Query 044359
Match_columns 401
No_of_seqs 209 out of 2024
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 03:50:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044359.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044359hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ewp_A 3-oxoacyl-[acyl-carrier 100.0 1.2E-58 4.2E-63 453.2 28.3 321 3-379 13-350 (350)
2 3e1h_A PKSIIINC, putative unch 100.0 2.8E-55 9.5E-60 440.8 35.5 366 2-400 30-424 (465)
3 3gwa_A 3-oxoacyl-(acyl-carrier 100.0 1.8E-55 6.3E-60 432.4 29.1 331 1-378 28-365 (365)
4 3il6_A 3-oxoacyl-[acyl-carrier 100.0 5.1E-55 1.7E-59 422.3 30.4 316 2-378 3-321 (321)
5 3euo_A Type III pentaketide sy 100.0 2.1E-54 7.3E-59 426.6 33.7 349 3-379 2-379 (379)
6 4efi_A 3-oxoacyl-(acyl-carrier 100.0 2E-55 6.8E-60 430.6 23.2 326 2-382 15-347 (354)
7 3il3_A 3-oxoacyl-[acyl-carrier 100.0 1.3E-54 4.3E-59 419.7 28.2 308 3-378 9-323 (323)
8 3ov2_A Curcumin synthase; type 100.0 2.1E-53 7.3E-58 421.2 34.7 349 2-380 15-388 (393)
9 3oit_A OS07G0271500 protein; t 100.0 2.8E-53 9.5E-58 419.5 34.7 349 2-379 9-382 (387)
10 4dfe_A 3-oxoacyl-[acyl-carrier 100.0 1.7E-53 5.9E-58 413.9 28.5 316 3-378 11-333 (333)
11 3v7i_A Putative polyketide syn 100.0 1.1E-52 3.9E-57 416.6 32.6 345 3-379 26-413 (413)
12 3h78_A PQS biosynthetic enzyme 100.0 5.9E-53 2E-57 413.4 27.6 321 2-380 24-353 (359)
13 3led_A 3-oxoacyl-acyl carrier 100.0 1.3E-52 4.3E-57 415.0 29.7 337 1-379 22-392 (392)
14 3s21_A 3-oxoacyl-[ACP] synthas 100.0 3.1E-52 1.1E-56 406.8 24.5 315 1-378 10-345 (345)
15 3s3l_A CERJ; acyltransferase, 100.0 2.7E-50 9.1E-55 394.4 27.9 331 1-392 3-346 (357)
16 2h84_A Steely1; thiolase-fold, 100.0 4.9E-49 1.7E-53 388.5 37.0 346 3-379 13-373 (374)
17 1ted_A PKS18; thiolase fold, s 100.0 6.1E-49 2.1E-53 390.1 34.7 347 3-380 32-392 (393)
18 1i88_A CHS2, chalcone synthase 100.0 2.4E-48 8.3E-53 385.2 35.8 349 2-380 15-388 (389)
19 3awk_A Chalcone synthase-like 100.0 2.9E-48 1E-52 385.9 35.1 348 2-379 28-400 (402)
20 3a5r_A Benzalacetone synthase; 100.0 3.4E-48 1.2E-52 383.9 35.5 350 3-382 12-386 (387)
21 2p0u_A Stilbenecarboxylate syn 100.0 3.4E-48 1.2E-52 386.6 35.4 348 2-379 33-405 (413)
22 1xes_A Dihydropinosylvin synth 100.0 2.8E-48 9.7E-53 387.2 33.2 349 2-380 37-411 (413)
23 1u0m_A Putative polyketide syn 100.0 2.6E-48 8.8E-53 384.2 31.4 343 3-381 9-357 (382)
24 1ee0_A 2-pyrone synthase; poly 100.0 7.3E-48 2.5E-52 383.2 34.4 350 3-382 21-395 (402)
25 2d3m_A Pentaketide chromone sy 100.0 1.4E-47 4.9E-52 381.7 34.0 347 2-380 28-404 (406)
26 2x3e_A 3-oxoacyl-[acyl-carrier 100.0 4.2E-47 1.4E-51 368.7 28.9 319 2-384 4-329 (331)
27 1mzj_A Beta-ketoacylsynthase I 100.0 9.3E-47 3.2E-51 367.4 26.9 309 2-380 10-333 (339)
28 1hnj_A Beta-ketoacyl-acyl carr 100.0 2.3E-46 8E-51 361.2 27.8 305 3-378 2-317 (317)
29 3v4n_A HMG-COA synthase; hydro 100.0 1.4E-46 4.6E-51 371.2 19.6 306 3-384 7-330 (388)
30 1zow_A 3-oxoacyl-[acyl-carrier 100.0 4.8E-45 1.6E-49 351.3 28.4 307 3-379 2-312 (313)
31 3sqz_A Putative hydroxymethylg 100.0 2.7E-46 9.3E-51 371.9 19.3 306 3-382 36-358 (425)
32 2v4w_A Hydroxymethylglutaryl-C 100.0 1.6E-45 5.4E-50 367.3 22.7 306 2-382 4-381 (460)
33 2ebd_A 3-oxoacyl-[acyl-carrier 100.0 3.8E-44 1.3E-48 344.3 29.7 304 3-378 2-309 (309)
34 1ub7_A 3-oxoacyl-[acyl-carrier 100.0 1.6E-44 5.6E-49 349.0 26.8 313 4-380 2-321 (322)
35 1u6e_A 3-oxoacyl-[acyl-carrier 100.0 2.5E-44 8.5E-49 349.6 27.5 309 2-378 11-332 (335)
36 3tsy_A Fusion protein 4-coumar 100.0 1.7E-43 5.8E-48 388.6 34.1 349 2-383 602-978 (979)
37 1xpm_A 3-hydroxy-3-methylgluta 100.0 9.5E-44 3.3E-48 352.8 23.5 305 3-384 2-324 (396)
38 2p8u_A Hydroxymethylglutaryl-C 100.0 1.7E-43 5.8E-48 357.6 23.6 309 3-382 24-400 (478)
39 2f82_A HMG-COA synthase; HMGS1 100.0 8.5E-43 2.9E-47 351.0 24.2 317 2-381 2-372 (450)
40 2wya_A Hydroxymethylglutaryl-C 100.0 2.9E-43 9.8E-48 355.5 18.1 321 2-384 4-383 (460)
41 3lma_A Stage V sporulation pro 99.9 2.2E-24 7.6E-29 205.5 18.3 244 75-372 52-314 (347)
42 4e1l_A Acetoacetyl-COA thiolas 99.8 5E-19 1.7E-23 175.2 20.9 94 78-172 29-123 (395)
43 3ss6_A Acetyl-COA acetyltransf 99.8 7.1E-19 2.4E-23 174.0 19.8 94 78-172 29-123 (394)
44 4dd5_A Acetyl-COA acetyltransf 99.8 1.4E-18 4.8E-23 172.0 20.4 94 78-172 31-125 (396)
45 3ho9_A 3-oxoacyl-[acyl-carrier 99.8 3.6E-17 1.2E-21 163.4 23.2 314 2-378 18-426 (427)
46 1tqy_A Beta-ketoacyl synthase/ 99.8 2.5E-17 8.5E-22 164.5 20.9 316 2-380 3-418 (424)
47 3o04_A LMO2201 protein, beta-k 99.8 4.3E-17 1.5E-21 162.2 22.0 315 2-378 4-410 (413)
48 2gqd_A 3-oxoacyl-[acyl-carrier 99.8 1.6E-16 5.6E-21 159.0 26.1 315 2-378 28-434 (437)
49 1j3n_A 3-oxoacyl-(acyl-carrier 99.7 8.9E-17 3E-21 159.7 21.5 314 1-377 1-406 (408)
50 3kzu_A 3-oxoacyl-(acyl-carrier 99.7 6.7E-17 2.3E-21 161.4 20.6 318 1-378 9-425 (428)
51 3svk_A Acetyl-COA acetyltransf 99.7 3.5E-17 1.2E-21 162.3 17.1 94 78-172 32-128 (407)
52 1e5m_A KAS II, beta ketoacyl a 99.7 3.7E-16 1.3E-20 155.6 23.3 314 2-377 7-413 (416)
53 3goa_A 3-ketoacyl-COA thiolase 99.7 3.4E-16 1.2E-20 154.3 20.7 94 78-172 27-123 (387)
54 2iik_A 3-ketoacyl-COA thiolase 99.7 1.4E-16 4.6E-21 158.7 14.9 94 78-172 55-149 (418)
55 1ox0_A Beta ketoacyl-acyl carr 99.7 2.6E-15 8.9E-20 150.1 23.3 316 2-378 23-426 (430)
56 4ewg_A Beta-ketoacyl synthase; 99.7 2.4E-15 8E-20 149.6 22.8 311 1-378 5-410 (412)
57 4ddo_A 3-oxoacyl-[acyl-carrier 99.7 6.3E-16 2.2E-20 155.4 18.5 318 2-380 24-443 (451)
58 2vu1_A Acetyl-COA acetyltransf 99.7 1E-15 3.5E-20 151.2 19.7 94 78-172 27-121 (392)
59 2gp6_A 3-oxoacyl-[acyl-carrier 99.7 8.9E-15 3E-19 146.3 25.8 316 2-377 28-432 (434)
60 1wl4_A Acetyl-coenzyme A acety 99.7 1.3E-15 4.5E-20 150.7 19.5 94 78-172 30-124 (397)
61 1ulq_A Putative acetyl-COA ace 99.7 2.1E-15 7.3E-20 149.4 20.9 94 78-172 26-121 (401)
62 1tqy_B Actinorhodin polyketide 99.7 1.8E-14 6.3E-19 143.3 24.9 310 2-379 9-411 (415)
63 2ib8_A Acetyl-COA acetyltransf 99.6 3.1E-14 1.1E-18 140.7 23.6 94 78-172 32-126 (395)
64 1wdk_C 3-ketoacyl-COA thiolase 99.6 8.2E-15 2.8E-19 144.6 18.5 94 78-172 30-126 (390)
65 3mqd_A Beta-ketoacyl synthase; 99.6 9.7E-15 3.3E-19 145.8 18.9 309 2-377 23-424 (428)
66 2iwz_A 3-oxoacyl-[acyl-carrier 99.6 8.7E-15 3E-19 146.6 18.2 316 2-377 21-436 (438)
67 2vba_A 3-oxoacyl-[acyl-carrier 99.6 5.5E-14 1.9E-18 139.4 23.3 308 1-378 1-403 (406)
68 1afw_A 3-ketoacetyl-COA thiola 99.6 2E-14 6.9E-19 141.9 19.0 94 78-172 35-133 (393)
69 2wu9_A 3-ketoacyl-COA thiolase 99.6 1.9E-14 6.5E-19 143.9 18.0 94 78-172 55-150 (442)
70 2ix4_A 3-oxoacyl-[acyl-carrier 99.6 2.4E-14 8.1E-19 143.1 18.4 253 77-377 87-429 (431)
71 2wge_A 3-oxoacyl-[acyl-carrier 99.6 1.7E-13 5.7E-18 136.3 22.6 316 2-377 12-414 (416)
72 2qo3_A Eryaii erythromycin pol 99.6 4.9E-13 1.7E-17 144.8 25.8 249 78-380 95-432 (915)
73 3hhd_A Fatty acid synthase; tr 99.5 3.1E-12 1.1E-16 139.1 25.8 322 2-380 4-410 (965)
74 2hg4_A DEBS, 6-deoxyerythronol 99.4 4E-12 1.4E-16 137.7 19.0 255 78-380 116-454 (917)
75 4egv_A Acetyl-COA acetyltransf 99.2 2.3E-10 7.8E-15 116.6 16.5 93 78-172 42-147 (520)
76 3zen_D Fatty acid synthase; tr 99.0 2.9E-09 9.9E-14 126.0 16.1 260 77-380 2646-3012(3089)
77 2vz8_A Fatty acid synthase; tr 98.8 7.4E-07 2.5E-11 105.6 24.9 320 1-379 1-407 (2512)
78 2pff_A Fatty acid synthase sub 98.2 1.1E-06 3.8E-11 97.0 5.8 117 79-202 1013-1192(1688)
79 2uv8_A Fatty acid synthase sub 97.8 6.2E-05 2.1E-09 85.7 11.5 118 78-202 1211-1391(1887)
80 2uv9_A Fatty acid synthase alp 97.8 8.3E-05 2.9E-09 84.5 11.3 118 78-202 1186-1366(1878)
81 3gwa_A 3-oxoacyl-(acyl-carrier 94.5 0.12 4E-06 49.7 9.0 84 77-167 263-352 (365)
82 4dfe_A 3-oxoacyl-[acyl-carrier 94.5 0.11 3.9E-06 49.1 8.7 83 77-166 231-319 (333)
83 3s3l_A CERJ; acyltransferase, 94.4 0.086 2.9E-06 50.6 7.8 83 77-166 235-324 (357)
84 3il3_A 3-oxoacyl-[acyl-carrier 94.4 0.13 4.4E-06 48.6 8.9 84 77-167 221-310 (323)
85 4ewp_A 3-oxoacyl-[acyl-carrier 94.4 0.11 3.7E-06 49.6 8.3 87 76-166 245-335 (350)
86 1mzj_A Beta-ketoacylsynthase I 94.3 0.12 4.3E-06 48.8 8.7 82 78-166 229-317 (339)
87 2x3e_A 3-oxoacyl-[acyl-carrier 94.3 0.087 3E-06 49.8 7.5 82 78-166 222-309 (331)
88 3h78_A PQS biosynthetic enzyme 94.2 0.11 3.9E-06 49.7 8.2 84 77-166 251-337 (359)
89 3lma_A Stage V sporulation pro 94.2 0.083 2.8E-06 50.2 6.8 89 79-169 206-309 (347)
90 3s21_A 3-oxoacyl-[ACP] synthas 94.1 0.12 4E-06 49.3 7.8 89 76-168 242-333 (345)
91 4efi_A 3-oxoacyl-(acyl-carrier 93.9 0.11 3.8E-06 49.7 7.4 87 77-167 241-330 (354)
92 1u6e_A 3-oxoacyl-[acyl-carrier 93.6 0.17 5.8E-06 47.7 8.0 84 79-166 231-318 (335)
93 1hnj_A Beta-ketoacyl-acyl carr 93.3 0.25 8.6E-06 46.1 8.5 84 78-168 216-305 (317)
94 1zow_A 3-oxoacyl-[acyl-carrier 93.2 0.25 8.6E-06 46.0 8.5 82 78-166 210-297 (313)
95 2ebd_A 3-oxoacyl-[acyl-carrier 93.0 0.25 8.4E-06 45.9 8.0 83 78-167 208-296 (309)
96 1ub7_A 3-oxoacyl-[acyl-carrier 92.6 0.27 9.1E-06 46.1 7.7 82 78-166 218-305 (322)
97 1ted_A PKS18; thiolase fold, s 91.9 0.16 5.3E-06 49.3 5.2 82 78-166 285-376 (393)
98 4e1l_A Acetoacetyl-COA thiolas 91.4 0.43 1.5E-05 46.2 7.7 76 83-165 297-380 (395)
99 1u0m_A Putative polyketide syn 91.2 0.15 5E-06 49.3 4.1 75 85-166 257-340 (382)
100 1ulq_A Putative acetyl-COA ace 91.1 0.6 2E-05 45.3 8.5 94 83-200 299-399 (401)
101 3svk_A Acetyl-COA acetyltransf 90.6 0.56 1.9E-05 45.7 7.7 42 83-128 308-349 (407)
102 3ss6_A Acetyl-COA acetyltransf 90.1 0.6 2.1E-05 45.2 7.4 42 82-127 294-335 (394)
103 3led_A 3-oxoacyl-acyl carrier 89.2 0.49 1.7E-05 45.8 6.0 86 76-167 287-378 (392)
104 4dd5_A Acetyl-COA acetyltransf 89.0 0.58 2E-05 45.3 6.3 42 82-127 297-338 (396)
105 1wl4_A Acetyl-coenzyme A acety 88.3 0.71 2.4E-05 44.7 6.5 42 82-127 297-338 (397)
106 2vu1_A Acetyl-COA acetyltransf 88.0 1 3.4E-05 43.5 7.3 42 82-127 292-333 (392)
107 2h84_A Steely1; thiolase-fold, 88.0 0.54 1.8E-05 45.0 5.3 81 78-166 265-358 (374)
108 3goa_A 3-ketoacyl-COA thiolase 87.0 1.3 4.4E-05 42.7 7.4 41 82-126 284-324 (387)
109 1wdk_C 3-ketoacyl-COA thiolase 86.8 1.2 4.2E-05 42.9 7.1 42 82-127 287-328 (390)
110 3tsy_A Fusion protein 4-coumar 86.8 1.4 4.9E-05 47.7 8.4 78 76-157 860-943 (979)
111 4egv_A Acetyl-COA acetyltransf 85.9 1.3 4.5E-05 44.5 7.0 81 82-166 319-407 (520)
112 2d3m_A Pentaketide chromone sy 85.2 2.1 7.2E-05 41.5 7.9 85 77-166 287-388 (406)
113 1xpm_A 3-hydroxy-3-methylgluta 83.7 0.73 2.5E-05 44.6 3.8 30 78-107 205-234 (396)
114 1xho_A Chorismate mutase; sout 82.9 4.7 0.00016 32.8 7.5 54 80-137 51-106 (148)
115 2iik_A 3-ketoacyl-COA thiolase 82.3 1.7 5.9E-05 42.3 5.9 41 83-127 316-356 (418)
116 2wu9_A 3-ketoacyl-COA thiolase 78.3 4.5 0.00015 39.7 7.4 41 82-127 317-358 (442)
117 3euo_A Type III pentaketide sy 78.1 1.9 6.4E-05 41.4 4.5 85 77-166 261-364 (379)
118 1xes_A Dihydropinosylvin synth 77.9 5.6 0.00019 38.5 7.9 85 77-166 297-395 (413)
119 3e1h_A PKSIIINC, putative unch 77.3 1.9 6.6E-05 42.6 4.4 85 77-166 290-393 (465)
120 2p0u_A Stilbenecarboxylate syn 76.3 6.3 0.00022 38.2 7.8 85 77-166 292-390 (413)
121 1i88_A CHS2, chalcone synthase 76.3 5.7 0.00019 38.1 7.4 86 77-167 274-373 (389)
122 1ee0_A 2-pyrone synthase; poly 75.8 6.7 0.00023 37.8 7.8 85 77-166 279-377 (402)
123 3sqz_A Putative hydroxymethylg 75.4 1.5 5E-05 43.0 2.9 90 77-166 238-340 (425)
124 3awk_A Chalcone synthase-like 75.2 7.2 0.00025 37.6 7.8 86 77-167 287-386 (402)
125 3v4n_A HMG-COA synthase; hydro 75.1 1.4 4.9E-05 42.5 2.7 31 77-107 209-239 (388)
126 3ho9_A 3-oxoacyl-[acyl-carrier 74.9 1.4 4.9E-05 43.0 2.8 76 80-157 292-375 (427)
127 3a5r_A Benzalacetone synthase; 74.5 6.4 0.00022 37.7 7.2 85 77-166 270-368 (387)
128 3il6_A 3-oxoacyl-[acyl-carrier 73.5 5.3 0.00018 37.2 6.2 81 79-167 220-308 (321)
129 3ov2_A Curcumin synthase; type 73.1 4.1 0.00014 39.2 5.5 84 78-166 275-372 (393)
130 2v4w_A Hydroxymethylglutaryl-C 72.5 6.9 0.00024 38.6 6.9 38 86-127 229-270 (460)
131 3kzu_A 3-oxoacyl-(acyl-carrier 71.5 4.1 0.00014 39.7 5.1 74 81-157 294-375 (428)
132 1afw_A 3-ketoacetyl-COA thiola 70.4 5.5 0.00019 38.3 5.7 41 82-127 295-336 (393)
133 3r6m_A YEAZ, resuscitation pro 68.2 4.3 0.00015 35.6 4.0 58 80-137 37-95 (213)
134 2gel_A Putative GRAM negative 67.6 4.5 0.00016 35.9 4.1 58 80-137 36-94 (231)
135 1j3n_A 3-oxoacyl-(acyl-carrier 66.6 1.8 6.3E-05 41.8 1.4 78 80-157 275-358 (408)
136 1dbf_A Protein (chorismate mut 65.8 18 0.00062 28.7 6.7 52 82-137 24-78 (127)
137 2a6a_A Hypothetical protein TM 65.6 3.3 0.00011 36.6 2.7 58 80-137 47-105 (218)
138 1ufy_A Chorismate mutase; shik 65.5 19 0.00066 28.3 6.8 52 82-137 23-77 (122)
139 3eno_A Putative O-sialoglycopr 63.0 11 0.00039 35.3 6.1 32 80-111 54-85 (334)
140 2ib8_A Acetyl-COA acetyltransf 62.3 6.2 0.00021 37.9 4.2 42 82-127 297-338 (395)
141 3oit_A OS07G0271500 protein; t 61.6 11 0.00039 36.0 6.0 84 77-166 267-367 (387)
142 2gqd_A 3-oxoacyl-[acyl-carrier 61.2 4.4 0.00015 39.6 2.9 78 80-157 301-384 (437)
143 1e5m_A KAS II, beta ketoacyl a 60.9 4.2 0.00014 39.4 2.7 78 80-157 281-364 (416)
144 1tqy_A Beta-ketoacyl synthase/ 60.5 4.4 0.00015 39.3 2.8 77 81-157 284-366 (424)
145 3v7i_A Putative polyketide syn 59.2 27 0.00091 33.8 8.1 77 80-166 307-398 (413)
146 4ddo_A 3-oxoacyl-[acyl-carrier 55.3 4.9 0.00017 39.4 2.2 77 81-157 309-390 (451)
147 3o04_A LMO2201 protein, beta-k 52.8 3.3 0.00011 40.1 0.5 26 81-106 278-303 (413)
148 1tqy_B Actinorhodin polyketide 52.7 4.3 0.00015 39.3 1.3 75 82-157 281-360 (415)
149 2f82_A HMG-COA synthase; HMGS1 52.7 18 0.00061 35.4 5.8 41 81-125 215-261 (450)
150 2iwz_A 3-oxoacyl-[acyl-carrier 49.8 8.2 0.00028 37.6 2.8 27 80-106 301-327 (438)
151 2gp6_A 3-oxoacyl-[acyl-carrier 49.5 6.1 0.00021 38.6 1.7 27 80-106 302-328 (434)
152 2ix4_A 3-oxoacyl-[acyl-carrier 49.4 4.4 0.00015 39.5 0.7 27 80-106 294-320 (431)
153 3qbx_A Anhydro-N-acetylmuramic 49.4 17 0.00059 34.6 4.8 52 76-127 64-123 (371)
154 1ox0_A Beta ketoacyl-acyl carr 48.8 9.9 0.00034 36.9 3.1 76 80-157 296-376 (430)
155 2qo3_A Eryaii erythromycin pol 48.4 9.2 0.00031 41.2 3.0 78 80-157 286-372 (915)
156 2ivn_A O-sialoglycoprotein end 44.7 26 0.0009 32.6 5.3 31 80-110 49-79 (330)
157 3hhd_A Fatty acid synthase; tr 42.0 28 0.00097 37.6 5.7 77 80-157 269-353 (965)
158 2p8u_A Hydroxymethylglutaryl-C 39.8 46 0.0016 32.7 6.4 44 78-125 236-287 (478)
159 3ven_A O-carbamoyltransferase 39.6 14 0.00047 37.5 2.5 26 83-108 53-78 (576)
160 4ewg_A Beta-ketoacyl synthase; 37.8 17 0.00057 35.0 2.8 46 80-125 279-325 (412)
161 2wya_A Hydroxymethylglutaryl-C 34.9 53 0.0018 32.0 5.9 28 80-107 227-254 (460)
162 2wge_A 3-oxoacyl-[acyl-carrier 32.5 22 0.00075 34.3 2.6 26 81-106 286-311 (416)
163 4gni_A Putative heat shock pro 31.8 77 0.0026 29.9 6.5 50 77-127 322-371 (409)
164 3cqy_A Anhydro-N-acetylmuramic 31.7 42 0.0015 31.8 4.4 53 75-127 67-129 (370)
165 4b9q_A Chaperone protein DNAK; 29.4 62 0.0021 32.8 5.5 49 77-127 311-360 (605)
166 2hg4_A DEBS, 6-deoxyerythronol 29.2 20 0.00067 38.6 1.8 78 80-157 308-394 (917)
167 1dkg_D Molecular chaperone DNA 25.5 85 0.0029 29.3 5.5 47 80-127 314-360 (383)
168 3d2f_A Heat shock protein homo 24.5 58 0.002 33.6 4.3 44 82-127 317-361 (675)
169 3qfu_A 78 kDa glucose-regulate 20.9 1.5E+02 0.005 27.6 6.1 48 79-127 323-371 (394)
No 1
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=100.00 E-value=1.2e-58 Score=453.19 Aligned_cols=321 Identities=16% Similarity=0.231 Sum_probs=258.2
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
..+|.|+|+|+|+++ |+|+|+.+.++. ++ +||.+++||++||++.+++ ++.+|+
T Consensus 13 ~srI~g~g~ylP~~~--v~n~el~~~~~~----~~------e~I~~rtGI~~R~~a~~~e--------------~~~~la 66 (350)
T 4ewp_A 13 ASRIVAVGAYRPANL--VPNEDLIGPIDS----SD------EWIRQRTGIVTRQRATAEE--------------TVPVMA 66 (350)
T ss_dssp EEEEEEEEEECCSCE--EEHHHHTTTTTC----CH------HHHHHHHCCSEEECCCSSC--------------CHHHHH
T ss_pred CCEEEEEEEEcCCCe--EcHHHHHHHhCC----CH------HHHHhccCceEEEEcCCCC--------------CHHHHH
Confidence 468999999999997 999999876532 22 6899999999999987643 267999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
++|+++||+++|++|+|||+||++| ++++..|+.+++|+++||++ ++.+||++ +||+|++.||++|.+++++|+.++
T Consensus 67 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~-~~C~g~~~aL~~A~~~i~~g~~~~ 144 (350)
T 4ewp_A 67 VGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVS-AACAGYCYGVAQADALVRSGTARH 144 (350)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEE-CGGGHHHHHHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEee-cchhhHHHHHHHhhhhhhCCCccc
Confidence 9999999999999999999999997 56788999999999999998 67899999 599999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCee
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVG 241 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (401)
||||++|.+|..+++ .++. +..+|||||+|+||++.+... +....+.+|+..++.+..+...
T Consensus 145 ~Lvv~~E~~s~~~d~-~~~~---~~~lfgDGA~A~vl~~~~~~~---------~~~~~~~sdg~~~~~~~~~~~~----- 206 (350)
T 4ewp_A 145 VLVVGVERLSDVVDP-TDRS---ISFLLGDGAGAVIVAASDEPG---------ISPSVWGSDGERWSTISMTHSQ----- 206 (350)
T ss_dssp EEEEEEEEGGGGCCT-TCTT---TGGGBCEEEEEEEEEEESSCC---------BCCCEEEECGGGTTSEEESSCH-----
T ss_pred eeEeeeeeceecccc-cccc---cccccccchheeeeecccCCC---------ccceeeeecccccceeeecCCc-----
Confidence 999999999998877 5666 678999999999999876541 2233444565555433322110
Q ss_pred eEeccCchHHHHHHHHHHHH----------hhCCCCCchhHHHHHHHHHHhhhc------cCCCcchhhhcceEeecCCC
Q 044359 242 VSISRSLLPVAARALRINIS----------QLGPHVLPYSEQLKYLWSVVCKKS------KTYVPNFKKAFEHFCIHAGG 305 (401)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l------~~l~~~~~~did~~i~Hq~~ 305 (401)
. ..+... ...+.... ....+.|++.++|+++++.+++.+ +++. ++|||+|++||+|
T Consensus 207 ~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~---~~did~~v~Hq~~ 278 (350)
T 4ewp_A 207 L----ELRDAV-EHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREALDAAGVE---PEDLAAFIPHQAN 278 (350)
T ss_dssp H----HHHHHH-HHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHHHHHHTCC---GGGEEEEEECCSC
T ss_pred c----ccCccc-ccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHHHHhhcCC---hhHhceEEecCCC
Confidence 0 000000 00000000 001123556677777777666655 3565 7999999999999
Q ss_pred hHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeee
Q 044359 306 RAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCV 379 (401)
Q Consensus 306 ~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~ 379 (401)
+++++.+++.||+|++|+. +.++++||||+|||+|++|++++++|++++||+|+|++||+|++|++++|||.
T Consensus 279 ~~i~~~~~~~Lgl~~~~~~--~~~l~~~GNtssasi~~~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~vlr~P 350 (350)
T 4ewp_A 279 MRIIDEFAKQLKLPESVVV--ARDIADAGNTSAASIPLAMHRLLEENPELSGGLALQIGFGAGLVYGAQVVRLP 350 (350)
T ss_dssp HHHHHHHHHHTTCCTTSEE--CCTHHHHCBCGGGHHHHHHHHHHHHCGGGTTSEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHHHHHcCcChHhEE--ecccccccchHHHHHHHHHHHHHHhCCCCCcCEEEEEEEchhhEeEEEEEEeC
Confidence 9999999999999999975 35899999999999999999999999999999999999999999999999984
No 2
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=100.00 E-value=2.8e-55 Score=440.81 Aligned_cols=366 Identities=19% Similarity=0.237 Sum_probs=267.8
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccC---CCCCCCh----HHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHE---MQPDVSL----KRS 74 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~---~~~~~~l----~~~ 74 (401)
.+++|.++|+|+|+++ |+|+|+.+.+..... ..+..+++++|++++||++||++.++... ....+++ +.+
T Consensus 30 ~~v~I~gigt~lP~~~--v~n~el~~~~~~~~~-~~~~~~~~~~i~~~tGI~~R~~~~~~~~p~~~~~~~ps~~~r~~~~ 106 (465)
T 3e1h_A 30 LGLSITGLGVQYPPYS--LGPDAIDILSKRYHP-ESPAMKKVLAINRYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVF 106 (465)
T ss_dssp CCEEEEEEEEECCSSC--CBCTHHHHHTCSSSC-CCHHHHHHHHHTTTSCCCCBCCSSCTTCGGGSSSSCCCHHHHHHHH
T ss_pred CCEEEEEEEEECCCcE--EcHHHHHHHHHHhcc-cchhHHHHHHHHHhcCCceEEEeecccCcccccccCCCHHHHHHHH
Confidence 4799999999999997 999999887654321 12234556679999999999998653211 1112333 456
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 75 REETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 75 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
.+.+.+|+.+|+++||+++|++++|||+||++|++++..|+.+++|+++||+++.+.+|||.+++|+|++.||.+|.++|
T Consensus 107 ~~~a~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i 186 (465)
T 3e1h_A 107 MSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLC 186 (465)
T ss_dssp HHHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Confidence 67789999999999999999999999999999866888999999999999998545589994369999999999999999
Q ss_pred Hc----CCCCeEEEEeeccccCCCCCC--------CCcchhhhhhcccccceEEEEecCCCCc--cccceEEeeeeeecc
Q 044359 155 KV----HKNSLALVLSMEAISSNGYTG--------STKSMLISNTVFRMGGAAILLSNRQQDK--HIAKYKLKHLVRTHM 220 (401)
Q Consensus 155 ~~----g~~~~vLvv~~e~~s~~~~~~--------~d~~~~i~~~lfGDGAaA~ll~~~~~~~--~~~~~~l~~~~~~~~ 220 (401)
++ |..++||||++|++|..+++. .|+. +..+|||||+|+||++++... +...|++++......
T Consensus 187 ~a~~~~G~~~~vLVvg~E~~S~~~~~~~~~~~~~~~d~~---t~~LFGDGAaAvVl~~~~~~~~~~~~~~~l~~~~~~~~ 263 (465)
T 3e1h_A 187 LGHTARGKPARILVLALEVSTTMVRSELESIDALQETRI---GIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVI 263 (465)
T ss_dssp HHHHHTTCCCEEEEEEEECCGGGHHHHHHHHHHHTCCCC---HHHHBCCEEEEEEEECCTTCCTTCCCSEEEEEEEEEEC
T ss_pred hcccccCCCCEEEEEEEeecchhcCcccccccccccccc---cccccccceeEEEEEccCCCccccccceeeccceEEEe
Confidence 97 889999999999999887531 2333 789999999999999875421 223466654322222
Q ss_pred cCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcce
Q 044359 221 GYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEH 298 (401)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~ 298 (401)
+++.. .+.+.....+ ..+...++++..+.+.+...++.+ ++.. .+.| +++. .+||||
T Consensus 264 -p~~~~--~~~~~~~~~g-~~~~~g~~V~~~a~~~v~~~i~~~-------L~~~-------g~~L~~agl~---~~DId~ 322 (465)
T 3e1h_A 264 -PDSEH--DLGFDVDPMG-WKVVLSPRVPVLAKASLQPTYADL-------LSSL-------QDQLPSSYQK---PADFDW 322 (465)
T ss_dssp -TTCTT--TEEEEEETTE-EEEEECTTHHHHHHHHHHHHHHHH-------HHHH-------GGGSCTTSCS---GGGSEE
T ss_pred -cCCcc--ccCccccCCC-ceEecChHHHHHHHHHHHHHHHHH-------HHhc-------cccccccCCC---HHHceE
Confidence 22211 1111111111 234566777776655554443322 1111 0112 2344 789997
Q ss_pred EeecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHc--CCCCCC----CeEEEEeeccchhhc
Q 044359 299 FCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAK--GKVKKG----DRVWQIAFGSGFKVN 372 (401)
Q Consensus 299 ~i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~--g~l~~G----d~vll~~~G~G~s~~ 372 (401)
| +||+|++|++.++++|||+++|+..++.++++||||+|||+|++|++++++ |++++| |+++|++||+|++|+
T Consensus 323 ~-~Hqan~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~~~~~~g~l~~Gg~~~d~vll~gfG~Glt~~ 401 (465)
T 3e1h_A 323 A-MHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCAFGPGINVE 401 (465)
T ss_dssp E-ECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSTTTTSCSSSSCCCSEEEEEEEETTTEEE
T ss_pred E-ecCCChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHHHHhcccccCCCCCCCCEEEEEEEhHHHhhh
Confidence 6 999999999999999999999998888899999999999999999999988 789988 999999999999999
Q ss_pred ceeeeeeccCCcCCCCCcccccccCCCC
Q 044359 373 SAVWKCVSNLDPKERNAWSDRIHLYPVD 400 (401)
Q Consensus 373 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 400 (401)
+++|||...... .+.|.+| |||+
T Consensus 402 ~~llr~~~~~~~--~~~~~~~---~~~~ 424 (465)
T 3e1h_A 402 MCMLKRRMNAPA--RTTTGLD---TPPE 424 (465)
T ss_dssp EEEEEECCC-------------------
T ss_pred heeeEEeccccC--CCCCCCC---CCCC
Confidence 999999887655 7899999 9875
No 3
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=100.00 E-value=1.8e-55 Score=432.44 Aligned_cols=331 Identities=16% Similarity=0.256 Sum_probs=259.8
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEE 80 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~ 80 (401)
|++++|.++|+|+|+++ |+|+|+.+.++. .+. +||++++||++||++.+++ ++.+
T Consensus 28 ~~~v~I~gig~~lP~~~--v~n~~l~~~~~~---~~~------~~i~~~tGI~~R~~a~~~~--------------~~~~ 82 (365)
T 3gwa_A 28 PPRAAIADIAGHLPEQV--LTNDVLAQLYPD---WPA------EKILAKTGIRERRIAAPRE--------------TAAD 82 (365)
T ss_dssp -CEEEEEEEEEECCSEE--EEHHHHHHHCTT---CCH------HHHHHHHCCCEEEECCTTC--------------CHHH
T ss_pred eccEEEEEEEEeCCCcE--EcHHHHHHHccC---CCH------HHHHHhcCccEEEECCCCC--------------CHHH
Confidence 46899999999999996 999999987521 222 6899999999999987643 2679
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKN 159 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~ 159 (401)
|+.+|+++||+++|++++|||.||+++ ++++..|+.+.+++.+||+++++++++++ ++|+|++.||.+|.++|++|..
T Consensus 83 La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~-~~C~s~~~Al~~A~~~i~~g~~ 161 (365)
T 3gwa_A 83 LAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVN-LGCSGYVYGLSLAKGLVETGAA 161 (365)
T ss_dssp HHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEE-CSTTHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEEec-ccChHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999987 46788899999999999998779999999 6999999999999999999999
Q ss_pred CeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCC
Q 044359 160 SLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGN 239 (401)
Q Consensus 160 ~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 239 (401)
++||||++|.+|..+++ .|+. +..+|||||+|+||++++.... ++..+.+.++++.++.+..+.++..
T Consensus 162 ~~vLvvg~e~~s~~~~~-~dr~---~~~lfGDGAaA~vl~~~~~~~~-------~i~~~~~~s~g~~~~~~~~~~gg~~- 229 (365)
T 3gwa_A 162 RCVLLLTADTYSKYLHP-LDKS---VRTLFGDGASATAVIAEHGELE-------RIGPFVFGTDGRGAPNLIVKAGLFR- 229 (365)
T ss_dssp SEEEEEEEECGGGGSCT-TCHH---HHTTBCCEEEEEEEEEECSSSC-------SEEEEEEEECGGGGGGEEECSSSSS-
T ss_pred CEEEEEEEchhhccCCc-cccc---ccccccceeEEEEEEecCCCCC-------ceEEEEEEEcCCCCCeEEecCCCcC-
Confidence 99999999999998876 5665 5789999999999998765310 1234455567666665544332111
Q ss_pred eeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc------cCCCcchhhhcceEeecCCChHHHHHHH
Q 044359 240 VGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS------KTYVPNFKKAFEHFCIHAGGRAIIDAVE 313 (401)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~l~~~~~~did~~i~Hq~~~~~~~~~~ 313 (401)
.+...+..... .......+....+.|++.++|+++++.+++.+ .++. .+|||+|++||+|+++++.++
T Consensus 230 --~p~~~~~~~~~-~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~---~~did~~v~Hq~n~~i~~~~~ 303 (365)
T 3gwa_A 230 --EPKSADSAREH-EDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAGEP---RENIDCFVLHQANRFMLDALR 303 (365)
T ss_dssp --SCCCTGGGCCE-ECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHHHHTCC---GGGCSEEEECCCCHHHHHHHH
T ss_pred --CCCcccccccc-cccccccccccceEeccHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEEcCCCHHHHHHHH
Confidence 00000000000 00000000001122344555656655555544 3565 799999999999999999999
Q ss_pred HHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeee
Q 044359 314 ENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 314 ~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
++||+|+||+. .++++||||+|||+|++|++++++|++++||+|+|++||+|++|++++|||
T Consensus 304 ~~Lgl~~ek~~---~~l~~~GNtssAsipl~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~ll~~ 365 (365)
T 3gwa_A 304 KKMKIPEHKFP---VLMEHCGNTVSSTLPLALETMRANGTLARGMRLMLLGFGVGYSWAGCLVNF 365 (365)
T ss_dssp HHHTCCGGGSC---CCCTTTCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHhCCCHHHHH---HHHhcccchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEEEEEC
Confidence 99999999994 789999999999999999999999999999999999999999999999998
No 4
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=100.00 E-value=5.1e-55 Score=422.34 Aligned_cols=316 Identities=18% Similarity=0.252 Sum_probs=260.8
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
++++|.++|+|+|+++ |+|+|+.+.++. ++ +|+.+++||++||++.+++ +.+|
T Consensus 3 ~~~~I~~~g~~lP~~~--v~n~~~~~~~~~----~~------~~i~~~~Gi~~R~~a~~~e---------------~~~L 55 (321)
T 3il6_A 3 NYARISCTSRYVPENC--VTNHQLSEMMDT----SA------AWIHSRTGISERRIVTQEN---------------TSDL 55 (321)
T ss_dssp CEEEEEEEEEECCSCE--EEHHHHHHHTTS----CH------HHHHHHHSCSEEECCSSCC---------------HHHH
T ss_pred CcEEEEEEEEECCCcE--EcHHHHHHHhCC----Ch------hhhhhhcCceEEEECCCCC---------------HHHH
Confidence 4689999999999996 999999987542 22 5889999999999987631 5799
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNS 160 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~ 160 (401)
+.+|+++||+++|++++|||.||++| ++++..|+.+.+++++||++ ++++++++ ++|+|++.||.+|.++|++|..+
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~-~aC~s~~~al~~A~~~i~~g~~~ 133 (321)
T 3il6_A 56 CHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGAT-EAFAFDIS-AACSGFVYALSMAEKLVLSGRYQ 133 (321)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCT-TCEEEEEC-CGGGHHHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCC-CceEEEeC-cccHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999999997 46888999999999999998 49999999 69999999999999999999999
Q ss_pred eEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCe
Q 044359 161 LALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNV 240 (401)
Q Consensus 161 ~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 240 (401)
+||||++|.+|..+++ .|+. +..+|||||+|+||++.+.. +++.+++.++++.++.+..+.++..
T Consensus 134 ~vLvvg~e~~s~~~~~-~dr~---~~~lfGDGA~A~vl~~~~~~---------~i~~~~~~s~~~~~~~~~~~~~~~~-- 198 (321)
T 3il6_A 134 TGLVIGGETFSKMLDW-TDRS---TAVLFGDGAAGVLIEAAETP---------HFLNEKLQADGQRWTALTSGYTINE-- 198 (321)
T ss_dssp CEEEEEEECGGGGSCT-TCTT---TGGGBCCEEEEEEEEEESSC---------CEEEEEEEECGGGGGGEECCCCCCC--
T ss_pred EEEEEEEccccccCCc-cccc---cceeeccccEEEEEEEcCCC---------CEEEEEEEEcCCCCCeEEeCCCCCC--
Confidence 9999999999998876 6665 67899999999999987643 1234555667766665554432110
Q ss_pred eeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHHHHHHcCCCc
Q 044359 241 GVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSK 320 (401)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi~~ 320 (401)
.+...+.. . ....+.|++.+.++++++.+++.++++.. .+|||+|++||+|+++++.+++.||+|+
T Consensus 199 -~~~~~~~~-~----------~~~~~~~~g~~v~~~~~~~~~~~i~~~l~--~~did~~v~Hq~~~~i~~~~~~~lgl~~ 264 (321)
T 3il6_A 199 -SPFYQGHK-Q----------ASKTLQMEGRSIFDFAIKDVSQNILSLVT--DETVDYLLLHQANVRIIDKIARKTKISR 264 (321)
T ss_dssp -STTCCCCC-C----------CCCSCEECHHHHHHHHHHHHHHHHHTTCC--GGGCSEEEECCSCHHHHHHHHHHHTCCG
T ss_pred -CCCCcccc-c----------cccceeechHHHHHHHHHHHHHHHHHHcC--cccCCEEEEcCCCHHHHHHHHHHcCcCH
Confidence 00110000 0 00112345566777788888877755442 7899999999999999999999999999
Q ss_pred hhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCC--CeEEEEeeccchhhcceeeee
Q 044359 321 EDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKG--DRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 321 e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~G--d~vll~~~G~G~s~~~~~l~~ 378 (401)
+|+. .++++||||+|||+|++|++++++|++++| |+|++++||+|++|++++||+
T Consensus 265 ek~~---~~l~~~GNt~sasi~~~L~~~~~~g~~~~G~~d~vll~~fG~G~t~~~~~l~v 321 (321)
T 3il6_A 265 EKFL---TNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL 321 (321)
T ss_dssp GGBC---CCGGGTCBCGGGHHHHHHHHHHHTTSSCTTSCCEEEEEEEETTTEEEEEEEEC
T ss_pred HHhh---hhHhhcccHHHHHHHHHHHHHHHhCCCCCCCCCEEEEEEEehhheeEEEEEEC
Confidence 9994 689999999999999999999999999999 999999999999999999984
No 5
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=100.00 E-value=2.1e-54 Score=426.59 Aligned_cols=349 Identities=19% Similarity=0.241 Sum_probs=268.3
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccC---CCCCCCh----HHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHE---MQPDVSL----KRSR 75 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~---~~~~~~l----~~~~ 75 (401)
+++|.|+|+|+|+++ |+|+|+.+.+..... ..+..+++++|++++||++||++.+...+ ....+++ +.+.
T Consensus 2 ~v~I~~ig~~~P~~~--v~~~e~~~~~~~~~~-~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~s~~~r~~~~~ 78 (379)
T 3euo_A 2 GLSITGLGVQYPPYS--LGPDAIDILSKRYHP-ESPAMKKVLAINRYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFM 78 (379)
T ss_dssp CCEEEEEEEECCSEE--ECTHHHHHHHHHHCC-CCHHHHHHHHHTTSSCCCCEEESSCTTCGGGSSSSCCCHHHHHHHHH
T ss_pred ceEEEEEEeeCCCce--eCHHHHHHHHHHhcc-cchhHHHHHHHHHhCCcceeeeeecCcCcccccccCCCHHHHHHHHH
Confidence 589999999999997 999999887765421 22334556789999999999998432211 1112333 4567
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 76 EETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
+.+.+|+.+|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++.+.++++.+++|+|++.||.+|.++|+
T Consensus 79 ~~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 158 (379)
T 3euo_A 79 SDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGASGGLAALRTAANLCL 158 (379)
T ss_dssp HHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCCCCCeeEEEeeCchhhHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999998668889999999999999985555899943699999999999999999
Q ss_pred c----CCCCeEEEEeeccccCCCCCC--------CCcchhhhhhcccccceEEEEecCCCCc--cccceEEeeeeeeccc
Q 044359 156 V----HKNSLALVLSMEAISSNGYTG--------STKSMLISNTVFRMGGAAILLSNRQQDK--HIAKYKLKHLVRTHMG 221 (401)
Q Consensus 156 ~----g~~~~vLvv~~e~~s~~~~~~--------~d~~~~i~~~lfGDGAaA~ll~~~~~~~--~~~~~~l~~~~~~~~~ 221 (401)
+ |..++||||++|.+|..+++. .|+ ++..+|||||+|+||++++... +.+.+++++......
T Consensus 159 a~~~~G~~~~vLvv~~E~~s~~~~~~~~~~~~~~~d~---~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~~- 234 (379)
T 3euo_A 159 GHTARGKPARILVLALEVSTTMVRSELESIDALQETR---IGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVI- 234 (379)
T ss_dssp HHHHTTCCCEEEEEEEECCGGGHHHHHHHHHHHCCCC---CHHHHBCCEEEEEEEECCTTCCTTCCCSEEEEEEEEEEC-
T ss_pred hccccCCCCEEEEEEEEeehhhhcCccccccccHHHh---hcceeecCccEEEEEecCCCCccccccceeeeceeEEEe-
Confidence 8 889999999999999887631 233 3789999999999999876431 223566665332222
Q ss_pred CCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcceE
Q 044359 222 YDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEHF 299 (401)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~~ 299 (401)
+++. +.+.+..+..| ..+.+.++++..+.+.+...++.+ ++.. .+.| +++. .+||||+
T Consensus 235 p~~~--~~~~~~~~~~g-~~~~~~~~v~~~~~~~~~~~i~~~-------L~~~-------~~~l~~~gl~---~~did~~ 294 (379)
T 3euo_A 235 PDSE--HDLGFDVDPMG-WKVVLSPRVPVLAKASLQPTYADL-------LSSL-------QDQLPSSYQK---PADFDWA 294 (379)
T ss_dssp TTCG--GGEEEEEETTE-EEEEECTTHHHHHHHHHHHHHHHH-------HHHH-------GGGSCTTSCS---GGGSEEE
T ss_pred cCch--hhcCceecCCC-cEEEeChHHHHHHHHHHHHHHHHH-------HHhc-------CcccccccCC---hhHeeEE
Confidence 2222 11111111122 234567788777666555444432 1111 0111 2444 7899966
Q ss_pred eecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcC--CCCCC----CeEEEEeeccchhhcc
Q 044359 300 CIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKG--KVKKG----DRVWQIAFGSGFKVNS 373 (401)
Q Consensus 300 i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g--~l~~G----d~vll~~~G~G~s~~~ 373 (401)
+||+|+++++.++++||++++|+..|+.++++||||+|||+|++|++++++| ++++| |+++|++||+|++|++
T Consensus 295 -~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~l~~Gg~~~d~vll~~fG~G~t~~~ 373 (379)
T 3euo_A 295 -MHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCAFGPGINVEM 373 (379)
T ss_dssp -ECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSHHHHTTCGGGCCCSEEEEEEEETTTEEEE
T ss_pred -eCCCChHHHHHHHHHhCCCHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhhcccccCCCCCCCCeEEEEEECcccEeEE
Confidence 9999999999999999999999988888999999999999999999999887 88888 9999999999999999
Q ss_pred eeeeee
Q 044359 374 AVWKCV 379 (401)
Q Consensus 374 ~~l~~~ 379 (401)
++|||.
T Consensus 374 ~ll~~~ 379 (379)
T 3euo_A 374 CMLKRR 379 (379)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 999984
No 6
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=100.00 E-value=2e-55 Score=430.60 Aligned_cols=326 Identities=15% Similarity=0.166 Sum_probs=261.3
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
++++|.++|+|+|++. |+|+|+.+.++ ..+ .+|+.+++||++||++.++. ++.+|
T Consensus 15 ~~v~I~~ig~~lP~~~--v~n~~l~~~~~------~~~---~~~i~~~tGI~~R~~a~~~~--------------~~~~L 69 (354)
T 4efi_A 15 QGARIAGVVSCVPSKQ--VDNDYFVERFD------ASA---VRDVVKMIGVNRRRWADAQT--------------SAGDL 69 (354)
T ss_dssp ESEEEEEEEEEECSCE--EEGGGGTTTSC------HHH---HHHHHHHHCCSEEECCCTTC--------------CHHHH
T ss_pred cceEEEEEEEECCCcE--EcHHHHHHHhC------CCc---HHHHHHhcCCeEEEEcCCCC--------------CHHHH
Confidence 4799999999999997 99999998542 111 36899999999999987643 26799
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNS 160 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~ 160 (401)
+.+|+++||+++|++++|||+||++| ++++..|+.+.+++++||+++++++++++ ++|+|++.||..|.++|++|..+
T Consensus 70 a~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~-~aC~s~~~al~~A~~~i~~g~~~ 148 (354)
T 4efi_A 70 CRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCLALDIN-LGCSGYPQALWLGMNLIQTGAAK 148 (354)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSEEEEEC-CCTTHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCccEEeeC-cccHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999999997 46788999999999999996589999998 69999999999999999999999
Q ss_pred eEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCe
Q 044359 161 LALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNV 240 (401)
Q Consensus 161 ~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 240 (401)
+|||+++|.+|..+++ .|+. +..+|||||+|+||++++... .+...+.++++.++.++.+.++..
T Consensus 149 ~vLvvg~e~~s~~~~~-~d~~---~~~lfGDGA~A~vl~~~~~~~---------~~~~~~~s~g~~~~~~~~~~~g~~-- 213 (354)
T 4efi_A 149 RVLLAVGDTISKMIDP-TDRS---TSLLFGDAGTMTALETSNGDA---------AAHFIIGADGKGARNLIVPSGGFK-- 213 (354)
T ss_dssp EEEEEEEECGGGGCCT-TCHH---HHTTBCCEEEEEEEEECCSCC---------EEEEEEEECGGGGGGEECCSSSSS--
T ss_pred EEEEEEechhcccCCc-cccc---cccccccceeEEEEeecCCCC---------ceEEEEEEcCCCcceEEecCCCCC--
Confidence 9999999999998876 5665 678999999999999876531 113445566666665555432110
Q ss_pred eeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc------cCCCcchhhhcceEeecCCChHHHHHHHH
Q 044359 241 GVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS------KTYVPNFKKAFEHFCIHAGGRAIIDAVEE 314 (401)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~l~~~~~~did~~i~Hq~~~~~~~~~~~ 314 (401)
+...+... . ...+....+.|++.+.|+++++.+++.+ .++. ++|||+|++||+|+++++.+++
T Consensus 214 --p~~~~~~~-~-----~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~---~~did~~v~Hq~~~~i~~~~~~ 282 (354)
T 4efi_A 214 --PYDAAADE-R-----MAGKSPECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRD---KDSYDAFLFHQANLFMLKHLAK 282 (354)
T ss_dssp --CCCGGGCG-G-----GTTCCTTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCC---GGGCSEEEECCCCHHHHHHHHH
T ss_pred --CCcccccc-c-----cccccccceEEccHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEeCCCCHHHHHHHHH
Confidence 11110000 0 0000011223444556666655555554 3565 7999999999999999999999
Q ss_pred HcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccC
Q 044359 315 NLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNL 382 (401)
Q Consensus 315 ~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~ 382 (401)
+||+|++|+. .++++||||+|||+|++|++++++|++++||+|+|++||+|++|++++|||...+
T Consensus 283 ~Lgl~~ek~~---~~l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~ll~~~~~~ 347 (354)
T 4efi_A 283 KAGLPAERVP---VNIGEYGNTSCASIPLLITTELKDRLKEETLQLGMFGFGVGYSWASAALAVGPLN 347 (354)
T ss_dssp HTTCCGGGSC---CCHHHHCBCGGGHHHHHHHHHSHHHHHHSCEEEEEEEEETTTEEEEEEEEECCCS
T ss_pred HhCcCHHHHH---HHHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheeeEEEECCcc
Confidence 9999999994 6899999999999999999999999999999999999999999999999997654
No 7
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=100.00 E-value=1.3e-54 Score=419.69 Aligned_cols=308 Identities=18% Similarity=0.275 Sum_probs=250.3
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
|-+|+++|+|+|+++ |+|+|+.+.++ .++ +|+.+++||++||++.+++ ++.+|+
T Consensus 9 ~~~~~~~g~ylP~~~--v~n~~l~~~~~----~~~------~~i~~~tGi~~R~~a~~~~--------------~~~~La 62 (323)
T 3il3_A 9 NSRILSTGSYLPSHI--RTNADLEKMVD----TSD------EWIVTRSGIRERRIAAEDE--------------TVATMG 62 (323)
T ss_dssp EECCCEEEEECCSCE--EEHHHHHTTSS----CCH------HHHHHHTCCCEEECCCTTC--------------CHHHHH
T ss_pred cCceeEEEEECCCce--EcHHHHHHHhC----CCH------HHHHHhcCCcEEEECCCCC--------------CHHHHH
Confidence 568999999999997 99999998643 222 5888999999999987643 267999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
.+|+++||+++|++++|||.||++| ++++..|+.+.+++.+||++ ++++++++ ++|+|++.||.+|.++|++|..++
T Consensus 63 ~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 140 (323)
T 3il3_A 63 FEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNID-DAISFDLA-AACTGFVYALSVADQFIRAGKVKK 140 (323)
T ss_dssp HHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCS-SCEEEEEC-CGGGHHHHHHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCC-CccEEEEC-CccHHHHHHHHHHHHHHHCCCCCE
Confidence 9999999999999999999999997 46777899999999999997 79999999 699999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCee
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVG 241 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (401)
||||++|.+|..+++ .|+. +..+|||||+|+||++++.. +++.+.+.+++++++.+..+ +...
T Consensus 141 vLvvg~e~~s~~~~~-~d~~---~~~lfGDGA~A~vl~~~~~~---------~i~~~~~~s~g~~~~~~~~~-g~~~--- 203 (323)
T 3il3_A 141 ALVIGSDLNSRKLDE-TDRS---TVVLFGDGAGAVILEASEQE---------GIISTHLHASADKNNALVLA-QPER--- 203 (323)
T ss_dssp EEEEEEEEGGGSCCT-TCTT---TTTTBCEEEEEEEEEEESSC---------CEEEEEEEECCCCSCSEECC-CCCT---
T ss_pred EEEEEeeccccccCc-cccc---cccccccceEEEEEEEcCCC---------CeEEEEEEEcCCCcceEEEC-CCCC---
Confidence 999999999998876 5665 67899999999999987632 23344455666666554433 1100
Q ss_pred eEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc------cCCCcchhhhcceEeecCCChHHHHHHHHH
Q 044359 242 VSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS------KTYVPNFKKAFEHFCIHAGGRAIIDAVEEN 315 (401)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~l~~~~~~did~~i~Hq~~~~~~~~~~~~ 315 (401)
+.. ....+.|++.+.++++++.+++.+ .++. .+|||+|++||+|+++++.+.+.
T Consensus 204 -~~~----------------~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~---~~did~~v~Hq~~~~i~~~~~~~ 263 (323)
T 3il3_A 204 -GIE----------------KSGYIEMQGNETFKLAVRELSNVVEETLLANNLD---KKDLDWLVPHQANLRIITATAKK 263 (323)
T ss_dssp -TCS----------------SCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCC---TTTCCEEEECCSCHHHHHHHHHH
T ss_pred -CCC----------------CCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEEcCCCHHHHHHHHHH
Confidence 000 000011222333334433333333 3555 79999999999999999999999
Q ss_pred cCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeee
Q 044359 316 LKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 316 lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
||+|++|+. .++++||||+|||+|++|++++++|++++||+|+|++||+|++|+++++||
T Consensus 264 lgl~~ek~~---~~l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~~l~~ 323 (323)
T 3il3_A 264 LEMDMSQVV---VTLDKYANNSAATVPVALDEAIRDGRIQRGQLLLLEAFGGGWTWGSALVRF 323 (323)
T ss_dssp TTCCGGGBC---CCHHHHCBCGGGHHHHHHHHHHHTTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred cCcCHHHhh---ccHhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEEEEEC
Confidence 999999994 689999999999999999999999999999999999999999999999997
No 8
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=100.00 E-value=2.1e-53 Score=421.15 Aligned_cols=349 Identities=16% Similarity=0.186 Sum_probs=260.4
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCCh--hhHHHHHHHHHHcCCCCceecCCCcc-------CCCCCCC--
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDK--ESLDFQEKVLEKSGIGDESCIPLNLH-------EMQPDVS-- 70 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~--~~~~~~~~i~~~~GI~~R~~~~~~~~-------~~~~~~~-- 70 (401)
.+++|.|+|+|+|+++ |+|+|+.+.+......++ +..+++++|++++||++||++.++.. .....++
T Consensus 15 ~~~~I~~ig~~~P~~~--v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~~p~~~ 92 (393)
T 3ov2_A 15 GPATIMAIGTATPPNL--YEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKTMVKKRYLHLTEEILKERPKLCSYKEASFD 92 (393)
T ss_dssp SCCEEEEEEEECCSCE--EEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHSGGGGSSSSCCHH
T ss_pred CCeEEEEEEeeCCCcc--cCHHHHHHHHHHhhcccchHHHHHHHHHHHHhcCCceEEeecChhhhccCcccccCCCCCHH
Confidence 4689999999999997 999999998653321221 22456778999999999999876320 0001122
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcc-eEEeecccchhHHHHH
Q 044359 71 --LKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIK-SINLSGMGCSAGILSI 147 (401)
Q Consensus 71 --l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~-~~~i~~~gC~~~~~aL 147 (401)
++.+.+++.+|+.+|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++.+. +++++ ++|+|++.||
T Consensus 93 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~v~-~~C~g~~~al 171 (393)
T 3ov2_A 93 DRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYS-QACHMGAAML 171 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEEEES-CCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcceeeEEc-CccHHHHHHH
Confidence 3557788999999999999999999999999999998655778999999999999985443 89999 6999999999
Q ss_pred HHHHHHHHcCCCCeEEEEeeccccC-CCCCCCCc--chhhhhhcccccceEEEEecCCCCc-cccceEEeeeeeecccCC
Q 044359 148 SLVKDLLKVHKNSLALVLSMEAISS-NGYTGSTK--SMLISNTVFRMGGAAILLSNRQQDK-HIAKYKLKHLVRTHMGYD 223 (401)
Q Consensus 148 ~~A~~~i~~g~~~~vLvv~~e~~s~-~~~~~~d~--~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~~l~~~~~~~~~~~ 223 (401)
.+|.++|++|+.++||||++|.+|. ..++ .|+ +++.+..+|||||+|+||++++... ..+.|++...-+..+ +.
T Consensus 172 ~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~-~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~~-p~ 249 (393)
T 3ov2_A 172 RIAKDLAENNRGARVLVVACEITVLSFRGP-NEGDFEALAGQAGFGDGAGAVVVGADPLEGIEKPIYEIAAAMQETV-AE 249 (393)
T ss_dssp HHHHHHHHHSTTCEEEEEEEECGGGTCCCC-CTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCSEEEEEEEEEEC-TT
T ss_pred HHHHHHHHcCCCCEEEEEEEeccchhccCC-cccchhhhcccccccCccEEEEEEecCCCcccCceeEEEecCcEEe-cC
Confidence 9999999999999999999999985 4444 333 3455789999999999999876431 112355443211111 11
Q ss_pred ccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecC
Q 044359 224 DQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHA 303 (401)
Q Consensus 224 ~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq 303 (401)
+.. .+.+.... ....+.+.++++....+.+...++.+ ++. .|+.. .+|+ +|++||
T Consensus 250 ~~~--~~~~~~~~-~g~~~~~~~~v~~~~~~~~~~~i~~~-------L~~------------~gl~~--~~di-~~v~Hq 304 (393)
T 3ov2_A 250 SQG--AVGGHLRA-FGWTFYFLNQLPAIIADNLGRSLERA-------LAP------------LGVRE--WNDV-FWVAHP 304 (393)
T ss_dssp CTT--SEEEEEET-TEEEEEECTTHHHHHHTTSHHHHHHH-------HGG------------GTCCS--GGGS-EEEECC
T ss_pred Ccc--cCceeeeC-CceEEEECcHHHHHHHHHHHHHHHHH-------HHH------------cCCCc--ccCc-EEEECC
Confidence 111 01000000 11234555555554433222222211 111 24541 2778 999999
Q ss_pred CChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHc----CCCCCC---CeEEEEeeccchhhcceee
Q 044359 304 GGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAK----GKVKKG---DRVWQIAFGSGFKVNSAVW 376 (401)
Q Consensus 304 ~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~----g~l~~G---d~vll~~~G~G~s~~~~~l 376 (401)
+|+++++.++++||++++|+..++.++++||||+|||+|++|++++++ |++++| |+++|++||+|++|++++|
T Consensus 305 ~n~~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~fG~G~t~~~~ll 384 (393)
T 3ov2_A 305 GNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVL 384 (393)
T ss_dssp CCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEE
T ss_pred CChHHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEEECccceeeeeee
Confidence 999999999999999999998777789999999999999999999976 999999 9999999999999999999
Q ss_pred eeec
Q 044359 377 KCVS 380 (401)
Q Consensus 377 ~~~~ 380 (401)
||..
T Consensus 385 ~~~~ 388 (393)
T 3ov2_A 385 RSMP 388 (393)
T ss_dssp EECB
T ss_pred EEcc
Confidence 9975
No 9
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=100.00 E-value=2.8e-53 Score=419.54 Aligned_cols=349 Identities=16% Similarity=0.221 Sum_probs=256.9
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCCh--hhHHHHHHHHHHcCCCCceecCCCcc-------CCCCCCC--
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDK--ESLDFQEKVLEKSGIGDESCIPLNLH-------EMQPDVS-- 70 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~--~~~~~~~~i~~~~GI~~R~~~~~~~~-------~~~~~~~-- 70 (401)
.+++|.|+|+|+|+++ |+|+|+.+.+......++ ...++++||++++||++||++.+++. .....++
T Consensus 9 ~~~~I~~ig~~~P~~~--v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~~p~~~ 86 (387)
T 3oit_A 9 GLAAVLAIGTANPPNC--VTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEMLSAHPEFVDRDAPSLD 86 (387)
T ss_dssp SCCEEEEEEEECCSEE--EETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTSSCCEEEESCCHHHHHHCGGGTCTTSCCHH
T ss_pred CCeEEEEEEeeCCCce--ecHHHHHHHHHHHhCccchHHHHHHHHHHHHhcCcceeeeecCHHHhccCccccccCCCCHH
Confidence 4689999999999997 999999998753321221 22356679999999999999876320 0001123
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcc-eEEeecccchhHHHHH
Q 044359 71 --LKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIK-SINLSGMGCSAGILSI 147 (401)
Q Consensus 71 --l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~-~~~i~~~gC~~~~~aL 147 (401)
++.+.+.+.+|+.+|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++.+. +++++ ++|+|++.||
T Consensus 87 ~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~~~-~~C~~~~~al 165 (387)
T 3oit_A 87 ARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGCAAL 165 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEEEC-CGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcceeeEEC-chhHHHHHHH
Confidence 3456678999999999999999999999999999998655778999999999999985553 89999 6999999999
Q ss_pred HHHHHHHHcCCCCeEEEEeeccccCCC-CCCCCc--chhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCc
Q 044359 148 SLVKDLLKVHKNSLALVLSMEAISSNG-YTGSTK--SMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDD 224 (401)
Q Consensus 148 ~~A~~~i~~g~~~~vLvv~~e~~s~~~-~~~~d~--~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~ 224 (401)
.+|.++|++|+.++||||++|.+|..+ ++ .|+ +++++..+|||||+|+||++++.....+.|++.+..+... +++
T Consensus 166 ~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~-~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~-p~~ 243 (387)
T 3oit_A 166 RLAKDLAENSRGARVLVVAAELTLMYFTGP-DEGCFRTLLVQGLFGDGAAAVIVGADADDVERPLFEIVSAAQTII-PES 243 (387)
T ss_dssp HHHHHHHHSSTTCEEEEEEEECGGGTCCCC-CSSSCHHHHHHHHBCCEEEEEEEESSCCSSCCCCEEEEEEEEEEC-TTC
T ss_pred HHHHHHHhcCCCCEEEEEEEeccchhccCc-cccchHhhhcccccccceEEEEEecCCCcccCCceEEEecccEEe-CCC
Confidence 999999999999999999999998443 43 343 3456789999999999999876321123466554322222 221
Q ss_pred cccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcc--eEeec
Q 044359 225 QAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFE--HFCIH 302 (401)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did--~~i~H 302 (401)
.. .+.+.....| ..+.+.+++|..+.+.+...++.+ ++.... -.++ .|+| +|++|
T Consensus 244 ~~--~~~~~~~~~g-~~~~~~~~v~~~~~~~~~~~~~~~-------L~~~~~--------~~gl-----~d~d~~~~v~H 300 (387)
T 3oit_A 244 DH--ALNMRFTERR-LDGVLGRQVPGLIGDNVERCLLDM-------FGPLLG--------GDGG-----GGWNDLFWAVH 300 (387)
T ss_dssp TT--SEEEEECSSS-EEEEECTTHHHHHHHHHHHHHHHH-------TGGGCC-------------------GGGSEEEEC
T ss_pred hh--hccceeecCC-eEEEECcHHHHHHHHHHHHHHHHH-------HHhhcc--------cCCC-----CcccccEEEEC
Confidence 11 1111111112 346677888877666555444432 111100 0022 2455 99999
Q ss_pred CCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCC------CeEEEEeeccchhhcceee
Q 044359 303 AGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKG------DRVWQIAFGSGFKVNSAVW 376 (401)
Q Consensus 303 q~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~G------d~vll~~~G~G~s~~~~~l 376 (401)
|+|+++++.++++||++++|+..++.++++||||+|||+|++|++++++ ++++| |++++++||+|++|++++|
T Consensus 301 q~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~-~~~~G~~g~~~d~vll~~fG~G~t~~~~ll 379 (387)
T 3oit_A 301 PGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQ-RKEAAAAGEWPELGVMMAFGPGMTVDAMLL 379 (387)
T ss_dssp CCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHC-----------CCEEEEEEEETTTEEEEEEE
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHHHHh-hhccCCCCCCCCEEEEEEecccceeeeeee
Confidence 9999999999999999999998777789999999999999999998876 78888 8999999999999999999
Q ss_pred eee
Q 044359 377 KCV 379 (401)
Q Consensus 377 ~~~ 379 (401)
|+.
T Consensus 380 ~~~ 382 (387)
T 3oit_A 380 HAT 382 (387)
T ss_dssp EEC
T ss_pred Eec
Confidence 985
No 10
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=100.00 E-value=1.7e-53 Score=413.88 Aligned_cols=316 Identities=18% Similarity=0.261 Sum_probs=250.8
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
+++|.++|+|+|++. ++|+|+.+.+...+ .+.. .+|+.+++||++||++.+++ ++.+|+
T Consensus 11 ~v~I~g~g~~lP~~~--v~~~~l~~~l~~~~-~~~~----~~~i~~rtgi~~r~~~~~~~--------------~~~~la 69 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNR--VTNQDLAKRLAEQG-IETS----DEWIVARTGIHARYFAEPDV--------------TTSDLA 69 (333)
T ss_dssp EEEEEEEEEECCSEE--EEHHHHHHHHC----CCCC----HHHHHHHHCCSEEEECCTTC--------------CHHHHH
T ss_pred ceEEEEEEEECCCcE--EcHHHHHHHhcccc-CCCC----HHHhHHhcCceEEEEcCCCC--------------CHHHHH
Confidence 689999999999996 99999999864321 2221 15889999999999887643 267999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
.+|+++||+++|++++|||.||++|+ +++..|+.+.+++.+||+++++++++++ ++|+|++.||.+|.++|++|+.++
T Consensus 70 ~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 148 (333)
T 4dfe_A 70 FIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQ-AVCSGFAYAVATADSFIRSGQHRT 148 (333)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEEEEE-CGGGHHHHHHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEEEeC-cccHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999974 6777899999999999996689999999 699999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCee
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVG 241 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (401)
|||+++|.+|..+++ .++. +..+|||||+|+||++.+.. +++.+.+.+++..++.+..+.+.... .
T Consensus 149 vLvvg~e~~s~~~~~-~d~~---~~~lfGDGA~A~vl~~~~~~---------~i~~~~~~~~g~~~~~~~~~~~~~~~-~ 214 (333)
T 4dfe_A 149 ALVIGAETFSRILDF-KDRT---TCVLFGDGAGAVILQASDEP---------GVLASALHADGSHSNILCTPGNVNGG-V 214 (333)
T ss_dssp EEEEEEEEGGGGCCT-TCTT---TTTTBCEEEEEEEEEEESSC---------SEEEEEEEECGGGGGGEEBCEEEETT-E
T ss_pred EEEEEeeccccccCc-cccc---ceeeeccccEEEEEEEcCCC---------CeEEEEEEEccCCcCeEEECCCCCCc-c
Confidence 999999999998876 5554 56899999999999987642 12344455666655544433110000 0
Q ss_pred eEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc------cCCCcchhhhcceEeecCCChHHHHHHHHH
Q 044359 242 VSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS------KTYVPNFKKAFEHFCIHAGGRAIIDAVEEN 315 (401)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~l~~~~~~did~~i~Hq~~~~~~~~~~~~ 315 (401)
..- . ....|++.+.++++.+.+++.+ +++. ++|||+|++||+|+++++.+++.
T Consensus 215 ~~~-~-----------------~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~---~~did~~~~Hq~~~~i~~~~~~~ 273 (333)
T 4dfe_A 215 VSG-S-----------------AFLHMDGQAVFKLAVNVLEKVAVEALEKANLS---AEQIDWLIPHQANIRIMQSTCRK 273 (333)
T ss_dssp EEE-C-----------------CSCEECHHHHHHHHHHHHHHHHHHHHHHTTCC---GGGCSEEEECCSCHHHHHHHHHH
T ss_pred ccc-C-----------------cceeeccHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEEcCCCHHHHHHHHHH
Confidence 000 0 0011122223333333333222 3565 79999999999999999999999
Q ss_pred cCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeee
Q 044359 316 LKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 316 lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
||++++|+. .++++||||+|||+|++|++++++|++++||+|++++||+|++|++++|||
T Consensus 274 lgl~~~~~~---~~l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 333 (333)
T 4dfe_A 274 LGLPQERMI---VTVGEHGNTSAASIPLALDVAVRDGRIKRGQNVLIEGVGGGFTWGASVIRY 333 (333)
T ss_dssp TTCCGGGBC---CCHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred hCCCHHHhh---hhHHhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEC
Confidence 999999994 689999999999999999999999999999999999999999999999997
No 11
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=100.00 E-value=1.1e-52 Score=416.61 Aligned_cols=345 Identities=15% Similarity=0.162 Sum_probs=262.5
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccC------------------
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHE------------------ 64 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~------------------ 64 (401)
.++|.++|+++|++. |+|+|+.+++..... +.++++.+++|++++||++||++.+.+..
T Consensus 26 ~~~i~~i~ta~P~~~--~~q~~~~~~~~~~~~-~~~~~~~~~~i~~~sgI~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~ 102 (413)
T 3v7i_A 26 AAYLCAPAVIHGEHS--VETREIVEEVRGRHP-HAPWAPRIDGIAASTGIESRGWMLPLEAAVAPGGGGDLGAAREALVR 102 (413)
T ss_dssp CEEEECCEEEECSEE--EEHHHHHHHHHHHCS-SCSSGGGHHHHHHHHTCSEEEESSCHHHHHSCCCCCCCHHHHHHC--
T ss_pred CeEEEeeEeeCCCcc--cCHHHHHHHHHHhcc-cchhHHHHHHHHHhCCcCeeeeecCHHHhcccccccccccccccccc
Confidence 589999999999997 999999999876422 22344447899999999999987652211
Q ss_pred -----------------CCCCCChHH----HHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHH
Q 044359 65 -----------------MQPDVSLKR----SREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINK 123 (401)
Q Consensus 65 -----------------~~~~~~l~~----~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~ 123 (401)
....+++.+ +.+++.+|+.+|+++||+++|++++|||+||++|++++..|+.+.+|+.+
T Consensus 103 ~~~~n~~l~~~~~~~e~i~~rtgi~~R~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~ 182 (413)
T 3v7i_A 103 DGFTEQDANRAIAALKAVPASQTVQERTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANR 182 (413)
T ss_dssp ----CHHHHHHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHH
T ss_pred cccchhhhhhhcCcccceecCCCHHHhCcccccCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHH
Confidence 011233322 35678999999999999999999999999999986556789999999999
Q ss_pred cCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCCCCCCCc--chhhhhhcccccceEEEEecC
Q 044359 124 FGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTK--SMLISNTVFRMGGAAILLSNR 201 (401)
Q Consensus 124 LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~d~--~~~i~~~lfGDGAaA~ll~~~ 201 (401)
||+++++.++++.+++|+|++.||.+|.+++++|+.++||||++|.+|..+++ .|+ ++++...+|||||+|+||+++
T Consensus 183 LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~~~-~d~~~~~lv~~~LFGDGAaAvvl~~~ 261 (413)
T 3v7i_A 183 LPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTYQP-ADDTLESLIVRLLFADTAVAAVVTGR 261 (413)
T ss_dssp TTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGCCS-SCCSTTHHHHHHHBCCEEEEEEEESS
T ss_pred hCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccccccCc-cccchhhhhcceeeccccEEEEEEec
Confidence 99987789999943799999999999999999999999999999999998876 444 456778999999999999987
Q ss_pred CCCccccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHH
Q 044359 202 QQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVV 281 (401)
Q Consensus 202 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (401)
+... +.|++.+.. +.+.+++.. .+.+..... ...+.+.+++|..+.. +...++.+ ++. ..
T Consensus 262 ~~~~--~~~~l~~~~-~~~~p~~~~--~~~~~~~~~-g~~~~m~~~v~~~v~~-~~~~i~~~-------L~~------~~ 321 (413)
T 3v7i_A 262 PRPE--SVLRLDAAW-HHTLPGTRD--LHRLETRAD-GTHFVMDRRGPRAVQE-TVTAMWEW-------LRV------RY 321 (413)
T ss_dssp CCTT--EEEEEEEEE-EEECTTCTT--SEEEEEETT-EEEEEECTTHHHHHHH-HHHHHHHH-------HHH------HT
T ss_pred CCCC--CCEEEEccc-cEEeCCCcc--ccCccccCC-ceEEEECcHHHHHHHH-HHHHHHHH-------Hhh------cc
Confidence 6421 356665432 222233221 111111111 2245566666543332 22222211 110 00
Q ss_pred hhhccCCCcchhhhcceEeecCCChHHHHHHHHHcC--CCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCe
Q 044359 282 CKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEENLK--LSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDR 359 (401)
Q Consensus 282 ~~~l~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lg--i~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~ 359 (401)
+..-.+ .+ ||+|++||+|+++++.++++|| ++++|+..|+.+++ ||||+|||+|++|++++ ++++++||+
T Consensus 322 ~~~~~g-----l~-id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~-~~~~~~Gd~ 393 (413)
T 3v7i_A 322 EDDPSS-----WH-PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH-DAGQKTGSR 393 (413)
T ss_dssp SSSCTT-----CC-CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH-HHCCCTTCE
T ss_pred ccccCC-----Cc-eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH-hCCCCCCCE
Confidence 000011 23 9999999999999999999999 99999988889999 99999999999999999 678999999
Q ss_pred EEEEeeccchhhcceeeeee
Q 044359 360 VWQIAFGSGFKVNSAVWKCV 379 (401)
Q Consensus 360 vll~~~G~G~s~~~~~l~~~ 379 (401)
++|++||+|++|+++++||.
T Consensus 394 vll~~fG~Glt~~~~ll~w~ 413 (413)
T 3v7i_A 394 AVLYAAAPGLTATALEGEWL 413 (413)
T ss_dssp EEEEEEETTTEEEEEEEEEC
T ss_pred EEEEEECHHHhHhhhheEeC
Confidence 99999999999999999984
No 12
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=100.00 E-value=5.9e-53 Score=413.40 Aligned_cols=321 Identities=17% Similarity=0.249 Sum_probs=256.7
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
++++|.++|+|+|++. |+|+++.+.++ .++ +|+.+++||++||++.+++ ++.+|
T Consensus 24 ~~~~I~~~g~~~P~~~--v~~~~l~~~~~----~~~------~~i~~~tGi~~R~~a~~~~--------------~~~~L 77 (359)
T 3h78_A 24 GNPILAGLGFSLPKRQ--VSNHDLVGRIN----TSD------EFIVERTGVRTRYHVEPEQ--------------AVSAL 77 (359)
T ss_dssp CCCEEEEEEEECCSEE--EEHHHHTTTSS----CCH------HHHHHHHCCCEEEECCTTC--------------CTHHH
T ss_pred CCcEEEEEEEECCCce--EcHHHHHHHhC----CCH------HHHHHhcCceEEEEcCCCC--------------CHHHH
Confidence 4799999999999996 99999998643 222 5889999999999987643 14699
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNS 160 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~ 160 (401)
+.+|+++||+++|++++|||.||++++ +++..|+.+.+++++||++ ++++++++ ++|+|++.||.+|.++|++|..+
T Consensus 78 a~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~-~aC~s~~~Al~~A~~~i~sG~~~ 155 (359)
T 3h78_A 78 MVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR-HIPVLDIR-AQASGLLYGLQMARGQILAGLAR 155 (359)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCC-SCCEEEEE-CGGGHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCC-CCcEEEEC-CHhHHHHHHHHHHHHHHHCCCcC
Confidence 999999999999999999999999974 6677899999999999997 79999999 59999999999999999999999
Q ss_pred eEEEEeeccccCCCCCCCC--cchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCC
Q 044359 161 LALVLSMEAISSNGYTGST--KSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDG 238 (401)
Q Consensus 161 ~vLvv~~e~~s~~~~~~~d--~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (401)
+||||++|.+|..+++ .| +. +..+|||||+|+||++.+... . +++...+.+++.+++.+..+.+ |
T Consensus 156 ~vLvvg~e~~S~~~~~-~d~~~~---t~~lfGDGAaA~vl~~~~~~~----~---~i~~~~~~s~g~~~~~~~~~~~--g 222 (359)
T 3h78_A 156 HVLVVCGEVLSKRMDC-SDRGRN---LSILLGDGAGAVVVSAGESLE----D---GLLDLRLGADGNYFDLLMTAAP--G 222 (359)
T ss_dssp EEEEEEEEECGGGCCC-STTTHH---HHTTBCEEEEEEEEECCSCSS----S---EEEEEEEEECGGGGGGEEBCCS--S
T ss_pred EEEEEEEchhcccCCc-cccccc---ccceecceeEEEEEEecCCCC----C---ceEEEEEEEccCccceEEeCCC--C
Confidence 9999999999998876 55 54 678999999999999876411 1 2334455567766665544321 1
Q ss_pred CeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc------cCCCcchhhhcceEeecCCChHHHHHH
Q 044359 239 NVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS------KTYVPNFKKAFEHFCIHAGGRAIIDAV 312 (401)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~l~~~~~~did~~i~Hq~~~~~~~~~ 312 (401)
....+.. ++. .. ......+.|++.++|+++++.+++.+ +++. .+|||+|++||+|+++++.+
T Consensus 223 ~~~~~~~---~~~----~~--~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~---~~did~~v~Hq~n~~i~~~~ 290 (359)
T 3h78_A 223 SASPTFL---DEN----VL--REGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELT---LDDIDHVICHQPNLRILDAV 290 (359)
T ss_dssp TTSSSTT---CHH----HH--HTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHTTCC---GGGCSEEEECCSCHHHHHHH
T ss_pred CccCCcc---ccc----cc--cccCCceEeccHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEECCCCHHHHHHH
Confidence 0000000 000 00 00111233455666776666666555 3565 79999999999999999999
Q ss_pred HHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeec
Q 044359 313 EENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVS 380 (401)
Q Consensus 313 ~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~ 380 (401)
+++||+|++|+. .++++||||++||+|++|++++++ +++||+|+|++||+|++|+++++||..
T Consensus 291 ~~~lgl~~ek~~---~~l~~~GNt~sAsi~l~L~~~~~~--l~~Gd~vll~~fG~G~t~~~~ll~~~~ 353 (359)
T 3h78_A 291 QEQLGIPQHKFA---VTVDRLGNMASASTPVTLAMFWPD--IQPGQRVLVLTYGSGATWGAALYRKPE 353 (359)
T ss_dssp HHHHTCCGGGBC---CCHHHHCBCGGGHHHHHHHHHGGG--SCTTCEEEEEEEETTTEEEEEEEECC-
T ss_pred HHHhCcCHHHhh---hhhhcccchHHHHHHHHHHHHHHh--CCCCCEEEEEEEchhhhheeeeEEehh
Confidence 999999999994 689999999999999999999987 999999999999999999999999944
No 13
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.3e-52 Score=415.03 Aligned_cols=337 Identities=14% Similarity=0.189 Sum_probs=253.5
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcC------------------CCChhhHHHHHHHHHHcCCCCceecCCCc
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSN------------------VFDKESLDFQEKVLEKSGIGDESCIPLNL 62 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~------------------~~~~~~~~~~~~i~~~~GI~~R~~~~~~~ 62 (401)
|.+++|.|+|+|+|+++ |+|+|+.+.++... ..+.. .+||.+++||++||++.++.
T Consensus 22 ~~~~~I~gig~~~P~~~--v~n~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~e~I~~~tGI~~R~~a~~~~ 95 (392)
T 3led_A 22 VRPAVIAATGLYTPPDS--VSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSS----SEFIEKASGIKSRYVVAKPG 95 (392)
T ss_dssp CCCEEEEEEEEECCSEE--EEHHHHHHHHHHHHHHHHHHTHHHHHTTSSCCCCCCC----HHHHHHHHCCCEEEESCCGG
T ss_pred cCceEEEEEEEeCCCce--EcHHHHHHHHhhhhcccccccchhhhcccccccCCCc----HHHHHHccCCceEEEecCcc
Confidence 57899999999999997 99999998754210 01111 36899999999999987631
Q ss_pred -c---CCCC--CCChHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEe
Q 044359 63 -H---EMQP--DVSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINL 135 (401)
Q Consensus 63 -~---~~~~--~~~l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i 135 (401)
. +..+ +.....+.+.+.+|+.+|+++||+++|++++|||+||++| ++++..|+.+..|+.+||++ ++++|+
T Consensus 96 ~~~~~~~~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~--~~~~dv 173 (392)
T 3led_A 96 IVDPDVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLG--GFAFDM 173 (392)
T ss_dssp GGCTTTCSCCCCCCCTTSCCHHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCC--SEEEEE
T ss_pred cccccccccccccchhcccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCC--CeEEEE
Confidence 0 0000 0111122235789999999999999999999999999987 46788999999999999994 799999
Q ss_pred ecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeee
Q 044359 136 SGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHL 215 (401)
Q Consensus 136 ~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~ 215 (401)
+ ++|+|++.||.+|.++|++|..++||||++|.+|..+++ .|++ +..+|||||+|+||++++... +.+++++
T Consensus 174 ~-~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~~~d~-~dr~---t~~lFGDGA~A~vl~~~~~~~--~~~~i~~- 245 (392)
T 3led_A 174 N-VACSSATFGLKTAADFVGGGSVDAVLMVNPEICSGHLNF-RDRD---SHFIFGDVATAAIVERADDAQ--GGWSILG- 245 (392)
T ss_dssp E-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGCCT-TCTT---TTTTBCEEEEEEEEEEGGGCC--SSEEEEE-
T ss_pred C-CccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCCcCCc-Cccc---CCcccccccEEEEEEecCCCC--CCCeEEE-
Confidence 9 699999999999999999999999999999999998877 5666 678999999999999876421 2345443
Q ss_pred eeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc------cCCC
Q 044359 216 VRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS------KTYV 289 (401)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~l~ 289 (401)
+.+.+++.. .+.. + .|.. ....+.... .....+.|++.++|+++++.+++.+ +++.
T Consensus 246 --~~~~s~~~~--~~~~-~--~g~~----~~~~~~~~~-------~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~ 307 (392)
T 3led_A 246 --TKLKTQFSN--NIRN-N--AGFL----NRAWPEGRD-------KADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGID 307 (392)
T ss_dssp --EEEEECCCS--SEEB-C--CSGG----GGGSGGGTT-------SGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred --EEEEEcccc--cccc-C--CCcc----cCCCccccc-------cccceEEechHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 333333221 1111 0 0000 000000000 0001123455666667666666554 4565
Q ss_pred cchhhhcceEeecCCChHHHHHHHHHc-C--CCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeec
Q 044359 290 PNFKKAFEHFCIHAGGRAIIDAVEENL-K--LSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFG 366 (401)
Q Consensus 290 ~~~~~did~~i~Hq~~~~~~~~~~~~l-g--i~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G 366 (401)
++|||+|++||+|+++++.++++| | ++.+|+ +.++++||||+|||+|++|+++ .+++++||+|+|++||
T Consensus 308 ---~~dId~~v~Hqan~~i~~~~~~~llgl~~~~~k~---~~~l~~~GNtssAsipl~L~~~--~~~~~~Gd~vll~gfG 379 (392)
T 3led_A 308 ---PHGLKRMWLHQANINMNEIIGRKVLGRDPTRDEN---VIILDDYANTSSAGSIIAFHKH--QDDMAQGDLGLICSFG 379 (392)
T ss_dssp ---GGGCSEEEECSSCHHHHHHHHHHHHTSCCCTTTB---CCCHHHHCBCGGGHHHHHHHHC--CTTCCTTCEEEEEEEE
T ss_pred ---HHHCcEEEEcCCCHHHHHHHHHHhcCCCCCHHHH---HHHHhhhCccHHHHHHHHHHHH--hCCCCCCCEEEEEEEC
Confidence 799999999999999999999996 6 677888 5899999999999999999986 5789999999999999
Q ss_pred cchhhcceeeeee
Q 044359 367 SGFKVNSAVWKCV 379 (401)
Q Consensus 367 ~G~s~~~~~l~~~ 379 (401)
+|++|+++++||.
T Consensus 380 ~G~t~~~~ll~~~ 392 (392)
T 3led_A 380 AGYSAGTVFVQKR 392 (392)
T ss_dssp TTTEEEEEEEEEC
T ss_pred hhhEeEEEEEEEC
Confidence 9999999999984
No 14
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=100.00 E-value=3.1e-52 Score=406.84 Aligned_cols=315 Identities=16% Similarity=0.171 Sum_probs=245.7
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcC---CCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSN---VFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREE 77 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~---~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~ 77 (401)
|.+++|.++|+|+|+++ |+|+|+.+.+.... ..+. +||.+++||++||++.++. +
T Consensus 10 ~~~v~I~~~g~~lP~~~--v~n~~l~~~~~~~~~~~~~~~------~~i~~~tGi~~R~~~~~~~--------------~ 67 (345)
T 3s21_A 10 FQNVSIAGLAHIDAPHT--LTSKEINERLQPTYDRLGIKT------DVLGDVAGIHARRLWDQDV--------------Q 67 (345)
T ss_dssp CSSEEEEEEEEEECSEE--EEHHHHHHHHHHHHHHHTCCC------CHHHHTTCCSEEEECSSCC--------------C
T ss_pred ecceEEEEEEEeCCCcE--EcHHHHHHHHhhcccccCCCH------HHHHHhhCceeEEECCCCC--------------C
Confidence 46899999999999997 99999998764210 0112 4789999999999987643 2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
+.+|+.+|+++||+++|++++|||.||++| ++++..|+.+.+++++||+++++++++++ .+|+|++.||.+|.++|++
T Consensus 68 ~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~-~aC~s~~~al~~A~~~i~~ 146 (345)
T 3s21_A 68 ASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVA-NACLAFINGMDIAARMLER 146 (345)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECC-CGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeEC-CcCHHHHHHHHHHHHHHHC
Confidence 679999999999999999999999999987 46888899999999999998679999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccCCCCCC-----CCcc------hhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCcc
Q 044359 157 HKNSLALVLSMEAISSNGYTG-----STKS------MLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQ 225 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~~~~~~-----~d~~------~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~ 225 (401)
|..++|||+++|.+|..+++. .++. ......+|||||+|+||++.+.... ..+++ .+...+++.
T Consensus 147 g~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~f~~~~~~~~~GdGA~A~vl~~~~~~~~--~~~i~---~~~~~~~~~ 221 (345)
T 3s21_A 147 GEIDYALVVDGETANLVYEKTLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARSELVPD--APRYK---GGVTRSATE 221 (345)
T ss_dssp TSCSEEEEEEEECCHHHHHHHHHHHTCTTCCHHHHHHHHGGGGBCCEEEEEEEEEGGGSTT--SCEEE---EEEEEECGG
T ss_pred CCCCEEEEEEEcccchhhccccccccCCccchhhhhhhccceeeccceeEEEEecCCCCCC--Cccee---eeccccCcc
Confidence 999999999999998765421 0111 1224688999999999998764311 23343 233334443
Q ss_pred ccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc------cCCCcchhhhcceE
Q 044359 226 AYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS------KTYVPNFKKAFEHF 299 (401)
Q Consensus 226 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~l~~~~~~did~~ 299 (401)
.++. +.+.. . ++ . |++.+.++++++.+++.+ +++. .+|||+|
T Consensus 222 ~~~~-~~~~~--~--~~--~----------------------~~g~~v~~~~~~~~~~~i~~~l~~~gl~---~~did~~ 269 (345)
T 3s21_A 222 WNKL-CRGNL--D--RM--V----------------------TDTRLLLIEGIKLAQKTFVAAKQVLGWA---VEELDQF 269 (345)
T ss_dssp GTTC----------------------------------------CHHHHHHHHHHHHHHHHHHHHHHCCC---GGGCSEE
T ss_pred hhhh-ccccC--c--ce--E----------------------EcHHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEE
Confidence 3321 11100 0 01 0 111222333333333222 3565 7999999
Q ss_pred eecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeee
Q 044359 300 CIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 300 i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
++||+|+++++.++++||+|++|+ +.++++||||+|||+|++|++++++|++++||+|+|++||+|++|++++|||
T Consensus 270 v~Hq~~~~i~~~~~~~lgl~~ek~---~~~l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~~l~w 345 (345)
T 3s21_A 270 VIHQVSRPHTAAFVKSFGIDPAKV---MTIFGEHGNIGPASVPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAEVVW 345 (345)
T ss_dssp EECCSCHHHHHHHHHHHTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHHTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred EeCCCCHHHHHHHHHHcCcCHHHc---eeeHhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhhhheEEEEEC
Confidence 999999999999999999999999 4789999999999999999999999999999999999999999999999998
No 15
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=100.00 E-value=2.7e-50 Score=394.43 Aligned_cols=331 Identities=14% Similarity=0.155 Sum_probs=239.0
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEE 80 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~ 80 (401)
+++++|.|+|+|+|++. ++|+++... .+.+ +..+++||++||++.++++ . ++.+
T Consensus 3 ~~~v~I~g~g~ylP~~~--~~~~~~~~~------~~~~------~~~~~tGi~~r~~a~~~e~-----~-------~~~~ 56 (357)
T 3s3l_A 3 WENLFVSGVAAWLPPLS--TAQDAVMAG------LLDP------ARSKLRGIESVTVASDAEE-----D-------APPR 56 (357)
T ss_dssp CSSCEEEEEEEECCCEE--EHHHHHHTT------SSCH------HHHHHHCCCEEECCCSSGG-----G-------SHHH
T ss_pred cCceEEEEEEEECCCCC--CHHHHHHhc------CCcH------HHHHHcCceEEEecCCCCC-----C-------CHHH
Confidence 56899999999999974 666554321 2221 2358899999999765310 0 2579
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEeeec--CCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCC
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTNCSI--FCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHK 158 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~s~~--~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~ 158 (401)
|+.+|+++||+++|++++|||.||++|+. ....++.+.+++.+||++ ++++++++ ++|+|++.||.+|.++|++|.
T Consensus 57 La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~-~aC~~~~~al~~A~~~i~sg~ 134 (357)
T 3s3l_A 57 MAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLA-QRCNGGMGAIELAGAYLGSGI 134 (357)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEE-CGGGHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEc-CccHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999998752 222346799999999997 79999999 599999999999999999999
Q ss_pred CC--eEEEEeeccccC-CCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCcccccccccccc
Q 044359 159 NS--LALVLSMEAISS-NGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQD 235 (401)
Q Consensus 159 ~~--~vLvv~~e~~s~-~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
.+ +||||++|.+|. .++++.++ +..+|||||+|+||++.+... . ++.+.+.+++...+ ++...+
T Consensus 135 ~~~~~vLvvg~e~~s~~~~~~~~~~----~~~lfGDGA~A~vl~~~~~~~-----~---i~~~~~~s~g~~~~-~~~~~~ 201 (357)
T 3s3l_A 135 GAGHAALLTTGDRFAGPRIDRWNSV----DVTMYGDGAAALVLSTRDGFA-----R---VLSTATGVDNSLEI-LARGDE 201 (357)
T ss_dssp SSSSEEEEEEEECCCTTTCCTTTSS----SSCCBCCEEEEEEEESSCCSE-----E---EEEEEEEECGGGGG-GGTTTC
T ss_pred CCCCEEEEEEEeccccccccccccc----CCcccccccEEEEEecCCCCC-----e---EEEEEEEEccChhh-hcccCC
Confidence 88 999999999995 56543444 368999999999999876431 2 33445556665433 222111
Q ss_pred CCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHH-HHHHHHhhhc------cCCCcchhhhcceEee-cCCChH
Q 044359 236 KDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLK-YLWSVVCKKS------KTYVPNFKKAFEHFCI-HAGGRA 307 (401)
Q Consensus 236 ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l------~~l~~~~~~did~~i~-Hq~~~~ 307 (401)
...... .-......+.++ +.+....+..+ .+. ++++.+++.+ +++. .+|||+|++ ||+|.+
T Consensus 202 ~~~~~~-~~~~~~~~~~g~--~~~~~~~g~~~-----~~~~~~~~~~~~~i~~~L~~~gl~---~~did~~v~~hq~~~~ 270 (357)
T 3s3l_A 202 PFAPHP-VEPSPVADLGTR--TVRGAELADLP-----DLTHRYIDLLVAAKTQALEDAGTA---IEDIAHAVIPVSRRGT 270 (357)
T ss_dssp CCCSSC-CSSCCCCCHHHH--HHHHHHHHCCT-----THHHHHHHHHHHHHHHHHHHTTCC---GGGCSEEECCSCCCCS
T ss_pred CCCCCc-cCcCCccccccc--hhhhhcccchh-----hhHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEecCcChHH
Confidence 000000 000011122221 11111111100 022 3333444333 4665 899999995 999999
Q ss_pred HHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccCCcCCC
Q 044359 308 IIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDPKER 387 (401)
Q Consensus 308 ~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~~~~ 387 (401)
++.++++||+|++|+. +.+..+||||++||+|++|++++++|++++||+|+|++||+|++|+++++||.+ .
T Consensus 271 -~~~~~~~lgl~~ek~~--~~~~~~~GNt~aAsipl~L~~~~~~g~l~~Gd~vll~~fG~G~t~~a~ll~~~~------~ 341 (357)
T 3s3l_A 271 -GHELHDLLGLPDERTS--WAYGRTTGHVGAGDQYAGLAHLVENALVQPGDRVLLFGGGAGYTCTAAVVEILR------M 341 (357)
T ss_dssp -SCCHHHHHTSCGGGBT--HHHHHHHCBCTTCHHHHHHHHHHHTTCCCTTCEEEEECCBTTTEEEEEEEEECC------C
T ss_pred -HHHHHHHcCCCHHHhH--HHhccccccchHhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeeEEecc------C
Confidence 9999999999999995 445578999999999999999999999999999999999999999999999998 5
Q ss_pred CCccc
Q 044359 388 NAWSD 392 (401)
Q Consensus 388 ~~~~~ 392 (401)
|.|.+
T Consensus 342 p~~~~ 346 (357)
T 3s3l_A 342 PAQCM 346 (357)
T ss_dssp C----
T ss_pred CCCCC
Confidence 66654
No 16
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=100.00 E-value=4.9e-49 Score=388.49 Aligned_cols=346 Identities=16% Similarity=0.228 Sum_probs=260.2
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCC------CCCCChHH---
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEM------QPDVSLKR--- 73 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~------~~~~~l~~--- 73 (401)
+++|.|+|+|+|++. ++|+|+.+.+......+.+..+..+++++++||++||++.++.... ...+....
T Consensus 13 ~v~I~g~g~~~P~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (374)
T 2h84_A 13 NSFVLGIGISVPGEP--ISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHLETITDVNNQ 90 (374)
T ss_dssp CCEEEEEEEECSSSC--EEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEECCSSCTTSGGGCGGGGGGCCHHHHHHH
T ss_pred CeEEEEEEEeCCCcc--cCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcceeecCccccccccccCChHHHHHHHHH
Confidence 689999999999997 9999999987642212233334567899999999999886541100 00111122
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHH
Q 044359 74 SREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDL 153 (401)
Q Consensus 74 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~ 153 (401)
+.+...+|+.+|+++||+++|+++++||.||++++.++..|+.+.+|+.+||++.+++++++++++|+|++.||.+|.++
T Consensus 91 ~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~ 170 (374)
T 2h84_A 91 FKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASL 170 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHH
Confidence 44788999999999999999999999999999886566789999999999999856899999745999999999999999
Q ss_pred HHcCCCCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCcccccccccc
Q 044359 154 LKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQ 233 (401)
Q Consensus 154 i~~g~~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
|++|..++|||+++|.+|..++.+.+++..+..++|||||+|+||++.+...+.+.+++.+.-. ...+++..... +.
T Consensus 171 i~~g~~~~vLv~g~e~~s~~~~~~~dr~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~--~~ 247 (374)
T 2h84_A 171 AKASPRNRILVVCTEVCSLHFSNTDGGDQMVASSIFADGSAAYIIGCNPRIEETPLYEVMCSIN-RSFPNTENAMV--WD 247 (374)
T ss_dssp HTTCTTCEEEEEEEECCGGGCCCSSSHHHHHHHHHBCCEEEEEEEESSCCTTCCCCEEEEEEEE-EECSSCTTSEE--EE
T ss_pred HHcCCCCEEEEEEEEecchhhcCCCCHHHHhhhhhhccCcEEEEEecCCCcccCCceeEEeeee-EEeCCCcccce--eE
Confidence 9999999999999999998663336665555679999999999999876421122355553222 22222211110 11
Q ss_pred ccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccC------CCcchhhhcceEeecCCChH
Q 044359 234 QDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKT------YVPNFKKAFEHFCIHAGGRA 307 (401)
Q Consensus 234 ~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------l~~~~~~did~~i~Hq~~~~ 307 (401)
....| ..+...++++....+.+...++.. ++. ++ +. ++|||+| +||+|.+
T Consensus 248 ~~~~g-~~~~~~~~v~~~~~~~~~~~i~~~-------L~~------------ag~~~~~~l~---~~did~~-~H~~~~~ 303 (374)
T 2h84_A 248 LEKEG-WNLGLDASIPIVIGSGIEAFVDTL-------LDK------------AKLQTSTAIS---AKDCEFL-IHTGGKS 303 (374)
T ss_dssp EETTE-EEEEECTTHHHHHHHHHHHHHHHH-------HHH------------HTTTSCSCCC---SSSSEEE-ECCCCHH
T ss_pred EecCc-EEEEeCchHHHHHHHHHHHHHHHH-------HHh------------cCCccccCCC---hhhcCEe-ECCCCHH
Confidence 11111 123344566654433333322211 111 24 54 6899999 9999999
Q ss_pred HHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeee
Q 044359 308 IIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCV 379 (401)
Q Consensus 308 ~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~ 379 (401)
+++.+++.||++++|+..++.++++||||++||+|++|++++++++ +||+|++++||+|++|++++|||.
T Consensus 304 i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~~~~~--~Gd~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 304 ILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKS--LPTYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp HHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHHTCSC--CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHhhcC--CCCeEEEEEeccchhhhhhhheec
Confidence 9999999999999999765678999999999999999999999887 899999999999999999999985
No 17
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=100.00 E-value=6.1e-49 Score=390.14 Aligned_cols=347 Identities=18% Similarity=0.204 Sum_probs=262.0
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCcee-cCCCccCCC-------C--CCChH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESC-IPLNLHEMQ-------P--DVSLK 72 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~-~~~~~~~~~-------~--~~~l~ 72 (401)
+++|.++|+|+|++. ++|+|+.+.++.....+... ++.+||++++||++||+ +.++. .++ + ..++.
T Consensus 32 ~~~I~~ig~~~P~~~--v~n~~l~~~~~~~~~~~~~~-~~~~~i~~~tGI~~R~~~a~~~~-~~~~~~~~~p~~~~~r~~ 107 (393)
T 1ted_A 32 VAVIEGLATGTPRRV--VNQSDAADRVAELFLDPGQR-ERIPRVYQKSRITTRRMAVDPLD-AKFDVFRREPATIRDRMH 107 (393)
T ss_dssp EEEEEEEEEECCSCE--EEHHHHHHHHHTC----CCT-THHHHHHHTSCCSEEECSSCTTS-TTHHHHTTCSSCHHHHHH
T ss_pred ccEEEEeeeeCCCcc--cCHHHHHHHHHHhcccccHH-HHHHHHHHhCCcCcceeeecChH-hcccccccCCCCHHHHHH
Confidence 489999999999997 99999999876432111111 34579999999999998 76521 100 0 01234
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEe-ecccchhHHHHHHHHH
Q 044359 73 RSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINL-SGMGCSAGILSISLVK 151 (401)
Q Consensus 73 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i-~~~gC~~~~~aL~~A~ 151 (401)
.+.+.+.+|+.+|+++||+++|+++++||.||++++..+..|+.+.+|+.+||++..++++++ + ++|+|++.||.+|.
T Consensus 108 ~~~~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~-~aCas~~~Al~~A~ 186 (393)
T 1ted_A 108 LFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNF-MGCAAAMNALGTAT 186 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEES-CGGGHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCCcceeEecc-chhHHHHHHHHHHH
Confidence 456788999999999999999999999999999875446689999999999999866788998 6 69999999999999
Q ss_pred HHHHcCCCCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCc-cccce-EEeeeeeecccCCcccccc
Q 044359 152 DLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDK-HIAKY-KLKHLVRTHMGYDDQAYSS 229 (401)
Q Consensus 152 ~~i~~g~~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~-~l~~~~~~~~~~~~~~~~~ 229 (401)
++|++|..++|||+++|.+|..++++.++++.++.++|||||+|+||++.+... ..+.| ++.+. .+.+.+++.....
T Consensus 187 ~~i~~G~~~~vLv~g~e~~s~~~~~~~~r~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~i~~~-~~~~~~d~~~~~~ 265 (393)
T 1ted_A 187 NYVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSS-FSQLLDNTEDGIV 265 (393)
T ss_dssp HHHHHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEE-EEEECTTCTTSEE
T ss_pred HHHHcCCCCEEEEEEEEeccccCCCCCCHHHhhhhhhhcCccEEEEEecCCCccccCcceeeeecc-ceEEcCCchhhcc
Confidence 999999999999999999998776545666555679999999999999865320 11222 44432 1223344432221
Q ss_pred ccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHH
Q 044359 230 VFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAII 309 (401)
Q Consensus 230 ~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~ 309 (401)
.. .. ..+ ..+...++++....+.+...++.. ++. +++. ++|||+|++||+|.+++
T Consensus 266 ~~-~~-~~g-~~~~~g~~v~~~~~~~~~~~i~~a-------L~~------------agl~---~~dId~~~~H~~~~~i~ 320 (393)
T 1ted_A 266 LG-VN-HNG-ITCELSENLPGYIFSGVAPVVTEM-------LWD------------NGLQ---ISDIDLWAIHPGGPKII 320 (393)
T ss_dssp EE-EE-TTE-EEEEECTTHHHHHHHHHHHHHHHH-------HHH------------TTCC---GGGCSCEEECCSCHHHH
T ss_pred ce-ec-CCC-eEEecCchHHHHHHHHHHHHHHHH-------HHH------------cCCC---HhHCCEEEECCCcHHHH
Confidence 11 11 111 122234455554433333222211 111 3565 79999999999999999
Q ss_pred HHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCC-CCCCeEEEEeeccchhhcceeeeeec
Q 044359 310 DAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKV-KKGDRVWQIAFGSGFKVNSAVWKCVS 380 (401)
Q Consensus 310 ~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l-~~Gd~vll~~~G~G~s~~~~~l~~~~ 380 (401)
+.+++.||++++|+..|+.++++||||++||+|++|++++++|++ ++||+|++++||+|++|++++|||..
T Consensus 321 d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~~g~~~~~Gd~vll~~~G~G~t~~~~~l~~~~ 392 (393)
T 1ted_A 321 EQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIR 392 (393)
T ss_dssp HHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEECC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHhcCccCCCCCeEEEEEeccchhhhhhheeecc
Confidence 999999999999997667899999999999999999999999999 59999999999999999999999975
No 18
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=100.00 E-value=2.4e-48 Score=385.22 Aligned_cols=349 Identities=18% Similarity=0.245 Sum_probs=257.2
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCC-hhh-HHHHHHHHHHcCCCCceecCCCc-cC--------CCC--C
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFD-KES-LDFQEKVLEKSGIGDESCIPLNL-HE--------MQP--D 68 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~-~~~-~~~~~~i~~~~GI~~R~~~~~~~-~~--------~~~--~ 68 (401)
.+++|.++|+|+|++. ++|+|+.+.+......+ .++ .+..+||++++||++||++.++. .. ..+ +
T Consensus 15 ~~~~I~g~g~~~P~~~--v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~p~~~~~~~~~~~ 92 (389)
T 1i88_A 15 GPATILAIGTANPANC--VEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVCEYMAPSLD 92 (389)
T ss_dssp SCCEEEEEEEECCSCE--EEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEEECSCCHHHHHHCHHHHSSSCSCHH
T ss_pred CCeEEEEEEeeCCCcc--cCHHHHHHHHHHhcccccchhHHHHHHHHHHhCCCCceeeecChhhhccCcchhcccCCChH
Confidence 4689999999999997 99999999875321111 112 23467899999999999886531 00 000 1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcc-eEEeecccchhHHHHH
Q 044359 69 VSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIK-SINLSGMGCSAGILSI 147 (401)
Q Consensus 69 ~~l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~-~~~i~~~gC~~~~~aL 147 (401)
..+..+.+.+.+|+.+|+++||+++|++++|||+||++|++++..|+.+.+++++||++..++ +++++ ++|+|++.||
T Consensus 93 ~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~-~aC~~~~~al 171 (389)
T 1i88_A 93 ARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQ-QGAFAGGTVL 171 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEES-CCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCCCchHHHHHHHHcCcCCCchhheeEC-CccHHHHHHH
Confidence 123445678899999999999999999999999999998655778999999999999985565 89999 5999999999
Q ss_pred HHHHHHHHcCCCCeEEEEeeccccCCC-CCC-CCcchhhhhhcccccceEEEEecCCCCc-cccceEEeeeeeecccCCc
Q 044359 148 SLVKDLLKVHKNSLALVLSMEAISSNG-YTG-STKSMLISNTVFRMGGAAILLSNRQQDK-HIAKYKLKHLVRTHMGYDD 224 (401)
Q Consensus 148 ~~A~~~i~~g~~~~vLvv~~e~~s~~~-~~~-~d~~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~~l~~~~~~~~~~~~ 224 (401)
.+|.++|++|..++||||++|.+|..+ ++. .++++..+..+|||||+|+||++.+... ....+++.+.-...+ +.+
T Consensus 172 ~~A~~~i~~g~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~-p~~ 250 (389)
T 1i88_A 172 RLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIA-PDS 250 (389)
T ss_dssp HHHHHHHHTSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTSCCCEEEEEEEEEEC-TTC
T ss_pred HHHHHHHHcCCCCEEEEEEEecccHhHcCccccccccccccceEecceEEEEEecCCCCccCCCceEEEeeeeEEc-CCC
Confidence 999999999999999999999999854 331 2333345678999999999999865421 111255543221111 111
Q ss_pred cccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCC
Q 044359 225 QAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAG 304 (401)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~ 304 (401)
.. .+.+... .....+.+.++++....+.+...++.+ ++. .++. + .+|| +|++||+
T Consensus 251 ~~--~~~~~~~-~~g~~~~~~~~v~~~~~~~~~~~i~~~-------L~~------------~gl~-d-~~di-~~v~Hq~ 305 (389)
T 1i88_A 251 EG--AIDVHLR-EAGLTFHLLKDVPGIVSKNITKALVEA-------FEP------------LGIS-D-YNSI-FWIAHPG 305 (389)
T ss_dssp TT--SEEEEEE-TTEEEEEECSCHHHHHHHHHHHHHHHH-------HGG------------GTCC-C-TTSS-EEEECCS
T ss_pred cc--cceeEEe-cCceEEEeccHHHHHHHHHHHHHHHHH-------HHh------------cCCC-c-hhhc-eEEECCC
Confidence 10 0100000 111234556666665554444333321 111 2332 1 4677 8999999
Q ss_pred ChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCC--------CeEEEEeeccchhhcceee
Q 044359 305 GRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKG--------DRVWQIAFGSGFKVNSAVW 376 (401)
Q Consensus 305 ~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~G--------d~vll~~~G~G~s~~~~~l 376 (401)
|+++++.+++.||++++|+..+++++++||||+|||+|++|++++++|+ ++| |+++|++||+|++|++++|
T Consensus 306 ~~~i~~~~~~~lgl~~ek~~~~~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~g~~~d~vll~~fG~G~t~~~~ll 384 (389)
T 1i88_A 306 GPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKST-QNGLKTTGEGLEWGVLFGFGPGLTIETVVL 384 (389)
T ss_dssp CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEE
T ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcc-ccCCcccCCCCceEEEEEecCccEEEEEEE
Confidence 9999999999999999999765578999999999999999999999887 888 9999999999999999999
Q ss_pred eeec
Q 044359 377 KCVS 380 (401)
Q Consensus 377 ~~~~ 380 (401)
||..
T Consensus 385 ~~~~ 388 (389)
T 1i88_A 385 RSVA 388 (389)
T ss_dssp EECB
T ss_pred EecC
Confidence 9973
No 19
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=100.00 E-value=2.9e-48 Score=385.92 Aligned_cols=348 Identities=17% Similarity=0.244 Sum_probs=257.0
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCC-hhh-HHHHHHHHHHcCCCCceecCCCc-cC-----C-C--C--C
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFD-KES-LDFQEKVLEKSGIGDESCIPLNL-HE-----M-Q--P--D 68 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~-~~~-~~~~~~i~~~~GI~~R~~~~~~~-~~-----~-~--~--~ 68 (401)
.+++|.++|+|+|++. ++|+|+.+.+......+ .++ .+..+||++++||++||++.++. .. . + + +
T Consensus 28 ~~~~I~g~g~~~P~~~--v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~~~~~ 105 (402)
T 3awk_A 28 GPATILAIGTSNPTNI--FEQSTYPDFFFDVTNCNDKTELKKKFQRICDKSGIKKRHFHLTDEILRKNPSICKFKEASLD 105 (402)
T ss_dssp SCEEEEEEEEECCSEE--EESTTHHHHHHHHTTCTTCHHHHHHHHHHHHHSSCSEEEESCCHHHHHHSGGGGSSSSSCHH
T ss_pred CCeEEEEEEecCCCCc--cCHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCcCceEEeeChhhhccCcccccccCCChH
Confidence 4689999999999997 99999999875321111 112 23467899999999999986531 00 0 0 0 1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcc-eEEeecccchhHHHHH
Q 044359 69 VSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIK-SINLSGMGCSAGILSI 147 (401)
Q Consensus 69 ~~l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~-~~~i~~~gC~~~~~aL 147 (401)
..+..+.+.+.+|+.+|+++||+++|+++++||+||++|++++..|+.+.+|+++||++..++ +++++ ++|+|++.||
T Consensus 106 ~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~-~aC~s~~~al 184 (402)
T 3awk_A 106 PRQDIAVLEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLGLRPTVKRVMLYQ-QGAYAGATVL 184 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSCCCSSCHHHHHHHHHTCCTTCEEEEEES-CGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCcCChHHHHHHHHcCCCCccceeeEEC-CccHHHHHHH
Confidence 123455678899999999999999999999999999998655778999999999999985565 89999 5999999999
Q ss_pred HHHHHHHHcCCCCeEEEEeeccccCCC-CCC-CCcchhhhhhcccccceEEEEecCCCCc-cccceEEeeeeeecccCCc
Q 044359 148 SLVKDLLKVHKNSLALVLSMEAISSNG-YTG-STKSMLISNTVFRMGGAAILLSNRQQDK-HIAKYKLKHLVRTHMGYDD 224 (401)
Q Consensus 148 ~~A~~~i~~g~~~~vLvv~~e~~s~~~-~~~-~d~~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~~l~~~~~~~~~~~~ 224 (401)
.+|.++|++|..++||||++|.+|..+ ++. .++++..+..+|||||+|+||++.+... ....+++.+.-...+ +++
T Consensus 185 ~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~-p~~ 263 (402)
T 3awk_A 185 RVAKDLAENNKGARVLVACSEVTAVTFRAPSETHLDGLVGSALFGDGAAALIVGSDPVPQEEKPLFEIHWAGEAVL-PDS 263 (402)
T ss_dssp HHHHHHHHTSTTCEEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCCEEEEEEEEEEC-TTC
T ss_pred HHHHHHHHcCCCCEEEEEEEeccchhhcCCCccCHHHhhccccccCceEEEEEecCCCccccCCceEEEeeeEEee-CCC
Confidence 999999999999999999999999844 431 2333455688999999999999865421 111255543211111 221
Q ss_pred cccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCC
Q 044359 225 QAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAG 304 (401)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~ 304 (401)
.. .+.+.....+ ..+.+.++++....+.+...++.+ ++. .++. + .+|| +|++||+
T Consensus 264 ~~--~~~~~~~~~g-~~~~~~~~v~~~~~~~~~~~i~~~-------L~~------------~gl~-d-~~di-~~v~Hq~ 318 (402)
T 3awk_A 264 DG--AINGHLREAG-LIFHLLKDVPGLISKNIDKVLAEP-------LEY------------VHFP-S-YNDM-FWAVHPG 318 (402)
T ss_dssp TT--SEEEEEETTE-EEEEECTTHHHHHHHHHHHHTHHH-------HHH------------TTCC-C-GGGE-EEEECCS
T ss_pred ch--hcceEEecCc-eEEEeCchHHHHHHHHHHHHHHHH-------HHh------------cCCC-C-ccce-eEEECCC
Confidence 10 0100000111 234556666665544443333221 111 2343 1 4677 8999999
Q ss_pred ChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCC--------CeEEEEeeccchhhcceee
Q 044359 305 GRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKG--------DRVWQIAFGSGFKVNSAVW 376 (401)
Q Consensus 305 ~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~G--------d~vll~~~G~G~s~~~~~l 376 (401)
|+++++.+++.||++++|+..+++++++||||+|||+|++|++++++|+ ++| |+++|++||+|++|++++|
T Consensus 319 ~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~g~g~d~vll~~fG~G~t~~~~ll 397 (402)
T 3awk_A 319 GPAILDQIEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIRKNSE-ELHLPTTGEGFEWGFVIGFGPGLTVETLLL 397 (402)
T ss_dssp CHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEE
T ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHhhcc-ccCCCcCCCCcceEEEEEecccceeeehee
Confidence 9999999999999999999765578999999999999999999999887 888 9999999999999999999
Q ss_pred eee
Q 044359 377 KCV 379 (401)
Q Consensus 377 ~~~ 379 (401)
|+.
T Consensus 398 ~~~ 400 (402)
T 3awk_A 398 RSI 400 (402)
T ss_dssp EEC
T ss_pred eec
Confidence 986
No 20
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=100.00 E-value=3.4e-48 Score=383.92 Aligned_cols=350 Identities=16% Similarity=0.210 Sum_probs=255.8
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCC--ChhhHHHHHHHHHHcCCCCceecCCCc-c-C-------CCC--CC
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVF--DKESLDFQEKVLEKSGIGDESCIPLNL-H-E-------MQP--DV 69 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~--~~~~~~~~~~i~~~~GI~~R~~~~~~~-~-~-------~~~--~~ 69 (401)
+++|.++|+|+|++. |+|+|+.+.+...... .++-.++.+||++++||++||++.++. . . ..+ +.
T Consensus 12 ~~~I~gig~~~P~~~--v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~p~~~~~~~~~~~~ 89 (387)
T 3a5r_A 12 LATVMAIGTANPPNC--YYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEILKENPNIAAYEATSLNV 89 (387)
T ss_dssp CEEEEEEEEECCSCE--EETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTTTCCEEECSCCHHHHHHCHHHHSSSSSCHHH
T ss_pred CcEEEEeeecCCCcc--cCHHHHHHHHHHhcccccchhhHHHHHHHHHhCCCCceEEecChhhhccCcccccccCCCHHH
Confidence 589999999999997 9999999987432111 111123467899999999999876531 0 0 000 11
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcc-eEEeecccchhHHHHHH
Q 044359 70 SLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIK-SINLSGMGCSAGILSIS 148 (401)
Q Consensus 70 ~l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~-~~~i~~~gC~~~~~aL~ 148 (401)
....+.+.+.+|+.+|+++||+++|++++|||+||++|++++..|+.+.+|+++||++..+. +++++ ++|+|++.||.
T Consensus 90 r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~-~aC~s~~~al~ 168 (387)
T 3a5r_A 90 RHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMFYH-LGCYAGGTVLR 168 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEEES-CCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeeeEc-cccHHHHHHHH
Confidence 23345678899999999999999999999999999998655678999999999999985554 99998 59999999999
Q ss_pred HHHHHHHcCCCCeEEEEeeccccCCC-CCC-CCcchhhhhhcccccceEEEEecCCCCc-cccceEEeeeeeecccCCcc
Q 044359 149 LVKDLLKVHKNSLALVLSMEAISSNG-YTG-STKSMLISNTVFRMGGAAILLSNRQQDK-HIAKYKLKHLVRTHMGYDDQ 225 (401)
Q Consensus 149 ~A~~~i~~g~~~~vLvv~~e~~s~~~-~~~-~d~~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~~l~~~~~~~~~~~~~ 225 (401)
+|.++|++|..++||||++|.+|..+ ++. .++.+.....+|||||+|+||++.+... ....+++.+.-... .+++.
T Consensus 169 ~A~~~i~~g~~~~vLvvg~e~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~-~p~~~ 247 (387)
T 3a5r_A 169 LAKDIAENNKGARVLIVCSEMTTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLTVERPIFELVSTAQTI-VPESH 247 (387)
T ss_dssp HHHHHHHHSTTCEEEEEEEECCTTTCCCCCSSCCSSTTHHHHBCCEEEEEEEESSCCTTTCCCCEEEEEEEEEE-CTTCT
T ss_pred HHHHHHHhCCCCEEEEEEEeccchhhcCCCccchhhccccceeccceeEEEEecCCCccccCCceEEEeeeEEE-eCCCh
Confidence 99999999999999999999998844 431 2233344678999999999999865421 11125554321111 11211
Q ss_pred ccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCC
Q 044359 226 AYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGG 305 (401)
Q Consensus 226 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~ 305 (401)
. .+.+... .....+.+.++++....+.+...++.+ ++. .++. + .+|| +|++||+|
T Consensus 248 ~--~~~~~~~-~~g~~~~~~~~v~~~~~~~~~~~i~~~-------L~~------------~gl~-d-~~di-~~v~Hq~~ 302 (387)
T 3a5r_A 248 G--AIEGHLL-ESGLSFHLYKTVPTLISNNIKTCLSDA-------FTP------------LNIS-D-WNSL-FWIAHPGG 302 (387)
T ss_dssp T--SEEEEEE-TTEEEEEECTTHHHHHHHHHHHHHHHH-------HGG------------GTCC-C-GGGS-EEEECCSC
T ss_pred H--hcCceEc-CCCeEEEecchHHHHHHHHHHHHHHHH-------HHh------------cCCC-C-hhhe-eEEECCCC
Confidence 0 0100000 111234555666665544443333221 111 2332 1 4678 89999999
Q ss_pred hHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCC--------CeEEEEeeccchhhcceeee
Q 044359 306 RAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKG--------DRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 306 ~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~G--------d~vll~~~G~G~s~~~~~l~ 377 (401)
+++++.+++.||++++|+..++.++++||||+|||+|++|++++++|+ ++| |+|+|++||+|++|++++||
T Consensus 303 ~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~ 381 (387)
T 3a5r_A 303 PAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSL-ENGQATTGEGLEWGVLFGFGPGITVETVVLR 381 (387)
T ss_dssp HHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEecCcceeeehhhe
Confidence 999999999999999999765578999999999999999999998876 677 99999999999999999999
Q ss_pred eeccC
Q 044359 378 CVSNL 382 (401)
Q Consensus 378 ~~~~~ 382 (401)
|...+
T Consensus 382 ~~~~~ 386 (387)
T 3a5r_A 382 SVPVI 386 (387)
T ss_dssp ECBCC
T ss_pred ecccc
Confidence 98644
No 21
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=100.00 E-value=3.4e-48 Score=386.57 Aligned_cols=348 Identities=16% Similarity=0.223 Sum_probs=256.6
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCC--hhhHHHHHHHHHHcCCCCceecCCCc-cCCCC------CC---
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFD--KESLDFQEKVLEKSGIGDESCIPLNL-HEMQP------DV--- 69 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~--~~~~~~~~~i~~~~GI~~R~~~~~~~-~~~~~------~~--- 69 (401)
.+++|.++|+|+|++. ++|+|+.+.+......+ ++..++.+||++++||++||++.++. ...+| ..
T Consensus 33 ~~~~I~gig~~~P~~~--v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~~~~~ 110 (413)
T 2p0u_A 33 GPATVLAMGKAVPANV--FEQATYPDFFFNITNSNDKPALKAKFQRICDKSGIKKRHFYLDQKILESNPAMCTYMETSLN 110 (413)
T ss_dssp SCCEEEEEEEECCSEE--EEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSSCSEEEESCCHHHHHTCGGGGSSSSSCHH
T ss_pred CCeEEEEEEeeCCCCc--cCHHHHHHHHHHhccccchhhhHHHHHHHHHhcCcCceeEeeChhhhccCcccccccCCChH
Confidence 4689999999999997 99999999875321111 11123467899999999999886531 00000 11
Q ss_pred -ChHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcc-eEEeecccchhHHHHH
Q 044359 70 -SLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIK-SINLSGMGCSAGILSI 147 (401)
Q Consensus 70 -~l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~-~~~i~~~gC~~~~~aL 147 (401)
.+..+.+.+.+|+.+|+++||+++|++++|||.||++|++++..|+.+.+|+++||++..++ +++++ ++|+|++.||
T Consensus 111 ~r~~~~~~~~~~La~~Aa~~aL~~agl~~~dId~li~~t~~~~~~p~~a~~v~~~LGl~~~~~~~~~v~-~aCas~~~AL 189 (413)
T 2p0u_A 111 CRQEIAVAQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLGLRPNVRRVMMYQ-QGAFAGATVL 189 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTCEEEEEES-CCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHCCEEEEEecCCcccCcHHHHHHHHhCCCCCcceEeEEC-CccHHHHHHH
Confidence 23456688999999999999999999999999999998655778999999999999985565 89999 5999999999
Q ss_pred HHHHHHHHcCCCCeEEEEeeccccCCCCCCCC--cchhhhhhcccccceEEEEecCCCCc-cccceEEeeeeeecccCCc
Q 044359 148 SLVKDLLKVHKNSLALVLSMEAISSNGYTGST--KSMLISNTVFRMGGAAILLSNRQQDK-HIAKYKLKHLVRTHMGYDD 224 (401)
Q Consensus 148 ~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~d--~~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~~l~~~~~~~~~~~~ 224 (401)
.+|.++|++|..++||||++|.+|..+..+.+ .++..+..+|||||+|+||++.+... ....+++.+.-.... +.+
T Consensus 190 ~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~-p~~ 268 (413)
T 2p0u_A 190 RVAKDLAENNAGARVLAICSEVTAVTFRAPSETHIDGLVGSALFGDGAAAVIVGSDPRPGIERPIYEMHWAGEMVL-PES 268 (413)
T ss_dssp HHHHHHHHHSTTCEEEEEEEECSTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCSEEEEEEEEEEC-TTC
T ss_pred HHHHHHHHhCCCCEEEEEEEhhcchhccCCCccChhhhcccceeecccEEEEEecCCCccccCCceEEEecccEEe-CCC
Confidence 99999999999999999999999985422232 23344678999999999999865421 111245443211111 111
Q ss_pred cccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCC
Q 044359 225 QAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAG 304 (401)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~ 304 (401)
.. .+.+... .....+.+.++++....+.+...++.+ ++. .++. + .+|| +|++||+
T Consensus 269 ~~--~~~~~~~-~~g~~~~~~~~v~~~~~~~~~~~i~~~-------L~~------------~gl~-d-~~di-~~v~Hq~ 323 (413)
T 2p0u_A 269 DG--AIDGHLT-EAGLVFHLLKDVPGLITKNIGGFLKDT-------KNL------------VGAS-S-WNEL-FWAVHPG 323 (413)
T ss_dssp TT--SSEEEEE-TTEEEEECCSCHHHHHHHHHHHHHHHH-------HHH------------TTCC-S-GGGS-EEEECCS
T ss_pred hh--hcCceEe-cCceEEEeccHHHHHHHHHHHHHHHHH-------HHH------------cCCC-C-ccce-EEEECCC
Confidence 10 0000000 111234455666665544443333221 111 2343 1 4678 8999999
Q ss_pred ChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCC--------CeEEEEeeccchhhcceee
Q 044359 305 GRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKG--------DRVWQIAFGSGFKVNSAVW 376 (401)
Q Consensus 305 ~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~G--------d~vll~~~G~G~s~~~~~l 376 (401)
|+++++.+++.||+|++|+..|+.++++||||+|||+|++|++++++++ ++| |+++|++||+|++|++++|
T Consensus 324 ~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~g~~~d~vll~~fG~G~t~~~~ll 402 (413)
T 2p0u_A 324 GPAILDQVEAKLELEKGKFQASRDILSDYGNMSSASVLFVLDRVRERSL-ESNKSTFGEGSEWGFLIGFGPGLTVETLLL 402 (413)
T ss_dssp SHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEE
T ss_pred CHHHHHHHHHHhCCCHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHhcc-ccCCcccCCCcceEEEEEeCccceeeeeeE
Confidence 9999999999999999999766678999999999999999999999887 888 9999999999999999999
Q ss_pred eee
Q 044359 377 KCV 379 (401)
Q Consensus 377 ~~~ 379 (401)
||.
T Consensus 403 ~~~ 405 (413)
T 2p0u_A 403 RAL 405 (413)
T ss_dssp EEC
T ss_pred EEe
Confidence 996
No 22
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=100.00 E-value=2.8e-48 Score=387.18 Aligned_cols=349 Identities=16% Similarity=0.218 Sum_probs=256.0
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCC--hhhHHHHHHHHHHcCCCCceecCCCcc-CCC---------C--
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFD--KESLDFQEKVLEKSGIGDESCIPLNLH-EMQ---------P-- 67 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~--~~~~~~~~~i~~~~GI~~R~~~~~~~~-~~~---------~-- 67 (401)
.+++|.++|+|+|++. |+|+|+.+.+......+ ++..++.+||++++||++||++.++.. ... +
T Consensus 37 ~~~~I~gig~~lP~~~--v~n~el~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~~~~~ 114 (413)
T 1xes_A 37 GFASILAIGTANPPNA--VDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSL 114 (413)
T ss_dssp SCEEEEEEEEECCSCE--EEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSCCCEEECSCCHHHHHTCHHHHSSSSSCCH
T ss_pred CCeEEEEEeecCCCCc--cCHHHHHHHHHHhccccchhhhHHHHHHHHhhcCcCceEEeeChhhhccCccccccccCCCH
Confidence 4689999999999997 99999999875421111 121235679999999999998765300 000 0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcc-eEEeecccchhHHHH
Q 044359 68 DVSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIK-SINLSGMGCSAGILS 146 (401)
Q Consensus 68 ~~~l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~-~~~i~~~gC~~~~~a 146 (401)
+..+..+.+.+.+|+.+|+++||+++|+++++||+||++|+.++..|+.+.+|+.+||++..+. +++++ ++|+|++.|
T Consensus 115 ~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~-~aCas~~~A 193 (413)
T 1xes_A 115 DARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQ-HGCFAGGTV 193 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTTCEEEEEES-CCTTHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCccchhceec-CccHHHHHH
Confidence 1123456678999999999999999999999999999988655678999999999999985453 99999 599999999
Q ss_pred HHHHHHHHHcCCCCeEEEEeeccccCCC-CCC-CCcchhhhhhcccccceEEEEecCCCCc-cccceEEeeeeeecccCC
Q 044359 147 ISLVKDLLKVHKNSLALVLSMEAISSNG-YTG-STKSMLISNTVFRMGGAAILLSNRQQDK-HIAKYKLKHLVRTHMGYD 223 (401)
Q Consensus 147 L~~A~~~i~~g~~~~vLvv~~e~~s~~~-~~~-~d~~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~~l~~~~~~~~~~~ 223 (401)
|.+|.++|++|..++||||++|.+|..+ ++. .+++...+..+|||||+|+||++.+... ....+++.+.-... .++
T Consensus 194 L~~A~~~i~~G~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~-~p~ 272 (413)
T 1xes_A 194 LRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTV-VPN 272 (413)
T ss_dssp HHHHHHHHHTSTTCCEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTSCCSEEEEEEEEEE-CTT
T ss_pred HHHHHHHHHcCCCCEEEEEEehhhhhhhcCCCccchhhcccceeEecccEEEEEecCCCccccCCceEEEeeeeEE-cCC
Confidence 9999999999999999999999998844 331 1233345678999999999999865421 11125554321111 112
Q ss_pred ccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecC
Q 044359 224 DQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHA 303 (401)
Q Consensus 224 ~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq 303 (401)
+... +.+... .....+.+.++++....+.+...++.+ ++. .++. + .+|| +|++||
T Consensus 273 ~~~~--~~~~~~-~~g~~~~~~~~v~~~~~~~~~~~i~~~-------L~~------------~gl~-d-~~di-~~v~Hq 327 (413)
T 1xes_A 273 SEGA--IGGKVR-EVGLTFQLKGAVPDLISANIENCMVEA-------FSQ------------FKIS-D-WNKL-FWVVHP 327 (413)
T ss_dssp CTTT--EEEEEE-TTEEEEEECTTHHHHHHHHHHHHHHHH-------HGG------------GTCC-C-GGGS-EEEECC
T ss_pred Chhh--cCcEEe-cCceEEEecccHHHHHHHHHHHHHHHH-------HHh------------cCCC-C-ccce-eEEECC
Confidence 1110 000000 111234556666665554443333221 111 2332 1 4677 799999
Q ss_pred CChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCC--------CeEEEEeeccchhhccee
Q 044359 304 GGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKG--------DRVWQIAFGSGFKVNSAV 375 (401)
Q Consensus 304 ~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~G--------d~vll~~~G~G~s~~~~~ 375 (401)
+|+++++.+++.||++++|+..++.++++||||+|||+|++|++++++++ ++| |+++|++||+|++|++++
T Consensus 328 ~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~l 406 (413)
T 1xes_A 328 GGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASL-QNGCSTTGEGLEMGVLFGFGPGLTIETVV 406 (413)
T ss_dssp SCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEE
T ss_pred CCHHHHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEecCCcEEeEEE
Confidence 99999999999999999999765678999999999999999999998876 666 999999999999999999
Q ss_pred eeeec
Q 044359 376 WKCVS 380 (401)
Q Consensus 376 l~~~~ 380 (401)
|||..
T Consensus 407 l~~~~ 411 (413)
T 1xes_A 407 LKSVP 411 (413)
T ss_dssp EEECB
T ss_pred EEecc
Confidence 99973
No 23
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=100.00 E-value=2.6e-48 Score=384.22 Aligned_cols=343 Identities=18% Similarity=0.256 Sum_probs=260.4
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCC----ChHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDV----SLKRSREET 78 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~----~l~~~~~~~ 78 (401)
+++|.++|+|+|++. ++|+|+.+.++... .+.+..++.+||++++||++||++.+. +...... .+..+.+..
T Consensus 9 m~~I~gig~~~P~~~--v~~~~l~~~~~~~~-~~~~~~~~~~~i~~~~GI~~R~~~~~~-~~~~~~~~~~~r~~~~~~~~ 84 (382)
T 1u0m_A 9 MATLCRPSVSVPEHV--ITMEETLELARRRH-TDHPQLPLALRLIENTGVRTRHIVQPI-EDTLEHPGFEDRNKVYEREA 84 (382)
T ss_dssp -CEECCCEEECCSEE--EEHHHHHHHHHHHH-TTCTTHHHHHHHHHHTCCCEEEESSCH-HHHTSCCCHHHHHHHHHHHH
T ss_pred ceEEEEEEEeCCCcc--cCHHHHHHHHHHhc-cChhhHHHHHHHHHhcCCCcceeecCh-hhhccCCChhHHHHHHHHHH
Confidence 379999999999996 99999999876431 112223456789999999999987651 1111111 233456778
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEe-ecccchhHHHHHHHHHHHHHcC
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINL-SGMGCSAGILSISLVKDLLKVH 157 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i-~~~gC~~~~~aL~~A~~~i~~g 157 (401)
.+|+.+|+++||+++|+++++||.||+++++++..|+.+.+|+.+||++.+++++++ + ++|+|++.||..|.++|++|
T Consensus 85 ~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~-~aCss~~~Al~~A~~~i~~g 163 (382)
T 1u0m_A 85 KSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQ-LGCAAGGAAINRAHDFCTAY 163 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEEECS-CGGGHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcceEEccC-CcCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999885446789999999999999866899999 7 69999999999999999999
Q ss_pred CCCeEEEEeeccccCCCCCC-CCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccC
Q 044359 158 KNSLALVLSMEAISSNGYTG-STKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDK 236 (401)
Q Consensus 158 ~~~~vLvv~~e~~s~~~~~~-~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
..++|||+++|.+|..+++. .++++.+..++|||||+|+||++.+.. ++++++.. +...+++..+ +.+....
T Consensus 164 ~~~~vLv~g~e~~s~~~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~~----g~~i~~~~-~~~~~~~~~~--~~~~~~~ 236 (382)
T 1u0m_A 164 PEANALIVACEFCSLCYQPTDLGVGSLLCNGLFGDGIAAAVVRGRGGT----GVRLERNG-SYLIPKTEDW--IMYDVKA 236 (382)
T ss_dssp TTCEEEEEEEEEGGGGCCTTCCSHHHHHHHHHBCEEEEEEEEETTTCS----EEEEEEEE-EEECSSCTTT--EEEEEET
T ss_pred CCCEEEEEEEeccchhcCcccCCHHHhhccchhcCCcEEEEEeccCCC----CcEEEEee-eEecCChHHh--cCceecC
Confidence 99999999999999877652 223344457899999999999976531 34555422 2222333221 1111111
Q ss_pred CCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHHHHHHc
Q 044359 237 DGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEENL 316 (401)
Q Consensus 237 ~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~~~~~l 316 (401)
....+...++++....+.+. .++.. ++. +++. ++|||+|++||.|.++++.+++.|
T Consensus 237 -~g~~~~~~~~v~~~~~~~~~-~i~~a-------L~~------------agl~---~~dId~v~~H~~~~~i~d~~~~~l 292 (382)
T 1u0m_A 237 -TGFHFLLDKRVPATMEPLAP-ALKEL-------AGE------------HGWD---ASDLDFYIVHAGGPRILDDLSTFL 292 (382)
T ss_dssp -TEEEEEECTTTGGGHHHHHH-HHHHH-------HHT------------TSCC---SSCCSCCEEECSHHHHHHHHHHHS
T ss_pred -CceEEEeCcHHHHHHHHHHH-HHHHH-------HHH------------cCCC---HHHCCEEEECCCCHHHHHHHHHHc
Confidence 11123344555554333222 22211 110 3565 789999999999999999999999
Q ss_pred CCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeecc
Q 044359 317 KLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSN 381 (401)
Q Consensus 317 gi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~ 381 (401)
|++++|+..++.++++||||++||+|++|+++++++++++||++++++||+|++|++++|||..+
T Consensus 293 gl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~vl~~~~~ 357 (382)
T 1u0m_A 293 EVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEGARGLLAGFGPGITAEMSLGCWQTA 357 (382)
T ss_dssp CSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCCCCSSCCCEEEEEETTTEEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcCCCCCCEEEEEEEcccceeEEEEEEEeec
Confidence 99999997666789999999999999999999999999999999999999999999999999754
No 24
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=100.00 E-value=7.3e-48 Score=383.18 Aligned_cols=350 Identities=16% Similarity=0.209 Sum_probs=255.1
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCC-hhh-HHHHHHHHHHcCCCCceecCCCc-cC-----C-CCCC----
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFD-KES-LDFQEKVLEKSGIGDESCIPLNL-HE-----M-QPDV---- 69 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~-~~~-~~~~~~i~~~~GI~~R~~~~~~~-~~-----~-~~~~---- 69 (401)
+++|.++|+|+|++. |+|+|+.+.+......+ .++ .+..+||++++||++||++.++. .. . ....
T Consensus 21 ~~~I~gig~~~P~~~--v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~p~~~d~~~~~~~~ 98 (402)
T 1ee0_A 21 LATILAIGTATPPNC--VAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKKRYLALTEDYLQENPTMCEFMAPSLNA 98 (402)
T ss_dssp CCEEEEEEEECCSCE--EEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHSGGGGSTTSSCHHH
T ss_pred CcEEEEeeecCCCcc--cCHHHHHHHHHHhhcccchhhhHHHHHHHHHhcCccceeEecCchhhccCcccccccCCCHHH
Confidence 579999999999997 99999999874321111 111 23567899999999999886531 00 0 0011
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcc-eEEeecccchhHHHHHH
Q 044359 70 SLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIK-SINLSGMGCSAGILSIS 148 (401)
Q Consensus 70 ~l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~-~~~i~~~gC~~~~~aL~ 148 (401)
....+.+.+.+|+.+|+++||+++|++++|||+||++|++++..|+.+.+|+++||++..+. +++++ ++|+|++.||.
T Consensus 99 r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~-~aCss~~~al~ 177 (402)
T 1ee0_A 99 RQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPSVKRYMLYQ-QGAAAGGTVLR 177 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSCCEESCHHHHHHHHHTCCTTCEEEEECS-CCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCChHHHHHHHHcCcCCCcceeeEEC-chhHHHHHHHH
Confidence 23345678899999999999999999999999999998655678999999999999985554 99998 59999999999
Q ss_pred HHHHHHHcCCCCeEEEEeeccccCCC-CCC-CCcchhhhhhcccccceEEEEecCCCCc-cccceEEeeeeeecccCCcc
Q 044359 149 LVKDLLKVHKNSLALVLSMEAISSNG-YTG-STKSMLISNTVFRMGGAAILLSNRQQDK-HIAKYKLKHLVRTHMGYDDQ 225 (401)
Q Consensus 149 ~A~~~i~~g~~~~vLvv~~e~~s~~~-~~~-~d~~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~~l~~~~~~~~~~~~~ 225 (401)
+|.++|++|..++||||++|.+|..+ ++. .++.+.....+|||||+|+||++.+... ....+++.+.-.... +.+.
T Consensus 178 ~A~~~i~~g~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~-p~~~ 256 (402)
T 1ee0_A 178 LAKDLAENNKGSRVLIVCSEITAILFHGPNENHLDSLVAQALFGDGAAALIVGSGPHLAVERPIFEIVSTDQTIL-PDTE 256 (402)
T ss_dssp HHHHHHHHSTTCCEEEEEEECGGGGCCCCCTTCHHHHHHTTTBCCEEEEEEEESSCCTTTCCCCEEEEEEEEEEC-TTCG
T ss_pred HHHHHHHcCCCCEEEEEEEeccchhhcCCcccchhhhccceeEecceEEEEEecCCCccccCCceEEEeeeeEEc-CCch
Confidence 99999999999999999999999843 432 2333345678999999999999865421 111255543221111 1111
Q ss_pred ccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCC
Q 044359 226 AYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGG 305 (401)
Q Consensus 226 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~ 305 (401)
+.+.+... .....+.+.++++....+.+...++.+ ++. .++. + .+|| +|++||+|
T Consensus 257 --~~~~~~~~-~~g~~~~~~~~v~~~~~~~~~~~i~~~-------L~~------------~gl~-d-~~di-~~v~Hq~~ 311 (402)
T 1ee0_A 257 --KAMKLHLR-EGGLTFQLHRDVPLMVAKNIENAAEKA-------LSP------------LGIT-D-WNSV-FWMVHPGG 311 (402)
T ss_dssp --GGEEEEEE-TTEECCEECTTHHHHHHHHHHHHHHHH-------HGG------------GTCC-C-GGGS-EEEECCSS
T ss_pred --HhcCceec-cCceEEEecchHHHHHHHHHHHHHHHH-------HHH------------cCCC-c-cccc-eEEECCCC
Confidence 00100000 011124445566555444333332221 111 2332 1 4678 89999999
Q ss_pred hHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCC--------CeEEEEeeccchhhcceeee
Q 044359 306 RAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKG--------DRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 306 ~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~G--------d~vll~~~G~G~s~~~~~l~ 377 (401)
+++++.+++.||++++|+..++.++++||||+|||+|++|++++++|+ ++| |+|+|++||+|++|++++||
T Consensus 312 ~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~ 390 (402)
T 1ee0_A 312 RAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSM-AEGKSTTGEGLDCGVLFGFGPGMTVETVVLR 390 (402)
T ss_dssp HHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTBTTBSEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHHHcCCChHHhHHHHHHHHhcCCchhhHHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEecCCcEEEEEEEE
Confidence 999999999999999999765578999999999999999999998876 667 99999999999999999999
Q ss_pred eeccC
Q 044359 378 CVSNL 382 (401)
Q Consensus 378 ~~~~~ 382 (401)
|....
T Consensus 391 ~~~~~ 395 (402)
T 1ee0_A 391 SVRVT 395 (402)
T ss_dssp ECBCC
T ss_pred Eeccc
Confidence 97543
No 25
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=100.00 E-value=1.4e-47 Score=381.69 Aligned_cols=347 Identities=18% Similarity=0.190 Sum_probs=254.9
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCC-hhh-HHHHHHHHHHcCCCCceecCCCc-cCCCC------CC---
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFD-KES-LDFQEKVLEKSGIGDESCIPLNL-HEMQP------DV--- 69 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~-~~~-~~~~~~i~~~~GI~~R~~~~~~~-~~~~~------~~--- 69 (401)
.+++|.++|+|+|++. |+|+|+.+.+......+ .++ .++.+|+++++||++||++.++. ....+ ..
T Consensus 28 ~~~~I~~ig~~~P~~~--v~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~~~~~ 105 (406)
T 2d3m_A 28 GTATVMAIGTAHPPHI--FPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGKRYFNYDEEFLKKYPNITSYDEPSLN 105 (406)
T ss_dssp SCCEEEEEEEECCSEE--EEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEEEESCCHHHHTTCTTTSSSSSSCHH
T ss_pred CCeEEEEEeecCCCCc--cCHHHHHHHHHHhccccchhhHHHHHHHHHhccCCcceEEeeChhhhccCcccccccCCChH
Confidence 3689999999999997 99999999874321111 112 23467899999999999886531 00001 01
Q ss_pred -ChHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcc-eEEeecccchhHHHHH
Q 044359 70 -SLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIK-SINLSGMGCSAGILSI 147 (401)
Q Consensus 70 -~l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~-~~~i~~~gC~~~~~aL 147 (401)
....+.+.+.+|+.+|+++||+++|+++++||+||++|++++..|+.+.+|+++||++..++ +++++ ++|+|++.||
T Consensus 106 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~-~aC~s~~~al 184 (406)
T 2d3m_A 106 DRQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGVDMPSADFQCAKLLGLHANVNKYCIYM-QGAYAGGTVM 184 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEEES-CGGGHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCcCCCcceeeeEc-CccHHHHHHH
Confidence 23445678899999999999999999999999999998655678999999999999985565 89999 5999999999
Q ss_pred HHHHHHHHcCCCCeEEEEeeccccCCC-CCCCC--cchhhhhhcccccceEEEEecCCCCc-cccceEEeeeeeecccCC
Q 044359 148 SLVKDLLKVHKNSLALVLSMEAISSNG-YTGST--KSMLISNTVFRMGGAAILLSNRQQDK-HIAKYKLKHLVRTHMGYD 223 (401)
Q Consensus 148 ~~A~~~i~~g~~~~vLvv~~e~~s~~~-~~~~d--~~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~~l~~~~~~~~~~~ 223 (401)
.+|.++|++|..++|||+++|.+|..+ ++ .| +.+..+..+|||||+|+||++.+... ....+++.+.-..++ ++
T Consensus 185 ~~A~~~i~~g~~~~vLvvg~E~~s~~~~~~-~d~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~l~~~~~~~~-p~ 262 (406)
T 2d3m_A 185 RYAKDLAENNRGARVLVVCAELTIMMLRAP-NETHLDNAIGISLFGDGAAALIIGSDPIIGVEKPMFEIVCTKQTVI-PN 262 (406)
T ss_dssp HHHHHHHHTSTTCEEEEEEEECGGGTCCCC-CSTTHHHHHHHTTBCCEEEEEEEESSCCTTTCCCCEEEEEEEEEEC-TT
T ss_pred HHHHHHHHcCCCCEEEEEEEEecchheeCC-cccchhhhhccceeccceEEEEEecCCCCccCCCceEEEecccEEc-CC
Confidence 999999999999999999999999844 43 33 32344678999999999999865421 011255543222112 11
Q ss_pred ccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcce----E
Q 044359 224 DQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEH----F 299 (401)
Q Consensus 224 ~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~----~ 299 (401)
+.. .+.+... .....+.+.++++....+.+...++.. ++. +++. ++ ||+ |
T Consensus 263 ~~~--~~~~~~~-~~g~~~~~~~~v~~~~~~~~~~~i~~~-------L~~------------agl~---~~-id~~di~~ 316 (406)
T 2d3m_A 263 TED--VIHLHLR-ETGMMFYLSKGSPMTISNNVEACLIDV-------FKS------------VGIT---PP-EDWNSLFW 316 (406)
T ss_dssp CTT--TEEEEEE-TTEEEEEECTTHHHHHHHHHHHHHHHH-------HHT------------TTCC---CC-SSGGGSEE
T ss_pred Cch--hcceeec-cCceEEEeCchHHHHHHHHHHHHHHHH-------HHh------------cCCC---CC-CCccceEE
Confidence 110 0000000 011123445566655444333322211 111 2454 45 666 9
Q ss_pred eecCCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCC--------CeEEEEeeccchhh
Q 044359 300 CIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKG--------DRVWQIAFGSGFKV 371 (401)
Q Consensus 300 i~Hq~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~G--------d~vll~~~G~G~s~ 371 (401)
++||+|.++++.+++.||++++|+..|+.++++||||++||+|++|++++++|+ ++| |+|++++||+|++|
T Consensus 317 v~Hq~~~~i~~~~~~~lgl~~~k~~~s~~~l~~~GNt~sAsi~~~L~~~~~~g~-~~G~~~~g~~~d~vll~~fG~G~t~ 395 (406)
T 2d3m_A 317 IPHPGGRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSA-AKGLETYGEGLEWGVLLGFGPGITV 395 (406)
T ss_dssp EECCSCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEE
T ss_pred EECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHHhcc-ccCCCccCCCcceEEEEEeccchhh
Confidence 999999999999999999999999765678999999999999999999999887 888 99999999999999
Q ss_pred cceeeeeec
Q 044359 372 NSAVWKCVS 380 (401)
Q Consensus 372 ~~~~l~~~~ 380 (401)
++++|||..
T Consensus 396 ~~~ll~~~~ 404 (406)
T 2d3m_A 396 ETILLHSLP 404 (406)
T ss_dssp EEEEEEECB
T ss_pred hhHHhhhcc
Confidence 999999974
No 26
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.2e-47 Score=368.67 Aligned_cols=319 Identities=14% Similarity=0.184 Sum_probs=245.7
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
.+++|.++|+|+|++. ++|+|+.+.++. ++ +|+.+++||++||++.++ ...+|
T Consensus 4 m~~~I~g~g~~~P~~~--~~~~~~~~~~~~----~~------~~i~~~~Gi~~R~~~~~~---------------~~~~l 56 (331)
T 2x3e_A 4 RAAVVCGLGSYLPEAV--LSNDMLAAELDT----SD------AWISSRTGVRQRHIAGDL---------------GSGDL 56 (331)
T ss_dssp CEEEEEEEEEECCSCE--EEHHHHHHHTTC----CH------HHHHHHHCCCEEECCTTC---------------CHHHH
T ss_pred ceeEEEEEEEECCCcE--ecHHHHHHHhCC----CH------HHHHHhhCceEEEecCCC---------------CHHHH
Confidence 3689999999999996 999999987542 22 588999999999987651 15799
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNS 160 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~ 160 (401)
+.+|+++||+++|+ ++||.||++|+ +++..|+.+.+++.+||++ ++++++++ .+|+|++.||..|.++|++|..+
T Consensus 57 a~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~-~aCas~~~Al~~A~~~i~~g~~~ 132 (331)
T 2x3e_A 57 ALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLV-GALAFDLS-AAATGFVYGLASVGSLISAGLAD 132 (331)
T ss_dssp HHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCT-TSEEEEEE-CGGGHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCC-CCcEEEEc-CcChHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999 89999999874 5666888999999999998 48999999 59999999999999999999999
Q ss_pred eEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCe
Q 044359 161 LALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNV 240 (401)
Q Consensus 161 ~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 240 (401)
+|||+++|.+|..+++ .|+. +..+|||||+|+||++.+.... .+++ .+.+.+++..++.+..+.++.
T Consensus 133 ~vLv~g~e~~s~~~~~-~d~~---~~~~~GdGA~A~vL~~~~~a~~---~~i~---~~~~~~dg~~~~~~~~p~~~~--- 199 (331)
T 2x3e_A 133 SALLVGVDTFSHTLDP-ADRS---TRALFGDGAGAVVLRAGDAEEE---GALL---AFDLGSDGHQFDLLMTPAVSR--- 199 (331)
T ss_dssp EEEEEEEECGGGGSCT-TCHH---HHHHBCCEEEEEEEEEECTTST---TBEE---EEEEEECGGGTTSEEEECCCH---
T ss_pred EEEEEEeeccccCCCc-cccc---cceeeccccEEEEEEecCCCCC---CceE---EEEEEEcCCCCCeEEecCCCC---
Confidence 9999999999887765 5555 5689999999999998652110 1222 333445555444333321100
Q ss_pred eeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhh----c--cCCCcchhhhcceEeecCCChHHHHHHHH
Q 044359 241 GVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKK----S--KTYVPNFKKAFEHFCIHAGGRAIIDAVEE 314 (401)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l--~~l~~~~~~did~~i~Hq~~~~~~~~~~~ 314 (401)
. .|.. . .......+++.+.++++.+.++++ + +++. ++|||+|++||.|.++++.+.+
T Consensus 200 ~------~p~~----~----~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~---~~did~~~~H~~~~~~~d~~~~ 262 (331)
T 2x3e_A 200 A------ERSS----G----QASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQ---ASDLHHLVPHQANTRILAAVAD 262 (331)
T ss_dssp H------HHHH----T----CCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCC---GGGCSEEEECCCCHHHHHHHHH
T ss_pred C------CCCc----c----CcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEEcCCCHHHHHHHHH
Confidence 0 0000 0 000001122223333333322222 2 3665 7999999999999999999999
Q ss_pred HcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccCCc
Q 044359 315 NLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDP 384 (401)
Q Consensus 315 ~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~ 384 (401)
.||++++|+. .++++|||+++||+|++|+++++++++++||++++++||+|++|++++|||.+-+++
T Consensus 263 ~lg~~~~~~~---~~~~~~Gnt~sAs~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~~l~~~~~~~~ 329 (331)
T 2x3e_A 263 QLDLPVERVV---SNIAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALRWPKIVPT 329 (331)
T ss_dssp HHTCCGGGBC---CCHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEECCCCCC-
T ss_pred HcCCCHHHHh---hhHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEeHHhhheeeEEEECCcccC
Confidence 9999999994 578999999999999999999999999999999999999999999999999765554
No 27
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=100.00 E-value=9.3e-47 Score=367.39 Aligned_cols=309 Identities=18% Similarity=0.216 Sum_probs=242.1
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
.+++|.|+|+|+|++. ++|+++.+.++ .++ +|+.+++||++||++.++. ...+|
T Consensus 10 ~~~~I~gig~~~P~~~--~~~~~~~~~~~----~~~------~~i~~~~Gi~~R~~~~~~~--------------~~~~l 63 (339)
T 1mzj_A 10 RFSRVLGVGSYRPRRE--VSNKEVCTWID----STE------EWIETRTGIRSRRIAEPDE--------------TIQVM 63 (339)
T ss_dssp CEEEEEEEEEECCSCE--EEHHHHTTTSS----CCH------HHHHHHHCCSEEECCCTTC--------------CHHHH
T ss_pred CceEEEEEEEeCCCcc--ccHHHHHHHhC----CCH------HHHHHhcCceEEEEeCCCC--------------CHHHH
Confidence 4689999999999997 99999987542 122 5888999999999886432 25799
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNS 160 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~ 160 (401)
+.+|+++||+++|+++++||.||++++ +++..|+.+.+++.+||++ ++++++++ ++|+|++.||..|.++|++|..+
T Consensus 64 a~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~-~aCas~~~Al~~A~~~i~~G~~~ 141 (339)
T 1mzj_A 64 GVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGAD-NAGGFDLS-AACAGFCHALSIAADAVESGGSR 141 (339)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCT-TCEEEEEE-CGGGHHHHHHHHHHHHHHHSSCS
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCC-CccEEEcc-ccchHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999999874 6777899999999999998 48999999 59999999999999999999999
Q ss_pred eEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCcccccccccc---ccC-
Q 044359 161 LALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQ---QDK- 236 (401)
Q Consensus 161 ~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~- 236 (401)
+|||+++|.+|..+++ .|+. +.++|||||+|+||++.+.. +++.+.+.+++..++.+..+ +..
T Consensus 142 ~vLv~g~e~~s~~~~~-~d~~---~~~~~GdGA~A~vL~~~~~~---------~i~~~~~~~~g~~~~~~~~~g~~p~~~ 208 (339)
T 1mzj_A 142 HVLVVATERMTDVIDL-ADRS---LSFLFGDGAGAAVVGPSDVP---------GIGPVVRGIDGTGLGSLHMSSSWDQYV 208 (339)
T ss_dssp CEEEEEEEEGGGGSCS-SCTT---TTTTBCEEEEEEEEEEESSC---------CBCCCEEEECGGGGGGEEESCCHHHHT
T ss_pred EEEEEEEcccccccCc-cccc---cceEeccCceEEEEEecCCC---------CeEEEEEEEcCCCCCeEEecCCCCCcc
Confidence 9999999999887665 4554 46899999999999986532 12222333455444433321 000
Q ss_pred C---CCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHH----HHhhhc--cCCCcchhhhcceEeecCCChH
Q 044359 237 D---GNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWS----VVCKKS--KTYVPNFKKAFEHFCIHAGGRA 307 (401)
Q Consensus 237 ~---g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l--~~l~~~~~~did~~i~Hq~~~~ 307 (401)
. ...++ + .+++.+.+++..+ .+.+.+ +++. ++|||+|++||.|.+
T Consensus 209 ~~~~~~~~~-~----------------------~~~g~~v~~~~~~~~~~~i~~aL~~agl~---~~did~v~~H~~~~~ 262 (339)
T 1mzj_A 209 EDPSVGRPA-L----------------------VMDGKRVFRWAVADVVPAAREALEVAGLT---VGDLVAFVPHQANLR 262 (339)
T ss_dssp TCSSSCSCC-E----------------------EECHHHHHHHHHHHHHHHHHHHHHTTTCC---GGGCSEEEECCSCHH
T ss_pred cccccccce-E----------------------EeeCHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEECCCCHH
Confidence 0 00000 0 0111122222222 222223 3565 799999999999999
Q ss_pred HHHHHHHHcCCCch-hhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeec
Q 044359 308 IIDAVEENLKLSKE-DGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVS 380 (401)
Q Consensus 308 ~~~~~~~~lgi~~e-~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~ 380 (401)
+++.+.+.||++++ ++. .++++|||+++||+|++|++++++|++++||++++++||+|++|++++|||.+
T Consensus 263 ~~d~i~~~lg~~~~~~~~---~~~~~~Gn~~sAs~~~~L~~~~~~g~~~~G~~vll~~~G~G~t~~~~~l~~~~ 333 (339)
T 1mzj_A 263 IIDVLVDRLGVPEHVVVS---RDAEDTGNTSSASVALALDRLVRSGAVPGGGPALMIGFGAGLSYAGQALLLPD 333 (339)
T ss_dssp HHHHHHHHHTCCTTSEEC---CTHHHHCBCTTHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEECCC
T ss_pred HHHHHHHHhCCCccceee---ehhhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEeCC
Confidence 99999999999999 884 56899999999999999999999999999999999999999999999999964
No 28
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=100.00 E-value=2.3e-46 Score=361.17 Aligned_cols=305 Identities=19% Similarity=0.248 Sum_probs=240.6
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
+++|.++|+|+|++. ++|+|+.+.++ .++ +|+.+++||++||++.++. ...+|+
T Consensus 2 ~~~I~~~g~~~P~~~--~~~~~~~~~~~----~~~------~~i~~~~Gi~~r~~~~~~~--------------~~~~l~ 55 (317)
T 1hnj_A 2 YTKIIGTGSYLPEQV--RTNADLEKMVD----TSD------EWIVTRTGIRERHIAAPNE--------------TVSTMG 55 (317)
T ss_dssp EEEEEEEEEECCSEE--EEHHHHHTTSS----CCH------HHHHHHHCCCEEEECCTTC--------------CHHHHH
T ss_pred CcEEEEEEEeCCCce--ecHHHHHHHhC----CCH------HHHHHHhCceEEEecCCCC--------------CHHHHH
Confidence 589999999999996 99999987532 222 5788999999999985532 257999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
.+|+++||+++|+++++||.|++++ ++++..|+.+.+++.+||++ +.++++++ .+|+|++.||..|.++|++|..++
T Consensus 56 ~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~-~aCas~~~al~~A~~~i~~g~~~~ 133 (317)
T 1hnj_A 56 FEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK-GCPAFDVA-AACAGFTYALSVADQYVKSGAVKY 133 (317)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC-SSCEEEEC-CGGGHHHHHHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCeEEeeC-cccHHHHHHHHHHHHHHHCCCCCE
Confidence 9999999999999999999999887 46777899999999999997 48999998 699999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCC---
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDG--- 238 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g--- 238 (401)
|||+++|.+|..+++ .++. +.++|||||+|+||++.+.. +++...+.+++..++.+..+. +..
T Consensus 134 vlv~g~e~~s~~~~~-~d~~---~~~~~GdGA~A~vL~~~~~~---------~i~~~~~~~~g~~~~~~~~~~-~~~~~~ 199 (317)
T 1hnj_A 134 ALVVGSDVLARTCDP-TDRG---TIIIFGDGAGAAVLAASEEP---------GIISTHLHADGSYGELLTLPN-ADRVNP 199 (317)
T ss_dssp EEEEEEECHHHHSCT-TCHH---HHTTBCCEEEEEEEEEESSC---------SEEEEEEEECGGGGGGEECCC-CCSSCT
T ss_pred EEEEEechhcccCCc-hhcc---cceeeccccEEEEEEecCCC---------ceeeEEEEEcCCCCCeEEECC-CCCCCC
Confidence 999999999887665 4554 46899999999999986532 122222334554444443322 100
Q ss_pred -CeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHH----HHHhhhc--cCCCcchhhhcceEeecCCChHHHHH
Q 044359 239 -NVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLW----SVVCKKS--KTYVPNFKKAFEHFCIHAGGRAIIDA 311 (401)
Q Consensus 239 -~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l--~~l~~~~~~did~~i~Hq~~~~~~~~ 311 (401)
..++ +.. ++.+.+++.. +.+.+.+ +++. ++|||+|++||.|.++++.
T Consensus 200 ~~~~~-~~~----------------------~g~~~~~~~~~~~~~~i~~aL~~agl~---~~did~v~~H~~~~~~~d~ 253 (317)
T 1hnj_A 200 ENSIH-LTM----------------------AGNEVFKVAVTELAHIVDETLAANNLD---RSQLDWLVPHQANLRIISA 253 (317)
T ss_dssp TSCCS-CEE----------------------CHHHHHHHHHHHHHHHHHHHHHHTTCC---GGGCCEEEECCSCHHHHHH
T ss_pred CCCce-EEe----------------------cCHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEEcCCCHHHHHH
Confidence 0000 000 1111111111 1222222 3565 7999999999999999999
Q ss_pred HHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeee
Q 044359 312 VEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 312 ~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
+.+.||++++++ +.++.+|||+++||+|++|++++++|++++||++++++||+|++|++++|||
T Consensus 254 i~~~lg~~~~~~---~~~~~~~Gn~~~As~~~~L~~~~~~~~~~~G~~vll~~~G~G~t~~~~~l~~ 317 (317)
T 1hnj_A 254 TAKKLGMSMDNV---VVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF 317 (317)
T ss_dssp HHHHTTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHcCCCHHHh---HhhHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhheeEEEEEEC
Confidence 999999999998 4689999999999999999999999999999999999999999999999997
No 29
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=100.00 E-value=1.4e-46 Score=371.21 Aligned_cols=306 Identities=13% Similarity=0.157 Sum_probs=234.6
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
+++|.++|+|+|++. |+|+|+.+..+ .++ +|+...+||++|+++.+++ ++.+|+
T Consensus 7 ~v~I~~~g~y~P~~~--v~~~~l~~~~g----~~~------~~~~~~~Gi~~r~~~~~~e--------------~~~~La 60 (388)
T 3v4n_A 7 TIGIDKISFFVPPYY--IDMTALAEARN----VDP------GKFHIGIGQDQMAVNPISQ--------------DIVTFA 60 (388)
T ss_dssp CEEEEEEEEECCSEE--EEHHHHHHHTT----SCT------HHHHTTTCCCEEECCCTTC--------------CHHHHH
T ss_pred eEEEEEEEEECCCeE--EcHHHHHHHhC----CCH------HHHHHHhCceEEEECCCCC--------------CHHHHH
Confidence 799999999999996 99999998754 233 4677889999999987643 267999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
.+|+++||++++ +++||+||++| ++++..|+.+..|+++||++++++++|++ ++|+|++.||.+|.++|++|+.++
T Consensus 61 ~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~-~aC~gg~~AL~~A~~~i~sg~~~~ 137 (388)
T 3v4n_A 61 ANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIK-EAXYGATAGLQLAKNHVALHPDKK 137 (388)
T ss_dssp HHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEE-SGGGHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCceEeehh-hhhhHHHHHHHHHHHHHhcCCCCE
Confidence 999999999987 99999999997 56777999999999999998669999999 599999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccc--cccccCCCC
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSV--FQQQDKDGN 239 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~g~ 239 (401)
||||++|.+|..+++ ++ ..+|||||+|+||++++.. +. ....+++...+.+ +.+.+ ...
T Consensus 138 vLVvg~e~~s~~~~~-~~------~~lfGDGA~A~ll~~~~~i-----l~------~~~~~~~~~~~~~df~~p~~-~~~ 198 (388)
T 3v4n_A 138 VLVVAADIAKYGLNS-GG------EPTQGAGAVAMLVSSEPRI-----LA------LKEDNVMLTQDIYDFWRPTG-HPY 198 (388)
T ss_dssp EEEEEEEEECCCTTC-TT------GGGCEEEEEEEEEEESCSS-----EE------ECSCCEEEECCCCSEECBTT-CSS
T ss_pred EEEEEehhhcccCCC-CC------CCccccceeEEEeecCCCc-----eE------EeccccccchhccccccCCC-CCC
Confidence 999999999987753 33 3789999999999987532 11 1111222211111 22221 110
Q ss_pred eeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcceEeecCCC--------hHHH
Q 044359 240 VGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEHFCIHAGG--------RAII 309 (401)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~~i~Hq~~--------~~~~ 309 (401)
. .. +... .++.+++.+ .. .+.+.+ .++. .+|||+|++||++ ++++
T Consensus 199 ~--~~--~g~~----~~~~~~~~~-----------~~---~~~~~l~~~g~~---~~did~~v~Hqp~~k~~~ka~~ril 253 (388)
T 3v4n_A 199 P--MV--DGPL----SNETYIQSF-----------AQ---VWDEHKKRTGLD---FADYDALAFHIPYTKMGKKALLAKI 253 (388)
T ss_dssp C--EE--CHHH----HHHHHHHHH-----------HH---HHHHHHHHHCCC---GGGCSEEEECCSSHHHHHHHHHHHS
T ss_pred c--ee--ccHh----HHHHHHHHH-----------HH---HHHHHHHHhCCC---HHHCCEEEeCCCcchHHHHHHHHHH
Confidence 0 00 0001 111111110 01 111111 3555 7999999999954 5556
Q ss_pred ----HHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHc-CCCCCCCeEEEEeeccchhhcceeeeeeccCCc
Q 044359 310 ----DAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAK-GKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDP 384 (401)
Q Consensus 310 ----~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~-g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~ 384 (401)
+.+.+.|+++.+|. +.++++||||++||+|++|++++++ |++++||+|+|++||+|++++.+.++++.....
T Consensus 254 ~~~~~~~~~~l~~~~e~~---~~~~~~~GN~~sASi~l~L~~~l~~~g~~~~Gd~ill~s~GsG~~ae~~~~~v~~~~~~ 330 (388)
T 3v4n_A 254 SDQTEAEQERILARYEES---IIYSRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGAVAEFFTGELVAGYQN 330 (388)
T ss_dssp TTSCHHHHHHHHHHHHHH---TTTGGGTCCCGGGHHHHHHHHHHHHCSSCCTTCEEEEEEEETTTEEEEEEEEECTTGGG
T ss_pred hcccHHHHHHhCCCHHHH---hhHHHhcCchHHHHHHHHHHHHHHhcCcCCCCCEEEEEEecCcceeEEEEEEEccCHHH
Confidence 67788999999998 6799999999999999999999998 899999999999999999999999999876543
No 30
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=100.00 E-value=4.8e-45 Score=351.30 Aligned_cols=307 Identities=18% Similarity=0.322 Sum_probs=242.8
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
+++|.++|+|+|++. ++|+|+.+.++ .++ +|+.+++||++|+++.++. ...+|+
T Consensus 2 ~~~I~~~g~~~P~~~--~~~~~~~~~~~----~~~------~~i~~~~gi~~r~~~~~~~--------------~~~~l~ 55 (313)
T 1zow_A 2 NVGIKGFGAYAPEKI--IDNAYFEQFLD----TSD------EWISKMTGIKERHWADDDQ--------------DTSDLA 55 (313)
T ss_dssp CEEEEEEEEECCSCE--EEGGGGGGTSS----CCH------HHHHHHHCCSEEECCCTTC--------------CHHHHH
T ss_pred ceEEEEEEEECCCcc--ccHHHHHHhcC----CCH------HHHHHhhCceEEEecCCCC--------------CHHHHH
Confidence 589999999999997 99999987532 222 5788999999999875532 257999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
.+|+++||+++|+++++||.|+++++ +++..|+.+.+++.+||++ .+++++++ .+|+|++.||..|.++|++|..++
T Consensus 56 ~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~-~aCas~~~al~~A~~~i~~g~~~~ 133 (313)
T 1zow_A 56 YEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTG-KVASMDQL-AACSGFMYSMITAKQYVQSGDYHN 133 (313)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCC-SCCEEEEE-CGGGHHHHHHHHHHHHHHTTSCSC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEEEEC-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 99999999999999999999999874 6677899999999999997 48999998 699999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCee
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVG 241 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (401)
|||+++|.+|..+++ .++. ..++|||||+|+||++.+... +++ ...+.+++...+.+..+. ... .
T Consensus 134 vLv~g~e~~s~~~~~-~d~~---~~~~~gdGa~A~vl~~~~~~~-----~i~---~~~~~~~g~~~~~~~~~~-~~~--~ 198 (313)
T 1zow_A 134 ILVVGADKLSKITDL-TDRS---TAVLFGDGAGAVIIGEVSEGR-----GII---SYEMGSDGTGGKHLYLDK-DTG--K 198 (313)
T ss_dssp EEEEEEEEGGGTCCT-TCHH---HHTTBCEEEEEEEEEECSTTC-----EEE---EEEEEECGGGGGGEEECT-TTC--C
T ss_pred EEEEEEcccccccCc-cccc---ceeeeccceEEEEEEecCCCC-----cee---EEEEEEcCCCcCeEEecC-CCC--e
Confidence 999999999887765 4554 578999999999999876431 222 233344555444444332 001 1
Q ss_pred eEe-ccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcceEeecCCChHHHHHHHHHcCC
Q 044359 242 VSI-SRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKL 318 (401)
Q Consensus 242 ~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi 318 (401)
+.. .++++....+.+. ..+.+.+ +++. ++|||+|++||.+.++++.+.+.||+
T Consensus 199 ~~~~g~~~~~~~~~~~~---------------------~~i~~al~~agl~---~~did~~~~H~~~~~~~d~~~~~lg~ 254 (313)
T 1zow_A 199 LKMNGREVFKFAVRIMG---------------------DASTRVVEKANLT---SDDIDLFIPHQANIRIMESARERLGI 254 (313)
T ss_dssp EEECHHHHHHHHHHHHH---------------------HHHHHHHHHTTCC---GGGCSEEEECCSCHHHHHHHHHHHTC
T ss_pred eEeccHHHHHHHHHHHH---------------------HHHHHHHHHcCCC---HHHCCEEEEcCCCHHHHHHHHHHhCC
Confidence 111 1111111111111 1122222 3665 79999999999999999999999999
Q ss_pred CchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeee
Q 044359 319 SKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCV 379 (401)
Q Consensus 319 ~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~ 379 (401)
+++++. .++.+|||+++||+|++|.++++++++++||++++++||+|++|++++|||.
T Consensus 255 ~~~~~~---~~~~~~Gh~~~as~~~~L~~~~~~~~~~~g~~vl~~~~G~G~t~~~~~l~~~ 312 (313)
T 1zow_A 255 SKDKMS---VSVNKYGNTSAASIPLSIDQELKNGKLKDDDTIVLVGFGGGLTWGAMTIKWG 312 (313)
T ss_dssp CGGGBC---CCHHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEECC
T ss_pred CHHHHH---HhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheEEEEEeC
Confidence 999984 5789999999999999999999999999999999999999999999999994
No 31
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=100.00 E-value=2.7e-46 Score=371.89 Aligned_cols=306 Identities=15% Similarity=0.178 Sum_probs=231.7
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
+++|.++|+|+|++. |+|+|+.+..+ .++ +|+...+||++|+++.+++ ++.+|+
T Consensus 36 ~v~I~~ig~ylP~~~--v~n~el~~~~g----~~~------~~i~~~~Gi~~r~~a~~~e--------------~~~~La 89 (425)
T 3sqz_A 36 RIGIDKIGFTSSQYV--LNMKDLAEARG----EDP------QKFSKGLLLNALSIAPITD--------------DVVTLA 89 (425)
T ss_dssp CEEEEEEEEECCSEE--EEHHHHHHHHT----CCH------HHHHTTTCCCEEEECCTTS--------------CHHHHH
T ss_pred eEEEEEEEEECCCcE--EcHHHHHHHhC----CCH------HHHHHHcCeEEEEECCCCC--------------CHHHHH
Confidence 789999999999996 99999998765 233 5778899999999987643 267999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
.+|+++||+++| ++|||+||++| ++++..|+.++.|+++||++++++++|++ .+|+|++.||.+|.++|++|+.++
T Consensus 90 ~~Aa~~aL~~ag--~~dId~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~-~aC~gg~~AL~~A~~~i~sg~~~~ 166 (425)
T 3sqz_A 90 AGSANEILTAED--KEKIDMVILATESSVDQSKAGAVYVHSLLGIQPFARSFEMK-EAAYSATAALNYAKLHVEKHPDTR 166 (425)
T ss_dssp HHHHHTTCCHHH--HHHEEEEEEECSCCSCSSSCHHHHHHHHTTCCSSCEEEEEC-CC-CHHHHHHHHHHHHHHHSTTCE
T ss_pred HHHHHHHHHhCC--hhhCCEEEEEecccccccchHHHHHHHHhCCCCCeeEEEEc-CHhHHHHHHHHHHHHHHHcCCCCe
Confidence 999999999997 99999999997 56778899999999999998669999999 599999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccc--cccccCCCC
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSV--FQQQDKDGN 239 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~g~ 239 (401)
||||++|.+|..+++ . ...+|||||+|+||++++.. +. ....+++...+.+ +.+.+ ...
T Consensus 167 vLVvgae~~s~~~~~-~------~~~lfGDGA~A~ll~~~~~i-----l~------~~~~s~~~~~d~~df~~p~~-~~~ 227 (425)
T 3sqz_A 167 VLVLASDIAKYGIGT-P------GESTQGAGSIAMLVKKDPRI-----LI------LHDETLAQTRDIMDFWRPNY-TTT 227 (425)
T ss_dssp EEEEEEEEECCCTTS-G------GGGGCEEEEEEEEEEESCSS-----EE------ECSCCEEEECCCCSEECCTT-CSS
T ss_pred EEEEEEehhcccCCC-C------CCCcccceeeEEEeecCCce-----EE------EEeecccchhhcccccccCC-Ccc
Confidence 999999999987653 2 25899999999999986531 11 1111122111111 22221 000
Q ss_pred eeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChH--------HHH-
Q 044359 240 VGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRA--------IID- 310 (401)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~--------~~~- 310 (401)
... +... .++.+++.+ ..+++.+.+. .++. ++|||+|++||++.+ +++
T Consensus 228 --~~~--dG~~----~~~~~~~~l-----------~~~~~~~l~~-~gl~---~~Did~~v~Hqp~~k~~~ka~~ril~~ 284 (425)
T 3sqz_A 228 --PYV--NGMY----STKQYLDML-----------KTTWAEYQKR-FDVS---LTDFAAFCFHLPFPKLALKGFNKIMDK 284 (425)
T ss_dssp --CEE--CHHH----HHHHHHHHH-----------HHHHHHHHHH-HTCC---GGGCSEEEECCSSHHHHHHHHHHHCCT
T ss_pred --eee--ccHh----HHHHHHHHH-----------HHHHHHHHHH-hCCC---HHHCCEEEECCCcchhHHHHHHHHHhc
Confidence 000 1011 111111111 0111111110 3555 799999999996644 444
Q ss_pred ----HHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHc-CCCCCCCeEEEEeeccchhhcceeeeeeccC
Q 044359 311 ----AVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAK-GKVKKGDRVWQIAFGSGFKVNSAVWKCVSNL 382 (401)
Q Consensus 311 ----~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~-g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~ 382 (401)
.+.+.|+++.++. +.++++||||++||+|++|++++++ |++++||+|+|++||+|++++.+.+++++..
T Consensus 285 ~~~~~~~~~l~~~~e~~---~~~~~~~GNt~sASi~l~L~~~l~~~g~l~~Gd~ill~s~GsG~~ae~~s~~v~~~~ 358 (425)
T 3sqz_A 285 QVPSDLQEKLKVNFEAS---ILYSKQIGNIYTGSLFLGLLSLLENSQNLVAGDKIALFSYGSGAVAEIFTGTLVKGF 358 (425)
T ss_dssp TSCHHHHHHHHHHHHHH---HTTHHHHBCCGGGHHHHHHHHHHHHCSSCCTTCEEEEEEEETTTEEEEEEEEECTTG
T ss_pred cchHHHHHHhCCCHHHH---hhHHhccCccHHHHHHHHHHHHHHhcCCCCCCCEEEEEcccCCcceEEEEEEEcccH
Confidence 6778899999988 6799999999999999999999998 8999999999999999999999999997654
No 32
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=100.00 E-value=1.6e-45 Score=367.27 Aligned_cols=306 Identities=14% Similarity=0.207 Sum_probs=232.9
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCce--ecCCCccCCCCCCChHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDES--CIPLNLHEMQPDVSLKRSREETE 79 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~--~~~~~~~~~~~~~~l~~~~~~~~ 79 (401)
.+++|.|+|+|+|++. |+|+|+.+..+. +. +...+||..|+ ++.+++ ++.
T Consensus 4 ~~vgI~gig~ylP~~~--v~n~el~~~~g~----~~--------~~~~~Gig~r~~~va~~~E--------------~~~ 55 (460)
T 2v4w_A 4 KDVGILALEVYFPAQY--VDQTDLEKYNNV----EA--------GKYTVGLGQTRMGFCSVQE--------------DIN 55 (460)
T ss_dssp SSCEEEEEEEECCSEE--EEHHHHHHHTTC----CT--------TCCCCCCCCCEEECCCTTC--------------CHH
T ss_pred CceEEEEEEEECCCcE--ecHHHHHHHhCC----CH--------HHeeeeeeeEEEEECCCCC--------------CHH
Confidence 5799999999999996 999999987542 11 12235665555 555432 267
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCC--CCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGF--RSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl--~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
+|+++|+++||+++|++++|||+||++| ++++..|+.++.|+++||+ ..++++||++ ++|+||+.||.+|.++|++
T Consensus 56 ~La~~Aa~~AL~~agi~~~dId~IivaT~t~~~~~ps~A~~v~~~LGl~g~~~~~a~Dv~-~ACsGg~~AL~~A~~~I~s 134 (460)
T 2v4w_A 56 SLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTT-NACYGGTASLFNAANWMES 134 (460)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEE-SGGGHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCCCCCCcEEEEec-chhHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998 5778899999999999999 3478999999 5999999999999999999
Q ss_pred CC--CCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccc
Q 044359 157 HK--NSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQ 234 (401)
Q Consensus 157 g~--~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
|+ .++||||++|+++ .. .++++ .++||||+|+||+++++. ...+.+++.+.+.++...
T Consensus 135 g~~~~~~aLVVgaE~~s-~~-~~~~r------~t~GDGA~A~ll~~~~~l------------~~~~~~~Gs~~~~l~d~~ 194 (460)
T 2v4w_A 135 SSWDGRYAMVVCGDIAV-YP-SGNAR------PTGGAGAVAMLIGPKAPL------------ALERGLRGTHMENVYDFY 194 (460)
T ss_dssp TTCCSCEEEEEEEEEEC-CC-SSTTG------GGCEEEEEEEEEESSCSE------------EECTTCCEEEECCCCSEE
T ss_pred CCccCCEEEEEeccccc-cc-CCCCC------cccccceeEEEeecCCCc------------eEEEcceecceeeeeccC
Confidence 98 4999999999997 33 33554 346999999999986421 122334444333222100
Q ss_pred cCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhh-------c----------cCCCcchhhhcc
Q 044359 235 DKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKK-------S----------KTYVPNFKKAFE 297 (401)
Q Consensus 235 ~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------l----------~~l~~~~~~did 297 (401)
...+ ..+.+ .|++.++|+++++.|+++ + +++. .+|||
T Consensus 195 ~p~~------~~~~~-----------------~mdG~~v~~~av~~l~~~~~~y~~~~~~~l~~~~~~~gl~---~~did 248 (460)
T 2v4w_A 195 KPNL------ASEYP-----------------IVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFT---LDDLQ 248 (460)
T ss_dssp CCCT------TCSCC-----------------EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC---GGGCS
T ss_pred CCCC------CCCCe-----------------EEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCC---HHHhc
Confidence 0000 00111 223333444444444444 2 2444 79999
Q ss_pred eEeecCCChHHHHHHHHHcCCC----------------------------------------------chhhhhhHHHHh
Q 044359 298 HFCIHAGGRAIIDAVEENLKLS----------------------------------------------KEDGEASRMTLY 331 (401)
Q Consensus 298 ~~i~Hq~~~~~~~~~~~~lgi~----------------------------------------------~e~~~~s~~~~~ 331 (401)
+|++||+|.+|++.+.++|+++ .+|+..+..+.+
T Consensus 249 ~~v~Hqan~rii~~~~~rL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ekv~~~l~~~~ 328 (460)
T 2v4w_A 249 YMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLYLST 328 (460)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHHSCHHHHHHHCGGGGGGTTCCGGGGTTCHHHHHHHHHHHHHHHHHHTGGGGHHHH
T ss_pred eEeecCCchHHHHHHHHHcCCCcccccccccccccccchhhhccccccccccchhHHHHHHhhhhhhhHhhcccccchhh
Confidence 9999999999999999999988 578865555669
Q ss_pred hhcCcccchHHHHHHHHHHcCC--CCCCCeEEEEeeccchhhcceeeeeeccC
Q 044359 332 RFGNTSSSSYWYELCYLEAKGK--VKKGDRVWQIAFGSGFKVNSAVWKCVSNL 382 (401)
Q Consensus 332 ~~Gn~~sasi~~~L~~~~~~g~--l~~Gd~vll~~~G~G~s~~~~~l~~~~~~ 382 (401)
++|||++||+|++|.+++++++ +++||+|+|++||+|++.....+++.+.-
T Consensus 329 ~~GNt~aASiplaL~s~l~~~~~~~~~G~rill~syGsG~~s~~fs~~v~~~~ 381 (460)
T 2v4w_A 329 HNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDA 381 (460)
T ss_dssp HHCCCGGGHHHHHHHHHHHHSCHHHHTTCEEEEEEEETTTEEEEEEEEECSCC
T ss_pred ccCccHHHHHHHHHHHHHHhCCcccCCCCEEEEEEecCCcceeEEEEEEeCCc
Confidence 9999999999999999999985 78999999999999999998888887653
No 33
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=100.00 E-value=3.8e-44 Score=344.34 Aligned_cols=304 Identities=19% Similarity=0.299 Sum_probs=240.8
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
+++|.++|+|+|++. ++|+++.+.++ .++ +|+.+++||++||++.+ . ...+|+
T Consensus 2 ~~~I~~~g~~~P~~~--~~~~~~~~~~~----~~~------~~i~~~~Gi~~r~~~~~-~--------------~~~~l~ 54 (309)
T 2ebd_A 2 GTKIIGTGVYLPKNV--LTNFDLEKIVD----TSD------EWITTRTGIKERRIAKE-E--------------TITYMA 54 (309)
T ss_dssp CEEEEEEEEECCSEE--EEHHHHHTTSS----CCH------HHHHHHHCCCEEEECSS-C--------------CHHHHH
T ss_pred ceEEEEEEEECCCce--EcHHHHHHHcC----CCH------HHHHHHhCceeeeecCC-C--------------CHHHHH
Confidence 589999999999996 99999987532 122 57889999999998754 1 157999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
.+|+++||+++|+++++||.|+++++ +++..|+.+.+++.+||++. +++++++ .+|+|++.||..|.++|++|..++
T Consensus 55 ~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 132 (309)
T 2ebd_A 55 TQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKG-VYAFDIS-AACSGFIYALDIADSFIKSGKAKN 132 (309)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTT-CEEEEEE-CGGGHHHHHHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-ceEEecC-ccchHHHHHHHHHHHHHHCCCCCE
Confidence 99999999999999999999999874 56678999999999999984 7999999 599999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCee
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVG 241 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (401)
|||+++|.++..+++ .++. ..++|||||+|+||++.+... . +....+.+++..++.+..+. .+.
T Consensus 133 vlv~g~e~~s~~~~~-~~~~---~~~~~gdGaaA~vL~~~~~~~-----~---i~~~~~~~~g~~~~~~~~p~--~~~-- 196 (309)
T 2ebd_A 133 VLVIGAEKLSEAVDW-EDRS---TCVLFGDGAGAVVVTRSEDKS-----D---ILATRMYAEGSLEELLHADN--CGY-- 196 (309)
T ss_dssp EEEEEEEEGGGTCCT-TCTT---TTTTBCEEEEEEEEEECSSSC-----E---EEEEEEEECGGGGGGEEECT--TCC--
T ss_pred EEEEEecccccccCc-cchh---hccccccccEEEEEEecCCCC-----c---eeEEEEEecCCccceeEeCC--CCe--
Confidence 999999999987765 3443 468999999999999876431 1 22333445655444444331 111
Q ss_pred eEe-ccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcceEeecCCChHHHHHHHHHcCC
Q 044359 242 VSI-SRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKL 318 (401)
Q Consensus 242 ~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~~i~Hq~~~~~~~~~~~~lgi 318 (401)
+.. .++++....+.+. +.+.+.+ +++. ++|||+|++||.+.++++.+.+.||+
T Consensus 197 ~~~~g~~~~~~~~~~~~---------------------~~i~~al~~agl~---~~did~~~~H~~~~~~~~~~~~~lg~ 252 (309)
T 2ebd_A 197 IRMKGRELFKVAVRSME---------------------EVCREVLEKAGVK---PEEVSLVIPHQANVRIINALAEKLNI 252 (309)
T ss_dssp EEECHHHHHHHHHHHHH---------------------HHHHHHHHHHTCC---GGGCSEEEECCSCHHHHHHHHHHTTC
T ss_pred EEEccHHHHHHHHHHHH---------------------HHHHHHHHHcCCC---HHHCCEEEEcCCCHHHHHHHHHHhCC
Confidence 111 1111111111111 1122222 3565 79999999999999999999999999
Q ss_pred CchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeee
Q 044359 319 SKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 319 ~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
+++++ +.++.+|||+++||+|++|.+++++|++++||++++++||+|++|++++|||
T Consensus 253 ~~~~~---~~~~~~~Gh~~~As~~~~L~~~~~~g~~~~G~~~l~~~~G~G~~~~~~~l~~ 309 (309)
T 2ebd_A 253 PKEKV---FVNIQKYGNTSAASIPIALHEAIKEGKVKRGDLILMTAMGGGLTWGAVLLRY 309 (309)
T ss_dssp CGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CHHHh---hhhHhhhcchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEC
Confidence 99998 4678999999999999999999999999999999999999999999999997
No 34
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=100.00 E-value=1.6e-44 Score=349.01 Aligned_cols=313 Identities=19% Similarity=0.279 Sum_probs=240.1
Q ss_pred eEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHHH
Q 044359 4 VYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVLC 83 (401)
Q Consensus 4 v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la~ 83 (401)
++|.++|+|+|++. ++|+++.+.++ .++ +|+.+++||++||++.++. ...+|+.
T Consensus 2 ~~I~~~g~~~P~~~--~~~~~~~~~~~----~~~------~~i~~~~Gi~~r~~~~~~~--------------~~~~la~ 55 (322)
T 1ub7_A 2 SGILALGAYVPERV--MTNADFEAYLD----TSD------EWIVTRTGIKERRVAAEDE--------------YTSDLAF 55 (322)
T ss_dssp CEEEEEEEECCSEE--EEHHHHHTTSS----CCH------HHHHHHTCCCEEEECCTTC--------------CHHHHHH
T ss_pred cEEEEEEEECCCce--ecHHHHHHHhC----CCH------HHHHHhcCceEEeecCCCC--------------CHHHHHH
Confidence 68999999999997 99999987532 122 5788999999999986532 2579999
Q ss_pred HHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeE
Q 044359 84 TIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLA 162 (401)
Q Consensus 84 ~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~v 162 (401)
+|+++||+++|+++++||.|+++++ +++..|+.+.+++.+||+ ++++++++ .+|+|++.||..|.++|++|..++|
T Consensus 56 ~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl--~~~~~~v~-~aCas~~~al~~A~~~i~~g~~~~v 132 (322)
T 1ub7_A 56 KAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYDLL-AGCPGWIYALAQAHALVEAGLAQKV 132 (322)
T ss_dssp HHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEEEE-CSTTHHHHHHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC--CCEEEeeC-ccchHHHHHHHHHHHHHHcCCCCEE
Confidence 9999999999999999999998874 566678899999999999 48999999 5999999999999999999999999
Q ss_pred EEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCeee
Q 044359 163 LVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGV 242 (401)
Q Consensus 163 Lvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 242 (401)
||+++|.+|..+++ .|+. ..++|||||+|+||++.+... +++ ...+.+++...+.+..+.++...+..
T Consensus 133 lv~g~e~~s~~~~~-~d~~---~~~~~GdGA~A~vL~~~~~~~-----~i~---~~~~~~~g~~~~~~~~~~~~~~~p~~ 200 (322)
T 1ub7_A 133 LAVGAEALSKIIDW-NDRA---TAVLFGDGGGAAVVGKVREGY-----GFR---SFVLGADGTGAKELYHACVAPRLPDG 200 (322)
T ss_dssp EEEEEECGGGTSCT-TCHH---HHTTBCCEEEEEEEECCCTTC-----EEE---EEEEEECGGGCTTEEEESSCSBCTTS
T ss_pred EEEEechhccccCh-hhcc---cceeeccccEEEEEEecCCCC-----cee---EEEEEEecCCCCeEEeCCCCCCCCcc
Confidence 99999999987765 4444 578999999999999875421 222 23333455444433332110000000
Q ss_pred EeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHH----HHhhhc--cCCCcchhhhcceEeecCCChHHHHHHHHHc
Q 044359 243 SISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWS----VVCKKS--KTYVPNFKKAFEHFCIHAGGRAIIDAVEENL 316 (401)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l--~~l~~~~~~did~~i~Hq~~~~~~~~~~~~l 316 (401)
.-..... .+++.+.+++..+ .+.+.+ +++. ++|||+|++||.|.++++.+.+.|
T Consensus 201 ~~~~~~~-----------------~~~g~~~~~~~~~~~~~~i~~al~~agl~---~~did~~~~H~~~~~~~d~~~~~l 260 (322)
T 1ub7_A 201 TSMKNRL-----------------YMNGREVFKFAVRVMNTATLEAIEKAGLT---PEDIRLFVPHQANLRIIDAARERL 260 (322)
T ss_dssp CBCCSSC-----------------EECHHHHHHHHHHHHHHHHHHHHHHHTCC---GGGCSEEEECCSCHHHHHHHHHTT
T ss_pred ccccceE-----------------EecCHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCCEEEEcCCCHHHHHHHHHHc
Confidence 0000000 0011111111111 122222 3565 799999999999999999999999
Q ss_pred CCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeec
Q 044359 317 KLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVS 380 (401)
Q Consensus 317 gi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~ 380 (401)
|++++++ ..++.+|||+++||++++|.+++++|++++||++++.+||+|+++++++|||.+
T Consensus 261 g~~~~~~---~~~~~~~Gh~~~As~~~~l~~~l~~g~~~~g~~~l~~~~G~G~~~~~~vl~~~~ 321 (322)
T 1ub7_A 261 GLPWERV---AVNVDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVSFGAGLTWAAAVLTWGG 321 (322)
T ss_dssp TCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEECCC
T ss_pred CCCHHHH---HHHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEChhheeEEEEEEeCC
Confidence 9999998 468899999999999999999999999999999999999999999999999943
No 35
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=100.00 E-value=2.5e-44 Score=349.55 Aligned_cols=309 Identities=20% Similarity=0.251 Sum_probs=238.0
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
.+++|.++|+|+|++. ++|+++.+.++ .++ +|+.+++||++|+++.++. ...+|
T Consensus 11 ~~~~I~g~g~~~P~~~--~~~~~~~~~~~----~~~------~~i~~~~gi~~r~~~~~~~--------------~~~~l 64 (335)
T 1u6e_A 11 RSVGLLSVGAYRPERV--VTNDEICQHID----SSD------EWIYTRTGIKTRRFAADDE--------------SAASM 64 (335)
T ss_dssp SCEEEEEEEEECCSEE--EEHHHHTTSSS----CCH------HHHHHHHCCSEEEECCTTC--------------CHHHH
T ss_pred CceEEEEEEEECCCce--ecHHHHHHHhC----CCH------HHHHHhcCCceEeecCCCC--------------CHHHH
Confidence 4789999999999996 99999987532 122 5788999999999876532 25799
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNS 160 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~ 160 (401)
+.+|+++||+++|+++++||.||++++ +++..|+.+.+++.+||++ ++++++++ .+|+|++.||..|.++|++|..+
T Consensus 65 a~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~-~aC~s~~~al~~A~~~i~~g~~~ 142 (335)
T 1u6e_A 65 ATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAK-GILGFDLS-AGAAGFGYALGAAADMIRGGGAA 142 (335)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCT-TSEEEEEE-CGGGHHHHHHHHHHHHHHHTSCS
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEeeec-cccHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999874 6677899999999999997 68999999 59999999999999999999999
Q ss_pred eEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCcccccccccccc-----
Q 044359 161 LALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQD----- 235 (401)
Q Consensus 161 ~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----- 235 (401)
+|||+++|.+|..+++ .++. ...+|||||+|+||++.+... .+ ...+.+++...+.+..+..
T Consensus 143 ~vLv~g~e~~s~~~~~-~d~~---~~~~~gDGA~A~vl~~~~~~~---i~------~~~~~~~g~~~~~~~~~~~~~~~~ 209 (335)
T 1u6e_A 143 TMLVVGTEKLSPTIDM-YDRG---NCFIFADGAAAVVVGETPFQG---IG------PTVAGSDGEQADAIRQDIDWITFA 209 (335)
T ss_dssp SEEEEEEEECGGGCCT-TCTT---TTTTBCEEEEEEEEEECSSCC---BC------CCEEEECGGGGGGEEESSCHHHHH
T ss_pred EEEEEEEcccccccCc-cccc---cceEeccccEEEEEEecCCCC---ee------EEEEEEcCCcccceeecCCccCcC
Confidence 9999999999987765 4444 578999999999999865310 01 1111223332322221100
Q ss_pred --CCCC-eeeEec-cCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcceEeecCCChHHH
Q 044359 236 --KDGN-VGVSIS-RSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEHFCIHAGGRAII 309 (401)
Q Consensus 236 --~~g~-~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~~i~Hq~~~~~~ 309 (401)
..+. ..+... ++++....+.+ ...+.+.+ +++. ++|||+|++||.+.+++
T Consensus 210 ~~~~~~~~~~~~~g~~~~~~~~~~~---------------------~~~i~~al~~agl~---~~dId~~~~H~~~~~~~ 265 (335)
T 1u6e_A 210 QNPSGPRPFVRLEGPAVFRWAAFKM---------------------GDVGRRAMDAAGVR---PDQIDVFVPHQANSRIN 265 (335)
T ss_dssp TSTTSCCCCEEECHHHHHHHHHHHH---------------------HHHHHHHHHHHTCC---GGGCCEEEECCSCHHHH
T ss_pred CCccCccceEEEcCHHHHHHHHHHH---------------------HHHHHHHHHHcCCC---HHHCCEEEECCCCHHHH
Confidence 0000 001110 11111111111 11122222 3665 79999999999999999
Q ss_pred HHHHHHcCCCch-hhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeee
Q 044359 310 DAVEENLKLSKE-DGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 310 ~~~~~~lgi~~e-~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
+.+.+.||++++ ++ +.++++|||+++||+|++|+++++++++++||++++++||+|++|++++|||
T Consensus 266 ~~~~~~lg~~~~~~~---~~~~~~~Gnt~sAs~~~~L~~~~~~~~~~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 266 ELLVKNLQLRPDAVV---ANDIEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp HHHHHHHTCCTTCEE---CCTHHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHcCCCchhhh---hhhhhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEEEEEe
Confidence 999999999998 77 4578999999999999999999999999999999999999999999999999
No 36
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=1.7e-43 Score=388.57 Aligned_cols=349 Identities=18% Similarity=0.209 Sum_probs=252.4
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCC--hhhHHHHHHHHHHcCCCCceecCCCcc---------CCCCCCC
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFD--KESLDFQEKVLEKSGIGDESCIPLNLH---------EMQPDVS 70 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~--~~~~~~~~~i~~~~GI~~R~~~~~~~~---------~~~~~~~ 70 (401)
.+++|+|+|+|+|+.. |+|+|+.+.+...+..+ ..-.+.++++.+++||++|+++.++.. ...+...
T Consensus 602 ~~~~I~g~g~~~P~~~--v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~~~~ 679 (979)
T 3tsy_A 602 GPATILAIGTATPDHC--VYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLN 679 (979)
T ss_dssp SCEEEEEEEEECCSCE--EEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHCHHHHSSSSCCHH
T ss_pred CCceeecccCCCCCCc--cCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhhcCcccccccCCCHH
Confidence 4689999999999997 99999999853221111 111234567999999999998866321 0111111
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCC-cceEEeecccchhHHHHH
Q 044359 71 --LKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSN-IKSINLSGMGCSAGILSI 147 (401)
Q Consensus 71 --l~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~-~~~~~i~~~gC~~~~~aL 147 (401)
...+.+++.+|+.+|+++||+++|++++|||.||++|++++..|+.+++|+++||++.. +++++++ ++|+|++.||
T Consensus 680 ~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~-~aCsg~~~Al 758 (979)
T 3tsy_A 680 IRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYH-QGCYAGGTVL 758 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEES-CCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEEeeec-cccHhHHHHH
Confidence 22345568899999999999999999999999999998888899999999999999733 4689999 5999999999
Q ss_pred HHHHHHHHcCCCCeEEEEeeccccCCCCCCC--CcchhhhhhcccccceEEEEecCCCCc-cccceEEeeeeeecccCCc
Q 044359 148 SLVKDLLKVHKNSLALVLSMEAISSNGYTGS--TKSMLISNTVFRMGGAAILLSNRQQDK-HIAKYKLKHLVRTHMGYDD 224 (401)
Q Consensus 148 ~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~--d~~~~i~~~lfGDGAaA~ll~~~~~~~-~~~~~~l~~~~~~~~~~~~ 224 (401)
.+|.++|++|..++||||++|.++..+.... ..+.++..++|||||+|+||++.+... ....+...+.....+ .+.
T Consensus 759 ~~A~~~i~sG~~~~vLvvg~e~~~~~~~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~-~~~ 837 (979)
T 3tsy_A 759 RTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFI-PNS 837 (979)
T ss_dssp HHHHHHHHTSTTCEEEEEEEECTTTTCCCCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEEC-TTC
T ss_pred HHHHHHHHhCCCCEEEEEEEEecchheeCCCccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEe-cCc
Confidence 9999999999999999999999876653211 123455678999999999999866431 112222221111111 111
Q ss_pred cccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcceEeec
Q 044359 225 QAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEHFCIH 302 (401)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~~i~H 302 (401)
. .......... ...+...++++....+.+... +.+++ +|+. ++|||+|++|
T Consensus 838 ~--~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~---------------------~~~al~~agl~---~~did~~~~H 890 (979)
T 3tsy_A 838 A--GAIAGNLREV-GLTFHLWPNVPTLISENVEKC---------------------LTQAFDPLGIS---DWNSLFWIAH 890 (979)
T ss_dssp T--TSEEEEEETT-EEEEEECTTHHHHHHHHHHHH---------------------HHHHHGGGTCC---CGGGSEEEEC
T ss_pred h--hheEEEEecC-ceEEEEchHHHHHHHHHHHHH---------------------HHHHHhhcCCC---CcccceEEEC
Confidence 0 0000001111 112334444444433322222 12222 3565 7999999999
Q ss_pred CCChHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeE---------EEEeeccchhhcc
Q 044359 303 AGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRV---------WQIAFGSGFKVNS 373 (401)
Q Consensus 303 q~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~v---------ll~~~G~G~s~~~ 373 (401)
|+|.++++.++++||++++|+..++.++++||||+|||+|++|++++++ +++||++ +|++||+|++|++
T Consensus 891 q~~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~--~~~G~~v~~g~~~~~~ll~~~G~G~t~~~ 968 (979)
T 3tsy_A 891 PGGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKK--SLKGERATTGEGLDWGVLFGFGPGLTIET 968 (979)
T ss_dssp CSCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHH--HHHTTCSBTTTTCSEEEEEEECGGGEEEE
T ss_pred CCChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhh--hcccccccCCCCcceeEEEEeCCchHHHH
Confidence 9999999999999999999997666779999999999999999998773 4455554 9999999999999
Q ss_pred eeeeeeccCC
Q 044359 374 AVWKCVSNLD 383 (401)
Q Consensus 374 ~~l~~~~~~~ 383 (401)
++|||...++
T Consensus 969 ~~l~~~~~~~ 978 (979)
T 3tsy_A 969 VVLHSIPMVT 978 (979)
T ss_dssp EEEECCBCCC
T ss_pred HHHHhccccC
Confidence 9999988655
No 37
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=100.00 E-value=9.5e-44 Score=352.76 Aligned_cols=305 Identities=15% Similarity=0.183 Sum_probs=232.3
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
+++|.++|+|+|++. |+|+|+.+..+ .++ +|+.+++||++|+++.++. ++.+|+
T Consensus 2 ~v~I~~ig~y~P~~~--v~~~~l~~~~~----~~~------~~i~~~~Gi~~r~~~~~~e--------------~~~~la 55 (396)
T 1xpm_A 2 AIGIDKINFYVPKYY--VDMAKLAEARQ----VDP------NKFLIGIGQTEMAVSPVNQ--------------DIVSMG 55 (396)
T ss_dssp CEEEEEEEEECCSEE--EEHHHHHHHTT----SCH------HHHHTTTCCSEEEECCTTC--------------CHHHHH
T ss_pred ceEEEEEEEeCCCeE--ecHHHHHHHhC----CCH------HHHhhhcCceEEEeCCCCC--------------CHHHHH
Confidence 689999999999986 99999998754 222 5788999999999986533 257999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL 161 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~ 161 (401)
.+|+++||++ +++++||.||++| ++++..|+.+..|+.+||+++++++++++ ++|+|++.||..|.++|++|+.++
T Consensus 56 ~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~-~aC~sg~~Al~~A~~~I~sg~~~~ 132 (396)
T 1xpm_A 56 ANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMK-EACYAATPAIQLAKDYLATRPNEK 132 (396)
T ss_dssp HHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEE-STTTTHHHHHHHHHHHHTTCTTCE
T ss_pred HHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999998 7899999999987 45667899999999999998679999999 599999999999999999999999
Q ss_pred EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCcccccc---ccccccCCC
Q 044359 162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSS---VFQQQDKDG 238 (401)
Q Consensus 162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~g 238 (401)
||||++|..+..++. . ...+|||||+|+||++.+.. +. .... ++...+. ++.+.. .+
T Consensus 133 vLvvg~e~s~~~~~~----~---~~~~~GdGA~A~vl~~~~~i-----~~------~~~~-~g~~~~d~~~~~~p~~-~~ 192 (396)
T 1xpm_A 133 VLVIATDTARYGLNS----G---GEPTQGAGAVAMVIAHNPSI-----LA------LNED-AVAYTEDVYDFWRPTG-HK 192 (396)
T ss_dssp EEEEEEEEECCCTTC----S---SGGGCEEEEEEEEEEESCSS-----EE------ECSC-CEEEECCCCSEECBTT-CS
T ss_pred EEEEeehhhccccCC----C---CCcccccceEEEEeccCCce-----EE------EEec-cccccceEEEeeccCC-CC
Confidence 999999984333332 2 36899999999999975421 11 1111 2221111 122211 11
Q ss_pred CeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc--cCCCcchhhhcceEeecCCChHHHHHHHHHc
Q 044359 239 NVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS--KTYVPNFKKAFEHFCIHAGGRAIIDAVEENL 316 (401)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~did~~i~Hq~~~~~~~~~~~~l 316 (401)
. ... +.... ++.+++. ....+.+.+ +++. ++|||+|++||+|.++++.+.+.|
T Consensus 193 ~--~~~--~G~~~----~~~~~~~--------------~~~~~~~~L~~agl~---~~did~~~~H~~~~~~~~~~~~~l 247 (396)
T 1xpm_A 193 Y--PLV--DGALS----KDAYIRS--------------FQQSWNEYAKRQGKS---LADFASLCFHVPFTKMGKKALESI 247 (396)
T ss_dssp S--CEE--CHHHH----HHHHHHH--------------HHHHHHHHHHHHTCC---GGGCSEEEECCSSHHHHHHHHHTT
T ss_pred C--eEE--EcHHH----HHHHHHH--------------HHHHHHHHHHHcCCC---HHHCCEEEecCCchHHHHHHHHHH
Confidence 0 111 11111 1111110 001111222 3565 799999999999999999999988
Q ss_pred -----CCCchhhhhhHHHH-------hhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccCCc
Q 044359 317 -----KLSKEDGEASRMTL-------YRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDP 384 (401)
Q Consensus 317 -----gi~~e~~~~s~~~~-------~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~ 384 (401)
+++++|+ ..++ ++||||++||+|++|+++++++++++||+|+|++||+|++++++++++.+....
T Consensus 248 ~~~~~~~~~e~~---~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~~~l~~Gd~ill~s~GsG~~~~~~~~~v~~~~~~ 324 (396)
T 1xpm_A 248 IDNADETTQERL---RSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDLQAGETIGLFSYGSGSVGEFYSATLVEGYKD 324 (396)
T ss_dssp GGGSCHHHHHHH---HHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHHSCCCTTCEEEEEEEETTTEEEEEEEEECTTGGG
T ss_pred HhhcccCCHHHH---HHHhhhhhhhhhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEECcchhheEEEEEEcccHHH
Confidence 8998887 3555 999999999999999999999999999999999999999999999999976543
No 38
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=357.55 Aligned_cols=309 Identities=17% Similarity=0.222 Sum_probs=232.1
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359 3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL 82 (401)
Q Consensus 3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la 82 (401)
+++|.++|+|+|++. |+|+|+.+..+. ++ +++...+||++|+++.+++ ++.+|+
T Consensus 24 ~vgI~aig~y~P~~~--v~~~el~~~~g~----~~------~~~~~~~Gi~~r~~~~~~e--------------~~~~La 77 (478)
T 2p8u_A 24 DVGIVALEIYFPSQY--VDQAELEKYDGV----DA------GKYTIGLGQAKMGFCTDRE--------------DINSLC 77 (478)
T ss_dssp CCEEEEEEEECCSEE--EEHHHHHHHHTC----CT------TCCCCCCCCCEEECCCTTC--------------CHHHHH
T ss_pred ceEEEEEEEECCCeE--ecHHHHHHHhCC----Ch------hHhecccCceEEEeCCCCC--------------CHHHHH
Confidence 689999999999986 999999988652 22 3567889999999876532 267999
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHH---cCCCCCcceEEeecccchhHHHHHHHHHHHHHcCC
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINK---FGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHK 158 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~---LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~ 158 (401)
++|+++||+++|+++++||+||++| ++++..|+.+..|++. ||++ +++++|++ ++|+|++.||++|.++|++|+
T Consensus 78 ~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~-~~~~~dv~-~aC~gg~~AL~~A~~~i~sg~ 155 (478)
T 2p8u_A 78 MTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNT-DIEGIDTT-NACYGGTAAVFNAVNWIESSS 155 (478)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCC-CCBCCEEE-SGGGHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCC-CceEEEEc-chhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999997 4667799999999954 5555 79999999 599999999999999999998
Q ss_pred --CCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccc---ccccccc
Q 044359 159 --NSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQA---YSSVFQQ 233 (401)
Q Consensus 159 --~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~ 233 (401)
.++||||++|.. . + .+.. +..+|||||+|+||++++.. ++ ...+ ++.+ ...++.+
T Consensus 156 ~~~~~aLVV~~Eia-~---~-~~~~---~~~~fGdGA~A~Ll~~~~~~-------~l---~~~~--~gs~~~~~~d~~~p 215 (478)
T 2p8u_A 156 WDGRYALVVAGDIA-V---Y-ATGN---ARPTGGVGAVALLIGPNAPL-------IF---ERGL--RGTHMQHAYDFYKP 215 (478)
T ss_dssp CCSCEEEEEEEEEE-C---C-CSST---TGGGCEEEEEEEEEESSCSE-------EE---CTTC--CEEEECCCCSEECC
T ss_pred ccCCEEEEEEeeee-c---c-cCCC---CCCcccceeEEEEEecCCCc-------eE---eecc--ceecccchhheeee
Confidence 899999999964 1 2 2333 46899999999999976531 11 1110 1111 2233333
Q ss_pred ccCCCCeeeEeccCchHHHHH-HHHHHHHhhCCCCCchhHHHHHHHHHHhhhc----------cCCCcchhhhcceEeec
Q 044359 234 QDKDGNVGVSISRSLLPVAAR-ALRINISQLGPHVLPYSEQLKYLWSVVCKKS----------KTYVPNFKKAFEHFCIH 302 (401)
Q Consensus 234 ~~~~g~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----------~~l~~~~~~did~~i~H 302 (401)
..+.. .|.+.++ .++.++.. ...+...+.+.+ +++. .+|||+|++|
T Consensus 216 ~~~~~---------~~~~dG~~s~~~y~~a-----------~~~~~~~~~~~l~~~~~~~~~~~g~~---~~did~~v~H 272 (478)
T 2p8u_A 216 DMLSE---------YPIVDGKLSIQCYLSA-----------LDRCYSVYCKKIHAQWQKEGNDKDFT---LNDFGFMIFH 272 (478)
T ss_dssp CTTCS---------SCEECHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHTCCCCCC---GGGCSEEEEC
T ss_pred cCCCc---------ceEEcCcchHHHHHHH-----------HHHHHHHHHHHHhhhccccccccCCC---hHHcCEEEec
Confidence 21110 0111111 11111110 001111111211 2444 7999999999
Q ss_pred CCChHHHHHHHHHcC------------------------CCc---------h-------------hhhhhHHHHhhhcCc
Q 044359 303 AGGRAIIDAVEENLK------------------------LSK---------E-------------DGEASRMTLYRFGNT 336 (401)
Q Consensus 303 q~~~~~~~~~~~~lg------------------------i~~---------e-------------~~~~s~~~~~~~Gn~ 336 (401)
|+|.++++.+.+.|+ ++. | |+.+++.++++||||
T Consensus 273 ~~~~ki~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ek~~~~~~~~~~~~k~~~~~~~~~~~GN~ 352 (478)
T 2p8u_A 273 SPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKASLLVSNQNGNM 352 (478)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHCTTGGGSGGGTTCGGGTTCCGGGCTTCHHHHHHHHHHTHHHHHHHTTGGGHHHHHHCCC
T ss_pred CCcHHHHHHHHHHhCcccccccccccccccccccchhccCChhhcccchhHHHHHHHHhHHHHHHhHHHHHHHHHhcCch
Confidence 999999999999998 776 6 655567899999999
Q ss_pred ccchHHHHHHHHHHcCC--CCCCCeEEEEeeccchhhcceeeeeeccC
Q 044359 337 SSSSYWYELCYLEAKGK--VKKGDRVWQIAFGSGFKVNSAVWKCVSNL 382 (401)
Q Consensus 337 ~sasi~~~L~~~~~~g~--l~~Gd~vll~~~G~G~s~~~~~l~~~~~~ 382 (401)
++||+|++|++++++++ +++||+|+|++||+|++|++++++|.+..
T Consensus 353 ~saSi~l~L~~ll~~~~~~~~~Gdrill~s~GsG~~~~~~~l~~~~~~ 400 (478)
T 2p8u_A 353 YTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDA 400 (478)
T ss_dssp GGGHHHHHHHHHHHHSCHHHHTTCEEEEEEEETTTEEEEEEEEECSCC
T ss_pred HHHHHHHHHHHHHHhCCccCCCCCEEEEEEEcchhhhEEEEEEEeCCC
Confidence 99999999999999987 88999999999999999999999998763
No 39
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=100.00 E-value=8.5e-43 Score=350.96 Aligned_cols=317 Identities=16% Similarity=0.194 Sum_probs=231.0
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
.+++|.++|+|+|++. |+|+|+.+..+. ++ +|+...+|+++|+++.+++ ++.+|
T Consensus 2 ~~v~I~~ig~y~P~~~--v~~~~l~~~~g~----~~------~~~~~g~G~~~~~~~~~~e--------------~~~~L 55 (450)
T 2f82_A 2 KNVGILAMDIYFPPTC--VQQEALEAHDGA----SK------GKYTIGLGQDCLAFCTELE--------------DVISM 55 (450)
T ss_dssp CSCEEEEEEEECCSEE--EEHHHHHHHTTC----CT------TTTTTTSCCCEEECCCTTC--------------CHHHH
T ss_pred CceEEEEEEEECCCee--ccHHHHHHHhCC----CH------HHhhhhhCceeeeeCCCCC--------------CHHHH
Confidence 4689999999999997 999999987542 22 3556677888887765432 26799
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCC--CCCcceEEeecccchhHHHHHHHHHHHHHcCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGF--RSNIKSINLSGMGCSAGILSISLVKDLLKVHK 158 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl--~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~ 158 (401)
+.+|+++||+++|+++++||+||++| ++++..|+.+..|++.||+ .+++++++++ ++|+|++.||.+|.++|++|.
T Consensus 56 a~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~-~aC~gg~~AL~~A~~~I~sg~ 134 (450)
T 2f82_A 56 SFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDST-NACYGGTAALLNCVNWVESNS 134 (450)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEEC-SGGGHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCceEEEhh-hhhHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999987 5677789999999999999 4479999999 599999999999999999998
Q ss_pred C--CeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccC
Q 044359 159 N--SLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDK 236 (401)
Q Consensus 159 ~--~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
. ++||||++|.++. .++. ...+|||||+|+||++++.. .+.. +...++. .+ ...++.+..+
T Consensus 135 ~~~~~vLVvg~e~~~~-----~~~~---~~~~fGDGA~A~ll~~~~~~----~~~~-~~~g~~~-~~---~~d~~~p~~~ 197 (450)
T 2f82_A 135 WDGRYGLVICTDSAVY-----AEGP---ARPTGGAAAIAMLIGPDAPI----VFES-KLRGSHM-AH---VYDFYKPNLA 197 (450)
T ss_dssp CCSCEEEEEEEEEECC-----SSST---TGGGCEEEEEEEEEESSCSE----EEEE-EEEEEEE-CC---CCSEECCCTT
T ss_pred CcCCeEEEEEeeeccc-----cCCC---CCcccccceEEEEeccCCce----EEEe-ccceeeh-hh---ccceeeeCCC
Confidence 6 9999999999851 2333 46899999999999876531 1221 1111111 01 0112222111
Q ss_pred CCCeeeEeccCchHHHHH-HHHHHHHhhCCCCCchhHHHHHHHHHHhhh-ccCCCcchhhhcceEeecCCChHHHHHHHH
Q 044359 237 DGNVGVSISRSLLPVAAR-ALRINISQLGPHVLPYSEQLKYLWSVVCKK-SKTYVPNFKKAFEHFCIHAGGRAIIDAVEE 314 (401)
Q Consensus 237 ~g~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~l~~~~~~did~~i~Hq~~~~~~~~~~~ 314 (401)
. . .|.+.++ .++.+++.+ .+.++...+.+.+. -+++. ++|||+|++||+|.++++.+.+
T Consensus 198 ~---~------~~~~~G~~~~~~~~~~l-------~~~~~~~l~~~~~~~~agl~---~~did~~v~Hq~~~~i~~~~~~ 258 (450)
T 2f82_A 198 S---E------YPVVDGKLSQTCYLMAL-------DSCYKHLCNKFEKLEGKEFS---INDADYFVFHSPYNKLVQKSFA 258 (450)
T ss_dssp C---S------CCEECHHHHHHHHHHHH-------HHHHHHHHHHHHHHHSSCCC---GGGCSEEEECCSSHHHHHHHHH
T ss_pred C---C------ceeecCccHHHHHHHHH-------HHHHHHHHHHhhhccccCCC---hhhcCEEEecCChHHHHHHHHH
Confidence 0 0 0111111 111111111 01111111111110 13454 7999999999999999999999
Q ss_pred HcC------------------CCc----------------------------hhhhhhHHHHhhhcCcccchHHHHHHHH
Q 044359 315 NLK------------------LSK----------------------------EDGEASRMTLYRFGNTSSSSYWYELCYL 348 (401)
Q Consensus 315 ~lg------------------i~~----------------------------e~~~~s~~~~~~~Gn~~sasi~~~L~~~ 348 (401)
.|+ +++ +|+.+|+.++++||||++||+|++|+++
T Consensus 259 ~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~l~L~~~ 338 (450)
T 2f82_A 259 RLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASL 338 (450)
T ss_dssp HHHHHHHHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHHHHHHHHHHHHHHTGGGCHHHHHHCCCGGGHHHHHHHHH
T ss_pred HhcccccccccccccccccccccccccccccccccchhHHHHHhhhhHHHHHHhhhHHHHHHHhcCchHHHHHHHHHHHH
Confidence 998 555 3444455678999999999999999999
Q ss_pred HHcCC-CCCCCeEEEEeeccchhhcceeeeeecc
Q 044359 349 EAKGK-VKKGDRVWQIAFGSGFKVNSAVWKCVSN 381 (401)
Q Consensus 349 ~~~g~-l~~Gd~vll~~~G~G~s~~~~~l~~~~~ 381 (401)
+++++ +++||+|+|++||+|++|++++++|.+.
T Consensus 339 l~~~~~~~~Gd~ill~s~GsG~~~~~~~l~~~~~ 372 (450)
T 2f82_A 339 VHNKHSDLAGKRVVMFSYGSGSTATMFSLRLCEN 372 (450)
T ss_dssp HHHHGGGCTTCEEEEEEEETTTEEEEEEEEECCC
T ss_pred HHhCccCCCCCEEEEEeecCCcccEEEEEEEeCC
Confidence 99885 8899999999999999999999999875
No 40
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-43 Score=355.51 Aligned_cols=321 Identities=13% Similarity=0.165 Sum_probs=230.9
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEV 81 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~l 81 (401)
.+|.|.++|.|+|++. |+|+|+.+..+. ++ +|+..++||++|+++.+++ ++.+|
T Consensus 4 ~~VgI~~~g~y~P~~~--v~~~~l~~~~~~----~~------~~i~~~~Gi~~r~~~~~~E--------------~~~~m 57 (460)
T 2wya_A 4 KDVGILALEVYFPAQY--VDQTDLEKYNNV----EA------GKYTVGLGQTRMGFCSVQE--------------DINSL 57 (460)
T ss_dssp SSCEEEEEEEECCSEE--EEHHHHHHHTTC----CT------TCCCCCCCCCEEECCCTTC--------------CHHHH
T ss_pred CceEEEEEEEECCCeE--EcHHHHHHHhCC----CH------HHHHHhhCcEEEEECCCCC--------------CHHHH
Confidence 4799999999999997 999999987542 23 4677889999999988754 36799
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCC--CCCcceEEeecccchhHHHHHHHHHHHHHcCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGF--RSNIKSINLSGMGCSAGILSISLVKDLLKVHK 158 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl--~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~ 158 (401)
|++|+++||+++|++|++||+||++| ++++..|+.++.|++.||+ ..++.+||++ .+|+||+.||.+|.++|++|+
T Consensus 58 a~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~-~aC~g~~~al~~A~~~i~~g~ 136 (460)
T 2wya_A 58 CLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTT-NACYGGTASLFNAANWMESSS 136 (460)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEE-SGGGHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechh-hhhhhHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999998 6788899999999999975 3468899999 499999999999999999998
Q ss_pred CCeE--EEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccC
Q 044359 159 NSLA--LVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDK 236 (401)
Q Consensus 159 ~~~v--Lvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
.+++ ++++++. +.. .++. ...+|||||+|+++++++... + ..+....+ +.....++.+...
T Consensus 137 ~~~~lvvv~~s~~-~~~----~d~~---~~~~~GdGA~A~l~~~~~~~~----~-~~~~~~~~----~~~~~df~~p~~~ 199 (460)
T 2wya_A 137 WDGRYAMVVCGDI-AVY----PSGN---ARPTGGAGAVAMLIGPKAPLA----L-ERGLRGTH----MENVYDFYKPNLA 199 (460)
T ss_dssp CCSCEEEEEEEEE-ECC----CSST---TGGGCEEEEEEEEEESSCSEE----E-CTTCCEEE----ECCCCSEECCCTT
T ss_pred ccceEEEEEeccc-ccc----cccc---ccccCcchHHhhhcccCCcce----e-eccccccc----ccchhhhhccCCC
Confidence 6544 4334333 222 3333 457899999999999876531 0 00000111 1111122222211
Q ss_pred CCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc------cCCCcchhhhcceEeecCCChHHHH
Q 044359 237 DGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS------KTYVPNFKKAFEHFCIHAGGRAIID 310 (401)
Q Consensus 237 ~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~l~~~~~~did~~i~Hq~~~~~~~ 310 (401)
. +.|.+.+......+. +.+.+.|+++++.+++.+ .++. .+|+|++++||++.++++
T Consensus 200 s---------~~~~~dg~~s~~~~~------~~g~~v~~~~~~~~~~~~~~~l~~~~~~---~~d~d~~v~Hqp~~r~~~ 261 (460)
T 2wya_A 200 S---------EYPIVDGKLSIQCYL------RALDRCYTSYRKKIQNQWKQAGSDRPFT---LDDLQYMIFHTPFCKMVQ 261 (460)
T ss_dssp C---------SCCEECHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHTTCCCCCC---GGGCSEEEECCSSHHHHH
T ss_pred C---------CCcccCCccchHHHH------HhhHHHHHHHHHHHHHHHHHHHHHcCCC---HHHHhhhhhcccchHHHH
Confidence 0 011111111011111 122455666666666554 2343 799999999999999988
Q ss_pred HHHHHcCCCc----------------------------------------------hhhhhhHHHHhhhcCcccchHHHH
Q 044359 311 AVEENLKLSK----------------------------------------------EDGEASRMTLYRFGNTSSSSYWYE 344 (401)
Q Consensus 311 ~~~~~lgi~~----------------------------------------------e~~~~s~~~~~~~Gn~~sasi~~~ 344 (401)
...++|+++. +++..++.++++||||++||+|++
T Consensus 262 k~~~rL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~~~~~~~GNt~sASipla 341 (460)
T 2wya_A 262 KSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYGC 341 (460)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHCGGGGGGTTCCGGGGGTCHHHHHHHHHHHHHHHHHHTGGGGHHHHHHCCCGGGHHHHH
T ss_pred HHHHHhcchhhhhcccchhhhhhhhhhhhcCCchhhhhhhhHHHHHHHHHHHHHhhcchhhhhhHHHhhCCcchhhHHHH
Confidence 7776664321 122334678999999999999999
Q ss_pred HHHHHHc--CCCCCCCeEEEEeeccchhhcceeeeeeccCCc
Q 044359 345 LCYLEAK--GKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDP 384 (401)
Q Consensus 345 L~~~~~~--g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~ 384 (401)
|.+++++ +++++||+|+|++||+|+++..+.+++.+...+
T Consensus 342 L~~ll~~~~~~~~~GdrIll~~fGSGl~s~~fs~~v~~~~~~ 383 (460)
T 2wya_A 342 LASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAAP 383 (460)
T ss_dssp HHHHHHHSCHHHHTTCEEEEEEEETTTEEEEEEEEECSCCST
T ss_pred HHHHHHhccccCCCCCEEEEEEecCCccceEEEEEEeCCccc
Confidence 9999864 466799999999999999999999998876543
No 41
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=99.92 E-value=2.2e-24 Score=205.45 Aligned_cols=244 Identities=14% Similarity=0.164 Sum_probs=159.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 75 REETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 75 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
++...+|+.+|+++||+++|++++|||.||+++.+.+. ..++.++++|| +++||+++ +|+|++.||.+|..+|
T Consensus 52 e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~--~~A~~va~~Lg----ipafdV~~-ACsg~~~AL~~Aa~~I 124 (347)
T 3lma_A 52 EMAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQN--VTANYVARHLK----IPFLCLFG-ACSTSMESIAISSALI 124 (347)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSS--TTHHHHHHHHC----CCEEEBCC-STTHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCch--hHHHHHHHHhC----CCEEEecC-hhHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999854333 37889999995 46999995 9999999999999999
Q ss_pred HcCCCCeEEEEeeccccCCC---CCCCCcc--hhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCcccccc
Q 044359 155 KVHKNSLALVLSMEAISSNG---YTGSTKS--MLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSS 229 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~~~---~~~~d~~--~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 229 (401)
++|..++||||++|.+|... .+..+.. ...+..+++|||+|+||++.+.. .++.+. +.++..+
T Consensus 125 ~sG~~~~VLVVGaE~~S~aerq~r~p~e~g~q~p~ta~~t~dGAGA~VL~~~g~~-----p~I~~~------t~Gkvvd- 192 (347)
T 3lma_A 125 DGGFAKRALAATSSHNATAERQFRYPTEYGGQKPGTATSTVTGSGAVVLSQQPGG-----IKITSA------TVGRVID- 192 (347)
T ss_dssp HTTSCSEEEEEEEECGGGTTCCC----------------CCCEEEEEEEESSCCS-----EEEEEE------ECCCCBC-
T ss_pred hcCCCCEEEEEEeccccchhhhccCcchhcccCCchhcEEccceeEEEEEecCCC-----Cceeee------eeeeeec-
Confidence 99999999999999998642 1111110 12256888999999999975532 122221 1122121
Q ss_pred ccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEe---ecCCCh
Q 044359 230 VFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFC---IHAGGR 306 (401)
Q Consensus 230 ~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i---~Hq~~~ 306 (401)
+...+. .+ .....+...-+++.+.++. .++. ++|+|+++ +||.|.
T Consensus 193 -~g~~d~-~n----mg~amaPaA~~ti~~~l~d-----------------------~g~~---~~d~D~ivtgdL~q~g~ 240 (347)
T 3lma_A 193 -LGITDS-QD----MGSAMAPAAADTIKQHLED-----------------------LGRT---PDDYDLILTGDLSGVGS 240 (347)
T ss_dssp -CSCCCT-TC----HHHHHHHHHHHHHHHHHHH-----------------------HTCC---GGGCSEEEEESCHHHHH
T ss_pred -cCCCCC-CC----ccccchHHHHHHHHHHHHH-----------------------hCCC---HHHcCEEecCChHHHHH
Confidence 000000 00 0000111111122222111 2454 89999999 889999
Q ss_pred HHHHHHHHHcCCCchhhhhhHH-HHhhhcCcc--------cchHHHHHHHHHHcCCCCC--CCeEEEEeeccchhhc
Q 044359 307 AIIDAVEENLKLSKEDGEASRM-TLYRFGNTS--------SSSYWYELCYLEAKGKVKK--GDRVWQIAFGSGFKVN 372 (401)
Q Consensus 307 ~~~~~~~~~lgi~~e~~~~s~~-~~~~~Gn~~--------sasi~~~L~~~~~~g~l~~--Gd~vll~~~G~G~s~~ 372 (401)
+|++.+.+++|++.++... + -+.-|+|.. ++....+|...+-. +++. .++||++++|+.+|-.
T Consensus 241 ~il~~l~~~~g~~~~~~~~--dcg~~iy~~~~~~~~ggsg~~csa~v~~~~~~~-~~~~g~~~ril~~~tGalls~~ 314 (347)
T 3lma_A 241 PILKDLLKEEGINVGTKHN--DCGLMIYTPDQQVFAGGSGCACSAVVTFAHIFK-EIEAGRLNRVLVVATGALLSPT 314 (347)
T ss_dssp HHHHHHHHHTTCCCGGGEE--EGGGTSSCC---------CCCCHHHHHHHTHHH-HHHTTSCSEEEEEEEEECCCHH
T ss_pred HHHHHHHHHcCCChhHCcc--ccceEEecCCCcccCCCCccccHHHHHHHHHHH-HHhcCcccEEEEEecccccCcc
Confidence 9999999999999988752 1 345555544 47777777654332 2332 3689999999998743
No 42
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=99.82 E-value=5e-19 Score=175.21 Aligned_cols=94 Identities=17% Similarity=0.239 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|++++|||.|++++. ++...|..+..++..||++.++++++++ .+|+|++.||..|..+|++
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~~~v~-~~Css~~~al~~A~~~I~~ 107 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPSYTVN-KLCGSGLKSVQLAAQSITS 107 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCEEEEC-CGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceEEEcc-ccchHHHHHHHHHHHHHhC
Confidence 5799999999999999999999999999874 5556788999999999997679999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..++|||+++|.+|.
T Consensus 108 G~~~~vlv~g~e~~s~ 123 (395)
T 4e1l_A 108 GENDVVIAGGTENMSQ 123 (395)
T ss_dssp TSCSEEEEEEEEETTT
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999999875
No 43
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=99.81 E-value=7.1e-19 Score=174.01 Aligned_cols=94 Identities=14% Similarity=0.267 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
+.+|+.+|+++||+++|++++|||.+++++. ++...|..+..++..||++.++++++++ .+|+|++.||..|.++|++
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p~~~v~-~aCss~~~al~~A~~~I~~ 107 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGYTIQ-RQCSSGMQAIMSAAMQIQL 107 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCEEEEEE-CGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCceEEEec-CcchHHHHHHHHHHHHHhC
Confidence 5799999999999999999999999999874 5556788999999999997679999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..++|||+++|.+|.
T Consensus 108 G~~~~vlv~G~e~~s~ 123 (394)
T 3ss6_A 108 GVSEVVVAGGVEAMSS 123 (394)
T ss_dssp TSCSEEEEEEEEECTT
T ss_pred CCCCEEEEEEEhhccC
Confidence 9999999999999875
No 44
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=99.80 E-value=1.4e-18 Score=171.96 Aligned_cols=94 Identities=20% Similarity=0.279 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
+.+|+.+|+++||+++|++++|||.|++++ ++++..|..+.+++..||+++++++++++ .+|+|++.||..|..+|++
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~aCss~~~al~~A~~~I~~ 109 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTIN-IVCGSGLRSVSMASQLIAL 109 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEEC-CGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCceEEEec-cccHHHHHHHHHHHHHHhc
Confidence 579999999999999999999999999987 46667889999999999998679999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..++|||+++|.+|.
T Consensus 110 G~~~~vLv~g~e~~s~ 125 (396)
T 4dd5_A 110 GDADIMLVGGAENMSM 125 (396)
T ss_dssp TSCSEEEEEEEEESTT
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999999876
No 45
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=99.77 E-value=3.6e-17 Score=163.41 Aligned_cols=314 Identities=13% Similarity=0.064 Sum_probs=193.4
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceec-CCCccCCCCCC--ChH--HHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCI-PLNLHEMQPDV--SLK--RSRE 76 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~~~~~~~~--~l~--~~~~ 76 (401)
++|.|+|+|+..|.. .+.+++.+.+.. +.-.-..+ .+ ++..+...|.-. .++. .++. +-+ ....
T Consensus 18 ~~v~I~G~g~~~p~g---~~~~~~w~~l~~-g~~~i~~~---~~-~~~~~~~~~~~~~v~~f---d~~~~i~~~~~~~~d 86 (427)
T 3ho9_A 18 RRVVVTGLGMLSPVG---NTVESTWKALLA-GQSGISLI---DH-FDTSAYATKFAGLVKDF---NCEDIISRKEQRKMD 86 (427)
T ss_dssp CCEEEEEEEEEBTTB---SSHHHHHHHHHT-TCCCEEEC---CS-SCCTTCSCCEEECCSSC---CCTTTSCHHHHTTSC
T ss_pred CCEEEEeeeEECCCC---CCHHHHHHHHHc-CCCceeeC---Cc-cccccCccceeeEcCCC---ChhhcCCHHHHhhCC
Confidence 479999999999998 688999887642 11100000 00 000111222110 0101 0100 000 0112
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcC----EEEEeeec---------------------------CCCCCcHHHHHHHHcC
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSID----ILVTNCSI---------------------------FCPTPSISSMIINKFG 125 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~---------------------------~~~~p~~a~~l~~~LG 125 (401)
....|+.+|+++||+++|+++++|| .++++++. ....+..+.+|+..||
T Consensus 87 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 166 (427)
T 3ho9_A 87 AFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYG 166 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhC
Confidence 3568999999999999999999999 57776531 1223457889999999
Q ss_pred CCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCC-----------------------CCCCCcch
Q 044359 126 FRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNG-----------------------YTGSTKSM 182 (401)
Q Consensus 126 l~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~-----------------------~~~~d~~~ 182 (401)
+. .++++++ .+|+|++.||..|.++|++|.++.|||+++|.++... .++.++
T Consensus 167 l~--Gp~~~v~-taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~-- 241 (427)
T 3ho9_A 167 LR--GPSISIA-TAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKER-- 241 (427)
T ss_dssp CC--SCEECCC-CGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTC--
T ss_pred CC--CCeeccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCccCCC--
Confidence 97 4899999 5999999999999999999999999999999985210 001122
Q ss_pred hhhhhcccccceEEEEecCCCCc--c-ccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHH
Q 044359 183 LISNTVFRMGGAAILLSNRQQDK--H-IAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRIN 259 (401)
Q Consensus 183 ~i~~~lfGDGAaA~ll~~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 259 (401)
..+++||||+|+||++.+... . +...++.+ .....|+.. +..+. .+. ....+.++..
T Consensus 242 --~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g---~~~~~dg~~---~~~p~-----------~~~-~~~~~ai~~a 301 (427)
T 3ho9_A 242 --DGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVG---FGMSSDAYH---MTSPP-----------ENG-AGAALAMANA 301 (427)
T ss_dssp --CSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEE---EEEEECCSB---TTBCC-----------TTC-HHHHHHHHHH
T ss_pred --CCceeeeeEEEEEEccHHHHHHCCCcEEEEEEE---EeecCCCCC---cCCCC-----------CCH-HHHHHHHHHH
Confidence 357899999999999754211 0 11122332 222223211 00000 000 0011112211
Q ss_pred HHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeec-----CCChHHHHHHHHHcCCCchhhhhhHHHHhhhc
Q 044359 260 ISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIH-----AGGRAIIDAVEENLKLSKEDGEASRMTLYRFG 334 (401)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~H-----q~~~~~~~~~~~~lgi~~e~~~~s~~~~~~~G 334 (401)
+++ +++. ++|||++.+| +++..-...+.+.++.+.+++..+ .....+|
T Consensus 302 l~~-----------------------Agl~---~~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~-s~k~~~G 354 (427)
T 3ho9_A 302 LRD-----------------------AGIE---ASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVS-STKSMTG 354 (427)
T ss_dssp HHH-----------------------HTCC---GGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEE-CTHHHHC
T ss_pred HHH-----------------------cCCC---HHHccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEEe-cchHhhc
Confidence 111 3565 7999999999 777777788888898877776432 4567799
Q ss_pred CcccchHHHHHHH---HHHcCCCC-------------------------CCCeEEEEeeccchhhcceeeee
Q 044359 335 NTSSSSYWYELCY---LEAKGKVK-------------------------KGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 335 n~~sasi~~~L~~---~~~~g~l~-------------------------~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
|+.+|+=.+.+.. .++.+.+. +..+++.-+||.|-+.++++|+.
T Consensus 355 H~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 355 HLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp BCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBCCBSSCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccccccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 9999984444433 33333211 34667888999998888888873
No 46
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.76 E-value=2.5e-17 Score=164.49 Aligned_cols=316 Identities=12% Similarity=0.108 Sum_probs=190.3
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCC---CChHH--HHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPD---VSLKR--SRE 76 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~---~~l~~--~~~ 76 (401)
++|.|+|+|+..|.. .+.+++.+.+..- ...-..+ .+ ++..+...+ +... . .+.+. .+-++ ...
T Consensus 3 ~~vaI~G~g~~~p~g---~~~~~~w~~l~~g-~~~i~~~---~~-~~~~~~~~~-~~~~-~-~fd~~~~~i~~~~~~~~d 71 (424)
T 1tqy_A 3 RRVVITGVGVRAPGG---NGTRQFWELLTSG-RTATRRI---SF-FDPSPYRSQ-VAAE-A-DFDPVAEGFGPRELDRMD 71 (424)
T ss_dssp CCEEEEEEEEEETTE---ESHHHHHHHHHHT-CCCEEEC---CS-SCCTTSSCC-EEEC-C-CCCHHHHTCCHHHHHHSC
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHcC-CCceeeC---CC-cccccCCcc-eeEE-e-ccCHhhcCCCHHHHHhcC
Confidence 379999999999998 6888888876421 1000000 00 000001111 0000 0 00000 00000 112
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcC----EEEEeee-cCC---------------------------CCCcH-HH----H
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSID----ILVTNCS-IFC---------------------------PTPSI-SS----M 119 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~-~~~---------------------------~~p~~-a~----~ 119 (401)
...+|+.+|+++||+++|+++++|| .|+++++ .++ ..|+. +. +
T Consensus 72 ~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 151 (424)
T 1tqy_A 72 RASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAE 151 (424)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhH
Confidence 3468999999999999999999999 5877763 221 11222 34 9
Q ss_pred HHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccc-cCC----------CCC------------
Q 044359 120 IINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAI-SSN----------GYT------------ 176 (401)
Q Consensus 120 l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~-s~~----------~~~------------ 176 (401)
|+..||+. .++++++ .+|+|++.||..|.++|++|..+.|||+++|.+ +.. +..
T Consensus 152 ia~~lgl~--gp~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpf 228 (424)
T 1tqy_A 152 VAWAVGAE--GPVTMVS-TGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPF 228 (424)
T ss_dssp HHHHHTCC--SCEEEEC-CGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCCCTT
T ss_pred HHHhcCCC--CceEeec-CcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCccCC
Confidence 99999997 4899999 599999999999999999999999999999984 220 110
Q ss_pred CCCcchhhhhhcccccceEEEEecCCCCc--cccc-eEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHH
Q 044359 177 GSTKSMLISNTVFRMGGAAILLSNRQQDK--HIAK-YKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAA 253 (401)
Q Consensus 177 ~~d~~~~i~~~lfGDGAaA~ll~~~~~~~--~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 253 (401)
+.++ ..+++||||+|+||++.+... .... -++.+ +....|+... ..+ . .+. ....
T Consensus 229 d~~~----~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g---~~~~~dg~~~---~~p-~----------~~g-~~~~ 286 (424)
T 1tqy_A 229 DGTR----DGFVLAEGAAMFVLEDYDSALARGARIHAEISG---YATRCNAYHM---TGL-K----------ADG-REMA 286 (424)
T ss_dssp BTTC----CCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEE---EEEEECSSCS---SCC-C----------TTC-HHHH
T ss_pred CCCC----CceeeecceeEEEeccHHHHHhCCCcEEEEEee---eEEcCCCCCC---CCC-C----------CCH-HHHH
Confidence 0111 358899999999998754311 0011 12322 2222232211 000 0 000 0111
Q ss_pred HHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHH-----HHHHHcCCCchhhhhhHH
Q 044359 254 RALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIID-----AVEENLKLSKEDGEASRM 328 (401)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~-----~~~~~lgi~~e~~~~s~~ 328 (401)
+.++..+++ +++. ++|||++.+|+.+..+.+ .+.+.++...+++..+ .
T Consensus 287 ~ai~~al~~-----------------------agl~---~~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~-s 339 (424)
T 1tqy_A 287 ETIRVALDE-----------------------SRTD---ATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVS-S 339 (424)
T ss_dssp HHHHHHHHH-----------------------HTCC---GGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEE-C
T ss_pred HHHHHHHHH-----------------------cCCC---HHHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeee-c
Confidence 122221111 3565 799999999999877543 4555666544444321 2
Q ss_pred HHhhhcCcccchHHHHHHH---HHHcCCCC------------------------CCCeEEEEeeccchhhcceeeeeec
Q 044359 329 TLYRFGNTSSSSYWYELCY---LEAKGKVK------------------------KGDRVWQIAFGSGFKVNSAVWKCVS 380 (401)
Q Consensus 329 ~~~~~Gn~~sasi~~~L~~---~~~~g~l~------------------------~Gd~vll~~~G~G~s~~~~~l~~~~ 380 (401)
+-..+||+.+|+-.+.|.. .++.+.+. +.++++.-+||.|.+.++++|+...
T Consensus 340 ~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfG~GG~n~~~vl~~~~ 418 (424)
T 1tqy_A 340 IKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAE 418 (424)
T ss_dssp THHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred cccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEccccCCceEEEEEEccCC
Confidence 3567899999988777765 44455432 4577889999999999999998643
No 47
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=99.76 E-value=4.3e-17 Score=162.20 Aligned_cols=315 Identities=13% Similarity=0.071 Sum_probs=185.0
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCC--ChH--HHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDV--SLK--RSREE 77 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~--~l~--~~~~~ 77 (401)
++|.|+|+|++.|.. .+.+++.+.+.. +.....+. .+ ++..+...+. ... ...+.++. +-+ ...+.
T Consensus 4 ~~v~ItG~g~~~P~g---~~~~~~w~~l~~-g~~~i~~~---~~-~~~~~~~~~~-~~~-v~~fd~~~~i~~~~~~~~d~ 73 (413)
T 3o04_A 4 RRVVVTGIGAVTPIG---NDAETSWENAKK-GVNGVAKM---TR-LNPDDFPVKI-AAE-LKDFDVEKYLEKKEARKMDR 73 (413)
T ss_dssp CCEEEEEEEEEBTTB---SSHHHHHHHHHT-TCCCEEEC---CS-SCGGGSSCCE-EEC-CSSCCGGGTSCHHHHTTSCH
T ss_pred CCEEEEEeEEECCCC---CCHHHHHHHHHc-CCCceeeC---Cc-cccccCcccc-ccc-cCCCChhhccCHHHHhhCCH
Confidence 579999999999998 799999887642 11100000 00 0000011111 000 00000000 000 01123
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcC----EEEEeeec------------------CCCCCc---------HHHHHHHHcCC
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSID----ILVTNCSI------------------FCPTPS---------ISSMIINKFGF 126 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~------------------~~~~p~---------~a~~l~~~LGl 126 (401)
...|+.+|+++||+++|+++++|| .|+++++. +...|. .+.+|+..||+
T Consensus 74 ~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 153 (413)
T 3o04_A 74 FTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGA 153 (413)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCC
Confidence 568999999999999999999999 88888641 122232 37899999999
Q ss_pred CCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccc---------------cCCCCC-------CCCcchhh
Q 044359 127 RSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAI---------------SSNGYT-------GSTKSMLI 184 (401)
Q Consensus 127 ~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~---------------s~~~~~-------~~d~~~~i 184 (401)
+ .++++++ .+|+|++.||..|.++|++|.++.|||+++|.+ +...++ +.++
T Consensus 154 ~--gp~~~v~-~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~---- 226 (413)
T 3o04_A 154 K--GINSTTV-TACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDKDR---- 226 (413)
T ss_dssp C--SCEECCC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSCCTTBTTC----
T ss_pred C--Ccceeec-chhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCcCCCcCCC----
Confidence 6 4899999 599999999999999999999999999999982 211111 1112
Q ss_pred hhhcccccceEEEEecCCCCcc---ccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHH
Q 044359 185 SNTVFRMGGAAILLSNRQQDKH---IAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINIS 261 (401)
Q Consensus 185 ~~~lfGDGAaA~ll~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~ 261 (401)
..+++||||+|+||++.+.... ....++.+ .....|+... ..+ ..+. ....+.++..++
T Consensus 227 ~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g---~~~~~dg~~~---~~~-----------~~~~-~~~~~a~~~al~ 288 (413)
T 3o04_A 227 DGFIIGEGAGIVILEEYEHAKARGAKIYAEIVG---YGATGDAYHI---TAP-----------APNG-EGAARAMKMAID 288 (413)
T ss_dssp CSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEE---EEEEECCSCS---SSC-----------CGGG-HHHHHHHHHHHH
T ss_pred CCceEeccEEEEEEeeHHHHHhCCCeEEEEEEE---EEEcCCCCCC---CCC-----------CCCH-HHHHHHHHHHHH
Confidence 3578999999999997543210 01122322 2222222110 000 0000 001111221111
Q ss_pred hhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHH-----HHHHcCCCchhhhhhHHHHhhhcCc
Q 044359 262 QLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDA-----VEENLKLSKEDGEASRMTLYRFGNT 336 (401)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~-----~~~~lgi~~e~~~~s~~~~~~~Gn~ 336 (401)
+ +++. ++|||++.+|..+....+. +.+.++...+++.. ...-..+||+
T Consensus 289 ~-----------------------agl~---~~dId~ve~HgtgT~~~d~~e~~al~~~~~~~~~~~~v-~s~k~~~GH~ 341 (413)
T 3o04_A 289 D-----------------------AGLT---PDKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAI-SSTKSMTGHT 341 (413)
T ss_dssp H-----------------------HTCC---GGGCCEEECCCCCCHHHHHHHHHHHHHHHGGGTTTSEE-ECTHHHHCBC
T ss_pred H-----------------------cCCC---HHHcCEEEEeCCcCcccCHHHHHHHHHHhcccCCCCce-eccccccccc
Confidence 1 3565 7999999999988765543 33445544344432 1345667999
Q ss_pred ccchHHHHHHHH---HHcCCC------------------------CCCCeEEEEeeccchhhcceeeee
Q 044359 337 SSSSYWYELCYL---EAKGKV------------------------KKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 337 ~sasi~~~L~~~---~~~g~l------------------------~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
.+|+=...+..+ ++.+.+ .+..+++.-+||.|-+-++++++.
T Consensus 342 ~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfgfgG~na~~vl~~ 410 (413)
T 3o04_A 342 LGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVPNEAREANVNVVISNSFGFGGHNATLVFKR 410 (413)
T ss_dssp GGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCCCBSSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCceEEEEEEEe
Confidence 988855544432 333321 123456678999998888888875
No 48
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=99.76 E-value=1.6e-16 Score=159.05 Aligned_cols=315 Identities=10% Similarity=0.048 Sum_probs=190.7
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecC-CCcc---CCCCCCChHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIP-LNLH---EMQPDVSLKRSREE 77 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~-~~~~---~~~~~~~l~~~~~~ 77 (401)
++|.|+|+|+..|.. .+.+++.+.+.. +...-..+ .+ ++..++..|.... +++. .+++.. ......
T Consensus 28 ~~vaI~G~g~~~P~g---~~~~~~w~~l~~-g~~~i~~~---~~-~~~~~~~~~~~~~i~~fd~~~~~~~~~--~~~~d~ 97 (437)
T 2gqd_A 28 KRVVITGMGALSPIG---NDVKTTWENALK-GVNGIDKI---TR-IDTEPYSVHLAGELKNFNIEDHIDKKE--ARRMDR 97 (437)
T ss_dssp CCEEEEEEEEEBTTB---SSHHHHHHHHHT-TCCCEEEC---CS-SCCTTSSCCEEECCSSCCGGGTSCSTT--TTTSCH
T ss_pred CCEEEEEeeEECCCC---CCHHHHHHHHHc-CCCceeeC---Cc-cccccCccceeEEeCCCChhcCCCHHH--HHhcCH
Confidence 469999999999998 688998886642 11110000 00 0111222222110 0000 011110 011123
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcC----EEEEeee-cC-----------------CC---------CCcHHHHHHHHcCC
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSID----ILVTNCS-IF-----------------CP---------TPSISSMIINKFGF 126 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~-~~-----------------~~---------~p~~a~~l~~~LGl 126 (401)
..+|+.+|+++||+++|+++++|| .|+++++ .+ .. .+..+.+|+..||+
T Consensus 98 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 177 (437)
T 2gqd_A 98 FTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGA 177 (437)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCC
Confidence 568999999999999999999999 8988864 22 01 22578899999999
Q ss_pred CCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccc-cCC--------------------CCC-CCCcchhh
Q 044359 127 RSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAI-SSN--------------------GYT-GSTKSMLI 184 (401)
Q Consensus 127 ~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~-s~~--------------------~~~-~~d~~~~i 184 (401)
. .++++++ .+|+|++.||..|.++|++|..+.|||+++|.+ +.. ..+ +.++
T Consensus 178 ~--gp~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~---- 250 (437)
T 2gqd_A 178 K--GPNGATV-TACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGR---- 250 (437)
T ss_dssp C--SSEECBC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTCTTC----
T ss_pred C--CceEEec-CCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCCCCC----
Confidence 6 3899999 599999999999999999999999999999973 211 011 1112
Q ss_pred hhhcccccceEEEEecCCCCc--cccc-eEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHH
Q 044359 185 SNTVFRMGGAAILLSNRQQDK--HIAK-YKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINIS 261 (401)
Q Consensus 185 ~~~lfGDGAaA~ll~~~~~~~--~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~ 261 (401)
..+++||||+|+||++.+... .... -++.+ +....|+.. +..+ . .+. ....+.++..++
T Consensus 251 ~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g---~~~~~dg~~---~~~p-~----------~~~-~~~~~ai~~Al~ 312 (437)
T 2gqd_A 251 DGFVMGEGAGILVIESLESAQARGANIYAEIVG---YGTTGDAYH---ITAP-A----------PEG-EGGSRAMQAAMD 312 (437)
T ss_dssp CSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEE---EEEEECCSC---SSSC-C----------GGG-HHHHHHHHHHHH
T ss_pred CCceeeceEEEEEECcHHHHHhCCCceEEEEEE---EEecCCCCC---CCCC-C----------CCH-HHHHHHHHHHHH
Confidence 368999999999998754311 0011 12332 222223211 1100 0 000 001111221111
Q ss_pred hhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHH-----HHHHHcCCCchhhhhhHHHHhhhcCc
Q 044359 262 QLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIID-----AVEENLKLSKEDGEASRMTLYRFGNT 336 (401)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~-----~~~~~lgi~~e~~~~s~~~~~~~Gn~ 336 (401)
+ +++. ++|||+|.+|+.+..+.+ .+.+.++.+.+++..+ .+-..+||+
T Consensus 313 ~-----------------------Agl~---p~dId~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~-s~k~~~GH~ 365 (437)
T 2gqd_A 313 D-----------------------AGIE---PKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVS-STKSMTGHL 365 (437)
T ss_dssp H-----------------------HTCC---GGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEE-CTHHHHCBC
T ss_pred H-----------------------cCCC---HhhCCEEEEECCCCcCcCHHHHHHHHHHHhccCCCceee-cchhhhcCC
Confidence 1 3565 799999999999988644 4556676544454321 345668999
Q ss_pred ccchHHHHHHHH---HHcCCCC------------------------CCCeEEEEeeccchhhcceeeee
Q 044359 337 SSSSYWYELCYL---EAKGKVK------------------------KGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 337 ~sasi~~~L~~~---~~~g~l~------------------------~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
.+|+=.+.|... ++.+.+. +..+++.-+||.|-+-++++|+-
T Consensus 366 ~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 434 (437)
T 2gqd_A 366 LGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKK 434 (437)
T ss_dssp GGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBCCBSSCEECCCSEEEEEEECGGGEEEEEEEEC
T ss_pred hhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCCCccccCCCCEEEEccCcCCCeeEEEEEEe
Confidence 998866665543 3333321 23567788999998888888864
No 49
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.75 E-value=8.9e-17 Score=159.70 Aligned_cols=314 Identities=14% Similarity=0.104 Sum_probs=190.6
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCC--ChH--HHHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDV--SLK--RSRE 76 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~--~l~--~~~~ 76 (401)
+++|.|+|+|+..|.. .+.+++.+.+.. +...-..+ .+ ++..+...+....-+. .++. +-+ ...+
T Consensus 1 M~~v~I~G~g~~~p~g---~~~~~~w~~l~~-g~~~~~~~---~~-~~~~~~~~~~~~~~~f---d~~~~~~~~~~~~~d 69 (408)
T 1j3n_A 1 MRRVVVTGLGALTPIG---VGQEAFHKAQLA-GKSGVRPI---TR-FDASALPVRIAAEVDV---DPGAYLDRKELRRLD 69 (408)
T ss_dssp CCCEEEEEEEEEETTE---ESHHHHHHHHHH-TCCCEEEC---CS-SCCTTSSCCEEECCCC---CGGGTSCHHHHTTSC
T ss_pred CCCEEEEEeEEECCCC---CCHHHHHHHHHc-CCCeeeec---cc-cCcccCccceEEEEcc---ChhhcCCHHHHHhcC
Confidence 4679999999999998 688999886542 11100000 00 0000111111000000 0000 000 0112
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCE----EEEeee-cCC-----------------C--------CC-cHHHHHHHHcC
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDI----LVTNCS-IFC-----------------P--------TP-SISSMIINKFG 125 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~-~~~-----------------~--------~p-~~a~~l~~~LG 125 (401)
...+|+.+|+++||+++|+++++||. ++++++ .++ . .| ..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence 35789999999999999999999994 566553 221 0 23 46889999999
Q ss_pred CCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccc-cCC----------CC-----------C-CCCcch
Q 044359 126 FRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAI-SSN----------GY-----------T-GSTKSM 182 (401)
Q Consensus 126 l~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~-s~~----------~~-----------~-~~d~~~ 182 (401)
++ .++++++ .+|+|++.||..|.++|++|..+.|||+++|.+ +.. +. + +.++
T Consensus 150 l~--gp~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~-- 224 (408)
T 1j3n_A 150 FT--GPSSTVV-TACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSR-- 224 (408)
T ss_dssp CC--SCBCCBC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTC--
T ss_pred CC--CceeCcc-CchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCCC--
Confidence 96 3899999 599999999999999999999999999999974 221 11 0 0112
Q ss_pred hhhhhcccccceEEEEecCCCCc--c-ccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHH
Q 044359 183 LISNTVFRMGGAAILLSNRQQDK--H-IAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRIN 259 (401)
Q Consensus 183 ~i~~~lfGDGAaA~ll~~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 259 (401)
..+++||||+|+||++.+... . +...++.+ .....|+... ..+ . .+. ....+.++..
T Consensus 225 --dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g---~~~~~d~~~~---~~p-~----------~~~-~~~~~ai~~a 284 (408)
T 1j3n_A 225 --DGFVMGEGAGVLVLEAYEHAKKRGARIYAELVG---FGRSADAHHI---TEP-H----------PEG-KGAALAMARA 284 (408)
T ss_dssp --CCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEE---EEEEECCSCS---SCC-C----------TTC-HHHHHHHHHH
T ss_pred --CceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEE---EEEcCCCCCC---CCC-C----------CCH-HHHHHHHHHH
Confidence 368899999999998754311 0 01112222 2122232110 000 0 000 0011112211
Q ss_pred HHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHH-----HHHHHHHcCCCchhhhhhHHHHhhhc
Q 044359 260 ISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAI-----IDAVEENLKLSKEDGEASRMTLYRFG 334 (401)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~-----~~~~~~~lgi~~e~~~~s~~~~~~~G 334 (401)
+++ +++. ++|||++.+|+.+..+ +..+.+.||.+.+++..+ ..-..+|
T Consensus 285 l~~-----------------------Agl~---~~dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~-s~k~~~G 337 (408)
T 1j3n_A 285 LKD-----------------------AGIA---PEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVS-STKSMIG 337 (408)
T ss_dssp HHH-----------------------HTCC---GGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEE-CTHHHHC
T ss_pred HHH-----------------------cCCC---HHHcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceEE-Cchhhhc
Confidence 111 3565 7999999999998876 566777888766666421 3457899
Q ss_pred CcccchHHHHHHHH---HHcCCCC-----------------------CCCeEEEEeeccchhhcceeee
Q 044359 335 NTSSSSYWYELCYL---EAKGKVK-----------------------KGDRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 335 n~~sasi~~~L~~~---~~~g~l~-----------------------~Gd~vll~~~G~G~s~~~~~l~ 377 (401)
|+.+|+-.+.|... ++.+.+. +..+++.-+||.|-+-++++|+
T Consensus 338 H~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfGG~na~~vl~ 406 (408)
T 1j3n_A 338 HLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFK 406 (408)
T ss_dssp BCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEE
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCCCCcCCCCCEEEEecccCCcceEEEEEe
Confidence 99999987766543 3333211 2356788899998888888886
No 50
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=99.74 E-value=6.7e-17 Score=161.44 Aligned_cols=318 Identities=13% Similarity=0.075 Sum_probs=193.5
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecC-C----CccCCCCCC--ChHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIP-L----NLHEMQPDV--SLKR 73 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~-~----~~~~~~~~~--~l~~ 73 (401)
++.|.|+|+|...|-- .+.+++.+.+.. +.-.-..+ .+ ++..+...+.... + +...+.++. +-+.
T Consensus 9 ~~~~viTG~G~vsp~g---~~~~~~w~~L~~-G~s~i~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~ 80 (428)
T 3kzu_A 9 MRRVVITGLGLVSPLA---SGVEETWKRLLA-GESGARRV---TE-FEVDDLACQIACRIPVGDGTNGTFNPDLHMDPKE 80 (428)
T ss_dssp CCCEEEEEEEEECSSC---BSHHHHHHHHHT-TCCCEEEC---CS-SCCTTSSCCEEECCCBSSSSTTCBCGGGTSCHHH
T ss_pred ccceEEEeceEECCCc---CCHHHHHHHHHc-CCCeeeeC---Cc-cccccCcCceeeEecccccccccCChhhcCCHHH
Confidence 4689999999999998 799999987642 11100000 00 0000111111000 0 000000000 0000
Q ss_pred --HHHHHHHHHHHHHHHHHHhCCCCcCC-cC----EEEEeee---------------------------cCCCCCcHHHH
Q 044359 74 --SREETEEVLCTIVKDLLSKHKINPKS-ID----ILVTNCS---------------------------IFCPTPSISSM 119 (401)
Q Consensus 74 --~~~~~~~la~~Aa~~aL~~ag~~~~d-Id----~li~~s~---------------------------~~~~~p~~a~~ 119 (401)
.......|+.+|+++||+++|+++++ || .++++++ +....+..+.+
T Consensus 81 ~~~~d~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (428)
T 3kzu_A 81 QRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGH 160 (428)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHH
Confidence 11235789999999999999999998 87 5666543 12334557889
Q ss_pred HHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccc---------------cCC---------CC
Q 044359 120 IINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAI---------------SSN---------GY 175 (401)
Q Consensus 120 l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~---------------s~~---------~~ 175 (401)
|+..||+. .++++++ .+|+|++.||..|.++|++|.++.|||+++|.+ +.. ..
T Consensus 161 is~~lgl~--Gp~~~v~-taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~p 237 (428)
T 3kzu_A 161 VSIKHKLR--GPNHSVV-TACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRP 237 (428)
T ss_dssp HHHHHTCC--SCEECBC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCT
T ss_pred HHHHcCCC--Cceeeec-CccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCC
Confidence 99999996 4899999 599999999999999999999999999999982 211 00
Q ss_pred CCCCcchhhhhhcccccceEEEEecCCCCc--c-ccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHH
Q 044359 176 TGSTKSMLISNTVFRMGGAAILLSNRQQDK--H-IAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVA 252 (401)
Q Consensus 176 ~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 252 (401)
++.++ ..+++||||+|+||++.+... . +...++.+ .....|+.. +..+. .+. ...
T Consensus 238 fd~~~----~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g---~~~~~dg~~---~~~p~-----------~~~-~~~ 295 (428)
T 3kzu_A 238 YDEDR----DGFVMGEGAGIVVLEELEHALARGAKIYAEVIG---YGMSGDAFH---ITAPT-----------ESG-EGA 295 (428)
T ss_dssp TBTTC----CSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEE---EEEEECCSC---SSSCC-----------TTC-HHH
T ss_pred cccCC----CceeecCceEEEEEccHHHHHhCCCceEEEEEE---EEEccCCCC---CCCCC-----------CCH-HHH
Confidence 01112 367899999999999754321 0 11122222 212222211 00000 000 001
Q ss_pred HHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeec----CCChHHHHHHHHHcCCCchhhhhhHH
Q 044359 253 ARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIH----AGGRAIIDAVEENLKLSKEDGEASRM 328 (401)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~H----q~~~~~~~~~~~~lgi~~e~~~~s~~ 328 (401)
.+.++..+++ +++. ++|||++.+| +.+...++.+.+.++.+.+++..+ .
T Consensus 296 ~~ai~~al~~-----------------------Agl~---~~dId~ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v~-s 348 (428)
T 3kzu_A 296 QRCMVAALKR-----------------------AGIV---PDEIDYINAHGTSTMADTIELGAVERVVGEAAAKISMS-S 348 (428)
T ss_dssp HHHHHHHHHH-----------------------HTCC---GGGCCEEECCCCSSTTHHHHHHHHHHHHGGGGGGCEEE-C
T ss_pred HHHHHHHHHH-----------------------cCCC---HHHeeEEEecCCcchhhHHHHHHHHHHhccCCCceeeC-C
Confidence 1112211111 3565 7999999999 888888888999999887777532 4
Q ss_pred HHhhhcCcccchHHHHHHHH---HHcCCC------------------------CCCCeEEEEeeccchhhcceeeee
Q 044359 329 TLYRFGNTSSSSYWYELCYL---EAKGKV------------------------KKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 329 ~~~~~Gn~~sasi~~~L~~~---~~~g~l------------------------~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
....+||+.+|+=...+... ++.+.+ .+.++++.-+||.|-+-++++|+-
T Consensus 349 ~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 425 (428)
T 3kzu_A 349 TKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVPHKPRERKIDVALSNSFGFGGTNASLVLRR 425 (428)
T ss_dssp THHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred chhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCcccChhhEEEEEee
Confidence 56789999887766655443 333321 123567778999988888888863
No 51
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=99.74 E-value=3.5e-17 Score=162.34 Aligned_cols=94 Identities=13% Similarity=0.223 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHh-CCCCcCCcCEEEEeee-cCCC-CCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSK-HKINPKSIDILVTNCS-IFCP-TPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~-~~~~-~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
..+|+.+|+++||++ +|++++|||.||+++. ++.. .|+.+.+++..||++..+++++|+ .+|+|++.+|..|.++|
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~~pa~~v~-~~Css~~~Al~~A~~~I 110 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETTGGVQLN-RFCASGLEAVNTAAQKV 110 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTTCEEEEEC----CBSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCCCceEEec-CcChhHHHHHHHHHHHH
Confidence 579999999999999 9999999999999874 4432 678899999999996679999999 59999999999999999
Q ss_pred HcCCCCeEEEEeeccccC
Q 044359 155 KVHKNSLALVLSMEAISS 172 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~ 172 (401)
++|..++|||+++|.+|.
T Consensus 111 ~sG~~d~vLv~G~e~~s~ 128 (407)
T 3svk_A 111 RSGWDDLVLAGGVESMSR 128 (407)
T ss_dssp HHTSCCEEEEEEEECC--
T ss_pred HcCCCCEEEEEEEccccc
Confidence 999999999999999885
No 52
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=99.73 E-value=3.7e-16 Score=155.57 Aligned_cols=314 Identities=13% Similarity=0.067 Sum_probs=188.2
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCCh--H--HHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSL--K--RSREE 77 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l--~--~~~~~ 77 (401)
++|.|+|+|+..|.. .+.+++.+.+.. +...-..+ .+ ++..++..|.... ...+.++..+ + .....
T Consensus 7 ~~v~I~G~g~~~p~g---~~~~~~w~~l~~-g~~~i~~~---~~-~~~~~~~~~~~~~--i~~fd~~~~~~~~~~~~~d~ 76 (416)
T 1e5m_A 7 KRVVVTGLGAITPIG---NTLQDYWQGLME-GRNGIGPI---TR-FDASDQACRFGGE--VKDFDATQFLDRKEAKRMDR 76 (416)
T ss_dssp CCEEEEEEEEEBTTB---SSHHHHHHHHHT-TCCCEEEC---CS-SCCTTSSCCEEEC--CCSCCGGGTSCHHHHHTSCH
T ss_pred CCEEEEeeeEECCCC---CCHHHHHHHHHc-CCCeEeeC---Cc-cccccCccceeEE--eCCCCccccCCHHHHHhcCH
Confidence 469999999999998 688888887642 11110000 00 0111223332110 0001111001 0 11123
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcC----EEEEeee-cCC-----------------C---------CCcHHHHHHHHcCC
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSID----ILVTNCS-IFC-----------------P---------TPSISSMIINKFGF 126 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~-~~~-----------------~---------~p~~a~~l~~~LGl 126 (401)
..+|+.+|+++||+++|+++++|| .|+++++ .+. . ....+.+|+..||+
T Consensus 77 ~~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 156 (416)
T 1e5m_A 77 FCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA 156 (416)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCC
Confidence 468999999999999999999999 7887764 220 1 12468899999999
Q ss_pred CCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccc-cCC----------CC-----------C-CCCcchh
Q 044359 127 RSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAI-SSN----------GY-----------T-GSTKSML 183 (401)
Q Consensus 127 ~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~-s~~----------~~-----------~-~~d~~~~ 183 (401)
+ .++++++ .+|+|++.||..|.++|++|..+.|||+++|.+ +.. +. + +.++
T Consensus 157 ~--gp~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~--- 230 (416)
T 1e5m_A 157 K--GPNNCTV-TACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDR--- 230 (416)
T ss_dssp C--SCEECCC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTC---
T ss_pred C--CceeCcc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccCC---
Confidence 6 4899999 599999999999999999999999999999973 321 10 0 0112
Q ss_pred hhhhcccccceEEEEecCCCCc--cccc-eEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHH
Q 044359 184 ISNTVFRMGGAAILLSNRQQDK--HIAK-YKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINI 260 (401)
Q Consensus 184 i~~~lfGDGAaA~ll~~~~~~~--~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~ 260 (401)
..+++||||+|+||++.+... .... -++.+ +....|+.. +..+ ...+ ....+.++..+
T Consensus 231 -~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g---~~~~~d~~~---~~~p-~~~~-----------~~~~~ai~~al 291 (416)
T 1e5m_A 231 -DGFVMGEGSGILILEELESALARGAKIYGEMVG---YAMTCDAYH---ITAP-VPDG-----------RGATRAIAWAL 291 (416)
T ss_dssp -CSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEE---EEEEECCSC---SSSC-CTTC-----------HHHHHHHHHHH
T ss_pred -CCceeeeeEEEEEECcHHHHHHCCCeEEEEEEE---EEEccCCCC---CCCC-CCCH-----------HHHHHHHHHHH
Confidence 358899999999998754211 0011 12332 222223221 1111 0000 01111222221
Q ss_pred HhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHH-----HHHHHcCCCchhhhhhHHHHhhhcC
Q 044359 261 SQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIID-----AVEENLKLSKEDGEASRMTLYRFGN 335 (401)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~-----~~~~~lgi~~e~~~~s~~~~~~~Gn 335 (401)
++ +++. ++|||++.+|+.+..+.+ .+.+.++...+++..+ .+-..+||
T Consensus 292 ~~-----------------------agl~---~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~-s~k~~~GH 344 (416)
T 1e5m_A 292 KD-----------------------SGLK---PEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVS-STKSMTGH 344 (416)
T ss_dssp HH-----------------------HTCC---GGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEE-CTHHHHCB
T ss_pred HH-----------------------cCCC---HhHCCEEEEECCCCcCcCHHHHHHHHHHHcccCCCCeee-Ccchhhcc
Confidence 11 3565 799999999999987654 3455666554454321 34567899
Q ss_pred cccchHHHHHHH---HHHcCCCC------------------------CCCeEEEEeeccchhhcceeee
Q 044359 336 TSSSSYWYELCY---LEAKGKVK------------------------KGDRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 336 ~~sasi~~~L~~---~~~~g~l~------------------------~Gd~vll~~~G~G~s~~~~~l~ 377 (401)
+.+|+=.+.+.. .++.+.+. +-.+++.-+||.|-+-++++|+
T Consensus 345 ~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~ 413 (416)
T 1e5m_A 345 LLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFK 413 (416)
T ss_dssp CGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCccccCCCCEEEEccccCCCeeEEEEEE
Confidence 999886555443 33333311 2345677889988888888876
No 53
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=99.72 E-value=3.4e-16 Score=154.34 Aligned_cols=94 Identities=11% Similarity=0.221 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHhC-CCCcCCcCEEEEeee-cCCC-CCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKH-KINPKSIDILVTNCS-IFCP-TPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~a-g~~~~dId~li~~s~-~~~~-~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
..+|+.+|+++||+++ |++++|||.|++++. ++.. .|..+.+++..+|++..+++++|+ .+|+|++.||.+|.++|
T Consensus 27 ~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~aCss~l~Al~~A~~~I 105 (387)
T 3goa_A 27 AEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVN-RLCGSSMQALHDAARMI 105 (387)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEEE-CGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcEeEec-CcchHHHHHHHHHHHHH
Confidence 5699999999999999 999999999999874 5544 688999999999997679999999 59999999999999999
Q ss_pred HcCCCCeEEEEeeccccC
Q 044359 155 KVHKNSLALVLSMEAISS 172 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~ 172 (401)
++|..++|||+++|.+|.
T Consensus 106 ~sG~~d~vLv~G~e~~s~ 123 (387)
T 3goa_A 106 MTGDAQVCLVGGVEHMGH 123 (387)
T ss_dssp HTTSCSEEEEEEEECTTT
T ss_pred hCCCCCEEEEEEEecCCC
Confidence 999999999999998875
No 54
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=99.70 E-value=1.4e-16 Score=158.69 Aligned_cols=94 Identities=10% Similarity=0.210 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|+++++||.|+++++ +++..|..+..++..||++.+.++++++ .+|+|++.||..|.++|++
T Consensus 55 ~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~p~~~v~-~aCss~~~Al~~A~~~I~~ 133 (418)
T 2iik_A 55 PDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTVN-RQCSSGLQAVASIAGGIRN 133 (418)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEE-CGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCceEEEeC-CCCHHHHHHHHHHHHHHHC
Confidence 5799999999999999999999999998874 4444567778888999996578999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..+.|||+++|.+|.
T Consensus 134 G~~d~vLv~G~e~~s~ 149 (418)
T 2iik_A 134 GSYDIGMACGVESMSL 149 (418)
T ss_dssp TSCSEEEEEEEEETTT
T ss_pred CCCCEEEEeccccCcc
Confidence 9999999999998865
No 55
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.69 E-value=2.6e-15 Score=150.09 Aligned_cols=316 Identities=11% Similarity=0.041 Sum_probs=184.5
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecC-CCcc---CCCCCCChHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIP-LNLH---EMQPDVSLKRSREE 77 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~-~~~~---~~~~~~~l~~~~~~ 77 (401)
++|.|+|+|+..|.. .+.+++.+.+.. +......+ .+ ++..++..|.... ++.. .+++. .......
T Consensus 23 ~~v~ItG~g~~~P~g---~~~~~~w~~l~~-g~~~i~~~---~~-~~~~~~~~~~~~~v~~fd~~~~~~~~--~~~~~d~ 92 (430)
T 1ox0_A 23 NRVVVTGYGVTSPIG---NTPEEFWNSLAT-GKIGIGGI---TK-FDHSDFDVHNAAEIQDFPFDKYFVKK--DTNRFDN 92 (430)
T ss_dssp CCEEEEEEEEEBTTB---SSHHHHHHHHHH-TCCCEEEC---CS-SCCTTSSCCEEECCSSCCHHHHCCGG--GGGTCCH
T ss_pred CCEEEEEEEEECCCc---CCHHHHHHHHHc-CCCeeeeC---Cc-ccccCCccceeeeccCCChhhcCCHH--HHHhcCH
Confidence 469999999999998 688998887642 11100000 00 0111222222110 0000 00000 0001123
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcC----EEEEeee-cC---------------------CCC----C-cHHHHHHHHcCC
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSID----ILVTNCS-IF---------------------CPT----P-SISSMIINKFGF 126 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~-~~---------------------~~~----p-~~a~~l~~~LGl 126 (401)
..+|+.+|+++||+++|+++++|| .|+++++ .+ +.. + ..+.+|+..||+
T Consensus 93 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 172 (430)
T 1ox0_A 93 YSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGA 172 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcC
Confidence 568999999999999999999999 5777653 22 111 1 468899999999
Q ss_pred CCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------CC----CC-CC--cchhhhhhc
Q 044359 127 RSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------GY----TG-ST--KSMLISNTV 188 (401)
Q Consensus 127 ~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~----~~-~d--~~~~i~~~l 188 (401)
. .++++++ .+|+|++.||..|.++|++|..+.|||+++|.+... +. +. .. .+..-..++
T Consensus 173 ~--Gp~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd~~~~g~~ 249 (430)
T 1ox0_A 173 N--GVCKSIN-TACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNGFV 249 (430)
T ss_dssp C--SCEECCC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTBTTCCSBC
T ss_pred C--CceEeec-CchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCCCCCCCcc
Confidence 7 4899999 599999999999999999999999999999985321 11 00 00 000114689
Q ss_pred ccccceEEEEecCCCCc--c-ccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCC
Q 044359 189 FRMGGAAILLSNRQQDK--H-IAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGP 265 (401)
Q Consensus 189 fGDGAaA~ll~~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 265 (401)
+||||+|+||++.+... . +...++.+ .....|+.. +..+ + .+. ....+.++..+++
T Consensus 250 ~geGAaavvL~~~~~A~~~g~~i~a~I~g---~~~~~dg~~---~~~p-~----------~~~-~~~~~ai~~al~~--- 308 (430)
T 1ox0_A 250 MGEGSGMLVLESLEHAEKRGATILAEVVG---YGNTCDAYH---MTSP-H----------PEG-QGAIKAIKLALEE--- 308 (430)
T ss_dssp BCCEEEEEEEEEHHHHHHTTCCCCEEEEE---EEEEECCSC---SSSC-C----------TTC-HHHHHHHHHHHHH---
T ss_pred ccceEEEEEECcHHHHHhCCCceEEEEEE---EEEecCCCC---CCCC-C----------CCh-HHHHHHHHHHHHH---
Confidence 99999999998754211 0 01122322 222223211 1111 0 000 0111122221111
Q ss_pred CCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHH-----HHHHcCCCchhhhhhHHHHhhhcCcccch
Q 044359 266 HVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDA-----VEENLKLSKEDGEASRMTLYRFGNTSSSS 340 (401)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~-----~~~~lgi~~e~~~~s~~~~~~~Gn~~sas 340 (401)
+++. ++|||+|.+|+.+....+. +.+.+|- ++.. -.+-..+||+.+|+
T Consensus 309 --------------------Agl~---~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~---~~~v-~s~k~~~GH~~gAa 361 (430)
T 1ox0_A 309 --------------------AEIS---PEQVAYVNAHGTSTPANEKGESGAIVAVLGK---EVPV-SSTKSFTGHLLGAA 361 (430)
T ss_dssp --------------------HTCC---GGGCCCEECCCCSCHHHHHHHHHHHHHHHCS---SSEE-ECTHHHHCBCGGGH
T ss_pred --------------------hCcC---HHHcCEEEEeCCcCcccCHHHHHHHHHHhCC---Ccee-cccccccccchhhH
Confidence 2565 7899999999999877653 3445552 1211 12334589999888
Q ss_pred HHHHHHHH---HHcCCCC------------------------CCCeEEEEeeccchhhcceeeee
Q 044359 341 YWYELCYL---EAKGKVK------------------------KGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 341 i~~~L~~~---~~~g~l~------------------------~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
=.+.+..+ ++.+.+. +..+++.-+||.|-+-++++|+-
T Consensus 362 G~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 426 (430)
T 1ox0_A 362 GAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKR 426 (430)
T ss_dssp HHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCccCCCceEEEEEee
Confidence 66555443 3333311 23567788999988888888874
No 56
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=99.69 E-value=2.4e-15 Score=149.60 Aligned_cols=311 Identities=12% Similarity=0.092 Sum_probs=186.0
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHc-CCCCceecCCCccCCCCCC--ChHH--HH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKS-GIGDESCIPLNLHEMQPDV--SLKR--SR 75 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~-GI~~R~~~~~~~~~~~~~~--~l~~--~~ 75 (401)
+++|.|+|+|+..|.. .+.+++.+.+..- ....... .+ ++.. +...|....- ..+.++. +-+. ..
T Consensus 5 m~~v~ItG~g~~~p~g---~~~~~~w~~l~~g-~~~i~~~---~~-~~~~~~~~~~~~~~v--~~fd~~~~i~~~~~~~~ 74 (412)
T 4ewg_A 5 MKRVVITGMGGVTALG---SRWDEIEAALKAG-RNAVRRM---PD-WDYFESLHTRLAAPL--PGFAQPADWPRKKTRSM 74 (412)
T ss_dssp CCCEEEEEEEEEBTTB---SSHHHHHHHHHHT-CCCCEEC---GG-GGGSSSCCCCEEBCC--SCCCCCTTSCHHHHTTC
T ss_pred CCEEEEEeeEEECCCc---CCHHHHHHHHHcC-CCceeeC---Cc-cccccCCccceeeec--CCCChhhhCCHHHHhhC
Confidence 3579999999999998 7899998876431 1110000 00 1111 3333321110 0011110 0000 11
Q ss_pred HHHHHHHHHHHHHHHHhCCC-CcCCcC----EEEEeeec-C--------------------------CCCCcHHHHHHHH
Q 044359 76 EETEEVLCTIVKDLLSKHKI-NPKSID----ILVTNCSI-F--------------------------CPTPSISSMIINK 123 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~-~~~dId----~li~~s~~-~--------------------------~~~p~~a~~l~~~ 123 (401)
....+|+.+|+++||+++|+ ++++|| .++++++. + ...+..+.+|+..
T Consensus 75 d~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 154 (412)
T 4ewg_A 75 GRVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLF 154 (412)
T ss_dssp CHHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHH
Confidence 23578999999999999999 788888 78777532 1 1234578899999
Q ss_pred cCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCCC----------------------CCCCcc
Q 044359 124 FGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGY----------------------TGSTKS 181 (401)
Q Consensus 124 LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~~----------------------~~~d~~ 181 (401)
||++ .++++|+ .+|+|++.||..|.++|++|.++.|||+++|.++.... ++.++
T Consensus 155 lgl~--gp~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~- 230 (412)
T 4ewg_A 155 WDLK--GRIVPTS-SACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKR- 230 (412)
T ss_dssp TTCC--SCEEECC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTC-
T ss_pred hCCC--CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHhhccccCCCCCCCCCCCCCCCC-
Confidence 9996 4899999 59999999999999999999999999999998653210 00111
Q ss_pred hhhhhhcccccceEEEEecCCCCc--c-ccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHH
Q 044359 182 MLISNTVFRMGGAAILLSNRQQDK--H-IAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRI 258 (401)
Q Consensus 182 ~~i~~~lfGDGAaA~ll~~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 258 (401)
..+++||||+|+||++.+... . ...-++.+ .....|+.. +.. ++ .....+.++.
T Consensus 231 ---~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g---~~~~~dg~~---~~~-------------p~-~~~~~~ai~~ 287 (412)
T 4ewg_A 231 ---DGLVVGEGAATLVLEEYEHAKARGATIHAEIVG---FGCNSDGAH---MTQ-------------PT-ASTMARAMQL 287 (412)
T ss_dssp ---CCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEE---EEEEECSSC---SSS-------------CC-HHHHHHHHHH
T ss_pred ---CCCceECeEEEEEEccHHHHhhCCCcEEEEEEE---EEEcCCCCC---CCC-------------CC-HHHHHHHHHH
Confidence 357899999999999754211 0 01112222 222222210 000 00 1111112222
Q ss_pred HHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHHH-----HHHcCCCchhhhhhHHHHhhh
Q 044359 259 NISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAV-----EENLKLSKEDGEASRMTLYRF 333 (401)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~~-----~~~lgi~~e~~~~s~~~~~~~ 333 (401)
.+++ +++. ++|||++..|..+....+.+ .+.++-. -.+ ..+-..+
T Consensus 288 Al~~-----------------------Agl~---~~dId~ve~Hgtgt~~~D~~E~~al~~~~~~~-~~v---~s~K~~~ 337 (412)
T 4ewg_A 288 ALED-----------------------AKLD---ANAIAYVNAHGTSTDRGDVAESQATARTFGER-MPI---SSLKSYV 337 (412)
T ss_dssp HHHH-----------------------TTCC---GGGEEEEECCCCCCHHHHHHHHHHHHHHHCTT-CEE---ECTHHHH
T ss_pred HHHH-----------------------cCCC---HHHCCEEEccCCCCccccHHHHHHHHHHcCCC-Cee---eCccccc
Confidence 2111 3566 79999999999887766533 3445421 112 1244557
Q ss_pred cCcccchHHHHHHH---HHHcCCC-------------------------CCCCeEEEEeeccchhhcceeeee
Q 044359 334 GNTSSSSYWYELCY---LEAKGKV-------------------------KKGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 334 Gn~~sasi~~~L~~---~~~~g~l-------------------------~~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
||+.+|+=.+.+.. .++++.+ .+.++++.-+||.|-+-++++++.
T Consensus 338 GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~~ 410 (412)
T 4ewg_A 338 GHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIFRR 410 (412)
T ss_dssp CBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEECCSSCEECCCSEEEEEEEEGGGEEEEEEEEC
T ss_pred cccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccccccccCcccCCCCCEEEEeeecCCcceEEEEEee
Confidence 99998874443332 2333221 123567888999998888888864
No 57
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=99.69 E-value=6.3e-16 Score=155.41 Aligned_cols=318 Identities=13% Similarity=0.076 Sum_probs=187.1
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCcee--cCC----CccCCCCCC--ChH-
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESC--IPL----NLHEMQPDV--SLK- 72 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~--~~~----~~~~~~~~~--~l~- 72 (401)
++|.|+|+|+..|.. .+.+++.+.+.. +........ + +...++..+.- ... +...+.++. +-+
T Consensus 24 ~~v~ItG~g~~~P~g---~~~~~~w~~l~~-g~s~i~~~~---~-~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~~~ 95 (451)
T 4ddo_A 24 LRVVVTGIGIVSPLG---CGKELVWQRLIG-GGSGLRRLG---D-DIAGELSAKVGGTVQDVAEDPEGGFDPERSVPHKE 95 (451)
T ss_dssp CCEEEEEEEEEETTE---ESHHHHHHHHHT-TCCCEEECC---H-HHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCHHH
T ss_pred CCEEEEEeEEECCCC---CCHHHHHHHHHc-CCCeeeeCC---c-cccccccCccceEccccccccccccchhhhCCHHH
Confidence 469999999999998 799999987653 211111110 1 12223333321 110 000000100 000
Q ss_pred -HHHHHHHHHHHHHHHHHHHhCCCCcCCc-C----EEEEeeec---------------------------CCCCCcHHHH
Q 044359 73 -RSREETEEVLCTIVKDLLSKHKINPKSI-D----ILVTNCSI---------------------------FCPTPSISSM 119 (401)
Q Consensus 73 -~~~~~~~~la~~Aa~~aL~~ag~~~~dI-d----~li~~s~~---------------------------~~~~p~~a~~ 119 (401)
...+....|+.+|+++||+++|+++++| | .|+++++. ....+..+.+
T Consensus 96 ~~~~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 175 (451)
T 4ddo_A 96 LRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQ 175 (451)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHH
T ss_pred HhhCCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHH
Confidence 0112357899999999999999999999 7 57766531 1234457889
Q ss_pred HHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCC------------------------C
Q 044359 120 IINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNG------------------------Y 175 (401)
Q Consensus 120 l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------------~ 175 (401)
|+..||+. .++++++ .+|+|++.||..|.++|++|.++.|||+++|.++... .
T Consensus 176 ia~~lgl~--Gp~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~p 252 (451)
T 4ddo_A 176 ISIKHRFR--GPLGCPV-TACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRP 252 (451)
T ss_dssp HHHHHTCC--SCEECCC-CGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSCCT
T ss_pred HHHHhcCC--Cceeeec-CccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccccc
Confidence 99999996 4899999 5999999999999999999999999999999864210 0
Q ss_pred CCCCcchhhhhhcccccceEEEEecCCCCc--c-ccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHH
Q 044359 176 TGSTKSMLISNTVFRMGGAAILLSNRQQDK--H-IAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVA 252 (401)
Q Consensus 176 ~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 252 (401)
++.++ ..+++||||+|+||++.+... . +...++.+ .....|+.. +..+. .+. ...
T Consensus 253 fd~~~----~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g---~~~~~d~~~---~~~~~-----------~~~-~~~ 310 (451)
T 4ddo_A 253 FDRDR----DGFVMGEGAAMVVVESLDHALARGARPIAEIIG---YGTTADAYH---MTAGP-----------DDG-SGA 310 (451)
T ss_dssp TBTTC----CSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEE---EEEEECCSC---SSCCC-----------TTC-HHH
T ss_pred cccCC----CCcEEeceEEEEEEeeHHHHHhCCCceEEEEEE---EEEecCCCc---cCCCC-----------CCH-HHH
Confidence 11122 357899999999999754211 0 11123332 212222211 00000 000 011
Q ss_pred HHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHH-----HHHHcCCCchhhhhhH
Q 044359 253 ARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDA-----VEENLKLSKEDGEASR 327 (401)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~-----~~~~lgi~~e~~~~s~ 327 (401)
.+.++..+++ +++. ++|||+|.+|..+..+.+. +.+.++. ..++.. .
T Consensus 311 ~~ai~~al~~-----------------------Agl~---~~dId~ve~Hgtgt~~~d~~E~~al~~~~~~-~~~~~v-~ 362 (451)
T 4ddo_A 311 MRAMKLALRM-----------------------GDVA---PEQVDYVNAHATSTPVGDAGEIEALKTVFGV-GAGPAI-S 362 (451)
T ss_dssp HHHHHHHHHH-----------------------HTCC---GGGCCEEECCCCSCHHHHHHHHHHHHHHHCS-SSSCEE-E
T ss_pred HHHHHHHHHH-----------------------cCCC---HHHcCEEEecCCcCcccCHHHHHHHHHHhCC-CCCCcc-c
Confidence 1122221111 3565 7999999999887665543 3344554 122211 1
Q ss_pred HHHhhhcCcccchHHHHHHH---HHHcCCCC-------------------------CCCeEEEEeeccchhhcceeeeee
Q 044359 328 MTLYRFGNTSSSSYWYELCY---LEAKGKVK-------------------------KGDRVWQIAFGSGFKVNSAVWKCV 379 (401)
Q Consensus 328 ~~~~~~Gn~~sasi~~~L~~---~~~~g~l~-------------------------~Gd~vll~~~G~G~s~~~~~l~~~ 379 (401)
.+-..+||+.+|+=...+.. .++++.+. +..+++.-+||.|-+-++++|+--
T Consensus 363 s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~ 442 (451)
T 4ddo_A 363 STKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFRRY 442 (451)
T ss_dssp CTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSEECCSSCEECCCSEEEEEEEETTTEEEEEEEEES
T ss_pred CchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcccccccccCCCCCCCCcCEEEEeeEcCCCceEEEEEeeC
Confidence 34456799988875444433 33333211 234567788999988888888854
Q ss_pred c
Q 044359 380 S 380 (401)
Q Consensus 380 ~ 380 (401)
.
T Consensus 443 ~ 443 (451)
T 4ddo_A 443 P 443 (451)
T ss_dssp C
T ss_pred C
Confidence 3
No 58
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=99.69 E-value=1e-15 Score=151.23 Aligned_cols=94 Identities=13% Similarity=0.192 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|+++++||.+++++. +....+..+.+++..||+++..+++.++ .+|++++.||..|.+.|++
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~-~aCaSgl~Al~~A~~~I~~ 105 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMN-QLCGSGLRAVALGMQQIAT 105 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEEEEEE-CGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCceEEEec-ccchHHHHHHHHHHHHHHC
Confidence 4689999999999999999999999998874 4444678899999999998548999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..+.||++++|.+|.
T Consensus 106 G~~d~vlvgG~e~~s~ 121 (392)
T 2vu1_A 106 GDASIIVAGGMESMSM 121 (392)
T ss_dssp TSCSCEEEEEEEESTT
T ss_pred CCCCEEEEEEEeccCC
Confidence 9999999999998764
No 59
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.68 E-value=8.9e-15 Score=146.26 Aligned_cols=316 Identities=11% Similarity=0.047 Sum_probs=184.0
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCcee--cCCCccCCCCCCChHH--HHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESC--IPLNLHEMQPDVSLKR--SREE 77 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~--~~~~~~~~~~~~~l~~--~~~~ 77 (401)
++|.|+|+|+..|.. .+.+++.+.+.. +...-..+. ++-.+..++..|.- ..++...+ -+-++ ....
T Consensus 28 ~~vaI~G~g~~~p~g---~~~~~~w~~l~~-g~~~i~~~~--~~~~~~~~~~~~~~~~v~~d~~~~---~~~~~~~~~d~ 98 (434)
T 2gp6_A 28 PYVVVTGIAMTTALA---TDAETTWKLLLD-RQSGIRTLD--DPFVEEFDLPVRIGGHLLEEFDHQ---LTRIELRRMGY 98 (434)
T ss_dssp CCEEEEEEEEECSSC---SSHHHHHHHHHT-TCCCEEECC--CHHHHHHCCSCCEEECCSCCSTTS---SCHHHHHTCCH
T ss_pred CCEEEEeeEEeCCCC---CCHHHHHHHHHc-CCCeeeeCC--ccccccccCccceeEEcCCchhhh---CCHHHHHhCCH
Confidence 479999999999998 699999887643 211111100 00001234444431 11110000 01010 1123
Q ss_pred HHHHHHHHHHHHHHhCCCC---cCCcCEEEEee-ecCC-----------------CC--------C-cHHHHHHHHcCCC
Q 044359 78 TEEVLCTIVKDLLSKHKIN---PKSIDILVTNC-SIFC-----------------PT--------P-SISSMIINKFGFR 127 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~---~~dId~li~~s-~~~~-----------------~~--------p-~~a~~l~~~LGl~ 127 (401)
..+|+.+|+++||+++|++ +++|+ |++++ .+++ .. + ..+.+|+..||+.
T Consensus 99 ~~~l~l~aa~~ALedAG~~~~~~~~ig-v~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~ 177 (434)
T 2gp6_A 99 LQRMSTVLSRRLWENAGSPEVDTNRLM-VSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAK 177 (434)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCTTSEE-EEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHhcCCCccCCCceE-EEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCC
Confidence 5689999999999999984 55665 45554 3332 11 2 4688999999996
Q ss_pred CCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccC------------CCC-----CC-CC--cchhhhhh
Q 044359 128 SNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISS------------NGY-----TG-ST--KSMLISNT 187 (401)
Q Consensus 128 ~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~------------~~~-----~~-~d--~~~~i~~~ 187 (401)
.++++++ .+|+|++.||..|.++|++|..+.|||+++|.++. .+. +. .- .+..-..+
T Consensus 178 --Gp~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~~g~ 254 (434)
T 2gp6_A 178 --AGVMTPV-SACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGF 254 (434)
T ss_dssp --SCEECEE-CGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBTTCCCC
T ss_pred --CCeEEeC-CCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccccCCCc
Confidence 5899999 59999999999999999999999999999998654 222 10 00 00001357
Q ss_pred cccccceEEEEecCCCCcc---ccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhC
Q 044359 188 VFRMGGAAILLSNRQQDKH---IAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLG 264 (401)
Q Consensus 188 lfGDGAaA~ll~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~ 264 (401)
++||||+|+||++.+.... +...++.+ +....|+.. +..+ +. +. ....+.++..+++
T Consensus 255 v~gdGAaavvL~~~~~A~~~g~~i~a~I~g---~~~~~Dg~~---~~~p-~~----------~~-~~~~~ai~~al~~-- 314 (434)
T 2gp6_A 255 VFGEGGALLLIETEEHAKARGANILARIMG---ASITSDGFH---MVAP-DP----------NG-ERAGHAITRAIQL-- 314 (434)
T ss_dssp CBBCCEEEEEEEEHHHHHTTTCCCCEEEEE---EEEEECCSC---SSSC-CT----------TC-HHHHHHHHHHHHH--
T ss_pred ceecceEEEEeCcHHHHHHCCCceEEEEEE---EEEecCCCC---CCCC-CC----------Ch-HHHHHHHHHHHHH--
Confidence 8999999999987542110 01122322 222233321 1111 00 00 0111122221111
Q ss_pred CCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHH-----HHHHcCCCchhhhhhHHHHhhhcCcccc
Q 044359 265 PHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDA-----VEENLKLSKEDGEASRMTLYRFGNTSSS 339 (401)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~-----~~~~lgi~~e~~~~s~~~~~~~Gn~~sa 339 (401)
+++. ++|||+|.+|..+..+.+. +.+.++-. ++.. ......+||+.+|
T Consensus 315 ---------------------Agl~---~~dId~ve~Hgtgt~~~D~~E~~al~~~fg~~--~~~v-~s~k~~~GH~~gA 367 (434)
T 2gp6_A 315 ---------------------AGLA---PGDIDHVNAHATGTQVGDLAEGRAINNALGGN--RPAV-YAPKSALGHSVGA 367 (434)
T ss_dssp ---------------------TTCC---TTTEEEEECCCCSCHHHHHHHHHHHHHHHTTC--CCEE-CCTHHHHCBCTTT
T ss_pred ---------------------cCCC---HHHcCEEEEeCCcCccchHHHHHHHHHHhccC--CCCc-ccchhhhcCchhh
Confidence 3565 7899999999877666443 33444421 3321 2456779999988
Q ss_pred hHHHHHHH---HHHcCCCC------------------------CCCeEEEEeeccchhhcceeee
Q 044359 340 SYWYELCY---LEAKGKVK------------------------KGDRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 340 si~~~L~~---~~~~g~l~------------------------~Gd~vll~~~G~G~s~~~~~l~ 377 (401)
+=.+.+.. .++.+.+. +-.+++.-+||.|-+-.+++|+
T Consensus 368 aG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~ 432 (434)
T 2gp6_A 368 VGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVAIAFG 432 (434)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCEECCSSCCCSCCCEEEEEEEETTTEEEEEEEE
T ss_pred hHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccCCCccCCCCCEEEEeCCcCCCeeEEEEEE
Confidence 76555543 34445432 1245677789988887777776
No 60
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=99.68 E-value=1.3e-15 Score=150.70 Aligned_cols=94 Identities=14% Similarity=0.248 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
+.+|+.+|+++||+++|+++++||.++++++ ++...+..+.+++..||++...++++++ .+|+|++.||..|.++|++
T Consensus 30 ~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~-~aCaSg~~Ai~~A~~~I~~ 108 (397)
T 1wl4_A 30 VQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVPAWSCQ-MICGSGLKAVCLAVQSIGI 108 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEEC-CGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCccEEEec-CcChhHHHHHHHHHHHHHC
Confidence 4689999999999999999999999998874 4444678999999999996568999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..+.||++++|.+|.
T Consensus 109 G~~d~vlagG~e~~s~ 124 (397)
T 1wl4_A 109 GDSSIVVAGGMENMSK 124 (397)
T ss_dssp TSCSEEEEEEEEESTT
T ss_pred CCCCEEEEEEEeecCC
Confidence 9999999999998874
No 61
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.68 E-value=2.1e-15 Score=149.36 Aligned_cols=94 Identities=11% Similarity=0.266 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCC-CCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCP-TPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~-~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
+.+|+.+|+++||+++|+++++||.|+++++ +++. .|..+.+++..||++.+.++++++ .+|+|++.||..|.++|+
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~-~aCas~~~Al~~A~~~I~ 104 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVN-RLCGSGLEAVAQAARAIW 104 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEE-CGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCccEeecc-ccchHHHHHHHHHHHHHH
Confidence 5699999999999999999999999998874 4444 578999999999996568999999 599999999999999999
Q ss_pred cCCCCeEEEEeeccccC
Q 044359 156 VHKNSLALVLSMEAISS 172 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~ 172 (401)
+|..+.||++++|.+|.
T Consensus 105 ~G~~d~vLv~G~e~~s~ 121 (401)
T 1ulq_A 105 AGEGKVYIGSGVESMSR 121 (401)
T ss_dssp TTSCSEEEEEEEEESSS
T ss_pred CCCCCEEEEEEEeecCC
Confidence 99999999999998765
No 62
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.66 E-value=1.8e-14 Score=143.27 Aligned_cols=310 Identities=12% Similarity=0.071 Sum_probs=184.0
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceec-CCCcc---CCCCCCChHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCI-PLNLH---EMQPDVSLKRSREE 77 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~~---~~~~~~~l~~~~~~ 77 (401)
..|.|+|+|+..|.. .+.+++.+.+.. +...-..+. + ++..+...+.-. .++.. .+++.. ......
T Consensus 9 ~~v~I~G~g~~~p~g---~~~~~~w~~l~~-g~~~i~~~~---~-~~~~~~~~~~~~~v~~fd~~~~~~~~~--~~~~d~ 78 (415)
T 1tqy_B 9 KSVLITGVGVVAPNG---LGLAPYWSAVLD-GRHGLGPVT---R-FDVSRYPATLAGQIDDFHAPDHIPGRL--LPQTDP 78 (415)
T ss_dssp -CEEEEEEEEEETTE---ESHHHHHHHHHT-TCCCEEECT---T-TTGGGSSCCEEECCCSCCHHHHSCTTT--GGGCCH
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHc-CCCcEEECC---c-ccccCCCcceEEEeCCCCchhcCCHHH--HHhcCH
Confidence 468999999999998 688999887642 111100000 0 000111111110 00000 011110 011123
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcC----EEEEeee-cCC--------------------------CCCcHHHHHHHHcCC
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSID----ILVTNCS-IFC--------------------------PTPSISSMIINKFGF 126 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~-~~~--------------------------~~p~~a~~l~~~LGl 126 (401)
...|+.+|+++||+++|+++++|| .|+++++ .++ ..+..+.+|+..||+
T Consensus 79 ~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 158 (415)
T 1tqy_B 79 STRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGM 158 (415)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCC
Confidence 568999999999999999999999 7887764 221 245678999999999
Q ss_pred CCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccc-cCC----------CC-----------CCCCcchhh
Q 044359 127 RSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAI-SSN----------GY-----------TGSTKSMLI 184 (401)
Q Consensus 127 ~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~-s~~----------~~-----------~~~d~~~~i 184 (401)
+ .++++++ .+|+|++.||..|.++|++| .+.|||+++|.+ +.. +. ++.++
T Consensus 159 ~--gp~~~v~-~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~pfd~~~---- 230 (415)
T 1tqy_B 159 R--GPSSALV-AEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDERA---- 230 (415)
T ss_dssp C--SSCEEEE-CGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCCCSCGGGSCCTTSTTC----
T ss_pred C--CceEeec-CCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccCCCCCCCCcCCCCCCC----
Confidence 6 4899999 59999999999999999999 999999999982 210 00 11112
Q ss_pred hhhcccccceEEEEecCCCCcc--c-cc-eEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHH
Q 044359 185 SNTVFRMGGAAILLSNRQQDKH--I-AK-YKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINI 260 (401)
Q Consensus 185 ~~~lfGDGAaA~ll~~~~~~~~--~-~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~ 260 (401)
..+++||||+|+||++.+.... . .. .++.+ .....|+.. +..+ + + ...+.++..+
T Consensus 231 ~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g---~~~~~dg~~---~~~p-------------~-~-~~~~ai~~al 289 (415)
T 1tqy_B 231 AGYVPGEGGAILVLEDSAAAEARGRHDAYGELAG---CASTFDPAP---GSGR-------------P-A-GLERAIRLAL 289 (415)
T ss_dssp CCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEE---EEEEECCCT---TCCC-------------C-C-SHHHHHHHHH
T ss_pred CCcceeeeEEEEEECcHHHHHHCCCCceEEEEEE---EEEccCCCC---CCCC-------------C-H-HHHHHHHHHH
Confidence 3689999999999997543110 0 11 22332 222223211 1111 0 0 0111222221
Q ss_pred HhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHH-----HHHHcCCCchhhhhhHHHHhhhcC
Q 044359 261 SQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDA-----VEENLKLSKEDGEASRMTLYRFGN 335 (401)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~-----~~~~lgi~~e~~~~s~~~~~~~Gn 335 (401)
++ +++. ++|||++.+|..+....+. +.+.++-..-.+ ..+-..+||
T Consensus 290 ~~-----------------------Agl~---~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~v---~s~K~~~GH 340 (415)
T 1tqy_B 290 ND-----------------------AGTG---PEDVDVVFADGAGVPELDAAEARAIGRVFGREGVPV---TVPKTTTGR 340 (415)
T ss_dssp HH-----------------------HTCC---GGGCCEEECCCCCSHHHHHHHHHHHHHHHCTTCSEE---ECGGGGTCB
T ss_pred HH-----------------------cCCC---HhHCCEEEEeCCCCcCcCHHHHHHHHHHhCCCCceE---eccchhhcc
Confidence 11 2565 7999999999988765543 333444221111 123345799
Q ss_pred cccchHHHHHHHH---HHcCCCC------------------------CCCeEEEEeeccchhhcceeeeee
Q 044359 336 TSSSSYWYELCYL---EAKGKVK------------------------KGDRVWQIAFGSGFKVNSAVWKCV 379 (401)
Q Consensus 336 ~~sasi~~~L~~~---~~~g~l~------------------------~Gd~vll~~~G~G~s~~~~~l~~~ 379 (401)
+.+|+=.+.+... ++.+.+. ...+++.-+||.|-+-++++|+-.
T Consensus 341 ~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfgG~n~~~vl~~~ 411 (415)
T 1tqy_B 341 LYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRRF 411 (415)
T ss_dssp CGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccCCCCEEEEecCcCCCeEEEEEEecC
Confidence 9998855555443 3333210 235678889998888888888753
No 63
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=99.64 E-value=3.1e-14 Score=140.73 Aligned_cols=94 Identities=11% Similarity=0.131 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHc
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..+|+.+|+++||+++|+++++||.+++++. ++...+..+.+++..||++.+.++++++ .+|++++.||..|.++|++
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~p~~~v~-~aCaS~~~Al~~A~~~I~~ 110 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTPCTTIN-KVCASGMKAIMMASQSLMC 110 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCCEEEEE-CGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCceEEEec-ccccHHHHHHHHHHHHHHC
Confidence 4689999999999999999999999998874 4555678899999999996568999999 5999999999999999999
Q ss_pred CCCCeEEEEeeccccC
Q 044359 157 HKNSLALVLSMEAISS 172 (401)
Q Consensus 157 g~~~~vLvv~~e~~s~ 172 (401)
|..+.|||+++|.++.
T Consensus 111 G~~d~vlvgG~e~~s~ 126 (395)
T 2ib8_A 111 GHQDVMVAGGMESMSN 126 (395)
T ss_dssp TSCSEEEEEEEEEGGG
T ss_pred CCCCEEEEEeeecccC
Confidence 9999999999998764
No 64
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=99.63 E-value=8.2e-15 Score=144.61 Aligned_cols=94 Identities=12% Similarity=0.218 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHhC-CCCcCCcCEEEEeee-cCCC-CCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKH-KINPKSIDILVTNCS-IFCP-TPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~a-g~~~~dId~li~~s~-~~~~-~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i 154 (401)
..+|+.+|+++||+++ |+++++||.++++++ +++. .+..+.+++..||++.+.++++++ .+|++++.||..|.++|
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~-~aCaS~~~Al~~A~~~I 108 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVS-RLCGSSMSALHTAAQAI 108 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEEE-CGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCCCccEEEEc-ccchhHHHHHHHHHHHH
Confidence 4699999999999999 999999999998874 3333 367899999999996678999999 59999999999999999
Q ss_pred HcCCCCeEEEEeeccccC
Q 044359 155 KVHKNSLALVLSMEAISS 172 (401)
Q Consensus 155 ~~g~~~~vLvv~~e~~s~ 172 (401)
++|..+.||++++|.+|.
T Consensus 109 ~~G~~d~vlvgG~e~~s~ 126 (390)
T 1wdk_C 109 MTGNGDVFVVGGVEHMGH 126 (390)
T ss_dssp HTTSCSEEEEEEEEETTT
T ss_pred HcCCCCEEEEeeeecccc
Confidence 999999999999998764
No 65
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=99.63 E-value=9.7e-15 Score=145.83 Aligned_cols=309 Identities=10% Similarity=0.036 Sum_probs=187.7
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccC---CCCCCChHHHHHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHE---MQPDVSLKRSREET 78 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~---~~~~~~l~~~~~~~ 78 (401)
++|.|+|+|+..|.. .+.+++.+.+..- ........ + ++..++..+.....+... +++. .....+..
T Consensus 23 ~~V~ItG~g~~~p~g---~~~~~~w~~l~~g-~~~i~~~~---~-~~~~~~~~~~~g~~~fd~~~~i~~~--~~~~~d~~ 92 (428)
T 3mqd_A 23 RRVVVTGMGIVSSIG---SNTEEVTASLREA-KSGISRAE---E-YAELGFRCQVHGAPDIDIESLVDRR--AMRFHGRG 92 (428)
T ss_dssp CCEEEEEEEEEBTTB---SSHHHHHHHHHHT-CCCEEECH---H-HHHTTCSCCEEECCCCCHHHHSCTG--GGTTCCHH
T ss_pred CCEEEEeeEEECCCc---CCHHHHHHHHHcC-CCcceeCC---c-ccccCCCcccccccCCChhhcCCHH--HHhhCCHH
Confidence 579999999999998 7999999876532 11111111 1 233455555322111100 1110 00011246
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcC----EEEEeee-cCC--------------------------CCCcHHHHHHHHcCCC
Q 044359 79 EEVLCTIVKDLLSKHKINPKSID----ILVTNCS-IFC--------------------------PTPSISSMIINKFGFR 127 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId----~li~~s~-~~~--------------------------~~p~~a~~l~~~LGl~ 127 (401)
.+|+.+|+++||+++|+++++|| .++++++ .++ ..+..+.+|+..||+.
T Consensus 93 ~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 172 (428)
T 3mqd_A 93 TAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIK 172 (428)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCC
Confidence 78999999999999999999998 6777754 221 1345788999999996
Q ss_pred CCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCCC-----------------------CCCCcchhh
Q 044359 128 SNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGY-----------------------TGSTKSMLI 184 (401)
Q Consensus 128 ~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~~-----------------------~~~d~~~~i 184 (401)
.+++.|+ .+|+|++.||..|.++|++|.++.|||+++|.++.... ++.++
T Consensus 173 --gp~~tv~-~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~---- 245 (428)
T 3mqd_A 173 --GINYSIS-SACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNR---- 245 (428)
T ss_dssp --SCEECCC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTC----
T ss_pred --Cceeeec-CccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHHHHHhhhhcccccCCcccccCcccCCC----
Confidence 5999999 59999999999999999999999999999998653210 11122
Q ss_pred hhhcccccceEEEEecCCCCcc---ccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHH
Q 044359 185 SNTVFRMGGAAILLSNRQQDKH---IAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINIS 261 (401)
Q Consensus 185 ~~~lfGDGAaA~ll~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~ 261 (401)
..+++||||+|+||++.+.... ....++++ .....|+.. +..| +. ....+
T Consensus 246 ~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g---~~~~~dg~~---~~~P-------------~~-~~~~~------- 298 (428)
T 3mqd_A 246 DGFVIAGGAGVLVLEDLETALARGAKIYGEIVG---YGATSDGYD---MVAP-------------SG-EGAIR------- 298 (428)
T ss_dssp CSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEE---EEEEECCSC---SSSC-------------CS-HHHHH-------
T ss_pred CCcccccceEEEEEccHHHHHhCCCcEEEEEEE---EEEcCCCCC---CCCC-------------CH-HHHHH-------
Confidence 3578999999999997543210 11122222 222222211 1111 00 00011
Q ss_pred hhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHH-----HHHHcCCCchhhhhhHHHHhhhcCc
Q 044359 262 QLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDA-----VEENLKLSKEDGEASRMTLYRFGNT 336 (401)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~-----~~~~lgi~~e~~~~s~~~~~~~Gn~ 336 (401)
.+.++++++ . +|||+|-.|-.+-.+.+. +.+.++...+++.. ...-..+||+
T Consensus 299 ------------------ai~~Al~gl---~-~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~v-~s~K~~~GH~ 355 (428)
T 3mqd_A 299 ------------------CMKMALSTV---T-SKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPI-AATKSLTGHS 355 (428)
T ss_dssp ------------------HHHHHHTTC---C-SCCCEEECCCCSCHHHHHHHHHHHHHHHCSGGGSCCB-CCTHHHHCBC
T ss_pred ------------------HHHHHHhCC---c-cccCEEEEeCCCCCCcCHHHHHHHHHHhcccCCCcee-ecchhhhccc
Confidence 112222322 3 799999999888776654 34556643222211 1344557999
Q ss_pred ccchHHHHHH---HHHHcCCCC-------------------------CCCeEEEEeeccchhhcceeee
Q 044359 337 SSSSYWYELC---YLEAKGKVK-------------------------KGDRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 337 ~sasi~~~L~---~~~~~g~l~-------------------------~Gd~vll~~~G~G~s~~~~~l~ 377 (401)
.+|+=.+.|. ..++++.+. +-.+++.-+||-|-+-++++|+
T Consensus 356 ~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~vl~ 424 (428)
T 3mqd_A 356 LGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQ 424 (428)
T ss_dssp GGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCBCSSCEESCCCCEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCccCCccccCCCCEEEEecCcCCcceEEEEEe
Confidence 8887654443 334433221 1245677889988887788876
No 66
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=99.62 E-value=8.7e-15 Score=146.57 Aligned_cols=316 Identities=12% Similarity=0.028 Sum_probs=186.0
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceec-CCCc---cCCCCC--CChH--H
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCI-PLNL---HEMQPD--VSLK--R 73 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~-~~~~---~~~~~~--~~l~--~ 73 (401)
++|.|+|+|+..|.. .+.+++.+.+.. +...-..+ .+ ++..+...+... .++. ..+.++ .+-+ .
T Consensus 21 ~~v~ItG~g~~~p~g---~~~~~~w~~l~~-g~~~i~~~---~~-~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~ 92 (438)
T 2iwz_A 21 RRVVITGIGLVTPLG---VGTHLVWDRLIG-GESGIVSL---VG-EEYKSIPCSVAAYVPRGSDEGQFNEQNFVSKSDIK 92 (438)
T ss_dssp CCEEEEEEEEEETTE---ESHHHHHHHHHT-TCCCEEEC---CS-GGGTTSSCCEEECCCBSSSTTSBCGGGTSCHHHHT
T ss_pred CCEEEEeeeEECCCC---CCHHHHHHHHHc-CCCccccC---Cc-hhcccCccceeeeeccccccccCChhhcCCHHHHH
Confidence 368999999999987 789999887642 11110000 00 011122222110 0000 000000 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCc-CCcC----EEEEeee-cCC-------------------------CCC-cHHHHHH
Q 044359 74 SREETEEVLCTIVKDLLSKHKINP-KSID----ILVTNCS-IFC-------------------------PTP-SISSMII 121 (401)
Q Consensus 74 ~~~~~~~la~~Aa~~aL~~ag~~~-~dId----~li~~s~-~~~-------------------------~~p-~~a~~l~ 121 (401)
......+|+.+|+++||+++|+++ ++|| .|+++++ .++ ..+ ..+.+|+
T Consensus 93 ~~d~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia 172 (438)
T 2iwz_A 93 SMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVS 172 (438)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHH
Confidence 112356899999999999999998 8887 5776653 221 122 4788999
Q ss_pred HHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccc-cCC----------CC-----------CCCC
Q 044359 122 NKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAI-SSN----------GY-----------TGST 179 (401)
Q Consensus 122 ~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~-s~~----------~~-----------~~~d 179 (401)
..||+. .++++++ .+|+|++.||..|.++|++|..+.|||+++|.+ +.. +. ++.+
T Consensus 173 ~~lgl~--gp~~~v~-taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pfd~~ 249 (438)
T 2iwz_A 173 IRYKLK--GPNHAVS-TACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRPFHPK 249 (438)
T ss_dssp HHHTCC--SCEECBC-CGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTSCCTTCTT
T ss_pred HHhCCC--Cceeeec-CchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCcccccCCCC
Confidence 999996 3899999 599999999999999999999999999999973 211 00 0112
Q ss_pred cchhhhhhcccccceEEEEecCCCCc--cccc-eEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHH
Q 044359 180 KSMLISNTVFRMGGAAILLSNRQQDK--HIAK-YKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARAL 256 (401)
Q Consensus 180 ~~~~i~~~lfGDGAaA~ll~~~~~~~--~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~ 256 (401)
+ ..+++||||+|+||++.+... .... -++.+ +....|+.. +..+ +. +. ....+.+
T Consensus 250 ~----~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g---~~~~~d~~~---~t~p-~~----------~~-~~~~~ai 307 (438)
T 2iwz_A 250 R----DGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLG---YGLSGDAGH---ITAP-DP----------EG-EGALRCM 307 (438)
T ss_dssp C----CSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEE---EEEEECCSC---SSSC-CT----------TC-HHHHHHH
T ss_pred C----CCEEeeceEEEEEeccHHHHHhCCCceEEEEec---ceecCCCCC---CCCC-CC----------CH-HHHHHHH
Confidence 2 358999999999998754311 0011 12222 222223221 1111 00 00 0111122
Q ss_pred HHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHH-----HHHHHcCCCchhhhhhHHHHh
Q 044359 257 RINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIID-----AVEENLKLSKEDGEASRMTLY 331 (401)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~-----~~~~~lgi~~e~~~~s~~~~~ 331 (401)
+..+++ +++. ++|||++.+|+.+..+.+ .+.+.++...+++..+ .+-.
T Consensus 308 ~~Al~~-----------------------Agl~---p~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~-s~K~ 360 (438)
T 2iwz_A 308 AAALKD-----------------------AGVQ---PEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVS-STKG 360 (438)
T ss_dssp HHHHHH-----------------------HTCC---GGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEE-CCHH
T ss_pred HHHHHH-----------------------cCCC---HHHcCEEEecCCCCcccCHHHHHHHHHHHhccCCCccee-cchh
Confidence 221111 3565 799999999999977643 4455566544454321 3456
Q ss_pred hhcCcccchHHHHHHHH---HHcCCCC------------------------C---CCeEEEEeeccchhhcceeee
Q 044359 332 RFGNTSSSSYWYELCYL---EAKGKVK------------------------K---GDRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 332 ~~Gn~~sasi~~~L~~~---~~~g~l~------------------------~---Gd~vll~~~G~G~s~~~~~l~ 377 (401)
.+||+.+|+=.+.|..+ ++.+.+. + -.+.+.-+||.|-+-+.++|+
T Consensus 361 ~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~ 436 (438)
T 2iwz_A 361 ATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIA 436 (438)
T ss_dssp HHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBCCBSSCEECCCSSSCEEEEEEEETTTEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccCCCcccCCCCCccEEEEecCcCCCeeEEEEEe
Confidence 78999998877666543 3344321 1 234566789988887777776
No 67
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.62 E-value=5.5e-14 Score=139.44 Aligned_cols=308 Identities=11% Similarity=0.091 Sum_probs=186.4
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCC--CChHH--HHH
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPD--VSLKR--SRE 76 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~--~~l~~--~~~ 76 (401)
+++|.|+|+|+..|.. .+.+++.+.+.. +...-..+. + ++..++..|....-+. .++ -+-+. ...
T Consensus 1 m~~v~ItG~g~~~p~g---~~~~~~w~~l~~-g~~~i~~~~---~-~~~~~~~~~~~~~v~f---d~~~~~~~~~~~~~d 69 (406)
T 2vba_A 1 MKRAVITGLGIVSSIG---NNQQEVLASLRE-GRSGITFSQ---E-LKDSGMRSHVWGNVKL---DTTGLIDRKVVRFMS 69 (406)
T ss_dssp CCCEEEEEEEEEBTTB---SSHHHHHHHHHH-TCCCEEECH---H-HHHTTCSCCEEECCCC---CCTTSSCHHHHTTCC
T ss_pred CCCEEEEeeEEECCCC---CCHHHHHHHHHc-CCCeEEeCC---c-ccccCCccceEEEecC---ChhhcCCHHHHHhcC
Confidence 4679999999999998 688999887643 211111111 1 2223444443211100 011 00000 112
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCE-----EEEeee-cCC---------------------------CCCcHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDI-----LVTNCS-IFC---------------------------PTPSISSMIINK 123 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~-----li~~s~-~~~---------------------------~~p~~a~~l~~~ 123 (401)
...+|+.+|+++||+++|+++++||. |+++++ .++ .....+.+|+..
T Consensus 70 ~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (406)
T 2vba_A 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHh
Confidence 35689999999999999999988875 777764 321 123567899999
Q ss_pred cCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC----------CC-------------CCCCc
Q 044359 124 FGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN----------GY-------------TGSTK 180 (401)
Q Consensus 124 LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~----------~~-------------~~~d~ 180 (401)
||+. .+++.++ .+|+|++.||..|.++|++|..+.+||+++|.++.. +. ++.++
T Consensus 150 lgl~--Gp~~~v~-taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~~~~~~ls~~~~~~p~~~~~pfd~~~ 226 (406)
T 2vba_A 150 FKIH--GVNYSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHR 226 (406)
T ss_dssp TTCC--SCEEEEE-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTC
T ss_pred ccCC--Cceeeec-cchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHHHhhccccccccCCCCccccCcCcCCC
Confidence 9996 4899999 599999999999999999999999999999986422 10 01122
Q ss_pred chhhhhhcccccceEEEEecCCCCc--cccc-eEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHH
Q 044359 181 SMLISNTVFRMGGAAILLSNRQQDK--HIAK-YKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALR 257 (401)
Q Consensus 181 ~~~i~~~lfGDGAaA~ll~~~~~~~--~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 257 (401)
..+++||||+|+||++.+... .... -++.+ +...+|+.. +..| + .....+.++
T Consensus 227 ----~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g---~~~~~dg~~---~t~p-------------~-~~~~~~ai~ 282 (406)
T 2vba_A 227 ----DGFVIAGGGGMVVVEELEHALARGAHIYAEIVG---YGATSDGAD---MVAP-------------S-GEGAVRCMK 282 (406)
T ss_dssp ----CSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEE---EEEEECCSC---TTSC-------------C-SHHHHHHHH
T ss_pred ----CceEeeceEEEEEeCcHHHHHHCCCeEEEEEEE---EEEcCCCCC---CCCC-------------C-HHHHHHHHH
Confidence 357899999999998754311 0011 12322 222223211 1111 0 011111111
Q ss_pred HHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHH-----HHHHHcCCCchhhhhhHHHHhh
Q 044359 258 INISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIID-----AVEENLKLSKEDGEASRMTLYR 332 (401)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~-----~~~~~lgi~~e~~~~s~~~~~~ 332 (401)
++++.. -+|||++..|+.+....+ .+.+.++...-.+ -.+-..
T Consensus 283 -------------------------~al~~a----g~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~v---~s~K~~ 330 (406)
T 2vba_A 283 -------------------------MAMHGV----DTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAI---SATKAM 330 (406)
T ss_dssp -------------------------HHHTTC----CSCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEE---ECTHHH
T ss_pred -------------------------HHHhhC----CCCccEEEeeCccCcccCHHHHHHHHHHhCcCCCce---eCchhh
Confidence 111111 168999999999877644 3455566432222 134556
Q ss_pred hcCcccchHHHHHHHH---HHcCCCC------------------------CCCeEEEEeeccchhhcceeeee
Q 044359 333 FGNTSSSSYWYELCYL---EAKGKVK------------------------KGDRVWQIAFGSGFKVNSAVWKC 378 (401)
Q Consensus 333 ~Gn~~sasi~~~L~~~---~~~g~l~------------------------~Gd~vll~~~G~G~s~~~~~l~~ 378 (401)
+||+.+|+=.+.+... ++.+.+. +-.+++.-+||.|-+-..++++-
T Consensus 331 ~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 403 (406)
T 2vba_A 331 TGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRK 403 (406)
T ss_dssp HCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred hcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccccCCcccCCCCCEEEEcCCCCCCeEEEEEEEe
Confidence 8999998876665443 3344321 12456778899888888888864
No 68
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=99.61 E-value=2e-14 Score=141.87 Aligned_cols=94 Identities=14% Similarity=0.252 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHhCC----CCcCCcCEEEEeee-cCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHK----INPKSIDILVTNCS-IFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKD 152 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag----~~~~dId~li~~s~-~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~ 152 (401)
+.+|+.+|+++||+++| +++++||.|++++. +++..|..+.+++..||++.+.++++++ .+|+|++.||..|.+
T Consensus 35 ~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~-~aCasg~~Al~~A~~ 113 (393)
T 1afw_A 35 TDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALN-RQCSSGLTAVNDIAN 113 (393)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEE-CGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCCCCCceEEEEc-CcCHHHHHHHHHHHH
Confidence 57999999999999999 99999999998874 4555577899999999996568999999 599999999999999
Q ss_pred HHHcCCCCeEEEEeeccccC
Q 044359 153 LLKVHKNSLALVLSMEAISS 172 (401)
Q Consensus 153 ~i~~g~~~~vLvv~~e~~s~ 172 (401)
+|++|..+.||++++|.+|.
T Consensus 114 ~I~~G~~d~vLv~G~e~~s~ 133 (393)
T 1afw_A 114 KIKVGQIDIGLALGVESMTN 133 (393)
T ss_dssp HHHTTSCSEEEEEEEEEHHH
T ss_pred HHHCCCCCEEEEEEEEecCC
Confidence 99999999999999998653
No 69
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=99.60 E-value=1.9e-14 Score=143.87 Aligned_cols=94 Identities=17% Similarity=0.324 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee-cCC-CCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS-IFC-PTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~-~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~ 155 (401)
..+|+.+|+++||+++|+++++||.|+++++ +++ ..+..+.+++..||++...++++++ .+|+|++.||..|.++|+
T Consensus 55 ~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~-~aCaSg~~Al~~A~~~I~ 133 (442)
T 2wu9_A 55 PDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVN-RQCSSGLQAVADVAAAIK 133 (442)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTSCEEEEE-CGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCceEEEeC-CcCHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999998874 332 2356788999999996568999999 599999999999999999
Q ss_pred cCCCCeEEEEeeccccC
Q 044359 156 VHKNSLALVLSMEAISS 172 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~ 172 (401)
+|..+.||++++|.+|.
T Consensus 134 sG~~d~vLvgG~e~~s~ 150 (442)
T 2wu9_A 134 AGFYDIGIGAGLESMTT 150 (442)
T ss_dssp TTSCSEEEEEEEEETTT
T ss_pred CCCCCEEEEEEEeecCC
Confidence 99999999999998765
No 70
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.60 E-value=2.4e-14 Score=143.15 Aligned_cols=253 Identities=14% Similarity=0.063 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHHHhCCC-CcCCcC----EEEEeee-cC-----------------CCC---------CcHHHHHHHHc
Q 044359 77 ETEEVLCTIVKDLLSKHKI-NPKSID----ILVTNCS-IF-----------------CPT---------PSISSMIINKF 124 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~-~~~dId----~li~~s~-~~-----------------~~~---------p~~a~~l~~~L 124 (401)
...+|+.+|+++||+++|+ ++++|| .|+++++ ++ ... ...+.+|+..|
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 166 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence 3568999999999999999 988887 5666653 22 111 24788999999
Q ss_pred CCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------CCC--C-----CCc--chhh
Q 044359 125 GFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------GYT--G-----STK--SMLI 184 (401)
Q Consensus 125 Gl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~~--~-----~d~--~~~i 184 (401)
|+. .++++++ .+|+|++.||..|.++|++|..+.|||+++|.++.. +.. . ..+ +..-
T Consensus 167 gl~--gp~~~v~-taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~ 243 (431)
T 2ix4_A 167 GFQ--GPNHAAV-TACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDR 243 (431)
T ss_dssp TCC--SCEECBC-CGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTTC
T ss_pred CCC--CceeCcc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcccccccCCCCC
Confidence 996 4899999 599999999999999999999999999999976431 100 0 000 0001
Q ss_pred hhhcccccceEEEEecCCCCc--cccc-eEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHH
Q 044359 185 SNTVFRMGGAAILLSNRQQDK--HIAK-YKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINIS 261 (401)
Q Consensus 185 ~~~lfGDGAaA~ll~~~~~~~--~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~ 261 (401)
..+++||||+|+||++.+... .... -++.+ +...+|+.. +..+ .. +. ....+.+++.++
T Consensus 244 ~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g---~~~~~dg~~---~~~p-~~----------~~-~~~~~ai~~al~ 305 (431)
T 2ix4_A 244 DGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCG---YGMSGDAHH---ITQP-PE----------DG-KGAVLAMTRALR 305 (431)
T ss_dssp CSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEE---EEEEECCSC---SSCC-CT----------TC-HHHHHHHHHHHH
T ss_pred CCceeecceEEEEEccHHHHHhCCCceEEEEee---eeecCCCCC---CCCC-CC----------CH-HHHHHHHHHHHH
Confidence 357899999999998754311 0011 12222 222233321 1111 00 00 011111222111
Q ss_pred hhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHH-----HHHHHcCCCc--hhhhhhHHHHhhhc
Q 044359 262 QLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIID-----AVEENLKLSK--EDGEASRMTLYRFG 334 (401)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~-----~~~~~lgi~~--e~~~~s~~~~~~~G 334 (401)
+ +++. ++|||++.+|..+..+.+ .+.+.++... +++.. -.....+|
T Consensus 306 ~-----------------------agl~---~~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v-~s~k~~~G 358 (431)
T 2ix4_A 306 Q-----------------------SGLC---PNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF-SSTKGATG 358 (431)
T ss_dssp H-----------------------HTCC---GGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE-ECTHHHHC
T ss_pred H-----------------------cCCC---HHHcCEEEEeCCcCcccCHHHHHHHHHHHcccccCCCcee-ecchhhhc
Confidence 1 3565 799999999988766544 2334444211 22321 12356899
Q ss_pred CcccchHHHHHHHH---HHcCCCC-------------------------CCCeEEEEeeccchhhcceeee
Q 044359 335 NTSSSSYWYELCYL---EAKGKVK-------------------------KGDRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 335 n~~sasi~~~L~~~---~~~g~l~-------------------------~Gd~vll~~~G~G~s~~~~~l~ 377 (401)
|+.+|+=...+... ++.+.+. +..+++.-+||.|-+-++++|+
T Consensus 359 H~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~ 429 (431)
T 2ix4_A 359 HLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFA 429 (431)
T ss_dssp BCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCCccccccCCCCEEEEecccCCCeeEEEEEe
Confidence 99998866655543 3333211 2345677889988887787775
No 71
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.58 E-value=1.7e-13 Score=136.35 Aligned_cols=316 Identities=13% Similarity=0.078 Sum_probs=181.9
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCcee--cCCCccCCCCCCChHH--HHHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESC--IPLNLHEMQPDVSLKR--SREE 77 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~--~~~~~~~~~~~~~l~~--~~~~ 77 (401)
++|.|+|+|+..|.. .+.+++.+.+.. +...-..+. ++-.+..+...|.. ..++...+ -+-++ ....
T Consensus 12 ~~vaI~G~g~~~p~g---~~~~~~w~~l~~-g~~~i~~~~--~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~d~ 82 (416)
T 2wge_A 12 PSVVVTAVTATTSIS---PDIESTWKGLLA-GESGIHALE--DEFVTKWDLAVKIGGHLKDPVDSH---MGRLDMRRMSY 82 (416)
T ss_dssp CCEEEEEEEEEESSC---SSHHHHHHHHHT-TCCCCEECC--CHHHHHHTCSCCEEBCCSSCGGGG---CCHHHHHHSCH
T ss_pred CcEEEEeeEEECCCC---CCHHHHHHHHHc-CCCEEEeCC--ccccccccCCccEEEEeCCchhhh---CCHHHHHhcCH
Confidence 469999999999998 699999987653 211111000 00001224444421 11110000 01011 1123
Q ss_pred HHHHHHHHHHHHHHhCCCC---cCCcCEEEEeee-cCC-----------------CCC---------cHHHHHHHHcCCC
Q 044359 78 TEEVLCTIVKDLLSKHKIN---PKSIDILVTNCS-IFC-----------------PTP---------SISSMIINKFGFR 127 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~---~~dId~li~~s~-~~~-----------------~~p---------~~a~~l~~~LGl~ 127 (401)
..+|+.+|+++||+++|++ +++|+ |+++++ .++ ..| ..+.+|+..||+.
T Consensus 83 ~~~l~l~aa~~AL~dAG~~~~~~~~~g-v~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~ 161 (416)
T 2wge_A 83 VQRMGKLLGGQLWESAGSPEVDPDRFA-VVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGAR 161 (416)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCGGGEE-EEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHcCCCccCCCceE-EEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccC
Confidence 4689999999999999982 33343 666653 332 122 4688999999996
Q ss_pred CCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------CCC-CCCc-------chhhhhhc
Q 044359 128 SNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------GYT-GSTK-------SMLISNTV 188 (401)
Q Consensus 128 ~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~~-~~d~-------~~~i~~~l 188 (401)
.++++++ .+|+|++.||..|.++|++|..+.|||+++|.++.. +.. +.++ +..-..++
T Consensus 162 --gp~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~~~dg~v 238 (416)
T 2wge_A 162 --AGVMTPV-SACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFV 238 (416)
T ss_dssp --SCEECCC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBTTCCCBC
T ss_pred --CCccccc-CchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccccCCCCcc
Confidence 5899999 599999999999999999999999999999986543 110 0000 00013689
Q ss_pred ccccceEEEEecCCCCc---cccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCC
Q 044359 189 FRMGGAAILLSNRQQDK---HIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGP 265 (401)
Q Consensus 189 fGDGAaA~ll~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 265 (401)
|||||+|+||++.+... .+...++.+ +....|+.. +..+ +. .. ....+.++..+++
T Consensus 239 ~geGaaavvL~~~~~A~~~g~~~~a~i~g---~~~~~dg~~---~~~p-~~----------~~-~~~~~ai~~al~~--- 297 (416)
T 2wge_A 239 FGEAGALMLIETEEHAKARGAKPLARLLG---AGITSDAFH---MVAP-AA----------DG-VRAGRAMTRSLEL--- 297 (416)
T ss_dssp BBCEEEEEEEEEHHHHHHTTCCCSEEEEE---EEEEECCSC---SSSC-CT----------TC-HHHHHHHHHHHHH---
T ss_pred ccCceEEEEECcHHHHHHCCCceEEEEEE---EEEecCCCC---ccCC-CC----------Ch-HHHHHHHHHHHHH---
Confidence 99999999998754211 011122332 222223221 1111 00 00 0111122211111
Q ss_pred CCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHHHH----HHcCCCchhhhhhHHHHhhhcCcccchH
Q 044359 266 HVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVE----ENLKLSKEDGEASRMTLYRFGNTSSSSY 341 (401)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~~~----~~lgi~~e~~~~s~~~~~~~Gn~~sasi 341 (401)
+++. ++|||+|.+|..+...-+.++ +.++.. ++.. ...-..+||+.+|+=
T Consensus 298 --------------------agl~---~~dId~ve~HgtgT~~gD~~E~~al~~~~~~--~~~v-~s~k~~~GH~~gAsG 351 (416)
T 2wge_A 298 --------------------AGLS---PADIDHVNAHGTATPIGDAAEANAIRVAGCD--QAAV-YAPKSALGHSIGAVG 351 (416)
T ss_dssp --------------------HTCC---GGGCCEEECCCCCCHHHHHHHHHHHHHTTCT--TSEE-ECTHHHHCBCGGGHH
T ss_pred --------------------cCCC---HHHCCEEEECCCCCcCCCHHHHHHHHHhccC--CCCc-cCCcccccCcHHHHH
Confidence 2565 799999999988776655432 334422 3321 134567899998876
Q ss_pred HHHHHHH---HHcCCCC------------------------CCCeEEEEeeccchhhcceeee
Q 044359 342 WYELCYL---EAKGKVK------------------------KGDRVWQIAFGSGFKVNSAVWK 377 (401)
Q Consensus 342 ~~~L~~~---~~~g~l~------------------------~Gd~vll~~~G~G~s~~~~~l~ 377 (401)
.+.|... ++.+.+. +-.+++.-+||.|-+-..++|+
T Consensus 352 ~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~ 414 (416)
T 2wge_A 352 ALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGEPRYGDYRYAVNNSFGFGGHNVALAFG 414 (416)
T ss_dssp HHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEECCSSCEECCCCEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCCCCCccCCCCEEEEeCcccCceeEEEEEE
Confidence 6655432 3333311 2245677889988887777776
No 72
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.56 E-value=4.9e-13 Score=144.76 Aligned_cols=249 Identities=15% Similarity=0.163 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCE----EEEeee-cCCCC-------------C-----cHHHHHHHHcCCCCCcceEE
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDI----LVTNCS-IFCPT-------------P-----SISSMIINKFGFRSNIKSIN 134 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~-~~~~~-------------p-----~~a~~l~~~LGl~~~~~~~~ 134 (401)
..+|+.+|+++||+++|+++++||. |+++++ .++.. | ..+.+|+..||+. .++++
T Consensus 95 ~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--Gps~t 172 (915)
T 2qo3_A 95 QQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLE--GPSIS 172 (915)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBC--SCEEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCC--CCEEE
Confidence 5689999999999999999999994 777653 44321 1 3678999999996 49999
Q ss_pred eecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------CC-------CCCCcchhhhhhcccccceEE
Q 044359 135 LSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------GY-------TGSTKSMLISNTVFRMGGAAI 196 (401)
Q Consensus 135 i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~-------~~~d~~~~i~~~lfGDGAaA~ 196 (401)
|. .+|+|++.||..|.++|++|.++.+|++++|.++.. +. ++.+. ..+++||||+|+
T Consensus 173 v~-taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~a----dG~v~gEGagav 247 (915)
T 2qo3_A 173 VD-TACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGA----DGFGFSEGVTLV 247 (915)
T ss_dssp EE-CGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTC----CCBCBBCEEEEE
T ss_pred EC-CCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCC----CceeecCceEEE
Confidence 99 599999999999999999999999999999987531 11 11122 368999999999
Q ss_pred EEecCCCCc--cccce-EEeeeeeecccCCccccccccccccCCCCeeeEeccCchHH--HHHHHHHHHHhhCCCCCchh
Q 044359 197 LLSNRQQDK--HIAKY-KLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPV--AARALRINISQLGPHVLPYS 271 (401)
Q Consensus 197 ll~~~~~~~--~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 271 (401)
||++.+... +...+ .+.+ +....|+... .+ ..|.. ..+.++..+++
T Consensus 248 VL~~~~~A~~~g~~i~a~I~G---~~~~~dg~~~-~~----------------~~p~~~~~~~~i~~Al~~--------- 298 (915)
T 2qo3_A 248 LLERLSEARRNGHEVLAVVRG---SALNQDGASN-GL----------------SAPSGPAQRRVIRQALES--------- 298 (915)
T ss_dssp EEEEHHHHHHTTCCCCEEEEE---EEEEECCSCS-ST----------------TCCCHHHHHHHHHHHHHH---------
T ss_pred EEeEhHHhhhCCCCeEEEEEE---EEEecCCCcc-CC----------------CCCCHHHHHHHHHHHHHH---------
Confidence 998754211 00111 2222 2222232111 00 01111 11112211111
Q ss_pred HHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHH-----HHHHHHcCCCch---hhhhhHHHHhhhcCcccchHHH
Q 044359 272 EQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAII-----DAVEENLKLSKE---DGEASRMTLYRFGNTSSSSYWY 343 (401)
Q Consensus 272 ~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~-----~~~~~~lgi~~e---~~~~s~~~~~~~Gn~~sasi~~ 343 (401)
+|+. ++|||+|.+|..+..+- ..+.+.++.... .+.. -..-..+||+.+|+=..
T Consensus 299 --------------Agl~---p~dId~ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~v-gs~K~~iGH~~~AaG~~ 360 (915)
T 2qo3_A 299 --------------CGLE---PGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWL-GSVKSNIGHTQAAAGVT 360 (915)
T ss_dssp --------------TTCC---GGGCCEEECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEE-ECTHHHHCBCGGGHHHH
T ss_pred --------------cCCC---HHHCcEEEecCCCCccCCHHHHHHHHHHhccccCCCCcccc-cCcccceeCCccccchH
Confidence 3666 79999999998764433 345667776432 2221 14678899999988776
Q ss_pred HHHHH---HHcCCCC--------------------------------CCCeEEEEeeccchhhcceeeeeec
Q 044359 344 ELCYL---EAKGKVK--------------------------------KGDRVWQIAFGSGFKVNSAVWKCVS 380 (401)
Q Consensus 344 ~L~~~---~~~g~l~--------------------------------~Gd~vll~~~G~G~s~~~~~l~~~~ 380 (401)
.|... ++.+.+. .-.+.++-+||.|-+-+.++|+-..
T Consensus 361 ~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 432 (915)
T 2qo3_A 361 GLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAP 432 (915)
T ss_dssp HHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred HHHHHHHHHhcCCCCCCCCCCCCCcccccccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeecc
Confidence 66543 3333321 1135678899999888889987643
No 73
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.50 E-value=3.1e-12 Score=139.09 Aligned_cols=322 Identities=16% Similarity=0.130 Sum_probs=187.5
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCC---CChHH--HHH
Q 044359 2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPD---VSLKR--SRE 76 (401)
Q Consensus 2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~---~~l~~--~~~ 76 (401)
.+|.|+|+|+.+|.- .+.+++.+.+.. +.-...+.+. +|-....+...|.-..++...+.+. -+-++ ..+
T Consensus 4 ~~IaIvGmg~r~P~~---~~~~~~W~~l~~-g~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~~mD 78 (965)
T 3hhd_A 4 EEVVIAGMSGKLPES---ENLQEFWDNLIG-GVDMVTDDDR-RWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQAHTMD 78 (965)
T ss_dssp CCEEEEEEEEEBTTB---SSHHHHHHHHHT-TCCCEECSSS-SSCTTGGGCCSCEECCSCSSCCCTTTTTCCHHHHHTSC
T ss_pred CCEEEEeeeEECCCC---CCHHHHHHHHHc-CCCcccCCCc-ccccccccCcccccccCChhhcChhhcCCCHHHHhhcC
Confidence 578999999999997 699999987653 1110000000 0000000001110000111101110 00011 112
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcC----EEEEeee-cCC-------------------CCCcHHHHHHHHcCCCCCcce
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSID----ILVTNCS-IFC-------------------PTPSISSMIINKFGFRSNIKS 132 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~-~~~-------------------~~p~~a~~l~~~LGl~~~~~~ 132 (401)
....|+.+++.+||+++|+++++|| .++++++ .++ ..+..+.+|+..||+. .++
T Consensus 79 p~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--GPs 156 (965)
T 3hhd_A 79 PQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR--GPS 156 (965)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC--SCE
T ss_pred HHHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCC--CCe
Confidence 3467999999999999999999999 6777653 221 2345788999999997 499
Q ss_pred EEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------C-------CCCCCcchhhhhhcccccce
Q 044359 133 INLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------G-------YTGSTKSMLISNTVFRMGGA 194 (401)
Q Consensus 133 ~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~-------~~~~d~~~~i~~~lfGDGAa 194 (401)
+.|+ .+|+|++.||.+|.+.|++|.++.+|+.++|.++.. + .++.+. ..+++||||+
T Consensus 157 ~tvd-tACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~a----dG~~~gEGag 231 (965)
T 3hhd_A 157 IALD-TACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAG----NGYCRSEGVV 231 (965)
T ss_dssp EEEE-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBTTC----CSBCBBCEEE
T ss_pred eeec-CchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcCCCCccccchhcc----CCccccceEE
Confidence 9999 599999999999999999999999999999987521 0 111122 3578999999
Q ss_pred EEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHH
Q 044359 195 AILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQL 274 (401)
Q Consensus 195 A~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (401)
++||++.+.... ..-.++ .+....|+.....+..| + .....+.+++.+++
T Consensus 232 avvL~~l~~A~~-i~a~I~---g~~~n~dg~~~~~~t~P-------------~-~~~q~~~i~~Al~~------------ 281 (965)
T 3hhd_A 232 AVLLTKKSLARR-VYATIL---NAGTNTDGFKEQGVTFP-------------S-GDIQEQLIRSLYQS------------ 281 (965)
T ss_dssp EEEEEEGGGCSS-CSEEEE---EEEEEECCCCTTCTTSC-------------C-HHHHHHHHHHHHHH------------
T ss_pred EEEEecHHHcCc-ccEEEE---eeeccCCCCCCCCCcCC-------------C-HHHHHHHHHHHHHH------------
Confidence 999998654321 011222 22222333211111110 0 01111122222111
Q ss_pred HHHHHHHhhhccCCCcchhhhcceEeecCCChHHHH-----HHHHHcCCCch-hhhhhHHHHhhhcCcccchHHHHHHH-
Q 044359 275 KYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIID-----AVEENLKLSKE-DGEASRMTLYRFGNTSSSSYWYELCY- 347 (401)
Q Consensus 275 ~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~-----~~~~~lgi~~e-~~~~s~~~~~~~Gn~~sasi~~~L~~- 347 (401)
+|+. ++|||++-.|-.+-..-+ .+.+.++-..+ .+.. -.+-.++||+.+|+=...|-.
T Consensus 282 -----------Agl~---p~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~~~~~~~~v-gs~Ks~iGH~~~AaG~~~lik~ 346 (965)
T 3hhd_A 282 -----------AGVA---PESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLI-GSTKSNMGHPEPASGLAALAKV 346 (965)
T ss_dssp -----------TTCC---GGGEEEEECCCCCCTTHHHHHHHHHHHHHCSSCSSCEEE-ECTHHHHCBCGGGHHHHHHHHH
T ss_pred -----------hCCC---HHHhccccccCCCCCCCCHHHHHHHHHHhcccCCCceee-eccccccccchhhhhHHHHHHH
Confidence 3666 799999999977654433 34455653222 2211 135567899998886555433
Q ss_pred --HHHcCCCC-----------------------------CCCeEEEEeeccchhhcceeeeeec
Q 044359 348 --LEAKGKVK-----------------------------KGDRVWQIAFGSGFKVNSAVWKCVS 380 (401)
Q Consensus 348 --~~~~g~l~-----------------------------~Gd~vll~~~G~G~s~~~~~l~~~~ 380 (401)
+++.+.+. +..+++.-+||.|-+-+.++|+-..
T Consensus 347 ~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~~~~ 410 (965)
T 3hhd_A 347 LLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPVRGGNVGINSFGFGGSNVHIILRPNT 410 (965)
T ss_dssp HHHHHHTEECCCSSCCSBCTTCHHHHHTSEEECCSCEECCSCEEEEEEECTTSEEEEEEEEECC
T ss_pred HHHHhcCCcCCccCCCCCCccCcccccCceeecCCCccCCCCeEEEecccCCCceEEEEeccCC
Confidence 23333221 2235678899999888888988543
No 74
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.42 E-value=4e-12 Score=137.69 Aligned_cols=255 Identities=15% Similarity=0.162 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCE----EEEeee-cCCCC-------------------CcHHHHHHHHcCCCCCcceE
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDI----LVTNCS-IFCPT-------------------PSISSMIINKFGFRSNIKSI 133 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~-~~~~~-------------------p~~a~~l~~~LGl~~~~~~~ 133 (401)
...|+.+|+.+||+++|+++++||. |+++++ .++.. ...+.+|+..||+. .+++
T Consensus 116 ~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--Gps~ 193 (917)
T 2hg4_A 116 QQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLE--GPAM 193 (917)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCC--SCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCC--CCeE
Confidence 4689999999999999999999985 666653 34321 13578899999996 3899
Q ss_pred EeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCC-----CC----CCC-----cchhhhhhcccccceEEEEe
Q 044359 134 NLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNG-----YT----GST-----KSMLISNTVFRMGGAAILLS 199 (401)
Q Consensus 134 ~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~-----~~----~~d-----~~~~i~~~lfGDGAaA~ll~ 199 (401)
.|. .+|+|++.||..|.+.|++|.++.+|++++|.++... .. ..+ .+..-..+++||||+|+||+
T Consensus 194 tv~-taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd~~adG~~~gEGagavVL~ 272 (917)
T 2hg4_A 194 TVD-TACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEGAGVLVLQ 272 (917)
T ss_dssp EEE-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTBTTCCCBCBBCEEEEEEEE
T ss_pred eec-CCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcCCccccCcccccccCCCCcceEEEEEEe
Confidence 999 5999999999999999999999999999999876431 00 000 00111468999999999998
Q ss_pred cCCCCc--cccce-EEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHH
Q 044359 200 NRQQDK--HIAKY-KLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKY 276 (401)
Q Consensus 200 ~~~~~~--~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (401)
+.+... +...+ .+.+ +....|+... ... ... .....+.++..+++
T Consensus 273 ~l~~A~~~g~~i~a~I~G---~~~~~dg~~~-~~~-------------~P~-~~~q~~ai~~Al~~-------------- 320 (917)
T 2hg4_A 273 RLSAARREGRPVLAVLRG---SAVNQDGASN-GLT-------------APS-GPAQQRVIRRALEN-------------- 320 (917)
T ss_dssp EHHHHHHTTCCCCEEEEE---EEEEECCSCS-SSS-------------CCC-HHHHHHHHHHHHHH--------------
T ss_pred eHHHHHhCCCCeEEEEEE---EEEecCCCcc-CCC-------------CCC-HHHHHHHHHHHHHH--------------
Confidence 754211 00111 2222 2222222110 000 000 11111122221111
Q ss_pred HHHHHhhhccCCCcchhhhcceEeecCCChHHHH-----HHHHHcCCCch---hhhhhHHHHhhhcCcccchHHHHHHHH
Q 044359 277 LWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIID-----AVEENLKLSKE---DGEASRMTLYRFGNTSSSSYWYELCYL 348 (401)
Q Consensus 277 ~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~-----~~~~~lgi~~e---~~~~s~~~~~~~Gn~~sasi~~~L~~~ 348 (401)
+|+. ++|||++..|..+..+-+ .+.+.+|.... .+.. -..-..+||+.+|+=...|..+
T Consensus 321 ---------Agl~---p~dId~veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~v-gs~K~~iGH~~~AaG~~~lik~ 387 (917)
T 2hg4_A 321 ---------AGVR---AGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWI-GSVKSNIGHTQAAAGVAGVMKA 387 (917)
T ss_dssp ---------HTCC---GGGCCEEECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEE-ECTHHHHCBCGGGTTHHHHHHH
T ss_pred ---------cCCC---HHHCCEEeeccCCCccCcHHHHHHHHHHhccccCCCCceec-cCcccceecchhhhHHHHHHHH
Confidence 3565 799999999998876533 45556665321 2211 1356789999988766555443
Q ss_pred ---HHcCCCC--------------------------------CCCeEEEEeeccchhhcceeeeeec
Q 044359 349 ---EAKGKVK--------------------------------KGDRVWQIAFGSGFKVNSAVWKCVS 380 (401)
Q Consensus 349 ---~~~g~l~--------------------------------~Gd~vll~~~G~G~s~~~~~l~~~~ 380 (401)
++.+.+. .-.+.++-+||.|-+-+.++++-..
T Consensus 388 vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 454 (917)
T 2hg4_A 388 VLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAP 454 (917)
T ss_dssp HHHHHHTEECCCTTCCSBCTTSCC---CCEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred HHHHhcCCcCCCCCCCCCCccCCccccceeecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccCC
Confidence 3333210 1145678899999888889987643
No 75
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=99.21 E-value=2.3e-10 Score=116.57 Aligned_cols=93 Identities=10% Similarity=0.125 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeee---c----------CCCCCcHHHHHHHHcCCCCCcceEEeecccchhHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCS---I----------FCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGI 144 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~---~----------~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~ 144 (401)
+.+|+.+|+++||+++|+++++||.+|.+.. . ....++.+..++..||++ ..+.+.++ .+|+|++
T Consensus 42 ~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~va~~lGl~-~~~~~~~~-~~caSg~ 119 (520)
T 4egv_A 42 SVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRSVARNIGAD-PAHAVLEV-IGGQSPQ 119 (520)
T ss_dssp HHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHHHHHHHTCC-CSEEEECC-SSTTHHH
T ss_pred HHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHHHHHHcCCC-CceEEEec-CCCHHHH
Confidence 6799999999999999999999887764321 0 012345678899999998 47788888 5999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEeeccccC
Q 044359 145 LSISLVKDLLKVHKNSLALVLSMEAISS 172 (401)
Q Consensus 145 ~aL~~A~~~i~~g~~~~vLvv~~e~~s~ 172 (401)
.++..|.+.|++|.++.||++++|.+|.
T Consensus 120 ~av~~AA~aI~aG~advvlAgG~EsMS~ 147 (520)
T 4egv_A 120 HLATEFGGKIAAGENDVVLIFGSENTST 147 (520)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEEEECCC-
T ss_pred HHHHHHHHHHHcCCCCEEEEEEEEeccc
Confidence 9999999999999999999999999874
No 76
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.01 E-value=2.9e-09 Score=125.97 Aligned_cols=260 Identities=10% Similarity=0.068 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcC--------EEEEeeec-C------------------------CCCCcHHHHHHH-
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSID--------ILVTNCSI-F------------------------CPTPSISSMIIN- 122 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId--------~li~~s~~-~------------------------~~~p~~a~~l~~- 122 (401)
....|+.+|+.+||+++|+++++|+ .++++++. + ......+.++..
T Consensus 2646 p~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~ 2725 (3089)
T 3zen_D 2646 RVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQS 2725 (3089)
T ss_dssp HHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHH
Confidence 3578999999999999999999885 46665431 1 011234566654
Q ss_pred HcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCC---------------------CC-----
Q 044359 123 KFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNG---------------------YT----- 176 (401)
Q Consensus 123 ~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~---------------------~~----- 176 (401)
.+|+. .++++++ .+|+|++.||..|.++|++|.++.+|+.++|.++... ++
T Consensus 2726 ~lGl~--GPs~tV~-tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~f~~~~als~~~~~~~~~~sp~~~cr 2802 (3089)
T 3zen_D 2726 YVGGY--GAMVHPV-GACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIGFGDMAATADTEMMRAKGISDSKFSR 2802 (3089)
T ss_dssp TTCCC--SCEECCB-CTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHHTTCCTTTSCC
T ss_pred HcCCC--CCceeec-cchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHHHHHhhhhhcchhhhhccCCcccccC
Confidence 56995 5999999 5999999999999999999999999999999865310 00
Q ss_pred --CCCcchhhhhhcccccceEEEEecCCCCc--cccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHH
Q 044359 177 --GSTKSMLISNTVFRMGGAAILLSNRQQDK--HIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVA 252 (401)
Q Consensus 177 --~~d~~~~i~~~lfGDGAaA~ll~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 252 (401)
+.++ ..+++||||+|+||.+.+... +...+.++. .+....|+... .+..+ +.+. .....+. .
T Consensus 2803 pFd~~~----dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~--g~~~n~Dg~~~-~~~aP--~~g~--~~a~~~~---q 2868 (3089)
T 3zen_D 2803 ANDRRR----LGFLEAQGGGTILLARGDLALKMGLPVLAVVG--YAQSFADGVHT-SIPAP--GLGA--LGAARGG---R 2868 (3089)
T ss_dssp SSBTTC----CCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEE--EEEEECCCCCC-CSSCC--CCGG--GGGSTTG---G
T ss_pred ccccCC----CCEEEeccceEEEEeeHHHHHhCCCceEEEEE--EEEEecCCccc-CccCC--chhH--HhHhhhh---H
Confidence 1122 357899999999999854321 111222221 12222333211 11000 0000 0000000 0
Q ss_pred HHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHH--------HHHHHcCCCc-hhh
Q 044359 253 ARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIID--------AVEENLKLSK-EDG 323 (401)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~--------~~~~~lgi~~-e~~ 323 (401)
.+.++..+++ +|+. ++|||++-.|-.+-.+.+ .+.+.+|... .++
T Consensus 2869 ~~ai~~AL~~-----------------------AGl~---p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~ 2922 (3089)
T 3zen_D 2869 ESTLARSLAQ-----------------------LGVG---ADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPL 2922 (3089)
T ss_dssp GSHHHHHHHT-----------------------TTCC---GGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCE
T ss_pred HHHHHHHHHH-----------------------cCCC---HHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcc
Confidence 0011111110 3566 799999999988765433 3556778654 233
Q ss_pred hhhHHHHhhhcCcccchHHHHH---HHHHHcCCCCC-------------------------------CCeEEEEeeccch
Q 044359 324 EASRMTLYRFGNTSSSSYWYEL---CYLEAKGKVKK-------------------------------GDRVWQIAFGSGF 369 (401)
Q Consensus 324 ~~s~~~~~~~Gn~~sasi~~~L---~~~~~~g~l~~-------------------------------Gd~vll~~~G~G~ 369 (401)
.. ...-..+||+.+|+=...| ...+++|.+.| -.+.++-+||.|-
T Consensus 2923 ~v-~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG 3001 (3089)
T 3zen_D 2923 FI-VSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGH 3001 (3089)
T ss_dssp EE-ECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTT
T ss_pred ee-cccccccCCchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCC
Confidence 21 1455678999888744333 33444443321 1346678899888
Q ss_pred hhcceeeeeec
Q 044359 370 KVNSAVWKCVS 380 (401)
Q Consensus 370 s~~~~~l~~~~ 380 (401)
+-+.++++-..
T Consensus 3002 ~NahvVle~~~ 3012 (3089)
T 3zen_D 3002 VSGLVALVHPE 3012 (3089)
T ss_dssp EEEEEEEECGG
T ss_pred CeEEEEEecCc
Confidence 87788887543
No 77
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.76 E-value=7.4e-07 Score=105.56 Aligned_cols=320 Identities=14% Similarity=0.107 Sum_probs=184.5
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCC---CChHHH--H
Q 044359 1 FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPD---VSLKRS--R 75 (401)
Q Consensus 1 ~~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~---~~l~~~--~ 75 (401)
+++|.|+|+|+-.|.- -+.+++.+.+.. +.-.-.+.+ -+|-....+...|.-..++...+.+. -+-++. .
T Consensus 1 m~~iaI~G~~~~~p~~---~~~~~~w~~l~~-g~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~fd~~~f~i~~~ea~~~ 75 (2512)
T 2vz8_A 1 MEEVVIAGMSGKLPES---ENLEEFWANLIG-GVDMVTADD-RRWKAGLYGLPRRMGKLKDLSRFDASFFGVHSKQANTM 75 (2512)
T ss_dssp CCCEEEEEEEEEBTTB---SSHHHHHHHHHT-TCCCEEECS-SSSCTTGGGCCSEEECCSCSSCCCTTTTTCCHHHHHTS
T ss_pred CCCEEEEeeeeeCCCC---CCHHHHHHHHHc-CCccccCCC-cccccccccCcccceecCCcccCCHhhcCCCHHHHHhc
Confidence 4679999999999986 688999987653 111000000 00000000001110000111001010 010111 1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcC----EEEEeee-cCC--------------C----CC-cHHHHHHHHcCCCCCcc
Q 044359 76 EETEEVLCTIVKDLLSKHKINPKSID----ILVTNCS-IFC--------------P----TP-SISSMIINKFGFRSNIK 131 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~-~~~--------------~----~p-~~a~~l~~~LGl~~~~~ 131 (401)
.....|+.+++.+||+++|+++++++ .|+++++ .++ . .+ ..+.+|...+|+. -+
T Consensus 76 dpq~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~--Gp 153 (2512)
T 2vz8_A 76 DPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFK--GP 153 (2512)
T ss_dssp CHHHHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCC--SC
T ss_pred CHHHHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCCC--CC
Confidence 22357999999999999999876543 4555432 111 0 11 2578999999996 58
Q ss_pred eEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC-----------CC-------CCCCcchhhhhhcccccc
Q 044359 132 SINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN-----------GY-------TGSTKSMLISNTVFRMGG 193 (401)
Q Consensus 132 ~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~-------~~~d~~~~i~~~lfGDGA 193 (401)
++.|. .+|+|++.||..|.+.|++|.++.+|+.+++.+... +. ++.+. ..+..|+|+
T Consensus 154 s~tv~-tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~~a----dG~~~gEG~ 228 (2512)
T 2vz8_A 154 SITID-TACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEG----TGYCRAEAV 228 (2512)
T ss_dssp EEEEE-CTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSSTTC----CCBCBBCEE
T ss_pred ceeec-cHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCCCC----CCcceeeeE
Confidence 99999 599999999999999999999999999999974321 11 11223 358899999
Q ss_pred eEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHH
Q 044359 194 AAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQ 273 (401)
Q Consensus 194 aA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (401)
+++||++-+... ..+.+ +..+....|+.....+.. |...+ ...
T Consensus 229 ~~~vLk~l~~A~--~i~a~--i~g~~~n~dg~~~~~~t~----------------P~~~~--q~~--------------- 271 (2512)
T 2vz8_A 229 VAVLLTKKSLAR--RVYAT--ILNAGTNTDGSKEQGVTF----------------PSGDV--QEQ--------------- 271 (2512)
T ss_dssp EEEEEEEGGGCS--CCSEE--EEEEEEEECCCCTTCSSS----------------CCHHH--HHH---------------
T ss_pred EEEEEEEHHHCC--cccEE--EEEEEEcCCCCCCCCCCC----------------CCHHH--HHH---------------
Confidence 999999866432 12211 112222233311111111 11111 111
Q ss_pred HHHHHHHHhhhc--cCCCcchhhhcceEeecCCChHHHH-----HHHHHcCCCch-hhhhhHHHHhhhcCcccchHHHHH
Q 044359 274 LKYLWSVVCKKS--KTYVPNFKKAFEHFCIHAGGRAIID-----AVEENLKLSKE-DGEASRMTLYRFGNTSSSSYWYEL 345 (401)
Q Consensus 274 ~~~~~~~~~~~l--~~l~~~~~~did~~i~Hq~~~~~~~-----~~~~~lgi~~e-~~~~s~~~~~~~Gn~~sasi~~~L 345 (401)
.|.+++ +|+. ++||+++-.|--+-..-+ .+.+.++-... .+.. -++=.++||+-+|+=...|
T Consensus 272 ------~i~~al~~ag~~---p~~i~yveaHGTgT~~gD~~E~~al~~~f~~~~~~~~~i-gS~Ks~iGH~~~AaG~~~~ 341 (2512)
T 2vz8_A 272 ------LIRSLYAPAGPD---PESLEYIEAHGTGTKVGDPQELNGIVNALCATRREPLLI-GSTKSNMGHPEPASGVAAL 341 (2512)
T ss_dssp ------HHHTTSGGGSSC---TTSCCEEECCCCCCTTHHHHHHHHHHHHHCSCSSSCCEE-ECHHHHHCBCGGGHHHHHH
T ss_pred ------HHHHHHHHcCCC---HHHCCEEEeecCCCCCCCHHHHHHHHHHhcccCCCCcee-ecccccccccccccchhHH
Confidence 122222 3666 789999999998866654 34556763222 2211 1456788999888876666
Q ss_pred HH---HHHcCCCC-----------------------------CCCeEEEEeeccchhhcceeeeee
Q 044359 346 CY---LEAKGKVK-----------------------------KGDRVWQIAFGSGFKVNSAVWKCV 379 (401)
Q Consensus 346 ~~---~~~~g~l~-----------------------------~Gd~vll~~~G~G~s~~~~~l~~~ 379 (401)
-. +++.|.+. +..+++.-+||.|-+-+.++++-.
T Consensus 342 ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~~~ 407 (2512)
T 2vz8_A 342 IKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQPN 407 (2512)
T ss_dssp HHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEECCSCCBCCSCCEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHHHCCCcCCCCCCCCCCccccccccCceEecCCCccCCCCeEEEeccCCCCceeEEEEccC
Confidence 54 33333321 123567888999988889999753
No 78
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=98.19 E-value=1.1e-06 Score=97.00 Aligned_cols=117 Identities=10% Similarity=0.096 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHhCCCC-cCCc----C----EEEEeee-cCC-----------------------CCC-cHHHHHHH-H
Q 044359 79 EEVLCTIVKDLLSKHKIN-PKSI----D----ILVTNCS-IFC-----------------------PTP-SISSMIIN-K 123 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~-~~dI----d----~li~~s~-~~~-----------------------~~p-~~a~~l~~-~ 123 (401)
..|+.+++.+||+++|++ |.++ + .++++++ .++ ..+ ..+.++.. .
T Consensus 1013 qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~ 1092 (1688)
T 2pff_A 1013 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1092 (1688)
T ss_dssp TTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHH
Confidence 468999999999999998 6552 1 3333332 221 012 24556777 6
Q ss_pred cCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCCCC---------------------C------
Q 044359 124 FGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGY---------------------T------ 176 (401)
Q Consensus 124 LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~~~---------------------~------ 176 (401)
||+. .+.+.+.+ +|+|++.||..|.+.|++|.++.+||.++|.++.... +
T Consensus 1093 LGl~--GPs~TVdt-ACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRP 1169 (1688)
T 2pff_A 1093 ISSS--GPIKTPVG-ACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRP 1169 (1688)
T ss_dssp CCCC--CCCCCCCC-TTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCS
T ss_pred cCCc--CCeEEecC-CCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHHhccccccChhhhhcCCChhhccCc
Confidence 8986 58999994 9999999999999999999999999999998654210 0
Q ss_pred -CCCcchhhhhhcccccceEEEEecCC
Q 044359 177 -GSTKSMLISNTVFRMGGAAILLSNRQ 202 (401)
Q Consensus 177 -~~d~~~~i~~~lfGDGAaA~ll~~~~ 202 (401)
+.++ ..+++||||+++||.+.+
T Consensus 1170 Fd~~r----dGfv~GEGAGavVLesle 1192 (1688)
T 2pff_A 1170 ATTTR----NGFMEAQGAGIQIIMQAD 1192 (1688)
T ss_dssp SSSSC----CCCCCCSCCEEEEEECSH
T ss_pred CccCC----CCCccccceEEEEeCcHH
Confidence 0011 357899999999999854
No 79
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=97.84 E-value=6.2e-05 Score=85.69 Aligned_cols=118 Identities=9% Similarity=0.063 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHhCCCC-cCCc----C----EEEEeee-cC----------C--------------CCCcHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKIN-PKSI----D----ILVTNCS-IF----------C--------------PTPSISSMIINK 123 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~-~~dI----d----~li~~s~-~~----------~--------------~~p~~a~~l~~~ 123 (401)
...|+.+++.+||+++|++ |.++ + .++++++ .+ . ..-..+.++...
T Consensus 1211 ~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~ 1290 (1887)
T 2uv8_A 1211 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1290 (1887)
T ss_dssp HHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHH
Confidence 4579999999999999994 7662 2 3444432 11 0 112246677774
Q ss_pred -cCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC----------CC-----------C-----
Q 044359 124 -FGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN----------GY-----------T----- 176 (401)
Q Consensus 124 -LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~----------~~-----------~----- 176 (401)
||+. .+.+.+.+ +|++++.||..|.+.|++|.++.+||.++|.++.. .. +
T Consensus 1291 ~lgl~--GP~~tv~t-ACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~R 1367 (1887)
T 2uv8_A 1291 LISSS--GPIKTPVG-ACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSR 1367 (1887)
T ss_dssp TTCCC--SCCCCCCC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCC
T ss_pred HcCCc--cceEEeec-ccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhcccCCCccCcC
Confidence 9996 48899994 99999999999999999999999999999975421 00 0
Q ss_pred --CCCcchhhhhhcccccceEEEEecCC
Q 044359 177 --GSTKSMLISNTVFRMGGAAILLSNRQ 202 (401)
Q Consensus 177 --~~d~~~~i~~~lfGDGAaA~ll~~~~ 202 (401)
..++ ..++.||||+++||.+.+
T Consensus 1368 Pfd~~r----~Gfv~gEGag~vVL~~~~ 1391 (1887)
T 2uv8_A 1368 PATTTR----NGFMEAQGAGIQIIMQAD 1391 (1887)
T ss_dssp TTBTTC----CSBCBBCEEEEEEEEEHH
T ss_pred CCcccC----CCcccccceEEEEEccHH
Confidence 0112 357899999999999854
No 80
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=97.78 E-value=8.3e-05 Score=84.51 Aligned_cols=118 Identities=12% Similarity=0.064 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHhCCCC-cCCc----C----EEEEeee-cC-------------------CC----CC-cHHHHHHH-
Q 044359 78 TEEVLCTIVKDLLSKHKIN-PKSI----D----ILVTNCS-IF-------------------CP----TP-SISSMIIN- 122 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~-~~dI----d----~li~~s~-~~-------------------~~----~p-~~a~~l~~- 122 (401)
...|+.+++.+||+++|++ |.++ + .+++++. .+ +. .+ ..+.+|..
T Consensus 1186 ~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~ 1265 (1878)
T 2uv9_A 1186 VTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNML 1265 (1878)
T ss_dssp HHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHH
Confidence 4579999999999999998 7652 2 4444432 22 00 11 24567777
Q ss_pred HcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCeEEEEeeccccCC----------CC-----------C-----
Q 044359 123 KFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSN----------GY-----------T----- 176 (401)
Q Consensus 123 ~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~vLvv~~e~~s~~----------~~-----------~----- 176 (401)
.||+. .+.+.+.+ +|++++.||.+|.+.|++|.++.+||.++|.++.. .. +
T Consensus 1266 ~lg~~--GP~~tv~t-ACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~~~f~~m~als~~~de~a~g~~p~~~~R 1342 (1878)
T 2uv9_A 1266 LLSST--GPIKTPVG-ACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFARGREPGEMSR 1342 (1878)
T ss_dssp TCCCC--CCBCCBCC-GGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCC
T ss_pred hcCCC--CCeEEEcC-cchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhhcCCCcccCcC
Confidence 49996 48889995 99999999999999999999999999999975421 00 0
Q ss_pred --CCCcchhhhhhcccccceEEEEecCC
Q 044359 177 --GSTKSMLISNTVFRMGGAAILLSNRQ 202 (401)
Q Consensus 177 --~~d~~~~i~~~lfGDGAaA~ll~~~~ 202 (401)
..++ ..++.||||+++||.+.+
T Consensus 1343 Pfd~~r----~Gfv~gEGag~vVL~~~~ 1366 (1878)
T 2uv9_A 1343 PTSTTR----NGFMESQGCGVQVIMTAQ 1366 (1878)
T ss_dssp SSBTTC----CCBCBBCEEEEEEEEEHH
T ss_pred CCccCC----CCCcccceeEEEEEeeHH
Confidence 0112 357899999999999854
No 81
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=94.54 E-value=0.12 Score=49.75 Aligned_cols=84 Identities=11% Similarity=0.054 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEee---cccchhHHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLS---GMGCSAGILSISLVKDL 153 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~---~~gC~~~~~aL~~A~~~ 153 (401)
.+.....++++++|+++|++++|||.++... ....+-..++++||++++.....+. |+++++-..+| ..+
T Consensus 263 ~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq----~n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L---~~~ 335 (365)
T 3gwa_A 263 FSLAEVPRAADRLLALAGEPRENIDCFVLHQ----ANRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLAL---ETM 335 (365)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECC----CCHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcC----CCHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHH---HHH
Confidence 3456667889999999999999999998543 2233457789999998554443332 24444444444 344
Q ss_pred HHcC---CCCeEEEEee
Q 044359 154 LKVH---KNSLALVLSM 167 (401)
Q Consensus 154 i~~g---~~~~vLvv~~ 167 (401)
++.| +.+++|+++.
T Consensus 336 ~~~g~~~~Gd~vll~~f 352 (365)
T 3gwa_A 336 RANGTLARGMRLMLLGF 352 (365)
T ss_dssp HHTTCCCTTCEEEEEEE
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4554 3577887773
No 82
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=94.49 E-value=0.11 Score=49.11 Aligned_cols=83 Identities=14% Similarity=0.196 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEe---ecccchhHHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINL---SGMGCSAGILSISLVKDL 153 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i---~~~gC~~~~~aL~~A~~~ 153 (401)
.+.+...++++++|+++|++++|||+++.... .+.+-..++++||++++.....+ .|+++++-..+|. .+
T Consensus 231 ~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~----~~~i~~~~~~~lgl~~~~~~~~l~~~GNt~sasi~~~L~---~~ 303 (333)
T 4dfe_A 231 LAVNVLEKVAVEALEKANLSAEQIDWLIPHQA----NIRIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALD---VA 303 (333)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCS----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHhCCCHHHhhhhHHhcCchHHHHHHHHHH---HH
Confidence 34456678899999999999999999875431 22345678999999854333333 2344555555554 34
Q ss_pred HHcC---CCCeEEEEe
Q 044359 154 LKVH---KNSLALVLS 166 (401)
Q Consensus 154 i~~g---~~~~vLvv~ 166 (401)
++.| +.+++|+++
T Consensus 304 ~~~g~~~~Gd~vll~~ 319 (333)
T 4dfe_A 304 VRDGRIKRGQNVLIEG 319 (333)
T ss_dssp HHTTCSCTTCEEEEEE
T ss_pred HHcCCCCCCCEEEEEE
Confidence 4444 357777776
No 83
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=94.43 E-value=0.086 Score=50.57 Aligned_cols=83 Identities=11% Similarity=0.090 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEe----ecccchhHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINL----SGMGCSAGILSISLVKD 152 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i----~~~gC~~~~~aL~~A~~ 152 (401)
.+.....++++++|+++|++++|||.+|+........ ..++++||+++.....++ .|+++++-..+|..+
T Consensus 235 ~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~~----~~~~~~lgl~~ek~~~~~~~~~GNt~aAsipl~L~~~-- 308 (357)
T 3s3l_A 235 RYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGTG----HELHDLLGLPDERTSWAYGRTTGHVGAGDQYAGLAHL-- 308 (357)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCSS----CCHHHHHTSCGGGBTHHHHHHHCBCTTCHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHHH----HHHHHHcCCCHHHhHHHhccccccchHhHHHHHHHHH--
Confidence 4556678899999999999999999999633211112 347888999855433332 234455555555443
Q ss_pred HHHcC---CCCeEEEEe
Q 044359 153 LLKVH---KNSLALVLS 166 (401)
Q Consensus 153 ~i~~g---~~~~vLvv~ 166 (401)
++.| +.+++|+++
T Consensus 309 -~~~g~l~~Gd~vll~~ 324 (357)
T 3s3l_A 309 -VENALVQPGDRVLLFG 324 (357)
T ss_dssp -HHTTCCCTTCEEEEEC
T ss_pred -HHcCCCCCCCEEEEEE
Confidence 3443 346666655
No 84
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=94.42 E-value=0.13 Score=48.57 Aligned_cols=84 Identities=14% Similarity=0.207 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEe---ecccchhHHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINL---SGMGCSAGILSISLVKDL 153 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i---~~~gC~~~~~aL~~A~~~ 153 (401)
.+.+...++++++|+++|++++|||.++... ..+.+-..++++||++++.....+ .|+++++-..+|.. +
T Consensus 221 ~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq----~~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~---~ 293 (323)
T 3il3_A 221 LAVRELSNVVEETLLANNLDKKDLDWLVPHQ----ANLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDE---A 293 (323)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTTCCEEEECC----SCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcC----CCHHHHHHHHHHcCcCHHHhhccHhhcCchHHHHHHHHHHH---H
Confidence 3455667889999999999999999987543 123355678999999855443333 23455555555543 3
Q ss_pred HHcC---CCCeEEEEee
Q 044359 154 LKVH---KNSLALVLSM 167 (401)
Q Consensus 154 i~~g---~~~~vLvv~~ 167 (401)
++.| +.+++|+++.
T Consensus 294 ~~~g~~~~Gd~vll~~~ 310 (323)
T 3il3_A 294 IRDGRIQRGQLLLLEAF 310 (323)
T ss_dssp HHTTSSCTTCEEEEEEE
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4444 3577887763
No 85
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=94.36 E-value=0.11 Score=49.55 Aligned_cols=87 Identities=8% Similarity=0.129 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceE-E---eecccchhHHHHHHHHH
Q 044359 76 EETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSI-N---LSGMGCSAGILSISLVK 151 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~-~---i~~~gC~~~~~aL~~A~ 151 (401)
+.+.....++++++|+++|++++|||+++... .....-..++++||++++.... . ..|+++++-..+|..+.
T Consensus 245 ~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq----~~~~i~~~~~~~Lgl~~~~~~~~~l~~~GNtssasi~~~L~~~~ 320 (350)
T 4ewp_A 245 RWAVWSMAKVAREALDAAGVEPEDLAAFIPHQ----ANMRIIDEFAKQLKLPESVVVARDIADAGNTSAASIPLAMHRLL 320 (350)
T ss_dssp HHHHHTHHHHHHHHHHHHTCCGGGEEEEEECC----SCHHHHHHHHHHTTCCTTSEECCTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHhhcCChhHhceEEecC----CCHHHHHHHHHHcCcChHhEEecccccccchHHHHHHHHHHHHH
Confidence 34555667899999999999999999988543 2233456789999997543222 1 23455555555564443
Q ss_pred HHHHcCCCCeEEEEe
Q 044359 152 DLLKVHKNSLALVLS 166 (401)
Q Consensus 152 ~~i~~g~~~~vLvv~ 166 (401)
+-=+-.+++++|+++
T Consensus 321 ~~g~~~~Gd~vll~~ 335 (350)
T 4ewp_A 321 EENPELSGGLALQIG 335 (350)
T ss_dssp HHCGGGTTSEEEEEE
T ss_pred HhCCCCCcCEEEEEE
Confidence 321112457888776
No 86
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=94.35 E-value=0.12 Score=48.85 Aligned_cols=82 Identities=11% Similarity=0.218 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCC-cceE---EeecccchhHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSN-IKSI---NLSGMGCSAGILSISLVKDL 153 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~-~~~~---~i~~~gC~~~~~aL~~A~~~ 153 (401)
+.+...++.+++|+++|++++|||.++.... ....-..+.+.||++.+ .... .+.|+++++...+|. .+
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~----~~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~---~~ 301 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQA----NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALD---RL 301 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCS----CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHH---HH
Confidence 3455678899999999999999999886532 11122358889999754 2221 123355555555554 33
Q ss_pred HHcC---CCCeEEEEe
Q 044359 154 LKVH---KNSLALVLS 166 (401)
Q Consensus 154 i~~g---~~~~vLvv~ 166 (401)
++.+ +.+++|+++
T Consensus 302 ~~~g~~~~G~~vll~~ 317 (339)
T 1mzj_A 302 VRSGAVPGGGPALMIG 317 (339)
T ss_dssp HHHTSSCTTCEEEEEE
T ss_pred HHcCCCCCCCEEEEEE
Confidence 4444 356777665
No 87
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=94.33 E-value=0.087 Score=49.77 Aligned_cols=82 Identities=10% Similarity=0.125 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEE---eecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSIN---LSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~---i~~~gC~~~~~aL~~A~~~i 154 (401)
+.+...++.+++|+++|++++|||.++.... ....-..+.+.||++++..... +.|+++++...+|. .++
T Consensus 222 ~~~~~~~~i~~aL~~agl~~~did~~~~H~~----~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~---~~~ 294 (331)
T 2x3e_A 222 AVTQMSDSVRRVLDRVGWQASDLHHLVPHQA----NTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALA---HGL 294 (331)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCC----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHH---HHH
Confidence 3456678899999999999999999886532 1112345888999974332222 22345555555554 334
Q ss_pred HcC---CCCeEEEEe
Q 044359 155 KVH---KNSLALVLS 166 (401)
Q Consensus 155 ~~g---~~~~vLvv~ 166 (401)
+.+ +.+++|+++
T Consensus 295 ~~~~~~~G~~vll~~ 309 (331)
T 2x3e_A 295 RQGILRDGGNMVLTG 309 (331)
T ss_dssp HTTCSCTTCEEEEEE
T ss_pred HhCCCCCCCEEEEEE
Confidence 444 356777766
No 88
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=94.24 E-value=0.11 Score=49.75 Aligned_cols=84 Identities=15% Similarity=0.327 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEe---ecccchhHHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINL---SGMGCSAGILSISLVKDL 153 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i---~~~gC~~~~~aL~~A~~~ 153 (401)
.+.+...++++++|+++|++++|||.++... ..+.+-..++++||++++.....+ .|+++++-..+|..+..-
T Consensus 251 ~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq----~n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~ 326 (359)
T 3h78_A 251 HASQTLVRIAGEMLAAHELTLDDIDHVICHQ----PNLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPD 326 (359)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECC----SCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHh
Confidence 3455667899999999999999999987543 223345678999999854433332 345666666666655443
Q ss_pred HHcCCCCeEEEEe
Q 044359 154 LKVHKNSLALVLS 166 (401)
Q Consensus 154 i~~g~~~~vLvv~ 166 (401)
-.+.+++|+++
T Consensus 327 --l~~Gd~vll~~ 337 (359)
T 3h78_A 327 --IQPGQRVLVLT 337 (359)
T ss_dssp --SCTTCEEEEEE
T ss_pred --CCCCCEEEEEE
Confidence 33457787776
No 89
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=94.18 E-value=0.083 Score=50.19 Aligned_cols=89 Identities=17% Similarity=0.184 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceE-------Eeecc--------cchhH
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSI-------NLSGM--------GCSAG 143 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~-------~i~~~--------gC~~~ 143 (401)
...+.++.++.|+++|++|+|+|.|+..--. ...-.+...+.+++|++...... |-.++ ||+..
T Consensus 206 aPaA~~ti~~~l~d~g~~~~d~D~ivtgdL~-q~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~ 284 (347)
T 3lma_A 206 APAAADTIKQHLEDLGRTPDDYDLILTGDLS-GVGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAV 284 (347)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEEESCH-HHHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHH
T ss_pred hHHHHHHHHHHHHHhCCCHHHcCEEecCChH-HHHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHH
Confidence 3445566699999999999999999864210 11123566788899987543333 33334 66665
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEeecc
Q 044359 144 ILSISLVKDLLKVHKNSLALVLSMEA 169 (401)
Q Consensus 144 ~~aL~~A~~~i~~g~~~~vLvv~~e~ 169 (401)
+..=.+-. .++.|..++||+|+.-.
T Consensus 285 v~~~~~~~-~~~~g~~~ril~~~tGa 309 (347)
T 3lma_A 285 VTFAHIFK-EIEAGRLNRVLVVATGA 309 (347)
T ss_dssp HHHHTHHH-HHHTTSCSEEEEEEEEE
T ss_pred HHHHHHHH-HHhcCcccEEEEEeccc
Confidence 55433333 47778899999998655
No 90
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=94.06 E-value=0.12 Score=49.31 Aligned_cols=89 Identities=12% Similarity=0.125 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEe---ecccchhHHHHHHHHHH
Q 044359 76 EETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINL---SGMGCSAGILSISLVKD 152 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i---~~~gC~~~~~aL~~A~~ 152 (401)
+.+.....++++++|+++|++++|||.++... ..+.+-..++++||++++.....+ .|+++++-..+|..+..
T Consensus 242 ~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq----~~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~ 317 (345)
T 3s21_A 242 IEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQ----VSRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKE 317 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGCSEEEECC----SCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHHH
Confidence 34456667888999999999999999998643 122345678999999854332222 33555555555554433
Q ss_pred HHHcCCCCeEEEEeec
Q 044359 153 LLKVHKNSLALVLSME 168 (401)
Q Consensus 153 ~i~~g~~~~vLvv~~e 168 (401)
-=+-.+.+++|+++.-
T Consensus 318 ~g~~~~Gd~vll~~~G 333 (345)
T 3s21_A 318 LGRLKKGDRIALLGIG 333 (345)
T ss_dssp HTCCCTTCEEEEEEEE
T ss_pred cCCCCCCCEEEEEEEC
Confidence 2111245788877743
No 91
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=93.94 E-value=0.11 Score=49.72 Aligned_cols=87 Identities=13% Similarity=0.064 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEE---eecccchhHHHHHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSIN---LSGMGCSAGILSISLVKDL 153 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~---i~~~gC~~~~~aL~~A~~~ 153 (401)
.+.+...++++++|+++|++++|||+++... .....-..++++||++++..... ..|+++++-..+|..+..-
T Consensus 241 ~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq----~~~~i~~~~~~~Lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~ 316 (354)
T 4efi_A 241 FTLNAVPKLVSRTLDIAGRDKDSYDAFLFHQ----ANLFMLKHLAKKAGLPAERVPVNIGEYGNTSCASIPLLITTELKD 316 (354)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECC----CCHHHHHHHHHHTTCCGGGSCCCHHHHCBCGGGHHHHHHHHHSHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHhCcCHHHHHHHHhhhCcHHHHHHHHHHHHHHHh
Confidence 3456677889999999999999999998654 12334567999999985443332 2346666666777655332
Q ss_pred HHcCCCCeEEEEee
Q 044359 154 LKVHKNSLALVLSM 167 (401)
Q Consensus 154 i~~g~~~~vLvv~~ 167 (401)
=+-.+.+++|+++.
T Consensus 317 g~~~~Gd~vll~~f 330 (354)
T 4efi_A 317 RLKEETLQLGMFGF 330 (354)
T ss_dssp HHHHSCEEEEEEEE
T ss_pred CCCCCCCEEEEEEE
Confidence 11123477887773
No 92
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=93.63 E-value=0.17 Score=47.71 Aligned_cols=84 Identities=12% Similarity=0.260 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCC-cceEE---eecccchhHHHHHHHHHHHH
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSN-IKSIN---LSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~-~~~~~---i~~~gC~~~~~aL~~A~~~i 154 (401)
.....++++++|+++|++++|||.++...+ ....-..+.+.||++++ ..... ..|+++++...+|..+..--
T Consensus 231 ~~~~~~~i~~al~~agl~~~dId~~~~H~~----~~~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~~~~~ 306 (335)
T 1u6e_A 231 AFKMGDVGRRAMDAAGVRPDQIDVFVPHQA----NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTG 306 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEECCS----CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHHHHcC
Confidence 456678899999999999999999886532 11233457889999754 22111 22345555554454433211
Q ss_pred HcCCCCeEEEEe
Q 044359 155 KVHKNSLALVLS 166 (401)
Q Consensus 155 ~~g~~~~vLvv~ 166 (401)
+..+.+++|+++
T Consensus 307 ~~~~g~~~l~~~ 318 (335)
T 1u6e_A 307 AAKPGDLALLIG 318 (335)
T ss_dssp SSCTTCEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 112356777766
No 93
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=93.28 E-value=0.25 Score=46.14 Aligned_cols=84 Identities=15% Similarity=0.210 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEE---eecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSIN---LSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~---i~~~gC~~~~~aL~~A~~~i 154 (401)
+.+...++.+++|+++|++++|||.++...+ ....-..+.+.||+++...... +.++++++...+|..+ +
T Consensus 216 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~----~~~~~d~i~~~lg~~~~~~~~~~~~~Gn~~~As~~~~L~~~---~ 288 (317)
T 1hnj_A 216 AVTELAHIVDETLAANNLDRSQLDWLVPHQA----NLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEA---V 288 (317)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEECCS----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHcCCCHHHhHhhHhhhCcHHHHHHHHHHHHH---H
Confidence 3445678899999999999999999886532 1112345888999864322211 2235555555555433 4
Q ss_pred HcC---CCCeEEEEeec
Q 044359 155 KVH---KNSLALVLSME 168 (401)
Q Consensus 155 ~~g---~~~~vLvv~~e 168 (401)
+.+ +.+++|+++.-
T Consensus 289 ~~~~~~~G~~vll~~~G 305 (317)
T 1hnj_A 289 RDGRIKPGQLVLLEAFG 305 (317)
T ss_dssp HTTCSCTTCEEEEEEEE
T ss_pred HhCCCCCCCEEEEEEEc
Confidence 444 35788877643
No 94
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=93.24 E-value=0.25 Score=45.99 Aligned_cols=82 Identities=13% Similarity=0.238 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEe---ecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINL---SGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i---~~~gC~~~~~aL~~A~~~i 154 (401)
..+-..++.+++|+++|++++|||.++...+ ....-..+.+.||++.+.....+ .+.++++...+|.. ++
T Consensus 210 ~~~~~~~~i~~al~~agl~~~did~~~~H~~----~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~---~~ 282 (313)
T 1zow_A 210 AVRIMGDASTRVVEKANLTSDDIDLFIPHQA----NIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQ---EL 282 (313)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECCS----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHH---HH
Confidence 3445678899999999999999999886532 11122347888998643222222 23455555555543 34
Q ss_pred HcC---CCCeEEEEe
Q 044359 155 KVH---KNSLALVLS 166 (401)
Q Consensus 155 ~~g---~~~~vLvv~ 166 (401)
+.+ +.+++|+++
T Consensus 283 ~~~~~~~g~~vl~~~ 297 (313)
T 1zow_A 283 KNGKLKDDDTIVLVG 297 (313)
T ss_dssp HTTCCCTTCEEEEEE
T ss_pred HcCCCCCCCEEEEEE
Confidence 444 356777665
No 95
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=92.99 E-value=0.25 Score=45.93 Aligned_cols=83 Identities=12% Similarity=0.274 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEE---eecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSIN---LSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~---i~~~gC~~~~~aL~~A~~~i 154 (401)
..+...++++++|+++|++++|||.++...+ .......+.+.||++++..... +.+.+++++..+|..+ +
T Consensus 208 ~~~~~~~~i~~al~~agl~~~did~~~~H~~----~~~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~---~ 280 (309)
T 2ebd_A 208 AVRSMEEVCREVLEKAGVKPEEVSLVIPHQA----NVRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEA---I 280 (309)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCS----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHH---H
Confidence 3445678999999999999999999876532 1112235788999864322211 2234555555555433 4
Q ss_pred HcC---CCCeEEEEee
Q 044359 155 KVH---KNSLALVLSM 167 (401)
Q Consensus 155 ~~g---~~~~vLvv~~ 167 (401)
+.+ +.+++|+++.
T Consensus 281 ~~g~~~~G~~~l~~~~ 296 (309)
T 2ebd_A 281 KEGKVKRGDLILMTAM 296 (309)
T ss_dssp HTTCCCTTCEEEEEEE
T ss_pred HcCCCCCCCEEEEEEE
Confidence 444 3567777663
No 96
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=92.62 E-value=0.27 Score=46.06 Aligned_cols=82 Identities=13% Similarity=0.221 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceE---EeecccchhHHHHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSI---NLSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~---~i~~~gC~~~~~aL~~A~~~i 154 (401)
..+...++.+++|+++|++++|||.++...+. ...-..+.+.||++.+.... .+.+++++++..+|. .++
T Consensus 218 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~----~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~l~---~~l 290 (322)
T 1ub7_A 218 AVRVMNTATLEAIEKAGLTPEDIRLFVPHQAN----LRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALK---EAV 290 (322)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSC----HHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC----HHHHHHHHHHcCCCHHHHHHHHHhhCcHHHHHHHHHHH---HHH
Confidence 34566788999999999999999998865321 11223578889986432221 122244555555443 334
Q ss_pred HcC---CCCeEEEEe
Q 044359 155 KVH---KNSLALVLS 166 (401)
Q Consensus 155 ~~g---~~~~vLvv~ 166 (401)
+.+ +.+++|+++
T Consensus 291 ~~g~~~~g~~~l~~~ 305 (322)
T 1ub7_A 291 DAGRIREGDHVLLVS 305 (322)
T ss_dssp HHTSSCTTCEEEEEE
T ss_pred HhCCCCCCCEEEEEE
Confidence 444 345666655
No 97
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=91.88 E-value=0.16 Score=49.33 Aligned_cols=82 Identities=12% Similarity=0.248 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcce-----E-EeecccchhHHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKS-----I-NLSGMGCSAGILSISLVK 151 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~-----~-~i~~~gC~~~~~aL~~A~ 151 (401)
+.+...++++++|+++|++++|||.++.... ....-..+.++||+++.... + ...|+++++...+| .
T Consensus 285 ~~~~~~~~i~~aL~~agl~~~dId~~~~H~~----~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L---~ 357 (393)
T 1ted_A 285 IFSGVAPVVTEMLWDNGLQISDIDLWAIHPG----GPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVL---E 357 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSCEEECCS----CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCCEEEECCC----cHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHH---H
Confidence 4455668889999999999999999886432 11233468889999754332 1 22233334433444 3
Q ss_pred HHHHcC----CCCeEEEEe
Q 044359 152 DLLKVH----KNSLALVLS 166 (401)
Q Consensus 152 ~~i~~g----~~~~vLvv~ 166 (401)
.+++.+ +.+++|+++
T Consensus 358 ~~~~~g~~~~~Gd~vll~~ 376 (393)
T 1ted_A 358 TMVQQAESAKAISTGVAFA 376 (393)
T ss_dssp HHHHSCSSSSSSEEEEEEE
T ss_pred HHHhcCccCCCCCeEEEEE
Confidence 444544 346777766
No 98
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=91.36 E-value=0.43 Score=46.24 Aligned_cols=76 Identities=18% Similarity=0.324 Sum_probs=46.2
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeec--------ccchhHHHHHHHHHHHH
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSG--------MGCSAGILSISLVKDLL 154 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~--------~gC~~~~~aL~~A~~~i 154 (401)
..|++++|+++|++++|||.+.+.- ........+.+.||+.+ ..+.+++ .||+|....+....++
T Consensus 297 ~~ai~~al~~agl~~~dId~ve~~d----~fa~~~~~~~~~lg~~~--~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L- 369 (395)
T 4e1l_A 297 IPATRKALKKAGLSINDIDLIEANE----AFAAQALAVKNELQIDS--SKLNVNGGAIALGHPIGASGARILVTLIYEM- 369 (395)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCTTTHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecC----hhHHHHHHHHHHhCCCC--CCCCcCCchhhcCCcHHHHHHHHHHHHHHHH-
Confidence 5789999999999999999998531 12234456788899863 2222321 2455444444444444
Q ss_pred HcCCCCeEEEE
Q 044359 155 KVHKNSLALVL 165 (401)
Q Consensus 155 ~~g~~~~vLvv 165 (401)
+....++.|+.
T Consensus 370 ~~~~~~~gl~~ 380 (395)
T 4e1l_A 370 QKRKVETGLAT 380 (395)
T ss_dssp HHHTCSEEEEE
T ss_pred HhcCCCEEEEE
Confidence 43334666543
No 99
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=91.17 E-value=0.15 Score=49.34 Aligned_cols=75 Identities=11% Similarity=0.223 Sum_probs=45.3
Q ss_pred HHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcce-----E-EeecccchhHHHHHHHHHHHHHcC-
Q 044359 85 IVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKS-----I-NLSGMGCSAGILSISLVKDLLKVH- 157 (401)
Q Consensus 85 Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~-----~-~i~~~gC~~~~~aL~~A~~~i~~g- 157 (401)
+++++|+++|++++|||.++..... ...-..+.++||++++... . .+.|+++++...+| ..+++.+
T Consensus 257 ~i~~aL~~agl~~~dId~v~~H~~~----~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L---~~~~~~g~ 329 (382)
T 1u0m_A 257 ALKELAGEHGWDASDLDFYIVHAGG----PRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDAL---RRLFDEGG 329 (382)
T ss_dssp HHHHHHHTTSCCSSCCSCCEEECSH----HHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHH---HHHHHSCC
T ss_pred HHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHH---HHHHHhcC
Confidence 8899999999999999999865321 1123458889999754321 1 22234444444444 4444554
Q ss_pred --CCCeEEEEe
Q 044359 158 --KNSLALVLS 166 (401)
Q Consensus 158 --~~~~vLvv~ 166 (401)
+.+++|+++
T Consensus 330 ~~~Gd~vll~~ 340 (382)
T 1u0m_A 330 VEEGARGLLAG 340 (382)
T ss_dssp CCSSCCCEEEE
T ss_pred CCCCCEEEEEE
Confidence 234555544
No 100
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=91.15 E-value=0.6 Score=45.32 Aligned_cols=94 Identities=10% Similarity=0.155 Sum_probs=52.0
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeec-------ccchhHHHHHHHHHHHHH
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSG-------MGCSAGILSISLVKDLLK 155 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~-------~gC~~~~~aL~~A~~~i~ 155 (401)
..|+++||+++|++++|||.+-..-+ .....-...+.||+.++...+.+++ ...++++..+-.+...|+
T Consensus 299 ~~a~~~al~~Agl~~~dId~ie~hea----fa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~ 374 (401)
T 1ulq_A 299 VPATRKALERAGLSFSDLGLIELNEA----FAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMR 374 (401)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEECCS----BHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEecc----hHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHh
Confidence 68999999999999999998854311 1112223345688732222233321 112223334444444555
Q ss_pred cCCCCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEec
Q 044359 156 VHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSN 200 (401)
Q Consensus 156 ~g~~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~ 200 (401)
.+..+++|+.. +.||-..+|+||++
T Consensus 375 ~~~~~~gl~~~--------------------~~ggG~~~a~v~~~ 399 (401)
T 1ulq_A 375 RRKVQFGLATM--------------------CIGVGQGIAVVVEG 399 (401)
T ss_dssp HTTCSEEEEEE--------------------EETTTEEEEEEEEE
T ss_pred hcCCCEEEEEe--------------------ecCCcccEEEEEEe
Confidence 55455555432 34566667777765
No 101
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=90.58 E-value=0.56 Score=45.66 Aligned_cols=42 Identities=12% Similarity=0.203 Sum_probs=30.7
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCC
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRS 128 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~ 128 (401)
..|++++|+++|++++|||.+-..-. .........+.||+.+
T Consensus 308 ~~a~~~al~~Agl~~~dId~~e~hda----f~~~~l~~~~~lg~~~ 349 (407)
T 3svk_A 308 TPATRKVLDRAGLTIDDIDLFELNEA----FASVVLKFQKDLNIPD 349 (407)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCS----BHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeCh----hHHHHHHHHHHhCCCC
Confidence 57899999999999999999975421 1122345677899863
No 102
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=90.08 E-value=0.6 Score=45.17 Aligned_cols=42 Identities=12% Similarity=0.097 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
...|++++|+++|++++|||.+.+.- ........+.+.||+.
T Consensus 294 ~~~a~~~al~~agl~~~dId~ve~~d----~fa~~~~~~~~~lg~~ 335 (394)
T 3ss6_A 294 PAPAIRKGLEKVDWSLEDADLLEINE----AFAAQYLAVEKELDLD 335 (394)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCC----chHHHHHHHHHHhCCC
Confidence 36789999999999999999998432 1223455678889986
No 103
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=89.22 E-value=0.49 Score=45.84 Aligned_cols=86 Identities=14% Similarity=0.256 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHc-CC--CCCcceE---EeecccchhHHHHHHH
Q 044359 76 EETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKF-GF--RSNIKSI---NLSGMGCSAGILSISL 149 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~L-Gl--~~~~~~~---~i~~~gC~~~~~aL~~ 149 (401)
+.+.....++++++|+++|++++|||.+|... ..+.+-..++++| |+ +...... ...|+++++-..+|..
T Consensus 287 ~~a~~~~~~~i~~~L~~~gl~~~dId~~v~Hq----an~~i~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~~ 362 (392)
T 3led_A 287 KEVVPLVSEMIIEHAREIGIDPHGLKRMWLHQ----ANINMNEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHK 362 (392)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECS----SCHHHHHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCcEEEEcC----CCHHHHHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHHH
Confidence 34566777899999999999999999888532 1223445677775 75 3222222 2233556666666654
Q ss_pred HHHHHHcCCCCeEEEEee
Q 044359 150 VKDLLKVHKNSLALVLSM 167 (401)
Q Consensus 150 A~~~i~~g~~~~vLvv~~ 167 (401)
+...+ .+.+++|+++.
T Consensus 363 ~~~~~--~~Gd~vll~gf 378 (392)
T 3led_A 363 HQDDM--AQGDLGLICSF 378 (392)
T ss_dssp CCTTC--CTTCEEEEEEE
T ss_pred HhCCC--CCCCEEEEEEE
Confidence 32211 13466776663
No 104
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=88.95 E-value=0.58 Score=45.32 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
...|++++|+++|++++|||.+-+.- ........+.+.||+.
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ve~~d----~f~~~~~~~~~~lg~~ 338 (396)
T 4dd5_A 297 PVPATKKALEAANMTIEDIDLVEANE----AFAAQSVAVIRDLNID 338 (396)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----hHHHHHHHHHHHhCCC
Confidence 36789999999999999999987432 1223344567788876
No 105
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=88.32 E-value=0.71 Score=44.71 Aligned_cols=42 Identities=19% Similarity=0.337 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
...|++++|+++|++++|||.+-..- ........+.+.||+.
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~d----~f~~~~l~~~~~lg~~ 338 (397)
T 1wl4_A 297 PIPAIKQAVTKAGWSLEDVDIFEINE----AFAAVSAAIVKELGLN 338 (397)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECC----SBHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEec----ccHHHHHHHHHHcCCC
Confidence 36899999999999999999887431 1222334477788985
No 106
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=88.04 E-value=1 Score=43.55 Aligned_cols=42 Identities=10% Similarity=0.161 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
...|++++|+++|++++|||.+-.. + .....+-.+.+.||+.
T Consensus 292 ~~~a~~~al~~agl~~~dId~ie~~---d-~f~~~~l~~~~~lg~~ 333 (392)
T 2vu1_A 292 PIPASRKALERAGWKIGDLDLVEAN---E-AFAAQACAVNKDLGWD 333 (392)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEC---C-SBHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec---c-ccHHHHHHHHHHcCCC
Confidence 3679999999999999999988743 1 1222333467889985
No 107
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=88.00 E-value=0.54 Score=45.03 Aligned_cols=81 Identities=21% Similarity=0.245 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHhCC------CCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcce------EEeecccchhHHH
Q 044359 78 TEEVLCTIVKDLLSKHK------INPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKS------INLSGMGCSAGIL 145 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag------~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~------~~i~~~gC~~~~~ 145 (401)
+.+...++++++|+++| ++++|||.+ .... ....-..+.++||+++.... -...|+++++...
T Consensus 265 ~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~----~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~ 339 (374)
T 2h84_A 265 IGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTG----GKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIF 339 (374)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCC----CHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCC----CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHH
Confidence 34556678999999999 999999998 4321 11233468889999754322 1223345555555
Q ss_pred HHHHHHHHHHcC-CCCeEEEEe
Q 044359 146 SISLVKDLLKVH-KNSLALVLS 166 (401)
Q Consensus 146 aL~~A~~~i~~g-~~~~vLvv~ 166 (401)
+|..+ ++.+ +.+++|+++
T Consensus 340 ~L~~~---~~~~~~Gd~vll~~ 358 (374)
T 2h84_A 340 VMDHA---RKSKSLPTYSISLA 358 (374)
T ss_dssp HHHHH---HTCSCCCSEEEEEE
T ss_pred HHHHH---HhhcCCCCeEEEEE
Confidence 55443 3444 467777766
No 108
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=87.00 E-value=1.3 Score=42.71 Aligned_cols=41 Identities=20% Similarity=0.189 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGF 126 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl 126 (401)
...|++++|+++|++++|||.+-..-+ .........+.||+
T Consensus 284 ~~~a~~~al~~agl~~~did~ve~h~~----f~~~~~~~~~~lg~ 324 (387)
T 3goa_A 284 PVPASKLALKKAGLSASDIDVFEMNEA----FAAQILPCIKDLGL 324 (387)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCS----BHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEeCc----chHHHHHHHHHhCC
Confidence 368999999999999999999965421 11233445678888
No 109
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=86.78 E-value=1.2 Score=42.90 Aligned_cols=42 Identities=12% Similarity=0.146 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
...|++++|+++|++++|||.+-..-. .......+.+.||+.
T Consensus 287 ~~~a~~~al~~Agl~~~dId~ve~~d~----f~~~~~~~~~~lg~~ 328 (390)
T 1wdk_C 287 PVPATQKALKRAGLNMADIDFIELNEA----FAAQALPVLKDLKVL 328 (390)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCS----BHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHcCCChhhCcEEEeccC----CHHHHHHHHHHcCCC
Confidence 368999999999999999998864311 111334556778875
No 110
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=86.78 E-value=1.4 Score=47.68 Aligned_cols=78 Identities=8% Similarity=0.050 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceE------EeecccchhHHHHHHH
Q 044359 76 EETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSI------NLSGMGCSAGILSISL 149 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~------~i~~~gC~~~~~aL~~ 149 (401)
+.+.....++++++|+++|++++|||.++.... ...+-..+.++||++.+.... ...|+++++-..+|..
T Consensus 860 ~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~----~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~ 935 (979)
T 3tsy_A 860 TLISENVEKCLTQAFDPLGISDWNSLFWIAHPG----GPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDE 935 (979)
T ss_dssp HHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCS----CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCCcccceEEECCC----ChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHH
Confidence 345566778999999999999999999875431 223456788999998543322 3355788888888888
Q ss_pred HHHHHHcC
Q 044359 150 VKDLLKVH 157 (401)
Q Consensus 150 A~~~i~~g 157 (401)
+..-++.|
T Consensus 936 ~~~~~~~G 943 (979)
T 3tsy_A 936 MRKKSLKG 943 (979)
T ss_dssp HHHHHHHT
T ss_pred HHhhhccc
Confidence 77766555
No 111
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=85.86 E-value=1.3 Score=44.53 Aligned_cols=81 Identities=17% Similarity=0.190 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCc-ceEEee-------cccchhHHHHHHHHHHH
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNI-KSINLS-------GMGCSAGILSISLVKDL 153 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~-~~~~i~-------~~gC~~~~~aL~~A~~~ 153 (401)
...|++++|+++|++++|||.+=... .++.......+.||+..+- ..+.++ ....++++.++--+...
T Consensus 319 ~~~a~~~al~~agl~~~did~~E~~d----AF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~ 394 (520)
T 4egv_A 319 SVTAVNEALRVAGIGLDDVAAFDLYS----CFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNE 394 (520)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEECC----SSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEEeC----CcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHH
Confidence 35789999999999999999875442 3566677788899985321 223332 23355677777777777
Q ss_pred HHcCCCCeEEEEe
Q 044359 154 LKVHKNSLALVLS 166 (401)
Q Consensus 154 i~~g~~~~vLvv~ 166 (401)
|+.+..++.|+.+
T Consensus 395 lr~~~~~~~L~~~ 407 (520)
T 4egv_A 395 MRDKPGQFALVGA 407 (520)
T ss_dssp HHHSTTCEEEEEE
T ss_pred HhcCCCCceEEeC
Confidence 7888888888864
No 112
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=85.20 E-value=2.1 Score=41.46 Aligned_cols=85 Identities=11% Similarity=0.096 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCE----EEEeeecCCCCCcHHHHHHHHcCCCCCcceE------EeecccchhHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDI----LVTNCSIFCPTPSISSMIINKFGFRSNIKSI------NLSGMGCSAGILS 146 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~------~i~~~gC~~~~~a 146 (401)
.+.+...++++++|+++|++++ ||. ++.... ....-..+.++||++++.... ...|+++++...+
T Consensus 287 ~~~~~~~~~i~~~L~~agl~~~-id~~di~~v~Hq~----~~~i~~~~~~~lgl~~~k~~~s~~~l~~~GNt~sAsi~~~ 361 (406)
T 2d3m_A 287 TISNNVEACLIDVFKSVGITPP-EDWNSLFWIPHPG----GRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYI 361 (406)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCC-SSGGGSEEEECCS----CHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCC-CCccceEEEECCC----CHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHH
Confidence 3455667889999999999988 887 654321 122335688899997543332 2334677777777
Q ss_pred HHHHHHHH-HcC-----CC-CeEEEEe
Q 044359 147 ISLVKDLL-KVH-----KN-SLALVLS 166 (401)
Q Consensus 147 L~~A~~~i-~~g-----~~-~~vLvv~ 166 (401)
|..+..-= +.| +. +++|+++
T Consensus 362 L~~~~~~g~~~G~~~~g~~~d~vll~~ 388 (406)
T 2d3m_A 362 LDEMRRKSAAKGLETYGEGLEWGVLLG 388 (406)
T ss_dssp HHHHHHHHHHTTCSBTTTTCSEEEEEE
T ss_pred HHHHHHhccccCCCccCCCcceEEEEE
Confidence 76554332 222 11 6777665
No 113
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=83.70 E-value=0.73 Score=44.64 Aligned_cols=30 Identities=3% Similarity=-0.067 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCcCEEEEee
Q 044359 78 TEEVLCTIVKDLLSKHKINPKSIDILVTNC 107 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s 107 (401)
..+...++.+++|+++|++++|||.+++..
T Consensus 205 ~~~~~~~~~~~~L~~agl~~~did~~~~H~ 234 (396)
T 1xpm_A 205 YIRSFQQSWNEYAKRQGKSLADFASLCFHV 234 (396)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEecC
Confidence 445577899999999999999999998653
No 114
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=82.87 E-value=4.7 Score=32.83 Aligned_cols=54 Identities=11% Similarity=0.233 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeeecC--CCCCcHHHHHHHHcCCCCCcceEEeec
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCSIF--CPTPSISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
+=..+-.++.+++.+++++||-.++|..++| -.+|..+.+ ++|+. +++.++...
T Consensus 51 ~At~ELl~eii~~N~l~~eDIvSv~FTvT~DL~A~FPA~aaR---~~Gw~-~VPLmc~qE 106 (148)
T 1xho_A 51 AETQKLLKEMAEKNGLEEDDIISIIFTVTKDLDAAFPAIAAR---NMGWT-STALMCMNE 106 (148)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEEEECTTCCSSCTHHHHH---HTTCT-TSEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEEEEEeCCccCccChHHHHH---HcCCC-ccchhhccc
Confidence 3344455677888999999999999987765 446764444 67998 788888875
No 115
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=82.33 E-value=1.7 Score=42.30 Aligned_cols=41 Identities=17% Similarity=0.210 Sum_probs=29.7
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
..|+++||+++|++++|||.+=...+ .+.......+.||+.
T Consensus 316 ~~a~~~al~~Agl~~~dId~vE~h~a----f~~~~~~~~~~lg~~ 356 (418)
T 2iik_A 316 AYAIPVALQKAGLTVSDVDIFEINEA----FASQAAYCVEKLRLP 356 (418)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEECCS----BHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCCHHHCCeeeeecc----chHHHHHHHHHcCCC
Confidence 56999999999999999998754321 222344556778885
No 116
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=78.30 E-value=4.5 Score=39.70 Aligned_cols=41 Identities=15% Similarity=0.168 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~ 127 (401)
...|+++||+++|++++|||.+=.. +.+ + ......+.||+.
T Consensus 317 ~~~A~~~Al~~AGl~~~DId~iE~h~aft----~-~~l~~~~~lG~~ 358 (442)
T 2wu9_A 317 PAVAIPAAVKAAGLELDDIDLFEINEAFA----S-QFVYCRNKLGLD 358 (442)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEECCSBH----H-HHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEeCCCh----H-HHHHHHHHhCCC
Confidence 3589999999999999999988543 311 1 222334678885
No 117
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=78.08 E-value=1.9 Score=41.44 Aligned_cols=85 Identities=13% Similarity=0.085 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHh-------CCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEe------ecccchhH
Q 044359 77 ETEEVLCTIVKDLLSK-------HKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINL------SGMGCSAG 143 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~-------ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i------~~~gC~~~ 143 (401)
.+.....++++++|++ +|++++|||.+ ... ..+.+-..++++||++++.....+ .|+++++-
T Consensus 261 ~~~~~~~~~i~~~L~~~~~~l~~~gl~~~did~~--~Hq---~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsi 335 (379)
T 3euo_A 261 LAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA--MHP---GGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATI 335 (379)
T ss_dssp HHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE--ECC---SSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHH
T ss_pred HHHHHHHHHHHHHHHhcCcccccccCChhHeeEE--eCC---CChHHHHHHHHHhCCCHHHHHHHHHHHHhcCccHHHHH
Confidence 3445556777888875 58999999954 221 234456779999999865443322 45777777
Q ss_pred HHHHHHHHH----HHHcC--CCCeEEEEe
Q 044359 144 ILSISLVKD----LLKVH--KNSLALVLS 166 (401)
Q Consensus 144 ~~aL~~A~~----~i~~g--~~~~vLvv~ 166 (401)
..+|..+.. .++.| +.+++|+++
T Consensus 336 ~~~L~~~~~~g~~~l~~Gg~~~d~vll~~ 364 (379)
T 3euo_A 336 FSVLNRLREKDMDALAPGGKVKEYVVGCA 364 (379)
T ss_dssp HHHHHHHTSHHHHTTCGGGCCCSEEEEEE
T ss_pred HHHHHHHHhhcccccCCCCCCCCeEEEEE
Confidence 777776654 23333 236777666
No 118
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=77.91 E-value=5.6 Score=38.52 Aligned_cols=85 Identities=8% Similarity=0.070 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHhCCCC-cCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceE------EeecccchhHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKIN-PKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSI------NLSGMGCSAGILSISL 149 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~-~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~------~i~~~gC~~~~~aL~~ 149 (401)
.+.+...++++++|+++|++ .+|| .++... ....+-..++++||++++.... ...|+++++-..+|..
T Consensus 297 ~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq----~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~ 371 (413)
T 1xes_A 297 LISANIENCMVEAFSQFKISDWNKL-FWVVHP----GGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQ 371 (413)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCGGGS-EEEECC----SCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCccce-eEEECC----CCHHHHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHH
Confidence 34555667889999999998 7777 433221 1223445688999997554332 2344677777777776
Q ss_pred HHHHH-HcC-----C-CCeEEEEe
Q 044359 150 VKDLL-KVH-----K-NSLALVLS 166 (401)
Q Consensus 150 A~~~i-~~g-----~-~~~vLvv~ 166 (401)
+..-- +.| . .+++|+++
T Consensus 372 ~~~~g~~~G~~~~G~~~d~vll~~ 395 (413)
T 1xes_A 372 TRKASLQNGCSTTGEGLEMGVLFG 395 (413)
T ss_dssp HHHHHHHTTCSBTTTTCSEEEEEE
T ss_pred HHHhccccCCCCCCCCcceEEEEE
Confidence 64432 222 1 16777766
No 119
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=77.32 E-value=1.9 Score=42.65 Aligned_cols=85 Identities=13% Similarity=0.080 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHh-------CCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceE--E----eecccchhH
Q 044359 77 ETEEVLCTIVKDLLSK-------HKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSI--N----LSGMGCSAG 143 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~-------ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~--~----i~~~gC~~~ 143 (401)
.+.....++++++|++ +|++++|||.+ ... ..+.+-..++++||+++..... + ..|+++++-
T Consensus 290 ~a~~~v~~~i~~~L~~~g~~L~~agl~~~DId~~--~Hq---an~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASi 364 (465)
T 3e1h_A 290 LAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA--MHP---GGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATI 364 (465)
T ss_dssp HHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE--ECC---SSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHH
T ss_pred HHHHHHHHHHHHHHHhccccccccCCCHHHceEE--ecC---CChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHH
Confidence 3455566777788776 68999999965 221 2344567799999998654322 2 145677777
Q ss_pred HHHHHHHHHH----HHcC--CCCeEEEEe
Q 044359 144 ILSISLVKDL----LKVH--KNSLALVLS 166 (401)
Q Consensus 144 ~~aL~~A~~~----i~~g--~~~~vLvv~ 166 (401)
..+|..+..- ++.| +.+++|+++
T Consensus 365 p~aL~~~~~~~~g~l~~Gg~~~d~vll~g 393 (465)
T 3e1h_A 365 FSVLNRLREKDMDALAPGGKVKEYVVGCA 393 (465)
T ss_dssp HHHHHHHTSTTTTSCSSSSCCCSEEEEEE
T ss_pred HHHHHHHHHhcccccCCCCCCCCEEEEEE
Confidence 7777665432 2222 225666665
No 120
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=76.32 E-value=6.3 Score=38.17 Aligned_cols=85 Identities=8% Similarity=0.122 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHhCCCC-cCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceE------EeecccchhHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKIN-PKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSI------NLSGMGCSAGILSISL 149 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~-~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~------~i~~~gC~~~~~aL~~ 149 (401)
.+.+...++++++|+++|++ .+|| .++... ..+.+-..++++||+++..... ...|+++++-..+|..
T Consensus 292 ~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq----~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~ 366 (413)
T 2p0u_A 292 LITKNIGGFLKDTKNLVGASSWNEL-FWAVHP----GGPAILDQVEAKLELEKGKFQASRDILSDYGNMSSASVLFVLDR 366 (413)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSGGGS-EEEECC----SSHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccce-EEEECC----CCHHHHHHHHHHhCCCHHHHHHHHHHHHHcCcchhhHHHHHHHH
Confidence 34556678899999999998 7777 444322 1223445688999998543322 2334677777777766
Q ss_pred HHHHH-HcC-----CC-CeEEEEe
Q 044359 150 VKDLL-KVH-----KN-SLALVLS 166 (401)
Q Consensus 150 A~~~i-~~g-----~~-~~vLvv~ 166 (401)
+..-- +.| +. +++|+++
T Consensus 367 ~~~~g~~~G~~~~g~~~d~vll~~ 390 (413)
T 2p0u_A 367 VRERSLESNKSTFGEGSEWGFLIG 390 (413)
T ss_dssp HHHHHHHTTCSBTTTTCSEEEEEE
T ss_pred HHHhccccCCcccCCCcceEEEEE
Confidence 64433 222 11 6777665
No 121
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=76.28 E-value=5.7 Score=38.08 Aligned_cols=86 Identities=8% Similarity=0.165 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHhCCCC-cCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceE------EeecccchhHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKIN-PKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSI------NLSGMGCSAGILSISL 149 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~-~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~------~i~~~gC~~~~~aL~~ 149 (401)
.+.+...++++++|+++|++ .++| .++... ....+-..++++||++++.... ...|+++++-..+|..
T Consensus 274 ~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq----~~~~i~~~~~~~lgl~~ek~~~~~~~l~~~GNtssAsi~~~L~~ 348 (389)
T 1i88_A 274 IVSKNITKALVEAFEPLGISDYNSI-FWIAHP----GGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDE 348 (389)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCTTSS-EEEECC----SCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCchhhc-eEEECC----CcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHH
Confidence 34555668889999999997 7777 544322 1223445688999997543332 2334677777777776
Q ss_pred HHHHH-HcC-----CC-CeEEEEee
Q 044359 150 VKDLL-KVH-----KN-SLALVLSM 167 (401)
Q Consensus 150 A~~~i-~~g-----~~-~~vLvv~~ 167 (401)
+..-= +.| +. +++|+++.
T Consensus 349 ~~~~g~~~G~~~~g~~~d~vll~~f 373 (389)
T 1i88_A 349 MRKKSTQNGLKTTGEGLEWGVLFGF 373 (389)
T ss_dssp HHHHHHHTTCSBTTTTCSEEEEEEE
T ss_pred HHHhccccCCcccCCCCceEEEEEe
Confidence 64432 222 11 67777763
No 122
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=75.84 E-value=6.7 Score=37.79 Aligned_cols=85 Identities=9% Similarity=0.085 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHhCCCC-cCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceE------EeecccchhHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKIN-PKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSI------NLSGMGCSAGILSISL 149 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~-~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~------~i~~~gC~~~~~aL~~ 149 (401)
.+.+...++++++|+++|++ .+|| .++... ....+-..++++||++++.... ...|+++++-..+|..
T Consensus 279 ~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq----~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~ 353 (402)
T 1ee0_A 279 MVAKNIENAAEKALSPLGITDWNSV-FWMVHP----GGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDE 353 (402)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCGGGS-EEEECC----SSHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCccccc-eEEECC----CCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCchhhHHHHHHHH
Confidence 34555668899999999998 7777 444322 1223445688999997543332 2334677777777766
Q ss_pred HHHHH-HcC-----CC-CeEEEEe
Q 044359 150 VKDLL-KVH-----KN-SLALVLS 166 (401)
Q Consensus 150 A~~~i-~~g-----~~-~~vLvv~ 166 (401)
+..-- +.| .. +++|+++
T Consensus 354 ~~~~g~~~G~~~~G~~~d~vll~~ 377 (402)
T 1ee0_A 354 VRKRSMAEGKSTTGEGLDCGVLFG 377 (402)
T ss_dssp HHHHHHHTTCSBTBTTBSEEEEEE
T ss_pred HHHhccccCCCCCCCCcceEEEEE
Confidence 64432 222 11 6777766
No 123
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=75.37 E-value=1.5 Score=42.99 Aligned_cols=90 Identities=8% Similarity=0.011 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEee-ecC-------CCCC-cHHHHHHHHcCCCCCcc---eEEeecccchhHH
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNC-SIF-------CPTP-SISSMIINKFGFRSNIK---SINLSGMGCSAGI 144 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~-------~~~p-~~a~~l~~~LGl~~~~~---~~~i~~~gC~~~~ 144 (401)
...+...++++++|+++|++++|||.+++.. ... .... .....++++||++.... .-.+.|+++++-.
T Consensus 238 ~~~~~l~~~~~~~l~~~gl~~~Did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~~l~~~~e~~~~~~~~~GNt~sASi~ 317 (425)
T 3sqz_A 238 QYLDMLKTTWAEYQKRFDVSLTDFAAFCFHLPFPKLALKGFNKIMDKQVPSDLQEKLKVNFEASILYSKQIGNIYTGSLF 317 (425)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHHHCCTTSCHHHHHHHHHHHHHHHTTHHHHBCCGGGHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCCEEEECCCcchhHHHHHHHHHhccchHHHHHHhCCCHHHHhhHHhccCccHHHHHH
Confidence 4456677899999999999999999998754 100 0000 00124566666642211 1123345666666
Q ss_pred HHHHHHHHHH-HcCCCCeEEEEe
Q 044359 145 LSISLVKDLL-KVHKNSLALVLS 166 (401)
Q Consensus 145 ~aL~~A~~~i-~~g~~~~vLvv~ 166 (401)
.+|..+..-- +..+.+++|+++
T Consensus 318 l~L~~~l~~~g~l~~Gd~ill~s 340 (425)
T 3sqz_A 318 LGLLSLLENSQNLVAGDKIALFS 340 (425)
T ss_dssp HHHHHHHHHCSSCCTTCEEEEEE
T ss_pred HHHHHHHHhcCCCCCCCEEEEEc
Confidence 6654433320 012346666655
No 124
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=75.16 E-value=7.2 Score=37.58 Aligned_cols=86 Identities=10% Similarity=0.215 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHhCCCC-cCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceE------EeecccchhHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKIN-PKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSI------NLSGMGCSAGILSISL 149 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~-~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~------~i~~~gC~~~~~aL~~ 149 (401)
.+.+...++++++|+++|++ .++| .++... .....-..++++||++++.... ...|+++++-..+|..
T Consensus 287 ~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq----~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~ 361 (402)
T 3awk_A 287 LISKNIDKVLAEPLEYVHFPSYNDM-FWAVHP----GGPAILDQIEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQ 361 (402)
T ss_dssp HHHHHHHHHTHHHHHHTTCCCGGGE-EEEECC----SCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCccce-eEEECC----CcHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHH
Confidence 34555667889999999997 6665 333221 1223445688999998554332 2334677777777776
Q ss_pred HHHHH-HcC-----CC-CeEEEEee
Q 044359 150 VKDLL-KVH-----KN-SLALVLSM 167 (401)
Q Consensus 150 A~~~i-~~g-----~~-~~vLvv~~ 167 (401)
+..-- +.| +. +++|+++.
T Consensus 362 ~~~~g~~~G~~~~g~g~d~vll~~f 386 (402)
T 3awk_A 362 IRKNSEELHLPTTGEGFEWGFVIGF 386 (402)
T ss_dssp HHHHHHHTTCSBTTTTCSEEEEEEE
T ss_pred HHhhccccCCCcCCCCcceEEEEEe
Confidence 64432 222 11 67777763
No 125
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=75.13 E-value=1.4 Score=42.51 Aligned_cols=31 Identities=6% Similarity=0.068 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEee
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNC 107 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s 107 (401)
...+...++.+++|+++|++++|||.+++..
T Consensus 209 ~~~~~~~~~~~~~l~~~g~~~~did~~v~Hq 239 (388)
T 3v4n_A 209 TYIQSFAQVWDEHKKRTGLDFADYDALAFHI 239 (388)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCCEEEeCC
Confidence 3456777899999999999999999998654
No 126
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=74.93 E-value=1.4 Score=42.96 Aligned_cols=76 Identities=13% Similarity=0.074 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCCCCcceEEee-------cccchhHHHHHHHHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFRSNIKSINLS-------GMGCSAGILSISLVK 151 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~-------~~gC~~~~~aL~~A~ 151 (401)
.-..+|++++|+++|++++|||.+... |.+....+.....+.+.+|... ..+.++ ...+++|+..+-.+.
T Consensus 292 ~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~ 369 (427)
T 3ho9_A 292 AGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSI 369 (427)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGG--GTSEEECTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCcCHHHHHHHHHHhcccC--CCeEEecchHhhccCHHHHHHHHHHHHH
Confidence 345688999999999999999999854 4332222334455667777531 112222 234456666666666
Q ss_pred HHHHcC
Q 044359 152 DLLKVH 157 (401)
Q Consensus 152 ~~i~~g 157 (401)
..++.+
T Consensus 370 ~~l~~~ 375 (427)
T 3ho9_A 370 LALRDQ 375 (427)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 666655
No 127
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=74.49 E-value=6.4 Score=37.69 Aligned_cols=85 Identities=11% Similarity=0.195 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHhCCCC-cCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceE------EeecccchhHHHHHHH
Q 044359 77 ETEEVLCTIVKDLLSKHKIN-PKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSI------NLSGMGCSAGILSISL 149 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~-~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~------~i~~~gC~~~~~aL~~ 149 (401)
.+.+...++++++|+++|++ .++| .++.... ....-..++++||++++.... ...|+++++-..+|..
T Consensus 270 ~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~----~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~ 344 (387)
T 3a5r_A 270 LISNNIKTCLSDAFTPLNISDWNSL-FWIAHPG----GPAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDE 344 (387)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCS----CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCChhhe-eEEECCC----CHHHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHH
Confidence 34556668899999999998 8887 4433221 223445688899997543322 2334677777777766
Q ss_pred HHHHH-HcC-----CC-CeEEEEe
Q 044359 150 VKDLL-KVH-----KN-SLALVLS 166 (401)
Q Consensus 150 A~~~i-~~g-----~~-~~vLvv~ 166 (401)
+..-- +.| .. +++|+++
T Consensus 345 ~~~~g~~~G~~~~G~~~d~vll~~ 368 (387)
T 3a5r_A 345 MRKKSLENGQATTGEGLEWGVLFG 368 (387)
T ss_dssp HHHHHHHTTCSBTTTTCSEEEEEE
T ss_pred HHHhccccCCCCCCCCcceEEEEE
Confidence 64432 222 11 6777776
No 128
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=73.54 E-value=5.3 Score=37.23 Aligned_cols=81 Identities=9% Similarity=0.040 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEee---cccchhHHHHHHHHHHHHH
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLS---GMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~---~~gC~~~~~aL~~A~~~i~ 155 (401)
...+.+...+++++. ++++|||+++... ..+..-..++++||++++.....+. |+++++-..+|.. +++
T Consensus 220 ~~~~~~~~~~~i~~~-l~~~did~~v~Hq----~~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~---~~~ 291 (321)
T 3il6_A 220 FDFAIKDVSQNILSL-VTDETVDYLLLHQ----ANVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDE---AVE 291 (321)
T ss_dssp HHHHHHHHHHHHHTT-CCGGGCSEEEECC----SCHHHHHHHHHHHTCCGGGBCCCGGGTCBCGGGHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHH-cCcccCCEEEEcC----CCHHHHHHHHHHcCcCHHHhhhhHhhcccHHHHHHHHHHHH---HHH
Confidence 334444444444443 2389999998643 1233456789999998554433332 2444444444443 344
Q ss_pred cC---CC--CeEEEEee
Q 044359 156 VH---KN--SLALVLSM 167 (401)
Q Consensus 156 ~g---~~--~~vLvv~~ 167 (401)
.| +. +++|+++.
T Consensus 292 ~g~~~~G~~d~vll~~f 308 (321)
T 3il6_A 292 NGTLILGSQQRVVLTGF 308 (321)
T ss_dssp TTSSCTTSCCEEEEEEE
T ss_pred hCCCCCCCCCEEEEEEE
Confidence 43 35 77887773
No 129
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=73.08 E-value=4.1 Score=39.24 Aligned_cols=84 Identities=11% Similarity=0.114 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHhCCCCc-CCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceE------EeecccchhHHHHHHHH
Q 044359 78 TEEVLCTIVKDLLSKHKINP-KSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSI------NLSGMGCSAGILSISLV 150 (401)
Q Consensus 78 ~~~la~~Aa~~aL~~ag~~~-~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~------~i~~~gC~~~~~aL~~A 150 (401)
+.....++++++|+++|+++ +|| .++... ..+.+-..++++||++++.... ...|+++++-..+|..+
T Consensus 275 ~~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq----~n~~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~ 349 (393)
T 3ov2_A 275 IADNLGRSLERALAPLGVREWNDV-FWVAHP----GNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDEL 349 (393)
T ss_dssp HHTTSHHHHHHHHGGGTCCSGGGS-EEEECC----CCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcccCc-EEEECC----CChHHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHH
Confidence 44455678999999999997 777 543322 2334557799999998654433 23446777777777666
Q ss_pred HHH-HHcCC---C---CeEEEEe
Q 044359 151 KDL-LKVHK---N---SLALVLS 166 (401)
Q Consensus 151 ~~~-i~~g~---~---~~vLvv~ 166 (401)
..- ++.|. + +++|+++
T Consensus 350 ~~~~~~~g~~~~G~~~d~vll~~ 372 (393)
T 3ov2_A 350 RKRSAVEGRSTTGDGLQWGVLLG 372 (393)
T ss_dssp HHHHHHTTCSBTTTTCSEEEEEE
T ss_pred HHhhhhcCCcCCCCCCCeEEEEE
Confidence 543 33342 3 6777766
No 130
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=72.46 E-value=6.9 Score=38.57 Aligned_cols=38 Identities=5% Similarity=0.226 Sum_probs=26.6
Q ss_pred HHHHHHh----CCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 86 VKDLLSK----HKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 86 a~~aL~~----ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
++++|++ +|++++|||.+|+.. +..-+...++++||++
T Consensus 229 ~~~~l~~~~~~~gl~~~did~~v~Hq----an~rii~~~~~rL~~~ 270 (460)
T 2v4w_A 229 IQNQWKQAGSDRPFTLDDLQYMIFHT----PFCKMVQKSLARLMFN 270 (460)
T ss_dssp HHHHHHHTTCCCCCCGGGCSEEEECC----SSHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccccCCCHHHhceEeecC----CchHHHHHHHHHcCCC
Confidence 7788888 899999999999754 1222444555566654
No 131
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=71.52 E-value=4.1 Score=39.70 Aligned_cols=74 Identities=15% Similarity=0.111 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCCCCcceEEeec-------ccchhHHHHHHHHHH
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFRSNIKSINLSG-------MGCSAGILSISLVKD 152 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~-------~gC~~~~~aL~~A~~ 152 (401)
-..++++++|+++|++++|||.+... +.+ ...+.....+.+.+|... ..+.+++ ..+++++..+-.+..
T Consensus 294 ~~~~ai~~al~~Agl~~~dId~ve~HgtgT-~~d~~e~~al~~~~g~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~~ 370 (428)
T 3kzu_A 294 GAQRCMVAALKRAGIVPDEIDYINAHGTST-MADTIELGAVERVVGEAA--AKISMSSTKSSIGHLLGAAGAAEAVFSTL 370 (428)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSS-TTHHHHHHHHHHHHGGGG--GGCEEECTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHeeEEEecCCcc-hhhHHHHHHHHHHhccCC--CceeeCCchhhhCCCchhhHHHHHHHHHH
Confidence 45689999999999999999999743 433 333334455666677642 2233331 224455555555555
Q ss_pred HHHcC
Q 044359 153 LLKVH 157 (401)
Q Consensus 153 ~i~~g 157 (401)
.++.+
T Consensus 371 ~l~~~ 375 (428)
T 3kzu_A 371 AIRDN 375 (428)
T ss_dssp HHHHT
T ss_pred HhccC
Confidence 55554
No 132
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=70.43 E-value=5.5 Score=38.32 Aligned_cols=41 Identities=20% Similarity=0.277 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~ 127 (401)
...|+++||+++|++++|||.+=.. +.+ .......+.||+.
T Consensus 295 ~~~a~~~al~~Agl~~~dId~ve~h~~ft-----~~~l~~~~~lg~~ 336 (393)
T 1afw_A 295 PAYAIPKVLEATGLQVQDIDIFEINEAFA-----AQALYCIHKLGID 336 (393)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSBH-----HHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEeccCH-----HHHHHHHHHhCCC
Confidence 3689999999999999999988543 211 1223344678885
No 133
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=68.24 E-value=4.3 Score=35.65 Aligned_cols=58 Identities=17% Similarity=0.198 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC-cHHHHHHHHcCCCCCcceEEeec
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP-SISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p-~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
+.-...++++|+++|++++|||.|.++..|+.+.. -++...++-|.+..+++.+.|+.
T Consensus 37 ~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~~iPl~gVst 95 (213)
T 3r6m_A 37 KKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVST 95 (213)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEEEH
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 33457889999999999999999999887764321 12233344333323456777774
No 134
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=67.57 E-value=4.5 Score=35.89 Aligned_cols=58 Identities=19% Similarity=0.187 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC-cHHHHHHHHcCCCCCcceEEeec
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP-SISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p-~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
+.-..+++++|+++|++++|||.|.++..|+.+.. -.+...++.|.+..+++.+.|+.
T Consensus 36 ~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRig~~~ak~la~~~~~Pl~~V~~ 94 (231)
T 2gel_A 36 QRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGVST 94 (231)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHHTTTCCEEEECH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHHHHHHHHHHHHHcCCCEEEecc
Confidence 34568899999999999999999999877653311 12233344443333466777763
No 135
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=66.61 E-value=1.8 Score=41.85 Aligned_cols=78 Identities=13% Similarity=0.078 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCCC-CcceEE----eecccchhHHHHHHHHHHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFRS-NIKSIN----LSGMGCSAGILSISLVKDL 153 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~~-~~~~~~----i~~~gC~~~~~aL~~A~~~ 153 (401)
.-..++++++|+++|++++|||.+... +.+..--+.....+.+.+|.+. .+..-. +.+..+++++..+-.+...
T Consensus 275 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~ 354 (408)
T 1j3n_A 275 KGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQA 354 (408)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHH
Confidence 345688999999999999999998754 3221101122344556666531 121111 2224455566666666666
Q ss_pred HHcC
Q 044359 154 LKVH 157 (401)
Q Consensus 154 i~~g 157 (401)
++.+
T Consensus 355 l~~~ 358 (408)
T 1j3n_A 355 LYHG 358 (408)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 6655
No 136
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=65.78 E-value=18 Score=28.71 Aligned_cols=52 Identities=6% Similarity=0.234 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecC--CCCCcHHHHHHHHc-CCCCCcceEEeec
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIF--CPTPSISSMIINKF-GFRSNIKSINLSG 137 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~l~~~L-Gl~~~~~~~~i~~ 137 (401)
..+-.++.+++.+++++||-.++|+.++| ..+|..+. +++ |+. +++.++...
T Consensus 24 t~eLl~~i~~~N~l~~~dIvSv~FT~T~DL~a~FPA~aa---R~~~gw~-~VpL~c~qE 78 (127)
T 1dbf_A 24 TKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAV---RELSGWQ-YVPVTCMQE 78 (127)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEEEEECTTCCSSCTHHHH---HTSTTCT-TSCEEEEEC
T ss_pred HHHHHHHHHHHcCCCHHHEEEEEEEeCCccCccChHHHH---hccCCCC-ccchhhccc
Confidence 34445677788999999999999987765 44676444 467 887 788888875
No 137
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=65.59 E-value=3.3 Score=36.55 Aligned_cols=58 Identities=19% Similarity=0.177 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC-cHHHHHHHHcCCCCCcceEEeec
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP-SISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p-~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
+.....++++|+++|++++|||.|.++..|+.+.+ -++...++-|.+..+++.+.|+.
T Consensus 47 e~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTGlRiG~~~Ak~La~~~~iPl~gVs~ 105 (218)
T 2a6a_A 47 EILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLTGLRVGIATVVGLVSPYDIPVAPLNS 105 (218)
T ss_dssp GHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHGGGTCCEEEECH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchHhHHHHHHHHHHHHHHcCCCEEEeCc
Confidence 34457889999999999999999999887764332 12333444444433567777774
No 138
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=65.53 E-value=19 Score=28.33 Aligned_cols=52 Identities=8% Similarity=0.195 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhCCCCc-CCcCEEEEeeecC--CCCCcHHHHHHHHcCCCCCcceEEeec
Q 044359 82 LCTIVKDLLSKHKINP-KSIDILVTNCSIF--CPTPSISSMIINKFGFRSNIKSINLSG 137 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~-~dId~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~i~~ 137 (401)
..+-.++.+++.++++ +||-.++|+.++| -..|..+ ++++|+. +++.++...
T Consensus 23 t~eLl~~i~~~N~l~~~~divSv~FT~T~DL~a~FPA~a---aR~~g~~-~VpL~c~qE 77 (122)
T 1ufy_A 23 TRELLLKMLEANGIQSYEELAAVIFTVTEDLTSAFPAEA---ARQIGMH-RVPLLSARE 77 (122)
T ss_dssp HHHHHHHHHHHHTCCCGGGEEEEEEEECTTCCSCCHHHH---HHHTTGG-GSCEEEEEC
T ss_pred HHHHHHHHHHhcCCCChHhEEEEEEEeCCccCccChHHH---HHHcCCC-ccchhhccc
Confidence 3444566778899999 9999999987775 3456544 4467998 788888875
No 139
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=63.00 E-value=11 Score=35.29 Aligned_cols=32 Identities=28% Similarity=0.283 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeeecCC
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCSIFC 111 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~ 111 (401)
+.-..+++++|+++|++++|||.|.++..|+.
T Consensus 54 ~~l~~~i~~~L~~ag~~~~did~Iav~~gPG~ 85 (334)
T 3eno_A 54 EVIDTVISRALEKAKISIHDIDLIGFSMGPGL 85 (334)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSSSC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCC
Confidence 34468999999999999999999998766653
No 140
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=62.29 E-value=6.2 Score=37.87 Aligned_cols=42 Identities=10% Similarity=0.025 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
...|++++|+++|++++|||.+-..- .....+-...+.||+.
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~D----~f~~~~l~~~e~lg~~ 338 (395)
T 2ib8_A 297 PVYAASMVLKDVGLKKEDIAMWEVNE----AFSLVVLANIKMLEID 338 (395)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEECC----SBHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEcc----ccHHHHHHHHHHcCCC
Confidence 46799999999999999999887331 1222233344558986
No 141
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=61.64 E-value=11 Score=35.97 Aligned_cols=84 Identities=7% Similarity=0.116 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHhC----CCCcCCcC--EEEEeeecCCCCCcHHHHHHHHcCCCCCcceE------EeecccchhHH
Q 044359 77 ETEEVLCTIVKDLLSKH----KINPKSID--ILVTNCSIFCPTPSISSMIINKFGFRSNIKSI------NLSGMGCSAGI 144 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~a----g~~~~dId--~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~------~i~~~gC~~~~ 144 (401)
.+.+...++++++|+++ |++ |+| .+|... ..+.+-..++++||+++..... ...|+++++-.
T Consensus 267 ~~~~~~~~~~~~~L~~~~~~~gl~--d~d~~~~v~Hq----~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip 340 (387)
T 3oit_A 267 LIGDNVERCLLDMFGPLLGGDGGG--GWNDLFWAVHP----GSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVI 340 (387)
T ss_dssp HHHHHHHHHHHHHTGGGCC--------GGGSEEEECC----CCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHH
T ss_pred HHHHHHHHHHHHHHHhhcccCCCC--cccccEEEECC----CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHH
Confidence 34455567888888888 887 565 443221 2334557799999998654433 23446666666
Q ss_pred HHHHHHHHH-HHcCC----CCeEEEEe
Q 044359 145 LSISLVKDL-LKVHK----NSLALVLS 166 (401)
Q Consensus 145 ~aL~~A~~~-i~~g~----~~~vLvv~ 166 (401)
.+|..+..- ++.|. .+++|+++
T Consensus 341 ~~L~~~~~~~~~~G~~g~~~d~vll~~ 367 (387)
T 3oit_A 341 FALDELRRQRKEAAAAGEWPELGVMMA 367 (387)
T ss_dssp HHHHHHHHC----------CCEEEEEE
T ss_pred HHHHHHHHhhhccCCCCCCCCEEEEEE
Confidence 667655332 22231 15666665
No 142
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=61.18 E-value=4.4 Score=39.62 Aligned_cols=78 Identities=17% Similarity=0.124 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCCC-CcceEE----eecccchhHHHHHHHHHHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFRS-NIKSIN----LSGMGCSAGILSISLVKDL 153 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~~-~~~~~~----i~~~gC~~~~~aL~~A~~~ 153 (401)
.-..++++++|+++|++++|||.+... +.+..--+.-...+...+|... .++.-. +....+++++..+-.+...
T Consensus 301 ~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~ 380 (437)
T 2gqd_A 301 EGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALS 380 (437)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHH
Confidence 345689999999999999999999753 3221111223344556666421 122111 1113344555555555555
Q ss_pred HHcC
Q 044359 154 LKVH 157 (401)
Q Consensus 154 i~~g 157 (401)
++.+
T Consensus 381 l~~~ 384 (437)
T 2gqd_A 381 IKDS 384 (437)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 5554
No 143
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=60.92 E-value=4.2 Score=39.43 Aligned_cols=78 Identities=10% Similarity=0.055 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCCC-CcceEE----eecccchhHHHHHHHHHHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFRS-NIKSIN----LSGMGCSAGILSISLVKDL 153 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~~-~~~~~~----i~~~gC~~~~~aL~~A~~~ 153 (401)
.-..++++++|+++|++++|||.+... +.+..-.+.-...+.+.+|... .++.-. +.....++++..+-.+...
T Consensus 281 ~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~ 360 (416)
T 1e5m_A 281 RGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMA 360 (416)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHH
Confidence 345789999999999999999999854 3221101222334555565421 111111 1112344555555555556
Q ss_pred HHcC
Q 044359 154 LKVH 157 (401)
Q Consensus 154 i~~g 157 (401)
++.+
T Consensus 361 l~~~ 364 (416)
T 1e5m_A 361 IAED 364 (416)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 6654
No 144
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=60.54 E-value=4.4 Score=39.35 Aligned_cols=77 Identities=10% Similarity=0.075 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCCC-CcceEE----eecccchhHHHHHHHHHHHH
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFRS-NIKSIN----LSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~~-~~~~~~----i~~~gC~~~~~aL~~A~~~i 154 (401)
-..++++++|+++|++++|||.+... +.+..--+.-...+.+.+|... .++.-. +....+++++..+-.+...+
T Consensus 284 ~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l 363 (424)
T 1tqy_A 284 EMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLAL 363 (424)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHH
Confidence 45689999999999999999999754 3221101122334555555321 122111 12234455666666666666
Q ss_pred HcC
Q 044359 155 KVH 157 (401)
Q Consensus 155 ~~g 157 (401)
+.+
T Consensus 364 ~~~ 366 (424)
T 1tqy_A 364 EHG 366 (424)
T ss_dssp HHC
T ss_pred HcC
Confidence 655
No 145
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=59.18 E-value=27 Score=33.78 Aligned_cols=77 Identities=13% Similarity=0.116 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHH------hCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcC--CCCCcc-----eEEeecccchhHHHH
Q 044359 80 EVLCTIVKDLLS------KHKINPKSIDILVTNCSIFCPTPSISSMIINKFG--FRSNIK-----SINLSGMGCSAGILS 146 (401)
Q Consensus 80 ~la~~Aa~~aL~------~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LG--l~~~~~-----~~~i~~~gC~~~~~a 146 (401)
.-..++++++|+ ++|++ ||+++... ..+.+-..++++|| +++... .++..|+++++-..+
T Consensus 307 ~~~~~~i~~~L~~~~~~~~~gl~---id~~v~Hq----~~~~il~~v~~~Lg~~l~~ek~~~s~~~l~~GNtssAsi~~~ 379 (413)
T 3v7i_A 307 QETVTAMWEWLRVRYEDDPSSWH---PDVLLAHP----GGTRVLEYMEQTMPDEWPSGLLSYSRDSYTSGNRGGAAVFDI 379 (413)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTCC---CCEEEEEC----SSHHHHHHHHHHSCSSCCSCSTHHHHHHHTTCBCGGGHHHHH
T ss_pred HHHHHHHHHHHhhccccccCCCc---eeEEEECC----CChHHHHHHHHHhCCCCCHHHhhccceEeceeChHHHHHHHH
Confidence 335688999999 88887 99877543 13345577999999 975543 333334555666666
Q ss_pred HHHHHHHHHc--CCCCeEEEEe
Q 044359 147 ISLVKDLLKV--HKNSLALVLS 166 (401)
Q Consensus 147 L~~A~~~i~~--g~~~~vLvv~ 166 (401)
|..+. +. .+++++|+++
T Consensus 380 L~~~~---~~~~~~Gd~vll~~ 398 (413)
T 3v7i_A 380 LRRAH---DAGQKTGSRAVLYA 398 (413)
T ss_dssp HHHHH---HHCCCTTCEEEEEE
T ss_pred HHHHH---hCCCCCCCEEEEEE
Confidence 65544 32 2457777776
No 146
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=55.34 E-value=4.9 Score=39.42 Aligned_cols=77 Identities=13% Similarity=0.077 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCCCCcceEE----eecccchhHHHHHHHHHHHHH
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFRSNIKSIN----LSGMGCSAGILSISLVKDLLK 155 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~~~~~~~~----i~~~gC~~~~~aL~~A~~~i~ 155 (401)
-..+|++++|+++|++++|||.+... +.+....+.-...+.+.+|-...++.-. +....+++++..+-.+...++
T Consensus 309 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~d~~E~~al~~~~~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~ 388 (451)
T 4ddo_A 309 GAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILALR 388 (451)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHCSSSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEecCCcCcccCHHHHHHHHHHhCCCCCCcccCchhhhccCHHHHHHHHHHHHHHHHh
Confidence 45689999999999999999999754 3221111222334555555421222111 111233445555555555555
Q ss_pred cC
Q 044359 156 VH 157 (401)
Q Consensus 156 ~g 157 (401)
.+
T Consensus 389 ~~ 390 (451)
T 4ddo_A 389 DG 390 (451)
T ss_dssp HT
T ss_pred cC
Confidence 54
No 147
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=52.81 E-value=3.3 Score=40.06 Aligned_cols=26 Identities=12% Similarity=0.239 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEe
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTN 106 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~ 106 (401)
-..++++++|+++|++++|||.+...
T Consensus 278 ~~~~a~~~al~~agl~~~dId~ve~H 303 (413)
T 3o04_A 278 GAARAMKMAIDDAGLTPDKVDYINAH 303 (413)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEEe
Confidence 45689999999999999999999853
No 148
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=52.74 E-value=4.3 Score=39.27 Aligned_cols=75 Identities=13% Similarity=0.154 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCCCCcceEE----eecccchhHHHHHHHHHHHHHc
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFRSNIKSIN----LSGMGCSAGILSISLVKDLLKV 156 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~~~~~~~~----i~~~gC~~~~~aL~~A~~~i~~ 156 (401)
..++++++|+++|++++|||.+... |.+..--+.-...+...+|-. .++.-. +.....++++..+-.+...++.
T Consensus 281 ~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~-~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~ 359 (415)
T 1tqy_B 281 LERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGRE-GVPVTVPKTTTGRLYSGGGPLDVVTALMSLRE 359 (415)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHHHHHHHHCTT-CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHHHHHHHhCCC-CceEeccchhhccChHHHHHHHHHHHHHHHhc
Confidence 4588999999999999999999754 322111122233345555532 121111 1112334455555555555555
Q ss_pred C
Q 044359 157 H 157 (401)
Q Consensus 157 g 157 (401)
+
T Consensus 360 ~ 360 (415)
T 1tqy_B 360 G 360 (415)
T ss_dssp T
T ss_pred C
Confidence 4
No 149
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=52.70 E-value=18 Score=35.37 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=26.9
Q ss_pred HHHHHHHHHHH------hCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcC
Q 044359 81 VLCTIVKDLLS------KHKINPKSIDILVTNCSIFCPTPSISSMIINKFG 125 (401)
Q Consensus 81 la~~Aa~~aL~------~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LG 125 (401)
...++.+.+|+ ++|++++|||.+++... ...+...+.++||
T Consensus 215 ~l~~~~~~~l~~~~~~~~agl~~~did~~v~Hq~----~~~i~~~~~~~L~ 261 (450)
T 2f82_A 215 ALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSP----YNKLVQKSFARLL 261 (450)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCGGGCSEEEECCS----SHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccCCChhhcCEEEecCC----hHHHHHHHHHHhc
Confidence 33466777775 89999999999986542 2223344556665
No 150
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=49.76 E-value=8.2 Score=37.63 Aligned_cols=27 Identities=15% Similarity=0.220 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN 106 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~ 106 (401)
.-..++++++|+++|++++|||.+...
T Consensus 301 ~~~~~ai~~Al~~Agl~p~dId~ve~H 327 (438)
T 2iwz_A 301 EGALRCMAAALKDAGVQPEEISYINAH 327 (438)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEec
Confidence 345789999999999999999998754
No 151
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=49.52 E-value=6.1 Score=38.59 Aligned_cols=27 Identities=15% Similarity=0.192 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN 106 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~ 106 (401)
.-..++++++|+++|++++|||.+...
T Consensus 302 ~~~~~ai~~al~~Agl~~~dId~ve~H 328 (434)
T 2gp6_A 302 ERAGHAITRAIQLAGLAPGDIDHVNAH 328 (434)
T ss_dssp HHHHHHHHHHHHHTTCCTTTEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEe
Confidence 345689999999999999999998754
No 152
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=49.40 E-value=4.4 Score=39.48 Aligned_cols=27 Identities=15% Similarity=0.222 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN 106 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~ 106 (401)
.-..++++++|+++|++++|||.+...
T Consensus 294 ~~~~~ai~~al~~agl~~~dId~ve~H 320 (431)
T 2ix4_A 294 KGAVLAMTRALRQSGLCPNQIDYVNAH 320 (431)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEe
Confidence 345789999999999999999998754
No 153
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=49.35 E-value=17 Score=34.57 Aligned_cols=52 Identities=12% Similarity=0.250 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC--------cHHHHHHHHcCCC
Q 044359 76 EETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP--------SISSMIINKFGFR 127 (401)
Q Consensus 76 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p--------~~a~~l~~~LGl~ 127 (401)
..-..+-.+|++++|+++++++++||.|-+...+-+..| +....|+++.|++
T Consensus 64 ~~lg~~~a~av~~~l~~~~~~~~~Id~IGsHGQTv~H~P~~~~TlQiGd~~~iA~~Tgi~ 123 (371)
T 3qbx_A 64 QRWVALAAQGVRELLLQQQMSPDEVRAIGSHGQTIRHEPARHFTVQIGNPALLAELTGID 123 (371)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCEEEEEEGGGTEEEEECCHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccccEEEeCCccCccCCCCCCeeecCCHHHHHHHHCcC
Confidence 344567789999999999999999999865432211122 3568899999985
No 154
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=48.80 E-value=9.9 Score=36.92 Aligned_cols=76 Identities=13% Similarity=0.158 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCCCCcceEE----eecccchhHHHHHHHHHHHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFRSNIKSIN----LSGMGCSAGILSISLVKDLL 154 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~~~~~~~~----i~~~gC~~~~~aL~~A~~~i 154 (401)
.-..++++++|+++|++++|||.+... +.+...-+.-...+.+.+|-+ ++.-. +....+++++..+-.+...+
T Consensus 296 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~--~~v~s~k~~~GH~~gAaG~~~~i~~~~~l 373 (430)
T 1ox0_A 296 QGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKE--VPVSSTKSFTGHLLGAAGAVEAIVTIEAM 373 (430)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCSS--SEEECTHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHHHHhCCC--ceecccccccccchhhHHHHHHHHHHHHH
Confidence 345689999999999999999999754 322111122233455556531 21111 12234555666666666666
Q ss_pred HcC
Q 044359 155 KVH 157 (401)
Q Consensus 155 ~~g 157 (401)
+.+
T Consensus 374 ~~~ 376 (430)
T 1ox0_A 374 RHN 376 (430)
T ss_dssp HHT
T ss_pred hcC
Confidence 654
No 155
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=48.38 E-value=9.2 Score=41.19 Aligned_cols=78 Identities=13% Similarity=0.227 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCCCC-cceEEee-------cccchhHHHHHHHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFRSN-IKSINLS-------GMGCSAGILSISLV 150 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~~~-~~~~~i~-------~~gC~~~~~aL~~A 150 (401)
.-..++++++|+++|++|+|||.+... |.+..--|.-...+.+.+|.... .....+. ....++|+.+|-.+
T Consensus 286 ~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~ 365 (915)
T 2qo3_A 286 PAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKV 365 (915)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHH
Confidence 455789999999999999999999754 43333334455667778875321 1223332 13345666666666
Q ss_pred HHHHHcC
Q 044359 151 KDLLKVH 157 (401)
Q Consensus 151 ~~~i~~g 157 (401)
...++.+
T Consensus 366 ~l~L~~~ 372 (915)
T 2qo3_A 366 VLALRNG 372 (915)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 6666654
No 156
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=44.65 E-value=26 Score=32.56 Aligned_cols=31 Identities=13% Similarity=0.224 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeeecC
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCSIF 110 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~ 110 (401)
+....+++++|+++|++++|||.|.++..|+
T Consensus 49 ~~l~~~i~~~L~~agi~~~did~Ia~~~GPG 79 (330)
T 2ivn_A 49 RLMKPLLRKALSEAGVSLDDIDVIAFSQGPG 79 (330)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCCEEEEEEESS
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEECCCC
Confidence 4456899999999999999999998776554
No 157
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=41.95 E-value=28 Score=37.59 Aligned_cols=77 Identities=10% Similarity=0.156 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCCCCcceEEe-------ecccchhHHHHHHHHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFRSNIKSINL-------SGMGCSAGILSISLVK 151 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~~~~~~~~i-------~~~gC~~~~~aL~~A~ 151 (401)
+-..+++++||+++|++|+|||.|-.. |.+..--|.-+..|.+.+|-... ...-| ....+++|+.++-.+.
T Consensus 269 ~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~~~~-~~~~vgs~Ks~iGH~~~AaG~~~lik~~ 347 (965)
T 3hhd_A 269 DIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQ-EPLLIGSTKSNMGHPEPASGLAALAKVL 347 (965)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHCSSCS-SCEEEECTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCHHHHHHHHHHhcccCC-CceeeeccccccccchhhhhHHHHHHHH
Confidence 445689999999999999999999743 43322234444556666664321 11222 2245566777766666
Q ss_pred HHHHcC
Q 044359 152 DLLKVH 157 (401)
Q Consensus 152 ~~i~~g 157 (401)
..++.+
T Consensus 348 l~l~~~ 353 (965)
T 3hhd_A 348 LSLEHG 353 (965)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 667665
No 158
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=39.85 E-value=46 Score=32.73 Aligned_cols=44 Identities=2% Similarity=0.088 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHH--------hCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcC
Q 044359 78 TEEVLCTIVKDLLS--------KHKINPKSIDILVTNCSIFCPTPSISSMIINKFG 125 (401)
Q Consensus 78 ~~~la~~Aa~~aL~--------~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LG 125 (401)
+.+-+.+..++.|+ ++|+.++|||.+++.. ....+...+.++||
T Consensus 236 a~~~~~~~~~~~l~~~~~~~~~~~g~~~~did~~v~H~----~~~ki~~~~~~~L~ 287 (478)
T 2p8u_A 236 ALDRCYSVYCKKIHAQWQKEGNDKDFTLNDFGFMIFHS----PYCKLVQKSLARML 287 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCCGGGCSEEEECC----SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccccccCCChHHcCEEEecC----CcHHHHHHHHHHhC
Confidence 44445566777776 7899999999998754 12233445666666
No 159
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=39.57 E-value=14 Score=37.48 Aligned_cols=26 Identities=8% Similarity=0.084 Sum_probs=22.7
Q ss_pred HHHHHHHHHhCCCCcCCcCEEEEeee
Q 044359 83 CTIVKDLLSKHKINPKSIDILVTNCS 108 (401)
Q Consensus 83 ~~Aa~~aL~~ag~~~~dId~li~~s~ 108 (401)
..|++.+|+++|++++|||+|.++..
T Consensus 53 ~~AI~~cL~~AGi~~~DID~Va~~~~ 78 (576)
T 3ven_A 53 VQAAAFCLAQAGLTVDDLDAVAFGWD 78 (576)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEESSC
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEECC
Confidence 46789999999999999999997653
No 160
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=37.79 E-value=17 Score=35.01 Aligned_cols=46 Identities=15% Similarity=0.167 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcC
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFG 125 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LG 125 (401)
.-..+|.+++|+++|++++|||.|... +.+..--+.-...+...+|
T Consensus 279 ~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~~ 325 (412)
T 4ewg_A 279 STMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATARTFG 325 (412)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHHHHHHHHHHcC
Confidence 456789999999999999999999843 3221111223344555555
No 161
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=34.87 E-value=53 Score=32.03 Aligned_cols=28 Identities=7% Similarity=0.058 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEee
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNC 107 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s 107 (401)
.-...+.+++|+++++.++|+|.+++..
T Consensus 227 ~~~~~~~~~~l~~~~~~~~d~d~~v~Hq 254 (460)
T 2wya_A 227 KKIQNQWKQAGSDRPFTLDDLQYMIFHT 254 (460)
T ss_dssp HHHHHHHHHTTCCCCCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHHHcCCCHHHHhhhhhcc
Confidence 3445667778888999999999999754
No 162
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=32.45 E-value=22 Score=34.29 Aligned_cols=26 Identities=15% Similarity=0.164 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhCCCCcCCcCEEEEe
Q 044359 81 VLCTIVKDLLSKHKINPKSIDILVTN 106 (401)
Q Consensus 81 la~~Aa~~aL~~ag~~~~dId~li~~ 106 (401)
-..++++++|+++|++++|||.+...
T Consensus 286 ~~~~ai~~al~~agl~~~dId~ve~H 311 (416)
T 2wge_A 286 RAGRAMTRSLELAGLSPADIDHVNAH 311 (416)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 45689999999999999999999754
No 163
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=31.75 E-value=77 Score=29.94 Aligned_cols=50 Identities=18% Similarity=0.214 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
...+-..+.++++|+++++.+.+|+.|+.+...- ..|.+...+.+.+|.+
T Consensus 322 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-~~p~v~~~l~~~f~~~ 371 (409)
T 4gni_A 322 TVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTS-NTPRIAANFRYIFPES 371 (409)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGG-GCHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCcc-ccHHHHHHHHHHcCCc
Confidence 3344556788999999999999999999775211 3788889999999865
No 164
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=31.68 E-value=42 Score=31.85 Aligned_cols=53 Identities=19% Similarity=0.244 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCC----------cHHHHHHHHcCCC
Q 044359 75 REETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTP----------SISSMIINKFGFR 127 (401)
Q Consensus 75 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p----------~~a~~l~~~LGl~ 127 (401)
...-..+-.+|++++|+++++++++||.|-+...+-+..| +....|++++|++
T Consensus 67 ~~~lg~~~a~av~~~l~~~~~~~~~i~~IGsHGQTv~H~P~~~~~~TlQiGd~~~iA~~tgi~ 129 (370)
T 3cqy_A 67 DRSVGKLFALAVNNLLAKTKIAKDEIIAIGSHGQTVRHMPNLEVGFTLQIGDPNTIATETGID 129 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEETTSSSCEEEEESCHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccccEEEeCCcccccCCCCCCCceEecCCHHHHHHHHCcC
Confidence 3344567789999999999999999999876542211111 2467899999985
No 165
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=29.39 E-value=62 Score=32.82 Aligned_cols=49 Identities=14% Similarity=0.137 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCC
Q 044359 77 ETEEVLCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 77 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~ 127 (401)
...+-....++++|+++++++++||.|+.++ ++ ..|.+-..+.+.+|.+
T Consensus 311 ~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~s--riP~v~~~l~~~fg~~ 360 (605)
T 4b9q_A 311 DLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQT--RMPMVQKKVAEFFGKE 360 (605)
T ss_dssp HHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGG--GSHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCcc--CchHHHHHHHHHhccC
Confidence 3344456778999999999999999999875 32 3788888999999865
No 166
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=29.22 E-value=20 Score=38.61 Aligned_cols=78 Identities=9% Similarity=0.155 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEe-eecCCCCCcHHHHHHHHcCCCCC-cceEEe-------ecccchhHHHHHHHH
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTN-CSIFCPTPSISSMIINKFGFRSN-IKSINL-------SGMGCSAGILSISLV 150 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~l~~~LGl~~~-~~~~~i-------~~~gC~~~~~aL~~A 150 (401)
+-..++++++|+++|++|+|||.+... +.+..--|.-...+.+.+|.... .....+ .....++|+.+|-.+
T Consensus 308 ~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~ 387 (917)
T 2hg4_A 308 PAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKA 387 (917)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccCcHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHH
Confidence 455688999999999999999998754 32221123334445556664211 112222 223456666666666
Q ss_pred HHHHHcC
Q 044359 151 KDLLKVH 157 (401)
Q Consensus 151 ~~~i~~g 157 (401)
...++.+
T Consensus 388 vl~L~~~ 394 (917)
T 2hg4_A 388 VLALRHG 394 (917)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 6666665
No 167
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=25.54 E-value=85 Score=29.28 Aligned_cols=47 Identities=15% Similarity=0.174 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCC
Q 044359 80 EVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 80 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~ 127 (401)
+=..+.++++|+++++.+++|+.|+.+... ...|.+..++.+.+|.+
T Consensus 314 ~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~-s~~p~l~~~l~~~~~~~ 360 (383)
T 1dkg_D 314 NRSIELLKVALQDAGLSVSDIDDVILVGGQ-TRMPMVQKKVAEFFGKE 360 (383)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCCEEEEESGG-GGSHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHcCCCHhhCCEEEEecCc-cccHHHHHHHHHHhCCC
Confidence 334567889999999999999999987521 14788889999999864
No 168
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=24.54 E-value=58 Score=33.59 Aligned_cols=44 Identities=18% Similarity=0.315 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCC
Q 044359 82 LCTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFR 127 (401)
Q Consensus 82 a~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~ 127 (401)
....++++|+++++++++||.|+.++ ++ .+|.+...|.+.+|.+
T Consensus 317 i~~~i~~~L~~a~l~~~~I~~VvLvGGss--riP~v~~~l~~~fg~~ 361 (675)
T 3d2f_A 317 VTEPVTKALAQAKLSAEEVDFVEIIGGTT--RIPTLKQSISEAFGKP 361 (675)
T ss_dssp TTHHHHHHHHHHTCCGGGCCEEEEESGGG--GSHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHhCCChhhCcEEEEECCCc--cChHHHHHHHHhcCCC
Confidence 35678899999999999999999775 32 3788889999999864
No 169
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=20.88 E-value=1.5e+02 Score=27.58 Aligned_cols=48 Identities=17% Similarity=0.242 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHc-CCC
Q 044359 79 EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKF-GFR 127 (401)
Q Consensus 79 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~L-Gl~ 127 (401)
.+-..+.++++|+++++++.+|+.|+.+... ...|.+...+.+.+ |.+
T Consensus 323 ~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~-s~~p~l~~~l~~~~~~~~ 371 (394)
T 3qfu_A 323 FKKTLKPVEKVLQDSGLEKKDVDDIVLVGGS-TRIPKVQQLLESYFDGKK 371 (394)
T ss_dssp HHHTHHHHHHHHHHHTCCGGGCCEEEEESGG-GGSHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCc-cccHHHHHHHHHHcCCCC
Confidence 3344567788999999999999999987521 13788889999999 554
Done!