKAFEHFCIHAGGR------------AIIDAVEENLKL-------SKEDGEASRMTLY----RFGNTSSSSYWYELCYL 348 (401)
Q Consensus 292 ~~~did~~i~Hq~~~------------~~~~~~~~~lgi-------~~e~~~~s~~~~~----~~Gn~~sasi~~~L~~~ 348 (401)
..+|+|.|++|+... ..++.+++.+|+ +++++. .+-. .--|+|||--.+.|++.
T Consensus 113 ~~SDlDiWvCh~~~L~~~~~~~Lq~K~~~i~~WA~~~gvEv~FfLmd~~~fr---~~~~~~~~~~E~~GSaQh~LLLdEF 189 (204)
T PF12633_consen 113 SSSDLDIWVCHDSDLSPEERQLLQQKCDLIEQWAASFGVEVHFFLMDEERFR---HNRSGSPLTGESCGSAQHLLLLDEF 189 (204)
T ss_pred CCCCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEEEECHHHHh---cCCcccCCCCCCChHHHHHHHHHHH
Confidence 368999999999762 344567788887 445552 2211 12479999999999999
Q ss_pred HHcC
Q 044359 349 EAKG 352 (401)
Q Consensus 349 ~~~g 352 (401)
.++.
T Consensus 190 YRTa 193 (204)
T PF12633_consen 190 YRTA 193 (204)
T ss_pred HHHH
Confidence 8864
No 246
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=55.50 E-value=31 Score=34.78 Aligned_cols=46 Identities=13% Similarity=0.067 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEE-eeecCCCCCcHHHHHHHHcCC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVT-NCSIFCPTPSISSMIINKFGF 126 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~l~~~LGl 126 (401)
-..++.++||+++|++++|||.+-. ++.+..--+.-...|.+-+|-
T Consensus 287 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 3568999999999999999999864 343322233445567777774
No 247
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=54.26 E-value=15 Score=33.69 Aligned_cols=81 Identities=10% Similarity=0.017 Sum_probs=43.8
Q ss_pred HHHHhhhcc--CCCcchhhhcceEeecC----CChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHc
Q 044359 278 WSVVCKKSK--TYVPNFKKAFEHFCIHA----GGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAK 351 (401)
Q Consensus 278 ~~~~~~~l~--~l~~~~~~did~~i~Hq----~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~ 351 (401)
.+...++|+ |+. ++||+++|+-. ..+.+--.+.+.||++++--. ..+ +-||++.=...|..+.+-
T Consensus 105 ~~Aa~~AL~~~g~~---~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R---~~i---~~~GC~gg~~~L~~A~~~ 175 (226)
T PF00195_consen 105 EEAARKALAEAGLD---PSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQR---TPI---FGMGCAGGAAGLRRAKDI 175 (226)
T ss_dssp HHHHHHHHHHHTS----GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEE---EEE---ES-GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCC---CcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEE---EEE---eccchhhHHHHHHHHHHH
Confidence 344445552 554 79999999743 345555689999999866431 223 444444444444433221
Q ss_pred CCCCCCCeEEEEeecc
Q 044359 352 GKVKKGDRVWQIAFGS 367 (401)
Q Consensus 352 g~l~~Gd~vll~~~G~ 367 (401)
-+-.||.+||+++.-.
T Consensus 176 ~~~~p~a~VLvv~vEl 191 (226)
T PF00195_consen 176 ARANPGARVLVVCVEL 191 (226)
T ss_dssp HHHSTT-EEEEEEEEE
T ss_pred HhCCccceEEEEEEEe
Confidence 1225899999987653
No 248
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=54.23 E-value=22 Score=35.67 Aligned_cols=45 Identities=18% Similarity=0.086 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEE-eeecCCCCCcHHHHHHHHcC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVT-NCSIFCPTPSISSMIINKFG 125 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~l~~~LG 125 (401)
-..+|+++||+++|++|+|||.|-. ++.+..--+.-...+.+.+|
T Consensus 289 ~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 289 GARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 4568999999999999999999864 34332212233445666666
No 249
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=53.84 E-value=22 Score=34.64 Aligned_cols=53 Identities=15% Similarity=0.180 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC-----cHHHHHHHHcCCCCCcceEEeec
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP-----SISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p-----~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
--.++.+++|+++++.|.|+|+|.+...|+...+ +.|..++.++.. +.+.|..
T Consensus 85 ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~k----PlipVHH 142 (405)
T KOG2707|consen 85 NIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQK----PLIPVHH 142 (405)
T ss_pred HHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccC----CccchhH
Confidence 3457889999999999999999987766764433 345566666654 4455553
No 250
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=53.52 E-value=20 Score=36.24 Aligned_cols=44 Identities=16% Similarity=0.156 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFG 125 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LG 125 (401)
..++.+++|+++|++++|||.+... +.+....+.-..-|.+.+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 4588999999999999999999854 3332222223334455555
No 251
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=52.75 E-value=12 Score=33.82 Aligned_cols=38 Identities=26% Similarity=0.289 Sum_probs=26.7
Q ss_pred ccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcce
Q 044359 337 SSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSA 374 (401)
Q Consensus 337 ~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~ 374 (401)
.+-|.|.....+++.=.++||++||=+|.|+|+..+.+
T Consensus 53 ~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAll 90 (209)
T PF01135_consen 53 QTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAALL 90 (209)
T ss_dssp EEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHHH
T ss_pred eechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHH
Confidence 55677777888887767999999999999999886543
No 252
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=52.59 E-value=28 Score=36.27 Aligned_cols=54 Identities=15% Similarity=0.289 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCc------HHHHHHHHcCCCCCcceEEeec
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPS------ISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~------~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
...+. .+++++|+++|++++|||.|.++..|+. .++ .|.-++..+| ++.+.|+.
T Consensus 49 ~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~-~~~l~vg~~~ak~la~~~~----~~~~~v~h 108 (535)
T PRK09605 49 AEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGL-GPCLRVVATAARALALSLD----VPLIGVNH 108 (535)
T ss_pred HHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCc-HhhHHHHHHHHHHHHHHhC----CCeecccH
Confidence 34444 8899999999999999999988776653 222 2344455555 44555553
No 253
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=52.31 E-value=30 Score=34.74 Aligned_cols=45 Identities=13% Similarity=0.110 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEE-eeecCCCCCcHHHHHHHHcC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVT-NCSIFCPTPSISSMIINKFG 125 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~l~~~LG 125 (401)
-..++.+++|++++++++|||.+.. +|.+..--+.-...|.+-+|
T Consensus 276 ~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 276 TMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 3458999999999999999999874 44332223344556777776
No 254
>PLN03172 chalcone synthase family protein; Provisional
Probab=51.81 E-value=48 Score=33.12 Aligned_cols=69 Identities=9% Similarity=0.119 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcce-----E-EeecccchhHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKS-----I-NLSGMGCSAGILSISLV 150 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~-----~-~i~~~gC~~~~~aL~~A 150 (401)
+.......++++|++.|++..|||.+++.- ..+.+-..++++||++++... + +..|+..++-..+|+..
T Consensus 275 ~~~~i~~~~~~~L~~~gl~~~di~~~~~Hq----gg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 275 ISKNIEKSLVEAFAPIGINDWNSIFWIAHP----GGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHHHHHHhhhcCCCccccceEEecC----CcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 444555677788999999999999866432 234455679999999754332 2 22334445555556544
No 255
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=51.55 E-value=39 Score=33.84 Aligned_cols=47 Identities=13% Similarity=0.295 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCC
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGF 126 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl 126 (401)
.....++++||+++|++++|||.+... +.+...-..-...+..-+|.
T Consensus 279 ~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 279 PAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 344679999999999999999999754 43221112223445555553
No 256
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=51.49 E-value=39 Score=34.00 Aligned_cols=45 Identities=9% Similarity=-0.008 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEE-eeecCCCCCcHHHHHHHHcC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVT-NCSIFCPTPSISSMIINKFG 125 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~l~~~LG 125 (401)
...+|.+++|+++|++|+|||.+-. ++.+..--+.-..-|.+-+|
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg 324 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALG 324 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhc
Confidence 3568899999999999999998854 34332223334455666666
No 257
>PLN02854 3-ketoacyl-CoA synthase
Probab=50.70 E-value=69 Score=33.31 Aligned_cols=42 Identities=14% Similarity=0.286 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCCc------CCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINP------KSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~------~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
+...+++.|.++|+.+ ++||+++... .....-..+++.||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHq----ggr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHA----GGRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECC----CCHHHHHHHHHHcCCC
Confidence 5667889999999987 6899876543 1233445789999997
No 258
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=48.87 E-value=39 Score=33.06 Aligned_cols=42 Identities=21% Similarity=0.350 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEee-e-cCCCCCc
Q 044359 74 SREETEEVLCTIVKDLLSKHKINPKSIDILVTNC-S-IFCPTPS 115 (401)
Q Consensus 74 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s-~-~~~~~p~ 115 (401)
-+|+..+|......+++++++++.+|+|.|+=+| . -+...|.
T Consensus 61 tresV~elV~dtl~e~~k~A~l~i~DL~FVVRSTGV~Agf~spe 104 (445)
T TIGR03285 61 TRESVAELVKDTLKESLKKAGLDIDDLDFVVRSTGVTAGFASPE 104 (445)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCChhhccEEEeccceeeccCCHH
Confidence 3677889999999999999999999999998665 2 3455554
No 259
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=48.03 E-value=1e+02 Score=32.64 Aligned_cols=48 Identities=17% Similarity=0.184 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCC
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~ 127 (401)
..+=..+.++++|+++++++++||.|+.++ ++ .+|.+-..+.+.+|..
T Consensus 291 ll~~i~~~i~~~L~~a~~~~~~id~ViLvGGss--riP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 291 LVQKTLSICRRALRDAGLSVEEIKGVVLVGGST--RMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCCEEEEECCcC--CChHHHHHHHHHhCCC
Confidence 334456778999999999999999999765 32 4788888899998864
No 260
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=46.97 E-value=1e+02 Score=32.83 Aligned_cols=65 Identities=12% Similarity=0.054 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHH
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSIS 148 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~ 148 (401)
.+=..+.++++|+++++.+++||.|+.++ ++ .+|.+...|.+.+|..+ ...++-.-|.+...|++
T Consensus 308 ~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGss--riP~v~~~l~~~fg~~~---~~~~npdeaVA~GAAi~ 373 (616)
T PRK05183 308 VKRTLLACRRALRDAGVEADEVKEVVMVGGST--RVPLVREAVGEFFGRTP---LTSIDPDKVVAIGAAIQ 373 (616)
T ss_pred HHHHHHHHHHHHHHcCCCcccCCEEEEECCcc--cChHHHHHHHHHhccCc---CcCCCchHHHHHHHHHH
Confidence 34455667899999999999999999875 33 47888888999888642 22344334444444443
No 261
>PLN03184 chloroplast Hsp70; Provisional
Probab=46.86 E-value=63 Score=34.81 Aligned_cols=65 Identities=17% Similarity=0.142 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHH
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSIS 148 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~ 148 (401)
.+-..+.++++|+++++++++||.|+.+. ++ .+|.+-..|.+.+|.. +...++..-|.+.-.|++
T Consensus 345 ~~r~~~~i~~~L~~a~~~~~dId~ViLvGGss--riP~V~~~i~~~fg~~---~~~~~npdeaVA~GAAi~ 410 (673)
T PLN03184 345 LDRCKTPVENALRDAKLSFKDIDEVILVGGST--RIPAVQELVKKLTGKD---PNVTVNPDEVVALGAAVQ 410 (673)
T ss_pred HHHHHHHHHHHHHHcCCChhHccEEEEECCcc--ccHHHHHHHHHHhCCC---cccccCcchHHHHHHHHH
Confidence 44556678899999999999999999775 33 3788888899999864 233444334444444444
No 262
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=46.31 E-value=24 Score=34.49 Aligned_cols=48 Identities=17% Similarity=0.153 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEE-EeeecCCCCCcHHHHHHHHcCCC
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILV-TNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li-~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
.=+..|.++||+++|+.|+|||.|= ++|++..---.-+..|.+-++-.
T Consensus 301 ~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~~ 349 (440)
T KOG1394|consen 301 AGAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGEH 349 (440)
T ss_pred chHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhccC
Confidence 4567889999999999999999995 56654221112334466666543
No 263
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=46.16 E-value=80 Score=33.94 Aligned_cols=64 Identities=13% Similarity=-0.017 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSIS 148 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~ 148 (401)
+-....++++|+++++++++||.|+.++ ++ .+|.+-..|.+.+|-.+ ...++-.-|.+...|++
T Consensus 334 ~r~~~~v~~~L~~a~~~~~dId~VvLVGGss--riP~V~~~l~~~fg~~~---~~~~nPdeaVA~GAAi~ 398 (657)
T PTZ00186 334 ERSIAPCKQCMKDAGVELKEINDVVLVGGMT--RMPKVVEEVKKFFQKDP---FRGVNPDEAVALGAATL 398 (657)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEECCcc--cChHHHHHHHHHhCCCc---cccCCCchHHHHhHHHH
Confidence 3345667899999999999999999774 33 47888889999998642 23344334544444444
No 264
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=45.83 E-value=30 Score=34.52 Aligned_cols=43 Identities=12% Similarity=0.066 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
....|+++|++++|++++|||.+-+-. .++.......+.||+.
T Consensus 256 ~~~~aa~~a~~~AGi~~~did~~elyD----~Fs~~~~~~~E~lGl~ 298 (388)
T PRK08142 256 GAAWSGPAAFAEAGVTPADIKYASIYD----SFTITVLMQLEDLGFC 298 (388)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEec----cchHHHHHHHHHcCCC
Confidence 346799999999999999999764321 1222334455677763
No 265
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=45.65 E-value=43 Score=33.91 Aligned_cols=26 Identities=12% Similarity=0.247 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEe
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTN 106 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~ 106 (401)
-..+|+++||+++|++++|||.|-..
T Consensus 300 ~~~~a~~~Al~~Agi~~~dId~ve~h 325 (437)
T PLN02836 300 GAVLAMTRALQQSGLHPNQVDYVNAH 325 (437)
T ss_pred HHHHHHHHHHHHcCCCHhHcCEEEcc
Confidence 34678999999999999999998643
No 266
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=45.31 E-value=47 Score=33.08 Aligned_cols=27 Identities=15% Similarity=0.438 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN 106 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~ 106 (401)
.-..+++++||+++|++++|||.+...
T Consensus 279 ~~~~~a~~~al~~Agi~~~did~i~~h 305 (421)
T cd00833 279 EAQAALIRRAYARAGVDPSDIDYVEAH 305 (421)
T ss_pred HHHHHHHHHHHHHhCCCHHHCcEEEee
Confidence 445689999999999999999999754
No 267
>CHL00094 dnaK heat shock protein 70
Probab=44.78 E-value=69 Score=34.11 Aligned_cols=48 Identities=19% Similarity=0.230 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
.+-....++++|+++++++++||.|+.++.. ...|.+-..+.+.+|..
T Consensus 308 ~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 308 INRCRIPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 3444566789999999999999999977522 14788888899999854
No 268
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=43.21 E-value=82 Score=33.59 Aligned_cols=67 Identities=15% Similarity=0.099 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSIS 148 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~ 148 (401)
..+-..+.++++|+++++++++||.|+.++..- .+|.+-..|.+.+|... ...++-.-|.+...|+.
T Consensus 305 l~~~~~~~i~~~l~~a~~~~~~id~ViLvGGss-riP~v~~~l~~~fg~~~---~~~~npdeava~GAa~~ 371 (627)
T PRK00290 305 LVERTIEPCKQALKDAGLSVSDIDEVILVGGST-RMPAVQELVKEFFGKEP---NKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCcEEEEECCcC-CChHHHHHHHHHhCCCC---CcCcCChHHHHHhHHHH
Confidence 344456678899999999999999999775221 37888888999888542 23333335555445554
No 269
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=43.01 E-value=41 Score=32.98 Aligned_cols=56 Identities=13% Similarity=0.225 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCc--HHHHHHHHcCCCCCcceEEeec
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPS--ISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~--~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
.-...++++|+++|++++|||.|.++..|+. .++ .....++.|.+..+++.+.++.
T Consensus 52 ~l~~~i~~~l~~a~~~~~did~Iavt~GPGl-~~~LrVG~~~Ak~LA~a~~~PligV~H 109 (345)
T PTZ00340 52 HILSLVKEALEEAKITPSDISLICYTKGPGM-GAPLSVGAVVARTLSLLWGKPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecCCCc-HhhHHHHHHHHHHHHHHcCCCEeecch
Confidence 3457789999999999999999988776663 222 2233444444333566777774
No 270
>PF12244 DUF3606: Protein of unknown function (DUF3606); InterPro: IPR022037 This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=42.07 E-value=22 Score=25.02 Aligned_cols=29 Identities=14% Similarity=0.182 Sum_probs=24.8
Q ss_pred HHHHHHHHHcCCCchhhhhhHHHHhhhcCccc
Q 044359 307 AIIDAVEENLKLSKEDGEASRMTLYRFGNTSS 338 (401)
Q Consensus 307 ~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~s 338 (401)
.=+..+++.||++++++ ..-+.+.||...
T Consensus 21 ~ev~ywa~~~gvt~~~L---~~AV~~vG~~~~ 49 (57)
T PF12244_consen 21 YEVRYWAKRFGVTEEQL---REAVRAVGNSRA 49 (57)
T ss_pred HHHHHHHHHHCcCHHHH---HHHHHHHCcCHH
Confidence 55688999999999999 588999999843
No 271
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=41.85 E-value=52 Score=32.98 Aligned_cols=24 Identities=17% Similarity=0.450 Sum_probs=21.2
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTN 106 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~ 106 (401)
.+++++||+++|++++|||.+...
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~h 307 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPH 307 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEcc
Confidence 589999999999999999988643
No 272
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=41.33 E-value=1.4e+02 Score=28.65 Aligned_cols=113 Identities=12% Similarity=0.084 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCC-cCEEEEe-eecCCC--CCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKS-IDILVTN-CSIFCP--TPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDL 153 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~d-Id~li~~-s~~~~~--~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~ 153 (401)
+.+=..++.++|++++|++++. +..|... |..++. ..-+-..+-++.+ ..+.-|-|.+ +....+
T Consensus 45 ~~~rie~~i~~A~~k~g~d~~~~lr~lgL~lSg~d~e~~~~~lv~~~R~~fp--s~ae~~~v~s----------Da~~sl 112 (336)
T KOG1794|consen 45 CASRIEDMIREAKEKAGWDKKGPLRSLGLGLSGTDQEDKNRKLVTEFRDKFP--SVAENFYVTS----------DADGSL 112 (336)
T ss_pred HHHHHHHHHHHHHhhcCCCccCccceeeeecccCCchhHHHHHHHHHHHhcc--chhheeeeeh----------hHHHHH
Confidence 4555567889999999999998 7777655 322221 1122333444433 2345455554 111222
Q ss_pred HHc---CCCCeEEEEeeccccCCCCCC-CCcchhhhhhcccccceEEEEecCC
Q 044359 154 LKV---HKNSLALVLSMEAISSNGYTG-STKSMLISNTVFRMGGAAILLSNRQ 202 (401)
Q Consensus 154 i~~---g~~~~vLvv~~e~~s~~~~~~-~d~~~~i~~~lfGDGAaA~ll~~~~ 202 (401)
..+ +....||+-+.....+.++++ +...--....+.|||++|..+.+..
T Consensus 113 ~a~t~g~~~GiVLiaGTgs~crl~~~DGs~~~~ggwg~~iGd~GSaywia~~A 165 (336)
T KOG1794|consen 113 AAATPGGEGGIVLIAGTGSNCRLVNPDGSEKGAGGWGHMIGDGGSAYWIARQA 165 (336)
T ss_pred hhcCCCCCCcEEEEecCCceeEEECCCCCccCCCCCCCccCCCcchhhhhhhh
Confidence 222 336788888888877777763 1111001246789999999988755
No 273
>PRK13411 molecular chaperone DnaK; Provisional
Probab=41.13 E-value=79 Score=33.93 Aligned_cols=46 Identities=22% Similarity=0.294 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCC
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGF 126 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl 126 (401)
.+-..+.++++|+++++.+++||.|+.++ ++ .+|.+-..|.+.+|-
T Consensus 307 ~~~~~~~i~~~L~~a~~~~~~id~ViLvGGss--riP~v~~~l~~~f~~ 353 (653)
T PRK13411 307 VEATIEPMQQALKDAGLKPEDIDRVILVGGST--RIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCcEEEEECCCC--CcchHHHHHHHHcCC
Confidence 34456678999999999999999999775 33 478888889988874
No 274
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=40.32 E-value=90 Score=31.60 Aligned_cols=43 Identities=12% Similarity=0.080 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhCCCC--cCCcCEEEEeeecCCCCCcHHHHHHHHcCCCC
Q 044359 82 LCTIVKDLLSKHKIN--PKSIDILVTNCSIFCPTPSISSMIINKFGFRS 128 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~--~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~ 128 (401)
...|+++|++++|++ ++|||.+-..- ..+...-...+.||+.+
T Consensus 295 ~~~a~~~a~~~AGl~~~~~DiD~~Ei~D----~Fa~~~l~~lE~lGl~~ 339 (430)
T PRK06365 295 GRMAAKEAYEMAGITDPLNDLDLIELHD----AYTSSEIQTYEDLGLCK 339 (430)
T ss_pred HHHHHHHHHHHcCCCCCHHHCCEEEeec----CCcHHHHHHHHHcCCCC
Confidence 358999999999997 79999884331 12223345567777753
No 275
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=39.59 E-value=86 Score=33.15 Aligned_cols=67 Identities=15% Similarity=0.119 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSIS 148 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~ 148 (401)
..+-....++++|+++++.+++||.|+.++..- ..|.+-..|.+.+|.. ....++-.-|.+...|+.
T Consensus 303 l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGss-riP~v~~~i~~~f~~~---~~~~~~pdeava~GAa~~ 369 (595)
T TIGR02350 303 LVERTKEPVRQALKDAGLSASDIDEVILVGGST-RIPAVQELVKDFFGKE---PNKSVNPDEVVAIGAAIQ 369 (595)
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCcEEEEECCcc-cChHHHHHHHHHhCCc---ccCCcCcHHHHHHHHHHH
Confidence 344455677899999999999999999775221 3788888899988843 223333234444444554
No 276
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=39.13 E-value=40 Score=27.25 Aligned_cols=55 Identities=16% Similarity=0.107 Sum_probs=31.6
Q ss_pred hhhcceEeecCCChHHHHHH-----HHHcCCCc--hhhhhhHHHHhhhcCcccchHHHHHHHH
Q 044359 293 KKAFEHFCIHAGGRAIIDAV-----EENLKLSK--EDGEASRMTLYRFGNTSSSSYWYELCYL 348 (401)
Q Consensus 293 ~~did~~i~Hq~~~~~~~~~-----~~~lgi~~--e~~~~s~~~~~~~Gn~~sasi~~~L~~~ 348 (401)
++|||++..|-.+....+.. .+.++-.. ..+.. ...-..+||+.+++=.+.|...
T Consensus 42 ~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v-~s~K~~~Gh~~~asG~~~l~~~ 103 (119)
T PF02801_consen 42 PEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPV-GSVKSNIGHTEAASGLLSLAKA 103 (119)
T ss_dssp GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEE-E-THHHH-B-GGGHHHHHHHHH
T ss_pred cccceeeeeeccccccchhhhhhhhhhhhcccccccccce-eccccccccccccchHHHHHHH
Confidence 79999999999998876643 34444322 11221 2456779999999998888764
No 277
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=37.92 E-value=33 Score=32.10 Aligned_cols=29 Identities=14% Similarity=0.298 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEe
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTN 106 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~ 106 (401)
..||..+|++++.+++|+.|+||+.|-..
T Consensus 270 gfdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 270 GFDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred cchHHHHHHHHHHHHcCCCcccceEEEee
Confidence 35899999999999999999999988543
No 278
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=37.84 E-value=1e+02 Score=33.03 Aligned_cols=64 Identities=16% Similarity=0.146 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHH
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISL 149 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~ 149 (401)
....++++|+++++++++||.|+.+. ++ .+|.+-..|.+.+|-.. ....++-.-|.+.-.|++.
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGGss--riP~v~~~i~~~f~~~~--~~~~~npdeaVA~GAa~~a 379 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGGST--RIPKVQSLIKDFFNGKE--PCKSINPDEAVAYGAAVQA 379 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCCC--CChhHHHHHHHHhCCCC--CCCCCCcchHHhhhhhhhH
Confidence 45668999999999999999999775 33 47888888988887431 2233332344444445543
No 279
>PRK00768 nadE NAD synthetase; Reviewed
Probab=37.78 E-value=3.6e+02 Score=25.48 Aligned_cols=32 Identities=6% Similarity=0.092 Sum_probs=21.5
Q ss_pred CcHHHHHHHHcCCCCCcceEEeecccchhHHHHH
Q 044359 114 PSISSMIINKFGFRSNIKSINLSGMGCSAGILSI 147 (401)
Q Consensus 114 p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL 147 (401)
...+..+++.||+. ....++|. ....++...+
T Consensus 89 ~~da~~la~~lgi~-~~~~i~I~-~~~~~~~~~l 120 (268)
T PRK00768 89 EDDAQDALAFIQPD-RVLTVNIK-PAVDASVAAL 120 (268)
T ss_pred HHHHHHHHHhcCCC-eeEEEECH-HHHHHHHHHH
Confidence 35677899999985 36777877 3555554443
No 280
>PLN03168 chalcone synthase; Provisional
Probab=36.70 E-value=97 Score=30.89 Aligned_cols=79 Identities=16% Similarity=-0.004 Sum_probs=46.7
Q ss_pred HHHHHhhhc--cCCCcchhhhcceEeecCCC----hHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHH
Q 044359 277 LWSVVCKKS--KTYVPNFKKAFEHFCIHAGG----RAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEA 350 (401)
Q Consensus 277 ~~~~~~~~l--~~l~~~~~~did~~i~Hq~~----~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~ 350 (401)
+.+...++| .|+. ++|||++|+...+ +..--.+.++||+++.-. . ---.|++++.-..+|..+..
T Consensus 105 a~~Aa~~AL~~ag~~---~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~----r--~~d~~~gC~g~~~aL~~A~~ 175 (389)
T PLN03168 105 AAEAAQKAIKEWGGR---KSDITHIVFATTSGVNMPGADHALAKLLGLKPTVK----R--VMMYQTGCFGGASVLRVAKD 175 (389)
T ss_pred HHHHHHHHHHHcCCC---HHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcce----e--eeeeCCccHHHHHHHHHHHH
Confidence 344444555 3555 7999999886543 334447889999975421 0 11256777777777765533
Q ss_pred cCCCCCCCeEEEEe
Q 044359 351 KGKVKKGDRVWQIA 364 (401)
Q Consensus 351 ~g~l~~Gd~vll~~ 364 (401)
-=+-.++.+||+++
T Consensus 176 ~i~~~~~~~VLVV~ 189 (389)
T PLN03168 176 LAENNKGARVLAVA 189 (389)
T ss_pred HHHhCCCCEEEEEE
Confidence 11113567777655
No 281
>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues. The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=35.90 E-value=91 Score=30.75 Aligned_cols=42 Identities=19% Similarity=0.293 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcC-CcCEEEEee-e-cCCCCCc
Q 044359 74 SREETEEVLCTIVKDLLSKHKINPK-SIDILVTNC-S-IFCPTPS 115 (401)
Q Consensus 74 ~~~~~~~la~~Aa~~aL~~ag~~~~-dId~li~~s-~-~~~~~p~ 115 (401)
-+|+..+|......+++++++++.+ |+|.|+=+| . -+...|.
T Consensus 63 TrEsV~elVrdtl~e~~k~A~l~i~~DL~FVVRSTGVvAgf~spe 107 (448)
T PF09887_consen 63 TRESVAELVRDTLLESHKKAHLDIKKDLDFVVRSTGVVAGFDSPE 107 (448)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCccccceEEEeecceeeccCCHH
Confidence 3677899999999999999999987 999998665 2 3455554
No 282
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=35.25 E-value=83 Score=33.86 Aligned_cols=45 Identities=9% Similarity=0.143 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~ 127 (401)
-....++++|+++++++++||.|+.++ ++ ..|.+-..|.+.+|..
T Consensus 349 ~~~~~i~~~L~~a~~~~~~i~~ViLvGGss--riP~v~~~l~~~f~~~ 394 (663)
T PTZ00400 349 KTIEPCEKCIKDAGVKKDELNDVILVGGMT--RMPKVSETVKKIFGKE 394 (663)
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEEECCcc--CChHHHHHHHHHhCCC
Confidence 345667899999999999999999775 33 4788888899988854
No 283
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=34.03 E-value=32 Score=31.14 Aligned_cols=36 Identities=28% Similarity=0.286 Sum_probs=26.4
Q ss_pred chHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcce
Q 044359 339 SSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSA 374 (401)
Q Consensus 339 asi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~ 374 (401)
-|-|.....+.+.=.+++|++||=+|.|+||..+.+
T Consensus 55 is~P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aAvl 90 (209)
T COG2518 55 ISAPHMVARMLQLLELKPGDRVLEIGTGSGYQAAVL 90 (209)
T ss_pred ecCcHHHHHHHHHhCCCCCCeEEEECCCchHHHHHH
Confidence 334445555555557899999999999999986543
No 284
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=33.34 E-value=69 Score=31.87 Aligned_cols=45 Identities=18% Similarity=0.242 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhCCCC--cCCcCEEEEeeecCCCCCcHHHHHHHHcCCCC
Q 044359 80 EVLCTIVKDLLSKHKIN--PKSIDILVTNCSIFCPTPSISSMIINKFGFRS 128 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~--~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~ 128 (401)
.....|+++|++++|++ ++|||.+=.-. .++.......+.|||.+
T Consensus 255 ~~~~~a~~~a~~~Agi~~p~~Did~~el~d----~F~~~~~~~~e~lGl~~ 301 (386)
T PRK08313 255 QAGRDAAAALWKAAGITDPRDEIDVAEIYV----PFSWFEPMWLENLGFAP 301 (386)
T ss_pred HHHHHHHHHHHHHcCCCCChhhCCEEEecc----CChHHHHHHHHHcCCCC
Confidence 34458999999999997 69999774322 12333345567777753
No 285
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=32.69 E-value=80 Score=31.54 Aligned_cols=43 Identities=5% Similarity=0.067 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCCCC--cCCcCEEEEeeecCCCCCcHHHHHHHHcCCCC
Q 044359 82 LCTIVKDLLSKHKIN--PKSIDILVTNCSIFCPTPSISSMIINKFGFRS 128 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~--~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~ 128 (401)
...|+++|++++|++ ++|||.+=+.- .+....-...+.||+.+
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~D----~Fs~~~l~~~e~lGl~~ 312 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVHD----CFSITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEec----CChHHHHHHHHHcCCCC
Confidence 457999999999998 79999874321 12233445667888764
No 286
>COG3072 CyaA Adenylate cyclase [Nucleotide transport and metabolism]
Probab=30.54 E-value=39 Score=35.47 Aligned_cols=56 Identities=9% Similarity=0.026 Sum_probs=40.3
Q ss_pred hhhcceEeecCCCh------------HHHHHHHHHcCCCchhhhhhHHHHhhh-----------cCcccchHHHHHHHHH
Q 044359 293 KKAFEHFCIHAGGR------------AIIDAVEENLKLSKEDGEASRMTLYRF-----------GNTSSSSYWYELCYLE 349 (401)
Q Consensus 293 ~~did~~i~Hq~~~------------~~~~~~~~~lgi~~e~~~~s~~~~~~~-----------Gn~~sasi~~~L~~~~ 349 (401)
.+|.|-|+||+... ..++.+++.+|+...-+ ...-.+| +|+||+--++.|++..
T Consensus 115 sSDLD~WVCh~~~Ls~~er~~L~rKc~lie~WA~s~gvEvnff---L~D~~RFr~~~~s~~l~gedcGstQh~LLLDEFY 191 (853)
T COG3072 115 SSDLDIWVCHQDWLSTEERQLLQRKCSLLEDWAASQGVEVNFF---LIDENRFRQHNESGSLGGEDCGSTQHILLLDEFY 191 (853)
T ss_pred ccccceEEEecccCChhHHHHHHHHHHHHHHHHHHhCceEEEE---EecHHhhhcccccCCCCCcCCcchhhhHHHHHHH
Confidence 68999999999863 34566788888754322 2223333 5999999999999988
Q ss_pred Hc
Q 044359 350 AK 351 (401)
Q Consensus 350 ~~ 351 (401)
++
T Consensus 192 RS 193 (853)
T COG3072 192 RS 193 (853)
T ss_pred HH
Confidence 75
No 287
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=29.96 E-value=1.7e+02 Score=28.58 Aligned_cols=69 Identities=17% Similarity=0.336 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHhCCC-CcCCcCEEEEeeecCCCCCcHHHHHHHH--cCCCCCcceEE-eecccchhHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKI-NPKSIDILVTNCSIFCPTPSISSMIINK--FGFRSNIKSIN-LSGMGCSAGILSISLVKDL 153 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~-~~~dId~li~~s~~~~~~p~~a~~l~~~--LGl~~~~~~~~-i~~~gC~~~~~aL~~A~~~ 153 (401)
..+...+|+++||.++|| +|.|+-.|-+=| +.+.. ..|... -|-. +..-| ...|+-+-+.+||-+|-.+
T Consensus 130 qV~~vA~aV~~aM~~AGI~dpaDVH~VQvKc----PLLT~-~~i~~A~~RG~~--~~t~dt~~SM~~SrgASALGvAvAL 202 (365)
T PF09663_consen 130 QVEEVAAAVRAAMADAGITDPADVHFVQVKC----PLLTS-ERIADAKARGKT--VATEDTYESMAYSRGASALGVAVAL 202 (365)
T ss_pred HHHHHHHHHHHHHHHcCCCChhheeeEEecC----CcCCH-HHHHHHHhCCCc--eeecccccccccccchhHHHHHHHh
Confidence 467788999999999999 788876554333 23322 233332 2322 22122 2224555566777776664
No 288
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=29.84 E-value=78 Score=31.33 Aligned_cols=51 Identities=24% Similarity=0.383 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-----cCCCCC-----cHHHHHHHHcCCC
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCS-----IFCPTP-----SISSMIINKFGFR 127 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-----~~~~~p-----~~a~~l~~~LGl~ 127 (401)
.-.++..+|+++.|+++++++++||+|=+.+. |....+ +....|++++|++
T Consensus 65 ~lg~~~a~av~~~l~~~~i~~~~I~~IgsHGQTv~H~P~~~~~~TlQiG~~~~iA~~tgi~ 125 (364)
T PF03702_consen 65 ELGELFADAVNQFLKKNGISPSDIDLIGSHGQTVFHRPEGQHPFTLQIGDPAVIAERTGIT 125 (364)
T ss_dssp HHHHHHHHHHHHHHHHCT--GGGEEEEEE--EEEEEECCCTTTEEEEES-HHHHHHHHSS-
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccEEEeCCcceecCcCCCCCceEecCCHHHHHHHHCcC
Confidence 34577889999999999999999999865432 211111 2478899999986
No 289
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=27.39 E-value=1.3e+02 Score=28.65 Aligned_cols=70 Identities=3% Similarity=-0.002 Sum_probs=45.0
Q ss_pred CCCcchhhhcceEeecC----CChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEE
Q 044359 287 TYVPNFKKAFEHFCIHA----GGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQ 362 (401)
Q Consensus 287 ~l~~~~~~did~~i~Hq----~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll 362 (401)
++. ++|||.+|.+. +.+.+-..+.+++|+..+-. ..++ +=||++.-.++++-+.+==+..||..+|+
T Consensus 99 gv~---p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~---~~nL---sGMGCsAgliai~lA~~lL~~~p~~~ALV 169 (290)
T PF08392_consen 99 GVK---PSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIK---SYNL---SGMGCSAGLIAIDLAKDLLQAHPNSYALV 169 (290)
T ss_pred CCC---HHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCee---eecc---cCCcchhhHHHHHHHHHHHHhCCCcEEEE
Confidence 566 78999998754 56778889999999976643 1333 44555555555544322113467888887
Q ss_pred Eee
Q 044359 363 IAF 365 (401)
Q Consensus 363 ~~~ 365 (401)
++.
T Consensus 170 Vst 172 (290)
T PF08392_consen 170 VST 172 (290)
T ss_pred EEE
Confidence 764
No 290
>PF06924 DUF1281: Protein of unknown function (DUF1281); InterPro: IPR009694 This family consists of several hypothetical enterobacterial proteins of around 170 residues in length. Members of this family are found in Escherichia coli, Salmonella typhimurium and Shigella species. The function of this family is unknown.; PDB: 2IJR_A.
Probab=27.16 E-value=22 Score=29.52 Aligned_cols=39 Identities=18% Similarity=0.278 Sum_probs=25.0
Q ss_pred CHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecC
Q 044359 21 PFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIP 59 (401)
Q Consensus 21 ~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~ 59 (401)
--+.....+.+...++.+..+.+++++..+||..|+|-.
T Consensus 72 AF~~Wl~lL~~~~~Ld~~~~~~i~~l~~QSGi~~~~We~ 110 (134)
T PF06924_consen 72 AFTQWLGLLQKDVWLDPETCRRIHRLWLQSGIGARRWEN 110 (134)
T ss_dssp HHHHHHHHHHTT-B-SSHHHHHHHHHHHTT-GGG--TTS
T ss_pred cHHHHHHHHHhCCcCCHHHHHHHHHHHHHcCcccccccc
Confidence 344445555544457888889999999999999998854
No 291
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.78 E-value=2e+02 Score=27.76 Aligned_cols=80 Identities=8% Similarity=0.048 Sum_probs=48.6
Q ss_pred HHHHHHHhhhcc--CCCcchhhhcceEeecCCC----hHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHH
Q 044359 275 KYLWSVVCKKSK--TYVPNFKKAFEHFCIHAGG----RAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYL 348 (401)
Q Consensus 275 ~~~~~~~~~~l~--~l~~~~~~did~~i~Hq~~----~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~ 348 (401)
...++...++|+ ++. ++|||.+++-... +.+--++.++||++++-- +..+--.|-.++++-+-.+.+.
T Consensus 78 ~l~v~a~r~aL~~~~l~---pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~---Rvpv~glGCaaga~glara~~y 151 (356)
T COG3424 78 PLGVDALRRALDGSPLR---PEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTR---RVPVWGLGCAAGAAGLARARDY 151 (356)
T ss_pred HHHHHHHHHHhccCCCC---HHHCcEEEEEeeccccCCChhHHHHhhcCCCCccc---eeeeecchhhhhhhHHHHHHHH
Confidence 345666677774 454 8999999986643 334457899999988744 2334445555555555555555
Q ss_pred HHcCCCCCCCeEEEE
Q 044359 349 EAKGKVKKGDRVWQI 363 (401)
Q Consensus 349 ~~~g~l~~Gd~vll~ 363 (401)
.+. .|-..++++
T Consensus 152 ~ra---~P~~~vlvV 163 (356)
T COG3424 152 CRA---APDANVLVV 163 (356)
T ss_pred Hhh---CccceEEEE
Confidence 543 344555543
No 292
>PLN02666 5-oxoprolinase
Probab=25.43 E-value=1.4e+02 Score=34.86 Aligned_cols=45 Identities=13% Similarity=0.285 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
.+-..+|++....+.|++|.+..++.++. ..|..++.|+++||++
T Consensus 468 ~~~m~~air~i~~~~G~dpr~~~l~afGG----agp~ha~~lA~~lgi~ 512 (1275)
T PLN02666 468 NEAMCRPIRQLTEMKGYETANHALACFGG----AGPQHACAIARALGMS 512 (1275)
T ss_pred HHHHHHHHHHHHHHcCCCCCCceEEEecC----cHHHHHHHHHHHcCCC
Confidence 34445788888888999999988888876 4677889999999997
No 293
>COG4065 Uncharacterized protein conserved in archaea [Function unknown]
Probab=25.26 E-value=1.8e+02 Score=28.07 Aligned_cols=45 Identities=16% Similarity=0.214 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcC-CcCEEEEee-e-cCCCCCcHHHH
Q 044359 75 REETEEVLCTIVKDLLSKHKINPK-SIDILVTNC-S-IFCPTPSISSM 119 (401)
Q Consensus 75 ~~~~~~la~~Aa~~aL~~ag~~~~-dId~li~~s-~-~~~~~p~~a~~ 119 (401)
+++..+|......+.|++++++.+ |++.|+-++ . -++..|---..
T Consensus 94 resVaelVk~tl~eslkkA~l~i~~Dl~FVVRSTGVtAGF~SPEEVGe 141 (480)
T COG4065 94 RESVAELVKDTLLESLKKASLDIDTDLHFVVRSTGVTAGFASPEEVGE 141 (480)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccccceEEEeecccccCCCCHHHHHH
Confidence 677889999999999999999987 888888665 2 35666653333
No 294
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=24.93 E-value=1.5e+02 Score=29.26 Aligned_cols=64 Identities=11% Similarity=0.154 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCC----------CcHHHHHHHHcCCCC--CcceEEee
Q 044359 73 RSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPT----------PSISSMIINKFGFRS--NIKSINLS 136 (401)
Q Consensus 73 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~----------p~~a~~l~~~LGl~~--~~~~~~i~ 136 (401)
..++.-..+-..|++.+|++.++.++||+.|.+-..+.... -.....|++++|++. +...-|+.
T Consensus 66 ~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a 141 (371)
T COG2377 66 ELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMA 141 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCccHhhhcccccc
Confidence 34555677888999999999999999999776543221111 134678999999862 12344555
No 295
>COG4401 AroH Chorismate mutase [Amino acid transport and metabolism]
Probab=23.79 E-value=2.5e+02 Score=22.64 Aligned_cols=59 Identities=5% Similarity=0.106 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecC--CCCCcHHHHHHHHcCCCCCcceEEeecccch
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIF--CPTPSISSMIINKFGFRSNIKSINLSGMGCS 141 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~ 141 (401)
.+-..+-.++.+++.-.+|+|+--++++-++| ..+|. ..+-..-|.. +++..+++. -|.
T Consensus 21 ~~at~eLl~~i~~~N~~~pedv~sv~~svT~Dl~A~FPA--ka~R~~~gw~-~Vpv~~~Qe-m~V 81 (125)
T COG4401 21 LDATKELLEEIEEENITDPEDVVSVILSVTEDLDAIFPA--KAVRELPGWE-YVPVMCMQE-MPV 81 (125)
T ss_pred HHHHHHHHHHHHHhcCCChhheeeEEEEeccchhhhCcH--HHhccCCCCc-ccceeeeee-ccC
Confidence 33334445556667789999999998876665 33553 4444555776 899999985 443
No 296
>PF11394 DUF2875: Protein of unknown function (DUF2875); InterPro: IPR021531 This family of proteins with unknown function appear to be restricted to Proteobacteria.
Probab=23.55 E-value=2.1e+02 Score=28.75 Aligned_cols=72 Identities=18% Similarity=0.076 Sum_probs=47.7
Q ss_pred CCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccCCcCCCCCcccc
Q 044359 318 LSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDPKERNAWSDR 393 (401)
Q Consensus 318 i~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~~~~~~~~~~ 393 (401)
+.-+.+..++++-++.||||.+|.++.+.-++-.+ -..|.-.+.+-.+.--+ +.+-...+.+.-.+.+|...
T Consensus 374 ~~ldd~~egydi~rrlGntG~ss~~v~i~La~ia~-y~~gg~sa~vnlr~~g~---Ati~mvsPPd~a~ka~~~q~ 445 (451)
T PF11394_consen 374 PELDDVKEGYDIGRRLGNTGVSSALVQIALALIAS-YHDGGPSAVVNLRPDGS---ATIVMVSPPDEARKAANPQN 445 (451)
T ss_pred CCccchhhhccHHHhhhhcccchHHHHHHHHHHhh-ccCCCeeEEEecCCCCc---eEEEEecCCChhhcccchhh
Confidence 33344545578889999999999999887766543 35677777777776433 33444455555556777654
No 297
>PF11392 DUF2877: Protein of unknown function (DUF2877); InterPro: IPR021530 This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.
Probab=23.55 E-value=1.6e+02 Score=23.63 Aligned_cols=45 Identities=16% Similarity=0.095 Sum_probs=27.8
Q ss_pred ChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHH
Q 044359 305 GRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLE 349 (401)
Q Consensus 305 ~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~ 349 (401)
+..+.+.+..-.+-+++.+......+-++||++.+|.++.+...+
T Consensus 65 ~~~~~~l~~~l~~~~~~~~~~~i~~ll~iGhTSG~D~L~Gi~~~l 109 (110)
T PF11392_consen 65 SEPLLRLLHALSSGDSEDLEEAIRRLLAIGHTSGADTLLGILLGL 109 (110)
T ss_pred hHHHHHHHHHHHcCCchHHHHHHHHHHHcCCCchHHHHHHHHHHh
Confidence 334444333323322344444467788899999999999887654
No 298
>PF11165 DUF2949: Protein of unknown function (DUF2949); InterPro: IPR021336 This family of proteins with unknown function appear to be restricted to Cyanobacteria.
Probab=23.35 E-value=90 Score=22.08 Aligned_cols=39 Identities=18% Similarity=0.106 Sum_probs=28.6
Q ss_pred ChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHH
Q 044359 305 GRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCY 347 (401)
Q Consensus 305 ~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~ 347 (401)
+.++++.+.+.++|+++.+ ....+.-....+.+|+.|-+
T Consensus 2 ~~~l~~fL~~el~ls~~~i----~lalr~~~~~~~pLPmiLWq 40 (58)
T PF11165_consen 2 STQLIRFLQEELGLSEASI----ALALRQQEQDQGPLPMILWQ 40 (58)
T ss_pred cHHHHHHHHHHcCCCHHHH----HHHHHhHhccCCCcchHHHH
Confidence 3567788899999998887 45566666667777777743
No 299
>PRK08304 stage V sporulation protein AD; Validated
Probab=23.31 E-value=3.3e+02 Score=26.61 Aligned_cols=89 Identities=16% Similarity=0.160 Sum_probs=49.9
Q ss_pred HHHHHHHH---HHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCC-------CcceEEeec---------cc
Q 044359 79 EEVLCTIV---KDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRS-------NIKSINLSG---------MG 139 (401)
Q Consensus 79 ~~la~~Aa---~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~-------~~~~~~i~~---------~g 139 (401)
..||-.|+ .+=|++.|.+|+|-|+|+.+-.. .....+...+.++-|+.- ....||... .|
T Consensus 204 aaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg-~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~ 282 (337)
T PRK08304 204 AAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLG-RVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCA 282 (337)
T ss_pred hhhhHHHHHHHHHHHHHcCCChhhccEEEEcchH-HHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccc
Confidence 45555554 45577899999999999876321 111223444444445421 123454221 23
Q ss_pred chhHHHHHHHHHHHHHcCCCCeEEEEeecc
Q 044359 140 CSAGILSISLVKDLLKVHKNSLALVLSMEA 169 (401)
Q Consensus 140 C~~~~~aL~~A~~~i~~g~~~~vLvv~~e~ 169 (401)
|+..+. -..-...|+.|..++||+|+.-.
T Consensus 283 csa~v~-~~~~~~~~~~g~~~rvl~v~tGa 311 (337)
T PRK08304 283 CSAVVT-YGYLLKELQKGKLKRVLVVATGA 311 (337)
T ss_pred hhHHHH-HHHHHHHHhcCCceEEEEEEchh
Confidence 433332 33345566778899999998654
No 300
>PLN02932 3-ketoacyl-CoA synthase
Probab=23.00 E-value=2.2e+02 Score=29.33 Aligned_cols=66 Identities=6% Similarity=0.048 Sum_probs=40.2
Q ss_pred CCCcchhhhcceEeecC----CChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHH---HHcCCCCCCCe
Q 044359 287 TYVPNFKKAFEHFCIHA----GGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYL---EAKGKVKKGDR 359 (401)
Q Consensus 287 ~l~~~~~~did~~i~Hq----~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~---~~~g~l~~Gd~ 359 (401)
|+. ++|||.+|... +.+.+-..+.++||++++-.. .+ .+-+|++.-+++|+.+ ++.+ ++.+
T Consensus 164 gi~---p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~---fd---L~gmGCSggl~aL~lA~~ll~~~---~~~~ 231 (478)
T PLN02932 164 GIS---PSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKS---LN---LGGMGCSAGVIAIDAAKSLLQVH---RNTY 231 (478)
T ss_pred CCC---HHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceE---EE---eccchhhhHHHHHHHHHHHHHcC---CCCe
Confidence 565 79999998754 344555678999999744221 12 3446666666676654 4333 4555
Q ss_pred EEEEe
Q 044359 360 VWQIA 364 (401)
Q Consensus 360 vll~~ 364 (401)
+|+++
T Consensus 232 aLVVs 236 (478)
T PLN02932 232 ALVVS 236 (478)
T ss_pred EEEEE
Confidence 55544
No 301
>PLN00415 3-ketoacyl-CoA synthase
Probab=22.79 E-value=2e+02 Score=29.45 Aligned_cols=69 Identities=9% Similarity=0.051 Sum_probs=41.0
Q ss_pred CCCcchhhhcceEeecCCC----hHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEE
Q 044359 287 TYVPNFKKAFEHFCIHAGG----RAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQ 362 (401)
Q Consensus 287 ~l~~~~~~did~~i~Hq~~----~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll 362 (401)
|+. ++|||++|....+ +..--.+.+++|++++-.. -..+.||++.-.++|..+.+-=+..++.++|+
T Consensus 150 Gi~---p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~------~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLV 220 (466)
T PLN00415 150 GIE---PREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKT------YNLSGMGCSAGAISVDLATNLLKANPNTYAVI 220 (466)
T ss_pred CCC---HHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceE------EEeccccchHHHHHHHHHHHHHHhCCCCEEEE
Confidence 555 7999998875433 3344468889999744221 22355666666666655433112346777776
Q ss_pred Ee
Q 044359 363 IA 364 (401)
Q Consensus 363 ~~ 364 (401)
++
T Consensus 221 Vs 222 (466)
T PLN00415 221 VS 222 (466)
T ss_pred EE
Confidence 55
No 302
>PLN02377 3-ketoacyl-CoA synthase
Probab=21.89 E-value=3.5e+02 Score=28.07 Aligned_cols=39 Identities=3% Similarity=-0.015 Sum_probs=23.4
Q ss_pred HHHHHHHhCC-CCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 85 IVKDLLSKHK-INPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 85 Aa~~aL~~ag-~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
..++.++..+ ...++||+++... ..+..-..+++.||++
T Consensus 379 ~~~~~l~~~~p~~~~didhf~iHq----ggr~IId~v~k~LgL~ 418 (502)
T PLN02377 379 LFNKKMKPYIPDFKLAFDHFCIHA----GGRAVIDELEKNLQLL 418 (502)
T ss_pred HHHHHHhhccCCcHhhcCEEEECC----CCHHHHHHHHHHcCCC
Confidence 3344454443 3468899776543 1233456789999996
No 303
>PRK08329 threonine synthase; Validated
Probab=21.71 E-value=1e+02 Score=30.14 Aligned_cols=62 Identities=26% Similarity=0.352 Sum_probs=42.0
Q ss_pred HHHHHHHH----cCCCchhhhhhHHHHhhhcC---cccchHHHHHHHHHHcCCCCCCCeEEEEeeccch
Q 044359 308 IIDAVEEN----LKLSKEDGEASRMTLYRFGN---TSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGF 369 (401)
Q Consensus 308 ~~~~~~~~----lgi~~e~~~~s~~~~~~~Gn---~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~ 369 (401)
.++.+.+. ..++.+.+......+.+.|- .+|+..+..+.++.++|.++++++|+++--|.|+
T Consensus 276 ~~~~l~~~~g~~~~V~d~e~~~a~~~l~~~Gi~vepssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~gl 344 (347)
T PRK08329 276 MLRALEESNGFCISVGEEETRAALHWLRRMGFLVEPTSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGL 344 (347)
T ss_pred HHHHHHHhCCEEEEECHHHHHHHHHHHHhcCceECccHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCc
Confidence 44555543 55677766433333333332 3467778888888999999999999999888885
No 304
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.19 E-value=5.3e+02 Score=23.54 Aligned_cols=76 Identities=14% Similarity=0.149 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecC--CCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIF--CPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
+-..|-..+.+.||+-+ -+.+|.|.|+|+++ ...|.....|++++.-...++.+.-.+ +.+.||+
T Consensus 48 eL~~M~~~t~~aAl~La---da~vdvI~Y~CtsgS~i~G~~~d~ei~~~ie~~~~v~vvTts~----Avv~aL~------ 114 (238)
T COG3473 48 ELLKMESYTERAALELA---DAGVDVIVYGCTSGSLIGGPGYDKEIAQRIEEAKGVPVVTTST----AVVEALN------ 114 (238)
T ss_pred HHHHHHHHHHHHHHhcC---ccccCEEEEeccceeeecCCchhHHHHHHHHhccCCceeechH----HHHHHHH------
Confidence 34456667777777744 35689999987543 335666677777775433455555442 2333332
Q ss_pred HcCCCCeEEEEe
Q 044359 155 KVHKNSLALVLS 166 (401)
Q Consensus 155 ~~g~~~~vLvv~ 166 (401)
+=..+++.|++
T Consensus 115 -al~a~ri~vlT 125 (238)
T COG3473 115 -ALGAQRISVLT 125 (238)
T ss_pred -hhCcceEEEec
Confidence 11367777776
No 305
>cd04493 BRCA2DBD_OB1 BRCA2DBD_OB1: A subfamily of OB folds corresponding to the first OB fold (OB1) of the 800-amino acid C-terminal ssDNA binding domain (DBD) of BRCA2 (breast cancer susceptibility gene 2) protein, called BRCA2DBD. BRCA2 participates in homologous recombination-mediated repair of double-strand DNA breaks. It stimulates the displacement of Replication protein A (RPA), the most abundant eukaryotic ssDNA binding protein. It also facilitates filament formation. Mutations that map throughout the BRCA2 protein are associated with breast cancer susceptibility. BRCA2 is a large nuclear protein and its most conserved region is the C-terminal BRCA2DBD. BRCA2DBD binds ssDNA in vitro, and is composed of five structural domains, three of which are OB folds (OB1, OB2, and OB3). BRCA2DBD OB2 and OB3 are arranged in tandem, and their mode of binding can be considered qualitatively similar to two OB folds of RPA1, DBD-A and DBD-B (the major DBDs of RPA). BRCA2DBD OB1 binds DNA weakly.
Probab=21.06 E-value=1.3e+02 Score=23.88 Aligned_cols=22 Identities=27% Similarity=0.373 Sum_probs=18.4
Q ss_pred HHHHHHHcCCCCCCCeEEEEee
Q 044359 344 ELCYLEAKGKVKKGDRVWQIAF 365 (401)
Q Consensus 344 ~L~~~~~~g~l~~Gd~vll~~~ 365 (401)
.|.+++++|+++.|+++.+++.
T Consensus 41 ~L~~~l~~gkl~vGqKL~i~GA 62 (100)
T cd04493 41 PLTNLVRKGKLRVGQKLRICGA 62 (100)
T ss_pred HHHHHHHcCCeecccEEEEECc
Confidence 4678899999999999987654
No 306
>TIGR02609 doc_partner putative addiction module antidote. Members of this protein family are putative addiction module antidote proteins that appear recurringly in two-gene operons with members of the Doc (death-on-curing) family TIGR01550. Members of this family contain a SpoVT/AbrB-like domain (pfam04014). Note that the gene pairs with a member of this family tend to be found on bacterial chromosomes, not on plasmids.
Probab=21.04 E-value=49 Score=24.46 Aligned_cols=35 Identities=17% Similarity=0.143 Sum_probs=28.1
Q ss_pred HhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeecc
Q 044359 330 LYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGS 367 (401)
Q Consensus 330 ~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~ 367 (401)
+++.||..+.++|-.+.+.+ .+.+||.|-+.--+.
T Consensus 3 i~k~GNS~~vtIPk~i~~~l---gl~~Gd~v~v~~~~~ 37 (74)
T TIGR02609 3 IRKVGNSLVVTLPKEVLESL---GLKEGDTLYVDEEEG 37 (74)
T ss_pred EEEECCeeEEEECHHHHHHc---CcCCCCEEEEEEECC
Confidence 46789999999999987776 578999997655553
No 307
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=20.86 E-value=1.6e+02 Score=37.11 Aligned_cols=75 Identities=9% Similarity=0.077 Sum_probs=45.3
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEE-eeecCCCCCcHHHHHHHHcCCCC----CcceE----EeecccchhHHHHHHHHHHH
Q 044359 83 CTIVKDLLSKHKINPKSIDILVT-NCSIFCPTPSISSMIINKFGFRS----NIKSI----NLSGMGCSAGILSISLVKDL 153 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~l~~~LGl~~----~~~~~----~i~~~gC~~~~~aL~~A~~~ 153 (401)
.++.++||+++|++|++||.|-. +|.+..--|.-..-|.+-+|-.. .+..- .|....+++|+.+|-.+.-.
T Consensus 318 ~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~la 397 (2582)
T TIGR02813 318 AKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLA 397 (2582)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHH
Confidence 68999999999999999998864 34332223333445555555321 12222 22224566777777666666
Q ss_pred HHcC
Q 044359 154 LKVH 157 (401)
Q Consensus 154 i~~g 157 (401)
++.+
T Consensus 398 l~~~ 401 (2582)
T TIGR02813 398 LHHK 401 (2582)
T ss_pred HhcC
Confidence 6665
No 308
>PRK01433 hscA chaperone protein HscA; Provisional
Probab=20.66 E-value=4.4e+02 Score=27.99 Aligned_cols=65 Identities=12% Similarity=0.067 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSIS 148 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~ 148 (401)
...+-....++++|++++ +.+||.|+.++ ++ .+|.+-..|.+.+|.. ...+++-.-|.+...|++
T Consensus 288 ~l~~~~~~~i~~~L~~a~--~~~Id~ViLvGGss--riP~v~~~l~~~f~~~---~~~~~npdeaVA~GAAi~ 353 (595)
T PRK01433 288 PLVERTINIAQECLEQAG--NPNIDGVILVGGAT--RIPLIKDELYKAFKVD---ILSDIDPDKAVVWGAALQ 353 (595)
T ss_pred HHHHHHHHHHHHHHhhcC--cccCcEEEEECCcc--cChhHHHHHHHHhCCC---ceecCCchHHHHHHHHHH
Confidence 334455677889999998 67999999775 33 3788888899998864 223444334444444444
No 309
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=20.53 E-value=3.3e+02 Score=26.58 Aligned_cols=27 Identities=15% Similarity=0.258 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHhCCC-CcCCcCEE
Q 044359 77 ETEEVLCTIVKDLLSKHKI-NPKSIDIL 103 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~-~~~dId~l 103 (401)
...++...|+++|+.++|| +|.|+-.|
T Consensus 130 aqV~~vA~aV~~AM~~AGI~dpaDVH~V 157 (366)
T TIGR02714 130 AQITETAAAVKRAMRDAGIADPADVHFV 157 (366)
T ss_pred HHHHHHHHHHHHHHHHcCCCChhHeeEE
Confidence 3467888999999999999 67777544
Done!