Query 044366
Match_columns 918
No_of_seqs 828 out of 5561
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 03:57:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044366.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044366hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.8E-72 6.1E-77 685.4 38.5 564 3-572 83-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.2E-67 4E-72 643.1 37.8 539 1-545 54-700 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 1.2E-62 4.1E-67 594.2 44.1 537 3-542 10-626 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 3.5E-62 1.2E-66 590.1 45.0 534 24-560 7-624 (680)
5 3t6q_A CD180 antigen; protein- 100.0 2.6E-60 8.9E-65 566.0 41.1 533 2-543 17-565 (606)
6 3j0a_A TOLL-like receptor 5; m 100.0 2E-59 7E-64 576.5 44.5 524 2-543 9-565 (844)
7 3vq2_A TLR4, TOLL-like recepto 100.0 2.6E-58 8.9E-63 548.8 38.6 528 2-543 16-563 (606)
8 3t6q_A CD180 antigen; protein- 100.0 1.5E-57 5.2E-62 542.1 37.5 512 1-518 37-564 (606)
9 3j0a_A TOLL-like receptor 5; m 100.0 1.8E-56 6.1E-61 550.3 35.5 502 1-516 28-562 (844)
10 3vq2_A TLR4, TOLL-like recepto 100.0 1.4E-55 4.7E-60 525.3 33.5 507 1-518 36-562 (606)
11 2z63_A TOLL-like receptor 4, v 100.0 8.4E-53 2.9E-57 497.8 31.8 506 4-545 14-538 (570)
12 2z63_A TOLL-like receptor 4, v 100.0 2.1E-51 7.3E-56 485.8 36.2 485 1-518 32-535 (570)
13 2z81_A CD282 antigen, TOLL-lik 100.0 2.1E-51 7.1E-56 483.3 31.7 482 25-543 9-515 (549)
14 4gt4_A Tyrosine-protein kinase 100.0 3E-51 1E-55 436.6 20.1 255 647-918 27-303 (308)
15 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-51 4.9E-56 437.2 15.3 254 646-917 13-285 (299)
16 2z81_A CD282 antigen, TOLL-lik 100.0 5.9E-50 2E-54 470.9 29.0 479 2-518 10-514 (549)
17 3omv_A RAF proto-oncogene seri 100.0 8.9E-51 3E-55 430.6 19.6 257 645-917 35-296 (307)
18 4aoj_A High affinity nerve gro 100.0 8.9E-51 3E-55 437.3 19.8 254 646-917 41-315 (329)
19 4fih_A Serine/threonine-protei 100.0 1E-50 3.6E-55 435.1 19.0 249 646-914 74-323 (346)
20 4eco_A Uncharacterized protein 100.0 5.9E-51 2E-55 484.5 16.9 447 22-516 82-602 (636)
21 4b9d_A Serine/threonine-protei 100.0 8E-51 2.7E-55 436.7 15.4 252 646-914 24-276 (350)
22 4g8a_A TOLL-like receptor 4; l 100.0 3E-48 1E-52 465.4 38.7 524 8-543 42-585 (635)
23 4eco_A Uncharacterized protein 100.0 1.3E-50 4.6E-55 481.4 14.3 436 2-492 86-602 (636)
24 2z7x_B TOLL-like receptor 1, v 100.0 7.2E-50 2.5E-54 466.6 20.0 458 24-543 3-486 (520)
25 4fie_A Serine/threonine-protei 100.0 1.7E-49 5.9E-54 436.3 20.3 249 646-914 151-400 (423)
26 4ecn_A Leucine-rich repeat pro 100.0 1.6E-48 5.5E-53 469.7 27.3 473 21-539 323-865 (876)
27 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.8E-49 6.1E-54 419.0 15.6 248 646-912 32-282 (311)
28 2z7x_B TOLL-like receptor 1, v 100.0 2.7E-48 9.1E-53 453.3 26.9 453 1-517 4-484 (520)
29 4g3f_A NF-kappa-beta-inducing 100.0 1.4E-49 4.9E-54 425.1 14.5 249 645-917 57-312 (336)
30 3fpq_A Serine/threonine-protei 100.0 1E-48 3.5E-53 411.7 20.1 246 649-914 29-282 (290)
31 3hyh_A Carbon catabolite-derep 100.0 1.1E-48 3.8E-53 407.6 19.4 248 646-914 13-262 (275)
32 4ecn_A Leucine-rich repeat pro 100.0 2.9E-48 1E-52 467.5 25.3 444 45-542 323-844 (876)
33 3hmm_A TGF-beta receptor type- 100.0 6.8E-49 2.3E-53 420.2 16.0 261 646-918 3-294 (303)
34 3ubd_A Ribosomal protein S6 ki 100.0 7.4E-49 2.5E-53 414.7 13.4 249 646-914 24-281 (304)
35 4ase_A Vascular endothelial gr 100.0 1.6E-48 5.3E-53 423.1 15.5 263 639-917 57-343 (353)
36 4g31_A Eukaryotic translation 100.0 1.5E-47 5.2E-52 407.2 16.7 250 646-914 5-279 (299)
37 4g8a_A TOLL-like receptor 4; l 100.0 1.8E-45 6.2E-50 441.2 33.9 506 1-515 56-581 (635)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.1E-46 3.9E-51 443.1 21.3 460 23-543 33-515 (562)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6E-45 2E-49 428.5 26.1 456 1-518 35-514 (562)
40 4b99_A Mitogen-activated prote 100.0 5.4E-44 1.8E-48 394.6 20.9 259 646-914 54-344 (398)
41 4f9c_A Cell division cycle 7-r 100.0 1.5E-43 5.3E-48 387.0 22.5 203 638-855 13-250 (361)
42 3v47_A TOLL-like receptor 5B a 100.0 9.6E-43 3.3E-47 399.4 25.8 392 96-545 13-415 (455)
43 3uto_A Twitchin; kinase, muscl 100.0 6.5E-43 2.2E-47 405.7 18.8 252 645-914 156-410 (573)
44 3v5w_A G-protein coupled recep 100.0 2.6E-43 9E-48 403.8 14.6 252 645-914 188-449 (689)
45 1jl5_A Outer protein YOPM; leu 100.0 7E-42 2.4E-46 388.4 25.2 426 19-524 9-439 (454)
46 3v47_A TOLL-like receptor 5B a 100.0 1.1E-41 3.8E-46 390.5 25.7 386 72-518 13-412 (455)
47 1jl5_A Outer protein YOPM; leu 100.0 5.9E-42 2E-46 389.0 23.0 426 38-544 5-435 (454)
48 3uim_A Brassinosteroid insensi 100.0 5.3E-42 1.8E-46 374.6 21.7 280 634-918 18-308 (326)
49 3fxz_A Serine/threonine-protei 100.0 1.7E-41 5.9E-46 364.5 21.2 250 645-914 19-269 (297)
50 3p86_A Serine/threonine-protei 100.0 8.7E-42 3E-46 368.7 15.9 263 639-917 30-294 (309)
51 2c30_A Serine/threonine-protei 100.0 6.4E-41 2.2E-45 364.2 22.5 261 634-914 23-294 (321)
52 2qkw_B Protein kinase; three-h 100.0 4.2E-41 1.4E-45 366.5 20.8 272 637-917 30-311 (321)
53 2nru_A Interleukin-1 receptor- 100.0 2.4E-40 8.1E-45 358.3 25.4 277 634-918 13-303 (307)
54 3s95_A LIMK-1, LIM domain kina 100.0 1.5E-40 5.2E-45 360.2 20.2 255 645-917 9-278 (310)
55 2yab_A Death-associated protei 100.0 2.5E-40 8.6E-45 363.8 21.2 256 644-914 10-272 (361)
56 2psq_A Fibroblast growth facto 100.0 2.2E-40 7.6E-45 366.9 20.3 256 645-917 80-360 (370)
57 3zgw_A Maternal embryonic leuc 100.0 1.5E-40 5.2E-45 363.1 18.5 250 644-914 8-260 (347)
58 3c0i_A Peripheral plasma membr 100.0 1.4E-40 4.9E-45 366.1 18.1 258 645-914 23-286 (351)
59 3fe3_A MAP/microtubule affinit 100.0 1.8E-40 6.1E-45 360.7 18.3 250 644-914 13-264 (328)
60 4dc2_A Protein kinase C IOTA t 100.0 2.7E-40 9.2E-45 366.5 20.0 255 644-909 50-307 (396)
61 1o6l_A RAC-beta serine/threoni 100.0 4.3E-40 1.5E-44 358.6 21.2 251 645-914 4-260 (337)
62 4euu_A Serine/threonine-protei 100.0 1.2E-39 4E-44 354.7 24.3 265 645-916 8-304 (319)
63 3q4u_A Activin receptor type-1 100.0 2.3E-40 7.7E-45 357.4 17.8 257 645-918 7-299 (301)
64 3soa_A Calcium/calmodulin-depe 100.0 2.5E-40 8.5E-45 373.4 18.8 256 643-914 8-267 (444)
65 1tki_A Titin; serine kinase, m 100.0 1.8E-40 6.3E-45 360.2 17.0 251 645-914 4-257 (321)
66 3kul_A Ephrin type-A receptor 100.0 1.4E-40 4.8E-45 362.2 16.0 254 645-917 48-309 (325)
67 3niz_A Rhodanese family protei 100.0 5.8E-40 2E-44 355.2 20.7 262 644-914 19-300 (311)
68 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.7E-40 2.3E-44 347.2 20.7 254 644-918 6-261 (268)
69 4eqm_A Protein kinase; transfe 100.0 3.4E-40 1.2E-44 354.0 18.6 259 645-918 10-272 (294)
70 2y0a_A Death-associated protei 100.0 6.6E-40 2.3E-44 357.1 20.2 255 645-914 10-271 (326)
71 3soc_A Activin receptor type-2 100.0 1.3E-40 4.6E-45 362.2 14.2 265 644-918 22-315 (322)
72 4hcu_A Tyrosine-protein kinase 100.0 5E-40 1.7E-44 348.4 18.1 252 645-917 9-262 (269)
73 3dtc_A Mitogen-activated prote 100.0 7.4E-40 2.5E-44 347.6 18.8 257 645-918 6-270 (271)
74 3qd2_B Eukaryotic translation 100.0 1.1E-39 3.7E-44 357.5 20.2 251 645-914 5-325 (332)
75 3a8x_A Protein kinase C IOTA t 100.0 7.1E-40 2.4E-44 358.7 18.6 254 645-909 8-264 (345)
76 2id5_A Lingo-1, leucine rich r 100.0 6.7E-39 2.3E-43 369.4 27.7 328 23-353 13-340 (477)
77 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.3E-40 1.1E-44 362.0 15.9 253 643-914 20-280 (353)
78 3o0g_A Cell division protein k 100.0 1.1E-39 3.7E-44 350.2 19.3 261 646-914 2-282 (292)
79 3bz5_A Internalin-J, INLJ; leu 100.0 1.3E-38 4.5E-43 361.7 29.1 235 9-271 30-264 (457)
80 1ob3_A PFPK5, cell division co 100.0 1.2E-39 4.2E-44 348.9 19.3 260 646-914 2-280 (288)
81 3cbl_A C-FES, proto-oncogene t 100.0 3.8E-40 1.3E-44 366.5 15.9 255 644-917 112-370 (377)
82 2qol_A Ephrin receptor; recept 100.0 5.2E-40 1.8E-44 364.2 16.8 254 645-917 44-305 (373)
83 1o6v_A Internalin A; bacterial 100.0 1.9E-38 6.4E-43 363.9 29.9 345 92-515 45-389 (466)
84 2bdw_A Hypothetical protein K1 100.0 7.2E-40 2.4E-44 361.5 17.4 254 644-914 27-284 (362)
85 3bz5_A Internalin-J, INLJ; leu 100.0 8.7E-39 3E-43 363.3 26.6 269 62-398 35-303 (457)
86 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.4E-40 1.8E-44 357.4 15.9 249 645-914 8-258 (336)
87 2zv2_A Calcium/calmodulin-depe 100.0 2.3E-39 8E-44 348.7 20.2 253 645-914 12-292 (298)
88 3ugc_A Tyrosine-protein kinase 100.0 6.8E-40 2.3E-44 352.4 15.9 262 644-917 8-287 (295)
89 3a62_A Ribosomal protein S6 ki 100.0 1.5E-39 5.1E-44 354.4 18.8 252 645-914 16-276 (327)
90 3tki_A Serine/threonine-protei 100.0 9.9E-40 3.4E-44 355.0 17.2 252 645-914 6-261 (323)
91 3lb7_A RAF proto-oncogene seri 100.0 3.8E-39 1.3E-43 347.9 20.8 258 644-917 34-296 (307)
92 2pmi_A Negative RE, cyclin-dep 100.0 3E-39 1E-43 350.7 19.7 262 645-914 4-293 (317)
93 3gen_A Tyrosine-protein kinase 100.0 2.2E-39 7.7E-44 346.2 18.4 253 644-917 22-276 (283)
94 1xjd_A Protein kinase C, theta 100.0 9.8E-40 3.3E-44 356.7 15.8 253 642-913 13-268 (345)
95 1kob_A Twitchin; kinase, intra 100.0 2.4E-39 8.3E-44 359.2 19.1 252 645-914 50-304 (387)
96 3vhe_A Vascular endothelial gr 100.0 5.7E-40 2E-44 363.8 13.9 265 637-917 13-351 (359)
97 3kn6_A Ribosomal protein S6 ki 100.0 1.5E-39 5.1E-44 353.9 16.3 250 651-914 16-270 (325)
98 1luf_A Muscle-specific tyrosin 100.0 1.5E-39 5.2E-44 358.0 16.5 260 641-917 42-331 (343)
99 3tt0_A Basic fibroblast growth 100.0 3.4E-39 1.1E-43 359.8 19.2 257 644-917 67-348 (382)
100 2izr_A Casein kinase I isoform 100.0 9.7E-40 3.3E-44 357.0 14.5 256 645-917 8-277 (330)
101 3v8s_A RHO-associated protein 100.0 4.7E-40 1.6E-44 366.7 12.0 260 639-914 62-329 (410)
102 1qcf_A Haematopoetic cell kina 100.0 2.1E-39 7E-44 369.6 17.6 255 643-918 185-441 (454)
103 4fr4_A YANK1, serine/threonine 100.0 6.2E-39 2.1E-43 354.4 20.8 252 646-914 15-271 (384)
104 1rjb_A FL cytokine receptor; k 100.0 2.4E-39 8.3E-44 356.4 17.3 259 643-917 42-330 (344)
105 2w4o_A Calcium/calmodulin-depe 100.0 2.7E-39 9.2E-44 355.4 17.5 251 644-914 51-305 (349)
106 1fot_A TPK1 delta, CAMP-depend 100.0 8.2E-39 2.8E-43 346.0 20.9 248 645-914 5-258 (318)
107 3l9p_A Anaplastic lymphoma kin 100.0 2E-39 7E-44 359.0 16.5 256 645-917 70-341 (367)
108 2i0e_A Protein kinase C-beta I 100.0 3.1E-39 1.1E-43 354.0 17.7 253 643-914 17-276 (353)
109 3hko_A Calcium/calmodulin-depe 100.0 3E-39 1E-43 355.9 17.6 263 641-914 21-330 (345)
110 3cok_A Serine/threonine-protei 100.0 3E-39 1E-43 344.3 17.0 252 645-914 10-262 (278)
111 2x4f_A Myosin light chain kina 100.0 2.8E-39 9.7E-44 357.9 17.1 247 650-914 93-342 (373)
112 2a2a_A Death-associated protei 100.0 7.2E-39 2.5E-43 348.6 19.8 255 645-914 11-272 (321)
113 2qr7_A Ribosomal protein S6 ki 100.0 2.5E-39 8.5E-44 353.9 16.2 252 644-914 20-277 (342)
114 4f0f_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 341.4 21.1 256 645-918 18-286 (287)
115 1rdq_E PKA C-alpha, CAMP-depen 100.0 7E-39 2.4E-43 351.3 19.4 247 646-914 41-293 (350)
116 1o6v_A Internalin A; bacterial 100.0 1.6E-37 5.4E-42 356.1 31.6 345 20-443 45-389 (466)
117 4aw2_A Serine/threonine-protei 100.0 3.8E-39 1.3E-43 362.2 17.5 264 638-914 66-338 (437)
118 1opk_A P150, C-ABL, proto-onco 100.0 5.2E-39 1.8E-43 369.6 19.0 255 644-918 218-475 (495)
119 3uc3_A Serine/threonine-protei 100.0 1.1E-38 3.6E-43 352.2 20.6 253 644-914 18-274 (361)
120 2i1m_A Macrophage colony-stimu 100.0 1.4E-39 4.9E-44 356.5 13.5 261 641-917 41-322 (333)
121 2ivs_A Proto-oncogene tyrosine 100.0 5.2E-39 1.8E-43 349.0 17.6 257 644-917 21-307 (314)
122 3f3z_A Calcium/calmodulin-depe 100.0 8.3E-39 2.8E-43 340.6 18.8 251 644-914 7-261 (277)
123 1k9a_A Carboxyl-terminal SRC k 100.0 1.1E-38 3.9E-43 362.8 21.1 249 644-917 191-441 (450)
124 2eva_A TAK1 kinase - TAB1 chim 100.0 1.1E-38 3.6E-43 344.7 19.9 251 646-917 8-259 (307)
125 1t46_A HOMO sapiens V-KIT hard 100.0 4.5E-39 1.5E-43 349.4 16.9 259 644-918 21-304 (313)
126 4e5w_A Tyrosine-protein kinase 100.0 6.1E-39 2.1E-43 346.4 17.8 262 645-917 20-298 (302)
127 3poz_A Epidermal growth factor 100.0 5.2E-39 1.8E-43 350.5 17.4 253 645-917 14-274 (327)
128 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.6E-39 1.9E-43 365.5 18.2 254 644-918 182-437 (452)
129 4eut_A Serine/threonine-protei 100.0 6.1E-39 2.1E-43 359.3 18.2 266 645-917 8-305 (396)
130 4ejn_A RAC-alpha serine/threon 100.0 2E-39 6.7E-44 369.4 14.2 252 644-914 146-404 (446)
131 3kk8_A Calcium/calmodulin depe 100.0 1E-38 3.6E-43 341.2 18.8 253 645-914 5-261 (284)
132 3gni_B Strad alpha; kinase fol 100.0 6.7E-39 2.3E-43 358.8 18.0 265 644-914 23-333 (389)
133 3t9t_A Tyrosine-protein kinase 100.0 6.9E-39 2.4E-43 339.3 17.1 252 645-917 7-260 (267)
134 3gxj_A TGF-beta receptor type- 100.0 1.8E-40 6.1E-45 358.6 4.8 256 645-918 2-294 (303)
135 3qup_A Tyrosine-protein kinase 100.0 6.4E-39 2.2E-43 349.7 17.2 259 643-917 20-294 (323)
136 3mdy_A Bone morphogenetic prot 100.0 1.7E-38 5.9E-43 348.6 20.6 267 638-917 29-327 (337)
137 3ork_A Serine/threonine protei 100.0 8.3E-40 2.9E-44 354.3 9.8 255 645-914 11-273 (311)
138 2r5t_A Serine/threonine-protei 100.0 5.2E-39 1.8E-43 354.6 16.0 250 645-913 37-288 (373)
139 3kmu_A ILK, integrin-linked ki 100.0 8.4E-39 2.9E-43 339.5 16.7 251 645-917 9-266 (271)
140 1mp8_A Focal adhesion kinase 1 100.0 7.5E-39 2.6E-43 341.6 16.3 254 644-917 13-272 (281)
141 2pvf_A Fibroblast growth facto 100.0 1.3E-38 4.5E-43 348.7 18.6 257 644-917 33-314 (334)
142 4agu_A Cyclin-dependent kinase 100.0 7.1E-39 2.4E-43 347.4 16.3 260 646-914 3-284 (311)
143 3is5_A Calcium-dependent prote 100.0 9.9E-39 3.4E-43 341.2 17.0 253 645-914 21-278 (285)
144 2wqm_A Serine/threonine-protei 100.0 1.2E-38 4E-43 345.4 17.8 262 644-917 30-293 (310)
145 3g33_A Cell division protein k 100.0 2.5E-38 8.7E-43 342.4 20.4 265 643-914 6-296 (308)
146 3bhy_A Death-associated protei 100.0 1.9E-38 6.7E-43 338.9 19.0 254 646-914 5-265 (283)
147 2h34_A Serine/threonine-protei 100.0 7.7E-39 2.6E-43 346.3 15.9 259 643-917 31-292 (309)
148 2y94_A 5'-AMP-activated protei 100.0 2.2E-38 7.5E-43 359.6 20.3 250 645-914 15-266 (476)
149 1csn_A Casein kinase-1; phosph 100.0 1.2E-38 4.1E-43 343.4 17.2 255 645-917 9-279 (298)
150 2eue_A Carbon catabolite derep 100.0 1.4E-38 4.9E-43 338.3 17.6 248 646-914 13-262 (275)
151 3kex_A Receptor tyrosine-prote 100.0 9E-39 3.1E-43 348.4 16.1 253 645-917 12-272 (325)
152 3dls_A PAS domain-containing s 100.0 8.1E-39 2.8E-43 349.5 15.7 246 644-914 22-274 (335)
153 3dbq_A Dual specificity protei 100.0 1.3E-38 4.3E-43 349.9 17.2 250 645-914 8-273 (343)
154 1qpc_A LCK kinase; alpha beta 100.0 2.4E-38 8.2E-43 337.4 18.9 253 644-917 11-265 (279)
155 3kfa_A Tyrosine-protein kinase 100.0 4.1E-39 1.4E-43 345.2 12.9 255 643-917 10-267 (288)
156 2vd5_A DMPK protein; serine/th 100.0 1E-38 3.5E-43 356.2 16.5 263 638-914 53-327 (412)
157 3og7_A AKAP9-BRAF fusion prote 100.0 9.5E-39 3.3E-43 342.2 15.6 260 643-918 21-285 (289)
158 1nxk_A MAP kinase-activated pr 100.0 1.6E-38 5.4E-43 355.5 17.9 251 646-914 61-321 (400)
159 3mtl_A Cell division protein k 100.0 6.8E-39 2.3E-43 349.1 14.5 259 646-914 2-281 (324)
160 3a7i_A MST3 kinase, serine/thr 100.0 4.7E-38 1.6E-42 339.5 20.9 249 645-914 21-270 (303)
161 3fdn_A Serine/threonine-protei 100.0 1.9E-38 6.6E-43 338.1 17.7 250 644-914 7-257 (279)
162 1p4o_A Insulin-like growth fac 100.0 4.2E-39 1.4E-43 351.0 12.8 262 640-918 19-296 (322)
163 3p1a_A MYT1 kinase, membrane-a 100.0 1.5E-38 5.1E-43 344.2 16.8 247 645-914 56-304 (311)
164 2clq_A Mitogen-activated prote 100.0 6.4E-38 2.2E-42 337.1 21.7 253 646-914 22-278 (295)
165 1ua2_A CAK, cell division prot 100.0 2.5E-38 8.4E-43 348.1 18.8 267 641-914 5-291 (346)
166 3op5_A Serine/threonine-protei 100.0 9.9E-39 3.4E-43 353.9 15.4 263 644-917 33-325 (364)
167 2acx_A G protein-coupled recep 100.0 1.7E-38 6E-43 364.5 17.9 256 645-914 183-444 (576)
168 1b6c_B TGF-B superfamily recep 100.0 3.2E-38 1.1E-42 347.3 19.4 263 637-917 33-332 (342)
169 2y7j_A Phosphorylase B kinase 100.0 2.5E-38 8.6E-43 350.0 18.6 263 637-914 85-359 (365)
170 3ttj_A Mitogen-activated prote 100.0 3.1E-38 1.1E-42 359.4 19.6 257 645-914 61-355 (464)
171 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.9E-38 1.3E-42 361.3 20.3 256 646-913 185-447 (543)
172 2rku_A Serine/threonine-protei 100.0 2.9E-38 9.8E-43 339.6 18.0 252 644-914 13-265 (294)
173 1u5q_A Serine/threonine protei 100.0 1.5E-38 5.1E-43 348.9 16.0 247 646-914 54-305 (348)
174 3lxp_A Non-receptor tyrosine-p 100.0 2.7E-38 9.1E-43 343.5 17.8 257 648-917 33-306 (318)
175 2v62_A Serine/threonine-protei 100.0 1.5E-38 5E-43 349.7 15.8 262 645-918 36-325 (345)
176 2ac3_A MAP kinase-interacting 100.0 2E-38 6.8E-43 344.7 16.6 259 646-914 12-295 (316)
177 3lxl_A Tyrosine-protein kinase 100.0 1.8E-38 6E-43 346.7 16.2 261 645-917 22-299 (327)
178 2zmd_A Dual specificity protei 100.0 3.2E-38 1.1E-42 352.0 18.5 249 646-914 56-320 (390)
179 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.5E-38 5E-43 347.3 15.4 263 642-914 30-318 (329)
180 3c1x_A Hepatocyte growth facto 100.0 1.5E-38 5.1E-43 351.9 15.6 252 647-917 90-351 (373)
181 3lzb_A Epidermal growth factor 100.0 2.3E-38 7.8E-43 345.1 16.8 253 645-917 14-274 (327)
182 2w5a_A Serine/threonine-protei 100.0 8.6E-39 2.9E-43 340.9 13.0 257 645-917 5-270 (279)
183 3lm5_A Serine/threonine-protei 100.0 2.4E-38 8.2E-43 345.2 16.6 265 635-914 17-287 (327)
184 2id5_A Lingo-1, leucine rich r 100.0 2.5E-37 8.5E-42 356.3 26.0 320 144-490 14-333 (477)
185 1mqb_A Ephrin type-A receptor 100.0 4.2E-38 1.4E-42 344.1 18.4 253 646-917 44-305 (333)
186 3i6u_A CDS1, serine/threonine- 100.0 2.1E-38 7.3E-43 357.0 16.5 257 643-914 132-399 (419)
187 3com_A Serine/threonine-protei 100.0 6.2E-38 2.1E-42 340.5 19.5 252 643-914 26-278 (314)
188 3llt_A Serine/threonine kinase 100.0 4.6E-38 1.6E-42 348.4 18.6 263 638-914 27-355 (360)
189 2yex_A Serine/threonine-protei 100.0 7.3E-38 2.5E-42 333.2 19.2 252 645-914 6-261 (276)
190 2owb_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 345.3 16.9 252 644-914 39-291 (335)
191 3mwu_A Calmodulin-domain prote 100.0 5.7E-38 2E-42 361.4 19.5 253 644-914 20-276 (486)
192 2xir_A Vascular endothelial gr 100.0 2.7E-38 9.3E-43 343.7 15.9 264 638-917 19-306 (316)
193 3oz6_A Mitogen-activated prote 100.0 3.3E-38 1.1E-42 352.8 17.0 261 643-914 6-328 (388)
194 3g2f_A Bone morphogenetic prot 100.0 1.9E-38 6.3E-43 348.2 14.6 262 644-917 11-314 (336)
195 2jam_A Calcium/calmodulin-depe 100.0 4.6E-38 1.6E-42 339.6 17.4 251 644-914 7-261 (304)
196 3nyv_A Calmodulin-domain prote 100.0 2.9E-38 1E-42 364.1 16.8 253 645-914 25-281 (484)
197 4fvq_A Tyrosine-protein kinase 100.0 4.3E-38 1.5E-42 337.3 16.7 248 645-918 7-272 (289)
198 3lij_A Calcium/calmodulin depe 100.0 7.7E-38 2.6E-42 360.9 19.9 252 645-914 36-291 (494)
199 2h8h_A Proto-oncogene tyrosine 100.0 2.5E-38 8.7E-43 367.3 15.9 254 644-918 265-520 (535)
200 1u59_A Tyrosine-protein kinase 100.0 6.5E-38 2.2E-42 335.4 17.8 252 646-917 9-268 (287)
201 3pls_A Macrophage-stimulating 100.0 9E-38 3.1E-42 336.5 19.0 253 647-917 22-283 (298)
202 3f66_A Hepatocyte growth facto 100.0 6.7E-38 2.3E-42 337.5 17.9 254 645-917 24-287 (298)
203 3q5i_A Protein kinase; CDPK, m 100.0 9E-38 3.1E-42 361.3 20.1 255 644-914 34-301 (504)
204 1xbb_A Tyrosine-protein kinase 100.0 6.5E-38 2.2E-42 336.2 17.4 254 644-917 14-275 (291)
205 1vzo_A Ribosomal protein S6 ki 100.0 3.1E-38 1E-42 348.1 15.0 257 645-915 53-322 (355)
206 3cc6_A Protein tyrosine kinase 100.0 6.1E-38 2.1E-42 334.6 16.9 254 644-917 10-269 (281)
207 2vgo_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 333.2 18.7 249 645-914 13-262 (284)
208 3brb_A Proto-oncogene tyrosine 100.0 5.5E-38 1.9E-42 340.6 16.7 262 640-917 28-304 (313)
209 4aaa_A Cyclin-dependent kinase 100.0 3.9E-38 1.3E-42 344.5 15.5 262 645-914 24-306 (331)
210 3mi9_A Cell division protein k 100.0 1.5E-37 5.3E-42 342.8 20.4 261 645-914 16-311 (351)
211 2ozo_A Tyrosine-protein kinase 100.0 1.1E-37 3.6E-42 367.1 20.0 245 653-917 343-594 (613)
212 2jii_A Serine/threonine-protei 100.0 1.6E-38 5.6E-43 350.5 12.1 258 645-917 41-332 (352)
213 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.5E-38 1.6E-42 348.8 15.7 249 643-917 62-335 (365)
214 1fvr_A Tyrosine-protein kinase 100.0 8.8E-38 3E-42 341.1 17.7 254 646-917 25-296 (327)
215 1x8b_A WEE1HU, WEE1-like prote 100.0 1.1E-37 3.6E-42 334.3 17.9 248 644-914 9-279 (289)
216 2x7f_A TRAF2 and NCK-interacti 100.0 1.4E-37 4.8E-42 339.6 19.1 254 642-914 20-286 (326)
217 1cm8_A Phosphorylated MAP kina 100.0 1.2E-37 4E-42 344.7 18.6 256 645-914 24-307 (367)
218 2j7t_A Serine/threonine-protei 100.0 3.7E-38 1.3E-42 340.3 14.2 253 644-914 17-275 (302)
219 1t4h_A Serine/threonine-protei 100.0 2.2E-37 7.5E-42 332.0 20.0 248 647-914 27-282 (290)
220 3pfq_A PKC-B, PKC-beta, protei 100.0 1.4E-37 4.7E-42 369.4 20.2 252 643-913 338-596 (674)
221 2h6d_A 5'-AMP-activated protei 100.0 1.4E-37 5E-42 330.8 18.4 250 645-914 10-261 (276)
222 2a19_B Interferon-induced, dou 100.0 1.9E-37 6.6E-42 331.4 19.2 245 644-917 9-270 (284)
223 3n9x_A Phosphotransferase; mal 100.0 8.3E-38 2.8E-42 353.9 17.3 199 645-852 25-252 (432)
224 1byg_A CSK, protein (C-termina 100.0 6.6E-38 2.3E-42 333.8 15.5 248 645-917 20-269 (278)
225 2r3i_A Cell division protein k 100.0 1.9E-37 6.4E-42 334.2 19.0 261 646-914 3-283 (299)
226 2yfx_A Tyrosine-protein kinase 100.0 9.3E-38 3.2E-42 341.0 16.8 257 644-917 28-300 (327)
227 2buj_A Serine/threonine-protei 100.0 7E-38 2.4E-42 340.5 15.4 257 645-917 28-302 (317)
228 4hgt_A Casein kinase I isoform 100.0 2.6E-37 8.9E-42 332.6 19.6 257 644-917 7-276 (296)
229 3uzp_A CKI-delta, CKID, casein 100.0 3.6E-37 1.2E-41 331.4 20.4 255 645-917 8-276 (296)
230 2w1i_A JAK2; chromosomal rearr 100.0 1.1E-37 3.7E-42 340.1 16.4 261 645-917 40-318 (326)
231 3rp9_A Mitogen-activated prote 100.0 1.2E-37 4.1E-42 356.3 17.5 195 645-848 52-280 (458)
232 3byv_A Rhoptry kinase; malaria 100.0 1E-38 3.5E-43 355.4 8.3 245 645-914 72-359 (377)
233 3nsz_A CK II alpha, casein kin 100.0 4.8E-37 1.6E-41 336.0 21.3 252 646-914 36-319 (330)
234 1phk_A Phosphorylase kinase; g 100.0 2.4E-37 8.1E-42 333.2 18.4 256 644-914 15-283 (298)
235 2wtk_C Serine/threonine-protei 100.0 4.6E-37 1.6E-41 332.2 20.6 253 645-914 4-263 (305)
236 4fl3_A Tyrosine-protein kinase 100.0 1.5E-37 5.2E-42 366.4 18.2 246 652-917 375-627 (635)
237 2xrw_A Mitogen-activated prote 100.0 3.5E-37 1.2E-41 342.0 19.3 257 645-914 24-318 (371)
238 2ycf_A Serine/threonine-protei 100.0 9.6E-38 3.3E-42 340.0 14.3 256 644-914 8-274 (322)
239 2vwi_A Serine/threonine-protei 100.0 7.7E-38 2.6E-42 337.9 12.8 259 642-914 11-287 (303)
240 1u46_A ACK-1, activated CDC42 100.0 1.8E-37 6.1E-42 333.0 15.4 256 645-917 17-280 (291)
241 3pg1_A Mitogen-activated prote 100.0 2.9E-37 9.9E-42 342.3 17.6 270 637-914 13-316 (362)
242 2pml_X PFPK7, Ser/Thr protein 100.0 2.2E-37 7.4E-42 341.5 16.4 256 645-914 30-322 (348)
243 3eqc_A Dual specificity mitoge 100.0 1.8E-37 6.3E-42 343.5 15.9 258 645-914 32-324 (360)
244 3ll6_A Cyclin G-associated kin 100.0 1.4E-37 4.8E-42 341.4 14.3 251 644-917 26-304 (337)
245 3fme_A Dual specificity mitoge 100.0 1.8E-37 6.1E-42 332.8 14.3 255 645-914 6-266 (290)
246 3kvw_A DYRK2, dual specificity 100.0 7E-37 2.4E-41 345.5 19.8 199 645-856 96-303 (429)
247 2wei_A Calmodulin-domain prote 100.0 5.4E-37 1.8E-41 328.3 17.9 255 642-914 18-276 (287)
248 3q60_A ROP5B; pseudokinase, tr 100.0 8.3E-38 2.8E-42 347.4 11.6 256 646-914 62-352 (371)
249 2fst_X Mitogen-activated prote 100.0 1.5E-37 5.1E-42 343.3 13.2 256 645-914 28-311 (367)
250 3eb0_A Putative uncharacterize 100.0 8.6E-37 2.9E-41 340.6 19.4 259 642-914 3-321 (383)
251 3qyz_A Mitogen-activated prote 100.0 4.8E-37 1.6E-41 340.3 16.8 258 645-914 26-313 (364)
252 4e7w_A Glycogen synthase kinas 100.0 9.8E-37 3.4E-41 340.7 18.9 257 645-914 39-321 (394)
253 3o6n_A APL1; leucine-rich repe 100.0 2.9E-36 9.8E-41 337.7 22.1 311 164-540 44-354 (390)
254 1zy4_A Serine/threonine-protei 100.0 6.5E-37 2.2E-41 330.6 16.3 250 645-914 5-283 (303)
255 1blx_A Cyclin-dependent kinase 100.0 1.2E-36 4E-41 332.4 18.3 263 643-914 8-296 (326)
256 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.4E-37 1.5E-41 334.6 14.8 257 642-918 29-299 (319)
257 3sv0_A Casein kinase I-like; t 100.0 2.1E-36 7.2E-41 344.0 20.5 254 645-917 6-274 (483)
258 3e3p_A Protein kinase, putativ 100.0 8.8E-37 3E-41 338.3 16.9 266 638-914 15-314 (360)
259 4exu_A Mitogen-activated prote 100.0 1.7E-36 6E-41 336.4 19.3 255 645-914 41-323 (371)
260 1wak_A Serine/threonine-protei 100.0 6.7E-37 2.3E-41 344.3 16.1 258 645-914 36-391 (397)
261 3rgf_A Cyclin-dependent kinase 100.0 4.9E-37 1.7E-41 345.3 14.9 199 647-855 21-239 (405)
262 3an0_A Dual specificity mitoge 100.0 5.1E-37 1.8E-41 337.1 14.4 255 644-914 49-310 (340)
263 1j1b_A Glycogen synthase kinas 100.0 1.3E-36 4.4E-41 342.6 17.8 255 646-914 54-336 (420)
264 3cek_A Dual specificity protei 100.0 1.5E-36 5.3E-41 329.2 17.4 252 643-914 25-292 (313)
265 3fhr_A MAP kinase-activated pr 100.0 1.2E-36 4E-41 332.9 15.5 252 644-914 26-287 (336)
266 2b9h_A MAP kinase FUS3, mitoge 100.0 1.2E-36 4E-41 336.3 15.6 258 645-914 10-305 (353)
267 1z57_A Dual specificity protei 100.0 3.4E-36 1.2E-40 330.6 19.3 257 645-914 13-328 (339)
268 3coi_A Mitogen-activated prote 100.0 2.2E-36 7.6E-41 333.7 17.6 255 645-914 23-305 (353)
269 2j0j_A Focal adhesion kinase 1 100.0 1.6E-36 5.4E-41 359.1 17.2 256 642-917 386-647 (656)
270 3oja_B Anopheles plasmodium-re 100.0 5.2E-36 1.8E-40 354.1 21.4 333 164-562 50-384 (597)
271 3o6n_A APL1; leucine-rich repe 100.0 2E-35 6.8E-40 330.8 24.6 317 19-353 43-359 (390)
272 3qa8_A MGC80376 protein; kinas 100.0 5.3E-37 1.8E-41 355.2 11.9 262 644-912 12-295 (676)
273 2vx3_A Dual specificity tyrosi 100.0 6.5E-36 2.2E-40 333.4 20.3 202 644-856 52-262 (382)
274 2i6l_A Mitogen-activated prote 100.0 1.1E-36 3.7E-41 331.8 13.6 257 645-914 10-305 (320)
275 2rio_A Serine/threonine-protei 100.0 4.2E-36 1.4E-40 340.0 18.2 250 647-914 16-295 (434)
276 3a99_A Proto-oncogene serine/t 100.0 1.3E-36 4.4E-41 330.4 13.2 247 642-914 39-293 (320)
277 2iwi_A Serine/threonine-protei 100.0 2.8E-36 9.7E-41 327.0 14.2 249 640-914 25-283 (312)
278 3p23_A Serine/threonine-protei 100.0 4.2E-36 1.4E-40 338.6 15.9 249 644-914 22-283 (432)
279 1q8y_A SR protein kinase; tran 100.0 5.6E-36 1.9E-40 333.6 16.5 258 645-914 18-333 (373)
280 3aln_A Dual specificity mitoge 100.0 2.2E-36 7.4E-41 330.2 12.7 256 645-914 21-285 (327)
281 2eu9_A Dual specificity protei 100.0 1.8E-35 6.2E-40 327.1 18.7 256 645-914 18-333 (355)
282 2dyl_A Dual specificity mitoge 100.0 9.1E-36 3.1E-40 324.1 15.5 253 645-914 24-283 (318)
283 4fmz_A Internalin; leucine ric 100.0 1.8E-34 6.3E-39 317.8 26.2 307 17-346 40-346 (347)
284 4fmz_A Internalin; leucine ric 100.0 2E-34 6.8E-39 317.5 26.2 307 161-538 40-346 (347)
285 3oja_B Anopheles plasmodium-re 100.0 1.1E-34 3.9E-39 342.6 24.5 315 19-351 49-363 (597)
286 3uqc_A Probable conserved tran 100.0 2E-35 6.9E-40 314.7 11.2 231 645-917 30-261 (286)
287 2ft3_A Biglycan; proteoglycan, 100.0 4.9E-33 1.7E-37 304.0 28.3 286 22-318 34-329 (332)
288 3m2w_A MAP kinase-activated pr 100.0 2.2E-34 7.5E-39 309.8 15.9 231 645-914 16-256 (299)
289 2vuw_A Serine/threonine-protei 100.0 1.3E-34 4.4E-39 317.2 13.3 246 645-913 19-329 (336)
290 2ft3_A Biglycan; proteoglycan, 100.0 7.4E-33 2.5E-37 302.6 27.2 294 45-367 33-330 (332)
291 2pzi_A Probable serine/threoni 100.0 2.1E-34 7.2E-39 344.9 15.8 237 645-916 79-323 (681)
292 1xku_A Decorin; proteoglycan, 100.0 1.1E-32 3.7E-37 301.1 26.7 289 22-320 32-330 (330)
293 1xku_A Decorin; proteoglycan, 100.0 2.8E-32 9.5E-37 297.9 28.1 291 44-344 30-330 (330)
294 3dzo_A Rhoptry kinase domain; 100.0 4.1E-34 1.4E-38 321.4 13.7 244 646-914 78-363 (413)
295 1ogq_A PGIP-2, polygalacturona 100.0 1.7E-33 5.9E-38 304.1 15.9 252 21-275 50-306 (313)
296 1ogq_A PGIP-2, polygalacturona 100.0 2.3E-33 7.9E-38 303.1 15.3 252 45-299 50-306 (313)
297 1z7x_W Ribonuclease inhibitor; 100.0 1.6E-35 5.6E-40 339.9 -12.5 383 117-538 3-440 (461)
298 1z7x_W Ribonuclease inhibitor; 100.0 5.2E-35 1.8E-39 335.7 -10.4 361 141-540 3-413 (461)
299 2z80_A TOLL-like receptor 2, v 100.0 9.5E-31 3.2E-35 288.5 16.2 274 74-350 36-318 (353)
300 3zyj_A Leucine-rich repeat-con 100.0 1.7E-29 5.7E-34 287.2 23.7 254 95-353 45-299 (440)
301 2z66_A Variable lymphocyte rec 100.0 3.6E-30 1.2E-34 278.0 17.3 244 3-250 13-261 (306)
302 2z80_A TOLL-like receptor 2, v 100.0 4.3E-30 1.5E-34 283.2 17.3 284 14-300 24-316 (353)
303 3zyi_A Leucine-rich repeat-con 100.0 1.8E-29 6E-34 288.1 22.9 234 118-353 76-310 (452)
304 2z66_A Variable lymphocyte rec 100.0 1.6E-29 5.5E-34 272.9 18.4 279 72-378 10-295 (306)
305 1ozn_A Reticulon 4 receptor; N 100.0 2.7E-29 9.1E-34 268.1 17.4 252 96-375 14-266 (285)
306 3zyi_A Leucine-rich repeat-con 100.0 1.8E-28 6.2E-33 279.7 24.7 247 47-298 56-303 (452)
307 1ozn_A Reticulon 4 receptor; N 100.0 3E-29 1E-33 267.7 16.9 255 24-282 14-269 (285)
308 3zyj_A Leucine-rich repeat-con 100.0 2.2E-28 7.6E-33 277.9 24.8 247 47-298 45-292 (440)
309 3ogk_B Coronatine-insensitive 100.0 1.5E-31 5E-36 317.4 -4.0 432 85-535 65-548 (592)
310 3oja_A Leucine-rich immune mol 100.0 5.5E-30 1.9E-34 293.6 8.6 235 261-533 34-270 (487)
311 4fcg_A Uncharacterized protein 100.0 1.6E-28 5.6E-33 266.7 19.2 235 20-274 80-314 (328)
312 4fcg_A Uncharacterized protein 100.0 5.6E-28 1.9E-32 262.5 20.7 235 44-298 80-314 (328)
313 3ogk_B Coronatine-insensitive 100.0 3.6E-31 1.2E-35 314.0 -6.3 425 61-511 65-548 (592)
314 1wwl_A Monocyte differentiatio 100.0 1.1E-29 3.9E-34 274.3 3.2 248 42-299 40-310 (312)
315 1wwl_A Monocyte differentiatio 99.9 7.1E-29 2.4E-33 268.1 7.2 249 17-275 39-310 (312)
316 4azs_A Methyltransferase WBDD; 99.9 1.3E-29 4.6E-34 294.1 1.2 188 654-851 242-437 (569)
317 3g06_A SSPH2 (leucine-rich rep 99.9 9.3E-27 3.2E-31 271.7 25.1 268 21-332 40-307 (622)
318 3g06_A SSPH2 (leucine-rich rep 99.9 3.6E-26 1.2E-30 266.8 29.5 267 45-355 40-306 (622)
319 3o53_A Protein LRIM1, AGAP0063 99.9 5.2E-29 1.8E-33 269.8 4.4 256 24-293 13-270 (317)
320 3o53_A Protein LRIM1, AGAP0063 99.9 4.6E-29 1.6E-33 270.2 3.9 267 239-543 12-281 (317)
321 2z62_A TOLL-like receptor 4, v 99.9 2.2E-26 7.7E-31 244.1 18.9 211 334-545 29-244 (276)
322 3oja_A Leucine-rich immune mol 99.9 3.3E-27 1.1E-31 270.5 9.9 192 94-298 35-227 (487)
323 2o6q_A Variable lymphocyte rec 99.9 2E-25 7E-30 235.6 21.1 206 335-543 18-223 (270)
324 2z62_A TOLL-like receptor 4, v 99.9 9E-26 3.1E-30 239.5 18.3 230 97-350 11-241 (276)
325 2p1m_B Transport inhibitor res 99.9 4.3E-29 1.5E-33 296.2 -9.6 445 73-538 47-544 (594)
326 2p1m_B Transport inhibitor res 99.9 2.8E-29 9.5E-34 297.9 -11.5 86 428-513 455-543 (594)
327 2o6q_A Variable lymphocyte rec 99.9 1.4E-24 5E-29 229.1 22.3 206 118-350 17-222 (270)
328 3rfs_A Internalin B, repeat mo 99.9 1E-24 3.5E-29 230.4 17.3 209 41-260 37-245 (272)
329 1p9a_G Platelet glycoprotein I 99.9 3.7E-24 1.3E-28 227.8 20.7 203 17-250 6-208 (290)
330 1p9a_G Platelet glycoprotein I 99.9 4.1E-24 1.4E-28 227.5 20.9 194 2-202 15-208 (290)
331 3rfs_A Internalin B, repeat mo 99.9 8.1E-25 2.8E-29 231.2 14.8 208 66-284 38-245 (272)
332 3en9_A Glycoprotease, O-sialog 99.9 6.1E-25 2.1E-29 253.6 9.7 187 649-852 339-538 (540)
333 2xwt_C Thyrotropin receptor; s 99.9 5.7E-24 1.9E-28 220.2 14.9 177 71-250 33-218 (239)
334 3m19_A Variable lymphocyte rec 99.9 3.3E-23 1.1E-27 216.1 18.4 182 359-543 16-197 (251)
335 2xwt_C Thyrotropin receptor; s 99.9 2.1E-23 7.1E-28 216.0 16.5 196 46-247 32-236 (239)
336 3goz_A Leucine-rich repeat-con 99.9 1.5E-25 5.1E-30 247.5 -0.2 252 1-252 2-299 (362)
337 3goz_A Leucine-rich repeat-con 99.9 9.9E-25 3.4E-29 240.9 4.8 251 266-540 3-299 (362)
338 4glp_A Monocyte differentiatio 99.9 3.3E-23 1.1E-27 223.5 16.2 179 69-250 91-285 (310)
339 4glp_A Monocyte differentiatio 99.9 1.8E-23 6.2E-28 225.5 13.7 226 21-251 64-308 (310)
340 1h6u_A Internalin H; cell adhe 99.9 8.6E-23 2.9E-27 219.6 15.9 209 26-252 24-232 (308)
341 1h6u_A Internalin H; cell adhe 99.9 9E-23 3.1E-27 219.4 15.7 192 67-274 39-230 (308)
342 4ay9_X Follicle-stimulating ho 99.9 1.2E-22 4.1E-27 223.0 16.7 240 24-271 12-256 (350)
343 3m19_A Variable lymphocyte rec 99.9 3.9E-22 1.3E-26 207.9 19.4 178 22-202 15-192 (251)
344 2ast_B S-phase kinase-associat 99.9 2.5E-24 8.6E-29 235.6 2.7 254 22-283 48-315 (336)
345 2ast_B S-phase kinase-associat 99.9 2.8E-24 9.6E-29 235.2 3.0 254 46-307 48-315 (336)
346 2ca6_A RAN GTPase-activating p 99.9 1.5E-25 5.2E-30 250.1 -8.0 241 37-277 24-319 (386)
347 2ca6_A RAN GTPase-activating p 99.9 5.3E-25 1.8E-29 245.6 -4.2 241 61-301 24-319 (386)
348 4ay9_X Follicle-stimulating ho 99.9 1.2E-21 4E-26 215.0 19.8 238 74-319 14-256 (350)
349 1zar_A RIO2 kinase; serine kin 99.9 8.5E-22 2.9E-26 208.0 11.0 156 639-825 83-252 (282)
350 2o6s_A Variable lymphocyte rec 99.8 1.7E-20 5.9E-25 189.4 17.3 141 89-236 48-188 (208)
351 2o6s_A Variable lymphocyte rec 99.8 1.6E-20 5.5E-25 189.7 16.7 181 24-214 10-190 (208)
352 2v9t_B SLIT homolog 2 protein 99.8 5.7E-21 2E-25 194.3 13.3 156 384-542 14-169 (220)
353 2v70_A SLIT-2, SLIT homolog 2 99.8 7E-21 2.4E-25 193.7 12.7 156 385-543 15-171 (220)
354 2xot_A Amphoterin-induced prot 99.8 4.7E-21 1.6E-25 211.1 11.4 180 360-542 21-206 (361)
355 3e6j_A Variable lymphocyte rec 99.8 5.3E-20 1.8E-24 188.5 15.0 157 383-543 21-177 (229)
356 3cvr_A Invasion plasmid antige 99.8 3.1E-20 1.1E-24 213.9 14.5 188 286-525 60-254 (571)
357 1h6t_A Internalin B; cell adhe 99.8 3.3E-20 1.1E-24 197.5 12.4 190 23-228 26-215 (291)
358 1h6t_A Internalin B; cell adhe 99.8 3.6E-20 1.2E-24 197.2 12.5 190 47-252 26-215 (291)
359 3cvr_A Invasion plasmid antige 99.8 7.8E-20 2.7E-24 210.6 15.4 189 46-262 60-255 (571)
360 1m9s_A Internalin B; cell inva 99.8 8.9E-20 3.1E-24 212.7 14.2 198 23-236 23-220 (605)
361 2v9t_B SLIT homolog 2 protein 99.8 2.3E-19 7.9E-24 182.4 15.0 158 193-353 15-172 (220)
362 1m9s_A Internalin B; cell inva 99.8 1.3E-19 4.3E-24 211.5 14.8 171 67-251 41-211 (605)
363 2xot_A Amphoterin-induced prot 99.8 1.5E-19 5.3E-24 199.0 13.7 112 91-202 62-176 (361)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 6.3E-19 2.2E-23 179.1 14.9 111 113-223 53-163 (220)
365 3sb4_A Hypothetical leucine ri 99.8 8.1E-20 2.8E-24 198.6 6.5 221 116-340 100-328 (329)
366 3sb4_A Hypothetical leucine ri 99.8 2.8E-19 9.6E-24 194.3 8.8 218 140-361 100-325 (329)
367 3e6j_A Variable lymphocyte rec 99.8 4.2E-18 1.4E-22 174.4 16.5 134 69-203 40-173 (229)
368 1xeu_A Internalin C; cellular 99.8 1.6E-19 5.4E-24 189.0 5.9 169 20-203 18-186 (263)
369 1xeu_A Internalin C; cellular 99.8 7.8E-19 2.7E-23 183.8 11.0 165 2-181 24-188 (263)
370 4ezg_A Putative uncharacterize 99.8 1.1E-18 3.7E-23 174.4 11.3 154 41-202 40-194 (197)
371 4ezg_A Putative uncharacterize 99.8 2E-18 7E-23 172.3 11.7 154 65-226 40-194 (197)
372 1dce_A Protein (RAB geranylger 99.8 4.1E-21 1.4E-25 222.8 -9.9 187 18-227 346-547 (567)
373 1w8a_A SLIT protein; signaling 99.7 2.8E-18 9.4E-23 170.4 10.8 133 408-543 11-144 (192)
374 1dce_A Protein (RAB geranylger 99.7 4.7E-21 1.6E-25 222.2 -12.0 203 67-292 347-567 (567)
375 4fdw_A Leucine rich hypothetic 99.7 6.3E-17 2.1E-21 179.3 20.2 265 92-369 112-382 (401)
376 1zth_A RIO1 serine protein kin 99.7 5.1E-18 1.7E-22 177.0 10.8 141 648-803 49-220 (258)
377 4fdw_A Leucine rich hypothetic 99.7 9.2E-17 3.1E-21 178.0 20.9 267 115-394 111-383 (401)
378 1w8a_A SLIT protein; signaling 99.7 8.6E-18 2.9E-22 166.9 9.9 129 361-492 12-141 (192)
379 4b8c_D Glucose-repressible alc 99.7 2.7E-18 9.2E-23 205.6 6.3 218 21-250 173-404 (727)
380 2wfh_A SLIT homolog 2 protein 99.7 2.8E-17 9.5E-22 163.0 12.3 132 408-543 13-144 (193)
381 4fs7_A Uncharacterized protein 99.7 2.4E-16 8.1E-21 175.8 20.6 136 105-246 59-194 (394)
382 4b8c_D Glucose-repressible alc 99.7 3.3E-18 1.1E-22 204.8 5.4 141 374-518 217-358 (727)
383 4fs7_A Uncharacterized protein 99.7 4.4E-16 1.5E-20 173.6 21.5 335 80-481 58-392 (394)
384 2o6r_A Variable lymphocyte rec 99.7 1.1E-16 3.7E-21 156.8 12.2 133 408-543 10-142 (177)
385 2ell_A Acidic leucine-rich nuc 99.7 7.4E-17 2.5E-21 156.5 10.7 130 407-538 26-160 (168)
386 2ell_A Acidic leucine-rich nuc 99.7 9.7E-17 3.3E-21 155.7 11.1 135 380-516 23-162 (168)
387 2je0_A Acidic leucine-rich nuc 99.7 1.1E-16 3.7E-21 151.9 9.0 128 405-534 17-149 (149)
388 2je0_A Acidic leucine-rich nuc 99.6 2E-16 6.9E-21 150.0 7.7 128 381-510 17-149 (149)
389 2o6r_A Variable lymphocyte rec 99.6 9.8E-16 3.3E-20 150.0 12.4 132 384-518 10-141 (177)
390 4gyi_A RIO2 kinase; protein ki 99.6 3.6E-16 1.2E-20 168.4 9.9 149 643-803 92-266 (397)
391 2wfh_A SLIT homolog 2 protein 99.6 1.8E-15 6E-20 150.0 14.1 127 24-154 13-139 (193)
392 1a9n_A U2A', U2A'; complex (nu 99.6 7.6E-16 2.6E-20 150.5 7.0 106 430-538 43-153 (176)
393 1ds9_A Outer arm dynein; leuci 99.6 3E-17 1E-21 163.9 -3.9 151 382-539 19-186 (198)
394 3g39_A Variable lymphocyte rec 99.6 4.1E-15 1.4E-19 144.1 10.6 111 430-543 10-120 (170)
395 1a9n_A U2A', U2A'; complex (nu 99.6 2E-15 6.7E-20 147.6 7.3 134 376-515 14-154 (176)
396 1ds9_A Outer arm dynein; leuci 99.6 1.1E-16 3.7E-21 159.9 -3.3 156 353-515 14-186 (198)
397 4gt6_A Cell surface protein; l 99.6 1.3E-13 4.5E-18 153.5 21.1 108 422-535 281-388 (394)
398 2r9u_A Variable lymphocyte rec 99.5 1.3E-14 4.4E-19 141.1 10.6 108 432-542 15-122 (174)
399 4gt6_A Cell surface protein; l 99.5 3.4E-13 1.2E-17 150.1 22.2 336 105-513 51-390 (394)
400 3g39_A Variable lymphocyte rec 99.5 7.1E-14 2.4E-18 135.3 10.8 106 408-516 12-117 (170)
401 2r9u_A Variable lymphocyte rec 99.5 1.8E-13 6.3E-18 132.9 10.8 87 429-515 33-119 (174)
402 3un9_A NLR family member X1; l 99.3 1.2E-14 4E-19 159.5 -6.9 141 381-521 101-259 (372)
403 2ifg_A High affinity nerve gro 99.3 7.8E-13 2.7E-17 144.7 7.5 90 425-515 27-117 (347)
404 2ifg_A High affinity nerve gro 99.3 1.2E-12 4.1E-17 143.2 8.9 108 432-542 11-120 (347)
405 3un9_A NLR family member X1; l 99.3 3.7E-14 1.3E-18 155.5 -3.6 159 381-539 72-253 (372)
406 4h09_A Hypothetical leucine ri 99.3 6.4E-11 2.2E-15 131.1 22.0 316 88-453 41-356 (379)
407 4h09_A Hypothetical leucine ri 99.3 8.1E-11 2.8E-15 130.3 21.3 152 323-479 207-358 (379)
408 3tm0_A Aminoglycoside 3'-phosp 99.2 6.8E-11 2.3E-15 123.6 11.1 146 642-800 10-212 (263)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 5.2E-10 1.8E-14 116.7 9.5 137 647-801 21-214 (264)
410 2ra8_A Uncharacterized protein 98.9 1.7E-10 6E-15 125.0 1.8 83 164-248 251-341 (362)
411 3dxp_A Putative acyl-COA dehyd 98.9 3.3E-09 1.1E-13 116.3 11.5 144 650-802 42-249 (359)
412 2ra8_A Uncharacterized protein 98.9 3.7E-10 1.3E-14 122.5 2.2 83 88-173 134-227 (362)
413 3sg8_A APH(2'')-ID; antibiotic 98.8 2.3E-09 7.7E-14 114.5 4.2 182 651-851 25-286 (304)
414 1io0_A Tropomodulin; LRR prote 98.6 8.8E-09 3E-13 100.7 1.1 113 426-538 33-164 (185)
415 3rw6_A Nuclear RNA export fact 98.5 1.2E-08 4.3E-13 104.5 1.0 105 425-531 137-257 (267)
416 3r70_A Aminoglycoside phosphot 98.5 3.4E-07 1.2E-11 98.2 11.6 138 647-803 38-239 (320)
417 1io0_A Tropomodulin; LRR prote 98.4 1.8E-08 6E-13 98.5 -1.1 120 376-515 31-165 (185)
418 3rw6_A Nuclear RNA export fact 98.4 1.1E-07 3.9E-12 97.3 2.8 94 449-544 137-239 (267)
419 3d1u_A Putative fructosamine-3 98.3 2.6E-06 8.8E-11 89.3 12.2 78 649-734 18-98 (288)
420 4gkh_A Aminoglycoside 3'-phosp 98.3 1.8E-06 6.3E-11 90.1 9.4 135 653-801 31-223 (272)
421 3tdw_A Gentamicin resistance p 98.2 4.3E-06 1.5E-10 88.8 11.4 138 651-803 24-226 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 8.4E-06 2.9E-10 88.6 11.3 147 647-803 42-245 (362)
423 3ats_A Putative uncharacterize 98.0 1.2E-05 4E-10 87.7 9.5 84 651-735 25-122 (357)
424 3e4g_A ATP synthase subunit S, 97.9 1.7E-06 5.7E-11 82.0 1.1 82 47-128 63-150 (176)
425 3e4g_A ATP synthase subunit S, 97.9 3.8E-06 1.3E-10 79.5 2.5 84 429-512 61-150 (176)
426 2olc_A MTR kinase, methylthior 97.9 5.1E-05 1.8E-09 83.9 12.0 79 651-731 35-120 (397)
427 2q83_A YTAA protein; 2635576, 97.8 4.8E-05 1.7E-09 82.3 9.9 141 652-801 38-252 (346)
428 1pgv_A TMD-1, tropomodulin TMD 97.7 9.5E-06 3.2E-10 78.4 1.4 108 429-536 41-168 (197)
429 3jr1_A Putative fructosamine-3 97.6 0.00023 7.8E-09 75.1 11.8 140 649-797 39-232 (312)
430 3rfe_A Platelet glycoprotein I 97.5 0.00012 4E-09 66.2 6.3 60 481-542 12-72 (130)
431 3f7w_A Putative fructosamine-3 97.5 0.00039 1.3E-08 72.9 10.7 80 646-733 15-97 (288)
432 2pyw_A Uncharacterized protein 97.5 0.00064 2.2E-08 75.6 12.9 76 771-848 232-312 (420)
433 1pgv_A TMD-1, tropomodulin TMD 97.4 2.1E-05 7.1E-10 76.0 -0.2 87 427-513 68-169 (197)
434 3rfe_A Platelet glycoprotein I 97.2 0.00029 9.8E-09 63.6 5.5 62 289-352 12-74 (130)
435 1zyl_A Hypothetical protein YI 97.1 0.0048 1.6E-07 65.9 13.7 144 651-802 31-224 (328)
436 3csv_A Aminoglycoside phosphot 97.1 0.0017 5.7E-08 69.7 10.1 143 652-803 24-219 (333)
437 2ppq_A HSK, HK, homoserine kin 97.0 0.0027 9.3E-08 67.6 11.5 159 636-801 7-217 (322)
438 3dxq_A Choline/ethanolamine ki 97.0 0.0022 7.5E-08 67.6 10.1 140 650-802 22-203 (301)
439 3feg_A Choline/ethanolamine ki 96.7 0.0048 1.7E-07 66.8 10.4 141 652-801 56-254 (379)
440 1nw1_A Choline kinase (49.2 KD 96.7 0.0037 1.3E-07 69.3 9.7 73 651-733 78-159 (429)
441 2yle_A Protein spire homolog 1 96.6 0.0081 2.8E-07 58.1 9.3 103 731-851 33-135 (229)
442 2qg7_A Ethanolamine kinase PV0 96.5 0.0089 3E-07 66.5 11.0 74 651-733 113-188 (458)
443 3c5i_A Choline kinase; choline 96.2 0.0071 2.4E-07 65.8 7.7 73 652-733 39-121 (369)
444 3i1a_A Spectinomycin phosphotr 96.1 0.029 9.9E-07 60.0 12.1 32 771-802 206-237 (339)
445 3f2s_A CK, chetk-alpha, cholin 95.3 0.056 1.9E-06 58.6 10.0 146 652-801 58-280 (401)
446 3mes_A Choline kinase; malaria 94.7 0.11 3.9E-06 56.8 10.7 140 652-801 76-291 (424)
447 2l2t_A Receptor tyrosine-prote 92.3 0.082 2.8E-06 36.2 2.6 28 585-612 12-39 (44)
448 2ks1_B Epidermal growth factor 91.9 0.11 3.7E-06 35.7 2.8 27 585-611 13-39 (44)
449 3g15_A CK, chetk-alpha, cholin 89.6 0.17 5.9E-06 55.3 3.5 29 773-801 246-280 (401)
450 2jwa_A Receptor tyrosine-prote 87.0 0.34 1.2E-05 33.1 2.2 6 586-591 15-20 (44)
451 4ann_A ESSB; membrane protein, 82.7 1.2 4.1E-05 43.1 4.8 116 704-853 43-158 (215)
452 4ano_A ESSB; membrane protein, 82.5 2 6.8E-05 41.7 6.2 114 704-853 48-163 (219)
453 2k1k_A Ephrin type-A receptor 74.6 1.9 6.4E-05 28.6 2.3 22 588-609 16-37 (38)
454 2lz0_A Uncharacterized protein 65.8 13 0.00043 31.0 6.3 41 156-197 11-51 (100)
455 3cxl_A N-chimerin; SH2, RHO-GA 65.2 0.69 2.4E-05 51.4 -2.3 60 651-715 147-213 (463)
456 2lz0_A Uncharacterized protein 62.8 18 0.00062 30.0 6.6 47 176-223 7-53 (100)
457 2k9y_A Ephrin type-A receptor 61.3 4.5 0.00015 27.3 2.1 7 603-609 33-39 (41)
458 1iij_A ERBB-2 receptor protein 58.2 3.5 0.00012 26.6 1.0 23 586-609 11-33 (35)
459 2ks1_B Epidermal growth factor 47.9 10 0.00035 26.0 2.1 31 582-612 13-43 (44)
460 2l2t_A Receptor tyrosine-prote 40.6 25 0.00084 24.1 3.1 32 582-613 12-43 (44)
461 1zza_A Stannin, AG8_1; helix, 35.3 17 0.00057 27.3 1.7 22 591-612 23-44 (90)
462 2knc_A Integrin alpha-IIB; tra 29.9 39 0.0013 24.3 2.8 11 582-592 13-23 (54)
463 2l9u_A Receptor tyrosine-prote 29.6 28 0.00095 21.9 1.7 10 600-609 23-32 (40)
464 2l6w_A Beta-type platelet-deri 35.6 11 0.00039 24.6 0.0 9 602-610 27-35 (39)
465 2klu_A T-cell surface glycopro 21.1 79 0.0027 23.5 3.1 26 589-614 13-38 (70)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.8e-72 Score=685.43 Aligned_cols=564 Identities=30% Similarity=0.448 Sum_probs=429.1
Q ss_pred ccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCc--cccCCCCCCEEEcccccccccCCCCc-CCCCCCCEEEcccc
Q 044366 3 NLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPP--EIGKLNQLRRLYLDVNQLHGTIPPVI-GQLSLINELVFCHN 79 (918)
Q Consensus 3 ~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~--~l~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~l~~n 79 (918)
++++|++. .+|+.++++++|++|||++|++++.+|. .++.+++|++|+|++|.+++.+|..+ ..+++|++|++++|
T Consensus 83 ~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 83 FLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp ECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred CCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 34444443 3445666666666666666666655555 66666666666666666665555544 55666666666666
Q ss_pred cccccCCcc---ccCC----------------------CCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCC
Q 044366 80 NVSGRIPSS---LGNL----------------------SNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIP 134 (918)
Q Consensus 80 ~~~~~~p~~---l~~l----------------------~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~ 134 (918)
.+++..|.. +.++ ++|++|+|++|++.+..|. +.++++|++|+|++|++++..|
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~ 240 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFS 240 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHH
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCccc
Confidence 665555444 4444 4455555555554444443 5555555555555555554445
Q ss_pred cCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCC-CCCcEeeccCcccccCCCccccCCC
Q 044366 135 CSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNL-SSLTVMSLFNNSLSGSIPPILGNLK 213 (918)
Q Consensus 135 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~ 213 (918)
..++++++|++|++++|++++..|.. .+++|++|++++|++++.+|..+... ++|++|+|++|.+++..|..|.+++
T Consensus 241 ~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~ 318 (768)
T 3rgz_A 241 RAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 318 (768)
T ss_dssp HHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCT
T ss_pred HHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCC
Confidence 55555555555555555555443332 45555555555555554555555443 6777777777777666677777777
Q ss_pred CcceeecccccccCCCCCC-CcCCCcCCeEEcccCcCcCCCCccccccC-CCCeEecCCCccCCcCCCcCCC--CCCCcE
Q 044366 214 SLSTLGLHINQLNGVIPPS-IGNLSSLRNLSLFNNRLYGFVPKEIGYLK-SLSKLEFCANHLSGVIPHSVGN--LTGLVL 289 (918)
Q Consensus 214 ~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~--l~~L~~ 289 (918)
+|++|++++|++++.+|.. +..+++|++|++++|++++..|..+..++ +|+.|++++|++.+..|..+.. +++|+.
T Consensus 319 ~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~ 398 (768)
T 3rgz_A 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 398 (768)
T ss_dssp TCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCE
T ss_pred CccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccE
Confidence 7777777777776555544 66777777777777777766666666666 7777777777777666666665 778889
Q ss_pred EEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCcccccccccceeecccccc
Q 044366 290 LNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNI 369 (918)
Q Consensus 290 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i 369 (918)
|++++|++++.+|..+.++++|++|++++|.+....+..|..+++|+.|++++|.+.......+..++.|+.|++++|++
T Consensus 399 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 478 (768)
T 3rgz_A 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478 (768)
T ss_dssp EECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred EECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcc
Confidence 99999998888999999999999999999999988888999999999999999999888888888999999999999999
Q ss_pred ccCCCcCcCCCCCCcEEEccCceeccccccchhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccc-
Q 044366 370 YGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMS- 448 (918)
Q Consensus 370 ~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~- 448 (918)
.+.+|..+..+++|++|+|++|++.+.+|.++..+++|+.|+|++|++++.+|..+..+++|++|+|++|.+++.+|..
T Consensus 479 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~ 558 (768)
T 3rgz_A 479 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGG
T ss_pred cCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988766643
Q ss_pred ---------------------------------------------------------------------cccccccceec
Q 044366 449 ---------------------------------------------------------------------IGNLLKLHYLN 459 (918)
Q Consensus 449 ---------------------------------------------------------------------~~~l~~L~~L~ 459 (918)
|..+++|+.||
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~Ld 638 (768)
T 3rgz_A 559 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638 (768)
T ss_dssp GTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEE
T ss_pred hcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEE
Confidence 33457899999
Q ss_pred ccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCC
Q 044366 460 LSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQG 539 (918)
Q Consensus 460 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 539 (918)
|++|++++.+|..|+.+++|+.|+|++|++++.+|..|+.+++|+.|||++|++++.+|..+..+++|++||+++|+++|
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 718 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEE
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcc---cccccccCCCCccCCCCCCCCCCccC
Q 044366 540 PIPNSTA---FKNGLMEGNKGLCGNFKALPSCDAFT 572 (918)
Q Consensus 540 ~~p~~~~---~~~~~~~~n~~~c~~~~~~~~c~~~~ 572 (918)
.+|...+ +....+.||+++||.+. ++|....
T Consensus 719 ~iP~~~~~~~~~~~~~~gN~~Lcg~~l--~~C~~~~ 752 (768)
T 3rgz_A 719 PIPEMGQFETFPPAKFLNNPGLCGYPL--PRCDPSN 752 (768)
T ss_dssp ECCSSSSGGGSCGGGGCSCTEEESTTS--CCCCSCC
T ss_pred cCCCchhhccCCHHHhcCCchhcCCCC--cCCCCCc
Confidence 9998765 45567999999999874 4886543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.2e-67 Score=643.10 Aligned_cols=539 Identities=31% Similarity=0.435 Sum_probs=416.7
Q ss_pred CcccCCCCCCcc---CCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCC--CcCCCCCCCEEE
Q 044366 1 MLNLGFNLLFGN---IPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPP--VIGQLSLINELV 75 (918)
Q Consensus 1 ~l~~~~~~~~~~---~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~ 75 (918)
.|+|+++++.|. +|+.++++++|+.++++.+.+. .+|..|+.+++|++|+|++|.+++.+|. .++.+++|++|+
T Consensus 54 ~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~ 132 (768)
T 3rgz_A 54 SIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLN 132 (768)
T ss_dssp EEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEE
T ss_pred EEECCCCCcCCccCccChhHhccCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEE
Confidence 379999999999 9999999999999999999997 6789999999999999999999998999 999999999999
Q ss_pred cccccccccCCccc-cCCCCCCEEEccCCcccccCccc---cCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeecccc
Q 044366 76 FCHNNVSGRIPSSL-GNLSNLALLYLNDNSLFGSIPIV---MGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKN 151 (918)
Q Consensus 76 l~~n~~~~~~p~~l-~~l~~L~~L~L~~n~i~~~~~~~---~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n 151 (918)
+++|.+.+..|..+ .++++|++|+|++|++++..|.. +.++++|++|++++|++++..| +..+++|++|+|++|
T Consensus 133 Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 210 (768)
T 3rgz_A 133 VSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSN 210 (768)
T ss_dssp CCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB--CTTCTTCCEEECCSS
T ss_pred CcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCC--cccCCcCCEEECcCC
Confidence 99999998888876 89999999999999999887766 6677777777777777665433 256666666666666
Q ss_pred ccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCC
Q 044366 152 SLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPP 231 (918)
Q Consensus 152 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 231 (918)
++++.+|. |+.+++|++|++++|++++..|..+..+++|++|++++|.+++..|.. .+++|++|++++|++++.+|.
T Consensus 211 ~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~ 287 (768)
T 3rgz_A 211 NFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPD 287 (768)
T ss_dssp CCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCC
T ss_pred cCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCH
Confidence 66655554 666666666666666666655666666666666666666665444432 445555555555555544444
Q ss_pred CCcCC-CcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccC-------------------------CcCCCcCCCCC
Q 044366 232 SIGNL-SSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLS-------------------------GVIPHSVGNLT 285 (918)
Q Consensus 232 ~~~~l-~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-------------------------~~~~~~~~~l~ 285 (918)
.+... ++|++|++++|.+++..|..++.+++|++|++++|.+. +..|..+..++
T Consensus 288 ~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~ 367 (768)
T 3rgz_A 288 FLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLS 367 (768)
T ss_dssp CSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHT
T ss_pred HHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhh
Confidence 44332 45555555555554444444555555555555555544 44444444443
Q ss_pred -CCcEEEccCCcCcCCCCccccC--CCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCccccccccccee
Q 044366 286 -GLVLLNMCENHLFGPIPKSLRN--LTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTF 362 (918)
Q Consensus 286 -~L~~L~l~~n~l~~~~~~~l~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 362 (918)
+|+.|++++|++.+.+|..+.. +++|++|++++|.+....+..|..+++|++|++++|.++......+..+++|+.|
T Consensus 368 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 447 (768)
T 3rgz_A 368 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447 (768)
T ss_dssp TTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEE
T ss_pred cCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEE
Confidence 4555555555554444444444 5667777777777776777778888888888888888887777778888889999
Q ss_pred eccccccccCCCcCcCCCCCCcEEEccCceeccccccchhhccccCceecccccccCCCCCCCCCCCcccEEeccCcccc
Q 044366 363 NASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLS 442 (918)
Q Consensus 363 ~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 442 (918)
++++|.+.+.+|..+..+++|++|+|++|++.+..|..+.++++|+.|+|++|++++.+|.+++.+++|++|+|++|.++
T Consensus 448 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 527 (768)
T 3rgz_A 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527 (768)
T ss_dssp ECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCE
T ss_pred ECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCccc
Confidence 99999998888888888999999999999998888999999999999999999998888999999999999999999999
Q ss_pred ccCccccccccccceecccCcccCCCCchhh-------------------------------------------------
Q 044366 443 SSIPMSIGNLLKLHYLNLSNNQFSHKIPTEF------------------------------------------------- 473 (918)
Q Consensus 443 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~------------------------------------------------- 473 (918)
+.+|..+..+++|++|+|++|++++.+|..+
T Consensus 528 ~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 607 (768)
T 3rgz_A 528 GNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRL 607 (768)
T ss_dssp EECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGG
T ss_pred CcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcc
Confidence 8889999999999999999999887766543
Q ss_pred ---------------------ccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEc
Q 044366 474 ---------------------EKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDI 532 (918)
Q Consensus 474 ---------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l 532 (918)
..+++|+.|||++|++++.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|||
T Consensus 608 ~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdL 687 (768)
T 3rgz_A 608 STRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDL 687 (768)
T ss_dssp GGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred ccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEEC
Confidence 33567889999999999999999999999999999999999999999999999999999
Q ss_pred cCCcCCCCCCCCc
Q 044366 533 SYNELQGPIPNST 545 (918)
Q Consensus 533 ~~N~l~~~~p~~~ 545 (918)
++|+++|.+|..-
T Consensus 688 s~N~l~g~ip~~l 700 (768)
T 3rgz_A 688 SSNKLDGRIPQAM 700 (768)
T ss_dssp CSSCCEECCCGGG
T ss_pred CCCcccCcCChHH
Confidence 9999999998753
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.2e-62 Score=594.20 Aligned_cols=537 Identities=25% Similarity=0.261 Sum_probs=275.2
Q ss_pred ccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEccccccc
Q 044366 3 NLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVS 82 (918)
Q Consensus 3 ~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~ 82 (918)
+.++++++ .+|..+. +++++|+|++|++++..+.+|+++++|++|+|++|++++..|..++.+++|++|++++|.++
T Consensus 10 ~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 86 (680)
T 1ziw_A 10 DCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 86 (680)
T ss_dssp ECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCC
T ss_pred ECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccC
Confidence 44444444 4554433 45555555555555444444555555555555555555444555555555555555555555
Q ss_pred ccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccc
Q 044366 83 GRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIG 162 (918)
Q Consensus 83 ~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~ 162 (918)
+..+..|+++++|++|+|++|++.+..|..|+++++|++|+|++|.+++..|..++++++|++|++++|.+++..+..+.
T Consensus 87 ~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 166 (680)
T 1ziw_A 87 QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELD 166 (680)
T ss_dssp CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHG
T ss_pred ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhh
Confidence 33333455555555555555555544445555555555555555555554555555555555555555555544444333
Q ss_pred --cccccCeeeccccccCCcCCccCCCC---------------------------CCCcEeeccCcccccCCCccccCCC
Q 044366 163 --NLKSLLQLDLSENRLSGLIPLSLSNL---------------------------SSLTVMSLFNNSLSGSIPPILGNLK 213 (918)
Q Consensus 163 --~l~~L~~L~Ls~N~l~~~~~~~~~~l---------------------------~~L~~L~L~~N~l~~~~~~~~~~l~ 213 (918)
.+++|++|++++|++++..+..|..+ ++|+.|++++|.+++..|..|.+++
T Consensus 167 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~ 246 (680)
T 1ziw_A 167 IFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLK 246 (680)
T ss_dssp GGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGG
T ss_pred ccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccC
Confidence 23455555555555554444433322 3344455555555544455555443
Q ss_pred C--cceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCC---------cCCCcCC
Q 044366 214 S--LSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSG---------VIPHSVG 282 (918)
Q Consensus 214 ~--L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---------~~~~~~~ 282 (918)
. |++|++++|++++..+..|..+++|++|++++|++.+..+..+..+++|+.|++++|...+ +....|.
T Consensus 247 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~ 326 (680)
T 1ziw_A 247 WTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQ 326 (680)
T ss_dssp GSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTT
T ss_pred cCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcc
Confidence 3 5555555555555444555555555555555555555545455555555555554443221 1111344
Q ss_pred CCCCCcEEEccCCcCcCCCCccccCCCCCC----------------------------eEEeecccccCccccccCCCCC
Q 044366 283 NLTGLVLLNMCENHLFGPIPKSLRNLTSLE----------------------------RVRFNQNNLYGKVYEAFGDHPN 334 (918)
Q Consensus 283 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~----------------------------~L~l~~n~l~~~~~~~~~~l~~ 334 (918)
.+++|+.|++++|++.+..+..|.++++|+ .|++++|.+..+.+..|..+++
T Consensus 327 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~ 406 (680)
T 1ziw_A 327 WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGH 406 (680)
T ss_dssp TCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTT
T ss_pred cCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCC
Confidence 444555555555555444444444444444 4555555555555555555555
Q ss_pred ccEEeCCCCcccc-ccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceec--cccccchhhccccCcee
Q 044366 335 LTFLDLSQNNFYC-EISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIF--GKIPVQLVKLFSLNKLI 411 (918)
Q Consensus 335 L~~L~Ls~N~l~~-~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~ 411 (918)
|+.|++++|.+.. +....|.+++.|+.|++++|.+.+..+..|..+++|+.|++++|.+. +..|..|.++++|+.|+
T Consensus 407 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~ 486 (680)
T 1ziw_A 407 LEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILD 486 (680)
T ss_dssp CCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEE
T ss_pred CCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEE
Confidence 5555555555543 22244555555555555555555555555555555555555555554 33455555555555555
Q ss_pred cccccccCCCCCCCCCCCcccEEeccCccccccCc--------cccccccccceecccCcccCCCCchhhccccccceEe
Q 044366 412 LSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIP--------MSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELD 483 (918)
Q Consensus 412 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 483 (918)
|++|++++..+..|..+++|++|+|++|.+++..+ ..|.++++|+.|+|++|+|+.+.+..|.++++|+.|+
T Consensus 487 Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 566 (680)
T 1ziw_A 487 LSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIID 566 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeE
Confidence 55555555555555555555555555555553211 1244555555555555555544444555555555555
Q ss_pred ccCCcCCCCCchhccccCCcceEecCCCcccccCccccc-CCCCccEEEccCCcCCCCCC
Q 044366 484 LSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFE-EMRSLSWIDISYNELQGPIP 542 (918)
Q Consensus 484 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~l~l~~N~l~~~~p 542 (918)
|++|+|++..+..|..+++|+.|+|++|+|+++.+..|. .+++|+.|++++|+|.|.++
T Consensus 567 Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 567 LGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 555555554444455555555555555555555555554 45555555555555555554
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.5e-62 Score=590.08 Aligned_cols=534 Identities=23% Similarity=0.224 Sum_probs=429.6
Q ss_pred CEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCC
Q 044366 24 QYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDN 103 (918)
Q Consensus 24 ~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n 103 (918)
+.+|.++++++ .+|..+. +++++|+|++|++++..+..|..+++|++|++++|.+++..|..|+++++|++|+|++|
T Consensus 7 ~~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 7 EVADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp SEEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred CeeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 68999999998 7888776 79999999999999766678999999999999999999988999999999999999999
Q ss_pred cccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCc
Q 044366 104 SLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPL 183 (918)
Q Consensus 104 ~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 183 (918)
++++..+..|+++++|++|+|++|++++..|..|+++++|++|++++|.+++..+..|+++++|++|++++|++++..+.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99977777899999999999999999988888999999999999999999999999999999999999999999988776
Q ss_pred cCC--CCCCCcEeeccCcccccCCCccccCC---------------------------CCcceeecccccccCCCCCCCc
Q 044366 184 SLS--NLSSLTVMSLFNNSLSGSIPPILGNL---------------------------KSLSTLGLHINQLNGVIPPSIG 234 (918)
Q Consensus 184 ~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l---------------------------~~L~~L~L~~n~l~~~~~~~~~ 234 (918)
.+. .+++|++|++++|.+++..|..|..+ ++|+.|++++|.+++..+..|.
T Consensus 164 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~ 243 (680)
T 1ziw_A 164 ELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFL 243 (680)
T ss_dssp HHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTG
T ss_pred HhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhh
Confidence 654 56899999999999998888877654 5678888899999988889998
Q ss_pred CCCc--CCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcC-----CCC----c
Q 044366 235 NLSS--LRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFG-----PIP----K 303 (918)
Q Consensus 235 ~l~~--L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-----~~~----~ 303 (918)
+++. |+.|++++|++++..+..|..+++|++|++++|++.+..|..|.++++|+.|++++|...+ .+| .
T Consensus 244 ~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~ 323 (680)
T 1ziw_A 244 GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDF 323 (680)
T ss_dssp GGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTT
T ss_pred ccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChh
Confidence 8865 9999999999999999999999999999999999999999999999999999999876543 233 3
Q ss_pred cccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccc----------------------------cccCccccc
Q 044366 304 SLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFY----------------------------CEISFNWRN 355 (918)
Q Consensus 304 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~----------------------------~~~~~~~~~ 355 (918)
.|..+++|++|++++|.+..+.+..|..+++|++|++++|.+. .+....|..
T Consensus 324 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 403 (680)
T 1ziw_A 324 SFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSW 403 (680)
T ss_dssp TTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTT
T ss_pred hcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhC
Confidence 7889999999999999999999999999999988888887632 222233344
Q ss_pred ccccceeeccccccccCCC-cCcCCCCCCcEEEccCceeccccccchhhccccCceeccccccc--CCCCCCCCCCCccc
Q 044366 356 FSKLGTFNASMNNIYGSIP-PEIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLF--GGVPLEFGTLTELQ 432 (918)
Q Consensus 356 ~~~L~~l~l~~n~i~~~~~-~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~ 432 (918)
+++|+.|++++|.+.+.+| ..|..+++|++|++++|++.+..+..|..+++|+.|++++|++. +..|..|..+++|+
T Consensus 404 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~ 483 (680)
T 1ziw_A 404 LGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT 483 (680)
T ss_dssp CTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCC
T ss_pred CCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCC
Confidence 4444445555444443333 34444455555555555554444445555555555555555544 34566677778888
Q ss_pred EEeccCccccccCccccccccccceecccCcccCCCCc--------hhhccccccceEeccCCcCCCCCchhccccCCcc
Q 044366 433 YLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIP--------TEFEKLIHLSELDLSHNILQEEIPPQICKMESLE 504 (918)
Q Consensus 433 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 504 (918)
+|+|++|.|+++.+..|..+++|++|+|++|++++..+ ..|.++++|++|+|++|+|+.+.+..|.++++|+
T Consensus 484 ~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 563 (680)
T 1ziw_A 484 ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELK 563 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred EEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcc
Confidence 88888888887777778888888888888888765422 2367788888888888888765556788888888
Q ss_pred eEecCCCcccccCcccccCCCCccEEEccCCcCCCCCCCCc-----ccccccccCCCCccC
Q 044366 505 KLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPNST-----AFKNGLMEGNKGLCG 560 (918)
Q Consensus 505 ~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~-----~~~~~~~~~n~~~c~ 560 (918)
.|+|++|+++++.+..|..+++|+.|++++|++++..|... ....-...+|++.|.
T Consensus 564 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 564 IIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred eeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 88888888888888888888888888888888887665421 122234678888884
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.6e-60 Score=566.01 Aligned_cols=533 Identities=22% Similarity=0.237 Sum_probs=471.9
Q ss_pred cccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccc
Q 044366 2 LNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNV 81 (918)
Q Consensus 2 l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~ 81 (918)
++.++.+++ .+|..+.. .+++|+|++|++++..|.+|+++++|++|+|++|++++..|..|+++++|++|++++|.+
T Consensus 17 ~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 17 YNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp EECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 456666777 88887654 799999999999988899999999999999999999988899999999999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCccc
Q 044366 82 SGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVI 161 (918)
Q Consensus 82 ~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~ 161 (918)
++..|..|+++++|++|++++|++++..|..|.++++|++|++++|++++..+..+.++++|++|++++|.+++..+..|
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 98889999999999999999999998778899999999999999999997555566669999999999999998888899
Q ss_pred ccccccC--eeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeeccccccc-----CCCCCCCc
Q 044366 162 GNLKSLL--QLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLN-----GVIPPSIG 234 (918)
Q Consensus 162 ~~l~~L~--~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-----~~~~~~~~ 234 (918)
+.+++|+ .|++++|.+++..|..|.. .+|+.|++++|.. .+..+..+.++....+..+.+. .+.+..|.
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~---~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~ 249 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQN---LLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFE 249 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSC---HHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGG
T ss_pred hhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchh---HHHHhhhccccchhheechhhccccccccChhHhc
Confidence 9999999 8999999999888877655 6899999999872 3455555555554444333222 22233344
Q ss_pred CCC--cCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCC
Q 044366 235 NLS--SLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLE 312 (918)
Q Consensus 235 ~l~--~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 312 (918)
++. +|+.|++++|.++++.+..|..+++|++|++++|++. ..|..+..+++|+.|++++|++.+..|..+.++++|+
T Consensus 250 ~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 328 (606)
T 3t6q_A 250 GLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLT 328 (606)
T ss_dssp GGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCS
T ss_pred hhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCC
Confidence 443 7899999999999988888999999999999999998 5677889999999999999999988899999999999
Q ss_pred eEEeeccccc-CccccccCCCCCccEEeCCCCcccccc--CcccccccccceeeccccccccCCCcCcCCCCCCcEEEcc
Q 044366 313 RVRFNQNNLY-GKVYEAFGDHPNLTFLDLSQNNFYCEI--SFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLS 389 (918)
Q Consensus 313 ~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~ 389 (918)
+|++++|.+. .++...|..+++|++|++++|.+.... ...+..+++|+.|++++|.+.+..|..|..+++|+.|+++
T Consensus 329 ~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 408 (606)
T 3t6q_A 329 HLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLA 408 (606)
T ss_dssp EEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECT
T ss_pred EEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECC
Confidence 9999999987 566777999999999999999998776 6678899999999999999999999999999999999999
Q ss_pred Cceeccccccc-hhhccccCceecccccccCCCCCCCCCCCcccEEeccCcccccc---CccccccccccceecccCccc
Q 044366 390 SNHIFGKIPVQ-LVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSS---IPMSIGNLLKLHYLNLSNNQF 465 (918)
Q Consensus 390 ~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l 465 (918)
+|++.+..+.. +..+++|+.|++++|++.+..+..+..+++|++|+|++|.+++. .+..+..+++|++|+|++|++
T Consensus 409 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l 488 (606)
T 3t6q_A 409 FTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDL 488 (606)
T ss_dssp TCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCC
T ss_pred CCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCcc
Confidence 99998776654 89999999999999999999999999999999999999999862 336789999999999999999
Q ss_pred CCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCCC
Q 044366 466 SHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPN 543 (918)
Q Consensus 466 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 543 (918)
++..|..|..+++|++|+|++|++++..|..|..++.| .|+|++|++++..|..|..+++|+.|++++|+|+|.++.
T Consensus 489 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 489 SSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred CccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 99999999999999999999999999999999999999 999999999999999999999999999999999998874
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2e-59 Score=576.47 Aligned_cols=524 Identities=23% Similarity=0.204 Sum_probs=464.0
Q ss_pred cccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccC-CCCcCCCCCCCEEEccccc
Q 044366 2 LNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTI-PPVIGQLSLINELVFCHNN 80 (918)
Q Consensus 2 l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~l~~n~ 80 (918)
.|.++++++ .+|. -.++|++|||++|+|++..|.+|..+++|++|+|++|...+.+ |..|+.+++|++|++++|.
T Consensus 9 ~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~ 84 (844)
T 3j0a_A 9 AFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84 (844)
T ss_dssp EEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCC
T ss_pred EEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCc
Confidence 466788888 8887 4689999999999999888999999999999999999665565 8899999999999999999
Q ss_pred ccccCCccccCCCCCCEEEccCCcccccCccc--cCCCCCCCEEECcCCcCCCcCC-cCCCCCCCCceeeccccccccCC
Q 044366 81 VSGRIPSSLGNLSNLALLYLNDNSLFGSIPIV--MGNLKSLSTLDLSQNQLNGSIP-CSLDNLSNLDTLFLYKNSLSGPI 157 (918)
Q Consensus 81 ~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~--~~~l~~L~~L~Ls~n~i~~~~~-~~l~~l~~L~~L~L~~n~l~~~~ 157 (918)
+.+..|.+|.++++|++|+|++|.+.+..|.. |.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..
T Consensus 85 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~ 164 (844)
T 3j0a_A 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVC 164 (844)
T ss_dssp CCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCC
T ss_pred CcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeC
Confidence 99999999999999999999999998766654 9999999999999999987655 57999999999999999999999
Q ss_pred Ccccccc--cccCeeeccccccCCcCCccCCCCCC------CcEeeccCcccccCCCccccCC---CCcceeeccc----
Q 044366 158 PSVIGNL--KSLLQLDLSENRLSGLIPLSLSNLSS------LTVMSLFNNSLSGSIPPILGNL---KSLSTLGLHI---- 222 (918)
Q Consensus 158 ~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~------L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~---- 222 (918)
+..|..+ ++|+.|++++|.+.+..+..+..+++ |+.|++++|.+++..+..+... .+++.|.++.
T Consensus 165 ~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~ 244 (844)
T 3j0a_A 165 EHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMG 244 (844)
T ss_dssp SGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCB
T ss_pred HHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccc
Confidence 9999988 89999999999999988887777766 9999999999988777776643 5677887763
Q ss_pred -----ccccCCCCCCCcCC--CcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCC
Q 044366 223 -----NQLNGVIPPSIGNL--SSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCEN 295 (918)
Q Consensus 223 -----n~l~~~~~~~~~~l--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 295 (918)
+.+.......|.++ ++|+.|++++|.+.+..+..|..+++|+.|++++|++.+..+..|.++++|+.|++++|
T Consensus 245 ~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N 324 (844)
T 3j0a_A 245 AGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYN 324 (844)
T ss_dssp CSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESC
T ss_pred ccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCC
Confidence 33444444556554 78999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCc
Q 044366 296 HLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPP 375 (918)
Q Consensus 296 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~ 375 (918)
++.+..|..|.++++|+.|++++|.+..+++..|..+++|+.|++++|.++.+.. ++.|+.+++++|++. .+|.
T Consensus 325 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~-----~~~L~~L~l~~N~l~-~l~~ 398 (844)
T 3j0a_A 325 LLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHF-----IPSIPDIFLSGNKLV-TLPK 398 (844)
T ss_dssp CCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSS-----CCSCSEEEEESCCCC-CCCC
T ss_pred CCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccC-----CCCcchhccCCCCcc-cccc
Confidence 9999999999999999999999999999999999999999999999999985433 788999999999998 4444
Q ss_pred CcCCCCCCcEEEccCceeccccc-cchhhccccCceecccccccCCCCC-CCCCCCcccEEeccCcccc-----ccCccc
Q 044366 376 EIGDSSKLQVLDLSSNHIFGKIP-VQLVKLFSLNKLILSLNQLFGGVPL-EFGTLTELQYLDLSANKLS-----SSIPMS 448 (918)
Q Consensus 376 ~~~~~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~~~~ 448 (918)
. ..+++.|++++|++.+... ..+.++++|+.|+|++|++++..+. .+..+++|++|+|++|.++ +..+..
T Consensus 399 ~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~ 475 (844)
T 3j0a_A 399 I---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDV 475 (844)
T ss_dssp C---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSC
T ss_pred c---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhh
Confidence 3 4689999999999986533 2355889999999999999876554 4667899999999999997 345567
Q ss_pred cccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCcc
Q 044366 449 IGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLS 528 (918)
Q Consensus 449 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 528 (918)
|.++++|+.|+|++|+|++.+|..|.++++|+.|+|++|+|++..+..+. ++|+.|+|++|+|++..|..|. +|+
T Consensus 476 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~ 550 (844)
T 3j0a_A 476 FEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLS 550 (844)
T ss_dssp SSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCC
T ss_pred hcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcC
Confidence 89999999999999999999999999999999999999999987777776 8999999999999999998764 789
Q ss_pred EEEccCCcCCCCCCC
Q 044366 529 WIDISYNELQGPIPN 543 (918)
Q Consensus 529 ~l~l~~N~l~~~~p~ 543 (918)
.|++++|++.|.++.
T Consensus 551 ~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 551 VLDITHNKFICECEL 565 (844)
T ss_dssp EEEEEEECCCCSSSC
T ss_pred EEEecCCCccccccc
Confidence 999999999999875
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.6e-58 Score=548.75 Aligned_cols=528 Identities=20% Similarity=0.228 Sum_probs=469.5
Q ss_pred cccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccc
Q 044366 2 LNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNV 81 (918)
Q Consensus 2 l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~ 81 (918)
++.++++++ .+|..+. ++|++|+|++|++++..+.+|.++++|++|+|++|++++..|..|+++++|++|++++|.+
T Consensus 16 ~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l 92 (606)
T 3vq2_A 16 YQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92 (606)
T ss_dssp EECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred eEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcc
Confidence 467788888 8898765 8999999999999988888999999999999999999987788999999999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCC-cCCcCCCCCCCCceeeccccccccCCCcc
Q 044366 82 SGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNG-SIPCSLDNLSNLDTLFLYKNSLSGPIPSV 160 (918)
Q Consensus 82 ~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 160 (918)
++..|.+|+++++|++|+|++|++.+..+..++++++|++|++++|++++ .+|..++++++|++|++++|++++..+..
T Consensus 93 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~ 172 (606)
T 3vq2_A 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVND 172 (606)
T ss_dssp CCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTT
T ss_pred cccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhh
Confidence 98889999999999999999999998888899999999999999999986 46999999999999999999999998999
Q ss_pred cccccccC----eeeccccccCCcCCccCCCCCCCcEeeccCcccc-cCCCccccCCCCcceeecccccccCC------C
Q 044366 161 IGNLKSLL----QLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLS-GSIPPILGNLKSLSTLGLHINQLNGV------I 229 (918)
Q Consensus 161 ~~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~------~ 229 (918)
|+.+++|+ +|++++|.++++.+..+... +|+.|++++|.++ +..|..+.+++.|+.+++..+.+... .
T Consensus 173 ~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~ 251 (606)
T 3vq2_A 173 LQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFE 251 (606)
T ss_dssp THHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCC
T ss_pred hhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccC
Confidence 99888876 79999999998877777665 8999999999986 45677899999999999876655421 1
Q ss_pred CCCCcCCC--cCCeEEc-ccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCcccc
Q 044366 230 PPSIGNLS--SLRNLSL-FNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLR 306 (918)
Q Consensus 230 ~~~~~~l~--~L~~L~L-s~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~ 306 (918)
+..+.++. .++.+++ ..|.+.+..|. +..+++|+.|++++|.+... | .+..+++|+.|++++|.+ +.+| .+
T Consensus 252 ~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l-~-~l~~~~~L~~L~l~~n~l-~~lp-~~- 325 (606)
T 3vq2_A 252 PSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYL-E-DVPKHFKWQSLSIIRCQL-KQFP-TL- 325 (606)
T ss_dssp GGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCC-C-CCCTTCCCSEEEEESCCC-SSCC-CC-
T ss_pred hHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchhh-h-hccccccCCEEEcccccC-cccc-cC-
Confidence 12222222 4667777 77788877776 89999999999999999754 4 889999999999999999 5677 45
Q ss_pred CCCCCCeEEeecccccCccccccCCCCCccEEeCCCCcccccc--CcccccccccceeeccccccccCCCcCcCCCCCCc
Q 044366 307 NLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEI--SFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQ 384 (918)
Q Consensus 307 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~ 384 (918)
.+++|++|++++|.... ...+..+++|+.|++++|.++... ...+..++.|+.|++++|.+.+ +|..+..+++|+
T Consensus 326 ~l~~L~~L~l~~n~~~~--~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~ 402 (606)
T 3vq2_A 326 DLPFLKSLTLTMNKGSI--SFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQ 402 (606)
T ss_dssp CCSSCCEEEEESCSSCE--ECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCC
T ss_pred CCCccceeeccCCcCcc--chhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCC
Confidence 99999999999995443 336788999999999999998764 6678889999999999999985 568899999999
Q ss_pred EEEccCceeccccc-cchhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccc-cCccccccccccceecccC
Q 044366 385 VLDLSSNHIFGKIP-VQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSS-SIPMSIGNLLKLHYLNLSN 462 (918)
Q Consensus 385 ~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~ 462 (918)
.|++++|++.+..+ ..+..+++|+.|++++|++.+..|..+..+++|++|+|++|.+++ ..|..|..+++|+.|+|++
T Consensus 403 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~ 482 (606)
T 3vq2_A 403 HLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSK 482 (606)
T ss_dssp EEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred eeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCC
Confidence 99999999998887 789999999999999999999999999999999999999999997 4788999999999999999
Q ss_pred cccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCC-CccEEEccCCcCCCCC
Q 044366 463 NQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMR-SLSWIDISYNELQGPI 541 (918)
Q Consensus 463 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~l~l~~N~l~~~~ 541 (918)
|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|+|++ +|..+..++ +|+.|++++|+|+|.+
T Consensus 483 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 483 CQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred CcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCC
Confidence 99999999999999999999999999999889999999999999999999996 566688887 5999999999999988
Q ss_pred CC
Q 044366 542 PN 543 (918)
Q Consensus 542 p~ 543 (918)
+.
T Consensus 562 ~~ 563 (606)
T 3vq2_A 562 EH 563 (606)
T ss_dssp TT
T ss_pred cc
Confidence 86
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.5e-57 Score=542.14 Aligned_cols=512 Identities=20% Similarity=0.220 Sum_probs=448.2
Q ss_pred CcccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEccccc
Q 044366 1 MLNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNN 80 (918)
Q Consensus 1 ~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~ 80 (918)
.|+|++|.+++..|..|+++++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..|+.+++|++|++++|.
T Consensus 37 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 116 (606)
T 3t6q_A 37 CLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTG 116 (606)
T ss_dssp EEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSC
T ss_pred EEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccC
Confidence 48999999998888899999999999999999998899999999999999999999998889999999999999999999
Q ss_pred ccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCc--eeeccccccccCCC
Q 044366 81 VSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLD--TLFLYKNSLSGPIP 158 (918)
Q Consensus 81 ~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~--~L~L~~n~l~~~~~ 158 (918)
+++..|..+.++++|++|++++|++.+..+..+..+++|++|++++|++++..|..++.+++|+ +|++++|.+++..+
T Consensus 117 i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~ 196 (606)
T 3t6q_A 117 ISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEP 196 (606)
T ss_dssp CSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECT
T ss_pred cccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccCh
Confidence 9987788999999999999999999976555666699999999999999988888899999999 89999999998888
Q ss_pred cccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccc-----cCCCccccCCC--CcceeecccccccCCCCC
Q 044366 159 SVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLS-----GSIPPILGNLK--SLSTLGLHINQLNGVIPP 231 (918)
Q Consensus 159 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~--~L~~L~L~~n~l~~~~~~ 231 (918)
..|.. .+|+.|++++|.. .+..+..+.++....+..+.+. .+.+..|..+. +|+.|++++|.+++..+.
T Consensus 197 ~~~~~-~~L~~L~l~~~~~---~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~ 272 (606)
T 3t6q_A 197 GAFDS-AVFQSLNFGGTQN---LLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN 272 (606)
T ss_dssp TTTTT-CEEEEEECTTCSC---HHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT
T ss_pred hHhhh-ccccccccCCchh---HHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH
Confidence 87765 6899999999872 2334445554444333322221 22334454444 788999999999988888
Q ss_pred CCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCC-ccccCCCC
Q 044366 232 SIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIP-KSLRNLTS 310 (918)
Q Consensus 232 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~ 310 (918)
.|..+++|++|++++|+++ ..|..+..+++|++|++++|++.+..|..+..+++|+.|++++|.+.+.+| ..+.++++
T Consensus 273 ~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 351 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLEN 351 (606)
T ss_dssp TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTT
T ss_pred HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCc
Confidence 8999999999999999998 456678889999999999999998888889999999999999998885554 45889999
Q ss_pred CCeEEeecccccCcc--ccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcC-cCCCCCCcEEE
Q 044366 311 LERVRFNQNNLYGKV--YEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPE-IGDSSKLQVLD 387 (918)
Q Consensus 311 L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~-~~~~~~L~~L~ 387 (918)
|++|++++|.+..+. +..+..+++|++|++++|++.......+..+++|+.|++++|.+.+..+.. +..+++|++|+
T Consensus 352 L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 431 (606)
T 3t6q_A 352 LRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLN 431 (606)
T ss_dssp CCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEE
T ss_pred CCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEE
Confidence 999999999998877 677889999999999999998888888889999999999999998776654 88999999999
Q ss_pred ccCceeccccccchhhccccCceecccccccCC---CCCCCCCCCcccEEeccCccccccCccccccccccceecccCcc
Q 044366 388 LSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGG---VPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQ 464 (918)
Q Consensus 388 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 464 (918)
+++|.+.+..|..+..+++|++|++++|++++. .+..+..+++|++|+|++|.+++..|..|..+++|+.|+|++|+
T Consensus 432 l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 511 (606)
T 3t6q_A 432 LSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNR 511 (606)
T ss_dssp CTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCc
Confidence 999999998999999999999999999999762 34668899999999999999999889999999999999999999
Q ss_pred cCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCc
Q 044366 465 FSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIP 518 (918)
Q Consensus 465 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 518 (918)
+++..|..|..++.| .|+|++|++++.+|..+..+++|+.|+|++|+++...+
T Consensus 512 l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 512 LTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred cCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 999999999999999 99999999999999999999999999999999987433
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-56 Score=550.34 Aligned_cols=502 Identities=23% Similarity=0.205 Sum_probs=443.5
Q ss_pred CcccCCCCCCccCCccCCCCCCCCEEeCCCCccccc-CCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccc
Q 044366 1 MLNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGV-IPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHN 79 (918)
Q Consensus 1 ~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n 79 (918)
+|||++|.+.+..|..|.++++|++|+|++|...+. .|.+|+++++|++|+|++|++++..|..|+.+++|++|++++|
T Consensus 28 ~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n 107 (844)
T 3j0a_A 28 RLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFC 107 (844)
T ss_dssp EEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTC
T ss_pred EEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCC
Confidence 489999999988899999999999999999965444 4889999999999999999999888999999999999999999
Q ss_pred cccccCCcc--ccCCCCCCEEEccCCcccccCc-cccCCCCCCCEEECcCCcCCCcCCcCCCCC--CCCceeeccccccc
Q 044366 80 NVSGRIPSS--LGNLSNLALLYLNDNSLFGSIP-IVMGNLKSLSTLDLSQNQLNGSIPCSLDNL--SNLDTLFLYKNSLS 154 (918)
Q Consensus 80 ~~~~~~p~~--l~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l--~~L~~L~L~~n~l~ 154 (918)
.+++..|.. |.++++|++|+|++|.+.+..+ ..|+++++|++|+|++|.+++..+..+..+ ++|+.|++++|.+.
T Consensus 108 ~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~ 187 (844)
T 3j0a_A 108 GLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLY 187 (844)
T ss_dssp CCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSC
T ss_pred CCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccc
Confidence 999877765 9999999999999999987655 579999999999999999999899999888 89999999999999
Q ss_pred cCCCcccccccc------cCeeeccccccCCcCCccCCCC---CCCcEeeccC---------cccccCCCccccCC--CC
Q 044366 155 GPIPSVIGNLKS------LLQLDLSENRLSGLIPLSLSNL---SSLTVMSLFN---------NSLSGSIPPILGNL--KS 214 (918)
Q Consensus 155 ~~~~~~~~~l~~------L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~L~~---------N~l~~~~~~~~~~l--~~ 214 (918)
+..+..++.+++ |+.|++++|.+++..+..+... .+++.|.++. |.+.+..+..|.++ ++
T Consensus 188 ~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~ 267 (844)
T 3j0a_A 188 SRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSS 267 (844)
T ss_dssp CCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSC
T ss_pred cccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCC
Confidence 888887777666 9999999999988777766543 5678888773 33443444556655 78
Q ss_pred cceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccC
Q 044366 215 LSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCE 294 (918)
Q Consensus 215 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 294 (918)
|+.|++++|.+++..+..|..+++|+.|+|++|++++..+..|..+++|++|++++|.+.+..+..|..+++|+.|++++
T Consensus 268 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 347 (844)
T 3j0a_A 268 VRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQK 347 (844)
T ss_dssp CCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCS
T ss_pred ccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCC
Confidence 99999999999998899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCC
Q 044366 295 NHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIP 374 (918)
Q Consensus 295 n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~ 374 (918)
|++....+..|.++++|+.|++++|.+..+.. +++|+.|++++|+++.++.. ...++.+++++|++.+...
T Consensus 348 N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~-----~~~L~~L~l~~N~l~~l~~~----~~~l~~L~ls~N~l~~l~~ 418 (844)
T 3j0a_A 348 NHIAIIQDQTFKFLEKLQTLDLRDNALTTIHF-----IPSIPDIFLSGNKLVTLPKI----NLTANLIHLSENRLENLDI 418 (844)
T ss_dssp CCCCCCCSSCSCSCCCCCEEEEETCCSCCCSS-----CCSCSEEEEESCCCCCCCCC----CTTCCEEECCSCCCCSSTT
T ss_pred CCCCccChhhhcCCCCCCEEECCCCCCCcccC-----CCCcchhccCCCCccccccc----ccccceeecccCccccCch
Confidence 99998888999999999999999999986543 78999999999999865443 5678999999999986533
Q ss_pred c-CcCCCCCCcEEEccCceecccccc-chhhccccCceeccccccc-----CCCCCCCCCCCcccEEeccCccccccCcc
Q 044366 375 P-EIGDSSKLQVLDLSSNHIFGKIPV-QLVKLFSLNKLILSLNQLF-----GGVPLEFGTLTELQYLDLSANKLSSSIPM 447 (918)
Q Consensus 375 ~-~~~~~~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 447 (918)
. .+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.+. +..+..|..+++|++|+|++|.|++..|.
T Consensus 419 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 498 (844)
T 3j0a_A 419 LYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPG 498 (844)
T ss_dssp HHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTT
T ss_pred hhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChh
Confidence 2 356899999999999999866544 4566889999999999997 44456789999999999999999999999
Q ss_pred ccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCccccc
Q 044366 448 SIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDF 516 (918)
Q Consensus 448 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 516 (918)
.|..+++|+.|+|++|+|++..|..|. ++|+.|||++|+|++.+|..|. +|+.|++++|++...
T Consensus 499 ~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 499 VFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNKFICE 562 (844)
T ss_dssp SSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCCS
T ss_pred HccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCCcccc
Confidence 999999999999999999988888777 7999999999999998887764 799999999999764
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.4e-55 Score=525.30 Aligned_cols=507 Identities=22% Similarity=0.228 Sum_probs=450.2
Q ss_pred CcccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEccccc
Q 044366 1 MLNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNN 80 (918)
Q Consensus 1 ~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~ 80 (918)
.|+|++|.+.+..|..|+++++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..|+++++|++|++++|.
T Consensus 36 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~ 115 (606)
T 3vq2_A 36 NIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETK 115 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSC
T ss_pred EEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCc
Confidence 38999999998888899999999999999999998889999999999999999999997779999999999999999999
Q ss_pred ccccCCccccCCCCCCEEEccCCcccc-cCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCc----eeecccccccc
Q 044366 81 VSGRIPSSLGNLSNLALLYLNDNSLFG-SIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLD----TLFLYKNSLSG 155 (918)
Q Consensus 81 ~~~~~p~~l~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~----~L~L~~n~l~~ 155 (918)
+++..|..|+++++|++|++++|.+.+ ..|..|+++++|++|++++|++++..|..++.+++|+ +|++++|.+++
T Consensus 116 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~ 195 (606)
T 3vq2_A 116 LASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDF 195 (606)
T ss_dssp CCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCE
T ss_pred cccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcce
Confidence 997777899999999999999999986 5699999999999999999999988888898887766 89999999998
Q ss_pred CCCcccccccccCeeeccccccC-CcCCccCCCCCCCcEeeccCccccc------CCCccccCCC--Ccceeec-ccccc
Q 044366 156 PIPSVIGNLKSLLQLDLSENRLS-GLIPLSLSNLSSLTVMSLFNNSLSG------SIPPILGNLK--SLSTLGL-HINQL 225 (918)
Q Consensus 156 ~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~------~~~~~~~~l~--~L~~L~L-~~n~l 225 (918)
+.+..+... +|++|++++|.+. +..+..+..+++|+.+++..+.+.. ..+..+..+. +++.+++ ..|.+
T Consensus 196 ~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~ 274 (606)
T 3vq2_A 196 IQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDF 274 (606)
T ss_dssp ECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTC
T ss_pred eCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccc
Confidence 887777766 9999999999987 4567788999999999887665542 1222333333 4556666 67788
Q ss_pred cCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccc
Q 044366 226 NGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSL 305 (918)
Q Consensus 226 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 305 (918)
.+..|. +..+++|+.|++++|.+..+ | .+..+++|++|++++|.+. ..| .+ .+++|+.|++++|+..+.. .+
T Consensus 275 ~~~~~~-~~~l~~L~~L~l~~~~~~~l-~-~l~~~~~L~~L~l~~n~l~-~lp-~~-~l~~L~~L~l~~n~~~~~~--~~ 346 (606)
T 3vq2_A 275 SDDIVK-FHCLANVSAMSLAGVSIKYL-E-DVPKHFKWQSLSIIRCQLK-QFP-TL-DLPFLKSLTLTMNKGSISF--KK 346 (606)
T ss_dssp CGGGGS-CGGGTTCSEEEEESCCCCCC-C-CCCTTCCCSEEEEESCCCS-SCC-CC-CCSSCCEEEEESCSSCEEC--CC
T ss_pred cccccc-cccCCCCCEEEecCccchhh-h-hccccccCCEEEcccccCc-ccc-cC-CCCccceeeccCCcCccch--hh
Confidence 877776 89999999999999999864 4 7889999999999999994 556 45 9999999999999655433 67
Q ss_pred cCCCCCCeEEeecccccCcc--ccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCC-cCcCCCCC
Q 044366 306 RNLTSLERVRFNQNNLYGKV--YEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIP-PEIGDSSK 382 (918)
Q Consensus 306 ~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~-~~~~~~~~ 382 (918)
..+++|++|++++|.+..+. +..+..+++|++|++++|.+..++ ..+..+++|+.|++++|.+.+..+ ..+..+++
T Consensus 347 ~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 425 (606)
T 3vq2_A 347 VALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMS-ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEK 425 (606)
T ss_dssp CCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEEC-CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTT
T ss_pred ccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccch-hhccCCCCCCeeECCCCccCCccChhhhhcccc
Confidence 79999999999999998875 677889999999999999998766 778899999999999999998887 68999999
Q ss_pred CcEEEccCceeccccccchhhccccCceecccccccC-CCCCCCCCCCcccEEeccCccccccCccccccccccceeccc
Q 044366 383 LQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFG-GVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLS 461 (918)
Q Consensus 383 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 461 (918)
|++|++++|.+.+..|..+.++++|++|++++|++++ ..|..|..+++|++|+|++|.+++..|..|..+++|++|+|+
T Consensus 426 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 505 (606)
T 3vq2_A 426 LLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMS 505 (606)
T ss_dssp CCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECC
Confidence 9999999999999999999999999999999999987 478999999999999999999999999999999999999999
Q ss_pred CcccCCCCchhhccccccceEeccCCcCCCCCchhccccC-CcceEecCCCcccccCc
Q 044366 462 NNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKME-SLEKLNLSHNNLSDFIP 518 (918)
Q Consensus 462 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~ 518 (918)
+|++++..|..|..+++|++|+|++|+|+ .+|..+..++ +|+.|++++|++....+
T Consensus 506 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 506 HNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp SSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 99999999999999999999999999998 5777799887 69999999999986433
No 11
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.4e-53 Score=497.84 Aligned_cols=506 Identities=23% Similarity=0.266 Sum_probs=393.3
Q ss_pred cCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccc
Q 044366 4 LGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSG 83 (918)
Q Consensus 4 ~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 83 (918)
-++.+++ .+|..+. +++++|+|++|++++..+.+|..+++|++|+|++|++++..|..|+.+++|++|++++|.+++
T Consensus 14 c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~ 90 (570)
T 2z63_A 14 CMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 90 (570)
T ss_dssp CCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred eCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCc
Confidence 3444555 7787653 578999999999987778889999999999999999987777888999999999999999987
Q ss_pred cCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCc-CCcCCCCCCCCceeeccccccccCCCcccc
Q 044366 84 RIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGS-IPCSLDNLSNLDTLFLYKNSLSGPIPSVIG 162 (918)
Q Consensus 84 ~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~ 162 (918)
..|..|.++++|++|++++|++.+..+..++++++|++|++++|.+++. +|..++++++|++|++++|++++..+..|+
T Consensus 91 ~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 170 (570)
T 2z63_A 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 170 (570)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGH
T ss_pred cCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHcc
Confidence 7788899999999999999999877666788999999999999998863 688899999999999999999888888888
Q ss_pred ccccc----CeeeccccccCCcCCccCCCCCCCcEeeccCccccc-CCCccccCCCCcceeeccccccc------CCCCC
Q 044366 163 NLKSL----LQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSG-SIPPILGNLKSLSTLGLHINQLN------GVIPP 231 (918)
Q Consensus 163 ~l~~L----~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~------~~~~~ 231 (918)
.+++| +.|++++|.++++.+..|..+ +|+.|++++|.... ..+..+..++.++.+.+....+. .....
T Consensus 171 ~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~ 249 (570)
T 2z63_A 171 VLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKS 249 (570)
T ss_dssp HHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTT
T ss_pred chhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchh
Confidence 88888 889999999998888877766 79999998885431 23455677777777666544322 12222
Q ss_pred CCcCCC--cCCeEEcccC-cCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCC
Q 044366 232 SIGNLS--SLRNLSLFNN-RLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNL 308 (918)
Q Consensus 232 ~~~~l~--~L~~L~Ls~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l 308 (918)
.+.++. .++.++++++ .+.+..+..+..+++|+.|++++|.+.+ .|..+..+ +|+.|++++|.+. .+|. ..+
T Consensus 250 ~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l 324 (570)
T 2z63_A 250 ALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-GWQHLELVNCKFG-QFPT--LKL 324 (570)
T ss_dssp TTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-CCSEEEEESCBCS-SCCB--CBC
T ss_pred hhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC-CccEEeeccCccc-ccCc--ccc
Confidence 333333 2445555555 5555556666666666666666666663 44455555 6666666666665 2232 345
Q ss_pred CCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCC--CcCcCCCCCCcEE
Q 044366 309 TSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSI--PPEIGDSSKLQVL 386 (918)
Q Consensus 309 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~--~~~~~~~~~L~~L 386 (918)
++|+.|++++|.+....+. ..+++|+.|++++|.+ .+.. +..+..+++|++|
T Consensus 325 ~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l------------------------~~~~~~~~~~~~~~~L~~L 378 (570)
T 2z63_A 325 KSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGL------------------------SFKGCCSQSDFGTTSLKYL 378 (570)
T ss_dssp SSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCC------------------------BEEEEEEHHHHTCSCCCEE
T ss_pred cccCEEeCcCCcccccccc--ccCCCCCEEeCcCCcc------------------------CccccccccccccCccCEE
Confidence 5555666655555433222 3445555555555544 3332 4567778889999
Q ss_pred EccCceeccccccchhhccccCceecccccccCCCC-CCCCCCCcccEEeccCccccccCccccccccccceecccCccc
Q 044366 387 DLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGGVP-LEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQF 465 (918)
Q Consensus 387 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 465 (918)
++++|.+.+..+. +..+++|+.|++++|++.+..+ ..+..+++|++|++++|.+++..|..|..+++|+.|+|++|++
T Consensus 379 ~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 457 (570)
T 2z63_A 379 DLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSF 457 (570)
T ss_dssp ECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEE
T ss_pred ECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcC
Confidence 9999998865554 8889999999999999987766 5788999999999999999988999999999999999999999
Q ss_pred C-CCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCCCC
Q 044366 466 S-HKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPNS 544 (918)
Q Consensus 466 ~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~ 544 (918)
+ +.+|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..|..|..+++|+.|++++|+++|.+|..
T Consensus 458 ~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 458 QENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred ccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 7 568899999999999999999999888999999999999999999999998999999999999999999999999975
Q ss_pred c
Q 044366 545 T 545 (918)
Q Consensus 545 ~ 545 (918)
.
T Consensus 538 ~ 538 (570)
T 2z63_A 538 D 538 (570)
T ss_dssp H
T ss_pred H
Confidence 4
No 12
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-51 Score=485.80 Aligned_cols=485 Identities=23% Similarity=0.226 Sum_probs=410.0
Q ss_pred CcccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEccccc
Q 044366 1 MLNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNN 80 (918)
Q Consensus 1 ~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~ 80 (918)
.|+|++|.+.+..|.+|.++++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..|+.+++|++|++++|.
T Consensus 32 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 111 (570)
T 2z63_A 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETN 111 (570)
T ss_dssp EEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccc
Confidence 38999999998888889999999999999999998888899999999999999999997778899999999999999999
Q ss_pred ccccCCccccCCCCCCEEEccCCcccc-cCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCC----ceeecccccccc
Q 044366 81 VSGRIPSSLGNLSNLALLYLNDNSLFG-SIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNL----DTLFLYKNSLSG 155 (918)
Q Consensus 81 ~~~~~p~~l~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L----~~L~L~~n~l~~ 155 (918)
+++..+..|+++++|++|++++|.+.+ ..|..|+++++|++|++++|++++..+..++.+++| +.|++++|.+++
T Consensus 112 l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~ 191 (570)
T 2z63_A 112 LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF 191 (570)
T ss_dssp CCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCE
T ss_pred cccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCcee
Confidence 996666689999999999999999986 369999999999999999999998888889999988 899999999999
Q ss_pred CCCcccccccccCeeeccccccCC-cCCccCCCCCCCcEeeccCccc------ccCCCccccCCCC--cceeecccc-cc
Q 044366 156 PIPSVIGNLKSLLQLDLSENRLSG-LIPLSLSNLSSLTVMSLFNNSL------SGSIPPILGNLKS--LSTLGLHIN-QL 225 (918)
Q Consensus 156 ~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l------~~~~~~~~~~l~~--L~~L~L~~n-~l 225 (918)
+.+..|..+ +|++|++++|.... ..+..+..+++++.+.+..+.+ .......|..+.+ ++.++++.+ .+
T Consensus 192 ~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~ 270 (570)
T 2z63_A 192 IQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYY 270 (570)
T ss_dssp ECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEE
T ss_pred cCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhh
Confidence 988888876 89999999986542 2345667778887776654332 2233344444443 567777777 77
Q ss_pred cCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccc
Q 044366 226 NGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSL 305 (918)
Q Consensus 226 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 305 (918)
.+..+..+..+++|+.|++++|.+.+ .|..+..+ +|++|++++|.+... |. ..+++|+.|++++|.+.+..+.
T Consensus 271 ~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~L~~L~l~~n~~~~l-~~--~~l~~L~~L~l~~n~~~~~~~~-- 343 (570)
T 2z63_A 271 LDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-GWQHLELVNCKFGQF-PT--LKLKSLKRLTFTSNKGGNAFSE-- 343 (570)
T ss_dssp ESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-CCSEEEEESCBCSSC-CB--CBCSSCCEEEEESCBSCCBCCC--
T ss_pred hhhchhhhcCcCcccEEEecCccchh-hhhhhccC-CccEEeeccCccccc-Cc--ccccccCEEeCcCCcccccccc--
Confidence 77888999999999999999999984 67777788 999999999999844 33 4788999999999998876665
Q ss_pred cCCCCCCeEEeecccccCcc--ccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCC
Q 044366 306 RNLTSLERVRFNQNNLYGKV--YEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKL 383 (918)
Q Consensus 306 ~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L 383 (918)
..+++|++|++++|.+.... +..+..+++|++|++++|.+.... ..+..+++|
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~-------------------------~~~~~l~~L 398 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMS-------------------------SNFLGLEQL 398 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEE-------------------------EEEETCTTC
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccc-------------------------ccccccCCC
Confidence 78999999999999998775 567788899999999998876322 235667778
Q ss_pred cEEEccCceeccccc-cchhhccccCceecccccccCCCCCCCCCCCcccEEeccCcccc-ccCccccccccccceeccc
Q 044366 384 QVLDLSSNHIFGKIP-VQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLS-SSIPMSIGNLLKLHYLNLS 461 (918)
Q Consensus 384 ~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls 461 (918)
+.|++++|.+.+..+ ..+..+++|+.|++++|++.+..+..|..+++|++|+|++|.++ +.+|..|..+++|++|+|+
T Consensus 399 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~ 478 (570)
T 2z63_A 399 EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478 (570)
T ss_dssp CEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECT
T ss_pred CEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECC
Confidence 888888888776655 46777888888888888888888888888899999999999887 5678888889999999999
Q ss_pred CcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCc
Q 044366 462 NNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIP 518 (918)
Q Consensus 462 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 518 (918)
+|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|++++|++++..|
T Consensus 479 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 479 QCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 999988888889999999999999999988888888899999999999999987655
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.1e-51 Score=483.32 Aligned_cols=482 Identities=22% Similarity=0.224 Sum_probs=327.4
Q ss_pred EEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCc
Q 044366 25 YLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNS 104 (918)
Q Consensus 25 ~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~ 104 (918)
+.|.++++++ .+|..+. ++|++|+|++|++++..|..|..+++|++|++++|.+++..|.+|..+++|++|+|++|+
T Consensus 9 ~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 85 (549)
T 2z81_A 9 VCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNH 85 (549)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred eEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCc
Confidence 3455566665 5555443 556666666666665555566666666666666666665556666666677777777776
Q ss_pred ccccCccccCCCCCCCEEECcCCcCCCc-CCcCCCCCCCCceeeccccc-cccCCCcccccccccCeeeccccccCCcCC
Q 044366 105 LFGSIPIVMGNLKSLSTLDLSQNQLNGS-IPCSLDNLSNLDTLFLYKNS-LSGPIPSVIGNLKSLLQLDLSENRLSGLIP 182 (918)
Q Consensus 105 i~~~~~~~~~~l~~L~~L~Ls~n~i~~~-~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 182 (918)
+.+..|..|+++++|++|+|++|++++. .|..++++++|++|++++|. +..+.+..|+++++|++|++++|++++..|
T Consensus 86 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 165 (549)
T 2z81_A 86 LSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQS 165 (549)
T ss_dssp CCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred cCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccCh
Confidence 6666666666677777777777766642 35566667777777777766 444444566677777777777777776666
Q ss_pred ccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCC---CCCCcCCCcCCeEEcccCcCcCCCCc----
Q 044366 183 LSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVI---PPSIGNLSSLRNLSLFNNRLYGFVPK---- 255 (918)
Q Consensus 183 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~---~~~~~~l~~L~~L~Ls~n~l~~~~~~---- 255 (918)
..+..+++|++|++++|.+.......+..+++|++|++++|++++.. ......+++|+.|++++|.+++..+.
T Consensus 166 ~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~ 245 (549)
T 2z81_A 166 QSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLK 245 (549)
T ss_dssp TTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHG
T ss_pred hhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHH
Confidence 66777777777777777665332223345677777777777776532 12234466777777777776643332
Q ss_pred cccccCCCCeEecCCCccCCcCC------CcCCCCCCCcEEEccCCcCcCC-----CCccccCCCCCCeEEeecccccCc
Q 044366 256 EIGYLKSLSKLEFCANHLSGVIP------HSVGNLTGLVLLNMCENHLFGP-----IPKSLRNLTSLERVRFNQNNLYGK 324 (918)
Q Consensus 256 ~~~~l~~L~~L~l~~n~l~~~~~------~~~~~l~~L~~L~l~~n~l~~~-----~~~~l~~l~~L~~L~l~~n~l~~~ 324 (918)
.+..+++|+.+++++|.+.+... ..+..+.+|+.|++.++.+... .+..+....+|++|++++|.+..+
T Consensus 246 ~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~i 325 (549)
T 2z81_A 246 LLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLV 325 (549)
T ss_dssp GGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCC
T ss_pred HhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccC
Confidence 23456677777777777654321 2234455666666666554321 112223344555555555555555
Q ss_pred cccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCC---cCcCCCCCCcEEEccCceeccccc--c
Q 044366 325 VYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIP---PEIGDSSKLQVLDLSSNHIFGKIP--V 399 (918)
Q Consensus 325 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~---~~~~~~~~L~~L~L~~N~l~~~~~--~ 399 (918)
+...+..+++|++|++++|++ .+..| ..++.+++|++|+|++|+|++..+ .
T Consensus 326 p~~~~~~l~~L~~L~Ls~N~l------------------------~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 381 (549)
T 2z81_A 326 PCSFSQHLKSLEFLDLSENLM------------------------VEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGE 381 (549)
T ss_dssp CHHHHHHCTTCCEEECCSSCC------------------------CHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHH
T ss_pred CHHHHhcCccccEEEccCCcc------------------------ccccccchhhhhccccCcEEEccCCcccccccchh
Confidence 544444455555555555554 44332 236778889999999999986543 4
Q ss_pred chhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhcccccc
Q 044366 400 QLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHL 479 (918)
Q Consensus 400 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 479 (918)
.+..+++|++|++++|+++ .+|..+..+++|++|+|++|.|+. +|..+. ++|++|+|++|+|++.+ ..+++|
T Consensus 382 ~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L 453 (549)
T 2z81_A 382 ILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS----LFLPRL 453 (549)
T ss_dssp HGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC----CCCTTC
T ss_pred hhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc----ccCChh
Confidence 5888999999999999997 567788899999999999999984 444432 68999999999998653 578999
Q ss_pred ceEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCCC
Q 044366 480 SELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPN 543 (918)
Q Consensus 480 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 543 (918)
++|+|++|+|+ .+|. ...+++|+.|+|++|++++..|..|..+++|+.|++++|+|+|.+|.
T Consensus 454 ~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 454 QELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred cEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 99999999998 4565 46789999999999999999999999999999999999999999884
No 14
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3e-51 Score=436.62 Aligned_cols=255 Identities=21% Similarity=0.317 Sum_probs=207.8
Q ss_pred CCCCceeeccccceEEEEEEeC------CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCc
Q 044366 647 NFGEKYCIGKGGQRSVYKAELP------SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 647 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 720 (918)
++...+.||+|+||.||+|.+. +++.||||+++.. ......++|.+|+.++++++|||||+++|+|.+++.
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~---~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~ 103 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK---AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP 103 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC----CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcc---cChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence 4556778999999999999762 5678999999753 233446789999999999999999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC
Q 044366 721 SFIVCEYLARGSLTTILRDDAA-------------AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS 787 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 787 (918)
.++|||||++|+|.+++..... ...++|.++++|+.|||+||+|||+. +||||||||+|||+++
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYD 180 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECC
Confidence 9999999999999999965321 24589999999999999999999999 9999999999999999
Q ss_pred CCcEEEeccccccccCCCCC--CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhh
Q 044366 788 EYEAHVSDFGFAKFLEPHSS--NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISN 864 (918)
Q Consensus 788 ~~~~kl~DfG~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~ 864 (918)
++.+||+|||+|+....... ......||++|||||++.++.++.++|||||||++|||+| |+.||...... .+.
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~- 257 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVV- 257 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHH-
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHH-
Confidence 99999999999987644322 2345678999999999999999999999999999999998 89998654321 111
Q ss_pred hHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 865 MIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
..+.....++.+... +..+.+++.+||+.||++||||+||++.|+.
T Consensus 258 -----~~i~~~~~~~~p~~~---~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 258 -----EMIRNRQVLPCPDDC---PAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp -----HHHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -----HHHHcCCCCCCcccc---hHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 111122222222222 3457889999999999999999999999863
No 15
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-51 Score=437.21 Aligned_cols=254 Identities=26% Similarity=0.419 Sum_probs=207.1
Q ss_pred cCCCCceeeccccceEEEEEEeC------CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC
Q 044366 646 GNFGEKYCIGKGGQRSVYKAELP------SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ 719 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 719 (918)
++|...+.||+|+||.||+|++. +++.||||+++.. .....++|.+|++++++++|||||+++|+|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC----ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence 56778899999999999999763 4778999998653 2233578999999999999999999999999999
Q ss_pred ceEEEEEeccCCChhHHhhccc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC
Q 044366 720 HSFIVCEYLARGSLTTILRDDA----------AAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY 789 (918)
Q Consensus 720 ~~~lv~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 789 (918)
..++|||||++|+|.++++..+ ....++|.++++|+.|||+||+|||++ +||||||||+|||+++++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCC
Confidence 9999999999999999997642 235699999999999999999999999 999999999999999999
Q ss_pred cEEEeccccccccCCCCCCc--eecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhH
Q 044366 790 EAHVSDFGFAKFLEPHSSNW--TEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMI 866 (918)
Q Consensus 790 ~~kl~DfG~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~ 866 (918)
.+||+|||+|+......... ....||+.|||||++.+..++.++|||||||++|||+| |+.||...... .+ .
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~---~ 240 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EV---I 240 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HH---H
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HH---H
Confidence 99999999998765433321 23468999999999999999999999999999999999 89998754321 11 1
Q ss_pred hhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 867 IEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
..+.....+..+... +.++.+++.+||+.||++|||++||++.|+
T Consensus 241 ---~~i~~~~~~~~p~~~---~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 241 ---ECITQGRVLQRPRTC---PQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp ---HHHHHTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---HHHHcCCCCCCCccc---hHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 111122222222222 346788999999999999999999999885
No 16
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.9e-50 Score=470.90 Aligned_cols=479 Identities=20% Similarity=0.203 Sum_probs=378.4
Q ss_pred cccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccc
Q 044366 2 LNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNV 81 (918)
Q Consensus 2 l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~ 81 (918)
.+.++++++ .+|+.+. ++|++|+|++|++++..|.+|..+++|++|+|++|++++..|..|+.+++|++|++++|.+
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 366788888 8998765 8999999999999988899999999999999999999988889999999999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcccc-cCccccCCCCCCCEEECcCCc-CCCcCCcCCCCCCCCceeeccccccccCCCc
Q 044366 82 SGRIPSSLGNLSNLALLYLNDNSLFG-SIPIVMGNLKSLSTLDLSQNQ-LNGSIPCSLDNLSNLDTLFLYKNSLSGPIPS 159 (918)
Q Consensus 82 ~~~~p~~l~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~n~-i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 159 (918)
++..|..|+++++|++|++++|++++ ..|..+.++++|++|++++|+ +....+..+.++++|++|++++|++++..|.
T Consensus 87 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 87 SSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp CSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred CccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 97777789999999999999999986 356789999999999999998 4544457899999999999999999999999
Q ss_pred ccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCC---CccccCCCCcceeecccccccCCCC----CC
Q 044366 160 VIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSI---PPILGNLKSLSTLGLHINQLNGVIP----PS 232 (918)
Q Consensus 160 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~l~~L~~L~L~~n~l~~~~~----~~ 232 (918)
.++.+++|++|++++|.+..+....+..+++|++|++++|++++.. ......+++|+.|++++|.+++..+ ..
T Consensus 167 ~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~ 246 (549)
T 2z81_A 167 SLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKL 246 (549)
T ss_dssp TTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGG
T ss_pred hhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHH
Confidence 9999999999999999998665444567899999999999998642 2334568899999999999875433 33
Q ss_pred CcCCCcCCeEEcccCcCcCCC------CccccccCCCCeEecCCCccCCcC-----CCcCCCCCCCcEEEccCCcCcCCC
Q 044366 233 IGNLSSLRNLSLFNNRLYGFV------PKEIGYLKSLSKLEFCANHLSGVI-----PHSVGNLTGLVLLNMCENHLFGPI 301 (918)
Q Consensus 233 ~~~l~~L~~L~Ls~n~l~~~~------~~~~~~l~~L~~L~l~~n~l~~~~-----~~~~~~l~~L~~L~l~~n~l~~~~ 301 (918)
+..+++|+.|++++|.+.+.. ...+..+.+|+.|++.++.+.... +..+....+|+.|++++|++. .+
T Consensus 247 ~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~i 325 (549)
T 2z81_A 247 LRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LV 325 (549)
T ss_dssp GGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CC
T ss_pred hhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cC
Confidence 467789999999999887642 234567889999999999876432 111233568999999999997 45
Q ss_pred Cccc-cCCCCCCeEEeecccccCccc---cccCCCCCccEEeCCCCccccccC--cccccccccceeeccccccccCCCc
Q 044366 302 PKSL-RNLTSLERVRFNQNNLYGKVY---EAFGDHPNLTFLDLSQNNFYCEIS--FNWRNFSKLGTFNASMNNIYGSIPP 375 (918)
Q Consensus 302 ~~~l-~~l~~L~~L~l~~n~l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~~~~L~~l~l~~n~i~~~~~~ 375 (918)
|..+ .++++|++|++++|.+.+..+ ..+..+++|++|++++|+++.... ..+..+
T Consensus 326 p~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l------------------- 386 (549)
T 2z81_A 326 PCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTL------------------- 386 (549)
T ss_dssp CHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGC-------------------
T ss_pred CHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcC-------------------
Confidence 5544 689999999999999987553 347788999999999999875432 224444
Q ss_pred CcCCCCCCcEEEccCceeccccccchhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCcccccccccc
Q 044366 376 EIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKL 455 (918)
Q Consensus 376 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 455 (918)
++|++|++++|+|+ .+|..+..+++|+.|++++|++++... .+ .++|++|+|++|+|++. +..+++|
T Consensus 387 -----~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~-~~--~~~L~~L~Ls~N~l~~~----~~~l~~L 453 (549)
T 2z81_A 387 -----KNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKT-CI--PQTLEVLDVSNNNLDSF----SLFLPRL 453 (549)
T ss_dssp -----TTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCT-TS--CTTCSEEECCSSCCSCC----CCCCTTC
T ss_pred -----CCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccc-hh--cCCceEEECCCCChhhh----cccCChh
Confidence 44555555555554 344444455555555555555543222 11 24788888888888754 2467788
Q ss_pred ceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCc
Q 044366 456 HYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIP 518 (918)
Q Consensus 456 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 518 (918)
++|+|++|+|+ .+|. ...+++|++|+|++|+|++.+|..|..+++|+.|+|++|++++..|
T Consensus 454 ~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 454 QELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred cEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 88888888887 4454 4567888888888888888778888888888888888888877554
No 17
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8.9e-51 Score=430.58 Aligned_cols=257 Identities=25% Similarity=0.359 Sum_probs=200.3
Q ss_pred hcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
.+++...+.||+|+||+||+|++. ..||||+++... ......++|.+|++++++++|||||+++|++.+ +..++|
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~--~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iV 109 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEE
Confidence 356788899999999999999874 369999987532 222335789999999999999999999999865 568999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
||||++|+|.++++... .+++|.+++.|+.|||+||+|||+. +||||||||+|||+++++.+||+|||+|+....
T Consensus 110 mEy~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 110 TQWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 99999999999997642 4589999999999999999999999 999999999999999999999999999987653
Q ss_pred CC--CCceeccccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCC
Q 044366 805 HS--SNWTEFAGTVGYAAPELAYT---MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPT 879 (918)
Q Consensus 805 ~~--~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (918)
.. ......+||+.|||||++.+ ..|+.++|||||||++|||+||+.||....... .+..... .....+..+.
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~--~~~~~p~~~~ 261 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVG--RGYASPDLSK 261 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHH--TTCCCCCSTT
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHh--cCCCCCCccc
Confidence 32 22345689999999999864 358999999999999999999999987543211 1111100 1111111111
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 880 PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 880 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
. ..+....+.+++.+||+.||++||||+||++.|+
T Consensus 262 ~---~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 262 L---YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp S---CTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred c---cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 1 1223456888999999999999999999998875
No 18
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=8.9e-51 Score=437.30 Aligned_cols=254 Identities=25% Similarity=0.394 Sum_probs=201.4
Q ss_pred cCCCCceeeccccceEEEEEEeC------CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC
Q 044366 646 GNFGEKYCIGKGGQRSVYKAELP------SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ 719 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 719 (918)
.+|...+.||+|+||.||+|++. +++.||||+++.. .....++|.+|++++++++|||||+++|+|.+++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence 45677789999999999999764 4788999998652 2233578999999999999999999999999999
Q ss_pred ceEEEEEeccCCChhHHhhcccc------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC
Q 044366 720 HSFIVCEYLARGSLTTILRDDAA------------AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS 787 (918)
Q Consensus 720 ~~~lv~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 787 (918)
..++|||||++|+|.++++.... ..+++|.++++|+.|||+||+|||+. +||||||||+|||+++
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECC
Confidence 99999999999999999976432 24689999999999999999999999 9999999999999999
Q ss_pred CCcEEEeccccccccCCCCC--CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhh
Q 044366 788 EYEAHVSDFGFAKFLEPHSS--NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISN 864 (918)
Q Consensus 788 ~~~~kl~DfG~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~ 864 (918)
++.+||+|||+|+....... ......||+.|||||++.+..++.++|||||||++|||+| |+.||...... ..
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-~~--- 269 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-EA--- 269 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-HH---
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-HH---
Confidence 99999999999987654332 2234678999999999999999999999999999999999 89998754321 11
Q ss_pred hHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 865 MIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.. .+.....++.+... ..++.+++.+||+.||++||||+||++.|+
T Consensus 270 -~~---~i~~g~~~~~p~~~---~~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 270 -ID---CITQGRELERPRAC---PPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp -HH---HHHHTCCCCCCTTC---CHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred -HH---HHHcCCCCCCcccc---cHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 11 11111112222222 346788999999999999999999999885
No 19
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1e-50 Score=435.09 Aligned_cols=249 Identities=27% Similarity=0.401 Sum_probs=210.2
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
..|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++|||||++++++.+++..|+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv 149 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG----CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc----hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4688899999999999999965 579999999997542 23356789999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
||||++|+|.+++... .+++.+++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+..
T Consensus 150 mEy~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 150 MEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp ECCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 9999999999999753 489999999999999999999999 999999999999999999999999999998876
Q ss_pred CCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcch
Q 044366 805 HSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDV 884 (918)
Q Consensus 805 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 884 (918)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||...... .. .. .+... .+......
T Consensus 223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~----~~---~i~~~-~~~~~~~~ 293 (346)
T 4fih_A 223 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KA----MK---MIRDN-LPPRLKNL 293 (346)
T ss_dssp SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HH----HH---HHHHS-SCCCCSCG
T ss_pred CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HH----HH---HHHcC-CCCCCCcc
Confidence 666666789999999999999999999999999999999999999998654321 11 11 11111 11111222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 885 TDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 885 ~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.....++.+++.+||+.||++|||++|+++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 233456889999999999999999999975
No 20
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.9e-51 Score=484.48 Aligned_cols=447 Identities=18% Similarity=0.243 Sum_probs=267.4
Q ss_pred CCCEEeCCCCcccccCCccccCCCCCCEEEccccccc------c------cCCCCcCCCCCCCEEEcccccccccCCccc
Q 044366 22 KLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLH------G------TIPPVIGQLSLINELVFCHNNVSGRIPSSL 89 (918)
Q Consensus 22 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~------~------~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l 89 (918)
.++.|+|++|++.|.+|.+|+.|++|++|+|++|.+. + .+|... +..|+ +++++|.+.+.+|..+
T Consensus 82 ~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~ 158 (636)
T 4eco_A 82 RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDF 158 (636)
T ss_dssp CEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGS
T ss_pred CEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhH
Confidence 5666666666666666666666666666666666541 1 122211 22333 4444444444443333
Q ss_pred cC-------------------CCCCCEEEcc--CCcccccCccccCCCCCCCEEECcCCcCCCc----------------
Q 044366 90 GN-------------------LSNLALLYLN--DNSLFGSIPIVMGNLKSLSTLDLSQNQLNGS---------------- 132 (918)
Q Consensus 90 ~~-------------------l~~L~~L~L~--~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~---------------- 132 (918)
.. ...++.+.+. .|++++ +|..|+++++|++|+|++|++++.
T Consensus 159 ~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~ 237 (636)
T 4eco_A 159 SDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQ 237 (636)
T ss_dssp CHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHH
T ss_pred HHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcc
Confidence 21 0111222221 355555 555666666666666666666653
Q ss_pred -CCcCCC--CCCCCceeeccccccccCCCcccccccccCeeeccccc-cCC-cCCccCCCC------CCCcEeeccCccc
Q 044366 133 -IPCSLD--NLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENR-LSG-LIPLSLSNL------SSLTVMSLFNNSL 201 (918)
Q Consensus 133 -~~~~l~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~-~~~~~~~~l------~~L~~L~L~~N~l 201 (918)
+|..++ ++++|++|+|++|++.+.+|..|+++++|++|++++|+ +++ .+|..+..+ ++|++|++++|++
T Consensus 238 ~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l 317 (636)
T 4eco_A 238 YKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNL 317 (636)
T ss_dssp HTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCC
T ss_pred cCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcC
Confidence 566666 66666666666666666666666666666666666665 555 445555444 6666666666666
Q ss_pred ccCCCc--cccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCC-CCeEecCCCccCCcCC
Q 044366 202 SGSIPP--ILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKS-LSKLEFCANHLSGVIP 278 (918)
Q Consensus 202 ~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~ 278 (918)
+ .+|. .+.++++|++|++++|++++.+| .|..+++|++|++++|+++ ..|..+..+++ |++|++++|++. .+|
T Consensus 318 ~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp 393 (636)
T 4eco_A 318 K-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIP 393 (636)
T ss_dssp S-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCC
T ss_pred C-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccc
Confidence 6 4555 66666666666666666665555 6666666666666666666 44555666666 777777777666 445
Q ss_pred CcCCCCC--CCcEEEccCCcCcCCCCcccc-------CCCCCCeEEeecccccCccccccCCCCCccEEeCCCCcccccc
Q 044366 279 HSVGNLT--GLVLLNMCENHLFGPIPKSLR-------NLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEI 349 (918)
Q Consensus 279 ~~~~~l~--~L~~L~l~~n~l~~~~~~~l~-------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 349 (918)
..+..+. +|+.|++++|++.+..|..+. .+++|++|++++|.+..++...|..+++|+.|+|++|.++.++
T Consensus 394 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~ 473 (636)
T 4eco_A 394 NIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIP 473 (636)
T ss_dssp SCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCC
T ss_pred hhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcC
Confidence 5555543 677777777777777776666 6677777777777777777777777788888888888776444
Q ss_pred CcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchh--hccccCceecccccccCCCCCCCCC
Q 044366 350 SFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLV--KLFSLNKLILSLNQLFGGVPLEFGT 427 (918)
Q Consensus 350 ~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~ 427 (918)
...+.... ..+..+++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..
T Consensus 474 ~~~~~~~~-----------------~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~ 534 (636)
T 4eco_A 474 KNSLKDEN-----------------ENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLN 534 (636)
T ss_dssp SSSSEETT-----------------EECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGG
T ss_pred HHHhcccc-----------------ccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhc
Confidence 33332211 01222335666666666666 4455554 56666666666666655 5555666
Q ss_pred CCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEe
Q 044366 428 LTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLN 507 (918)
Q Consensus 428 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 507 (918)
+++|++|+|++|+ ++++|++.+.+|..|..+++|++|+|++|+|+ .+|..+. ++|+.|+
T Consensus 535 l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~ 593 (636)
T 4eco_A 535 SSTLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKIT--PNISVLD 593 (636)
T ss_dssp CSSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCCC--TTCCEEE
T ss_pred CCCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhHh--CcCCEEE
Confidence 6666666666554 45556666666666666666666666666663 4455444 5666666
Q ss_pred cCCCccccc
Q 044366 508 LSHNNLSDF 516 (918)
Q Consensus 508 L~~N~l~~~ 516 (918)
|++|++..+
T Consensus 594 Ls~N~l~~~ 602 (636)
T 4eco_A 594 IKDNPNISI 602 (636)
T ss_dssp CCSCTTCEE
T ss_pred CcCCCCccc
Confidence 666665543
No 21
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=8e-51 Score=436.71 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=204.9
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
++|+..+.||+|+||.||+|+. .+|+.||||+++..... ....+.|.+|++++++++|||||++++++.+++..|+|
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS--SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC--HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 6899999999999999999964 57999999999764322 22356899999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
|||+++|+|.+++...+ ...+++.+++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+....
T Consensus 102 mEy~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp EECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred EeCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 99999999999997643 34579999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcch
Q 044366 805 HSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDV 884 (918)
Q Consensus 805 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 884 (918)
........+||+.|||||++.+..|+.++||||+||++|||+||+.||...... . ....+.....+......
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~-------~~~~i~~~~~~~~~~~~ 249 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-N-------LVLKIISGSFPPVSLHY 249 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-H-------HHHHHHHTCCCCCCTTS
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-H-------HHHHHHcCCCCCCCccC
Confidence 333334568999999999999999999999999999999999999998754321 1 11122223333222222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 885 TDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 885 ~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..++.+++.+||+.||++|||++|+++
T Consensus 250 ---s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 250 ---SYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 346788999999999999999999975
No 22
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3e-48 Score=465.41 Aligned_cols=524 Identities=21% Similarity=0.227 Sum_probs=435.9
Q ss_pred CCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCc
Q 044366 8 LLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPS 87 (918)
Q Consensus 8 ~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~ 87 (918)
+++ .||+.+- +++++|||++|+|++..|.+|..+++|++|+|++|+|++..|..|.++++|++|+|++|++++..+.
T Consensus 42 ~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~ 118 (635)
T 4g8a_A 42 NFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALG 118 (635)
T ss_dssp CCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGG
T ss_pred CcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHH
Confidence 455 7887642 4799999999999977778999999999999999999976677899999999999999999977778
Q ss_pred cccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCc-CCcCCCCCCCCceeeccccccccCCCcccccccc
Q 044366 88 SLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGS-IPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKS 166 (918)
Q Consensus 88 ~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 166 (918)
.|.++++|++|+|++|++++..+..|+++++|++|+|++|+++.. .|..++.+++|++|++++|+++++.+..|..+.+
T Consensus 119 ~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~ 198 (635)
T 4g8a_A 119 AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQ 198 (635)
T ss_dssp GGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHT
T ss_pred HhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhh
Confidence 899999999999999999988888899999999999999999764 5778899999999999999999888888888776
Q ss_pred cC----eeeccccccCCcCCccCCCCCCCcEeeccCccccc-CCCccccCCCCcceeeccccc------ccCCCCCCCcC
Q 044366 167 LL----QLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSG-SIPPILGNLKSLSTLGLHINQ------LNGVIPPSIGN 235 (918)
Q Consensus 167 L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~n~------l~~~~~~~~~~ 235 (918)
++ .++++.|.++.+.+..+.. ..+..+++.+|.... ..+..+..+..++...+..+. +.......+..
T Consensus 199 l~~~~~~~~ls~n~l~~i~~~~~~~-~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~ 277 (635)
T 4g8a_A 199 MPLLNLSLDLSLNPMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEG 277 (635)
T ss_dssp CTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGG
T ss_pred hhhhhhhhhcccCcccccCcccccc-hhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccccccccc
Confidence 65 5788999998776655544 456788888886542 334567778888777765443 33333445566
Q ss_pred CCcCCeEEcccCcCcC---CCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCC
Q 044366 236 LSSLRNLSLFNNRLYG---FVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLE 312 (918)
Q Consensus 236 l~~L~~L~Ls~n~l~~---~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 312 (918)
+..+..+++..+.... .....+..+.+++.+.+.++.+.... .+....+++.|++.+|.+....+. .+..|+
T Consensus 278 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~ 352 (635)
T 4g8a_A 278 LCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLK 352 (635)
T ss_dssp GGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCC
T ss_pred ccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhh
Confidence 6677777766654432 23345677889999999999887554 356677899999999998766553 457788
Q ss_pred eEEeecccccCccccccCCCCCccEEeCCCCcccccc--CcccccccccceeeccccccccCCCcCcCCCCCCcEEEccC
Q 044366 313 RVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEI--SFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSS 390 (918)
Q Consensus 313 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~ 390 (918)
.+++.+|.+.... .+..+++|+.|++++|.+.... ...+.....++.++++.|.+.. .+..+..+++|+.+++++
T Consensus 353 ~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~ 429 (635)
T 4g8a_A 353 RLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQH 429 (635)
T ss_dssp EEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTT
T ss_pred hcccccccCCCCc--ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhh
Confidence 9999999876543 3456899999999999987543 3445677889999999998875 456788999999999999
Q ss_pred ceeccccc-cchhhccccCceecccccccCCCCCCCCCCCcccEEeccCccc-cccCccccccccccceecccCcccCCC
Q 044366 391 NHIFGKIP-VQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKL-SSSIPMSIGNLLKLHYLNLSNNQFSHK 468 (918)
Q Consensus 391 N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 468 (918)
|......+ ..+..+.+++.++++.|++.+..+..+..+++|+.|+|++|.+ .+..|..|..+++|++|+|++|+|+++
T Consensus 430 ~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l 509 (635)
T 4g8a_A 430 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 509 (635)
T ss_dssp SEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEE
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCc
Confidence 88875544 5678899999999999999999999999999999999999975 456788999999999999999999999
Q ss_pred CchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCC-CCccEEEccCCcCCCCCCC
Q 044366 469 IPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEM-RSLSWIDISYNELQGPIPN 543 (918)
Q Consensus 469 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~l~l~~N~l~~~~p~ 543 (918)
.|.+|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.|..|..+ ++|+.|+|++|+|+|.+..
T Consensus 510 ~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 510 SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred ChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 99999999999999999999999999999999999999999999999999999998 6899999999999998763
No 23
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.3e-50 Score=481.44 Aligned_cols=436 Identities=21% Similarity=0.288 Sum_probs=298.6
Q ss_pred cccCCCCCCccCCccCCCCCCCCEEeCCCCccc------c------cCCccccCCCCCCEEEcccccccccCCCCcCCC-
Q 044366 2 LNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLS------G------VIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQL- 68 (918)
Q Consensus 2 l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~------~------~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l- 68 (918)
|+|++|++.|.+|+++++|++|++|+|++|.+. + .+|.+. +.+|+ ++++.|.+.+.+|..+..+
T Consensus 86 L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~ 162 (636)
T 4eco_A 86 LSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLI 162 (636)
T ss_dssp EECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHH
T ss_pred EEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHH
Confidence 677777777777777777777777777777652 1 233333 45566 7777777766666555421
Q ss_pred ------------------CCCCEEEcc--cccccccCCccccCCCCCCEEEccCCccccc-----------------Ccc
Q 044366 69 ------------------SLINELVFC--HNNVSGRIPSSLGNLSNLALLYLNDNSLFGS-----------------IPI 111 (918)
Q Consensus 69 ------------------~~L~~L~l~--~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~-----------------~~~ 111 (918)
..++.+.+. .|++++ +|.+|+++++|++|+|++|++++. +|.
T Consensus 163 ~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~ 241 (636)
T 4eco_A 163 KDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTE 241 (636)
T ss_dssp HHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS
T ss_pred HHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCch
Confidence 112222222 466776 777777777777777777777764 677
Q ss_pred ccC--CCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccc-ccc-CCCcccccc------cccCeeeccccccCCcC
Q 044366 112 VMG--NLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNS-LSG-PIPSVIGNL------KSLLQLDLSENRLSGLI 181 (918)
Q Consensus 112 ~~~--~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L~Ls~N~l~~~~ 181 (918)
.++ ++++|++|+|++|++.+.+|..++++++|++|++++|+ +++ .+|..++.+ ++|++|++++|+++ .+
T Consensus 242 ~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~i 320 (636)
T 4eco_A 242 DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TF 320 (636)
T ss_dssp CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SC
T ss_pred hhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-cc
Confidence 777 77777777777777777777777777777777777777 766 566666665 77777777777777 44
Q ss_pred Cc--cCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCc-CCeEEcccCcCcCCCCcccc
Q 044366 182 PL--SLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSS-LRNLSLFNNRLYGFVPKEIG 258 (918)
Q Consensus 182 ~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~Ls~n~l~~~~~~~~~ 258 (918)
|. .+..+++|++|++++|++++.+| .|..+++|++|++++|+++ .+|..+..+++ |++|++++|+++ ..|..+.
T Consensus 321 p~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~ 397 (636)
T 4eco_A 321 PVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFD 397 (636)
T ss_dssp CCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCC
T ss_pred CchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhh
Confidence 55 67777777777777777776666 7777777777777777777 55666777777 777777777777 4455555
Q ss_pred ccC--CCCeEecCCCccCCcCCCcCC-------CCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCcccccc
Q 044366 259 YLK--SLSKLEFCANHLSGVIPHSVG-------NLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAF 329 (918)
Q Consensus 259 ~l~--~L~~L~l~~n~l~~~~~~~~~-------~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~ 329 (918)
.+. +|+.|++++|++.+..|..+. .+++|+.|++++|++....+..+..+++|++|++++|.+..++...+
T Consensus 398 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~ 477 (636)
T 4eco_A 398 AKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSL 477 (636)
T ss_dssp TTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSS
T ss_pred hcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHh
Confidence 443 777777777777777777666 66677777777777775555556667777777777777776666555
Q ss_pred CCCC-------CccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcC--CCCCCcEEEccCceeccccccc
Q 044366 330 GDHP-------NLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIG--DSSKLQVLDLSSNHIFGKIPVQ 400 (918)
Q Consensus 330 ~~l~-------~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~--~~~~L~~L~L~~N~l~~~~~~~ 400 (918)
.... +|+.|+|++|++ . .+|..+. .+++|+.|+|++|+|++ +|..
T Consensus 478 ~~~~~~~~~l~~L~~L~Ls~N~l------------------------~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~ 531 (636)
T 4eco_A 478 KDENENFKNTYLLTSIDLRFNKL------------------------T-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQ 531 (636)
T ss_dssp EETTEECTTGGGCCEEECCSSCC------------------------C-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCG
T ss_pred ccccccccccCCccEEECcCCcC------------------------C-ccChhhhhccCCCcCEEECCCCCCCC-cChh
Confidence 4332 444444444443 3 4555555 67777777777777775 6777
Q ss_pred hhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccc
Q 044366 401 LVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLS 480 (918)
Q Consensus 401 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 480 (918)
+..+++|+.|+|++|+ ++++|.+.+.+|..|..+++|+.|+|++|+|+ .+|..+. ++|+
T Consensus 532 ~~~l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~ 590 (636)
T 4eco_A 532 PLNSSTLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKIT--PNIS 590 (636)
T ss_dssp GGGCSSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCCC--TTCC
T ss_pred hhcCCCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhHh--CcCC
Confidence 7777777777777775 56677777777777777777777777777773 5555554 5777
Q ss_pred eEeccCCcCCCC
Q 044366 481 ELDLSHNILQEE 492 (918)
Q Consensus 481 ~L~Ls~N~l~~~ 492 (918)
.|||++|++...
T Consensus 591 ~L~Ls~N~l~~~ 602 (636)
T 4eco_A 591 VLDIKDNPNISI 602 (636)
T ss_dssp EEECCSCTTCEE
T ss_pred EEECcCCCCccc
Confidence 777777776543
No 24
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.2e-50 Score=466.56 Aligned_cols=458 Identities=22% Similarity=0.215 Sum_probs=297.9
Q ss_pred CEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCC
Q 044366 24 QYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDN 103 (918)
Q Consensus 24 ~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n 103 (918)
++||+++|+++ .+|..+. ++|++|+|++|++++..|..|..+++|++|++++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57889999988 6787776 88999999999888666678888888888888888888777888888888888888888
Q ss_pred cccccCccccCCCCCCCEEECcCCcCCC-cCCcCCCCCCCCceeeccccccccCCCccccccccc--Ceeecccccc--C
Q 044366 104 SLFGSIPIVMGNLKSLSTLDLSQNQLNG-SIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSL--LQLDLSENRL--S 178 (918)
Q Consensus 104 ~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~Ls~N~l--~ 178 (918)
+|+. +|.. .+++|++|+|++|++++ ..|..++++++|++|++++|++++ ..|..+++| ++|++++|.+ .
T Consensus 80 ~l~~-lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLVK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCCE-EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred ceee-cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 8874 4444 78888888888888876 357788888888888888888775 456777777 8888888888 6
Q ss_pred CcCCccCCCCC-CCcEeeccCcccccCCC-ccccCCCCcceeeccccc-------ccCCCCCCCcCCCcCCeEEcccCcC
Q 044366 179 GLIPLSLSNLS-SLTVMSLFNNSLSGSIP-PILGNLKSLSTLGLHINQ-------LNGVIPPSIGNLSSLRNLSLFNNRL 249 (918)
Q Consensus 179 ~~~~~~~~~l~-~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~-------l~~~~~~~~~~l~~L~~L~Ls~n~l 249 (918)
+..|..+..+. +...+++++|.+.+..+ ..+.++++|+.|++++|. +.+.++ .+..+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 66666666655 33456677777655433 356667777777777775 444443 566667777777777666
Q ss_pred cCCCCcccc---ccCCCCeEecCCCccCCcCCCcC-----CCCCCCcEEEccCCcCcCCCC-ccccCCCCCCeEEeeccc
Q 044366 250 YGFVPKEIG---YLKSLSKLEFCANHLSGVIPHSV-----GNLTGLVLLNMCENHLFGPIP-KSLRNLTSLERVRFNQNN 320 (918)
Q Consensus 250 ~~~~~~~~~---~l~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~l~~n~ 320 (918)
++..+..+. ..++|++|++++|++.+..|..+ ..+++|+.+++++|.+ .+| ..+..+
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~------------ 298 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEI------------ 298 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHH------------
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcc------------
Confidence 532221111 12356666666666555555544 4444455555544444 122 222222
Q ss_pred ccCccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccc
Q 044366 321 LYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQ 400 (918)
Q Consensus 321 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~ 400 (918)
| ...+|+.|++++|.+.... .+..+++|++|++++|++++..|..
T Consensus 299 --------~-~~~~L~~L~l~~n~l~~~~--------------------------~~~~l~~L~~L~Ls~n~l~~~~~~~ 343 (520)
T 2z7x_B 299 --------F-SNMNIKNFTVSGTRMVHML--------------------------CPSKISPFLHLDFSNNLLTDTVFEN 343 (520)
T ss_dssp --------H-HTCCCSEEEEESSCCCCCC--------------------------CCSSCCCCCEEECCSSCCCTTTTTT
T ss_pred --------c-ccCceeEEEcCCCcccccc--------------------------chhhCCcccEEEeECCccChhhhhh
Confidence 0 0023444444444432111 0123344444444444444444444
Q ss_pred hhhccccCceecccccccC--CCCCCCCCCCcccEEeccCccccccCcc-ccccccccceecccCcccCCCCchhhcccc
Q 044366 401 LVKLFSLNKLILSLNQLFG--GVPLEFGTLTELQYLDLSANKLSSSIPM-SIGNLLKLHYLNLSNNQFSHKIPTEFEKLI 477 (918)
Q Consensus 401 ~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 477 (918)
+..+++|++|+|++|++++ ..|..+..+++|++|+|++|.+++.+|. .+..+++|++|+|++|++++..|..+. +
T Consensus 344 ~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~ 421 (520)
T 2z7x_B 344 CGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--P 421 (520)
T ss_dssp CCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--T
T ss_pred hccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--c
Confidence 4444444444444444443 2234456666777777777777753333 466677777777777777665555554 5
Q ss_pred ccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCCC
Q 044366 478 HLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPN 543 (918)
Q Consensus 478 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 543 (918)
+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+++.+..|..+++|+.|++++|+++|.++.
T Consensus 422 ~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 422 RIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp TCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 7888888888887 5666666888888888888888865555588888888888888888887663
No 25
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.7e-49 Score=436.26 Aligned_cols=249 Identities=26% Similarity=0.395 Sum_probs=210.0
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
..|+..+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.+++.++|||||++++++.+++..|+|
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~----~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR----KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEST----TCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEecc----chhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 5699999999999999999965 57999999999753 233456789999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
||||++|+|.++++.. .+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 227 mEy~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 9999999999999753 489999999999999999999999 999999999999999999999999999998876
Q ss_pred CCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcch
Q 044366 805 HSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDV 884 (918)
Q Consensus 805 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 884 (918)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||...... .. ...+......... ..
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~----~~~i~~~~~~~~~----~~ 370 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KA----MKMIRDNLPPRLK----NL 370 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HH----HHHHHHSCCCCCS----CT
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HH----HHHHHcCCCCCCc----cc
Confidence 666666789999999999999999999999999999999999999998654321 11 1111111111111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 885 TDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 885 ~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
......+.+++.+||+.||++|||++|+++
T Consensus 371 ~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 371 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 122356788999999999999999999975
No 26
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.6e-48 Score=469.70 Aligned_cols=473 Identities=17% Similarity=0.186 Sum_probs=311.6
Q ss_pred CCCCEEeCCCCcccccCCccccCCCCCCEEEc-ccccccccCCCCcCCCC-CCCE-----EE----------cccccccc
Q 044366 21 SKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYL-DVNQLHGTIPPVIGQLS-LINE-----LV----------FCHNNVSG 83 (918)
Q Consensus 21 ~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L-~~n~l~~~~p~~~~~l~-~L~~-----L~----------l~~n~~~~ 83 (918)
..++.|+|++|++.|.+|.+|+.|++|++|+| ++|.+.|..|....... .+.. +. .....+..
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46888999999999899999999999999999 88888765443211110 0000 00 00000000
Q ss_pred -----------cCCccccCCCCCCEEEccC--CcccccCccccCCCCCCCEEECcCCcCCC-----------------cC
Q 044366 84 -----------RIPSSLGNLSNLALLYLND--NSLFGSIPIVMGNLKSLSTLDLSQNQLNG-----------------SI 133 (918)
Q Consensus 84 -----------~~p~~l~~l~~L~~L~L~~--n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-----------------~~ 133 (918)
..+........++.+.+.. |++++ +|..|++|++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 0011111122333333333 55655 56666666666666666666665 26
Q ss_pred CcCCC--CCCCCceeeccccccccCCCcccccccccCeeeccccc-cCC-cCCccCC-------CCCCCcEeeccCcccc
Q 044366 134 PCSLD--NLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENR-LSG-LIPLSLS-------NLSSLTVMSLFNNSLS 202 (918)
Q Consensus 134 ~~~l~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~-~~~~~~~-------~l~~L~~L~L~~N~l~ 202 (918)
|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..+. .+++|++|+|++|.++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 66666 77777777777777776777777777777777777776 665 4454433 3347777777777777
Q ss_pred cCCCc--cccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCC-CCeEecCCCccCCcCCC
Q 044366 203 GSIPP--ILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKS-LSKLEFCANHLSGVIPH 279 (918)
Q Consensus 203 ~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~ 279 (918)
.+|. .|.++++|+.|+|++|+++ .+| .|..+++|+.|+|++|+++ ..|..+..+++ |+.|++++|++. .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 5666 7777777777777777777 455 6777777888888888777 55666777777 888888888777 5566
Q ss_pred cCCCCCC--CcEEEccCCcCcCCCCccc---c--CCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCcc
Q 044366 280 SVGNLTG--LVLLNMCENHLFGPIPKSL---R--NLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFN 352 (918)
Q Consensus 280 ~~~~l~~--L~~L~l~~n~l~~~~~~~l---~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 352 (918)
.+..+.. |+.|++++|++.+.+|... . .+++|+.|++++|.+..++...+..+++|+.|+|++|++..++...
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~ 716 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENS 716 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTS
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHH
Confidence 6666544 8888888888876655322 2 3447888888888888888877888888999999988887444332
Q ss_pred cccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchh--hccccCceecccccccCCCCCCCCCCCc
Q 044366 353 WRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLV--KLFSLNKLILSLNQLFGGVPLEFGTLTE 430 (918)
Q Consensus 353 ~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 430 (918)
+.... ..+.++++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+++
T Consensus 717 ~~~~~-----------------~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~ 777 (876)
T 4ecn_A 717 LKPKD-----------------GNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQ 777 (876)
T ss_dssp SSCTT-----------------SCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTT
T ss_pred hcccc-----------------ccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCC
Confidence 22111 11223346777777777776 4566665 67777777777777765 4666667777
Q ss_pred ccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCC
Q 044366 431 LQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSH 510 (918)
Q Consensus 431 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 510 (918)
|+.|+|++|. ++++|++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.|+|++
T Consensus 778 L~~L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~ 836 (876)
T 4ecn_A 778 LKAFGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIAD 836 (876)
T ss_dssp CCEEECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCS
T ss_pred CCEEECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCC
Confidence 7777777765 5666777777777777777777777777777 45666554 4777777777
Q ss_pred CcccccCcccccCCCCccEEEccCCcCCC
Q 044366 511 NNLSDFIPRCFEEMRSLSWIDISYNELQG 539 (918)
Q Consensus 511 N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 539 (918)
|++..+.+..|.....+..+.|++|++++
T Consensus 837 N~l~~i~~~~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 837 NPNISIDVTSVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp CTTCEEECGGGHHHHHTTCCEEECCTTSE
T ss_pred CCCCccChHHccccccchheeecCCCccc
Confidence 77777666666666566666777776663
No 27
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.8e-49 Score=419.01 Aligned_cols=248 Identities=21% Similarity=0.331 Sum_probs=208.1
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
++|+..+.||+|+||.||+|+. .+|+.||||++....... ....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 5699999999999999999954 579999999997643322 23467899999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
|||+++|+|.+++++.+ .+++.+++.++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+.+
T Consensus 111 mEy~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999998643 499999999999999999999999 999999999999999999999999999998764
Q ss_pred CCC--CceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCc
Q 044366 805 HSS--NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSR 882 (918)
Q Consensus 805 ~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (918)
... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... . . ...+....+..+ .
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~----~---~~~i~~~~~~~p-~ 255 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG-L----I---FAKIIKLEYDFP-E 255 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-H----H---HHHHHHTCCCCC-T
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-H----H---HHHHHcCCCCCC-c
Confidence 432 345678999999999999999999999999999999999999998754321 1 1 111122222211 1
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 044366 883 DVTDKLRSIMEVAILCLVENPEARPTMKEV 912 (918)
Q Consensus 883 ~~~~~~~~l~~li~~cl~~dp~~RPt~~ev 912 (918)
.. ..++.+++.+|++.||++|||++|+
T Consensus 256 ~~---s~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 256 KF---FPKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp TC---CHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred cc---CHHHHHHHHHHccCCHhHCcChHHH
Confidence 22 2457889999999999999999986
No 28
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.7e-48 Score=453.31 Aligned_cols=453 Identities=21% Similarity=0.218 Sum_probs=363.8
Q ss_pred CcccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEccccc
Q 044366 1 MLNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNN 80 (918)
Q Consensus 1 ~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~ 80 (918)
+||+++|+++ .+|+.+. ++|++|+|++|++++..|.+|..+++|++|+|++|++++..|..|+.+++|++|++++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 4899999999 7998876 899999999999997777899999999999999999998789999999999999999999
Q ss_pred ccccCCccccCCCCCCEEEccCCcccc-cCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCC--ceeecccccc--cc
Q 044366 81 VSGRIPSSLGNLSNLALLYLNDNSLFG-SIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNL--DTLFLYKNSL--SG 155 (918)
Q Consensus 81 ~~~~~p~~l~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L--~~L~L~~n~l--~~ 155 (918)
++ .+|.. .+++|++|+|++|++++ ..|..|+++++|++|++++|++++ ..+..+++| ++|++++|.+ .+
T Consensus 81 l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~ 154 (520)
T 2z7x_B 81 LV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEK 154 (520)
T ss_dssp CC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSS
T ss_pred ee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccc
Confidence 99 57766 89999999999999987 468999999999999999999986 467778888 9999999999 77
Q ss_pred CCCccccccc-ccCeeeccccccCCcC-CccCCCCCCCcEeeccCcc-------cccCCCccccCCCCcceeeccccccc
Q 044366 156 PIPSVIGNLK-SLLQLDLSENRLSGLI-PLSLSNLSSLTVMSLFNNS-------LSGSIPPILGNLKSLSTLGLHINQLN 226 (918)
Q Consensus 156 ~~~~~~~~l~-~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~-------l~~~~~~~~~~l~~L~~L~L~~n~l~ 226 (918)
..|..|..+. +...+++++|.+.+.. +..+..+++|+.|++++|. +.+.++ .+..+++|+.|++++|.++
T Consensus 155 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~ 233 (520)
T 2z7x_B 155 EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETT 233 (520)
T ss_dssp CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEE
T ss_pred cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccC
Confidence 8888888766 4556788899887644 4578889999999999997 665555 7899999999999999887
Q ss_pred CCCCCCCc---CCCcCCeEEcccCcCcCCCCccc-----cccCCCCeEecCCCccCCcCCCcCCCC---CCCcEEEccCC
Q 044366 227 GVIPPSIG---NLSSLRNLSLFNNRLYGFVPKEI-----GYLKSLSKLEFCANHLSGVIPHSVGNL---TGLVLLNMCEN 295 (918)
Q Consensus 227 ~~~~~~~~---~l~~L~~L~Ls~n~l~~~~~~~~-----~~l~~L~~L~l~~n~l~~~~~~~~~~l---~~L~~L~l~~n 295 (918)
+..+..+. ..++|++|++++|++++..|..+ ..+++|+.+++++|.+ ......+..+ ++|+.|++++|
T Consensus 234 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n 312 (520)
T 2z7x_B 234 WNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGT 312 (520)
T ss_dssp HHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESS
T ss_pred HHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCC
Confidence 53222111 24589999999999998888887 8999999999999999 3332344333 45777777777
Q ss_pred cCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCc
Q 044366 296 HLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPP 375 (918)
Q Consensus 296 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~ 375 (918)
.+.... .+..+++|++|++++|.++ +..|.
T Consensus 313 ~l~~~~--------------------------~~~~l~~L~~L~Ls~n~l~------------------------~~~~~ 342 (520)
T 2z7x_B 313 RMVHML--------------------------CPSKISPFLHLDFSNNLLT------------------------DTVFE 342 (520)
T ss_dssp CCCCCC--------------------------CCSSCCCCCEEECCSSCCC------------------------TTTTT
T ss_pred cccccc--------------------------chhhCCcccEEEeECCccC------------------------hhhhh
Confidence 654221 1134455666666655543 34555
Q ss_pred CcCCCCCCcEEEccCceecc--ccccchhhccccCceecccccccCCCC-CCCCCCCcccEEeccCccccccCccccccc
Q 044366 376 EIGDSSKLQVLDLSSNHIFG--KIPVQLVKLFSLNKLILSLNQLFGGVP-LEFGTLTELQYLDLSANKLSSSIPMSIGNL 452 (918)
Q Consensus 376 ~~~~~~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 452 (918)
.+..+++|++|+|++|+|.+ ..|..+..+++|+.|++++|++++.+| ..+..+++|++|+|++|.+++..|..+.
T Consensus 343 ~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-- 420 (520)
T 2z7x_B 343 NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP-- 420 (520)
T ss_dssp TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--
T ss_pred hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--
Confidence 66667777777777777765 345667777888888888888877344 4578889999999999999877776664
Q ss_pred cccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccC
Q 044366 453 LKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFI 517 (918)
Q Consensus 453 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 517 (918)
++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..
T Consensus 421 ~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 421 PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccC
Confidence 78999999999998 66777779999999999999998644445889999999999999998743
No 29
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.4e-49 Score=425.11 Aligned_cols=249 Identities=23% Similarity=0.286 Sum_probs=200.2
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.+.|...++||+|+||.||+|+. .+|+.||||+++.... +.+|+.+++.++|||||++++++.+++..|+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 34677888999999999999965 5799999999875321 2479999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC-cEEEecccccccc
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY-EAHVSDFGFAKFL 802 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~DfG~~~~~ 802 (918)
||||+++|+|.++++..+ .+++.+++.|+.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+.+
T Consensus 128 vmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~ 201 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 201 (336)
T ss_dssp EECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred EEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence 999999999999998653 499999999999999999999999 999999999999999987 6999999999987
Q ss_pred CCCCCC-----ceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 803 EPHSSN-----WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 803 ~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
.+.... ....+||+.|||||++.+..|+.++||||+||++|||+||+.||...... .+.. . +.....
T Consensus 202 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~--~~~~---~---i~~~~~ 273 (336)
T 4g3f_A 202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG--PLCL---K---IASEPP 273 (336)
T ss_dssp ------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS--CCHH---H---HHHSCC
T ss_pred cCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HHHH---H---HHcCCC
Confidence 654321 12357999999999999999999999999999999999999998643221 0110 1 111111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
+ ...........+.+++.+||+.||++|||++|+++.|.
T Consensus 274 ~-~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~ 312 (336)
T 4g3f_A 274 P-IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVG 312 (336)
T ss_dssp G-GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C-chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence 0 00001122356788999999999999999999998764
No 30
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1e-48 Score=411.74 Aligned_cols=246 Identities=22% Similarity=0.329 Sum_probs=196.5
Q ss_pred CCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc----CCceEE
Q 044366 649 GEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN----AQHSFI 723 (918)
Q Consensus 649 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~l 723 (918)
...+.||+|+||.||+|.. .+++.||+|++...... ....+.|.+|++++++++|||||++++++.+ ++..++
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 5566799999999999955 57899999998754322 2235679999999999999999999999854 356899
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEcCCCCCCeeeCC-CCcEEEecccccc
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPP--IVHRDISSKNVLLDS-EYEAHVSDFGFAK 800 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~-~~~~kl~DfG~~~ 800 (918)
|||||++|+|.+++++. ..+++..++.|+.||+.||+|||++ + ||||||||+|||++. ++.+||+|||+|+
T Consensus 107 vmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 99999999999999864 3589999999999999999999998 6 999999999999985 7899999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP 880 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (918)
.... ......+||+.|||||++.+ +|+.++|||||||++|||+||+.||.......... ..+.....+..
T Consensus 181 ~~~~--~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~-------~~i~~~~~~~~ 250 (290)
T 3fpq_A 181 LKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY-------RRVTSGVKPAS 250 (290)
T ss_dssp GCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH-------HHHTTTCCCGG
T ss_pred eCCC--CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHH-------HHHHcCCCCCC
Confidence 6432 33456789999999998865 69999999999999999999999986433221111 11111111110
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
......+++.+++.+||+.||++|||++|+++
T Consensus 251 --~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 --FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 01112245788999999999999999999986
No 31
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.1e-48 Score=407.64 Aligned_cols=248 Identities=23% Similarity=0.331 Sum_probs=191.2
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
++|++.+.||+|+||.||+|.. .+|+.||||+++...... ....+.+.+|+++++.++|||||++++++.+++..|+|
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC-HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 6899999999999999999965 579999999997643332 33467899999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
|||+ +|+|.+++.+. ..+++.++..++.||+.||+|||++ +|+||||||+||++++++.+||+|||+|+...+
T Consensus 92 mEy~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred EeCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 9999 57999999764 3599999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceecccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcc
Q 044366 805 HSSNWTEFAGTVGYAAPELAYTMRA-TEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRD 883 (918)
Q Consensus 805 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (918)
.. .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||...... ... ..+....++.+ ..
T Consensus 165 ~~-~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~-----~~~---~~i~~~~~~~p-~~ 234 (275)
T 3hyh_A 165 GN-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-----VLF---KNISNGVYTLP-KF 234 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHH---HHHHHTCCCCC-TT
T ss_pred CC-ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH-----HHH---HHHHcCCCCCC-CC
Confidence 32 3345689999999999998876 57999999999999999999998754321 111 11111222211 22
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 884 VTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 884 ~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
. ..++.+++.+||+.||++|||++|+++
T Consensus 235 ~---s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 235 L---SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp S---CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred C---CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 2 245788999999999999999999986
No 32
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.9e-48 Score=467.46 Aligned_cols=444 Identities=21% Similarity=0.248 Sum_probs=350.9
Q ss_pred CCCCEEEcccccccccCCCCcCCCCCCCEEEc-ccccccccCCccccCC-CCCCEEE---------------ccCCcccc
Q 044366 45 NQLRRLYLDVNQLHGTIPPVIGQLSLINELVF-CHNNVSGRIPSSLGNL-SNLALLY---------------LNDNSLFG 107 (918)
Q Consensus 45 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l-~~n~~~~~~p~~l~~l-~~L~~L~---------------L~~n~i~~ 107 (918)
.+++.|+|++|.+.|.+|+.|+.|++|++|+| ++|.+.|..|-..... ..+.... .....+..
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57888888888888888888888888888888 7777776644221111 0000000 00000000
Q ss_pred -----------cCccccCCCCCCCEEECcC--CcCCCcCCcCCCCCCCCceeecccccccc-----------------CC
Q 044366 108 -----------SIPIVMGNLKSLSTLDLSQ--NQLNGSIPCSLDNLSNLDTLFLYKNSLSG-----------------PI 157 (918)
Q Consensus 108 -----------~~~~~~~~l~~L~~L~Ls~--n~i~~~~~~~l~~l~~L~~L~L~~n~l~~-----------------~~ 157 (918)
..+........++.+.++. |++++ +|..++++++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 0111112233455555554 88987 89999999999999999999998 27
Q ss_pred Ccccc--cccccCeeeccccccCCcCCccCCCCCCCcEeeccCcc-ccc-CCCccccCCC-------Ccceeeccccccc
Q 044366 158 PSVIG--NLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNS-LSG-SIPPILGNLK-------SLSTLGLHINQLN 226 (918)
Q Consensus 158 ~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l~-------~L~~L~L~~n~l~ 226 (918)
|..++ ++++|++|+|++|.+.+.+|..|.++++|+.|+|++|+ +++ .+|..+..++ +|+.|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 77777 99999999999999999999999999999999999998 887 6777666554 9999999999999
Q ss_pred CCCCC--CCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCC-CcEEEccCCcCcCCCCc
Q 044366 227 GVIPP--SIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTG-LVLLNMCENHLFGPIPK 303 (918)
Q Consensus 227 ~~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~ 303 (918)
.+|. .|.++++|+.|+|++|+++ ..| .+..+++|+.|++++|++. .+|..+..+++ |+.|++++|++. .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 6777 8999999999999999999 556 8999999999999999999 77888999999 999999999998 7788
Q ss_pred cccCCCC--CCeEEeecccccCccccccC-----CCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcC
Q 044366 304 SLRNLTS--LERVRFNQNNLYGKVYEAFG-----DHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPE 376 (918)
Q Consensus 304 ~l~~l~~--L~~L~l~~n~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~ 376 (918)
.+..+.. |+.|++++|.+....+.... ..++|+.|+|++|.+.. +|..
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~-------------------------lp~~ 691 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQK-------------------------FPTE 691 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCS-------------------------CCHH
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCc-------------------------cCHH
Confidence 8877765 99999999999875543321 23478888888887763 3333
Q ss_pred -cCCCCCCcEEEccCceeccccccchh-------hccccCceecccccccCCCCCCCC--CCCcccEEeccCccccccCc
Q 044366 377 -IGDSSKLQVLDLSSNHIFGKIPVQLV-------KLFSLNKLILSLNQLFGGVPLEFG--TLTELQYLDLSANKLSSSIP 446 (918)
Q Consensus 377 -~~~~~~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~ 446 (918)
+..+++|+.|+|++|+|....+..+. ++++|+.|+|++|+++ .+|..+. .+++|+.|+|++|.|++ +|
T Consensus 692 ~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp 769 (876)
T 4ecn_A 692 LFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FP 769 (876)
T ss_dssp HHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CC
T ss_pred HHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cc
Confidence 23566677777777777633333332 3459999999999998 5677776 99999999999999997 78
Q ss_pred cccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCC
Q 044366 447 MSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRS 526 (918)
Q Consensus 447 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 526 (918)
..+..+++|+.|+|++|+ ++++|++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++
T Consensus 770 ~~l~~L~~L~~L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~ 828 (876)
T 4ecn_A 770 TQPLNSSQLKAFGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQ 828 (876)
T ss_dssp CGGGGCTTCCEEECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SS
T ss_pred hhhhcCCCCCEEECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CC
Confidence 889999999999999998 7899999999999999999999999999999 55676665 69
Q ss_pred ccEEEccCCcCCCCCC
Q 044366 527 LSWIDISYNELQGPIP 542 (918)
Q Consensus 527 L~~l~l~~N~l~~~~p 542 (918)
|+.|||++|++...-+
T Consensus 829 L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 829 LYILDIADNPNISIDV 844 (876)
T ss_dssp SCEEECCSCTTCEEEC
T ss_pred CCEEECCCCCCCccCh
Confidence 9999999999985433
No 33
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.8e-49 Score=420.19 Aligned_cols=261 Identities=22% Similarity=0.346 Sum_probs=196.8
Q ss_pred cCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHH--HHHHHHhhccCCceeeEecccccCC----
Q 044366 646 GNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFL--NEVLALTEIRHRNIIKFHGFCSNAQ---- 719 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~niv~~~~~~~~~~---- 719 (918)
.+|...+.||+|+||.||+|++ +|+.||||+++... .+.+. .|+..+.+++|||||+++|+|.+++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-------~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~ 74 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-------hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCce
Confidence 3466778999999999999987 68999999986421 23334 4555567889999999999997654
Q ss_pred ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEEcCCCCCCeeeCCCCcEEEe
Q 044366 720 HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDC-----IPPIVHRDISSKNVLLDSEYEAHVS 794 (918)
Q Consensus 720 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~ 794 (918)
..++|||||++|+|.++++.. .++|+++++++.|+|+||+|||+++ .++||||||||+|||++.++.+||+
T Consensus 75 ~~~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~ 150 (303)
T 3hmm_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred EEEEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEE
Confidence 579999999999999999764 3899999999999999999999862 3589999999999999999999999
Q ss_pred ccccccccCCCCCC----ceecccccccccccccccC------CCCcccchhhHHHHHHHHHhCCCCCCcchh---hhhh
Q 044366 795 DFGFAKFLEPHSSN----WTEFAGTVGYAAPELAYTM------RATEKYDVYSFGVLALEVIKGYHPGDFVST---IFSS 861 (918)
Q Consensus 795 DfG~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~vl~el~tg~~p~~~~~~---~~~~ 861 (918)
|||+|+........ ....+||+.|||||++.+. .++.++|||||||++|||+||+.|+..... .+..
T Consensus 151 DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~ 230 (303)
T 3hmm_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTT
T ss_pred eCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchh
Confidence 99999877544322 2345799999999998754 467899999999999999999887543221 1110
Q ss_pred hh----hhHhhhhhhcccCCC-CCCc--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 862 IS----NMIIEVNQILDHRLP-TPSR--DVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 862 ~~----~~~~~~~~~~~~~~~-~~~~--~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
.. ........+...... ..+. ...+....+.+++.+||+.||++||||+||++.|++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp TSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred cccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 00 000111111222221 1111 123455678999999999999999999999999863
No 34
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=7.4e-49 Score=414.70 Aligned_cols=249 Identities=26% Similarity=0.352 Sum_probs=198.4
Q ss_pred cCCCCceeeccccceEEEEEEe----CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCce
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL----PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 721 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 721 (918)
++|++.+.||+|+||.||+|+. .+++.||||+++....... ....+.+|++++++++|||||++++++.+++..
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR--DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE--ECC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH--HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence 5699999999999999999964 2578999999976433222 234688999999999999999999999999999
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
|+||||+++|+|.+++.+.+ .+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 99999999999999998653 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 802 LEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 802 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
...........+||+.|||||++.+..|+.++||||+||++|||+||+.||...... .. ...+....++.+
T Consensus 176 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~-------~~~i~~~~~~~p- 246 (304)
T 3ubd_A 176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK-ET-------MTMILKAKLGMP- 246 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HH-------HHHHHHCCCCCC-
T ss_pred ccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH-HH-------HHHHHcCCCCCC-
Confidence 665555556678999999999999999999999999999999999999998754321 11 111122222221
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTM-----KEVCN 914 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~-----~evl~ 914 (918)
... ..++.+++.+||+.||++|||+ +|+++
T Consensus 247 ~~~---s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 247 QFL---SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp TTS---CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CcC---CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 222 2457889999999999999984 56653
No 35
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.6e-48 Score=423.07 Aligned_cols=263 Identities=22% Similarity=0.345 Sum_probs=209.7
Q ss_pred HHHHHHhcCCCCceeeccccceEEEEEEeC------CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccC-CceeeE
Q 044366 639 EEITKATGNFGEKYCIGKGGQRSVYKAELP------SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRH-RNIIKF 711 (918)
Q Consensus 639 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~ 711 (918)
++++...++|...+.||+|+||.||+|.+. .++.||||+++... .....++|.+|++++++++| ||||++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~---~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc---ChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 344455678999999999999999999653 23579999986532 22235679999999999965 899999
Q ss_pred eccccc-CCceEEEEEeccCCChhHHhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcC
Q 044366 712 HGFCSN-AQHSFIVCEYLARGSLTTILRDDAA-------------AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRD 777 (918)
Q Consensus 712 ~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 777 (918)
+|+|.+ ++..++|||||++|+|.++++.... ...++|.+++.|+.|||+||+|||++ +|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 999865 4578999999999999999976432 24589999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEeccccccccCCCCCC--ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCc
Q 044366 778 ISSKNVLLDSEYEAHVSDFGFAKFLEPHSSN--WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDF 854 (918)
Q Consensus 778 lk~~Nill~~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~ 854 (918)
|||+|||+++++.+||+|||+|+.+..+... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999977554332 234578999999999999999999999999999999998 8999865
Q ss_pred chhhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 855 VSTIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
..... .+.. .+.+ ..+++.+ ... ..++.+++.+||+.||++|||++||++.|+
T Consensus 291 ~~~~~-~~~~---~i~~--g~~~~~p-~~~---~~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 291 VKIDE-EFCR---RLKE--GTRMRAP-DYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp CCCSH-HHHH---HHHH--TCCCCCC-TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCHHH-HHHH---HHHc--CCCCCCC-ccC---CHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 43211 1111 1111 1122222 222 246788999999999999999999999875
No 36
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.5e-47 Score=407.24 Aligned_cols=250 Identities=20% Similarity=0.352 Sum_probs=192.9
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC-----
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ----- 719 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 719 (918)
++|++.+.||+|+||.||+|+. .+|+.||||+++... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence 3588999999999999999965 579999999987532 2223467999999999999999999999986543
Q ss_pred -------ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEE
Q 044366 720 -------HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAH 792 (918)
Q Consensus 720 -------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 792 (918)
..|+||||+++|+|.+++.........++..++.|+.||++||+|||++ +||||||||+|||++.++.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEE
Confidence 3689999999999999998765555567888999999999999999999 999999999999999999999
Q ss_pred EeccccccccCCCCCC------------ceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhh
Q 044366 793 VSDFGFAKFLEPHSSN------------WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFS 860 (918)
Q Consensus 793 l~DfG~~~~~~~~~~~------------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~ 860 (918)
|+|||+|+.+...... ....+||+.|||||++.+..|+.++||||+||++|||++ ||........
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~ 235 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR 235 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH
Confidence 9999999877543221 234579999999999999999999999999999999996 6653221111
Q ss_pred hhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 861 SISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..........+ .......+...+++.+||+.||++|||+.|+++
T Consensus 236 -------~~~~~~~~~~p---~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 236 -------TLTDVRNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -------HHHHHHTTCCC---HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -------HHHHHhcCCCC---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111222222 223344456778999999999999999999986
No 37
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.8e-45 Score=441.23 Aligned_cols=506 Identities=24% Similarity=0.231 Sum_probs=422.6
Q ss_pred CcccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEccccc
Q 044366 1 MLNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNN 80 (918)
Q Consensus 1 ~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~ 80 (918)
+|||++|.|++..|.+|.++++|++|||++|+|++..|.+|+++++|++|+|++|+|++..+..|.++++|++|++++|+
T Consensus 56 ~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~ 135 (635)
T 4g8a_A 56 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETN 135 (635)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSC
T ss_pred EEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCc
Confidence 48999999996666789999999999999999998888899999999999999999996666789999999999999999
Q ss_pred ccccCCccccCCCCCCEEEccCCcccc-cCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCc----eeecccccccc
Q 044366 81 VSGRIPSSLGNLSNLALLYLNDNSLFG-SIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLD----TLFLYKNSLSG 155 (918)
Q Consensus 81 ~~~~~p~~l~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~----~L~L~~n~l~~ 155 (918)
+++..+..|+++++|++|+|++|.+.. ..|..+..+++|++|+|++|+|++..+..+..+.+++ .++++.|.++.
T Consensus 136 l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~ 215 (635)
T 4g8a_A 136 LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF 215 (635)
T ss_dssp CCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCE
T ss_pred CCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccc
Confidence 997777789999999999999999975 4678899999999999999999988888887766554 68899999997
Q ss_pred CCCcccccccccCeeeccccccCC-cCCccCCCCCCCcEeeccCcc------cccCCCccccCCCCcceeecccccccC-
Q 044366 156 PIPSVIGNLKSLLQLDLSENRLSG-LIPLSLSNLSSLTVMSLFNNS------LSGSIPPILGNLKSLSTLGLHINQLNG- 227 (918)
Q Consensus 156 ~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~------l~~~~~~~~~~l~~L~~L~L~~n~l~~- 227 (918)
+.+..+.. ..++.+++++|.... ..+..+..+..++...+..+. +.......+..+..+....+..+....
T Consensus 216 i~~~~~~~-~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~ 294 (635)
T 4g8a_A 216 IQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYY 294 (635)
T ss_dssp ECTTTTTT-CEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSC
T ss_pred cCcccccc-hhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhccc
Confidence 76666654 467889998886652 334556777878777665433 233334456666677777666554432
Q ss_pred --CCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccc
Q 044366 228 --VIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSL 305 (918)
Q Consensus 228 --~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 305 (918)
.....+..+.+++.+++.++.+... ..+.....|+.|++.+|.+....+. .+..|+.+++..|.+... ...
T Consensus 295 ~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~ 367 (635)
T 4g8a_A 295 LDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--FSE 367 (635)
T ss_dssp EEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--CCC
T ss_pred ccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--ccc
Confidence 2334566778899999999988754 3456678899999999998866544 456788899999887543 345
Q ss_pred cCCCCCCeEEeecccccCcc--ccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCC-cCcCCCCC
Q 044366 306 RNLTSLERVRFNQNNLYGKV--YEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIP-PEIGDSSK 382 (918)
Q Consensus 306 ~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~-~~~~~~~~ 382 (918)
..+++|+.+++++|.+.... +..+..+.+|+.++++.|.+.... ..+..++.|+.++++.|+.....+ ..|..+.+
T Consensus 368 ~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~-~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~ 446 (635)
T 4g8a_A 368 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMS-SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN 446 (635)
T ss_dssp CBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEEC-SCCTTCTTCCEEECTTSEEESTTSSCTTTTCTT
T ss_pred ccccccccchhhccccccccccccchhhhhhhhhhhcccccccccc-ccccccccccchhhhhccccccccccccccccc
Confidence 57899999999999986543 344567789999999999886544 457788999999999988876655 46888999
Q ss_pred CcEEEccCceeccccccchhhccccCceecccccc-cCCCCCCCCCCCcccEEeccCccccccCccccccccccceeccc
Q 044366 383 LQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQL-FGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLS 461 (918)
Q Consensus 383 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 461 (918)
++.++++.|.+.+..+..+..+++|+.|+|++|++ .+..|..|..+++|++|||++|+|++..|..|.++++|++|+|+
T Consensus 447 l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls 526 (635)
T 4g8a_A 447 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS 526 (635)
T ss_dssp CCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred cccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECC
Confidence 99999999999999999999999999999999985 45678899999999999999999999999999999999999999
Q ss_pred CcccCCCCchhhccccccceEeccCCcCCCCCchhcccc-CCcceEecCCCcccc
Q 044366 462 NNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKM-ESLEKLNLSHNNLSD 515 (918)
Q Consensus 462 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~ 515 (918)
+|+|+++.|..|.++++|++|||++|+|++..|..|..+ ++|+.|+|++|+++.
T Consensus 527 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 527 HNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp TSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 999999999999999999999999999999999999988 689999999999985
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.1e-46 Score=443.11 Aligned_cols=460 Identities=21% Similarity=0.183 Sum_probs=254.7
Q ss_pred CCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccC
Q 044366 23 LQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLND 102 (918)
Q Consensus 23 L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~ 102 (918)
.+++|+++|+++ .+|..+. ++|++|+|++|++++..|..|..+++|++|++++|.+++..|+.|.++++|++|+|++
T Consensus 33 ~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 33 ESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 355666666665 3554443 5566666666665543344555555555555555555544455555555555555555
Q ss_pred CcccccCccccCCCCCCCEEECcCCcCCCc-CCcCCCCCCCCceeeccccccccCCCccccccccc--CeeeccccccCC
Q 044366 103 NSLFGSIPIVMGNLKSLSTLDLSQNQLNGS-IPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSL--LQLDLSENRLSG 179 (918)
Q Consensus 103 n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~Ls~N~l~~ 179 (918)
|+|+. +|.. .+++|++|+|++|++++. .|..|+++++|++|++++|++++. .+..+++| ++|++++|++..
T Consensus 110 N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCCE-ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCCc-cCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 55542 2322 455555555555555432 234455555555555555554431 23333333 555555554400
Q ss_pred cCCccCCCCCCCcEeeccCcccccCCCccccCCC-CcceeecccccccCCCCC-CCcCCCcCCeEEcccCcCc----CCC
Q 044366 180 LIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLK-SLSTLGLHINQLNGVIPP-SIGNLSSLRNLSLFNNRLY----GFV 253 (918)
Q Consensus 180 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~----~~~ 253 (918)
++..|..|..+. ....++++.|.+.+..+. .+..+++|+.|++++|+.. ...
T Consensus 184 ----------------------~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~ 241 (562)
T 3a79_B 184 ----------------------KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF 241 (562)
T ss_dssp ----------------------CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH
T ss_pred ----------------------cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHH
Confidence 334444444332 111234444444332221 2334455555555554310 001
Q ss_pred CccccccCCCCeEecCCCccCCcCCCc---CCCCCCCcEEEccCCcCcCCCCccc-----cCCCCCCeEEeecccccCcc
Q 044366 254 PKEIGYLKSLSKLEFCANHLSGVIPHS---VGNLTGLVLLNMCENHLFGPIPKSL-----RNLTSLERVRFNQNNLYGKV 325 (918)
Q Consensus 254 ~~~~~~l~~L~~L~l~~n~l~~~~~~~---~~~l~~L~~L~l~~n~l~~~~~~~l-----~~l~~L~~L~l~~n~l~~~~ 325 (918)
...+..+++|+.|+++++.+.+..... .....+|+.|++++|.+.+.+|..+ .+++.|+.+++..|.+ .++
T Consensus 242 ~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p 320 (562)
T 3a79_B 242 LSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFS 320 (562)
T ss_dssp HHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSC
T ss_pred HHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecC
Confidence 123344455555555544443211000 0112356666666666665555554 4444444444444444 222
Q ss_pred ccccCC---CCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchh
Q 044366 326 YEAFGD---HPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLV 402 (918)
Q Consensus 326 ~~~~~~---l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~ 402 (918)
...+.. ..+|+.|++++|.+... . ....+++|++|++++|++++..|..+.
T Consensus 321 ~~~~~~~~~~~~L~~L~l~~n~~~~~------------------------~--~~~~l~~L~~L~l~~n~l~~~~~~~~~ 374 (562)
T 3a79_B 321 KEALYSVFAEMNIKMLSISDTPFIHM------------------------V--CPPSPSSFTFLNFTQNVFTDSVFQGCS 374 (562)
T ss_dssp HHHHHHHHHTCCCSEEEEESSCCCCC------------------------C--CCSSCCCCCEEECCSSCCCTTTTTTCC
T ss_pred hhhhhhhhccCcceEEEccCCCcccc------------------------c--CccCCCCceEEECCCCccccchhhhhc
Confidence 221111 13456666666554311 0 114556666677777766666666666
Q ss_pred hccccCceecccccccCCC--CCCCCCCCcccEEeccCccccc-cCccccccccccceecccCcccCCCCchhhcccccc
Q 044366 403 KLFSLNKLILSLNQLFGGV--PLEFGTLTELQYLDLSANKLSS-SIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHL 479 (918)
Q Consensus 403 ~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 479 (918)
++++|+.|+|++|++++.. |..|..+++|++|+|++|.+++ ..+..+..+++|++|+|++|++++..|..+. ++|
T Consensus 375 ~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L 452 (562)
T 3a79_B 375 TLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKV 452 (562)
T ss_dssp SCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTC
T ss_pred ccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcC
Confidence 6677777777777766533 3557778888888888888886 3444577788888888888888765555443 588
Q ss_pred ceEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCCC
Q 044366 480 SELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPN 543 (918)
Q Consensus 480 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 543 (918)
++|+|++|+|+ .+|..+..+++|+.|+|++|+|+++.+..|..+++|+.|++++|+|+|.+|.
T Consensus 453 ~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 453 KVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp SEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 88888888887 5666666888899999999988875555588889999999999999988775
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6e-45 Score=428.48 Aligned_cols=456 Identities=21% Similarity=0.219 Sum_probs=343.7
Q ss_pred CcccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEccccc
Q 044366 1 MLNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNN 80 (918)
Q Consensus 1 ~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~ 80 (918)
++|+++|+++ .+|..+. ++|++|+|++|++++..|.+|..+++|++|+|++|++++..|..|..+++|++|++++|.
T Consensus 35 ~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 111 (562)
T 3a79_B 35 MVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNR 111 (562)
T ss_dssp EEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCc
Confidence 3789999999 5998765 899999999999997777899999999999999999998889999999999999999999
Q ss_pred ccccCCccccCCCCCCEEEccCCccccc-CccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCC--ceeecccccc--cc
Q 044366 81 VSGRIPSSLGNLSNLALLYLNDNSLFGS-IPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNL--DTLFLYKNSL--SG 155 (918)
Q Consensus 81 ~~~~~p~~l~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L--~~L~L~~n~l--~~ 155 (918)
++ .+|.. .+++|++|+|++|++.+. .|..|+++++|++|++++|+++.. .+.++++| ++|++++|++ ++
T Consensus 112 l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~ 185 (562)
T 3a79_B 112 LQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKG 185 (562)
T ss_dssp CC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCS
T ss_pred CC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccc
Confidence 99 67776 899999999999999874 468999999999999999999863 45666666 9999999999 88
Q ss_pred CCCccccccc-ccCeeeccccccCCcCC-ccCCCCCCCcEeeccCccc-----ccCCCccccCCCCcceeecccccccCC
Q 044366 156 PIPSVIGNLK-SLLQLDLSENRLSGLIP-LSLSNLSSLTVMSLFNNSL-----SGSIPPILGNLKSLSTLGLHINQLNGV 228 (918)
Q Consensus 156 ~~~~~~~~l~-~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l-----~~~~~~~~~~l~~L~~L~L~~n~l~~~ 228 (918)
..|..|..+. ..-.+++++|.+.+..+ ..+..+++|+.|++++|+. .+ ....|..+++|+.|++.++.+.+.
T Consensus 186 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~~ 264 (562)
T 3a79_B 186 GETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTWK 264 (562)
T ss_dssp SSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECHH
T ss_pred cCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcHH
Confidence 8888888765 22256788888776443 3566778888888888752 11 123455666666666665554321
Q ss_pred CCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcC-----CCCCCCcEEEccCCcCcCCCC-
Q 044366 229 IPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSV-----GNLTGLVLLNMCENHLFGPIP- 302 (918)
Q Consensus 229 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~l~~n~l~~~~~- 302 (918)
. +.+.. .. ...++|++|++++|.+.+.+|..+ ..++.|+.+++..|.+ .+|
T Consensus 265 ~-------------------~~~~~-~~-~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~ 321 (562)
T 3a79_B 265 C-------------------SVKLF-QF-FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSK 321 (562)
T ss_dssp H-------------------HHHHH-HH-HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCH
T ss_pred H-------------------HHHHH-Hh-hhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecCh
Confidence 1 10000 00 111244555555555544444443 5556666666666665 233
Q ss_pred ccccC---CCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCC
Q 044366 303 KSLRN---LTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGD 379 (918)
Q Consensus 303 ~~l~~---l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~ 379 (918)
..+.. ..+|++|++++|.+.... .+..+++|++|++++|.++ +..|..+..
T Consensus 322 ~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~------------------------~~~~~~~~~ 375 (562)
T 3a79_B 322 EALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFT------------------------DSVFQGCST 375 (562)
T ss_dssp HHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCC------------------------TTTTTTCCS
T ss_pred hhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccc------------------------cchhhhhcc
Confidence 33322 257888888888875433 1256677777777777654 456777888
Q ss_pred CCCCcEEEccCceeccc--cccchhhccccCceecccccccC-CCCCCCCCCCcccEEeccCccccccCccccccccccc
Q 044366 380 SSKLQVLDLSSNHIFGK--IPVQLVKLFSLNKLILSLNQLFG-GVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLH 456 (918)
Q Consensus 380 ~~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 456 (918)
+++|++|+|++|+|++. .|..+.++++|+.|+|++|++++ ..+..+..+++|++|+|++|.+++..|..+. ++|+
T Consensus 376 l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~ 453 (562)
T 3a79_B 376 LKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVK 453 (562)
T ss_dssp CSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCS
T ss_pred cCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCC
Confidence 88888899999888864 34668888999999999999988 4445688899999999999999877666554 7899
Q ss_pred eecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCc
Q 044366 457 YLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIP 518 (918)
Q Consensus 457 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 518 (918)
.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 454 ~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 454 VLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp EEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred EEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 9999999998 456666699999999999999995444449999999999999999987543
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.4e-44 Score=394.58 Aligned_cols=259 Identities=21% Similarity=0.316 Sum_probs=199.4
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccc------cC
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCS------NA 718 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~------~~ 718 (918)
++|++.+.||+|+||.||+|.. .+|+.||||+++... ......+.+.+|+++++.++|||||++++++. +.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~--~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF--DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc--cchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 5799999999999999999954 589999999997532 12223467889999999999999999999864 34
Q ss_pred CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccc
Q 044366 719 QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGF 798 (918)
Q Consensus 719 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 798 (918)
+..|+|||||+ |+|.+++... +.+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 67899999996 6899999764 3599999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC----CCCceecccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhh-----
Q 044366 799 AKFLEPH----SSNWTEFAGTVGYAAPELAYTM-RATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIE----- 868 (918)
Q Consensus 799 ~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~----- 868 (918)
|+.+... .......+||+.|||||++.+. .++.++||||+||++|||++|++||...... .........
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~~g~p~ 283 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMVLGTPS 283 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCC
Confidence 9876433 2233457899999999998875 4689999999999999999999998654321 111110000
Q ss_pred -----------hhhhcccCCCCCCcchH----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 869 -----------VNQILDHRLPTPSRDVT----DKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 869 -----------~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.........+....... ....++.+++.+||+.||++|||++|+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 284 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000000011111111 11356789999999999999999999875
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.5e-43 Score=386.99 Aligned_cols=203 Identities=27% Similarity=0.363 Sum_probs=173.7
Q ss_pred HHHHHHHhcCCCCceeeccccceEEEEEEe----CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEe
Q 044366 638 YEEITKATGNFGEKYCIGKGGQRSVYKAEL----PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFH 712 (918)
Q Consensus 638 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~ 712 (918)
++.+....++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+|+++++.+ +||||++++
T Consensus 13 ~~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~------~~~~~~~~E~~~l~~~~~h~nIv~l~ 86 (361)
T 4f9c_A 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT------SHPIRIAAELQCLTVAGGQDNVMGVK 86 (361)
T ss_dssp HHHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT------SCHHHHHHHHHHHHHTCSBTTBCCCS
T ss_pred HHhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc------cCHHHHHHHHHHHHHhcCCCCCceEE
Confidence 344455678899999999999999999954 25788999988542 2356789999999998 699999999
Q ss_pred cccccCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCC-CcE
Q 044366 713 GFCSNAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSE-YEA 791 (918)
Q Consensus 713 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~ 791 (918)
+++.+.++.++||||+++|+|.++++ .+++.++..++.|++.||+|||++ |||||||||+|||++.+ +.+
T Consensus 87 ~~~~~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~ 157 (361)
T 4f9c_A 87 YCFRKNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKY 157 (361)
T ss_dssp EEEEETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEE
T ss_pred EEEEECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeE
Confidence 99999999999999999999999984 289999999999999999999999 99999999999999877 799
Q ss_pred EEeccccccccCCCCC----------------------------CceecccccccccccccccC-CCCcccchhhHHHHH
Q 044366 792 HVSDFGFAKFLEPHSS----------------------------NWTEFAGTVGYAAPELAYTM-RATEKYDVYSFGVLA 842 (918)
Q Consensus 792 kl~DfG~~~~~~~~~~----------------------------~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~vl 842 (918)
||+|||+|+...+... .....+||+.|+|||++.+. .++.++||||+||++
T Consensus 158 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il 237 (361)
T 4f9c_A 158 ALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIF 237 (361)
T ss_dssp EECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred EECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHH
Confidence 9999999986543221 12335799999999999775 589999999999999
Q ss_pred HHHHhCCCCCCcc
Q 044366 843 LEVIKGYHPGDFV 855 (918)
Q Consensus 843 ~el~tg~~p~~~~ 855 (918)
|||++|+.||...
T Consensus 238 ~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 238 LSLLSGRYPFYKA 250 (361)
T ss_dssp HHHHHTCSSSSCC
T ss_pred HHHHHCCCCCCCC
Confidence 9999999998543
No 42
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=9.6e-43 Score=399.35 Aligned_cols=392 Identities=21% Similarity=0.217 Sum_probs=266.6
Q ss_pred CEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccc-cCCCcccccccccCeeeccc
Q 044366 96 ALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLS-GPIPSVIGNLKSLLQLDLSE 174 (918)
Q Consensus 96 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~ 174 (918)
+.++.+++.++ .+|. + .++|++|+|++|+|++..|..|+++++|++|++++|.+. .+.+..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 45677777776 4454 2 267888888888887777777888888888888888775 34456677777777777777
Q ss_pred cccCCcCCccCCCCCCCcEeeccCcccccCCCc--cccCCCCcceeecccccccCCCCCC-CcCCCcCCeEEcccCcCcC
Q 044366 175 NRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPP--ILGNLKSLSTLGLHINQLNGVIPPS-IGNLSSLRNLSLFNNRLYG 251 (918)
Q Consensus 175 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~Ls~n~l~~ 251 (918)
|++++..|..|.++++|++|+|++|.+++..+. .|..+++|++|+|++|.+++..|.. +.++++|++|++++|++++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 777777677777777777777777777653333 3666666666666666666655544 5666666666666666666
Q ss_pred CCCcccccc--CCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCcccccc
Q 044366 252 FVPKEIGYL--KSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAF 329 (918)
Q Consensus 252 ~~~~~~~~l--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~ 329 (918)
..+..+..+ .+|+.|++++|.+....+..+.. .....+..+++|++|++++|.+....+..+
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 232 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRF 232 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHH
T ss_pred cChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhh
Confidence 655555544 45555555555555443322110 000011223344444444444433333332
Q ss_pred CC---CCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchhhc--
Q 044366 330 GD---HPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVKL-- 404 (918)
Q Consensus 330 ~~---l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l-- 404 (918)
.. .++|+.|++++|.+.... +..+.+....+..+.++
T Consensus 233 ~~~~~~~~L~~L~l~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~ 274 (455)
T 3v47_A 233 FDAIAGTKIQSLILSNSYNMGSS--------------------------------------FGHTNFKDPDNFTFKGLEA 274 (455)
T ss_dssp HHHTTTCCEEEEECTTCTTTSCC--------------------------------------TTCCSSCCCCTTTTGGGTT
T ss_pred hccccccceeeEeeccccccccc--------------------------------------cchhhhccCcccccccccc
Confidence 22 255666666665442110 01111111222223322
Q ss_pred cccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEec
Q 044366 405 FSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDL 484 (918)
Q Consensus 405 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 484 (918)
++|+.|++++|++++..|..|..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 46777777777777777888888888999999999998888888888999999999999998888888999999999999
Q ss_pred cCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCCCCc
Q 044366 485 SHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPNST 545 (918)
Q Consensus 485 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~ 545 (918)
++|+|++..|..|..+++|+.|+|++|+|+++.+..|..+++|+.|++++|+++|.+|...
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 9999988888899999999999999999999888888999999999999999999998643
No 43
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.5e-43 Score=405.72 Aligned_cols=252 Identities=19% Similarity=0.328 Sum_probs=208.5
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+++++.++|||||++++++.+++..++
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i 231 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 231 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 36899999999999999999955 579999999986532 2235678999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCC--CcEEEeccccccc
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSE--YEAHVSDFGFAKF 801 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~DfG~~~~ 801 (918)
|||||++|+|.+++... ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 232 v~E~~~gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 232 IYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp EEECCCCCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred EEeecCCCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 99999999999999654 23589999999999999999999999 99999999999999864 8999999999998
Q ss_pred cCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 802 LEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 802 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
+.+.. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... . ....+.......+.
T Consensus 307 ~~~~~-~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-~-------~~~~i~~~~~~~~~ 377 (573)
T 3uto_A 307 LDPKQ-SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-E-------TLRNVKSCDWNMDD 377 (573)
T ss_dssp CCTTS-EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-H-------HHHHHHTTCCCCCS
T ss_pred ccCCC-ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-H-------HHHHHHhCCCCCCc
Confidence 76543 345568999999999999999999999999999999999999998754321 1 11111122222222
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.........+.+++.+||+.||.+|||++|+++
T Consensus 378 ~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 378 SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 222223456788999999999999999999986
No 44
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.6e-43 Score=403.76 Aligned_cols=252 Identities=20% Similarity=0.243 Sum_probs=200.0
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHH---HHHHhhccCCceeeEecccccCCc
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNE---VLALTEIRHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e---~~~l~~l~h~niv~~~~~~~~~~~ 720 (918)
.++|.+.++||+|+||.||+|+. .+|+.||||++.+...... .....+.+| +.+++.++|||||++++++.+++.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~-~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT-TCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchh-hhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 35799999999999999999955 5799999999976433222 223334444 566677899999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
.|+||||++||+|.+++... +.+++..++.++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+
T Consensus 267 lylVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 99999999999999999864 3499999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCC
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPT 879 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (918)
.+.... ....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||....... .... ...+.......
T Consensus 341 ~~~~~~--~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i---~~~i~~~~~~~ 413 (689)
T 3v5w_A 341 DFSKKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEI---DRMTLTMAVEL 413 (689)
T ss_dssp ECSSCC--CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHH---HHHHHHCCCCC
T ss_pred ecCCCC--CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHH---HHhhcCCCCCC
Confidence 775432 345689999999999964 579999999999999999999999986432210 0011 11111111111
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 044366 880 PSRDVTDKLRSIMEVAILCLVENPEARPT-----MKEVCN 914 (918)
Q Consensus 880 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt-----~~evl~ 914 (918)
+ ... ..++.+++.+||+.||++|++ ++||++
T Consensus 414 p-~~~---S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 414 P-DSF---SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp C-TTS---CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred C-ccC---CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1 122 245788999999999999998 677653
No 45
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=7e-42 Score=388.40 Aligned_cols=426 Identities=28% Similarity=0.300 Sum_probs=194.0
Q ss_pred CCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEE
Q 044366 19 NLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALL 98 (918)
Q Consensus 19 ~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L 98 (918)
..+.|++|++++|++ +.+|.+|+++++|++|++++|++++.+|..++.+.+|+.+++.+|.. .++++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 468899999999999 58899999999999999999999888999999888775555444432 345555
Q ss_pred EccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccC
Q 044366 99 YLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLS 178 (918)
Q Consensus 99 ~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 178 (918)
++++|++++ .|.. .++|++|++++|++++ +|.. +++|++|++++|+++++.. . .++|++|++++|+++
T Consensus 77 ~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~-~---~~~L~~L~L~~n~l~ 144 (454)
T 1jl5_A 77 ELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSD-L---PPLLEYLGVSNNQLE 144 (454)
T ss_dssp ECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCS-C---CTTCCEEECCSSCCS
T ss_pred EecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccC-C---CCCCCEEECcCCCCC
Confidence 555555543 2221 2455555555555554 3322 2455555555555553211 1 145555666655555
Q ss_pred CcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCcccc
Q 044366 179 GLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIG 258 (918)
Q Consensus 179 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 258 (918)
++ | .|..+++|++|++++|++++ +|..+ .+|++|++++|++++. | .+.++++|++|++++|+++++ |..
T Consensus 145 ~l-p-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~-~~~~l~~L~~L~l~~N~l~~l-~~~-- 213 (454)
T 1jl5_A 145 KL-P-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-P-ELQNLPFLTAIYADNNSLKKL-PDL-- 213 (454)
T ss_dssp SC-C-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSSC-CCC--
T ss_pred CC-c-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcC-c-cccCCCCCCEEECCCCcCCcC-CCC--
Confidence 42 3 35555556666666655553 23222 3555666666655542 2 355556666666666655542 211
Q ss_pred ccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEE
Q 044366 259 YLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFL 338 (918)
Q Consensus 259 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 338 (918)
.++|++|++++|.+.. .| .+..+++|+.|++++|++.+ +|.. +++|+.|++++|.+.+++.. .++|+.|
T Consensus 214 -~~~L~~L~l~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l~~~----~~~L~~L 282 (454)
T 1jl5_A 214 -PLSLESIVAGNNILEE-LP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDLPEL----PQSLTFL 282 (454)
T ss_dssp -CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCCCCC----CTTCCEE
T ss_pred -cCcccEEECcCCcCCc-cc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccccCcc----cCcCCEE
Confidence 1355666666665552 33 25555666666666665553 2221 24566666666665554321 2556666
Q ss_pred eCCCCccccccCcccccccccceeeccccccccCCCcCcCCC-CCCcEEEccCceeccccccchhhccccCceecccccc
Q 044366 339 DLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDS-SKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQL 417 (918)
Q Consensus 339 ~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 417 (918)
++++|.++.++.. .+.|+.|++++|.+.+. ..+ ++|++|++++|++++ +|.. +++|+.|++++|++
T Consensus 283 ~ls~N~l~~l~~~----~~~L~~L~l~~N~l~~i-----~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l 349 (454)
T 1jl5_A 283 DVSENIFSGLSEL----PPNLYYLNASSNEIRSL-----CDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHL 349 (454)
T ss_dssp ECCSSCCSEESCC----CTTCCEEECCSSCCSEE-----CCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC
T ss_pred ECcCCccCcccCc----CCcCCEEECcCCcCCcc-----cCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcc
Confidence 6666666543211 13555555555555431 122 367777777777765 3333 36677777777777
Q ss_pred cCCCCCCCCCCCcccEEeccCccccc--cCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCC--CC
Q 044366 418 FGGVPLEFGTLTELQYLDLSANKLSS--SIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQE--EI 493 (918)
Q Consensus 418 ~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~ 493 (918)
++. |. .+++|++|+|++|.+++ .+|..+.. |+.|.+.+.+|.. +++|+.||+++|++++ .+
T Consensus 350 ~~l-p~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~i 414 (454)
T 1jl5_A 350 AEV-PE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDI 414 (454)
T ss_dssp SCC-CC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-------------------------------
T ss_pred ccc-cc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccc
Confidence 643 33 35677777777777776 44544432 2345555555543 4789999999999986 44
Q ss_pred chhccccCCcceEecCCCcccccCcccccCC
Q 044366 494 PPQICKMESLEKLNLSHNNLSDFIPRCFEEM 524 (918)
Q Consensus 494 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 524 (918)
| ++|+.|.+.+|.+.+..+.+....
T Consensus 415 P------~sl~~L~~~~~~~~~~~~~~~~~~ 439 (454)
T 1jl5_A 415 P------ESVEDLRMNSERVVDPYEFAHETT 439 (454)
T ss_dssp -------------------------------
T ss_pred h------hhHhheeCcCcccCCccccCHHHh
Confidence 4 357778899999888766555443
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.1e-41 Score=390.54 Aligned_cols=386 Identities=22% Similarity=0.238 Sum_probs=302.7
Q ss_pred CEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCc-CCcCCCCCCCCceeeccc
Q 044366 72 NELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGS-IPCSLDNLSNLDTLFLYK 150 (918)
Q Consensus 72 ~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~-~~~~l~~l~~L~~L~L~~ 150 (918)
+.++.+++.++ .+|. +. ++|++|+|++|.+++..|..|.++++|++|+|++|.+.+. .+..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 46788888887 6776 43 8999999999999988899999999999999999999744 467899999999999999
Q ss_pred cccccCCCcccccccccCeeeccccccCCcCCc--cCCCCCCCcEeeccCcccccCCCcc-ccCCCCcceeecccccccC
Q 044366 151 NSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPL--SLSNLSSLTVMSLFNNSLSGSIPPI-LGNLKSLSTLGLHINQLNG 227 (918)
Q Consensus 151 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~n~l~~ 227 (918)
|++++..|..|+++++|++|+|++|++++..+. .|..+++|++|+|++|.+++..|.. |.++++|++|++++|++++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 999999899999999999999999999985443 4999999999999999999887776 8999999999999999999
Q ss_pred CCCCCCcCC--CcCCeEEcccCcCcCCCCcccc--------ccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcC
Q 044366 228 VIPPSIGNL--SSLRNLSLFNNRLYGFVPKEIG--------YLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHL 297 (918)
Q Consensus 228 ~~~~~~~~l--~~L~~L~Ls~n~l~~~~~~~~~--------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 297 (918)
..+..+..+ .+|+.|++++|.+.+..+..+. .+++|++|++++|++.+..|..+...
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~------------- 235 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDA------------- 235 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHH-------------
T ss_pred cChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhcc-------------
Confidence 988888876 7899999999999876654432 33445555555555544444333222
Q ss_pred cCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCc
Q 044366 298 FGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEI 377 (918)
Q Consensus 298 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~ 377 (918)
...++|+.|++++|.+.... +..+.+.......+.+
T Consensus 236 --------~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~---------------------- 271 (455)
T 3v47_A 236 --------IAGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKG---------------------- 271 (455)
T ss_dssp --------TTTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGG----------------------
T ss_pred --------ccccceeeEeeccccccccc--------------cchhhhccCccccccc----------------------
Confidence 01144555555555432211 1112221111111110
Q ss_pred CCCCCCcEEEccCceeccccccchhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccce
Q 044366 378 GDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHY 457 (918)
Q Consensus 378 ~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 457 (918)
...++|+.|++++|++.+..|..+..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|..+++|++
T Consensus 272 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 351 (455)
T 3v47_A 272 LEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEV 351 (455)
T ss_dssp GTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCE
T ss_pred ccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCE
Confidence 01246777777777777777777778888888888888888778888888899999999999998888888889999999
Q ss_pred ecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCc
Q 044366 458 LNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIP 518 (918)
Q Consensus 458 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 518 (918)
|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++++..|
T Consensus 352 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 352 LDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 9999999988888899999999999999999988777778889999999999999988665
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.9e-42 Score=388.97 Aligned_cols=426 Identities=25% Similarity=0.262 Sum_probs=269.8
Q ss_pred CccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCC
Q 044366 38 PPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLK 117 (918)
Q Consensus 38 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~ 117 (918)
|+.+ +.++|++|++++|.+ +.+|..|+++++|++|++++|.+.+.+|.+++.+++|+.+++.+|.. .
T Consensus 5 p~~~-~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~ 71 (454)
T 1jl5_A 5 PRNV-SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------R 71 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------H
T ss_pred cccc-ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------c
Confidence 4444 468999999999999 59999999999999999999999999999999999999888888753 4
Q ss_pred CCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeecc
Q 044366 118 SLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLF 197 (918)
Q Consensus 118 ~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 197 (918)
+|++|++++|.+++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|+++++.. . .++|++|+++
T Consensus 72 ~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~-~---~~~L~~L~L~ 139 (454)
T 1jl5_A 72 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSD-L---PPLLEYLGVS 139 (454)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCS-C---CTTCCEEECC
T ss_pred CCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccC-C---CCCCCEEECc
Confidence 78999999999995 4442 3789999999999997 4543 4889999999999997532 1 2689999999
Q ss_pred CcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcC
Q 044366 198 NNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVI 277 (918)
Q Consensus 198 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 277 (918)
+|++++ +| .|.++++|++|++++|++++ +|..+ .+|++|++++|+++++ | .+..+++|+.|++++|++.++
T Consensus 140 ~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~-~~~~l~~L~~L~l~~N~l~~l- 210 (454)
T 1jl5_A 140 NNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-P-ELQNLPFLTAIYADNNSLKKL- 210 (454)
T ss_dssp SSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSSC-
T ss_pred CCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcC-c-cccCCCCCCEEECCCCcCCcC-
Confidence 999996 56 59999999999999999986 44433 5899999999999974 4 589999999999999999864
Q ss_pred CCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCccccccc
Q 044366 278 PHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFS 357 (918)
Q Consensus 278 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 357 (918)
|.. .++|+.|++++|++. .+| .+.++++|++|++++|.+..++. ..++|+.|++++|.++.++. ..+
T Consensus 211 ~~~---~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~N~l~~l~~----~~~ 277 (454)
T 1jl5_A 211 PDL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPD----LPPSLEALNVRDNYLTDLPE----LPQ 277 (454)
T ss_dssp CCC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCS----CCTTCCEEECCSSCCSCCCC----CCT
T ss_pred CCC---cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcccc----cccccCEEECCCCcccccCc----ccC
Confidence 332 258999999999998 556 48899999999999999987653 24789999999998876443 236
Q ss_pred ccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchhhc-cccCceecccccccCCCCCCCCCCCcccEEec
Q 044366 358 KLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVKL-FSLNKLILSLNQLFGGVPLEFGTLTELQYLDL 436 (918)
Q Consensus 358 ~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 436 (918)
.|+.|++++|++.+. |.. .++|+.|++++|++++. + .+ .+|+.|++++|++++ +|.. +++|++|++
T Consensus 278 ~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L 344 (454)
T 1jl5_A 278 SLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIA 344 (454)
T ss_dssp TCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred cCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEEC
Confidence 788888888887752 111 15778888888877642 1 22 477778888887775 3332 467778888
Q ss_pred cCccccccCccccccccccceecccCcccCC--CCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCccc
Q 044366 437 SANKLSSSIPMSIGNLLKLHYLNLSNNQFSH--KIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLS 514 (918)
Q Consensus 437 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 514 (918)
++|.+++ +|. .+++|++|+|++|++++ .+|..+..+ +.|.+.+.+|.. +++|+.|++++|+++
T Consensus 345 ~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~---~~~L~~L~ls~N~l~ 409 (454)
T 1jl5_A 345 SFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPEL---PQNLKQLHVETNPLR 409 (454)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC--------------------------
T ss_pred CCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccccccccc---cCcCCEEECCCCcCC
Confidence 8887774 444 35777888888888776 455555432 345555555553 478999999999999
Q ss_pred c--cCcccccCCCCccEEEccCCcCCCCCCCC
Q 044366 515 D--FIPRCFEEMRSLSWIDISYNELQGPIPNS 544 (918)
Q Consensus 515 ~--~~~~~~~~l~~L~~l~l~~N~l~~~~p~~ 544 (918)
+ .+|. +++.|.+.+|.+.+++|..
T Consensus 410 ~~~~iP~------sl~~L~~~~~~~~~~~~~~ 435 (454)
T 1jl5_A 410 EFPDIPE------SVEDLRMNSERVVDPYEFA 435 (454)
T ss_dssp --------------------------------
T ss_pred ccccchh------hHhheeCcCcccCCccccC
Confidence 7 4553 4667788999999887754
No 48
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.3e-42 Score=374.58 Aligned_cols=280 Identities=33% Similarity=0.603 Sum_probs=227.3
Q ss_pred CccCHHHHHHHhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEec
Q 044366 634 GKVLYEEITKATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHG 713 (918)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~ 713 (918)
..+++.++..+.++|...+.||+|+||.||+|+..+|+.||||++...... .....+.+|+++++.++||||+++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ---GGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc---hHHHHHHHHHHHHHhccCCCccceEE
Confidence 456788999999999999999999999999998888999999998764322 22347999999999999999999999
Q ss_pred ccccCCceEEEEEeccCCChhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEE
Q 044366 714 FCSNAQHSFIVCEYLARGSLTTILRDDA-AAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAH 792 (918)
Q Consensus 714 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 792 (918)
++.+++..++||||+++|+|.++++... ....+++..++.++.|++.||+|||+.+.++|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 9999999999999999999999998754 234589999999999999999999998777999999999999999999999
Q ss_pred EeccccccccCCCCCC-ceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhh---
Q 044366 793 VSDFGFAKFLEPHSSN-WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIE--- 868 (918)
Q Consensus 793 l~DfG~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~--- 868 (918)
|+|||++......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||+...............
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 9999999877544332 334568999999999998889999999999999999999999986332111100000011
Q ss_pred ------hhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 869 ------VNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 869 ------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
.....+.... .....+....+.+++.+||+.||++|||++||++.|++
T Consensus 255 ~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQ--GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTSSCCSTTSSCTTCT--TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HhhchhhhhhcChhhc--cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 1111111111 22345667889999999999999999999999999863
No 49
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.7e-41 Score=364.52 Aligned_cols=250 Identities=26% Similarity=0.395 Sum_probs=209.4
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 94 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ----QQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGG----GCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecc----cccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEE
Confidence 46899999999999999999964 67999999998653 23346789999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.+++... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 95 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp EEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999999999754 389999999999999999999999 99999999999999999999999999998877
Q ss_pred CCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcc
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRD 883 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (918)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||.......... ............
T Consensus 168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-----~~~~~~~~~~~~---- 238 (297)
T 3fxz_A 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-----LIATNGTPELQN---- 238 (297)
T ss_dssp STTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHHCSCCCSC----
T ss_pred CcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----HHHhCCCCCCCC----
Confidence 66555566789999999999999999999999999999999999999986543321110 011111111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 884 VTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 884 ~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.......+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 239 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1122356788999999999999999999975
No 50
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=8.7e-42 Score=368.70 Aligned_cols=263 Identities=30% Similarity=0.461 Sum_probs=203.0
Q ss_pred HHHHHHhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccC
Q 044366 639 EEITKATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNA 718 (918)
Q Consensus 639 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 718 (918)
.++....++|.+.+.||+|+||.||+|+. +|+.||||++..... .....+.|.+|++++++++||||+++++++.+.
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 106 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 34444567899999999999999999976 688999999865321 122246789999999999999999999999999
Q ss_pred CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEcCCCCCCeeeCCCCcEEEecc
Q 044366 719 QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPP--IVHRDISSKNVLLDSEYEAHVSDF 796 (918)
Q Consensus 719 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Df 796 (918)
+..++||||+++|+|.+++........+++.+++.++.|++.||+|||+. + |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCC
Confidence 99999999999999999998765445589999999999999999999999 8 999999999999999999999999
Q ss_pred ccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 797 GFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 797 G~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
|+++.............||+.|+|||++.+..++.++||||||+++|||++|+.||....... ..... ......
T Consensus 184 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~-----~~~~~-~~~~~~ 257 (309)
T 3p86_A 184 GLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ-----VVAAV-GFKCKR 257 (309)
T ss_dssp C-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH-----HHHHH-HHSCCC
T ss_pred CCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHH-HhcCCC
Confidence 999876554444455679999999999999999999999999999999999999987543211 00010 001111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.. .... ....+.+++.+||+.||++|||++|+++.|+
T Consensus 258 ~~-~~~~---~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 258 LE-IPRN---LNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp CC-CCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC-CCcc---CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11 1111 2245788999999999999999999999885
No 51
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=6.4e-41 Score=364.23 Aligned_cols=261 Identities=25% Similarity=0.369 Sum_probs=214.8
Q ss_pred CccCHHHHHHHhcC----------CCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhh
Q 044366 634 GKVLYEEITKATGN----------FGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTE 702 (918)
Q Consensus 634 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~ 702 (918)
+.++++++..+++. |...+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|+.+++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~----~~~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLR----KQQRRELLFNEVVIMRD 98 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT----TCCSHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEecc----chhHHHHHHHHHHHHHh
Confidence 45778888887764 666779999999999999765 7999999998653 23446789999999999
Q ss_pred ccCCceeeEecccccCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCC
Q 044366 703 IRHRNIIKFHGFCSNAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKN 782 (918)
Q Consensus 703 l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 782 (918)
++||||+++++++..++..++||||+++|+|.+++... .+++.+++.++.|++.||+|||+. +|+||||||+|
T Consensus 99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N 171 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDS 171 (321)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence 99999999999999999999999999999999998753 489999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhh
Q 044366 783 VLLDSEYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSI 862 (918)
Q Consensus 783 ill~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~ 862 (918)
|+++.++.+||+|||++..............||+.|+|||++.+..++.++||||||+++|||++|+.||....... .
T Consensus 172 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~-~- 249 (321)
T 2c30_A 172 ILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ-A- 249 (321)
T ss_dssp EEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-H-
T ss_pred EEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-H-
Confidence 99999999999999999887655444556689999999999999999999999999999999999999986543211 1
Q ss_pred hhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 863 SNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
...... ...+. ..........+.+++.+||+.||++|||++|+++
T Consensus 250 ---~~~~~~---~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 250 ---MKRLRD---SPPPK-LKNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp ---HHHHHH---SSCCC-CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---HHHHhc---CCCCC-cCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111 11111 1111122356888999999999999999999986
No 52
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.2e-41 Score=366.46 Aligned_cols=272 Identities=32% Similarity=0.494 Sum_probs=219.9
Q ss_pred CHHHHHHHhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccc
Q 044366 637 LYEEITKATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCS 716 (918)
Q Consensus 637 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 716 (918)
.+.++..++++|...+.||+|+||.||+|...+|+.||||++... .....+.+.+|+++++.++||||+++++++.
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 105 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE----SSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC----CSSHHHHHHHHHHGGGSCCCTTBCCEEEECC
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc----ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence 344556678999999999999999999999888999999987653 2334678999999999999999999999999
Q ss_pred cCCceEEEEEeccCCChhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEec
Q 044366 717 NAQHSFIVCEYLARGSLTTILRDDA-AAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSD 795 (918)
Q Consensus 717 ~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 795 (918)
+++..++||||+++|+|.+++.... ....+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D 182 (321)
T 2qkw_B 106 ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITD 182 (321)
T ss_dssp CTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECC
T ss_pred CCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEee
Confidence 9999999999999999999997653 233589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCC--CceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhh--hhhhhhH-----
Q 044366 796 FGFAKFLEPHSS--NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIF--SSISNMI----- 866 (918)
Q Consensus 796 fG~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~--~~~~~~~----- 866 (918)
||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .......
T Consensus 183 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 262 (321)
T 2qkw_B 183 FGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262 (321)
T ss_dssp CTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT
T ss_pred cccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc
Confidence 999987543222 2234568999999999998899999999999999999999999976432210 0000000
Q ss_pred hhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 867 IEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.......+.... .....+....+.+++.+||+.||++|||++|+++.|+
T Consensus 263 ~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 263 GQLEQIVDPNLA--DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp TCCCSSSSSSCT--TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccHHHhcChhhc--cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 001111122111 1223566778999999999999999999999999886
No 53
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.4e-40 Score=358.27 Aligned_cols=277 Identities=31% Similarity=0.506 Sum_probs=224.5
Q ss_pred CccCHHHHHHHhcCCCCc------eeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCc
Q 044366 634 GKVLYEEITKATGNFGEK------YCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRN 707 (918)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n 707 (918)
..+.+.++..++.+|... +.||+|+||.||+|.. +++.||||++............+.+.+|+++++.++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 356789999999999888 8999999999999987 689999999876432233344678999999999999999
Q ss_pred eeeEecccccCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC
Q 044366 708 IIKFHGFCSNAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS 787 (918)
Q Consensus 708 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 787 (918)
|+++++++.+++..++||||+++|+|.+++........+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999998655556689999999999999999999999 9999999999999999
Q ss_pred CCcEEEeccccccccCCCCCC--ceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhh--hhhh
Q 044366 788 EYEAHVSDFGFAKFLEPHSSN--WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIF--SSIS 863 (918)
Q Consensus 788 ~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~--~~~~ 863 (918)
++.+||+|||++......... .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||+...... ..+.
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999999876543222 233568999999998865 57889999999999999999999986543211 0111
Q ss_pred hhH----hhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 864 NMI----IEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 864 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
... ......++.... .........+.+++.+||+.||.+|||++++++.|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~ 303 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMN---DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCS---CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred HHhhhhhhhhhhhcccccc---ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 100 011222222222 2234556789999999999999999999999999863
No 54
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=360.22 Aligned_cols=255 Identities=25% Similarity=0.420 Sum_probs=205.4
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|.. .+++.||+|++... .....+.|.+|+++++.++||||+++++++.+++..++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 84 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNF 84 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEE
Confidence 46788899999999999999965 57999999987542 23345789999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.++++.. ...+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 85 ITEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp EEECCTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred EEEecCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 99999999999999864 24589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCc--------------eecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhh
Q 044366 804 PHSSNW--------------TEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEV 869 (918)
Q Consensus 804 ~~~~~~--------------~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~ 869 (918)
...... ....||+.|+|||++.+..++.++||||||+++|||++|..|+...............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-- 237 (310)
T 3s95_A 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVR-- 237 (310)
T ss_dssp --------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHH--
T ss_pred cccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhh--
Confidence 432211 1457899999999999999999999999999999999999986543221111111000
Q ss_pred hhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 870 NQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.......+.. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 238 -~~~~~~~~~~------~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 238 -GFLDRYCPPN------CPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp -HHHHHTCCTT------CCTTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -ccccccCCCC------CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111111 1134788999999999999999999999885
No 55
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.5e-40 Score=363.78 Aligned_cols=256 Identities=21% Similarity=0.279 Sum_probs=208.3
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCC--CCChHHHHHHHHHHhhccCCceeeEecccccCCc
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDE--TANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 720 (918)
..++|.+.+.||+|+||.||+|.. .+|+.||+|+++....... ....+.+.+|+.+++.++||||+++++++.+++.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 346789999999999999999965 4799999999976433221 1235789999999999999999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC----cEEEecc
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY----EAHVSDF 796 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Df 796 (918)
.++||||+++|+|.+++... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 99999999999999999764 3589999999999999999999999 999999999999998877 7999999
Q ss_pred ccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 797 GFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 797 G~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
|++....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .. ...+....
T Consensus 164 G~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-~~-------~~~i~~~~ 234 (361)
T 2yab_A 164 GLAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ET-------LANITAVS 234 (361)
T ss_dssp SSCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HH-------HHHHHTTC
T ss_pred CCceEcCCCC-ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-HH-------HHHHHhcC
Confidence 9998776432 234567999999999999989999999999999999999999998654321 11 11111111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..............+.+++.+||..||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 235 YDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111111122356889999999999999999999975
No 56
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.2e-40 Score=366.95 Aligned_cols=256 Identities=23% Similarity=0.368 Sum_probs=207.1
Q ss_pred hcCCCCceeeccccceEEEEEEe--------CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEeccc
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL--------PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFC 715 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 715 (918)
.++|...+.||+|+||.||+|+. .++..||||+++... .....+.+.+|+++++.+ +||||+++++++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 156 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC---BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc---CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 46788999999999999999964 245679999987531 222356799999999999 899999999999
Q ss_pred ccCCceEEEEEeccCCChhHHhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCC
Q 044366 716 SNAQHSFIVCEYLARGSLTTILRDDAA-------------AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKN 782 (918)
Q Consensus 716 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 782 (918)
.+++..++||||+++|+|.++++.... ...+++.+++.++.||+.||+|||+. +|+||||||+|
T Consensus 157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~N 233 (370)
T 2psq_A 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 233 (370)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccchhh
Confidence 999999999999999999999986532 23589999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeccccccccCCCCC--CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhh
Q 044366 783 VLLDSEYEAHVSDFGFAKFLEPHSS--NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIF 859 (918)
Q Consensus 783 ill~~~~~~kl~DfG~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~ 859 (918)
|+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 234 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~- 312 (370)
T 2psq_A 234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE- 312 (370)
T ss_dssp EEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-
T ss_pred EEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence 9999999999999999987654332 2233456789999999999999999999999999999999 99997653221
Q ss_pred hhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 860 SSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
...... .....+..+.. ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 313 ----~~~~~~---~~~~~~~~~~~---~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~ 360 (370)
T 2psq_A 313 ----ELFKLL---KEGHRMDKPAN---CTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360 (370)
T ss_dssp ----GHHHHH---HTTCCCCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----HHHHHH---hcCCCCCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 11111111111 2346888999999999999999999999986
No 57
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=363.09 Aligned_cols=250 Identities=24% Similarity=0.364 Sum_probs=197.9
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
..++|...+.||+|+||.||+|.. .+|+.||||++...... ...+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~---~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~ 84 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG---SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIF 84 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 457899999999999999999964 68999999998764322 23467899999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+||||+++|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||++++++.+||+|||++...
T Consensus 85 lv~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~ 158 (347)
T 3zgw_A 85 MVLEYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKP 158 (347)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-
T ss_pred EEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccc
Confidence 9999999999999997643 489999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCC-CceecccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC
Q 044366 803 EPHSS-NWTEFAGTVGYAAPELAYTMRA-TEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP 880 (918)
Q Consensus 803 ~~~~~-~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (918)
..... ......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+..... .. ...+.......+
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~-----~~---~~~i~~~~~~~p 230 (347)
T 3zgw_A 159 KGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM-----AL---YKKIMRGKYDVP 230 (347)
T ss_dssp -------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HH---HHHHHHTCCCCC
T ss_pred cCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH-----HH---HHHHHcCCCCCC
Confidence 54322 2345678999999999988775 88999999999999999999998754321 11 111111222211
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
. . ....+.+++.+||+.||++|||++|+++
T Consensus 231 ~-~---~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 231 K-W---LSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp T-T---CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred C-C---CCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 1 1 1245778999999999999999999985
No 58
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.4e-40 Score=366.07 Aligned_cols=258 Identities=22% Similarity=0.269 Sum_probs=209.2
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccC-CCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSD-ETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++....... .....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 35789999999999999999965 579999999986543222 2234678999999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCc---EEEecccc
Q 044366 723 IVCEYLARGSLTTILRDDA-AAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYE---AHVSDFGF 798 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~DfG~ 798 (918)
+||||+++|+|.+++.... ....+++..++.++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999998886542 234589999999999999999999999 9999999999999987654 99999999
Q ss_pred ccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCC
Q 044366 799 AKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLP 878 (918)
Q Consensus 799 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (918)
+..............||+.|+|||++.+..++.++||||+||++|+|++|+.||...... . ...+......
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~-------~~~i~~~~~~ 250 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER--L-------FEGIIKGKYK 250 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH--H-------HHHHHHTCCC
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH--H-------HHHHHcCCCC
Confidence 988766544445567999999999999989999999999999999999999998754221 0 1111111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 879 TPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 879 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
............+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111122356889999999999999999999975
No 59
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.8e-40 Score=360.73 Aligned_cols=250 Identities=24% Similarity=0.391 Sum_probs=206.6
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
..++|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+++++.++||||+++++++...+..+
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 457899999999999999999965 6899999999876432 2223567889999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+||||+++|+|.+++...+ .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 91 lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 164 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF 164 (328)
T ss_dssp EEECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGG
T ss_pred EEEECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceec
Confidence 9999999999999997643 489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCceecccccccccccccccCCCC-cccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 803 EPHSSNWTEFAGTVGYAAPELAYTMRAT-EKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 803 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
... .......||+.|+|||++.+..++ .++||||+||++|||++|+.||+..... ... ..+.......+.
T Consensus 165 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~------~~i~~~~~~~p~ 235 (328)
T 3fe3_A 165 TVG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--ELR------ERVLRGKYRIPF 235 (328)
T ss_dssp SSS-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH------HHHHHCCCCCCT
T ss_pred CCC-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--HHH------HHHHhCCCCCCC
Confidence 543 234556799999999999888765 7999999999999999999998754321 111 111112221111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
. ....+.+++.+||+.||.+|||++|+++
T Consensus 236 -~---~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 236 -Y---MSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -T---SCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -C---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1 2245788999999999999999999975
No 60
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.7e-40 Score=366.52 Aligned_cols=255 Identities=25% Similarity=0.339 Sum_probs=202.9
Q ss_pred HhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCCce
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 721 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 721 (918)
..++|...++||+|+||.||+|+.. +++.||+|+++...... ....+.+.+|..+++++ +||||+++++++.+++..
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~-~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 128 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND-DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 128 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEE
Confidence 3467999999999999999999654 68899999998754332 23346788999999887 899999999999999999
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
++||||+++|+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 129 ~lV~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 129 FFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 9999999999999999764 3489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHh-hhhhhcccCCCCC
Q 044366 802 LEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMII-EVNQILDHRLPTP 880 (918)
Q Consensus 802 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 880 (918)
...........+||+.|+|||++.+..++.++||||+||++|||++|+.||............... ....+.......+
T Consensus 203 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p 282 (396)
T 4dc2_A 203 GLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP 282 (396)
T ss_dssp CCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCC
T ss_pred cccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCC
Confidence 544444556678999999999999999999999999999999999999998643221111010001 1111222222211
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCH
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARPTM 909 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~ 909 (918)
.. ....+.+++.+||+.||++||++
T Consensus 283 -~~---~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 283 -RS---LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -TT---SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -Cc---CCHHHHHHHHHHhcCCHhHcCCC
Confidence 11 22457889999999999999995
No 61
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.3e-40 Score=358.57 Aligned_cols=251 Identities=24% Similarity=0.301 Sum_probs=207.9
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|+. .+|+.||+|+++..... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence 36788999999999999999965 47999999999764322 22346788999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.+++... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 83 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 83 VMEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999999999764 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcc
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRD 883 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (918)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. . ..+.......+ ..
T Consensus 157 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~---~---~~i~~~~~~~p-~~ 227 (337)
T 1o6l_A 157 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RL---F---ELILMEEIRFP-RT 227 (337)
T ss_dssp CTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HH---H---HHHHHCCCCCC-TT
T ss_pred cCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--HH---H---HHHHcCCCCCC-CC
Confidence 5444555678999999999999999999999999999999999999998654321 01 1 11111111111 11
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 044366 884 VTDKLRSIMEVAILCLVENPEARP-----TMKEVCN 914 (918)
Q Consensus 884 ~~~~~~~l~~li~~cl~~dp~~RP-----t~~evl~ 914 (918)
....+.+++.+||+.||++|| +++|+++
T Consensus 228 ---~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 228 ---LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 224678899999999999999 8999875
No 62
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=354.66 Aligned_cols=265 Identities=20% Similarity=0.271 Sum_probs=209.9
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC--ce
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ--HS 721 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~ 721 (918)
.++|...+.||+|+||.||+|... +|+.||||++.... .....+.+.+|++++++++||||+++++++.... ..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 84 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS---FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG---GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccc---ccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceE
Confidence 357889999999999999999654 69999999987532 2234678899999999999999999999987654 77
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeee----CCCCcEEEeccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLL----DSEYEAHVSDFG 797 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~DfG 797 (918)
++||||+++|+|.+++........+++.+++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp EEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 99999999999999998765555589999999999999999999999 99999999999999 778889999999
Q ss_pred cccccCCCCCCceecccccccccccccc--------cCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhh
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAY--------TMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEV 869 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~ 869 (918)
+++....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||.................
T Consensus 162 ~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 240 (319)
T 4euu_A 162 AARELEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (319)
T ss_dssp TCEECCTTCC-BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred CceecCCCCc-eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence 9987765433 34457899999999886 56789999999999999999999999853322111111111000
Q ss_pred hhh-----------------cccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 044366 870 NQI-----------------LDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLL 916 (918)
Q Consensus 870 ~~~-----------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L 916 (918)
... .....+............+.+++.+||+.||++|||++|+++..
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 000 00112222233345667789999999999999999999999864
No 63
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.3e-40 Score=357.44 Aligned_cols=257 Identities=25% Similarity=0.365 Sum_probs=200.4
Q ss_pred hcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhh--ccCCceeeEeccccc----C
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTE--IRHRNIIKFHGFCSN----A 718 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~----~ 718 (918)
.++|...+.||+|+||.||+|+. +|+.||||++... ....+.+|.+++.. ++||||+++++++.. .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~ 78 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence 46899999999999999999987 7899999998642 24566777777766 799999999998643 3
Q ss_pred CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEcCCCCCCeeeCCCCc
Q 044366 719 QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLH--------HDCIPPIVHRDISSKNVLLDSEYE 790 (918)
Q Consensus 719 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~ 790 (918)
...++||||+++|+|.++++.. .+++..+++++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCC
Confidence 5689999999999999999643 4899999999999999999999 77 9999999999999999999
Q ss_pred EEEeccccccccCCCCCC----ceecccccccccccccccC------CCCcccchhhHHHHHHHHHhC----------CC
Q 044366 791 AHVSDFGFAKFLEPHSSN----WTEFAGTVGYAAPELAYTM------RATEKYDVYSFGVLALEVIKG----------YH 850 (918)
Q Consensus 791 ~kl~DfG~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~vl~el~tg----------~~ 850 (918)
+||+|||+++........ .....||+.|+|||++.+. .++.++||||||+++|||++| +.
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 999999999876544332 2234789999999999876 455799999999999999999 77
Q ss_pred CCCcchhhhhhhhhhHhhhhhhcccCCCCCCc--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 851 PGDFVSTIFSSISNMIIEVNQILDHRLPTPSR--DVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 851 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
||................ .. .....+..+. ........+.+++.+||+.||++|||++|+++.|++
T Consensus 232 pf~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDMRKV-VC-VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp TTTTTSCSSCCHHHHHHH-HT-TSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cccccCCCCcchhhhhHH-Hh-ccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 764332211111111111 11 1111111111 123456789999999999999999999999999863
No 64
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=373.41 Aligned_cols=256 Identities=22% Similarity=0.310 Sum_probs=208.1
Q ss_pred HHhcCCCCceeeccccceEEEEEE-eCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCce
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAE-LPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 721 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 721 (918)
...++|...+.||+|+||.||+|. ..+|+.||+|++...... ....+.+.+|+++++.++||||+++++++.+++..
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 85 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS--ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHH 85 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH--HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEE
Confidence 345779999999999999999995 457999999998754221 12246789999999999999999999999999999
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeC---CCCcEEEecccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLD---SEYEAHVSDFGF 798 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~DfG~ 798 (918)
++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++ .++.+||+|||+
T Consensus 86 ~lv~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~ 159 (444)
T 3soa_A 86 YLIFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGL 159 (444)
T ss_dssp EEEECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred EEEEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCce
Confidence 99999999999999997643 489999999999999999999999 999999999999998 457899999999
Q ss_pred ccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCC
Q 044366 799 AKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLP 878 (918)
Q Consensus 799 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (918)
+..............||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .. . ..+......
T Consensus 160 a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~-~~----~---~~i~~~~~~ 231 (444)
T 3soa_A 160 AIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH-RL----Y---QQIKAGAYD 231 (444)
T ss_dssp CBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HH----H---HHHHHTCCC
T ss_pred eEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH-HH----H---HHHHhCCCC
Confidence 988776555555678999999999999989999999999999999999999998654321 01 1 111111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 879 TPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 879 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.+..........+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 232 FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 111122223356888999999999999999999986
No 65
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-40 Score=360.21 Aligned_cols=251 Identities=20% Similarity=0.278 Sum_probs=206.8
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|.. .+|+.||+|.+... ......+.+|+++++.++||||+++++++.+.+..++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 78 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEE
Confidence 46789999999999999999965 46889999998642 2234678999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC--CCcEEEeccccccc
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS--EYEAHVSDFGFAKF 801 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~DfG~~~~ 801 (918)
||||+++|+|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++..
T Consensus 79 v~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 79 IFEFISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp EECCCCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 99999999999999754 23589999999999999999999999 9999999999999987 78999999999988
Q ss_pred cCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 802 LEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 802 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
..+. .......||+.|+|||++.+..++.++||||+||++|+|++|..||...... . ....+.........
T Consensus 154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~-------~~~~i~~~~~~~~~ 224 (321)
T 1tki_A 154 LKPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-Q-------IIENIMNAEYTFDE 224 (321)
T ss_dssp CCTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-H-------HHHHHHHTCCCCCH
T ss_pred CCCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-H-------HHHHHHcCCCCCCh
Confidence 7643 3345567899999999999888899999999999999999999998654321 1 11111122222111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.........+.+++.+|++.||++|||+.|+++
T Consensus 225 ~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 225 EAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111223456889999999999999999999986
No 66
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=362.21 Aligned_cols=254 Identities=28% Similarity=0.444 Sum_probs=202.9
Q ss_pred hcCCCCceeeccccceEEEEEEeC----CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCc
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP----SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 720 (918)
.++|.+.+.||+|+||.||+|... .+..||||+++... .....+.|.+|+++++.++||||+++++++.+++.
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY---TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 356888899999999999999763 34569999987532 22235679999999999999999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
.++||||+++|+|.++++.. ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred cEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999999754 24589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCc---eecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 801 FLEPHSSNW---TEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 801 ~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
......... ....+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ......... ..
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~~~~~--~~ 272 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DVISSVEEG--YR 272 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHHHHHHTT--CC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHHcC--CC
Confidence 775443221 22345778999999998899999999999999999999 99998654321 011111111 11
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.+. ... ....+.+++.+||+.||++|||++|+++.|+
T Consensus 273 ~~~-~~~---~~~~l~~li~~~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 273 LPA-PMG---CPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp CCC-CTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC-CCC---cCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111 111 2346888999999999999999999999986
No 67
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.8e-40 Score=355.16 Aligned_cols=262 Identities=19% Similarity=0.304 Sum_probs=203.3
Q ss_pred HhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
..++|...+.||+|+||.||+|+..+|+.||+|++.... ......+.+.+|++++++++||||+++++++.+++..++
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDA--EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccc--ccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 347899999999999999999988889999999987542 122234678999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++ +|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 97 v~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 97 VFEFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp EEECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred EEcCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 9999985 8888886542 4589999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCCceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhh----------
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQI---------- 872 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---------- 872 (918)
..........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ............
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 249 (311)
T 3niz_A 171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQE 249 (311)
T ss_dssp SCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTT
T ss_pred CCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhc
Confidence 55555556678999999999876 568999999999999999999999986543211 111110000000
Q ss_pred ----cccCCCCCCcc-h----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 873 ----LDHRLPTPSRD-V----TDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 873 ----~~~~~~~~~~~-~----~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
........... . .....++.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000000000 0 012246789999999999999999999986
No 68
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=6.7e-40 Score=347.23 Aligned_cols=254 Identities=25% Similarity=0.402 Sum_probs=208.7
Q ss_pred HhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
..++|...+.||+|+||.||+|+..+++.||+|+++.. ....+++.+|++++++++||||+++++++.+++..++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 80 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG-----SMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYI 80 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBT-----TBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccC-----CCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEE
Confidence 34678899999999999999999888889999998653 2345789999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++++|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 155 (268)
T 3sxs_A 81 VTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL 155 (268)
T ss_dssp EEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECC
T ss_pred EEEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecc
Confidence 99999999999999764 23589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC-ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 804 PHSSN-WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 804 ~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
..... .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||+...... ..... ........+
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~---~~~~~~~~~ 227 (268)
T 3sxs_A 156 DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE-----VVLKV---SQGHRLYRP 227 (268)
T ss_dssp TTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHHH---HTTCCCCCC
T ss_pred hhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH-----HHHHH---HcCCCCCCC
Confidence 43321 123345678999999998889999999999999999999 999986543211 11111 111111111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
... ...+.+++.+||+.||++|||++|+++.|++
T Consensus 228 ~~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (268)
T 3sxs_A 228 HLA---SDTIYQIMYSCWHELPEKRPTFQQLLSSIEP 261 (268)
T ss_dssp TTS---CHHHHHHHHHTTCSSGGGSCCHHHHHHHHGG
T ss_pred CcC---hHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111 2457889999999999999999999999863
No 69
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.4e-40 Score=354.05 Aligned_cols=259 Identities=24% Similarity=0.331 Sum_probs=204.1
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|.+.+.||+|+||.||+|+. .+++.||+|++...... .....+.|.+|+.+++.++||||+++++++.+++..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPRE-KEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSC-CHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccc-cHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 46799999999999999999964 57999999998653221 22234678999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 89 v~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 999999999999997653 489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC-C
Q 044366 804 PHSS-NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP-S 881 (918)
Q Consensus 804 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 881 (918)
.... ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||........... ......+.. .
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~--------~~~~~~~~~~~ 234 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK--------HIQDSVPNVTT 234 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHH--------HHSSCCCCHHH
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH--------HhhccCCCcch
Confidence 4332 23345689999999999999999999999999999999999999875443211111 111111110 0
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHhhC
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARP-TMKEVCNLLCK 918 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RP-t~~evl~~L~~ 918 (918)
.........+.+++.+|++.||++|| +++++.+.|++
T Consensus 235 ~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 235 DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 00111235688899999999999999 89999888753
No 70
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.6e-40 Score=357.07 Aligned_cols=255 Identities=21% Similarity=0.309 Sum_probs=206.9
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCC--CCChHHHHHHHHHHhhccCCceeeEecccccCCce
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDE--TANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 721 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 721 (918)
.++|...+.||+|+||.||+|.. .+|+.||+|++........ ....+.+.+|+.+++.++||||+++++++.+++..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 35688999999999999999965 4799999999876433221 22467899999999999999999999999999999
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC----cEEEeccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY----EAHVSDFG 797 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~DfG 797 (918)
++||||+++|+|.+++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 9999999999999999754 3589999999999999999999999 999999999999999887 79999999
Q ss_pred cccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .... .+.....
T Consensus 164 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~-------~~~~~~~ 234 (326)
T 2y0a_A 164 LAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLA-------NVSAVNY 234 (326)
T ss_dssp TCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHH-------HHHHTCC
T ss_pred CCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-HHHH-------HHHhcCC
Confidence 998775432 234467999999999999889999999999999999999999998643321 1111 1111111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.............+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111111122356789999999999999999999986
No 71
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.3e-40 Score=362.21 Aligned_cols=265 Identities=26% Similarity=0.365 Sum_probs=203.5
Q ss_pred HhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC----
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ---- 719 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 719 (918)
..++|...+.||+|+||.||+|+.. ++.||||++.... .....+..|+.++++++||||+++++++....
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDV 95 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCc
Confidence 3467899999999999999999874 7999999986531 22345677888899999999999999997644
Q ss_pred ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC-------CCCeEEcCCCCCCeeeCCCCcEE
Q 044366 720 HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDC-------IPPIVHRDISSKNVLLDSEYEAH 792 (918)
Q Consensus 720 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------~~~ivH~dlk~~Nill~~~~~~k 792 (918)
..++||||+++|+|.++++.. .+++.+++.++.|+++||+|||+.+ .++|+||||||+||+++.++.+|
T Consensus 96 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 96 DLWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp EEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred eEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence 369999999999999999763 3899999999999999999999862 23899999999999999999999
Q ss_pred EeccccccccCCCCCC--ceeccccccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhh--hhh
Q 044366 793 VSDFGFAKFLEPHSSN--WTEFAGTVGYAAPELAYT-----MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFS--SIS 863 (918)
Q Consensus 793 l~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~--~~~ 863 (918)
|+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ...
T Consensus 172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~ 251 (322)
T 3soc_A 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251 (322)
T ss_dssp ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH
T ss_pred EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh
Confidence 9999999876544322 233578999999999876 3556789999999999999999999864322100 000
Q ss_pred -----hhHhhhh-hhcccCC-CCCCc--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 864 -----NMIIEVN-QILDHRL-PTPSR--DVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 864 -----~~~~~~~-~~~~~~~-~~~~~--~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
....... ....... +.... ........+.+++.+||+.||++|||++|+++.|++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 252 EIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315 (322)
T ss_dssp HHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 0000111 1111111 11111 122345679999999999999999999999999863
No 72
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5e-40 Score=348.37 Aligned_cols=252 Identities=23% Similarity=0.373 Sum_probs=207.5
Q ss_pred hcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
.++|...+.||+|+||.||+|...+++.||+|++... ....+++.+|++++++++||||+++++++.+++..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-----AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 83 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT-----SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccc-----ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEE
Confidence 3578888999999999999998888999999998753 23457899999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
|||+++|+|.+++.... ..+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 84 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EEeCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 99999999999997643 4589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCc
Q 044366 805 HSS-NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSR 882 (918)
Q Consensus 805 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (918)
... ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ........ ......+.
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-----~~~~~~~~---~~~~~~~~ 230 (269)
T 4hcu_A 159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDIST---GFRLYKPR 230 (269)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHT---TCCCCCCT
T ss_pred cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHHHhc---CccCCCCC
Confidence 221 1223456778999999999999999999999999999999 99998654321 11111111 11111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 883 DVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 883 ~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.. ...+.+++.+||+.||++|||++|+++.|+
T Consensus 231 ~~---~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 262 (269)
T 4hcu_A 231 LA---STHVYQIMNHCWRERPEDRPAFSRLLRQLA 262 (269)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cC---CHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 11 245788999999999999999999999986
No 73
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7.4e-40 Score=347.56 Aligned_cols=257 Identities=24% Similarity=0.377 Sum_probs=194.9
Q ss_pred hcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
.++|...+.||+|+||.||+|.. .|+.||||+++...........+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 36788899999999999999987 48999999987654444445567899999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC--------CCcEEEecc
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS--------EYEAHVSDF 796 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--------~~~~kl~Df 796 (918)
|||+++++|.+++.. ..+++.+++.++.|+++||+|||+....+|+||||||+||+++. ++.+||+||
T Consensus 85 ~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999864 34899999999999999999999992222999999999999986 678999999
Q ss_pred ccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 797 GFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 797 G~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
|++........ ....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||.......... .......
T Consensus 161 g~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-------~~~~~~~ 231 (271)
T 3dtc_A 161 GLAREWHRTTK--MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY-------GVAMNKL 231 (271)
T ss_dssp CC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH-------HHHTSCC
T ss_pred Ccccccccccc--cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------hhhcCCC
Confidence 99987654322 24578999999999999899999999999999999999999987543221110 0000111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
....... ....+.+++.+||+.||++|||+.|+++.|++
T Consensus 232 ~~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 232 ALPIPST---CPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp CCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred CCCCCcc---cCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 1111111 22468889999999999999999999999874
No 74
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.1e-39 Score=357.47 Aligned_cols=251 Identities=18% Similarity=0.348 Sum_probs=202.7
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC----
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ---- 719 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 719 (918)
.++|+..+.||+|+||.||+|+.. +|+.||||+++... .....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence 457889999999999999999765 89999999987532 3334578999999999999999999999875433
Q ss_pred -----------------------------------------------------ceEEEEEeccCCChhHHhhcccccCCC
Q 044366 720 -----------------------------------------------------HSFIVCEYLARGSLTTILRDDAAAKEF 746 (918)
Q Consensus 720 -----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~l 746 (918)
..++||||+++|+|.+++.........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 161 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR 161 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence 379999999999999999887666667
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCCCCC------------Cceeccc
Q 044366 747 SWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEPHSS------------NWTEFAG 814 (918)
Q Consensus 747 ~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~~~~------------~~~~~~g 814 (918)
++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ......|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 8888999999999999999999 999999999999999999999999999988765421 1233568
Q ss_pred ccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHH
Q 044366 815 TVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEV 894 (918)
Q Consensus 815 ~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 894 (918)
|+.|+|||++.+..++.++||||+|+++|||++|..|+..... . ......... +.........+.++
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~-------~---~~~~~~~~~---~~~~~~~~~~~~~l 305 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR-------I---ITDVRNLKF---PLLFTQKYPQEHMM 305 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH-------H---HHHHHTTCC---CHHHHHHCHHHHHH
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH-------H---HHHhhccCC---CcccccCChhHHHH
Confidence 9999999999999999999999999999999999877321111 0 111111111 12233445677899
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 044366 895 AILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 895 i~~cl~~dp~~RPt~~evl~ 914 (918)
+.+||+.||++|||++|+++
T Consensus 306 i~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHccCCCCcCCCHHHHhh
Confidence 99999999999999999986
No 75
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=7.1e-40 Score=358.70 Aligned_cols=254 Identities=26% Similarity=0.344 Sum_probs=202.1
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCCceE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 722 (918)
.++|...+.||+|+||.||+|+.. +|+.||+|+++...... ....+.+.+|..+++++ +||||+++++++.+.+..+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 86 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND-DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 86 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCS-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcc-hHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence 357889999999999999999664 68999999997643222 22245688999999888 8999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+||||+++|+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 87 lv~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 999999999999999764 3489999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhH-hhhhhhcccCCCCCC
Q 044366 803 EPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMI-IEVNQILDHRLPTPS 881 (918)
Q Consensus 803 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 881 (918)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||.............. .....+.......+
T Consensus 161 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p- 239 (345)
T 3a8x_A 161 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP- 239 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC-
T ss_pred cCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC-
Confidence 4444445567899999999999999999999999999999999999999864321110000000 01111112222111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCH
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTM 909 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~ 909 (918)
.. ....+.+++.+||+.||++||++
T Consensus 240 ~~---~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 240 RS---LSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp TT---SCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CC---CCHHHHHHHHHHhcCCHhHCCCC
Confidence 11 22457889999999999999995
No 76
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=369.40 Aligned_cols=328 Identities=23% Similarity=0.217 Sum_probs=295.7
Q ss_pred CCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccC
Q 044366 23 LQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLND 102 (918)
Q Consensus 23 L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~ 102 (918)
-+.++.++++++ .+|..+. +++++|+|++|++++..|..|..+++|++|++++|.+++..|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 357888888887 6777664 5889999999999877788899999999999999999888888999999999999999
Q ss_pred CcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCC
Q 044366 103 NSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIP 182 (918)
Q Consensus 103 n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 182 (918)
|++....+..|.++++|++|+|++|++++..+..|.++++|++|++++|.++++.+..|.++++|++|++++|+++++.+
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 99987777788899999999999999998888889999999999999999998888899999999999999999998877
Q ss_pred ccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCC
Q 044366 183 LSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKS 262 (918)
Q Consensus 183 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 262 (918)
..|..+++|+.|++++|.+.+..+..|..+++|+.|++++|...+..+..+....+|++|++++|+++.+.+..+..+++
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 249 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY 249 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc
Confidence 78899999999999999999888888999999999999998877666666666679999999999999877778999999
Q ss_pred CCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCC
Q 044366 263 LSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQ 342 (918)
Q Consensus 263 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 342 (918)
|+.|++++|++.+..+..|..+++|+.|++++|++.+..|..|.++++|++|++++|.+..++...|..+++|+.|++++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 329 (477)
T 2id5_A 250 LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 329 (477)
T ss_dssp CCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCS
T ss_pred cCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccC
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCccc
Q 044366 343 NNFYCEISFNW 353 (918)
Q Consensus 343 N~l~~~~~~~~ 353 (918)
|++.|+|...|
T Consensus 330 N~l~c~c~~~~ 340 (477)
T 2id5_A 330 NPLACDCRLLW 340 (477)
T ss_dssp SCEECSGGGHH
T ss_pred CCccCccchHh
Confidence 99999987655
No 77
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=361.97 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=201.6
Q ss_pred HHhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCCc
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 720 (918)
...++|...+.||+|+||.||+|+. .+|+.||||+++...... ....+.+.+|..+++.+ +||||+++++++.+.+.
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~-~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 98 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQ-DDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR 98 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-HTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcc-hhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE
Confidence 3457899999999999999999965 468999999997643222 23356788999999988 79999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
.++||||+++|+|.+++... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 99 ~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~ 172 (353)
T 3txo_A 99 LFFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK 172 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEcccccee
Confidence 99999999999999999764 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP 880 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (918)
............+||+.|+|||++.+..++.++||||+||++|||++|+.||...... . . ...+.......+
T Consensus 173 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~----~---~~~i~~~~~~~p 244 (353)
T 3txo_A 173 EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-D----L---FEAILNDEVVYP 244 (353)
T ss_dssp CSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-H----H---HHHHHHCCCCCC
T ss_pred ecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-H----H---HHHHHcCCCCCC
Confidence 6554444455678999999999999989999999999999999999999998754321 1 1 111112222211
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARPTM------KEVCN 914 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~------~evl~ 914 (918)
. . ....+.+++.+|++.||++||++ +|+++
T Consensus 245 ~-~---~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 T-W---LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp T-T---SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred C-C---CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1 1 22457889999999999999998 66654
No 78
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.1e-39 Score=350.22 Aligned_cols=261 Identities=18% Similarity=0.287 Sum_probs=203.3
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
++|+..+.||+|+||.||+|.. .+|+.||||+++... ......+.+.+|++++++++||||+++++++.+++..++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD--DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC--SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccC--CcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence 5788999999999999999965 478999999987642 2223357889999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
|||+++ ++.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~-~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EECCSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred EecCCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 999986 666665543 24589999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCceecccccccccccccccCC-CCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCC------
Q 044366 805 HSSNWTEFAGTVGYAAPELAYTMR-ATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRL------ 877 (918)
Q Consensus 805 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------ 877 (918)
.........||+.|+|||++.+.. ++.++||||+||++|||++|..|+........................+
T Consensus 154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence 555556668899999999998766 7999999999999999999988853333222222211111000000000
Q ss_pred ------------CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 878 ------------PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 878 ------------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.............+.+++.+|++.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000011123356789999999999999999999985
No 79
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.3e-38 Score=361.75 Aligned_cols=235 Identities=20% Similarity=0.199 Sum_probs=150.8
Q ss_pred CCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCcc
Q 044366 9 LFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSS 88 (918)
Q Consensus 9 ~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~ 88 (918)
..+..|..++++++|++|+|++|++++ +| +++.+++|++|+|++|++++ +| ++.+++|++|++++|.+++. |
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--
T ss_pred cCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--
Confidence 344455567778888888888888874 45 67888888888888888774 44 67777777777777777743 3
Q ss_pred ccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccC
Q 044366 89 LGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLL 168 (918)
Q Consensus 89 l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 168 (918)
++.+++|++|++++|++++. | +..+++|++|++++|++++. .++++++|++|++++|+..+.. .++.+++|+
T Consensus 102 ~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~ 173 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLT 173 (457)
T ss_dssp CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCC
T ss_pred cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCC
Confidence 66777777777777777653 3 66777777777777777653 2666677777777777433232 356666666
Q ss_pred eeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCc
Q 044366 169 QLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNR 248 (918)
Q Consensus 169 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 248 (918)
+|++++|+++++ | +..+++|+.|++++|++++. .+..+++|++|++++|+++++ | +..+++|+.|++++|+
T Consensus 174 ~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~ 244 (457)
T 3bz5_A 174 TLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNP 244 (457)
T ss_dssp EEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSC
T ss_pred EEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCc
Confidence 666666666654 2 55666666666666666643 255666666666666666652 2 5555666666666666
Q ss_pred CcCCCCccccccCCCCeEecCCC
Q 044366 249 LYGFVPKEIGYLKSLSKLEFCAN 271 (918)
Q Consensus 249 l~~~~~~~~~~l~~L~~L~l~~n 271 (918)
+++.. +..+++|+.|++++|
T Consensus 245 l~~~~---~~~l~~L~~L~l~~n 264 (457)
T 3bz5_A 245 LTELD---VSTLSKLTTLHCIQT 264 (457)
T ss_dssp CSCCC---CTTCTTCCEEECTTC
T ss_pred CCCcC---HHHCCCCCEEeccCC
Confidence 65543 234455555555443
No 80
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.2e-39 Score=348.94 Aligned_cols=260 Identities=23% Similarity=0.310 Sum_probs=200.4
Q ss_pred cCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVC 725 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 725 (918)
++|...+.||+|+||.||+|+..+|+.||+|+++.... .....+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccc--ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 57888999999999999999878899999999875432 2233478899999999999999999999999999999999
Q ss_pred EeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCCC
Q 044366 726 EYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEPH 805 (918)
Q Consensus 726 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~~ 805 (918)
||+++ +|.+++.... ..+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 80 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 80 EHLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp ECCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred EecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 99986 9999987542 4589999999999999999999999 9999999999999999999999999999877654
Q ss_pred CCCceecccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhh-------------
Q 044366 806 SSNWTEFAGTVGYAAPELAYTM-RATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQ------------- 871 (918)
Q Consensus 806 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~------------- 871 (918)
........||+.|+|||++.+. .++.++||||+||++|||++|+.||....... ...........
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T 1ob3_A 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELP 232 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhccc
Confidence 4444556789999999998764 58999999999999999999999987543211 11111000000
Q ss_pred hcccCCCCC-----CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 872 ILDHRLPTP-----SRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 872 ~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..+...... ..........+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000000 0000112356789999999999999999999985
No 81
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.8e-40 Score=366.54 Aligned_cols=255 Identities=25% Similarity=0.394 Sum_probs=205.3
Q ss_pred HhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
..++|...+.||+|+||.||+|... +++.||||+++... .....++|.+|++++++++||||+++++++.+++..+
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 188 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL---PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY 188 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS---CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcE
Confidence 3467888999999999999999765 79999999986531 1122356889999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+||||+++|+|.++++.. ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 189 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~ 263 (377)
T 3cbl_A 189 IVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREE 263 (377)
T ss_dssp EEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceec
Confidence 999999999999999764 23589999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCCc--eecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCC
Q 044366 803 EPHSSNW--TEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPT 879 (918)
Q Consensus 803 ~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (918)
....... ....+++.|+|||++.+..++.++|||||||++|||++ |..||...... .... .... ..+.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~---~~~~--~~~~~~ 336 (377)
T 3cbl_A 264 ADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTRE---FVEK--GGRLPC 336 (377)
T ss_dssp TTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHH---HHHT--TCCCCC
T ss_pred CCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH---HHHc--CCCCCC
Confidence 4321111 12235778999999998899999999999999999998 99998654321 1111 1111 111221
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 880 PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 880 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
+ ... ...+.+++.+||+.||++|||++++++.|+
T Consensus 337 ~-~~~---~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 337 P-ELC---PDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp C-TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C-CCC---CHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 1 112 245788999999999999999999999886
No 82
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=5.2e-40 Score=364.16 Aligned_cols=254 Identities=27% Similarity=0.459 Sum_probs=194.8
Q ss_pred hcCCCCceeeccccceEEEEEEeC----CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCc
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP----SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 720 (918)
..+|...+.||+|+||.||+|+.. ++..||||+++... .....++|.+|++++++++||||+++++++.+++.
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 120 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCc
Confidence 357899999999999999999764 57789999986531 22235679999999999999999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
.++||||+++|+|.++++.. ...+++.+++.++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 121 VMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 99999999999999999764 34589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 801 FLEPHSSN---WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 801 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... . ........ .+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~---~~~~i~~~--~~ 268 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--D---VIKAVDEG--YR 268 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--H---HHHHHHTT--EE
T ss_pred ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--H---HHHHHHcC--CC
Confidence 77543221 122335678999999999999999999999999999998 99998644321 1 11111111 11
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.+.+ . .....+.+++.+||+.||++||+++||++.|+
T Consensus 269 ~~~~-~---~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 269 LPPP-M---DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp CCCC-T---TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC-c---cccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence 1111 1 12346888999999999999999999999885
No 83
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.9e-38 Score=363.88 Aligned_cols=345 Identities=28% Similarity=0.422 Sum_probs=171.0
Q ss_pred CCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeee
Q 044366 92 LSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLD 171 (918)
Q Consensus 92 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (918)
+++|+.|++++|.+.. .| .+..+++|++|+|++|.+++..+ +.++++|++|++++|.+++..+ ++.+++|++|+
T Consensus 45 l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 3455555555555542 23 24455555555555555553322 5555555555555555554433 55555555555
Q ss_pred ccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcC
Q 044366 172 LSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYG 251 (918)
Q Consensus 172 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 251 (918)
+++|+++++.+ +..+++|++|++++|.+++. ..+..+++|++|+++ |.+.... .+.++++|+.|++++|.+++
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC--GGGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCCC--hhhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCC
Confidence 55555554432 55555555555555555532 235555555555554 3333221 25555666666666666553
Q ss_pred CCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCC
Q 044366 252 FVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGD 331 (918)
Q Consensus 252 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 331 (918)
. ..+..+++|++|++++|.+.+..+ +..+++|+.|++++|++.+. ..+..+++|+.|++++|.+....+ +..
T Consensus 192 ~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~ 263 (466)
T 1o6v_A 192 I--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSG 263 (466)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT
T ss_pred C--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhc
Confidence 3 234555555555555555554433 34445555555555544432 223334444444444444333322 333
Q ss_pred CCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchhhccccCcee
Q 044366 332 HPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLI 411 (918)
Q Consensus 332 l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 411 (918)
+++|+.|++ ++|.+.+..+ +..+++|+.|+
T Consensus 264 l~~L~~L~l------------------------------------------------~~n~l~~~~~--~~~l~~L~~L~ 293 (466)
T 1o6v_A 264 LTKLTELKL------------------------------------------------GANQISNISP--LAGLTALTNLE 293 (466)
T ss_dssp CTTCSEEEC------------------------------------------------CSSCCCCCGG--GTTCTTCSEEE
T ss_pred CCCCCEEEC------------------------------------------------CCCccCcccc--ccCCCccCeEE
Confidence 333333333 3333332222 33334444444
Q ss_pred cccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCC
Q 044366 412 LSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQE 491 (918)
Q Consensus 412 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 491 (918)
+++|++.+..+ +..+++|++|+|++|.+++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~ 367 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISD 367 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCB
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCc
Confidence 44444433322 4445555555555555554433 45555555555555555543 345555566666666666555
Q ss_pred CCchhccccCCcceEecCCCcccc
Q 044366 492 EIPPQICKMESLEKLNLSHNNLSD 515 (918)
Q Consensus 492 ~~~~~~~~l~~L~~L~L~~N~l~~ 515 (918)
..| +..+++|+.|++++|++++
T Consensus 368 ~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 368 LTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CGG--GTTCTTCCEEECCCEEEEC
T ss_pred cch--hhcCCCCCEEeccCCcccC
Confidence 444 5555566666666665555
No 84
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=7.2e-40 Score=361.46 Aligned_cols=254 Identities=23% Similarity=0.349 Sum_probs=206.5
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
..++|...+.||+|+||.||+|.. .+|+.||+|++..... .....+.+.+|+++++.++||||+++++++.+++..+
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 456799999999999999999965 4799999999875322 1123467899999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC---cEEEeccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY---EAHVSDFGFA 799 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~DfG~~ 799 (918)
+||||+++|+|.+++... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 105 lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EEECCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 999999999999998754 3489999999999999999999999 999999999999998654 5999999999
Q ss_pred cccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCC
Q 044366 800 KFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPT 879 (918)
Q Consensus 800 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (918)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... . .. ..+.......
T Consensus 179 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-~----~~---~~i~~~~~~~ 249 (362)
T 2bdw_A 179 IEVNDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-R----LY---AQIKAGAYDY 249 (362)
T ss_dssp BCCTTCC-SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-H----HH---HHHHHTCCCC
T ss_pred eEecCCc-ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-H----HH---HHHHhCCCCC
Confidence 8776432 334567999999999999989999999999999999999999998654321 0 11 1111111221
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 880 PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 880 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
+..........+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 22222233456889999999999999999999875
No 85
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8.7e-39 Score=363.25 Aligned_cols=269 Identities=19% Similarity=0.200 Sum_probs=132.0
Q ss_pred CCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCC
Q 044366 62 PPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLS 141 (918)
Q Consensus 62 p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~ 141 (918)
+..++.+++|++|++++|.+++ +| ++..+++|++|+|++|++++. | ++.+++|++|++++|++++. + +++++
T Consensus 35 ~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~ 106 (457)
T 3bz5_A 35 TISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLT 106 (457)
T ss_dssp EEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCT
T ss_pred ccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCC
Confidence 3344455555555555555553 23 455555555555555555432 2 44555555555555555532 1 44455
Q ss_pred CCceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecc
Q 044366 142 NLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLH 221 (918)
Q Consensus 142 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 221 (918)
+|++|++++|+++++ + ++.+++|++|++++|+++++ .+..+++|++|++++|...+.+
T Consensus 107 ~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~---------------- 164 (457)
T 3bz5_A 107 KLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL---------------- 164 (457)
T ss_dssp TCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC----------------
T ss_pred cCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc----------------
Confidence 555555555555432 1 44445555555555554443 1444444444444444322222
Q ss_pred cccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCC
Q 044366 222 INQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPI 301 (918)
Q Consensus 222 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 301 (918)
.+..+++|++|++++|+++++ | +..+++|+.|++++|++.+. .+..+++|+.|++++|++++ +
T Consensus 165 ----------~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-i 227 (457)
T 3bz5_A 165 ----------DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-I 227 (457)
T ss_dssp ----------CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-C
T ss_pred ----------ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-c
Confidence 244445555555555555442 1 44445555555555555443 24445555555555555554 2
Q ss_pred CccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCC
Q 044366 302 PKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSS 381 (918)
Q Consensus 302 ~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~ 381 (918)
| +..+++|+.|++++|.+..++ +..+++|+.|++++|++ +.+++++|.+.+.+| ++.++
T Consensus 228 p--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~L--------------~~L~l~~n~~~~~~~--~~~l~ 286 (457)
T 3bz5_A 228 D--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTDL--------------LEIDLTHNTQLIYFQ--AEGCR 286 (457)
T ss_dssp C--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCCC--------------SCCCCTTCTTCCEEE--CTTCT
T ss_pred C--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCCC--------------CEEECCCCccCCccc--ccccc
Confidence 3 455555555555555555543 33455666666665532 345555555444443 34455
Q ss_pred CCcEEEccCceeccccc
Q 044366 382 KLQVLDLSSNHIFGKIP 398 (918)
Q Consensus 382 ~L~~L~L~~N~l~~~~~ 398 (918)
+|+.|++++|...+.+|
T Consensus 287 ~L~~L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 287 KIKELDVTHNTQLYLLD 303 (457)
T ss_dssp TCCCCCCTTCTTCCEEE
T ss_pred cCCEEECCCCcccceec
Confidence 66666666665444333
No 86
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.4e-40 Score=357.37 Aligned_cols=249 Identities=22% Similarity=0.310 Sum_probs=203.0
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|.+.+.||+|+||.||+|.. .+|+.||||++....... ......+.+|+.+++.++||||+++++++.+++..++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK-SDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccc-hhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 36899999999999999999965 689999999987643322 2335678999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+ +|+|.+++... ..+++.+++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 87 v~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp EECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EEECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 99999 67999988764 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceecccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCc
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMRA-TEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSR 882 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (918)
... ......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+..... .. ...+...... .+.
T Consensus 160 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-----~~---~~~i~~~~~~-~p~ 229 (336)
T 3h4j_B 160 DGN-FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-----NL---FKKVNSCVYV-MPD 229 (336)
T ss_dssp TSB-TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-----TC---BCCCCSSCCC-CCT
T ss_pred CCc-ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-----HH---HHHHHcCCCC-Ccc
Confidence 432 2344579999999999988776 68999999999999999999998643211 00 0111111111 111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 883 DVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 883 ~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
. ....+.+++.+||+.||.+|||++|+++
T Consensus 230 ~---~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 230 F---LSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp T---SCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred c---CCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1 2245788999999999999999999875
No 87
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=348.73 Aligned_cols=253 Identities=22% Similarity=0.323 Sum_probs=198.1
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCC----------------------CCChHHHHHHHHHHh
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDE----------------------TANPSEFLNEVLALT 701 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~----------------------~~~~~~~~~e~~~l~ 701 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++........ ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46899999999999999999964 5789999999865432111 112467899999999
Q ss_pred hccCCceeeEeccccc--CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCC
Q 044366 702 EIRHRNIIKFHGFCSN--AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDIS 779 (918)
Q Consensus 702 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 779 (918)
.++||||+++++++.+ .+..++||||+++|+|.++... ..+++.+++.++.|+++||+|||+. +|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999876 5678999999999999887643 3589999999999999999999999 99999999
Q ss_pred CCCeeeCCCCcEEEeccccccccCCCCCCceecccccccccccccccCC---CCcccchhhHHHHHHHHHhCCCCCCcch
Q 044366 780 SKNVLLDSEYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMR---ATEKYDVYSFGVLALEVIKGYHPGDFVS 856 (918)
Q Consensus 780 ~~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~slG~vl~el~tg~~p~~~~~ 856 (918)
|+||+++.++.+||+|||+++.............||+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999988765544445567999999999997765 3778999999999999999999986543
Q ss_pred hhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 857 TIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.. .. ... +.......+. .......+.+++.+||+.||++|||++|+++
T Consensus 245 ~~--~~---~~~---~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 IM--CL---HSK---IKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HH--HH---HHH---HHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HH--HH---HHH---HhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 21 01 011 1111111110 0112246788999999999999999999974
No 88
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6.8e-40 Score=352.42 Aligned_cols=262 Identities=21% Similarity=0.359 Sum_probs=202.1
Q ss_pred HhcCCCCceeeccccceEEEEEEe-----CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc-
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-----PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN- 717 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~- 717 (918)
..++|+..+.||+|+||.||+|++ .+++.||||++... .....+.|.+|++++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 83 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA 83 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 346788999999999999999974 36889999998643 22335679999999999999999999998854
Q ss_pred -CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecc
Q 044366 718 -AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDF 796 (918)
Q Consensus 718 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 796 (918)
....++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Df 158 (295)
T 3ugc_A 84 GRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 158 (295)
T ss_dssp HHTSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCC
T ss_pred CCCceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccC
Confidence 456899999999999999997653 3589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCC---ceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhh-h------hH
Q 044366 797 GFAKFLEPHSSN---WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSIS-N------MI 866 (918)
Q Consensus 797 G~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~-~------~~ 866 (918)
|++......... .....++..|+|||.+.+..++.++||||||+++|||++|..|+........... . ..
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (295)
T 3ugc_A 159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238 (295)
T ss_dssp CSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHH
T ss_pred cccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhH
Confidence 999877543321 2234567789999999999999999999999999999999999765432211100 0 00
Q ss_pred hhhh-hhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 867 IEVN-QILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 867 ~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.... ............. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~el~~~L~ 287 (295)
T 3ugc_A 239 FHLIELLKNNGRLPRPDG---CPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287 (295)
T ss_dssp HHHHHHHHTTCCCCCCTT---CCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHhccCcCCCCcC---cCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 0111 1111111111122 2346888999999999999999999999886
No 89
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.5e-39 Score=354.40 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=194.8
Q ss_pred hcCCCCceeeccccceEEEEEEe----CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCc
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL----PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 720 (918)
.++|...+.||+|+||.||+|+. .+|+.||+|+++.............+.+|+++++.++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999975 47899999999765433333345678899999999999999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
.++||||+++|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 999999999999999997643 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP 880 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (918)
.............||+.|+|||++.+..++.++||||||+++|||++|+.||...... ... ..+.......+
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~-------~~i~~~~~~~p 241 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-KTI-------DKILKCKLNLP 241 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHH-------HHHHHTCCCCC
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-HHH-------HHHHhCCCCCC
Confidence 6554444444567899999999999989999999999999999999999998754321 111 11111111111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARP-----TMKEVCN 914 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RP-----t~~evl~ 914 (918)
.. ....+.+++.+||+.||++|| +++|+++
T Consensus 242 -~~---~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 242 -PY---LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -TT---SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -CC---CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 11 124678899999999999999 7888865
No 90
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=9.9e-40 Score=354.98 Aligned_cols=252 Identities=24% Similarity=0.326 Sum_probs=201.6
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc---cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 367899999999999999999654 799999999865322 2223568899999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.+++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..+.
T Consensus 83 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 83 FLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp EEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 99999999999999754 3489999999999999999999999 99999999999999999999999999998664
Q ss_pred CCC--CCceecccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC
Q 044366 804 PHS--SNWTEFAGTVGYAAPELAYTMRA-TEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP 880 (918)
Q Consensus 804 ~~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (918)
... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+............ ........
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~-------~~~~~~~~ 229 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-------KEKKTYLN 229 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHH-------HTTCTTST
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH-------hcccccCC
Confidence 322 22345678999999999987775 778999999999999999999987543321111110 00111000
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
........+.+++.+||+.||++|||++|+++
T Consensus 230 --~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 230 --PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp --TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --ccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11122356788999999999999999999975
No 91
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.8e-39 Score=347.90 Aligned_cols=258 Identities=25% Similarity=0.360 Sum_probs=199.7
Q ss_pred HhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
..++|...+.||+|+||.||+|... ..+|+|+++... ......+.|.+|++++++++||||+++++++. .+..++
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~l 108 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAI 108 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCC--CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEE
Confidence 3468899999999999999999863 468999887532 12233567999999999999999999999875 455899
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 109 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 109 VTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EEecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 99999999999999754 34589999999999999999999999 99999999999999999999999999998654
Q ss_pred CC--CCCceecccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCC
Q 044366 804 PH--SSNWTEFAGTVGYAAPELAY---TMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLP 878 (918)
Q Consensus 804 ~~--~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (918)
.. ........||+.|+|||++. +..++.++||||||+++|||++|+.||.......... .... .....+...
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-~~~~--~~~~~~~~~ 260 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII-FMVG--RGYASPDLS 260 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH-HHHH--HTCCCCCST
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHH-HHHh--cCCCCcchh
Confidence 32 22234457899999999986 5668899999999999999999999987543321111 1110 111111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 879 TPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 879 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.... .....+.+++.+||+.||++||++.|+++.|+
T Consensus 261 ~~~~---~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 261 KLYK---NCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp TSCS---SSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHH
T ss_pred hhhc---CCcHHHHHHHHHHhhCChhhCcCHHHHHHHHH
Confidence 1111 22356888999999999999999999999875
No 92
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3e-39 Score=350.68 Aligned_cols=262 Identities=20% Similarity=0.328 Sum_probs=192.1
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|.. .+|+.||+|+++... .....+.+.+|+++++.++||||+++++++.+++..++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 80 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS---EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTL 80 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS---TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc---ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEE
Confidence 46789999999999999999965 478999999987542 23345788999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhccc---ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 724 VCEYLARGSLTTILRDDA---AAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
||||++ |+|.+++.... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 156 (317)
T 2pmi_A 81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156 (317)
T ss_dssp EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCE
T ss_pred EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccce
Confidence 999998 59999987542 224589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceecccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhh----------
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELAYTM-RATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEV---------- 869 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~---------- 869 (918)
.............||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .........
T Consensus 157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 235 (317)
T 2pmi_A 157 AFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWPS 235 (317)
T ss_dssp ETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCGG
T ss_pred ecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhhh
Confidence 876554444556789999999998764 58999999999999999999999987543211 111110000
Q ss_pred -hhhc--ccCCC-CCCcchH---------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 870 -NQIL--DHRLP-TPSRDVT---------DKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 870 -~~~~--~~~~~-~~~~~~~---------~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.... ..... ....... .....+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0000 00000 0000011 12246889999999999999999999975
No 93
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.2e-39 Score=346.17 Aligned_cols=253 Identities=23% Similarity=0.387 Sum_probs=205.1
Q ss_pred HhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
..++|...+.||+|+||.||+|+..+++.||+|+++.. ....+++.+|+++++.++||||+++++++.+++..++
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-----SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT-----SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC-----CCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEE
Confidence 45678889999999999999999888889999998753 2345789999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 97 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 97 ITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp EECCCTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred EEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 999999999999997642 3589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 804 PHSS-NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 804 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
.... ......+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... ........... ....
T Consensus 172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~---~~~~ 243 (283)
T 3gen_A 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETAEHIAQGLR---LYRP 243 (283)
T ss_dssp CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHTTCC---CCCC
T ss_pred ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----HHHHHHhcccC---CCCC
Confidence 3211 1223346788999999998899999999999999999998 99998654321 11111111111 1111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
... ...+.+++.+||+.||++|||++|+++.|.
T Consensus 244 ~~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 244 HLA---SEKVYTIMYSCWHEKADERPTFKILLSNIL 276 (283)
T ss_dssp TTC---CHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CcC---CHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 111 246788999999999999999999999885
No 94
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=9.8e-40 Score=356.72 Aligned_cols=253 Identities=23% Similarity=0.320 Sum_probs=205.8
Q ss_pred HHHhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCC
Q 044366 642 TKATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQ 719 (918)
Q Consensus 642 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 719 (918)
....++|...+.||+|+||.||+|+.. +|+.||||+++...... ....+.+..|..+++.+ +||||+++++++.+.+
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~ 91 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 91 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh-hhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence 445688999999999999999999664 68999999997643221 23456788999999887 8999999999999999
Q ss_pred ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccc
Q 044366 720 HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFA 799 (918)
Q Consensus 720 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~ 799 (918)
..++||||+++|+|.+++... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 92 ~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 92 NLFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 999999999999999999764 3489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCC
Q 044366 800 KFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPT 879 (918)
Q Consensus 800 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (918)
+.............||+.|+|||++.+..++.++||||+||++|||++|+.||...... . .. ..+.......
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~----~~---~~i~~~~~~~ 237 (345)
T 1xjd_A 166 KENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-E----LF---HSIRMDNPFY 237 (345)
T ss_dssp BCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-H----HH---HHHHHCCCCC
T ss_pred hhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH-H----HH---HHHHhCCCCC
Confidence 87554444455678999999999999999999999999999999999999998654321 1 11 1111111111
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 044366 880 PSRDVTDKLRSIMEVAILCLVENPEARPTMK-EVC 913 (918)
Q Consensus 880 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~-evl 913 (918)
+.. ....+.+++.+||+.||++||++. |++
T Consensus 238 -p~~---~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 238 -PRW---LEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -CTT---SCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -Ccc---cCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 111 224678899999999999999987 554
No 95
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-39 Score=359.16 Aligned_cols=252 Identities=18% Similarity=0.292 Sum_probs=205.6
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|.+.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+++++.++||||+++++++.+++..++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 46799999999999999999965 478999999986531 1224578999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC--CCcEEEeccccccc
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS--EYEAHVSDFGFAKF 801 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~DfG~~~~ 801 (918)
||||+++|+|.+++... ...+++.+++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 126 v~E~~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~ 200 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATK 200 (387)
T ss_dssp EEECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred EEEcCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEeccccee
Confidence 99999999999999754 23589999999999999999999999 9999999999999974 46799999999988
Q ss_pred cCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 802 LEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 802 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+....+....
T Consensus 201 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~-------~i~~~~~~~~~ 271 (387)
T 1kob_A 201 LNPDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQ-------NVKRCDWEFDE 271 (387)
T ss_dssp CCTTS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHH-------HHHHCCCCCCS
T ss_pred cCCCc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHH-------HHHhCCCCCCc
Confidence 76433 334557999999999999989999999999999999999999998754321 1111 11111111111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.........+.+++.+||+.||++|||+.|+++
T Consensus 272 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 111223356889999999999999999999986
No 96
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=5.7e-40 Score=363.77 Aligned_cols=265 Identities=21% Similarity=0.310 Sum_probs=209.5
Q ss_pred CHHHHHHHhcCCCCceeeccccceEEEEEEe------CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCcee
Q 044366 637 LYEEITKATGNFGEKYCIGKGGQRSVYKAEL------PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNII 709 (918)
Q Consensus 637 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv 709 (918)
.....+...++|...+.||+|+||.||+|++ .+++.||||+++... .....+.+.+|+++++++ +||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC---CHHHHHHHHHHHHHHHhhcCCccee
Confidence 3455666778999999999999999999963 356899999986531 222246799999999999 799999
Q ss_pred eEecccccCC-ceEEEEEeccCCChhHHhhcccc----------------------------------------------
Q 044366 710 KFHGFCSNAQ-HSFIVCEYLARGSLTTILRDDAA---------------------------------------------- 742 (918)
Q Consensus 710 ~~~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------- 742 (918)
++++++.+.+ ..++||||+++|+|.++++....
T Consensus 90 ~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (359)
T 3vhe_A 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE 169 (359)
T ss_dssp CEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred eeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence 9999987654 58999999999999999976532
Q ss_pred -----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCCC
Q 044366 743 -----------------AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEPH 805 (918)
Q Consensus 743 -----------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~~ 805 (918)
...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 246 (359)
T 3vhe_A 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246 (359)
T ss_dssp --------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence 11289999999999999999999999 9999999999999999999999999999876443
Q ss_pred CC--CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCc
Q 044366 806 SS--NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSR 882 (918)
Q Consensus 806 ~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (918)
.. ......||+.|+|||++.+..++.++||||||+++|||++ |+.||......... . ..... ........
T Consensus 247 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~---~~~~~---~~~~~~~~ 319 (359)
T 3vhe_A 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-C---RRLKE---GTRMRAPD 319 (359)
T ss_dssp TTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH-H---HHHHH---TCCCCCCT
T ss_pred ccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHH-H---HHHHc---CCCCCCCC
Confidence 32 2234567899999999999999999999999999999998 99998654321111 1 11111 11111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 883 DVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 883 ~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 320 ~---~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 320 Y---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp T---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C---CCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 1 2245788999999999999999999999986
No 97
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.5e-39 Score=353.91 Aligned_cols=250 Identities=25% Similarity=0.355 Sum_probs=182.8
Q ss_pred ceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc-CCceeeEecccccCCceEEEEEec
Q 044366 651 KYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVCEYL 728 (918)
Q Consensus 651 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~ 728 (918)
.+.||+|+||.||+|.. .+|+.||||++... ....+.+|+.+++.++ ||||+++++++.+++..++||||+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 88 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELL 88 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEcc
Confidence 46799999999999965 47899999998642 2467889999999997 999999999999999999999999
Q ss_pred cCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC---cEEEeccccccccCCC
Q 044366 729 ARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY---EAHVSDFGFAKFLEPH 805 (918)
Q Consensus 729 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~DfG~~~~~~~~ 805 (918)
++|+|.+++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.....
T Consensus 89 ~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 89 NGGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CSCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 999999999864 3489999999999999999999999 999999999999998765 7999999999877665
Q ss_pred CCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcchH
Q 044366 806 SSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDVT 885 (918)
Q Consensus 806 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (918)
........||+.|+|||++.+..++.++||||+|+++|||++|+.||......... .........+.............
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~ 241 (325)
T 3kn6_A 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC-TSAVEIMKKIKKGDFSFEGEAWK 241 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C-CCHHHHHHHHTTTCCCCCSHHHH
T ss_pred CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc-ccHHHHHHHHHcCCCCCCccccc
Confidence 55555667899999999999999999999999999999999999998754321110 01111122222333322222223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 886 DKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 886 ~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.....+.+++.+||+.||++|||++|+++
T Consensus 242 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp TSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 34567889999999999999999998863
No 98
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=357.95 Aligned_cols=260 Identities=23% Similarity=0.403 Sum_probs=209.0
Q ss_pred HHHHhcCCCCceeeccccceEEEEEEeC------CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecc
Q 044366 641 ITKATGNFGEKYCIGKGGQRSVYKAELP------SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGF 714 (918)
Q Consensus 641 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~ 714 (918)
+....++|...+.||+|+||.||+|+.. +++.||||+++... .....+.|.+|+++++.++||||++++++
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~ 118 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGV 118 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 3445678999999999999999999663 35889999987532 22235679999999999999999999999
Q ss_pred cccCCceEEEEEeccCCChhHHhhcccc---------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 044366 715 CSNAQHSFIVCEYLARGSLTTILRDDAA---------------------AKEFSWNQRMNVIKGVANALSYLHHDCIPPI 773 (918)
Q Consensus 715 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 773 (918)
+.+++..++||||+++|+|.+++..... ...+++.+++.++.||++||+|||+. +|
T Consensus 119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~i 195 (343)
T 1luf_A 119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KF 195 (343)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred EccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 9999999999999999999999976421 25689999999999999999999999 99
Q ss_pred EEcCCCCCCeeeCCCCcEEEeccccccccCCCCC--CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCC
Q 044366 774 VHRDISSKNVLLDSEYEAHVSDFGFAKFLEPHSS--NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYH 850 (918)
Q Consensus 774 vH~dlk~~Nill~~~~~~kl~DfG~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~ 850 (918)
+||||||+||+++.++.+||+|||++........ ......+++.|+|||++.+..++.++||||||+++|||++ |..
T Consensus 196 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 275 (343)
T 1luf_A 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 275 (343)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999987643321 2234567899999999999899999999999999999999 999
Q ss_pred CCCcchhhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 851 PGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 851 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
||...... .. . ..+.....+...... ...+.+++.+||+.||++|||+.++++.|+
T Consensus 276 p~~~~~~~--~~---~---~~~~~~~~~~~~~~~---~~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 276 PYYGMAHE--EV---I---YYVRDGNILACPENC---PLELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp TTTTSCHH--HH---H---HHHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCCCChH--HH---H---HHHhCCCcCCCCCCC---CHHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 98644321 11 1 111112222222222 246888999999999999999999999986
No 99
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=359.78 Aligned_cols=257 Identities=24% Similarity=0.362 Sum_probs=207.5
Q ss_pred HhcCCCCceeeccccceEEEEEEe--------CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecc
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL--------PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGF 714 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 714 (918)
..++|...+.||+|+||.||+|+. ..++.||||+++... .....+.+.+|+++++.+ +||||++++++
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~ 143 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGA 143 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc---CHHHHHHHHHHHHHHHHhcCCchhhhheee
Confidence 346888999999999999999964 233579999986531 222346799999999999 99999999999
Q ss_pred cccCCceEEEEEeccCCChhHHhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCC
Q 044366 715 CSNAQHSFIVCEYLARGSLTTILRDDAA-------------AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSK 781 (918)
Q Consensus 715 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 781 (918)
+.+++..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+. +|+||||||+
T Consensus 144 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~ 220 (382)
T 3tt0_A 144 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 220 (382)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGG
T ss_pred eccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcc
Confidence 9999999999999999999999986532 24589999999999999999999999 9999999999
Q ss_pred CeeeCCCCcEEEeccccccccCCCCC--CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhh
Q 044366 782 NVLLDSEYEAHVSDFGFAKFLEPHSS--NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTI 858 (918)
Q Consensus 782 Nill~~~~~~kl~DfG~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~ 858 (918)
||+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 221 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~ 300 (382)
T 3tt0_A 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 300 (382)
T ss_dssp GEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred eEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999987654332 2233456889999999999999999999999999999999 99998644321
Q ss_pred hhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 859 FSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
........ .......... ...+.+++.+||+.||++|||++|+++.|+
T Consensus 301 -----~~~~~~~~---~~~~~~~~~~---~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 348 (382)
T 3tt0_A 301 -----ELFKLLKE---GHRMDKPSNC---TNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348 (382)
T ss_dssp -----HHHHHHHT---TCCCCCCSSC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----HHHHHHHc---CCCCCCCccC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111 1111111222 246788999999999999999999999886
No 100
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=9.7e-40 Score=357.01 Aligned_cols=256 Identities=16% Similarity=0.188 Sum_probs=204.2
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCCceE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 722 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+++++.+ +||||+++++++..++..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 81 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS------RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA 81 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC------SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc------chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence 36789999999999999999964 689999999986431 134688999999999 9999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCc-----EEEeccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYE-----AHVSDFG 797 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~DfG 797 (918)
+||||+ +++|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred EEEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 999999 89999999864 34589999999999999999999999 9999999999999999887 9999999
Q ss_pred cccccCCCCCC-------ceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhh
Q 044366 798 FAKFLEPHSSN-------WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVN 870 (918)
Q Consensus 798 ~~~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~ 870 (918)
+++.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........
T Consensus 156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~~~~~~~~-- 231 (330)
T 2izr_A 156 LAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--TLKERYQK-- 231 (330)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--SHHHHHHH--
T ss_pred cceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc--cHHHHHHH--
Confidence 99876543321 23567999999999999999999999999999999999999998754211 00110111
Q ss_pred hhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 871 QILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
+.....+.+..........+.+++..||+.||.+||+++++.+.|+
T Consensus 232 -i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 232 -IGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp -HHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred -HHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 1000000000000001127889999999999999999999999875
No 101
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.7e-40 Score=366.74 Aligned_cols=260 Identities=18% Similarity=0.258 Sum_probs=207.2
Q ss_pred HHHHHHhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc
Q 044366 639 EEITKATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN 717 (918)
Q Consensus 639 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 717 (918)
.++....++|...+.||+|+||.||+|+.. +++.||+|+++...... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~-~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh-hHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 344556688999999999999999999664 68999999987632222 2224568899999999999999999999999
Q ss_pred CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccc
Q 044366 718 AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFG 797 (918)
Q Consensus 718 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 797 (918)
++..++||||+++|+|.++++.. .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccc
Confidence 99999999999999999999753 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCC-CceecccccccccccccccCC----CCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhh
Q 044366 798 FAKFLEPHSS-NWTEFAGTVGYAAPELAYTMR----ATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQI 872 (918)
Q Consensus 798 ~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 872 (918)
+++....... .....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... ............
T Consensus 214 ~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-~~~~~i~~~~~~- 291 (410)
T 3v8s_A 214 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKIMNHKNS- 291 (410)
T ss_dssp TCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHHH-
T ss_pred eeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-hHHHHHHhcccc-
Confidence 9987654432 223567999999999998665 788999999999999999999998654321 111111110001
Q ss_pred cccCCCCCCcchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 044366 873 LDHRLPTPSRDVTDKLRSIMEVAILCLVENPEA--RPTMKEVCN 914 (918)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--RPt~~evl~ 914 (918)
...+.. .. ....+.+++.+|++.+|++ ||+++|+++
T Consensus 292 --~~~p~~-~~---~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 292 --LTFPDD-ND---ISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp --CCCCTT-CC---CCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred --ccCCCc-cc---ccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 111111 11 1245788899999999998 999999975
No 102
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.1e-39 Score=369.60 Aligned_cols=255 Identities=23% Similarity=0.422 Sum_probs=207.7
Q ss_pred HHhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
...++|...+.||+|+||.||+|...+++.||||+++.. ....++|.+|+.+++.++||||+++++++. .+..+
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~ 258 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-----SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIY 258 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT-----SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC-----CccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccE
Confidence 345678889999999999999999888899999998752 234789999999999999999999999986 56789
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+||||+++|+|.++++... ...+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 259 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp EEECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred EEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 9999999999999997643 23478999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC-CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC
Q 044366 803 EPHSS-NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP 880 (918)
Q Consensus 803 ~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (918)
..... ......++..|+|||++.+..++.++|||||||++|||++ |+.||...... .+. ..+.. ..+.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~---~~i~~--~~~~~~~ 407 (454)
T 1qcf_A 335 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVI---RALER--GYRMPRP 407 (454)
T ss_dssp CCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHH---HHHHH--TCCCCCC
T ss_pred CCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHH---HHHHc--CCCCCCC
Confidence 53211 1123346788999999998899999999999999999999 99998654321 111 11111 1112211
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
.. ....+.+++.+||+.||++|||+++|++.|+.
T Consensus 408 -~~---~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~ 441 (454)
T 1qcf_A 408 -EN---CPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 441 (454)
T ss_dssp -TT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -CC---CCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 12 23468889999999999999999999999863
No 103
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.2e-39 Score=354.42 Aligned_cols=252 Identities=23% Similarity=0.348 Sum_probs=203.9
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
++|.+.+.||+|+||.||+|.. .+|+.||+|++...... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV-ERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcc-cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 6789999999999999999965 46899999998764322 233467899999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
|||+++|+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++..+..
T Consensus 94 ~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp ECCCTTEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 9999999999999764 3489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeccccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 805 HSSNWTEFAGTVGYAAPELAYT---MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 805 ~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
. .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ....... +...... .+
T Consensus 168 ~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~~---~~~~~~~-~p 240 (384)
T 4fr4_A 168 E-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVHT---FETTVVT-YP 240 (384)
T ss_dssp T-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHHH---HHHCCCC-CC
T ss_pred C-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHHH---HhhcccC-CC
Confidence 3 33455689999999999864 458899999999999999999999986432211 1111111 1111111 11
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPT-MKEVCN 914 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt-~~evl~ 914 (918)
.. ....+.+++.+||+.||++||+ ++++.+
T Consensus 241 ~~---~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 241 SA---WSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp TT---SCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred Cc---CCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 11 2246788999999999999998 676653
No 104
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-39 Score=356.39 Aligned_cols=259 Identities=22% Similarity=0.330 Sum_probs=206.2
Q ss_pred HHhcCCCCceeeccccceEEEEEEe------CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEeccc
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAEL------PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFC 715 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 715 (918)
...++|...+.||+|+||.||+|.. .+++.||||+++... .....+.+.+|+.+++++ +||||+++++++
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 118 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSEREALMSELKMMTQLGSHENIVNLLGAC 118 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 3557899999999999999999974 245689999987532 233457899999999999 899999999999
Q ss_pred ccCCceEEEEEeccCCChhHHhhccccc--------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Q 044366 716 SNAQHSFIVCEYLARGSLTTILRDDAAA--------------------KEFSWNQRMNVIKGVANALSYLHHDCIPPIVH 775 (918)
Q Consensus 716 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 775 (918)
..++..++||||+++|+|.+++...... ..+++.+++.++.|++.||+|||+. +|+|
T Consensus 119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH 195 (344)
T 1rjb_A 119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVH 195 (344)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence 9999999999999999999999765321 3479999999999999999999999 9999
Q ss_pred cCCCCCCeeeCCCCcEEEeccccccccCCCCCC--ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCC
Q 044366 776 RDISSKNVLLDSEYEAHVSDFGFAKFLEPHSSN--WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPG 852 (918)
Q Consensus 776 ~dlk~~Nill~~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~ 852 (918)
|||||+||+++.++.+||+|||++......... .....||+.|+|||++.+..++.++||||||+++|||++ |..||
T Consensus 196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 275 (344)
T 1rjb_A 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275 (344)
T ss_dssp TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred CCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999999876544332 223456889999999999899999999999999999998 99998
Q ss_pred CcchhhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 853 DFVSTIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
........ .. ....... ....... ....+.+++.+||+.||.+|||+.|+++.|+
T Consensus 276 ~~~~~~~~-~~---~~~~~~~---~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 276 PGIPVDAN-FY---KLIQNGF---KMDQPFY---ATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp TTCCCSHH-HH---HHHHTTC---CCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccCCcHHH-HH---HHHhcCC---CCCCCCC---CCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 65432111 11 1111111 1111111 2346888999999999999999999999885
No 105
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=355.42 Aligned_cols=251 Identities=22% Similarity=0.328 Sum_probs=190.0
Q ss_pred HhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
..++|...+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++.+++..+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 124 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEIS 124 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEE
Confidence 4577999999999999999999664 68899999987531 2456889999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC---CCcEEEeccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS---EYEAHVSDFGFA 799 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~DfG~~ 799 (918)
+||||+++|+|.+++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 125 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a 198 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLS 198 (349)
T ss_dssp EEECCCCSCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred EEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccc
Confidence 999999999999999764 3489999999999999999999999 9999999999999975 789999999999
Q ss_pred cccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCC
Q 044366 800 KFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPT 879 (918)
Q Consensus 800 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (918)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ..+.......
T Consensus 199 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-------~~i~~~~~~~ 270 (349)
T 2w4o_A 199 KIVEHQV-LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF-------RRILNCEYYF 270 (349)
T ss_dssp ---------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHH-------HHHHTTCCCC
T ss_pred cccCccc-ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHH-------HHHHhCCCcc
Confidence 8765432 2344678999999999999899999999999999999999999986443221111 1111111111
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 880 PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 880 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
...........+.+++.+||+.||++|||+.|+++
T Consensus 271 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 271 ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111223356889999999999999999999986
No 106
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=8.2e-39 Score=346.01 Aligned_cols=248 Identities=27% Similarity=0.407 Sum_probs=205.3
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|+. .+|+.||+|+++..... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 36788999999999999999965 47999999999764322 22346788999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 v~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp EECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 99999999999999764 3489999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcc
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRD 883 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (918)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. ...+.......+ ..
T Consensus 158 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~-------~~~i~~~~~~~p-~~ 225 (318)
T 1fot_A 158 DV---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-KT-------YEKILNAELRFP-PF 225 (318)
T ss_dssp SC---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HH-------HHHHHHCCCCCC-TT
T ss_pred Cc---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-HH-------HHHHHhCCCCCC-CC
Confidence 32 23457899999999999999999999999999999999999998654321 11 111112222111 11
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 044366 884 VTDKLRSIMEVAILCLVENPEARP-----TMKEVCN 914 (918)
Q Consensus 884 ~~~~~~~l~~li~~cl~~dp~~RP-----t~~evl~ 914 (918)
....+.+++.+|++.||++|| +++|+++
T Consensus 226 ---~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 226 ---FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ---SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ---CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 124678899999999999999 8888874
No 107
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=359.00 Aligned_cols=256 Identities=25% Similarity=0.375 Sum_probs=204.6
Q ss_pred hcCCCCceeeccccceEEEEEEeC------CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccC
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP------SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNA 718 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 718 (918)
.++|...+.||+|+||.||+|.+. +++.||||+++... .......+.+|+.++++++||||+++++++.++
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc---ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 367888999999999999999742 46789999986421 222345789999999999999999999999999
Q ss_pred CceEEEEEeccCCChhHHhhccc----ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC---cE
Q 044366 719 QHSFIVCEYLARGSLTTILRDDA----AAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY---EA 791 (918)
Q Consensus 719 ~~~~lv~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~ 791 (918)
+..++||||+++|+|.++++... ....+++.+++.++.||++||+|||+. +|+||||||+||+++.++ .+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceE
Confidence 99999999999999999997653 124589999999999999999999999 999999999999999555 59
Q ss_pred EEeccccccccCCCC--CCceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhh
Q 044366 792 HVSDFGFAKFLEPHS--SNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIE 868 (918)
Q Consensus 792 kl~DfG~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~ 868 (918)
||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-----~~~~- 297 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLE- 297 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHH-
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH-
Confidence 999999998653221 22234567899999999999999999999999999999998 99998654321 1111
Q ss_pred hhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 869 VNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.+............ ...+.+++.+||+.||++|||++|+++.|+
T Consensus 298 --~i~~~~~~~~~~~~---~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 298 --FVTSGGRMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp --HHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --HHHcCCCCCCCccC---CHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 11111111111222 245788999999999999999999999885
No 108
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.1e-39 Score=353.95 Aligned_cols=253 Identities=22% Similarity=0.318 Sum_probs=206.4
Q ss_pred HHhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCCc
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 720 (918)
...++|...+.||+|+||.||+|+.. +|+.||+|+++...... ....+.+..|..++..+ +||+|+++++++.+.+.
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~-~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~ 95 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ-DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 95 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHH-TTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhc-chHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence 34578999999999999999999665 58899999997643222 23467789999999888 89999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
.++||||+++|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 96 LYFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 999999999999999997643 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP 880 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (918)
.............||+.|+|||++.+..++.++|||||||++|||++|+.||...... .. ...+.......+
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~---~~~i~~~~~~~p 241 (353)
T 2i0e_A 170 ENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----EL---FQSIMEHNVAYP 241 (353)
T ss_dssp CCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HH---HHHHHHCCCCCC
T ss_pred ccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH-----HH---HHHHHhCCCCCC
Confidence 7554444455678999999999999999999999999999999999999998654321 11 111112222211
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARPT-----MKEVCN 914 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RPt-----~~evl~ 914 (918)
.. ....+.+++.+||+.||++||+ ++|+++
T Consensus 242 -~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 242 -KS---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp -TT---SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred -CC---CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 11 2346788999999999999995 566653
No 109
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3e-39 Score=355.89 Aligned_cols=263 Identities=23% Similarity=0.239 Sum_probs=205.3
Q ss_pred HHHHhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccC-CCCChHHHHHHHHHHhhccCCceeeEecccccC
Q 044366 641 ITKATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSD-ETANPSEFLNEVLALTEIRHRNIIKFHGFCSNA 718 (918)
Q Consensus 641 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 718 (918)
+....++|...+.||+|+||.||+|.. .+++.||+|++....... .....+.+.+|+++++.++||||+++++++.++
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 346678899999999999999999955 578999999987643221 233467899999999999999999999999999
Q ss_pred CceEEEEEeccCCChhHHhhcccc-------------------------------------cCCCCHHHHHHHHHHHHHH
Q 044366 719 QHSFIVCEYLARGSLTTILRDDAA-------------------------------------AKEFSWNQRMNVIKGVANA 761 (918)
Q Consensus 719 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------~~~l~~~~~~~i~~~i~~~ 761 (918)
+..++||||+++|+|.+++..... ...+++..++.++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999999863110 1124677889999999999
Q ss_pred HHHHHhCCCCCeEEcCCCCCCeeeCCCC--cEEEeccccccccCCCCC----Cceeccccccccccccccc--CCCCccc
Q 044366 762 LSYLHHDCIPPIVHRDISSKNVLLDSEY--EAHVSDFGFAKFLEPHSS----NWTEFAGTVGYAAPELAYT--MRATEKY 833 (918)
Q Consensus 762 l~~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~DfG~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~--~~~~~~~ 833 (918)
|+|||+. +|+||||||+||+++.++ .+||+|||++..+..... ......||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 899999999987643221 2345678999999999875 6788999
Q ss_pred chhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 044366 834 DVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVC 913 (918)
Q Consensus 834 Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl 913 (918)
||||||+++|||++|+.||....... . ...+..................+.+++.+||+.||.+|||+.|++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDAD-T-------ISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHH-H-------HHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHH-H-------HHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 99999999999999999986543321 1 111112222222222222345688999999999999999999998
Q ss_pred H
Q 044366 914 N 914 (918)
Q Consensus 914 ~ 914 (918)
+
T Consensus 330 ~ 330 (345)
T 3hko_A 330 Q 330 (345)
T ss_dssp H
T ss_pred c
Confidence 6
No 110
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=344.27 Aligned_cols=252 Identities=24% Similarity=0.375 Sum_probs=185.3
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|.+.+.||+|+||.||+|.. .+|+.||||++....... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhh-hhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 46789999999999999999965 579999999986543222 2335789999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++++|.+++... ...+++.+++.++.|+++||+|||+. +++||||||+||+++.++.+||+|||.+....
T Consensus 89 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 99999999999999764 24589999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcc
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRD 883 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (918)
..........|++.|+|||.+.+..++.++||||+|+++|||++|+.||...... .. ...........+ ..
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~---~~~~~~~~~~~~-~~ 234 (278)
T 3cok_A 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK-----NT---LNKVVLADYEMP-SF 234 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCSSCCCCC-TT
T ss_pred CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH-----HH---HHHHhhcccCCc-cc
Confidence 4444444567899999999999888999999999999999999999998643211 00 011111111111 11
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 884 VTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 884 ~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
....+.+++.+||+.||++|||++|+++
T Consensus 235 ---~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 235 ---LSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 2246788999999999999999999975
No 111
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=357.94 Aligned_cols=247 Identities=22% Similarity=0.295 Sum_probs=197.1
Q ss_pred CceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEEEEec
Q 044366 650 EKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVCEYL 728 (918)
Q Consensus 650 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 728 (918)
..+.||+|+||.||+|.. .+|+.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 356799999999999965 579999999987532 123568999999999999999999999999999999999999
Q ss_pred cCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeee--CCCCcEEEeccccccccCCCC
Q 044366 729 ARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLL--DSEYEAHVSDFGFAKFLEPHS 806 (918)
Q Consensus 729 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill--~~~~~~kl~DfG~~~~~~~~~ 806 (918)
++|+|.+++... ...+++.+++.++.||++||+|||+. +|+||||||+||++ +.++.+||+|||+++.+.+..
T Consensus 169 ~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 169 DGGELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp TTCEEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 999999988754 23589999999999999999999999 99999999999999 667899999999998876433
Q ss_pred CCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcchHH
Q 044366 807 SNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDVTD 886 (918)
Q Consensus 807 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 886 (918)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .. ...+....+.........
T Consensus 244 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~-------~~~i~~~~~~~~~~~~~~ 314 (373)
T 2x4f_A 244 K-LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ET-------LNNILACRWDLEDEEFQD 314 (373)
T ss_dssp B-CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HH-------HHHHHHTCCCSCSGGGTT
T ss_pred c-cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HH-------HHHHHhccCCCChhhhcc
Confidence 2 33457899999999999889999999999999999999999998654321 11 111122222222222223
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 887 KLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 887 ~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
....+.+++.+||+.||.+|||++|+++
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 3457889999999999999999999986
No 112
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=7.2e-39 Score=348.64 Aligned_cols=255 Identities=21% Similarity=0.286 Sum_probs=207.1
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCC--CCChHHHHHHHHHHhhccCCceeeEecccccCCce
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDE--TANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 721 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 721 (918)
.++|.+.+.||+|+||.||+|.. .+|+.||||++........ ....+.+.+|+.+++.++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 46788999999999999999965 4799999999876433221 12367899999999999999999999999999999
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC----cEEEeccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY----EAHVSDFG 797 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~DfG 797 (918)
++||||+++++|.+++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 9999999999999999764 3489999999999999999999999 999999999999999887 79999999
Q ss_pred cccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
++....... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||...... ... ..+.....
T Consensus 165 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~-------~~i~~~~~ 235 (321)
T 2a2a_A 165 LAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETL-------ANITSVSY 235 (321)
T ss_dssp TCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHH-------HHHHTTCC
T ss_pred cceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-HHH-------HHHHhccc
Confidence 998775432 234457899999999999989999999999999999999999998654321 111 11111111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..+..........+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1111001122356889999999999999999999986
No 113
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.5e-39 Score=353.92 Aligned_cols=252 Identities=23% Similarity=0.303 Sum_probs=201.6
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCCce
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 721 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 721 (918)
..++|...+.||+|+||.||+|.. .+|+.||||++.... ..+.+|++++.++ +||||+++++++.+++..
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~--------~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~ 91 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK--------RDPTEEIEILLRYGQHPNIITLKDVYDDGKYV 91 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT--------CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc--------CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEE
Confidence 356799999999999999999965 478999999986531 1235788888888 799999999999999999
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCC----CcEEEeccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSE----YEAHVSDFG 797 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~DfG 797 (918)
++||||+++|+|.+++... ..+++.+++.++.||+.||+|||+. +|+||||||+||++.++ +.+||+|||
T Consensus 92 ~lv~E~~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EEEECCCCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 9999999999999999764 3489999999999999999999999 99999999999998543 359999999
Q ss_pred cccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
++..............||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...... ..+.....
T Consensus 166 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~~---~~i~~~~~ 240 (342)
T 2qr7_A 166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEIL---ARIGSGKF 240 (342)
T ss_dssp TCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--CHHHHH---HHHHHCCC
T ss_pred CcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--CHHHHH---HHHccCCc
Confidence 9998766555555667899999999998888999999999999999999999998643211 011111 11111222
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.............+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 241 SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2111111223356888999999999999999999875
No 114
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.1e-38 Score=341.43 Aligned_cols=256 Identities=29% Similarity=0.421 Sum_probs=201.6
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCC---CChHHHHHHHHHHhhccCCceeeEecccccCCc
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDET---ANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 720 (918)
.++|...+.||+|+||.||+|+. .+++.||+|++......... ...+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46889999999999999999965 57999999998653222111 11267999999999999999999999987655
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEcCCCCCCeeeCCCCc-----EEE
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPP--IVHRDISSKNVLLDSEYE-----AHV 793 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~-----~kl 793 (918)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 7999999999999988754 34589999999999999999999999 8 999999999999988776 999
Q ss_pred eccccccccCCCCCCceecccccccccccccc--cCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhh
Q 044366 794 SDFGFAKFLEPHSSNWTEFAGTVGYAAPELAY--TMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQ 871 (918)
Q Consensus 794 ~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 871 (918)
+|||+++.... ......|++.|+|||++. ...++.++||||+|+++|||++|+.||.............. ...
T Consensus 171 ~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~--~~~ 245 (287)
T 4f0f_A 171 ADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI--REE 245 (287)
T ss_dssp CCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH--HHS
T ss_pred CCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH--hcc
Confidence 99999985433 334567899999999984 45578899999999999999999999864432111101000 001
Q ss_pred hcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 872 ILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
...+..... ....+.+++.+||+.||++|||++|+++.|++
T Consensus 246 ---~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 246 ---GLRPTIPED---CPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp ---CCCCCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ---CCCCCCCcc---cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 111111111 23468889999999999999999999999874
No 115
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7e-39 Score=351.29 Aligned_cols=247 Identities=23% Similarity=0.306 Sum_probs=205.3
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
++|...+.||+|+||.||+|+. .+|+.||+|++...... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhc-cHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 6788999999999999999965 47999999998764322 223467899999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
|||+++|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999998643 489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcch
Q 044366 805 HSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDV 884 (918)
Q Consensus 805 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 884 (918)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .. ...+.......+ ..
T Consensus 194 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~-------~~~i~~~~~~~p-~~- 260 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QI-------YEKIVSGKVRFP-SH- 260 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HH-------HHHHHHCCCCCC-TT-
T ss_pred C---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH-HH-------HHHHHcCCCCCC-CC-
Confidence 3 23457899999999999999999999999999999999999998654321 11 111111222111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 044366 885 TDKLRSIMEVAILCLVENPEARPT-----MKEVCN 914 (918)
Q Consensus 885 ~~~~~~l~~li~~cl~~dp~~RPt-----~~evl~ 914 (918)
....+.+++.+||+.||++||+ ++|+++
T Consensus 261 --~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 261 --FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 2246788999999999999998 888764
No 116
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.6e-37 Score=356.14 Aligned_cols=345 Identities=29% Similarity=0.425 Sum_probs=154.1
Q ss_pred CCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEE
Q 044366 20 LSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLY 99 (918)
Q Consensus 20 l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~ 99 (918)
+++|+.|+++++.++ .+| .+..+++|++|+|++|++++ +|. +..+++|++|++++|.+++..| +.++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCC-chh-hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 445555555555554 333 25555555555555555552 222 4455555555555554443222 44444455555
Q ss_pred ccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCC
Q 044366 100 LNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSG 179 (918)
Q Consensus 100 L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 179 (918)
+++|++.+..+ +..+++|++|++++|.+++. + .+.++++|++|+++ |.+.+.. .+..+++|++|++++|.+++
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCC
Confidence 54444443221 44444444444444444421 1 24444444444443 2222221 14444444444444444443
Q ss_pred cCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccc
Q 044366 180 LIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGY 259 (918)
Q Consensus 180 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 259 (918)
+ ..+..+++|++|++++|.+++..+ +..+++|+.|++++|++++. ..+..
T Consensus 192 ~--------------------------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~ 241 (466)
T 1o6v_A 192 I--------------------------SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLAS 241 (466)
T ss_dssp C--------------------------GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGG
T ss_pred C--------------------------hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhc
Confidence 2 224444444444444444443322 33444444444444444432 23444
Q ss_pred cCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEe
Q 044366 260 LKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLD 339 (918)
Q Consensus 260 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 339 (918)
+++|+.|++++|.+.+..+ +..+++|+.|++++|++.+..+ +..+++|++|++++|.+..+.+ +..+++|+.|+
T Consensus 242 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 242 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 4444444444444443332 4444444444444444443222 4444444444444444444332 34444444444
Q ss_pred CCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchhhccccCceecccccccC
Q 044366 340 LSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFG 419 (918)
Q Consensus 340 Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 419 (918)
+++|+++.. .| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++
T Consensus 316 L~~n~l~~~------------------------~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~ 367 (466)
T 1o6v_A 316 LYFNNISDI------------------------SP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISD 367 (466)
T ss_dssp CCSSCCSCC------------------------GG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCB
T ss_pred CcCCcCCCc------------------------hh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCc
Confidence 444444322 11 33344444444444444432 234444445555555554444
Q ss_pred CCCCCCCCCCcccEEeccCccccc
Q 044366 420 GVPLEFGTLTELQYLDLSANKLSS 443 (918)
Q Consensus 420 ~~~~~~~~l~~L~~L~Ls~N~l~~ 443 (918)
..| +..+++|++|++++|.+++
T Consensus 368 ~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 368 LTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CGG--GTTCTTCCEEECCCEEEEC
T ss_pred cch--hhcCCCCCEEeccCCcccC
Confidence 443 4445555555555555553
No 117
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.8e-39 Score=362.18 Aligned_cols=264 Identities=20% Similarity=0.253 Sum_probs=209.2
Q ss_pred HHHHHHHhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccc
Q 044366 638 YEEITKATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCS 716 (918)
Q Consensus 638 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 716 (918)
+.+.....++|...++||+|+||.||+|+.. +++.||+|+++...... ....+.+.+|..+++.++||||+++++++.
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK-RAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH-TTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 3455556789999999999999999999765 58899999987632222 222455899999999999999999999999
Q ss_pred cCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecc
Q 044366 717 NAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDF 796 (918)
Q Consensus 717 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 796 (918)
+++..++||||+++|+|.+++... ...+++..++.++.||+.||+|||+. +||||||||+||+++.++.+||+||
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 999999999999999999999763 24589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCC-ceecccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhh
Q 044366 797 GFAKFLEPHSSN-WTEFAGTVGYAAPELAY-----TMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVN 870 (918)
Q Consensus 797 G~~~~~~~~~~~-~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~ 870 (918)
|+++........ ....+||+.|+|||++. ...++.++|||||||++|||++|+.||...... ...........
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~ 298 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYGKIMNHKE 298 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHH
T ss_pred hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh-HHHHhhhhccc
Confidence 999876544332 23467999999999987 456899999999999999999999998754321 11111111101
Q ss_pred hhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 044366 871 QILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEA--RPTMKEVCN 914 (918)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--RPt~~evl~ 914 (918)
....+..... ....+.+++.+|+..+|++ ||+++|+++
T Consensus 299 ---~~~~p~~~~~---~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 299 ---RFQFPTQVTD---VSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp ---HCCCCSSCCC---SCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ---cccCCccccc---CCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1112221111 2245778899999888888 999999875
No 118
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5.2e-39 Score=369.60 Aligned_cols=255 Identities=24% Similarity=0.394 Sum_probs=208.0
Q ss_pred HhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
...+|...+.||+|+||.||+|... +++.||||+++.. ....++|.+|++++++++||||++++++|.+++..+
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 292 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 292 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-----SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-----ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEE
Confidence 3456888899999999999999765 4889999998652 234688999999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+||||+++|+|.++++... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 293 lv~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 368 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLM 368 (495)
T ss_dssp EEEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECC
T ss_pred EEEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceec
Confidence 9999999999999998643 34589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCC-ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC
Q 044366 803 EPHSSN-WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP 880 (918)
Q Consensus 803 ~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (918)
...... .....+++.|+|||++.+..++.++|||||||++|||++ |..||...... . ....+... .+.+.
T Consensus 369 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~---~~~~~~~~--~~~~~- 440 (495)
T 1opk_A 369 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--Q---VYELLEKD--YRMER- 440 (495)
T ss_dssp TTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G---HHHHHHTT--CCCCC-
T ss_pred cCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--H---HHHHHHcC--CCCCC-
Confidence 543221 122345788999999998899999999999999999999 99997654321 1 11111111 11111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
+.. ....+.+++.+||+.||++|||++++++.|++
T Consensus 441 ~~~---~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~ 475 (495)
T 1opk_A 441 PEG---CPEKVYELMRACWQWNPSDRPSFAEIHQAFET 475 (495)
T ss_dssp CTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CCC---CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 111 22467889999999999999999999999863
No 119
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.1e-38 Score=352.19 Aligned_cols=253 Identities=23% Similarity=0.311 Sum_probs=193.5
Q ss_pred HhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
..++|...+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 92 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG-----AAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA 92 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESS-----TTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecC-----ccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEE
Confidence 3468999999999999999999654 7999999998652 223467899999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCc--EEEecccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYE--AHVSDFGFAK 800 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~DfG~~~ 800 (918)
+||||+++|+|.+++...+ .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 93 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~ 166 (361)
T 3uc3_A 93 IIMEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK 166 (361)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-
T ss_pred EEEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccc
Confidence 9999999999999997643 489999999999999999999999 9999999999999987765 9999999997
Q ss_pred ccCCCCCCceecccccccccccccccCCCCcc-cchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCC
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELAYTMRATEK-YDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPT 879 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (918)
..... .......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||......... .. ....+.......
T Consensus 167 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~-~~---~~~~~~~~~~~~ 241 (361)
T 3uc3_A 167 SSVLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY-RK---TIQRILSVKYSI 241 (361)
T ss_dssp ---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH-HH---HHHHHHTTCCCC
T ss_pred ccccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH-HH---HHHHHhcCCCCC
Confidence 54322 22344579999999999988887655 89999999999999999998754321111 11 111111211111
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 880 PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 880 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
+.. ......+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~--~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 242 PDD--IRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp CTT--SCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCc--CCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 111 011246788999999999999999999975
No 120
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.4e-39 Score=356.48 Aligned_cols=261 Identities=23% Similarity=0.379 Sum_probs=207.0
Q ss_pred HHHHhcCCCCceeeccccceEEEEEEeC-CC-----CEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEec
Q 044366 641 ITKATGNFGEKYCIGKGGQRSVYKAELP-SG-----NIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHG 713 (918)
Q Consensus 641 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~ 713 (918)
.+...++|...+.||+|+||.||+|... ++ ..||+|.+.... .....+.+.+|+.+++.+ +||||+++++
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 117 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---HADEKEALMSELKIMSHLGQHENIVNLLG 117 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---ChHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 3445678999999999999999999653 23 479999986532 122356799999999999 8999999999
Q ss_pred ccccCCceEEEEEeccCCChhHHhhcccc-----------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCC
Q 044366 714 FCSNAQHSFIVCEYLARGSLTTILRDDAA-----------AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKN 782 (918)
Q Consensus 714 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 782 (918)
++.+++..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+. +|+||||||+|
T Consensus 118 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 194 (333)
T 2i1m_A 118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARN 194 (333)
T ss_dssp EECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred EEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccce
Confidence 99999999999999999999999975421 24579999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeccccccccCCCCCC--ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhh
Q 044366 783 VLLDSEYEAHVSDFGFAKFLEPHSSN--WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIF 859 (918)
Q Consensus 783 ill~~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~ 859 (918)
|+++.++.+||+|||++......... .....+++.|+|||++.+..++.++||||||+++|||++ |..||.......
T Consensus 195 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 274 (333)
T 2i1m_A 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 274 (333)
T ss_dssp CEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH
T ss_pred EEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH
Confidence 99999999999999999876543322 223456789999999999899999999999999999998 899976433211
Q ss_pred hhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 860 SSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
. .... ...... .. ..... ...+.+++.+||+.||.+|||+.|+++.|+
T Consensus 275 ~-~~~~---~~~~~~--~~-~~~~~---~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 322 (333)
T 2i1m_A 275 K-FYKL---VKDGYQ--MA-QPAFA---PKNIYSIMQACWALEPTHRPTFQQICSFLQ 322 (333)
T ss_dssp H-HHHH---HHHTCC--CC-CCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred H-HHHH---HhcCCC--CC-CCCCC---CHHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence 1 1111 111111 11 11111 246788999999999999999999999885
No 121
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=5.2e-39 Score=349.02 Aligned_cols=257 Identities=23% Similarity=0.356 Sum_probs=207.4
Q ss_pred HhcCCCCceeeccccceEEEEEEe------CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL------PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN 717 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 717 (918)
..++|...+.||+|+||.||+|.. .+++.||||+++... .....+.+.+|+++++.++||||+++++++.+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 97 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ 97 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCceeeEEEEEec
Confidence 456788999999999999999964 345889999986531 22235678999999999999999999999999
Q ss_pred CCceEEEEEeccCCChhHHhhcccc---------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEc
Q 044366 718 AQHSFIVCEYLARGSLTTILRDDAA---------------------AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHR 776 (918)
Q Consensus 718 ~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 776 (918)
++..++||||+++|+|.+++..... ...+++.+++.++.|+++||+|||+. +|+||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~ 174 (314)
T 2ivs_A 98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHR 174 (314)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECC
T ss_pred CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccc
Confidence 9999999999999999999976532 23489999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCcEEEeccccccccCCCCCC--ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCC
Q 044366 777 DISSKNVLLDSEYEAHVSDFGFAKFLEPHSSN--WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGD 853 (918)
Q Consensus 777 dlk~~Nill~~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~ 853 (918)
||||+||+++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||.
T Consensus 175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 254 (314)
T 2ivs_A 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254 (314)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999877544332 223456788999999999889999999999999999999 999986
Q ss_pred cchhhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 854 FVSTIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
..... ... ..... ........ .....+.+++.+||+.||++|||++|+++.|+
T Consensus 255 ~~~~~--~~~---~~~~~---~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~ 307 (314)
T 2ivs_A 255 GIPPE--RLF---NLLKT---GHRMERPD---NCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307 (314)
T ss_dssp TCCGG--GHH---HHHHT---TCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCHH--HHH---HHhhc---CCcCCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 54321 111 11111 11111111 12346888999999999999999999999886
No 122
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=8.3e-39 Score=340.61 Aligned_cols=251 Identities=21% Similarity=0.282 Sum_probs=205.0
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
..++|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF----VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIY 82 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG----CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc----cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEE
Confidence 346789999999999999999965 467899999987642 234678999999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeee---CCCCcEEEeccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLL---DSEYEAHVSDFGFA 799 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfG~~ 799 (918)
+||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 83 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~ 156 (277)
T 3f3z_A 83 LVMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156 (277)
T ss_dssp EEEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence 9999999999999987643 489999999999999999999999 99999999999999 78889999999999
Q ss_pred cccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCC
Q 044366 800 KFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPT 879 (918)
Q Consensus 800 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (918)
....+.. ......||+.|+|||++.+. ++.++||||+|+++|||++|+.||....... . ...+.......
T Consensus 157 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~---~~~~~~~~~~~ 226 (277)
T 3f3z_A 157 ARFKPGK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-----V---MLKIREGTFTF 226 (277)
T ss_dssp EECCTTS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-----H---HHHHHHCCCCC
T ss_pred eeccCcc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH-----H---HHHHHhCCCCC
Confidence 8776433 33445789999999998764 8999999999999999999999987543211 0 11111112221
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 880 PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 880 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
+..........+.+++.+|++.||++|||+.|+++
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 227 PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111123457889999999999999999999875
No 123
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.1e-38 Score=362.79 Aligned_cols=249 Identities=28% Similarity=0.413 Sum_probs=202.0
Q ss_pred HhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC-ceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ-HSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~ 722 (918)
..++|...+.||+|+||.||+|... |+.||||+++.. ...+.|.+|++++++++||||+++++++...+ ..+
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 263 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY 263 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSC------TTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCc------hHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceE
Confidence 3467888899999999999999874 789999998653 23578999999999999999999999986654 789
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+||||+++|+|.++++... ...+++..++.++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 264 iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 339 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 339 (450)
T ss_dssp EEEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence 9999999999999998653 23479999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 803 EPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 803 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
.... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... . ....+.. ..+.+. +
T Consensus 340 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~---~~~~i~~--~~~~~~-p 408 (450)
T 1k9a_A 340 SSTQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--D---VVPRVEK--GYKMDA-P 408 (450)
T ss_dssp C---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--T---HHHHHHT--TCCCCC-C
T ss_pred cccc---cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H---HHHHHHc--CCCCCC-C
Confidence 4321 22356889999999999999999999999999999998 99998654321 1 1111111 111111 1
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.. ....+.+++.+||+.||++|||+.++++.|+
T Consensus 409 ~~---~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 409 DG---CPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cc---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 22 2346788999999999999999999999885
No 124
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=344.68 Aligned_cols=251 Identities=26% Similarity=0.413 Sum_probs=196.1
Q ss_pred cCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVC 725 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 725 (918)
++|...+.||+|+||.||+|+. .++.||||++... ...+.|.+|++++++++||||+++++++.+ ..++||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~ 78 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVM 78 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEE
Confidence 5788889999999999999987 4788999998532 235789999999999999999999999874 489999
Q ss_pred EeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCc-EEEeccccccccCC
Q 044366 726 EYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYE-AHVSDFGFAKFLEP 804 (918)
Q Consensus 726 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-~kl~DfG~~~~~~~ 804 (918)
||+++|+|.+++........+++.+++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999987654455899999999999999999999932229999999999999998886 79999999986543
Q ss_pred CCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcch
Q 044366 805 HSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDV 884 (918)
Q Consensus 805 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 884 (918)
. .....||+.|+|||++.+..++.++||||||+++|||++|+.||+........... .......+.....
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~- 228 (307)
T 2eva_A 159 H---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW------AVHNGTRPPLIKN- 228 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH------HHHTTCCCCCBTT-
T ss_pred c---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH------HHhcCCCCCcccc-
Confidence 2 23346899999999999999999999999999999999999998643321111100 1111111111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 885 TDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 885 ~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
....+.+++.+||+.||++|||++|+++.|+
T Consensus 229 --~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 229 --LPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp --CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --cCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 2245788999999999999999999999875
No 125
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.5e-39 Score=349.39 Aligned_cols=259 Identities=21% Similarity=0.345 Sum_probs=208.3
Q ss_pred HhcCCCCceeeccccceEEEEEEe------CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccc
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL------PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCS 716 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 716 (918)
..++|...+.||+|+||.||+|.. .+++.||||+++... .....+.+.+|+.+++++ +||||+++++++.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch---hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 346788999999999999999964 357799999987532 122357799999999999 9999999999999
Q ss_pred cCCceEEEEEeccCCChhHHhhcccc---------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCC
Q 044366 717 NAQHSFIVCEYLARGSLTTILRDDAA---------------AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSK 781 (918)
Q Consensus 717 ~~~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 781 (918)
+++..++||||+++|+|.+++..... ...+++.+++.++.|+++||+|||+. +|+||||||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~ 174 (313)
T 1t46_A 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAAR 174 (313)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccc
Confidence 99999999999999999999976532 22489999999999999999999999 9999999999
Q ss_pred CeeeCCCCcEEEeccccccccCCCCCC--ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhh
Q 044366 782 NVLLDSEYEAHVSDFGFAKFLEPHSSN--WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTI 858 (918)
Q Consensus 782 Nill~~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~ 858 (918)
||+++.++.+||+|||++......... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 254 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence 999999999999999999877654332 223456789999999999999999999999999999999 99998654321
Q ss_pred hhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 859 FSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
... .. ........ ..... ....+.+++.+||+.||.+|||++|+++.|++
T Consensus 255 ~~~-~~---~~~~~~~~---~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 255 SKF-YK---MIKEGFRM---LSPEH---APAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (313)
T ss_dssp HHH-HH---HHHHTCCC---CCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hHH-HH---HhccCCCC---CCccc---CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 111 11 11111111 11111 22468889999999999999999999999863
No 126
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=6.1e-39 Score=346.35 Aligned_cols=262 Identities=22% Similarity=0.342 Sum_probs=205.0
Q ss_pred hcCCCCceeeccccceEEEEEEe-----CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccC-
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-----PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNA- 718 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~- 718 (918)
...|...+.||+|+||.||+|++ .+++.||||+++... .....+.+.+|+++++.++||||+++++++.+.
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc---cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence 35588889999999999999973 468899999987542 334467899999999999999999999999766
Q ss_pred -CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccc
Q 044366 719 -QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFG 797 (918)
Q Consensus 719 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 797 (918)
...++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 171 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFG 171 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCT
T ss_pred CceEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccc
Confidence 66899999999999999996542 3589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCC---ceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhh-------hhhHh
Q 044366 798 FAKFLEPHSSN---WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSI-------SNMII 867 (918)
Q Consensus 798 ~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~-------~~~~~ 867 (918)
++......... .....||..|+|||++.+..++.++||||+|+++|||++|+.|+.......... .....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp TCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH
T ss_pred ccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH
Confidence 99887654422 234567888999999999899999999999999999999999854332111000 00000
Q ss_pred hhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 868 EVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
................ ....+.+++.+||+.||.+|||++|+++.|+
T Consensus 252 ~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 298 (302)
T 4e5w_A 252 LVNTLKEGKRLPCPPN---CPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298 (302)
T ss_dssp HHHHHHTTCCCCCCTT---CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhccCCCCCCCC---CCHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 1111111111111112 2346889999999999999999999999986
No 127
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5.2e-39 Score=350.50 Aligned_cols=253 Identities=23% Similarity=0.419 Sum_probs=197.0
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCE----EEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNI----FAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ 719 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 719 (918)
.++|...+.||+|+||.||+|.. .+|+. ||+|.++.. ......+.|.+|+.++++++||||+++++++.++.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc---cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC
Confidence 35788999999999999999964 35554 577877542 23344678999999999999999999999998754
Q ss_pred ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccc
Q 044366 720 HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFA 799 (918)
Q Consensus 720 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~ 799 (918)
.++|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a 164 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHH
T ss_pred -eEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcce
Confidence 789999999999999997643 4589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC--ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 800 KFLEPHSSN--WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 800 ~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
+........ .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||+..... .... .... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~---~~~~--~~~ 237 (327)
T 3poz_A 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISS---ILEK--GER 237 (327)
T ss_dssp HHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH---HHHT--TCC
T ss_pred eEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHH---HHHc--CCC
Confidence 877544332 233456889999999999999999999999999999999 99998654321 1111 1111 111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.+.+ .. ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 238 ~~~~-~~---~~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 238 LPQP-PI---CTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCCC-TT---BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred CCCC-cc---CCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 1111 11 2346788999999999999999999999875
No 128
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=5.6e-39 Score=365.51 Aligned_cols=254 Identities=26% Similarity=0.449 Sum_probs=201.9
Q ss_pred HhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
..++|...+.||+|+||.||+|....+..||||+++.. ....++|.+|++++++++||||+++++++.+ +..++
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~i 255 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-----TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 255 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-----SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccC-----CCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEE
Confidence 45678888999999999999999888888999998753 2346789999999999999999999999876 67899
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.++++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 256 v~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 256 VTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp EECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred EehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 999999999999997532 24589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC-ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 804 PHSSN-WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 804 ~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
..... .....++..|+|||++.+..++.++||||||+++|||++ |+.||...... .+ ...+.. ..+.+.+
T Consensus 332 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~---~~~i~~--~~~~~~~- 403 (452)
T 1fmk_A 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EV---LDQVER--GYRMPCP- 403 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HH---HHHHHT--TCCCCCC-
T ss_pred CCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--HH---HHHHHc--CCCCCCC-
Confidence 43221 223456789999999999999999999999999999999 99998644321 01 111111 1111111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
.. ....+.+++.+||+.||++|||++++++.|+.
T Consensus 404 ~~---~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~ 437 (452)
T 1fmk_A 404 PE---CPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437 (452)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CC---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 12 23467889999999999999999999998863
No 129
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.1e-39 Score=359.29 Aligned_cols=266 Identities=20% Similarity=0.270 Sum_probs=209.3
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC--ce
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ--HS 721 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~ 721 (918)
.++|...+.||+|+||.||+|... +|+.||||+++... .....+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS---FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG---GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc---ccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence 357889999999999999999654 69999999987532 2234678899999999999999999999987654 77
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeee----CCCCcEEEeccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLL----DSEYEAHVSDFG 797 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~DfG 797 (918)
++||||+++|+|.++++.......+++.+++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 99999999999999998765555589999999999999999999999 99999999999999 777889999999
Q ss_pred cccccCCCCCCceeccccccccccccccc--------CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhh
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAYT--------MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEV 869 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~ 869 (918)
+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.................
T Consensus 162 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 162 AARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp GCEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred CceEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 998765432 2234578999999999865 5678899999999999999999999753322111111110000
Q ss_pred hhh-----------------cccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 870 NQI-----------------LDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 870 ~~~-----------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
... .....+............+.+++.+||+.||++||+++|+++.++
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 000 000112222223456677889999999999999999999998774
No 130
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2e-39 Score=369.37 Aligned_cols=252 Identities=24% Similarity=0.286 Sum_probs=197.0
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
..++|...+.||+|+||.||+|.. .+|+.||||+++..... .......+.+|+.+++.++||||+++++++.+.+..+
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 224 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLC 224 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CCCCCSCTTSCCEEEEEEETTEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEE
Confidence 346799999999999999999954 57999999999764322 2233467889999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHH-DCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++.
T Consensus 225 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 225 FVMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp EEECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EEEeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 9999999999999997643 48999999999999999999998 7 999999999999999999999999999987
Q ss_pred cCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 802 LEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 802 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
............||+.|+|||++.+..++.++|||||||++|||++|+.||...... ... ..+.......+
T Consensus 299 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~------~~i~~~~~~~p- 369 (446)
T 4ejn_A 299 GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLF------ELILMEEIRFP- 369 (446)
T ss_dssp TCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH------HHHHHCCCCCC-
T ss_pred ccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHH------HHHHhCCCCCC-
Confidence 655544555678999999999999999999999999999999999999998654321 000 11111111111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARP-----TMKEVCN 914 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RP-----t~~evl~ 914 (918)
.. ....+.+++.+||+.||++|| +++|+++
T Consensus 370 ~~---~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 370 RT---LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp TT---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred cc---CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11 124678899999999999999 9999975
No 131
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1e-38 Score=341.23 Aligned_cols=253 Identities=22% Similarity=0.348 Sum_probs=204.8
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|.+.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 46899999999999999999965 5699999999876432 22234678899999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCc---EEEecccccc
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYE---AHVSDFGFAK 800 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~DfG~~~ 800 (918)
||||+++|+|.+++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||.+.
T Consensus 83 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 99999999999988764 3489999999999999999999999 9999999999999987655 9999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP 880 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (918)
...... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||....... ..... .......+
T Consensus 157 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-----~~~~~---~~~~~~~~ 227 (284)
T 3kk8_A 157 EVNDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-----LYAQI---KAGAYDYP 227 (284)
T ss_dssp ECCSSC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHHHH---HHTCCCCC
T ss_pred EcccCc-cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH-----HHHHH---HhccccCC
Confidence 765432 2344678999999999999999999999999999999999999986543211 11111 11111111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..........+.+++.+||+.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 228 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred chhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1111222356888999999999999999999976
No 132
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=6.7e-39 Score=358.79 Aligned_cols=265 Identities=21% Similarity=0.277 Sum_probs=203.5
Q ss_pred HhcCCCCceeeccc--cceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCc
Q 044366 644 ATGNFGEKYCIGKG--GQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 644 ~~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 720 (918)
..++|++.+.||+| +||.||+|+.. +|+.||||+++..... ....+.+.+|+.+++.++||||+++++++.+++.
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 100 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS--NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE 100 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC--hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence 34689999999999 99999999654 7999999999764322 2234678889999999999999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
.++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~ 176 (389)
T 3gni_B 101 LWVVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 176 (389)
T ss_dssp EEEEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccce
Confidence 999999999999999997653 24489999999999999999999999 99999999999999999999999999986
Q ss_pred ccCCCC-------CCceeccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhh
Q 044366 801 FLEPHS-------SNWTEFAGTVGYAAPELAYT--MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQ 871 (918)
Q Consensus 801 ~~~~~~-------~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 871 (918)
...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...................
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 256 (389)
T 3gni_B 177 SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 256 (389)
T ss_dssp ECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------
T ss_pred eeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCc
Confidence 543221 11123468999999999987 578999999999999999999999986533221111100000000
Q ss_pred hcccC---------------------------CC-------CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 872 ILDHR---------------------------LP-------TPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 872 ~~~~~---------------------------~~-------~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..+.. .+ ............+.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 257 LLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp -------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00000 00 000011122356889999999999999999999974
No 133
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.9e-39 Score=339.27 Aligned_cols=252 Identities=23% Similarity=0.373 Sum_probs=206.8
Q ss_pred hcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
.++|...+.||+|+||.||+|...+++.||+|++... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-----AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-----TBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEcccc-----CCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEE
Confidence 3578888999999999999998888899999998753 22357899999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
|||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp ECCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EeCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccc
Confidence 99999999999997642 4589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCc
Q 044366 805 HSS-NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSR 882 (918)
Q Consensus 805 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (918)
... ......++..|+|||++.+..++.++||||+|+++|||++ |+.||...... ....... .......+.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~i~---~~~~~~~~~ 228 (267)
T 3t9t_A 157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDIS---TGFRLYKPR 228 (267)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHH---TTCCCCCCT
T ss_pred ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-----HHHHHHh---cCCcCCCCc
Confidence 211 1123456788999999998899999999999999999999 89998654321 0111111 111111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 883 DVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 883 ~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 229 ~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (267)
T 3t9t_A 229 L---ASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 260 (267)
T ss_dssp T---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred c---CcHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1 1246788999999999999999999999986
No 134
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.8e-40 Score=358.63 Aligned_cols=256 Identities=23% Similarity=0.350 Sum_probs=187.0
Q ss_pred hcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhh--ccCCceeeEecccccCC---
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTE--IRHRNIIKFHGFCSNAQ--- 719 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~--- 719 (918)
.++|...+.||+|+||.||+|+. +|+.||||++.. .....+.+|.+++.. ++||||+++++++....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~-------~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 73 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS-------REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC--------TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSS
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEecc-------cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCcc
Confidence 36799999999999999999987 489999999754 234678888888877 79999999999997765
Q ss_pred -ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEcCCCCCCeeeCCCCc
Q 044366 720 -HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLH--------HDCIPPIVHRDISSKNVLLDSEYE 790 (918)
Q Consensus 720 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~ 790 (918)
..++||||+++|+|.++++.. .+++.+++.++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 74 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~ 146 (303)
T 3gxj_A 74 TQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 146 (303)
T ss_dssp EEEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCC
T ss_pred ceeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCC
Confidence 789999999999999999654 3788899999999999999999 77 9999999999999999999
Q ss_pred EEEeccccccccCCCCCC----ceecccccccccccccccC------CCCcccchhhHHHHHHHHHhC----------CC
Q 044366 791 AHVSDFGFAKFLEPHSSN----WTEFAGTVGYAAPELAYTM------RATEKYDVYSFGVLALEVIKG----------YH 850 (918)
Q Consensus 791 ~kl~DfG~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~vl~el~tg----------~~ 850 (918)
+||+|||++......... .....||+.|+|||++.+. .++.++|||||||++|||++| ..
T Consensus 147 ~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~ 226 (303)
T 3gxj_A 147 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226 (303)
T ss_dssp C-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCC
T ss_pred EEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeec
Confidence 999999999876544332 1334789999999998776 345689999999999999999 45
Q ss_pred CCCcchhhhhhhhhhHhhhhhhcccCC-CCCCc--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 851 PGDFVSTIFSSISNMIIEVNQILDHRL-PTPSR--DVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 851 p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
||................ ...... +..+. ...+....+.+++.+||+.||++|||++|+++.|++
T Consensus 227 p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 294 (303)
T 3gxj_A 227 PYYDLVPSDPSVEEMRKV---VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp TTTTTCC-CCCCC-CHHH---HTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC
T ss_pred cccccCCCCccHHHHHHH---HHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 543221111111111111 111111 11111 122455679999999999999999999999999874
No 135
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=6.4e-39 Score=349.65 Aligned_cols=259 Identities=21% Similarity=0.335 Sum_probs=191.3
Q ss_pred HHhcCCCCceeeccccceEEEEEEeCC-CC---EEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccC
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAELPS-GN---IFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNA 718 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 718 (918)
...++|...+.||+|+||.||+|.... ++ .||||+++.... .....+.+.+|+++++.++||||+++++++...
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII--ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc--CHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 345689999999999999999997643 32 799999876422 223357899999999999999999999999776
Q ss_pred Cce------EEEEEeccCCChhHHhhcccc---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC
Q 044366 719 QHS------FIVCEYLARGSLTTILRDDAA---AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY 789 (918)
Q Consensus 719 ~~~------~lv~e~~~~gsL~~~l~~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 789 (918)
+.. ++||||+++|+|.+++..... ...+++.+++.++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDM 174 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTS
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCC
Confidence 654 999999999999999965431 22589999999999999999999999 999999999999999999
Q ss_pred cEEEeccccccccCCCCCC--ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhH
Q 044366 790 EAHVSDFGFAKFLEPHSSN--WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMI 866 (918)
Q Consensus 790 ~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~ 866 (918)
.+||+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ..
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-----~~ 249 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE-----IY 249 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----HH
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH-----HH
Confidence 9999999999876543321 223456789999999999999999999999999999999 899986543210 00
Q ss_pred hhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 867 IEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.............. ....+.+++.+||+.||++|||+.++++.|+
T Consensus 250 ---~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 250 ---NYLIGGNRLKQPPE---CMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp ---HHHHTTCCCCCCTT---CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred ---HHHhcCCCCCCCCc---cCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11111111111111 2246888999999999999999999999886
No 136
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-38 Score=348.64 Aligned_cols=267 Identities=24% Similarity=0.326 Sum_probs=200.4
Q ss_pred HHHHHHHhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc--cCCceeeEeccc
Q 044366 638 YEEITKATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI--RHRNIIKFHGFC 715 (918)
Q Consensus 638 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~ 715 (918)
........++|...+.||+|+||.||+|+.. |+.||||++... ....+..|.+++... +||||+++++++
T Consensus 29 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~ 100 (337)
T 3mdy_A 29 LLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-------EEASWFRETEIYQTVLMRHENILGFIAAD 100 (337)
T ss_dssp HHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-------GHHHHHHHHHHHTSTTCCCTTBCCEEEEE
T ss_pred cccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-------ccchhhhHHHHHHHHhhcCCCeeeEEEEE
Confidence 3344455678999999999999999999874 899999998542 134556666666554 899999999998
Q ss_pred ccC----CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEEcCCCCCCeeeC
Q 044366 716 SNA----QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDC-----IPPIVHRDISSKNVLLD 786 (918)
Q Consensus 716 ~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nill~ 786 (918)
... ...++||||+++|+|.++++.. .+++.+++.++.|++.||+|||+.. .++|+||||||+||+++
T Consensus 101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~ 176 (337)
T 3mdy_A 101 IKGTGSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK 176 (337)
T ss_dssp EESCGGGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC
T ss_pred ccCCCCCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC
Confidence 776 6789999999999999999753 4899999999999999999999762 23899999999999999
Q ss_pred CCCcEEEeccccccccCCCCCCc----eecccccccccccccccCCCCcc------cchhhHHHHHHHHHhC--------
Q 044366 787 SEYEAHVSDFGFAKFLEPHSSNW----TEFAGTVGYAAPELAYTMRATEK------YDVYSFGVLALEVIKG-------- 848 (918)
Q Consensus 787 ~~~~~kl~DfG~~~~~~~~~~~~----~~~~g~~~y~aPE~~~~~~~~~~------~Dv~slG~vl~el~tg-------- 848 (918)
.++.+||+|||+++.+....... ....||+.|+|||++.+...+.+ +|||||||++|||++|
T Consensus 177 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~ 256 (337)
T 3mdy_A 177 KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVE 256 (337)
T ss_dssp TTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccc
Confidence 99999999999998765443221 24578999999999987766654 9999999999999999
Q ss_pred --CCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC-cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 849 --YHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS-RDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 849 --~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
+.||............... .......+...+. .........+.+++.+||+.||++|||++|+++.|+
T Consensus 257 ~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 327 (337)
T 3mdy_A 257 EYQLPYHDLVPSDPSYEDMRE-IVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327 (337)
T ss_dssp CCCCTTTTTSCSSCCHHHHHH-HHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred cccccHhhhcCCCCchhhhHH-HHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence 4554332111111111111 0111111111111 112255677999999999999999999999999986
No 137
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=8.3e-40 Score=354.33 Aligned_cols=255 Identities=24% Similarity=0.325 Sum_probs=194.8
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCc---
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH--- 720 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--- 720 (918)
.++|...+.||+|+||.||+|+. .+++.||||+++..... .......+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTT-SHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccC-CHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 46899999999999999999964 67899999998764221 22224578999999999999999999999866544
Q ss_pred -eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccc
Q 044366 721 -SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFA 799 (918)
Q Consensus 721 -~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~ 799 (918)
.++||||+++|+|.++++... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred ccEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 399999999999999997643 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC---CceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 800 KFLEPHSS---NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 800 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
..+..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.......... ......
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~--------~~~~~~ 235 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY--------QHVRED 235 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--------HHHHCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH--------HHhcCC
Confidence 87654322 2234568999999999999999999999999999999999999987543321110 011111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
...+..........+.+++.+||+.||++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 11100001112356889999999999999998777664
No 138
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.2e-39 Score=354.61 Aligned_cols=250 Identities=25% Similarity=0.311 Sum_probs=195.6
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHH-HhhccCCceeeEecccccCCceE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLA-LTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
.++|...+.||+|+||.||+|+.. +++.||+|+++....... .....+.+|..+ ++.++||||+++++++.+.+..+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~-~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKK-KEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhh-HHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 467999999999999999999654 688999999976543322 224556777776 57789999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 116 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 9999999999999997643 489999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCc
Q 044366 803 EPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSR 882 (918)
Q Consensus 803 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (918)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .. ...+.......+ .
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~-------~~~i~~~~~~~~-~ 260 (373)
T 2r5t_A 190 IEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-EM-------YDNILNKPLQLK-P 260 (373)
T ss_dssp BCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-HH-------HHHHHHSCCCCC-S
T ss_pred ccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-HH-------HHHHHhcccCCC-C
Confidence 54444455678999999999999999999999999999999999999998654321 11 111111111111 1
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 044366 883 DVTDKLRSIMEVAILCLVENPEARPTMKEVC 913 (918)
Q Consensus 883 ~~~~~~~~l~~li~~cl~~dp~~RPt~~evl 913 (918)
.. ...+.+++.+||+.||++||++.+.+
T Consensus 261 ~~---~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 261 NI---TNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp SS---CHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred CC---CHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 12 24578899999999999999985433
No 139
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=8.4e-39 Score=339.47 Aligned_cols=251 Identities=20% Similarity=0.299 Sum_probs=201.6
Q ss_pred hcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccC--CceE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNA--QHSF 722 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 722 (918)
.++|...+.||+|+||.||+|+. .|+.||||+++.... .....+.|.+|+.+++.++||||+++++++.+. +..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDW--STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTC--CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence 36788899999999999999987 489999999876321 222346799999999999999999999999776 7889
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPP--IVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
+||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. + ++||||||+||+++.++.++++|||++.
T Consensus 86 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp EEEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred eeecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEecccee
Confidence 9999999999999998643 23589999999999999999999998 7 9999999999999999999999999876
Q ss_pred ccCCCCCCceecccccccccccccccCCCCc---ccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELAYTMRATE---KYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
.... ....||+.|+|||.+.+..++. ++||||||+++|||++|+.||......... .. .......
T Consensus 162 ~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-----~~--~~~~~~~ 229 (271)
T 3kmu_A 162 SFQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG-----MK--VALEGLR 229 (271)
T ss_dssp TTSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH-----HH--HHHSCCC
T ss_pred eecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH-----HH--HHhcCCC
Confidence 5432 2346799999999998765544 799999999999999999998654321110 00 0111111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
+..... ....+.+++.+||+.||++|||++|+++.|+
T Consensus 230 ~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~~il~~L~ 266 (271)
T 3kmu_A 230 PTIPPG---ISPHVSKLMKICMNEDPAKRPKFDMIVPILE 266 (271)
T ss_dssp CCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111112 2346888999999999999999999999986
No 140
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=7.5e-39 Score=341.60 Aligned_cols=254 Identities=24% Similarity=0.344 Sum_probs=192.8
Q ss_pred HhcCCCCceeeccccceEEEEEEeC----CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELP----SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ 719 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 719 (918)
..++|...+.||+|+||.||+|... .+..||+|+++.. ......+.+.+|+.++++++||||+++++++. ++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~ 88 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT---TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SS
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cC
Confidence 4568889999999999999999653 2457999997653 12223567999999999999999999999985 46
Q ss_pred ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccc
Q 044366 720 HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFA 799 (918)
Q Consensus 720 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~ 799 (918)
..++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 163 (281)
T 1mp8_A 89 PVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLS 163 (281)
T ss_dssp SCEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----
T ss_pred ccEEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccc
Confidence 7899999999999999997542 3589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC-CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 800 KFLEPHSS-NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 800 ~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
+....... ......+++.|+|||++.+..++.++||||||+++|||++ |..||...... . ... .+.....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-~----~~~---~i~~~~~ 235 (281)
T 1mp8_A 164 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-D----VIG---RIENGER 235 (281)
T ss_dssp ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-G----HHH---HHHTTCC
T ss_pred cccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-H----HHH---HHHcCCC
Confidence 87654332 2233456789999999998899999999999999999997 99998654321 0 111 1111111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
...... ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 236 ~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 272 (281)
T 1mp8_A 236 LPMPPN---CPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272 (281)
T ss_dssp CCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCC---CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111112 2346788999999999999999999999886
No 141
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.3e-38 Score=348.68 Aligned_cols=257 Identities=23% Similarity=0.369 Sum_probs=205.5
Q ss_pred HhcCCCCceeeccccceEEEEEEe--------CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecc
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL--------PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGF 714 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 714 (918)
..++|...+.||+|+||.||+|+. .+++.||||+++... .....+.+.+|+++++.+ +||||++++++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 109 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGA 109 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---cHHHHHHHHHHHHHHHHhhcCCCEeeEEEE
Confidence 347899999999999999999975 356789999987532 222356789999999999 89999999999
Q ss_pred cccCCceEEEEEeccCCChhHHhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCC
Q 044366 715 CSNAQHSFIVCEYLARGSLTTILRDDAA-------------AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSK 781 (918)
Q Consensus 715 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 781 (918)
+.+++..++||||+++|+|.+++..... ...+++.+++.++.|+++||+|||+. +|+||||||+
T Consensus 110 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~ 186 (334)
T 2pvf_A 110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186 (334)
T ss_dssp ECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred EccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccc
Confidence 9999999999999999999999986532 23489999999999999999999999 9999999999
Q ss_pred CeeeCCCCcEEEeccccccccCCCCCC--ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhh
Q 044366 782 NVLLDSEYEAHVSDFGFAKFLEPHSSN--WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTI 858 (918)
Q Consensus 782 Nill~~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~ 858 (918)
||+++.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 187 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 266 (334)
T 2pvf_A 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 266 (334)
T ss_dssp GEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred eEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH
Confidence 999999999999999999877543321 223456789999999998889999999999999999999 99998644321
Q ss_pred hhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 859 FSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
. ....... ......... ....+.+++.+||+.||.+|||+.|+++.|+
T Consensus 267 --~---~~~~~~~---~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 314 (334)
T 2pvf_A 267 --E---LFKLLKE---GHRMDKPAN---CTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314 (334)
T ss_dssp --H---HHHHHHH---TCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --H---HHHHHhc---CCCCCCCcc---CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1 1111111 111111111 2246788999999999999999999999886
No 142
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.1e-39 Score=347.37 Aligned_cols=260 Identities=22% Similarity=0.319 Sum_probs=198.1
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|++++++++||||+++++++.+++..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE--DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC--C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc--cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 6788999999999999999965 469999999886531 1222246788999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
|||+++++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp EECCSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEeCCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 9999999999988754 3489999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhh-------------h
Q 044366 805 HSSNWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEV-------------N 870 (918)
Q Consensus 805 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-------------~ 870 (918)
.........|++.|+|||++.+ ..++.++||||+|+++|+|++|+.||......... ....... .
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 155 PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL-YLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCSCCHHHHHHHHTC
T ss_pred cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhcccccccccccccc
Confidence 5544556678999999999876 56799999999999999999999998654332111 0000000 0
Q ss_pred h-hcccCCCCCCc--c----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 871 Q-ILDHRLPTPSR--D----VTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 871 ~-~~~~~~~~~~~--~----~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
. ......+.+.. . .......+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 00011111100 0 0122346889999999999999999999985
No 143
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9.9e-39 Score=341.23 Aligned_cols=253 Identities=25% Similarity=0.328 Sum_probs=198.6
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|.. .+|+.||+|++.... .....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 97 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR---SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYI 97 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG---CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc---cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEE
Confidence 35788999999999999999965 578999999987642 33446889999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeee---CCCCcEEEeccccc
Q 044366 724 VCEYLARGSLTTILRDDA-AAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLL---DSEYEAHVSDFGFA 799 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfG~~ 799 (918)
||||+++|+|.+++.... ....+++..++.++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 999999999999986542 235589999999999999999999999 99999999999999 45678999999999
Q ss_pred cccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCC
Q 044366 800 KFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPT 879 (918)
Q Consensus 800 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (918)
....... ......|++.|+|||++. ..++.++||||+|+++|||++|+.||...... ..... ..........
T Consensus 175 ~~~~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~~----~~~~~~~~~~ 246 (285)
T 3is5_A 175 ELFKSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQK----ATYKEPNYAV 246 (285)
T ss_dssp CC-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH----HHHCCCCCCC
T ss_pred eecCCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHhh----hccCCccccc
Confidence 8765432 234567899999999876 46889999999999999999999998654321 11100 0111111111
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 880 PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 880 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.... ....+.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 247 ECRP---LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp --CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ccCc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111 2246788999999999999999999985
No 144
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.2e-38 Score=345.41 Aligned_cols=262 Identities=21% Similarity=0.302 Sum_probs=196.5
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
..++|.+.+.||+|+||.||+|.. .+|+.||||+++..... .....+.+.+|+.+++.++||||+++++++..++..+
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 108 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLM-DAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN 108 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhcc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEE
Confidence 346799999999999999999964 57999999998753211 1223567899999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 723 IVCEYLARGSLTTILRDDA-AAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
+||||+++|+|.+++.... ....+++.+++.++.|+++||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~ 185 (310)
T 2wqm_A 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRF 185 (310)
T ss_dssp EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-----
T ss_pred EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceee
Confidence 9999999999999997532 234589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 802 LEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 802 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
............|++.|+|||++.+..++.++||||||+++|+|++|+.||.......... .. .+.....+...
T Consensus 186 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~~---~~~~~~~~~~~ 259 (310)
T 2wqm_A 186 FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL---CK---KIEQCDYPPLP 259 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHH---HH---HHHTTCSCCCC
T ss_pred ecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHH---HH---HhhcccCCCCc
Confidence 7654444445678999999999999899999999999999999999999976432111111 11 11111111111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
. ......+.+++.+||+.||++|||++++++.|+
T Consensus 260 ~--~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~ 293 (310)
T 2wqm_A 260 S--DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293 (310)
T ss_dssp T--TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred c--cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 1 112346888999999999999999999999886
No 145
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=342.36 Aligned_cols=265 Identities=22% Similarity=0.292 Sum_probs=202.0
Q ss_pred HHhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccC-CCCChHHHHHHHHHHhhcc---CCceeeEeccccc
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSD-ETANPSEFLNEVLALTEIR---HRNIIKFHGFCSN 717 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~ 717 (918)
...++|+..+.||+|+||.||+|+. .+|+.||||+++...... .......+.+|+++++.++ ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3467999999999999999999965 579999999987543222 2223457788888887775 9999999999876
Q ss_pred CC-----ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEE
Q 044366 718 AQ-----HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAH 792 (918)
Q Consensus 718 ~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 792 (918)
.. ..++||||++ |+|.+++.... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 54 5799999997 59999998654 23489999999999999999999999 999999999999999999999
Q ss_pred EeccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhh
Q 044366 793 VSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQI 872 (918)
Q Consensus 793 l~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 872 (918)
|+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ............
T Consensus 161 l~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~ 238 (308)
T 3g33_A 161 LADFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLP 238 (308)
T ss_dssp ECSCSCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred EeeCccccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCC
Confidence 99999998765433 2345678999999999999999999999999999999999999986543321 111111110000
Q ss_pred cccC-----------CCCCC-cch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 873 LDHR-----------LPTPS-RDV----TDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 873 ~~~~-----------~~~~~-~~~----~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.... .+... ... .+....+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000 00000 000 112356889999999999999999999985
No 146
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.9e-38 Score=338.93 Aligned_cols=254 Identities=22% Similarity=0.335 Sum_probs=203.2
Q ss_pred cCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCC--CCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDE--TANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
++|...+.||+|+||.||+|... +|+.||+|.++....... ....+.+.+|+++++.++||||+++++++.+++..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56888999999999999999665 799999999876433322 224678999999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC----cEEEecccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY----EAHVSDFGF 798 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~DfG~ 798 (918)
+||||+++++|.+++... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++ .+||+|||.
T Consensus 85 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 999999999999999764 3489999999999999999999999 999999999999998877 799999999
Q ss_pred ccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCC
Q 044366 799 AKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLP 878 (918)
Q Consensus 799 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (918)
+....... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... ... ..+......
T Consensus 159 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~-------~~~~~~~~~ 229 (283)
T 3bhy_A 159 AHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-ETL-------TNISAVNYD 229 (283)
T ss_dssp CEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHH-------HHHHTTCCC
T ss_pred ceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-HHH-------HHhHhcccC
Confidence 98765432 234456899999999999889999999999999999999999998654321 110 111111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 879 TPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 879 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
............+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 111111122356889999999999999999999986
No 147
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.7e-39 Score=346.29 Aligned_cols=259 Identities=21% Similarity=0.308 Sum_probs=197.5
Q ss_pred HHhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCce
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 721 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 721 (918)
...++|...+.||+|+||.||+|.. .+++.||+|++...... .....+.+.+|+.+++.++||||+++++++..++..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSS-DPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL 109 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGG-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCccccc-CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeE
Confidence 3457899999999999999999965 47899999998764322 222246789999999999999999999999999999
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
++||||+++++|.+++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 110 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~ 183 (309)
T 2h34_A 110 YVDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASA 183 (309)
T ss_dssp EEEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---
T ss_pred EEEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcc
Confidence 9999999999999999764 3489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC-CCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC
Q 044366 802 LEPHS-SNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP 880 (918)
Q Consensus 802 ~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (918)
..... .......|++.|+|||++.+..++.++||||||+++|||++|+.||...... .... . +....+..
T Consensus 184 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~---~----~~~~~~~~ 254 (309)
T 2h34_A 184 TTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGA---H----INQAIPRP 254 (309)
T ss_dssp -------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHH---H----HHSCCCCG
T ss_pred ccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHH---H----hccCCCCc
Confidence 65432 2233457899999999999989999999999999999999999998754321 1111 1 11111111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHhh
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARP-TMKEVCNLLC 917 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RP-t~~evl~~L~ 917 (918)
..........+.+++.+||+.||++|| +++++++.|+
T Consensus 255 ~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 255 STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 011111224578899999999999999 9999999885
No 148
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-38 Score=359.62 Aligned_cols=250 Identities=24% Similarity=0.361 Sum_probs=206.2
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|... +|+.||||++....... ....+.+.+|+.+++.++||||+++++++...+..++
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l 93 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS-LDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM 93 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH-TTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 367899999999999999999654 79999999997643222 2335789999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.+++... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 94 v~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 94 VMEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EEECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 99999999999999754 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceecccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCc
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMRA-TEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSR 882 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (918)
... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+..... ... ..+.......+ .
T Consensus 168 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-----~~~---~~i~~~~~~~p-~ 237 (476)
T 2y94_A 168 DGE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-----TLF---KKICDGIFYTP-Q 237 (476)
T ss_dssp TTC-CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-----HHH---HHHHTTCCCCC-T
T ss_pred ccc-cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-----HHH---HHHhcCCcCCC-c
Confidence 432 3345679999999999988765 68999999999999999999998754321 111 11112222111 1
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 883 DVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 883 ~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.. ...+.+++.+||+.||++|||++|+++
T Consensus 238 ~~---s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 238 YL---NPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp TC---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cC---CHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 11 245788999999999999999999985
No 149
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.2e-38 Score=343.41 Aligned_cols=255 Identities=16% Similarity=0.187 Sum_probs=204.6
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCCceE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 722 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++... ...+.+.+|+..++.+ +|++++++++++.++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 82 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR------SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 82 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC------TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC------CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeE
Confidence 46799999999999999999964 68999999988542 1234678999999999 7999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCc-----EEEeccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYE-----AHVSDFG 797 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~DfG 797 (918)
+||||+ +++|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 83 lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred EEEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 999999 89999999864 23589999999999999999999999 9999999999999988776 9999999
Q ss_pred cccccCCCCC-------CceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhh--hhhhhhHhh
Q 044366 798 FAKFLEPHSS-------NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIF--SSISNMIIE 868 (918)
Q Consensus 798 ~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~--~~~~~~~~~ 868 (918)
+++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK 236 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH
T ss_pred cccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh
Confidence 9987765432 1244578999999999999999999999999999999999999987532211 111110000
Q ss_pred hhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 869 VNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
... ...+ .........+.+++.+||+.||++|||+++|++.|+
T Consensus 237 ~~~---~~~~---~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 237 KQS---TPLR---ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HHH---SCHH---HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred ccC---ccHH---HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 000 0000 000012356889999999999999999999999885
No 150
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-38 Score=338.31 Aligned_cols=248 Identities=23% Similarity=0.325 Sum_probs=180.6
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
++|.+.+.||+|+||.||+|.. .+|+.||+|++...... .....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcc-hHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 6899999999999999999964 57899999998764322 233467899999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
|||+ ++++.+++... ..+++.+++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++.....
T Consensus 92 ~e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred ehhc-CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 9999 56888887654 3489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceecccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcc
Q 044366 805 HSSNWTEFAGTVGYAAPELAYTMRA-TEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRD 883 (918)
Q Consensus 805 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (918)
.. ......||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||+..... . ... .+.......+ ..
T Consensus 165 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~---~~~---~~~~~~~~~~-~~ 234 (275)
T 2eue_A 165 GN-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--V---LFK---NISNGVYTLP-KF 234 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--H---HHH---HHHHTCCCCC-TT
T ss_pred cc-cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--H---HHH---HHHhCCCCCC-cc
Confidence 32 2244568999999999987765 78999999999999999999998754321 1 111 1111111111 11
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 884 VTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 884 ~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
....+.+++.+||+.||++|||++|+++
T Consensus 235 ---~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 235 ---LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---CCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 2245788999999999999999999975
No 151
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=9e-39 Score=348.41 Aligned_cols=253 Identities=25% Similarity=0.390 Sum_probs=198.7
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCE----EEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNI----FAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ 719 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 719 (918)
.++|...+.||+|+||.||+|.. .+++. ||+|.+... ........+.+|+.+++.++||||+++++++. ++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~ 87 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK---SGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GS 87 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCT---TSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BS
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccc---ccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CC
Confidence 35788899999999999999965 45554 777776543 12233456789999999999999999999986 46
Q ss_pred ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccc
Q 044366 720 HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFA 799 (918)
Q Consensus 720 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~ 799 (918)
..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a 162 (325)
T 3kex_A 88 SLQLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVA 162 (325)
T ss_dssp SEEEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGG
T ss_pred ccEEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcc
Confidence 689999999999999999764 23588999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC--CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 800 KFLEPHSS--NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 800 ~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
+.+..... ......++..|+|||++.+..++.++||||||+++|||++ |+.||...... ... ...... ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~---~~~~~~--~~ 235 (325)
T 3kex_A 163 DLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVP---DLLEKG--ER 235 (325)
T ss_dssp GGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHH---HHHHTT--CB
T ss_pred cccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHH---HHHHcC--CC
Confidence 98755432 2344567889999999999999999999999999999999 99998654321 111 111111 11
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
...+ .. ....+.+++.+||+.||.+|||+.|+++.|+
T Consensus 236 ~~~~-~~---~~~~~~~li~~~l~~dp~~Rps~~el~~~l~ 272 (325)
T 3kex_A 236 LAQP-QI---CTIDVYMVMVKCWMIDENIRPTFKELANEFT 272 (325)
T ss_dssp CCCC-TT---BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred CCCC-Cc---CcHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 11 1234778899999999999999999999885
No 152
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.1e-39 Score=349.48 Aligned_cols=246 Identities=22% Similarity=0.331 Sum_probs=204.1
Q ss_pred HhcCCCCceeeccccceEEEEEE-eCCCCEEEEEEcccccccCC----CCChHHHHHHHHHHhhccCCceeeEecccccC
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAE-LPSGNIFAVKKFKAELFSDE----TANPSEFLNEVLALTEIRHRNIIKFHGFCSNA 718 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 718 (918)
..++|...+.||+|+||.||+|. ..+|+.||||+++....... ......+.+|+++++.++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 45689999999999999999996 45789999999876432221 11345678899999999999999999999999
Q ss_pred CceEEEEEeccCC-ChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccc
Q 044366 719 QHSFIVCEYLARG-SLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFG 797 (918)
Q Consensus 719 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 797 (918)
+..++||||+.+| +|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 9999997643 489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceecccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAYTMRA-TEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
++........ .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||...... ....
T Consensus 176 ~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------------~~~~ 240 (335)
T 3dls_A 176 SAAYLERGKL-FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------------VEAA 240 (335)
T ss_dssp TCEECCTTCC-BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------------TTTC
T ss_pred cceECCCCCc-eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------------Hhhc
Confidence 9987764433 345679999999999988776 78999999999999999999998643221 1111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
...+ .. ....+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~-~~---~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 241 IHPP-YL---VSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp CCCS-SC---CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCCC-cc---cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111 11 1245788999999999999999999986
No 153
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=349.94 Aligned_cols=250 Identities=23% Similarity=0.347 Sum_probs=195.7
Q ss_pred hcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccC--CceeeEecccccCCceE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRH--RNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~ 722 (918)
.++|.+.+.||+|+||.||+|...+++.||||++.... ......+.+.+|+++++.++| |||+++++++.+++..+
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 85 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 85 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc--cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence 45688999999999999999988889999999987532 122234678999999999976 99999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+|||| .+|+|.+++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++..
T Consensus 86 lv~e~-~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 86 MVMEC-GNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEECC-CSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEEeC-CCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 99995 577999999864 3489999999999999999999999 999999999999997 578999999999877
Q ss_pred CCCCCC--ceeccccccccccccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhh
Q 044366 803 EPHSSN--WTEFAGTVGYAAPELAYT-----------MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEV 869 (918)
Q Consensus 803 ~~~~~~--~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~ 869 (918)
...... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-------~~ 230 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-------KL 230 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-------HH
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH-------HH
Confidence 544322 235679999999999865 6788999999999999999999999865332111 11
Q ss_pred hhhcccCCCC-CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 870 NQILDHRLPT-PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 870 ~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
....+..... .+... ...+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~---~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 231 HAIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp HHHHCTTSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhcCCcccCCcccC---CHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 1122211111 11111 235788999999999999999999975
No 154
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.4e-38 Score=337.43 Aligned_cols=253 Identities=22% Similarity=0.397 Sum_probs=205.1
Q ss_pred HhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
..++|...+.||+|+||.||+|...+++.||||+++.. ....+.+.+|+++++.++||||+++++++.+ +..++
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 84 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-----SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI 84 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-----SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC-----cccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEE
Confidence 34678889999999999999998888889999998652 2346789999999999999999999999864 56899
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++++|.+++.... ...+++.+++.++.|++.||+|||+. +++||||||+||++++++.+||+|||.+....
T Consensus 85 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 160 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 160 (279)
T ss_dssp EEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence 999999999999997642 23589999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCC-ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 804 PHSSN-WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 804 ~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
..... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||...... . ....... .......
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~----~~~~~~~---~~~~~~~ 232 (279)
T 1qpc_A 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-E----VIQNLER---GYRMVRP 232 (279)
T ss_dssp SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-H----HHHHHHT---TCCCCCC
T ss_pred CcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-H----HHHHHhc---ccCCCCc
Confidence 43221 123346788999999998889999999999999999999 89997653321 1 1111111 1111111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.. ....+.+++.+|++.||++|||++++++.|+
T Consensus 233 ~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 233 DN---CPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cc---ccHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 11 2246888999999999999999999999885
No 155
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.1e-39 Score=345.16 Aligned_cols=255 Identities=24% Similarity=0.392 Sum_probs=208.9
Q ss_pred HHhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCce
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 721 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 721 (918)
...++|...+.||+|+||.||+|... +++.||+|++.. .....+.+.+|+++++.++||||+++++++.+++..
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS-----CSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc-----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence 45678899999999999999999664 588999999864 223467899999999999999999999999999999
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 160 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 160 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred EEEEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCcccee
Confidence 99999999999999997643 34589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC-ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCC
Q 044366 802 LEPHSSN-WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPT 879 (918)
Q Consensus 802 ~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (918)
....... .....+++.|+|||.+.+..++.++||||+|+++|+|++ |..||...... ........... . .
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-----~~~~~~~~~~~--~-~ 232 (288)
T 3kfa_A 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKDYR--M-E 232 (288)
T ss_dssp SCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTTCC--C-C
T ss_pred ccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhccCC--C-C
Confidence 7544322 223456788999999999999999999999999999999 99997643321 11111111111 1 1
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 880 PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 880 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.... ....+.+++.+|++.||.+|||++|+++.|+
T Consensus 233 ~~~~---~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 233 RPEG---CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp CCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence 1111 2246888999999999999999999999885
No 156
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=356.18 Aligned_cols=263 Identities=22% Similarity=0.266 Sum_probs=206.4
Q ss_pred HHHHHHHhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccc
Q 044366 638 YEEITKATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCS 716 (918)
Q Consensus 638 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 716 (918)
+.+.....++|...+.||+|+||.||+|+. .+|+.||+|+++...... ....+.+.+|..++..++||||+++++++.
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~-~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK-RGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-HGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-HHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 344555678999999999999999999966 479999999986532211 112346889999999999999999999999
Q ss_pred cCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecc
Q 044366 717 NAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDF 796 (918)
Q Consensus 717 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 796 (918)
+++..++||||+++|+|.+++.+.+ ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeec
Confidence 9999999999999999999997642 3589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCC-ceecccccccccccccc-------cCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhh
Q 044366 797 GFAKFLEPHSSN-WTEFAGTVGYAAPELAY-------TMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIE 868 (918)
Q Consensus 797 G~~~~~~~~~~~-~~~~~g~~~y~aPE~~~-------~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~ 868 (918)
|+++........ ....+||+.|+|||++. +..++.++|||||||++|||++|+.||...... ........
T Consensus 207 Gla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-~~~~~i~~- 284 (412)
T 2vd5_A 207 GSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA-ETYGKIVH- 284 (412)
T ss_dssp TTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHT-
T ss_pred hhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-HHHHHHHh-
Confidence 999877654332 23457999999999987 356899999999999999999999998654321 11111110
Q ss_pred hhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCC---CCHHHHHH
Q 044366 869 VNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEAR---PTMKEVCN 914 (918)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R---Pt~~evl~ 914 (918)
... ....+..... ....+.+++.+||. +|++| |+++|+++
T Consensus 285 ~~~--~~~~p~~~~~---~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 285 YKE--HLSLPLVDEG---VPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHH--HCCCC----C---CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ccc--CcCCCccccC---CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 000 0111111111 23467889999999 99998 68999864
No 157
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=9.5e-39 Score=342.21 Aligned_cols=260 Identities=25% Similarity=0.402 Sum_probs=194.5
Q ss_pred HHhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
...++|...+.||+|+||.||+|+.. ..||||+++... ......+.|.+|+++++.++||||+++++++ ..+..+
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~ 95 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTA--PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA 95 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCE
T ss_pred cCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccC--CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccE
Confidence 44578999999999999999999863 469999987532 1223356799999999999999999999965 456689
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+||||+++++|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 96 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 96 IVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp EEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred EEEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccc
Confidence 999999999999999654 34589999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCC--CCceecccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 803 EPHS--SNWTEFAGTVGYAAPELAY---TMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 803 ~~~~--~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
.... .......||+.|+|||++. +..++.++||||||+++|||++|+.||.......... .... ........
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-~~~~--~~~~~~~~ 247 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII-EMVG--RGSLSPDL 247 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHH-HHHH--HTSCCCCT
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHH-HHhc--ccccCcch
Confidence 4322 2234457899999999986 5678889999999999999999999987543321111 1110 01111111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
.. ........+.+++.+||+.||++|||++|+++.|++
T Consensus 248 ~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 285 (289)
T 3og7_A 248 SK---VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285 (289)
T ss_dssp TS---SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hh---ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 11 111233568899999999999999999999999863
No 158
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.6e-38 Score=355.46 Aligned_cols=251 Identities=24% Similarity=0.308 Sum_probs=190.7
Q ss_pred cCCCCc-eeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhh-ccCCceeeEeccccc----C
Q 044366 646 GNFGEK-YCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTE-IRHRNIIKFHGFCSN----A 718 (918)
Q Consensus 646 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~----~ 718 (918)
++|... +.||+|+||.||+|.. .+|+.||||+++. ...+.+|++++.+ .+||||+++++++.. .
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~---------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc---------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 456665 6899999999999955 4799999999853 2467889888744 589999999998764 5
Q ss_pred CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC---CCcEEEec
Q 044366 719 QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS---EYEAHVSD 795 (918)
Q Consensus 719 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~D 795 (918)
+..++||||+++|+|.+++.... ...+++.+++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred cEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEe
Confidence 67899999999999999998643 34589999999999999999999999 9999999999999998 78899999
Q ss_pred cccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhccc
Q 044366 796 FGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDH 875 (918)
Q Consensus 796 fG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 875 (918)
||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...... +...
T Consensus 208 FG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~~~~~---i~~~ 282 (400)
T 1nxk_A 208 FGFAKETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PGMKTR---IRMG 282 (400)
T ss_dssp CTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC-CSHHHH---HHHT
T ss_pred cccccccCCCC-ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc-HHHHHH---HHcC
Confidence 99998765332 234567899999999999999999999999999999999999998654321100 000011 1111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 876 RLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 876 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
....+..........+.+++.+||+.||++|||++|+++
T Consensus 283 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 283 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111111223356889999999999999999999986
No 159
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.8e-39 Score=349.06 Aligned_cols=259 Identities=18% Similarity=0.275 Sum_probs=193.4
Q ss_pred cCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
++|...+.||+|+||.||+|... +++.||||+++..... .....+.+|+++++.++||||+++++++.+++..++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEE
Confidence 57889999999999999999654 7999999998754321 1122456799999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
|||++ |+|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 79 FEYLD-KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp EECCS-EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred ecccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 99998 5999988764 24589999999999999999999999 999999999999999999999999999987665
Q ss_pred CCCCceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccC-------
Q 044366 805 HSSNWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHR------- 876 (918)
Q Consensus 805 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 876 (918)
.........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .................
T Consensus 153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~ 231 (324)
T 3mtl_A 153 PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE-EQLHFIFRILGTPTEETWPGILSN 231 (324)
T ss_dssp ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGC
T ss_pred CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChHhchhhhcc
Confidence 5545556678999999999876 56899999999999999999999998754321 11111110000000000
Q ss_pred -------CCCCC-cc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 877 -------LPTPS-RD----VTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 877 -------~~~~~-~~----~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.+... .. .......+.+++.+|++.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000 00 0012356789999999999999999999975
No 160
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.7e-38 Score=339.48 Aligned_cols=249 Identities=26% Similarity=0.401 Sum_probs=207.3
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.+.|...+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 97 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWI 97 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT---CSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccc---cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 45688999999999999999954 579999999987542 23346889999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++++|.+++.. ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 98 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 98 IMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp EEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred EEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecC
Confidence 9999999999999974 3489999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcc
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRD 883 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (918)
..........|++.|+|||++.+..++.++||||||+++|+|++|+.||....... ..... .....+.....
T Consensus 171 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~---~~~~~~~~~~~ 242 (303)
T 3a7i_A 171 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK-----VLFLI---PKNNPPTLEGN 242 (303)
T ss_dssp TTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHH---HHSCCCCCCSS
T ss_pred ccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH-----HHHHh---hcCCCCCCccc
Confidence 55444455678999999999999899999999999999999999999986543211 00111 11111111112
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 884 VTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 884 ~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
. ...+.+++.+||+.||++|||++|+++
T Consensus 243 ~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 243 Y---SKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp C---CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred c---CHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 2 245788999999999999999999976
No 161
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.9e-38 Score=338.11 Aligned_cols=250 Identities=28% Similarity=0.419 Sum_probs=202.0
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
+.++|.+.+.||+|+||.||+|.. .+++.||+|++....... ......+.+|+++++.++||||+++++++.+.+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK-AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY 85 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-HTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccch-hhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEE
Confidence 457899999999999999999955 468899999986543222 233577999999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++...
T Consensus 86 lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 86 LILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 9999999999999997643 489999999999999999999999 9999999999999999999999999998655
Q ss_pred CCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCc
Q 044366 803 EPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSR 882 (918)
Q Consensus 803 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (918)
... ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||...... ........ .....+ .
T Consensus 160 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~---~~~~~~-~ 228 (279)
T 3fdn_A 160 PSS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-----ETYKRISR---VEFTFP-D 228 (279)
T ss_dssp ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHHH---TCCCCC-T
T ss_pred Ccc--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH-----HHHHHHHh---CCCCCC-C
Confidence 432 224457899999999999989999999999999999999999998754321 11111111 111111 1
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 883 DVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 883 ~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
. ....+.+++.+||+.||++|||++|+++
T Consensus 229 ~---~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 229 F---VTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp T---SCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred c---CCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1 1245778999999999999999999986
No 162
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.2e-39 Score=351.05 Aligned_cols=262 Identities=21% Similarity=0.350 Sum_probs=209.3
Q ss_pred HHHHHhcCCCCceeeccccceEEEEEEeC------CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEec
Q 044366 640 EITKATGNFGEKYCIGKGGQRSVYKAELP------SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHG 713 (918)
Q Consensus 640 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~ 713 (918)
+.+...++|...+.||+|+||.||+|... +++.||||.+.... .......+.+|+++++.++||||+++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 33456688999999999999999999543 47789999986431 2223457899999999999999999999
Q ss_pred ccccCCceEEEEEeccCCChhHHhhcccc-------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeC
Q 044366 714 FCSNAQHSFIVCEYLARGSLTTILRDDAA-------AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLD 786 (918)
Q Consensus 714 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 786 (918)
++.+++..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~ 172 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 172 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEEC
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEc
Confidence 99999999999999999999999976431 14579999999999999999999999 999999999999999
Q ss_pred CCCcEEEeccccccccCCCCCC--ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhh
Q 044366 787 SEYEAHVSDFGFAKFLEPHSSN--WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSIS 863 (918)
Q Consensus 787 ~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~ 863 (918)
.++.+||+|||++......... .....+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... ..
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~- 249 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QV- 249 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HH-
T ss_pred CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HH-
Confidence 9999999999999866443221 123456889999999999899999999999999999999 88997654321 00
Q ss_pred hhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 864 NMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
. ..+........... ....+.+++.+||+.||.+|||+.|+++.|++
T Consensus 250 --~---~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~ 296 (322)
T 1p4o_A 250 --L---RFVMEGGLLDKPDN---CPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296 (322)
T ss_dssp --H---HHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred --H---HHHHcCCcCCCCCC---CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 0 11111111111122 22457889999999999999999999998863
No 163
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=344.23 Aligned_cols=247 Identities=21% Similarity=0.247 Sum_probs=193.3
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCCceE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 722 (918)
.++|...++||+|+||+||+|... +|+.||||++..... .......+..|+..+..+ +||||+++++++.+++..+
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~ 133 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR--GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY 133 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC--SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc--ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEE
Confidence 367999999999999999999665 799999998765321 112234556666666555 8999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+||||+ +++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 134 lv~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 134 LQTELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EEEECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred EEEecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 999999 669999887653 4589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCc
Q 044366 803 EPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSR 882 (918)
Q Consensus 803 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (918)
.... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+...... . .+.....+. .
T Consensus 208 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~-~----------~~~~~~~~~--~ 272 (311)
T 3p1a_A 208 GTAG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW-Q----------QLRQGYLPP--E 272 (311)
T ss_dssp C-------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH-H----------HHTTTCCCH--H
T ss_pred ccCC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH-H----------HHhccCCCc--c
Confidence 5432 2344568999999999876 7899999999999999999997765432211 1 111111110 0
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 883 DVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 883 ~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
........+.+++.+||+.||++|||++|+++
T Consensus 273 ~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 273 FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 01112356889999999999999999999986
No 164
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=6.4e-38 Score=337.13 Aligned_cols=253 Identities=23% Similarity=0.337 Sum_probs=200.0
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
++|.....||+|+||.||+|.. .+++.||||.+... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 97 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER----DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF 97 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC----CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC----chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEE
Confidence 3455666899999999999964 57899999998653 233457899999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC-CCcEEEeccccccccC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS-EYEAHVSDFGFAKFLE 803 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~DfG~~~~~~ 803 (918)
|||+++++|.+++........+++..++.++.|++.||+|||+. +++||||||+||+++. ++.+||+|||.+....
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 99999999999998764445578999999999999999999999 9999999999999987 8999999999998776
Q ss_pred CCCCCceecccccccccccccccCC--CCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMR--ATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
..........|++.|+|||++.+.. ++.++||||||+++|+|++|+.||............ . ... ...+...
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~--~~~-~~~~~~~ 248 (295)
T 2clq_A 175 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---V--GMF-KVHPEIP 248 (295)
T ss_dssp C-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH---H--HHH-CCCCCCC
T ss_pred CCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh---h--ccc-ccccccc
Confidence 5443344567899999999987643 789999999999999999999998643321111110 0 000 1111111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.. ....+.+++.+||+.||++|||++|+++
T Consensus 249 ~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 ES---MSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TT---SCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cc---CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11 2246788999999999999999999985
No 165
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-38 Score=348.07 Aligned_cols=267 Identities=22% Similarity=0.292 Sum_probs=199.5
Q ss_pred HHHHhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCC-CCChHHHHHHHHHHhhccCCceeeEecccccC
Q 044366 641 ITKATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDE-TANPSEFLNEVLALTEIRHRNIIKFHGFCSNA 718 (918)
Q Consensus 641 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 718 (918)
+....++|...+.||+|+||.||+|... +|+.||||++........ ....+.+.+|+++++.++||||+++++++.+.
T Consensus 5 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (346)
T 1ua2_A 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 84 (346)
T ss_dssp --------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred hHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC
Confidence 3445678999999999999999999664 699999999875432211 12235788999999999999999999999999
Q ss_pred CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccc
Q 044366 719 QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGF 798 (918)
Q Consensus 719 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 798 (918)
+..++||||+++ +|.+++... ...+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 85 ~~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (346)
T 1ua2_A 85 SNISLVFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGL 158 (346)
T ss_dssp TCCEEEEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred CceEEEEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEeccc
Confidence 999999999986 899888754 24588899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceecccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 799 AKFLEPHSSNWTEFAGTVGYAAPELAYTM-RATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 799 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
++.............||+.|+|||++.+. .++.++|||||||++|||++|.+||...... .................+
T Consensus 159 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~~ 237 (346)
T 1ua2_A 159 AKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQW 237 (346)
T ss_dssp GSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTS
T ss_pred ceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhhh
Confidence 98876555555566789999999998764 4789999999999999999999997654321 111111111000000000
Q ss_pred CC------------CCc-c----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 878 PT------------PSR-D----VTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 878 ~~------------~~~-~----~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
+. ... . .......+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 238 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 000 0 0112357889999999999999999999986
No 166
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=9.9e-39 Score=353.85 Aligned_cols=263 Identities=17% Similarity=0.260 Sum_probs=199.0
Q ss_pred HhcCCCCceeeccccceEEEEEEeCC------CCEEEEEEcccccccC-------CCCChHHHHHHHHHHhhccCCceee
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELPS------GNIFAVKKFKAELFSD-------ETANPSEFLNEVLALTEIRHRNIIK 710 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~ 710 (918)
..++|.+.+.||+|+||.||+|.... ++.||||++....... .......+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 45689999999999999999997654 4789999976431100 0001123445566677778999999
Q ss_pred EecccccC----CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeC
Q 044366 711 FHGFCSNA----QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLD 786 (918)
Q Consensus 711 ~~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 786 (918)
+++++... ...++||||+ +++|.+++... ...+++.+++.|+.||+.||+|||+. +|+||||||+||+++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 99998654 4589999999 89999999764 34589999999999999999999999 999999999999999
Q ss_pred --CCCcEEEeccccccccCCCCCC-------ceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchh
Q 044366 787 --SEYEAHVSDFGFAKFLEPHSSN-------WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVST 857 (918)
Q Consensus 787 --~~~~~kl~DfG~~~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~ 857 (918)
.++.+||+|||+++.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 8899999999999876543221 1334599999999999999999999999999999999999999874322
Q ss_pred hhhhhhhhH----hhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 858 IFSSISNMI----IEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 858 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
......... .......+..++.. .....+.+++..||+.||++||+++++++.|+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 267 DPKYVRDSKIRYRENIASLMDKCFPAA-----NAPGEIAKYMETVKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHSCTT-----CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhhHHHHHHHhcccc-----cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 111111111 11122222222111 11246888999999999999999999999885
No 167
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.7e-38 Score=364.55 Aligned_cols=256 Identities=22% Similarity=0.304 Sum_probs=207.4
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|+. .+|+.||+|++...... .......+.+|+++++.++||||+++++++.+.+..++
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh-hhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 46788999999999999999965 47999999998764322 22346778999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.+++.... ...+++..++.++.||+.||+|||+. +||||||||+||+++.++.+||+|||++....
T Consensus 262 VmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 999999999999997653 33489999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcc
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRD 883 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (918)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... ..+..........
T Consensus 338 ~~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~~~i~----~~i~~~~~~~p~~ 411 (576)
T 2acx_A 338 EGQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVE----RLVKEVPEEYSER 411 (576)
T ss_dssp TTC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-HHHHH----HHHHHCCCCCCTT
T ss_pred cCc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-HHHHH----HHhhcccccCCcc
Confidence 433 33446899999999999998999999999999999999999999875432100 00011 1111111111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 044366 884 VTDKLRSIMEVAILCLVENPEARP-----TMKEVCN 914 (918)
Q Consensus 884 ~~~~~~~l~~li~~cl~~dp~~RP-----t~~evl~ 914 (918)
....+.+++.+||+.||++|| +++|+++
T Consensus 412 ---~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 412 ---FSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ---CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 224678899999999999999 7888864
No 168
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.2e-38 Score=347.25 Aligned_cols=263 Identities=23% Similarity=0.328 Sum_probs=206.6
Q ss_pred CHHHHHHHhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhh--ccCCceeeEecc
Q 044366 637 LYEEITKATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTE--IRHRNIIKFHGF 714 (918)
Q Consensus 637 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~ 714 (918)
.........++|...+.||+|+||.||+|+. +|+.||||++... ....+.+|++++.. ++||||++++++
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~ni~~~~~~ 104 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAA 104 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHSCCCCTTBCCEEEE
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-------hHHHHHHHHHHHHHhhcCCCcEEEEEee
Confidence 3444456678899999999999999999987 5899999998542 24678889998887 789999999999
Q ss_pred cccCC----ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEcCCCCCC
Q 044366 715 CSNAQ----HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLH--------HDCIPPIVHRDISSKN 782 (918)
Q Consensus 715 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~dlk~~N 782 (918)
+.... ..++||||+++|+|.+++... .+++.+++.++.|++.||+||| +. +|+||||||+|
T Consensus 105 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~N 177 (342)
T 1b6c_B 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKN 177 (342)
T ss_dssp EECCCSSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGG
T ss_pred ecccCCccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHH
Confidence 87765 789999999999999999753 4899999999999999999999 77 99999999999
Q ss_pred eeeCCCCcEEEeccccccccCCCCCC----ceecccccccccccccccC------CCCcccchhhHHHHHHHHHhC----
Q 044366 783 VLLDSEYEAHVSDFGFAKFLEPHSSN----WTEFAGTVGYAAPELAYTM------RATEKYDVYSFGVLALEVIKG---- 848 (918)
Q Consensus 783 ill~~~~~~kl~DfG~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~vl~el~tg---- 848 (918)
|+++.++.+||+|||++......... .....||+.|+|||++.+. .++.++||||||+++|||++|
T Consensus 178 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~ 257 (342)
T 1b6c_B 178 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 257 (342)
T ss_dssp EEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred EEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcC
Confidence 99999999999999999877554322 2345789999999998765 234689999999999999999
Q ss_pred ------CCCCCcchhhhhhhhhhHhhhhhhcccCC-CCCCc--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 849 ------YHPGDFVSTIFSSISNMIIEVNQILDHRL-PTPSR--DVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 849 ------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
..||............... ....... +.... ...+....+.+++.+||+.||++|||+.||++.|+
T Consensus 258 ~~~~~~~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 258 GIHEDYQLPYYDLVPSDPSVEEMRK---VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp TBCCCCCCTTTTTSCSSCCHHHHHH---HHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred CcccccccCccccCcCcccHHHHHH---HHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 6676433211111111111 1111111 11111 12345567999999999999999999999999986
No 169
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.5e-38 Score=349.96 Aligned_cols=263 Identities=25% Similarity=0.387 Sum_probs=208.9
Q ss_pred CHHHHHHHhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCC----CCChHHHHHHHHHHhhc-cCCceee
Q 044366 637 LYEEITKATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDE----TANPSEFLNEVLALTEI-RHRNIIK 710 (918)
Q Consensus 637 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~ 710 (918)
.+.......++|.+.+.||+|+||.||+|... +|+.||||+++....... ....+.+.+|+++++.+ +||||++
T Consensus 85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 164 (365)
T 2y7j_A 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164 (365)
T ss_dssp HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 34455666788999999999999999999764 799999999865321111 11135688999999999 7999999
Q ss_pred EecccccCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCc
Q 044366 711 FHGFCSNAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYE 790 (918)
Q Consensus 711 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 790 (918)
+++++...+..++||||+++|+|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.
T Consensus 165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 165 LIDSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 999999999999999999999999999754 3489999999999999999999999 9999999999999999999
Q ss_pred EEEeccccccccCCCCCCceeccccccccccccccc------CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhh
Q 044366 791 AHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYT------MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISN 864 (918)
Q Consensus 791 ~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~ 864 (918)
+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...
T Consensus 239 ikl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~-- 314 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-LML-- 314 (365)
T ss_dssp EEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHH--
T ss_pred EEEEecCcccccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-HHH--
Confidence 9999999998776433 2345678999999998864 35788999999999999999999998654321 000
Q ss_pred hHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 865 MIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..+..................+.+++.+||+.||++|||++|+++
T Consensus 315 -----~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 315 -----RMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp -----HHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -----HHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111111111111122356889999999999999999999986
No 170
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.1e-38 Score=359.41 Aligned_cols=257 Identities=21% Similarity=0.275 Sum_probs=194.9
Q ss_pred hcCCCCceeeccccceEEEEEE-eCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccC-----
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAE-LPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNA----- 718 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 718 (918)
.++|...+.||+|+||.||+|. ..+|+.||||++..... .....+.+.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcccc--ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 4789999999999999999995 45799999999875421 223356789999999999999999999998554
Q ss_pred -CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccc
Q 044366 719 -QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFG 797 (918)
Q Consensus 719 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 797 (918)
...++||||+++ ++.+.+.. .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 356999999986 56666643 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHh----------
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMII---------- 867 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~---------- 867 (918)
+++..... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... .+.....
T Consensus 210 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~~~~ 287 (464)
T 3ttj_A 210 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFM 287 (464)
T ss_dssp CC-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHH
T ss_pred eeeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHH
Confidence 99876543 23355689999999999999999999999999999999999999987543211 1111000
Q ss_pred -----hhhhhcccCCC----------------CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 868 -----EVNQILDHRLP----------------TPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 868 -----~~~~~~~~~~~----------------~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
........... ............+.+++.+||+.||++|||++|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp TTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00011111100 001111122467899999999999999999999985
No 171
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.9e-38 Score=361.27 Aligned_cols=256 Identities=20% Similarity=0.303 Sum_probs=207.6
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
++|...+.||+|+||.||+|+. .+|+.||+|++....... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~-~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK-RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh-hHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 5788889999999999999976 479999999997643322 23467899999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 725 CEYLARGSLTTILRDDAA-AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
|||+++|+|.+++..... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999976432 34589999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcc
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRD 883 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (918)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... ..+.......+ ..
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~~~~---~~i~~~~~~~p-~~ 415 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELK---QRVLEQAVTYP-DK 415 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HHHHH---HHHHHCCCCCC-TT
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HHHHH---HHHhhcccCCC-cc
Confidence 554444556899999999999999999999999999999999999999875422100 00111 11111111111 11
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCH-----HHHH
Q 044366 884 VTDKLRSIMEVAILCLVENPEARPTM-----KEVC 913 (918)
Q Consensus 884 ~~~~~~~l~~li~~cl~~dp~~RPt~-----~evl 913 (918)
....+.+++.+||+.||++||++ ++++
T Consensus 416 ---~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~ 447 (543)
T 3c4z_A 416 ---FSPASKDFCEALLQKDPEKRLGFRDGSCDGLR 447 (543)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHH
T ss_pred ---cCHHHHHHHHHhccCCHhHCCCCcccCHHHHH
Confidence 22467888999999999999965 5665
No 172
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.9e-38 Score=339.57 Aligned_cols=252 Identities=23% Similarity=0.385 Sum_probs=207.6
Q ss_pred HhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
..++|...+.||+|+||.||+|... +++.||+|++...... .....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 91 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhcc-CHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence 3467889999999999999999654 6889999998764322 2223567899999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+||||+++++|.+++... ..+++.+++.++.|+++||+|||+. +++||||||+||+++.++.+||+|||.+...
T Consensus 92 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 92 VVLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EEEECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 999999999999998764 3489999999999999999999999 9999999999999999999999999999887
Q ss_pred CCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCc
Q 044366 803 EPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSR 882 (918)
Q Consensus 803 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (918)
...........|++.|+|||++.+..++.++||||+|+++|+|++|+.||+...... . .. .........+ .
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~----~~---~~~~~~~~~~-~ 236 (294)
T 2rku_A 166 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-T----YL---RIKKNEYSIP-K 236 (294)
T ss_dssp CSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-H----HH---HHHTTCCCCC-T
T ss_pred ccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-H----HH---HHhhccCCCc-c
Confidence 655444555678999999999999889999999999999999999999987543211 0 11 1111111111 1
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 883 DVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 883 ~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
. ....+.+++.+||+.||++|||++|+++
T Consensus 237 ~---~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 237 H---INPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp T---SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred c---cCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 1 1245788999999999999999999875
No 173
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.5e-38 Score=348.91 Aligned_cols=247 Identities=26% Similarity=0.396 Sum_probs=198.8
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
..|...+.||+|+||.||+|+. .+|+.||||++...... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEcccccc-chHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 4588889999999999999964 68999999998653211 112245789999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
|||++ |++.+++... ...+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....+
T Consensus 133 ~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99997 5888888643 24589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceecccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCC-C
Q 044366 805 HSSNWTEFAGTVGYAAPELAY---TMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPT-P 880 (918)
Q Consensus 805 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 880 (918)
. ....||+.|+|||++. +..++.++|||||||++|||++|+.||....... .. ..+.....+. .
T Consensus 207 ~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~-------~~~~~~~~~~~~ 274 (348)
T 1u5q_A 207 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-AL-------YHIAQNESPALQ 274 (348)
T ss_dssp B----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HH-------HHHHHSCCCCCC
T ss_pred C----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HH-------HHHHhcCCCCCC
Confidence 3 3357899999999884 5678999999999999999999999976543211 11 1111111111 1
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.... ...+.+++.+||+.||++|||++++++
T Consensus 275 ~~~~---~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 275 SGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp CTTS---CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCC---CHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 1112 245788999999999999999999975
No 174
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.7e-38 Score=343.55 Aligned_cols=257 Identities=24% Similarity=0.369 Sum_probs=202.9
Q ss_pred CCCceeeccccceEEEEEEeC-----CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc--CCc
Q 044366 648 FGEKYCIGKGGQRSVYKAELP-----SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN--AQH 720 (918)
Q Consensus 648 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~ 720 (918)
|...+.||+|+||.||+|.+. +|+.||||+++... .....+.+.+|+++++.++||||+++++++.+ ...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA---GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc---ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 488899999999999988542 68899999987531 22235679999999999999999999999976 467
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
.++||||+++|+|.+++... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccc
Confidence 89999999999999999764 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhh------hhHhhhhh
Q 044366 801 FLEPHSSN---WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSIS------NMIIEVNQ 871 (918)
Q Consensus 801 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~------~~~~~~~~ 871 (918)
........ .....++..|+|||++.+..++.++||||+|+++|||++|+.||........... .......+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE 262 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence 87654321 2334578889999999998899999999999999999999999765432111000 00011111
Q ss_pred hcccC-CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 872 ILDHR-LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 872 ~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
..... ...... .....+.+++.+||+.||++|||++|+++.|+
T Consensus 263 ~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 263 LLERGERLPRPD---KCPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp HHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcccCCCCCc---cccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111 111111 22356888999999999999999999999886
No 175
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=349.69 Aligned_cols=262 Identities=18% Similarity=0.191 Sum_probs=197.1
Q ss_pred hcCCCCceeeccccceEEEEEEeC----CCCEEEEEEcccccccC-------CCCChHHHHHHHHHHhhccCCceeeEec
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP----SGNIFAVKKFKAELFSD-------ETANPSEFLNEVLALTEIRHRNIIKFHG 713 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~~~~ 713 (918)
.++|...+.||+|+||.||+|... ++..||||++....... .......+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467899999999999999999764 67889999986531100 0012245778888999999999999999
Q ss_pred cccc----CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC
Q 044366 714 FCSN----AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY 789 (918)
Q Consensus 714 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 789 (918)
++.. ....++||||+ +++|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 9877 67899999999 899999997653 589999999999999999999999 999999999999998887
Q ss_pred --cEEEeccccccccCCCCC-------CceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhh
Q 044366 790 --EAHVSDFGFAKFLEPHSS-------NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFS 860 (918)
Q Consensus 790 --~~kl~DfG~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~ 860 (918)
.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 999999999987643221 12345789999999999999999999999999999999999999854221111
Q ss_pred hhhhhHhhhhhhcc----cCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 861 SISNMIIEVNQILD----HRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 861 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
.............. ...+ .. .....+.+++.+||+.||++|||+++|++.|++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 325 (345)
T 2v62_A 269 AVQTAKTNLLDELPQSVLKWAP--SG---SSCCEIAQFLVCAHSLAYDEKPNYQALKKILNP 325 (345)
T ss_dssp HHHHHHHHHHHTTTHHHHHHSC--TT---SCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCT
T ss_pred HHHHHHHhhcccccHHHHhhcc--cc---ccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 11111111100000 0000 00 122468889999999999999999999999864
No 176
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2e-38 Score=344.72 Aligned_cols=259 Identities=20% Similarity=0.311 Sum_probs=196.5
Q ss_pred cCCCCc-eeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCCceE
Q 044366 646 GNFGEK-YCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 646 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 722 (918)
+.|.+. +.||+|+||.||+|.. .+++.||||++... .....+.+.+|+++++++ +||||+++++++.+++..+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ----PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC----SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC----cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 456663 6799999999999964 57999999998653 234467899999999885 7999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCc---EEEeccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYE---AHVSDFGFA 799 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~DfG~~ 799 (918)
+||||+++|+|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 88 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 9999999999999997643 489999999999999999999999 9999999999999998776 999999999
Q ss_pred cccCCCCC-------Cceeccccccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhh----
Q 044366 800 KFLEPHSS-------NWTEFAGTVGYAAPELAYT-----MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSIS---- 863 (918)
Q Consensus 800 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~---- 863 (918)
........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 241 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence 86643211 1223468999999999875 5578899999999999999999999865422100000
Q ss_pred --h-hHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 864 --N-MIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 864 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
. .......+.......+..........+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred chhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 0 00001111112221111111122356889999999999999999999986
No 177
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.8e-38 Score=346.68 Aligned_cols=261 Identities=23% Similarity=0.339 Sum_probs=205.7
Q ss_pred hcCCCCceeeccccceEEEEEEe-----CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccc--c
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-----PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCS--N 717 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~ 717 (918)
.++|...+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+++++.++||||+++++++. +
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 97 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG 97 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC
Confidence 36788899999999999999973 46889999998653 2223467999999999999999999999875 4
Q ss_pred CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccc
Q 044366 718 AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFG 797 (918)
Q Consensus 718 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 797 (918)
....++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 172 (327)
T 3lxl_A 98 RQSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFG 172 (327)
T ss_dssp SCEEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGG
T ss_pred CceEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccc
Confidence 567899999999999999997642 3489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCC---ceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhh------hhHhh
Q 044366 798 FAKFLEPHSSN---WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSIS------NMIIE 868 (918)
Q Consensus 798 ~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~------~~~~~ 868 (918)
++......... .....|+..|+|||++.+..++.++||||||+++|+|++|+.||........... .....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 252 (327)
T 3lxl_A 173 LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR 252 (327)
T ss_dssp GCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHH
T ss_pred cceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHH
Confidence 99877544321 2334578889999999998899999999999999999999999754332110000 00011
Q ss_pred hhhhc-ccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 869 VNQIL-DHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 869 ~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
..+.. ......... .....+.+++.+||+.||++|||++|+++.|+
T Consensus 253 ~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 253 LLELLEEGQRLPAPP---ACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp HHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhhcccCCCCCC---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111 111111111 22346888999999999999999999999886
No 178
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.2e-38 Score=351.95 Aligned_cols=249 Identities=22% Similarity=0.331 Sum_probs=196.4
Q ss_pred cCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc--CCceeeEecccccCCceEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR--HRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~l 723 (918)
.+|.+.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+++++.++ ||||+++++++..++..++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc--cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 45899999999999999999887899999999865321 2223577999999999996 5999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||| +.+++|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++.+.
T Consensus 134 v~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EEE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred EEe-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 999 56789999998653 589999999999999999999999 999999999999996 5799999999998775
Q ss_pred CCCC--Cceeccccccccccccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhh
Q 044366 804 PHSS--NWTEFAGTVGYAAPELAYT-----------MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVN 870 (918)
Q Consensus 804 ~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~ 870 (918)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ..
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~-------~~ 278 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-------LH 278 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-------HH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH-------HH
Confidence 4332 1244679999999999865 36889999999999999999999998643221111 11
Q ss_pred hhcccCCCC-CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 871 QILDHRLPT-PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 871 ~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.+.+..... .+... ...+.+++.+||+.||++|||+.|+++
T Consensus 279 ~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 279 AIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp HHHCTTSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhCccccCCCCccc---hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 222221111 11111 245788999999999999999999985
No 179
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.5e-38 Score=347.26 Aligned_cols=263 Identities=19% Similarity=0.265 Sum_probs=194.4
Q ss_pred HHHhcCCCCceeeccccceEEEEEE-eCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCc
Q 044366 642 TKATGNFGEKYCIGKGGQRSVYKAE-LPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 642 ~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 720 (918)
....++|...+.||+|+||.||+|. ..+|+.||||+++.... .....+.+.+|+++++.++||||+++++++.+++.
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR 107 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETTE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc--ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCE
Confidence 3456789999999999999999995 45799999999975422 22234567899999999999999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeC-----CCCcEEEec
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLD-----SEYEAHVSD 795 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-----~~~~~kl~D 795 (918)
.++||||+++ +|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++ .++.+||+|
T Consensus 108 ~~lv~e~~~~-~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~D 180 (329)
T 3gbz_A 108 LHLIFEYAEN-DLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGD 180 (329)
T ss_dssp EEEEEECCSE-EHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECC
T ss_pred EEEEEecCCC-CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECc
Confidence 9999999985 9999997653 489999999999999999999999 999999999999994 455699999
Q ss_pred cccccccCCCCCCceecccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhc-
Q 044366 796 FGFAKFLEPHSSNWTEFAGTVGYAAPELAYTM-RATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQIL- 873 (918)
Q Consensus 796 fG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~- 873 (918)
||+++.............||+.|+|||++.+. .++.++||||+||++|||++|+.||....... .............
T Consensus 181 fg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~ 259 (329)
T 3gbz_A 181 FGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDD 259 (329)
T ss_dssp TTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCT
T ss_pred CCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCch
Confidence 99998876554555566789999999999874 48999999999999999999999986543321 1111111000000
Q ss_pred ------------ccCCCCCCc-chHH-----HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 874 ------------DHRLPTPSR-DVTD-----KLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 874 ------------~~~~~~~~~-~~~~-----~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
....+.... .... ....+.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 260 TTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000011000 1111 1256789999999999999999999986
No 180
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-38 Score=351.89 Aligned_cols=252 Identities=27% Similarity=0.416 Sum_probs=189.6
Q ss_pred CCCCceeeccccceEEEEEEeC--CC--CEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccc-cCCce
Q 044366 647 NFGEKYCIGKGGQRSVYKAELP--SG--NIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCS-NAQHS 721 (918)
Q Consensus 647 ~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~ 721 (918)
.|...+.||+|+||.||+|... ++ ..||||.++.. ......+.|.+|+.++++++||||+++++++. .++..
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 166 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 166 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC---SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCe
Confidence 4566789999999999999653 22 36899988642 22334578999999999999999999999864 45678
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
++||||+++|+|.++++.. ...+++.+++.++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 167 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccc
Confidence 9999999999999999764 24578999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC----CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 802 LEPHSS----NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 802 ~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
+..... ......+++.|+|||++.+..++.++||||||+++|||++ |.+||...... .. . .. .....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~-~~-~---~~---~~~~~ 313 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DI-T---VY---LLQGR 313 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-CH-H---HH---HHTTC
T ss_pred ccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-HH-H---HH---HHcCC
Confidence 643321 1233456789999999999999999999999999999999 67776543221 00 0 01 11111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
....+... ...+.+++.+||+.||++|||++|+++.|+
T Consensus 314 ~~~~p~~~---~~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 314 RLLQPEYC---PDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp CCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111122 245788999999999999999999999885
No 181
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=345.06 Aligned_cols=253 Identities=22% Similarity=0.402 Sum_probs=195.8
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCE----EEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNI----FAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ 719 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 719 (918)
.++|...+.||+|+||.||+|.. .+++. ||+|.+... ......+.+.+|+.+++.++||||+++++++..+.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC---SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc---cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence 46789999999999999999964 45654 466665432 23445688999999999999999999999998755
Q ss_pred ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccc
Q 044366 720 HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFA 799 (918)
Q Consensus 720 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~ 799 (918)
.++|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a 164 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-
T ss_pred -ceEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcce
Confidence 789999999999999997653 4589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC--ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 800 KFLEPHSSN--WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 800 ~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
+........ .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||+..... .... .... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~---~~~~--~~~ 237 (327)
T 3lzb_A 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISS---ILEK--GER 237 (327)
T ss_dssp ---------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH---HHHT--TCC
T ss_pred eEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHH---HHHc--CCC
Confidence 876543322 233456789999999999999999999999999999999 99998654321 1111 1111 111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.+. ... ....+.+++.+||+.||.+|||+.|+++.|+
T Consensus 238 ~~~-~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 274 (327)
T 3lzb_A 238 LPQ-PPI---CTIDVYMIMRKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCC-CTT---BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC-Ccc---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 111 111 2245788999999999999999999999886
No 182
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=8.6e-39 Score=340.92 Aligned_cols=257 Identities=24% Similarity=0.346 Sum_probs=204.2
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccc--ccCCce
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFC--SNAQHS 721 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~--~~~~~~ 721 (918)
.++|...+.||+|+||.||+|.. .+|+.||+|++..... .....+.+.+|++++++++||||+++++++ ...+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence 46788999999999999999965 4799999999875322 122356799999999999999999999987 446788
Q ss_pred EEEEEeccCCChhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEcCCCCCCeeeCCCCcEEEec
Q 044366 722 FIVCEYLARGSLTTILRDDA-AAKEFSWNQRMNVIKGVANALSYLHHDCIPP-----IVHRDISSKNVLLDSEYEAHVSD 795 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~dlk~~Nill~~~~~~kl~D 795 (918)
++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+. + ++||||||+||+++.++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEec
Confidence 99999999999999997643 234589999999999999999999998 7 99999999999999999999999
Q ss_pred cccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhccc
Q 044366 796 FGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDH 875 (918)
Q Consensus 796 fG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 875 (918)
||.+..............|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .. .. .+...
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~---~~---~i~~~ 231 (279)
T 2w5a_A 160 FGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--EL---AG---KIREG 231 (279)
T ss_dssp CCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH---HH---HHHHT
T ss_pred CchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HH---HH---HHhhc
Confidence 999987765433334457899999999999989999999999999999999999998754321 11 11 11111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 876 RLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 876 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
..+..... ....+.+++.+||+.||++|||++|+++.+.
T Consensus 232 ~~~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 232 KFRRIPYR---YSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CCCCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ccccCCcc---cCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 12111112 2246888999999999999999999997653
No 183
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.4e-38 Score=345.23 Aligned_cols=265 Identities=22% Similarity=0.321 Sum_probs=207.8
Q ss_pred ccCHHHHHHHhcCCCCc-eeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeE
Q 044366 635 KVLYEEITKATGNFGEK-YCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKF 711 (918)
Q Consensus 635 ~~~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~ 711 (918)
.+.+...+...++|... +.||+|+||.||+|.. .+|+.||+|+++.... .......+.+|+.+++.+ +||||+++
T Consensus 17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~iv~~ 94 (327)
T 3lm5_A 17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR--GQDCRAEILHEIAVLELAKSCPRVINL 94 (327)
T ss_dssp CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET--TEECHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHHhccCCCCEEEE
Confidence 34445556667778777 8899999999999965 4799999999876432 223467899999999999 46999999
Q ss_pred ecccccCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC---C
Q 044366 712 HGFCSNAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS---E 788 (918)
Q Consensus 712 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~ 788 (918)
++++.+.+..++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++. +
T Consensus 95 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~ 170 (327)
T 3lm5_A 95 HEVYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPL 170 (327)
T ss_dssp EEEEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTB
T ss_pred EEEEEeCCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCC
Confidence 999999999999999999999999986542 34589999999999999999999999 9999999999999998 7
Q ss_pred CcEEEeccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhh
Q 044366 789 YEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIE 868 (918)
Q Consensus 789 ~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~ 868 (918)
+.+||+|||++....... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ....
T Consensus 171 ~~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----~~~~ 244 (327)
T 3lm5_A 171 GDIKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-----TYLN 244 (327)
T ss_dssp CCEEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHHH
T ss_pred CcEEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-----HHHH
Confidence 899999999998775432 2344678999999999999999999999999999999999999986543211 1111
Q ss_pred hhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 869 VNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.... ...............+.+++.+||+.||++|||++|+++
T Consensus 245 i~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 245 ISQV---NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHHT---CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHhc---ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 1111 111111111223356888999999999999999999975
No 184
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=356.31 Aligned_cols=320 Identities=23% Similarity=0.234 Sum_probs=175.7
Q ss_pred ceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccc
Q 044366 144 DTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHIN 223 (918)
Q Consensus 144 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n 223 (918)
+.++.++++++.+ |..+. ++++.|+|++|+++++.+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~i-p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFVAV-PEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCSSC-CSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCcC-CCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 3455566666533 33322 35666666666666655556666666666666666666555566666666666666666
Q ss_pred cccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCc
Q 044366 224 QLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPK 303 (918)
Q Consensus 224 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 303 (918)
+++.+.+..|.++++|++|+|++|++.+..+..|..+++|++|++++|.+.+..+..|.++++|+.|++++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 66655545555666666666666666555555555555566555555555555555555555555555555555544444
Q ss_pred cccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCC
Q 044366 304 SLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKL 383 (918)
Q Consensus 304 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L 383 (918)
.+.++++|+.|++++|.+..+....|..+++|+.|++++|+ ..+.++..+....+|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~------------------------~~~~~~~~~~~~~~L 226 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWP------------------------YLDTMTPNCLYGLNL 226 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCT------------------------TCCEECTTTTTTCCC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCc------------------------cccccCcccccCccc
Confidence 45555555555555555544444444444444444444433 333344444444466
Q ss_pred cEEEccCceeccccccchhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCc
Q 044366 384 QVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNN 463 (918)
Q Consensus 384 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 463 (918)
+.|+|++|+|+...+..+..+++|+.|+|++|++++..+..|..+++|++|+|++|.+++..|..|..+++|+.|+|++|
T Consensus 227 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 227 TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 66666666666444445555555555555555555555555555555555555555555555555555555555555555
Q ss_pred ccCCCCchhhccccccceEeccCCcCC
Q 044366 464 QFSHKIPTEFEKLIHLSELDLSHNILQ 490 (918)
Q Consensus 464 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 490 (918)
+|++..+..|..+++|+.|+|++|.++
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred cCceeCHhHcCCCcccCEEEccCCCcc
Confidence 555444444555555555555555554
No 185
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-38 Score=344.08 Aligned_cols=253 Identities=28% Similarity=0.438 Sum_probs=196.5
Q ss_pred cCCCCceeeccccceEEEEEEeCC-----CCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCc
Q 044366 646 GNFGEKYCIGKGGQRSVYKAELPS-----GNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 720 (918)
.+|...+.||+|+||.||+|.... +..||||+++... .......+.+|+++++.++||||+++++++.+.+.
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 466778899999999999996532 2359999986532 22234578999999999999999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
.++||||+++|+|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcch
Confidence 99999999999999999764 24589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 801 FLEPHSSN---WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 801 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... . ... .+....
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~---~~~---~~~~~~ 267 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--E---VMK---AINDGF 267 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--H---HHH---HHHTTC
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--H---HHH---HHHCCC
Confidence 76543221 123345788999999998899999999999999999999 99998643321 0 111 111111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
....... ....+.+++.+||+.||++||+++|+++.|+
T Consensus 268 ~~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 305 (333)
T 1mqb_A 268 RLPTPMD---CPSAIYQLMMQCWQQERARRPKFADIVSILD 305 (333)
T ss_dssp CCCCCTT---CBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred cCCCccc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111 2346788999999999999999999999885
No 186
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.1e-38 Score=356.98 Aligned_cols=257 Identities=24% Similarity=0.302 Sum_probs=193.9
Q ss_pred HHhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCC----CCChHHHHHHHHHHhhccCCceeeEeccccc
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDE----TANPSEFLNEVLALTEIRHRNIIKFHGFCSN 717 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 717 (918)
...++|...+.||+|+||.||+|.. .+++.||||++........ ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 4567899999999999999999954 5789999999876432211 1123458899999999999999999999754
Q ss_pred CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC---cEEEe
Q 044366 718 AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY---EAHVS 794 (918)
Q Consensus 718 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~ 794 (918)
+..++||||+++|+|.+++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred -CceEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 4579999999999999998754 3489999999999999999999999 999999999999997544 59999
Q ss_pred ccccccccCCCCCCceeccccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhh
Q 044366 795 DFGFAKFLEPHSSNWTEFAGTVGYAAPELAYT---MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQ 871 (918)
Q Consensus 795 DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 871 (918)
|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........... .
T Consensus 285 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~-------~ 356 (419)
T 3i6u_A 285 DFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD-------Q 356 (419)
T ss_dssp CSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHH-------H
T ss_pred ecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHH-------H
Confidence 99999876543 23345678999999999853 5678899999999999999999999865332111111 0
Q ss_pred hcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 872 ILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
+..................+.+++.+||+.||++|||++|+++
T Consensus 357 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 357 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1111111111111122356889999999999999999999986
No 187
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.2e-38 Score=340.46 Aligned_cols=252 Identities=25% Similarity=0.389 Sum_probs=201.6
Q ss_pred HHhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCce
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 721 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 721 (918)
...++|...+.||+|+||.||+|... +|+.||||.+... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE------SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDL 99 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT------SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch------HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEE
Confidence 45578999999999999999999654 6999999998652 2357899999999999999999999999999999
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
++||||+++|+|.+++... ...+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+..
T Consensus 100 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 174 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQ 174 (314)
T ss_dssp EEEEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchh
Confidence 9999999999999999743 34589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 802 LEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 802 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
............|++.|+|||.+.+..++.++||||||+++|+|++|+.||......... ...........
T Consensus 175 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~---- 245 (314)
T 3com_A 175 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI-----FMIPTNPPPTF---- 245 (314)
T ss_dssp CBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HHHHHSCCCCC----
T ss_pred hhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH-----HHHhcCCCccc----
Confidence 765544445567899999999999989999999999999999999999998654321110 01111111111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.........+.+++.+||+.||.+|||+.++++
T Consensus 246 ~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 111112356889999999999999999999975
No 188
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.6e-38 Score=348.42 Aligned_cols=263 Identities=22% Similarity=0.261 Sum_probs=204.9
Q ss_pred HHHHHHHhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc-----CCceeeE
Q 044366 638 YEEITKATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR-----HRNIIKF 711 (918)
Q Consensus 638 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~ 711 (918)
+.+.....++|.+.+.||+|+||.||+|+. .+++.||||+++.. ......+..|+++++.++ ||||+++
T Consensus 27 ~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 27 WKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-----KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp CCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-----hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 334445568899999999999999999965 57899999998642 122456788999999986 9999999
Q ss_pred ecccccCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC----
Q 044366 712 HGFCSNAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS---- 787 (918)
Q Consensus 712 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---- 787 (918)
++++...+..++||||+ +++|.+++.... ...+++.+++.++.||+.||+|||+. +|+||||||+||+++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCC
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccccc
Confidence 99999999999999999 889999998654 23489999999999999999999999 9999999999999975
Q ss_pred ---------------------CCcEEEeccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHH
Q 044366 788 ---------------------EYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVI 846 (918)
Q Consensus 788 ---------------------~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~ 846 (918)
++.+||+|||++....... ....||+.|+|||++.+..++.++||||+||++|||+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 253 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH---GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC---CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCCC---cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence 7889999999998754322 3457899999999999999999999999999999999
Q ss_pred hCCCCCCcchhhhhhhhhhHhh-----------h-----h-----hhcccCCCCCCcchHH--------------HHHHH
Q 044366 847 KGYHPGDFVSTIFSSISNMIIE-----------V-----N-----QILDHRLPTPSRDVTD--------------KLRSI 891 (918)
Q Consensus 847 tg~~p~~~~~~~~~~~~~~~~~-----------~-----~-----~~~~~~~~~~~~~~~~--------------~~~~l 891 (918)
+|+.||....... ........ . . ......++........ ....+
T Consensus 254 ~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (360)
T 3llt_A 254 TGSLLFRTHEHME-HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELF 332 (360)
T ss_dssp HSSCSCCCSSHHH-HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHH
T ss_pred HCCCCCCCCcHHH-HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHH
Confidence 9999986543211 11000000 0 0 0000011111111110 01467
Q ss_pred HHHHHHcccCCCCCCCCHHHHHH
Q 044366 892 MEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 892 ~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.+++.+||+.||++|||++|+++
T Consensus 333 ~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 333 CDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHhcCChhhCCCHHHHhc
Confidence 79999999999999999999975
No 189
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=7.3e-38 Score=333.15 Aligned_cols=252 Identities=24% Similarity=0.331 Sum_probs=203.6
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG---CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc---chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEE
Confidence 467889999999999999999654 79999999986532 22335789999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++++|.+++... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+....
T Consensus 83 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 83 FLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp EEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 99999999999998754 3489999999999999999999999 99999999999999999999999999998664
Q ss_pred CCC--CCceecccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC
Q 044366 804 PHS--SNWTEFAGTVGYAAPELAYTMRA-TEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP 880 (918)
Q Consensus 804 ~~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (918)
... .......|++.|+|||++.+..+ +.++||||||+++|||++|+.||+........... ... .....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~---~~~~~- 228 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD----WKE---KKTYL- 228 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHH----HHT---TCTTS-
T ss_pred CCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHH----hhh---ccccc-
Confidence 322 22344578999999999987665 77999999999999999999998754322111111 000 00000
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.........+.+++.+||+.||++|||++|+++
T Consensus 229 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 -NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 011122346788999999999999999999975
No 190
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.3e-38 Score=345.33 Aligned_cols=252 Identities=22% Similarity=0.388 Sum_probs=207.5
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
..++|...+.||+|+||.||+|.. .+++.||+|++...... .....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 117 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 117 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence 346788999999999999999965 46889999998764322 2223567899999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+||||+++++|.+++... ..+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 118 lv~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 118 VVLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp EEECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 999999999999998764 3489999999999999999999999 9999999999999999999999999999887
Q ss_pred CCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCc
Q 044366 803 EPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSR 882 (918)
Q Consensus 803 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (918)
...........|++.|+|||++.+..++.++||||||+++|||++|+.||....... . .... .......+ .
T Consensus 192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~----~~~~---~~~~~~~~-~ 262 (335)
T 2owb_A 192 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-T----YLRI---KKNEYSIP-K 262 (335)
T ss_dssp CSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-H----HHHH---HHTCCCCC-T
T ss_pred ccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-H----HHHH---hcCCCCCC-c
Confidence 655444555678999999999999889999999999999999999999987543211 1 1111 11111111 1
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 883 DVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 883 ~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.. ...+.+++.+||+.||++|||++|+++
T Consensus 263 ~~---~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 263 HI---NPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cC---CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 245788999999999999999999875
No 191
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.7e-38 Score=361.45 Aligned_cols=253 Identities=24% Similarity=0.338 Sum_probs=205.1
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
..++|.+.+.||+|+||.||+|.. .+|+.||||++..... .......+.+|++++++++||||+++++++.+.+..+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 97 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA--KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHH--BCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEE
Confidence 346799999999999999999965 4799999999875432 2234678999999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeC---CCCcEEEeccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLD---SEYEAHVSDFGFA 799 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~DfG~~ 799 (918)
+||||+++|+|.+++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 171 (486)
T 3mwu_A 98 IVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (486)
T ss_dssp EEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred EEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence 999999999999988764 3489999999999999999999999 999999999999995 4567999999999
Q ss_pred cccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCC
Q 044366 800 KFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPT 879 (918)
Q Consensus 800 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (918)
+...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .. ...+.......
T Consensus 172 ~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~-------~~~i~~~~~~~ 241 (486)
T 3mwu_A 172 TCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DI-------LKRVETGKYAF 241 (486)
T ss_dssp TTBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HH-------HHHHHHTCCCS
T ss_pred eECCCCC-ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HH-------HHHHHhCCCCC
Confidence 8765432 3345679999999999876 5899999999999999999999998654321 11 11111122222
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 880 PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 880 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
...........+.+++.+||+.||.+|||+.|+++
T Consensus 242 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 242 DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp CSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 22222333456889999999999999999999986
No 192
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.7e-38 Score=343.71 Aligned_cols=264 Identities=21% Similarity=0.313 Sum_probs=208.7
Q ss_pred HHHHHHHhcCCCCceeeccccceEEEEEEe------CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceee
Q 044366 638 YEEITKATGNFGEKYCIGKGGQRSVYKAEL------PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIK 710 (918)
Q Consensus 638 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~ 710 (918)
........++|...+.||+|+||.||+|.. .+++.||||+++... .....+.+.+|+.+++++ +||||++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC---CcHHHHHHHHHHHHHHhcccCCCeee
Confidence 445555678999999999999999999963 356899999986532 122346789999999999 7999999
Q ss_pred EecccccCC-ceEEEEEeccCCChhHHhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEc
Q 044366 711 FHGFCSNAQ-HSFIVCEYLARGSLTTILRDDAA-------------AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHR 776 (918)
Q Consensus 711 ~~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 776 (918)
+++++...+ ..++||||+++|+|.+++..... ...+++.+++.++.|+++||+|||+. +|+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence 999987654 58999999999999999986532 12378999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCcEEEeccccccccCCCCCC--ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCC
Q 044366 777 DISSKNVLLDSEYEAHVSDFGFAKFLEPHSSN--WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGD 853 (918)
Q Consensus 777 dlk~~Nill~~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~ 853 (918)
||||+||+++.++.+||+|||+++........ .....||+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999876544332 223457889999999999999999999999999999998 999986
Q ss_pred cchhhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 854 FVSTIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
......... ..... ......... ....+.+++.+||+.||.+|||++|+++.|+
T Consensus 253 ~~~~~~~~~----~~~~~---~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 253 GVKIDEEFC----RRLKE---GTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp TCCCSHHHH----HHHHH---TCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccchhHHHH----HHhcc---CccCCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 543211111 11111 111111111 2246888999999999999999999999885
No 193
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.3e-38 Score=352.85 Aligned_cols=261 Identities=22% Similarity=0.361 Sum_probs=190.4
Q ss_pred HHhcCCCCceeeccccceEEEEEE-eCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc-CCceeeEecccccC--
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAE-LPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR-HRNIIKFHGFCSNA-- 718 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~-- 718 (918)
...++|...+.||+|+||.||+|. ..+|+.||||++.... ........+.+|+.+++.+. ||||+++++++..+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF--QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC----CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc--cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence 456789999999999999999995 4579999999986532 12233567889999999997 99999999998644
Q ss_pred CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccc
Q 044366 719 QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGF 798 (918)
Q Consensus 719 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 798 (918)
...++||||++ |+|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 155 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGL 155 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence 47899999998 5899998753 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC---------------------CCCceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcch
Q 044366 799 AKFLEPH---------------------SSNWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVS 856 (918)
Q Consensus 799 ~~~~~~~---------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~ 856 (918)
|+.+... .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9876431 112234579999999999876 678999999999999999999999986543
Q ss_pred hhhhhhhhhHhhh-----------------------hhhcccCCCCCCcchH-------------HHHHHHHHHHHHccc
Q 044366 857 TIFSSISNMIIEV-----------------------NQILDHRLPTPSRDVT-------------DKLRSIMEVAILCLV 900 (918)
Q Consensus 857 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~-------------~~~~~l~~li~~cl~ 900 (918)
... ......... ................ .....+.+++.+||+
T Consensus 236 ~~~-~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~ 314 (388)
T 3oz6_A 236 TMN-QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ 314 (388)
T ss_dssp HHH-HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCC
T ss_pred HHH-HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhc
Confidence 211 111100000 0000000000000011 112468899999999
Q ss_pred CCCCCCCCHHHHHH
Q 044366 901 ENPEARPTMKEVCN 914 (918)
Q Consensus 901 ~dp~~RPt~~evl~ 914 (918)
.||++|||++|+++
T Consensus 315 ~dP~~R~t~~e~l~ 328 (388)
T 3oz6_A 315 FNPNKRISANDALK 328 (388)
T ss_dssp SSGGGSCCHHHHTT
T ss_pred cCcccCCCHHHHhC
Confidence 99999999999975
No 194
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=348.16 Aligned_cols=262 Identities=26% Similarity=0.349 Sum_probs=196.4
Q ss_pred HhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHH--HhhccCCceeeEeccc-----c
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLA--LTEIRHRNIIKFHGFC-----S 716 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~~~~~~-----~ 716 (918)
..++|...+.||+|+||.||+|+. +++.||||++... ....+..|.++ ++.++||||+++++++ .
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 82 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA-------NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD 82 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG-------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc-------chhhHHHHHHHHHHHhccCcchhhheecccccccC
Confidence 347899999999999999999976 7899999998643 13445555555 4458999999999743 3
Q ss_pred cCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC------CCCeEEcCCCCCCeeeCCCCc
Q 044366 717 NAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDC------IPPIVHRDISSKNVLLDSEYE 790 (918)
Q Consensus 717 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~ivH~dlk~~Nill~~~~~ 790 (918)
.....++||||+++|+|.+++.... .++..++.++.|+++||+|||+.+ .++|+||||||+||+++.++.
T Consensus 83 ~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 158 (336)
T 3g2f_A 83 GRMEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGT 158 (336)
T ss_dssp SCEEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSC
T ss_pred CCceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCc
Confidence 3446789999999999999997543 589999999999999999999873 238999999999999999999
Q ss_pred EEEeccccccccCCCCC--------Cceeccccccccccccccc-------CCCCcccchhhHHHHHHHHHhCCCCCCcc
Q 044366 791 AHVSDFGFAKFLEPHSS--------NWTEFAGTVGYAAPELAYT-------MRATEKYDVYSFGVLALEVIKGYHPGDFV 855 (918)
Q Consensus 791 ~kl~DfG~~~~~~~~~~--------~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~slG~vl~el~tg~~p~~~~ 855 (918)
+||+|||+++.+..... ......||+.|+|||++.+ ..++.++|||||||++|||++|..|+...
T Consensus 159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 238 (336)
T 3g2f_A 159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238 (336)
T ss_dssp EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence 99999999987653221 1234568999999999876 45677899999999999999997764322
Q ss_pred hhhhhhh-------------hhhHh-hhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 856 STIFSSI-------------SNMII-EVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 856 ~~~~~~~-------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
....... ..... ..........+............+.+++.+||+.||++|||++|+++.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 239 ESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp SCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred cchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 1100000 00000 00111112222222233345667999999999999999999999999886
No 195
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.6e-38 Score=339.64 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=201.8
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
..++|...+.||+|+||.||+|+. .+|+.||+|+++... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP----AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYY 82 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc----ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEE
Confidence 346788999999999999999965 479999999987532 223467899999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeee---CCCCcEEEeccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLL---DSEYEAHVSDFGFA 799 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfG~~ 799 (918)
+||||+++|+|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 83 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 83 LVMQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp EEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred EEEEcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence 9999999999999987643 489999999999999999999999 99999999999999 77889999999999
Q ss_pred cccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCC
Q 044366 800 KFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPT 879 (918)
Q Consensus 800 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (918)
...... ......|++.|+|||++.+..++.++||||+|+++|||++|+.||...... .... .+.......
T Consensus 157 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~---~i~~~~~~~ 226 (304)
T 2jam_A 157 KMEQNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES-----KLFE---KIKEGYYEF 226 (304)
T ss_dssp CCCCCB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHH---HHHHCCCCC
T ss_pred eecCCC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-----HHHH---HHHcCCCCC
Confidence 764432 223456899999999999999999999999999999999999998643321 0111 111111111
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 880 PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 880 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
...........+.+++.+|++.||++|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 227 ESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111123356889999999999999999999985
No 196
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.9e-38 Score=364.13 Aligned_cols=253 Identities=23% Similarity=0.356 Sum_probs=207.8
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|... +|+.||||++...... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-BSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcc-cchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 457899999999999999999654 7999999998764322 23456889999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeee---CCCCcEEEecccccc
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLL---DSEYEAHVSDFGFAK 800 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfG~~~ 800 (918)
||||+++|+|.+++... ..+++.+++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 104 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 99999999999998764 3489999999999999999999999 99999999999999 567899999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP 880 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (918)
.+.... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .. ...+........
T Consensus 178 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~-------~~~i~~~~~~~~ 247 (484)
T 3nyv_A 178 HFEASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-DI-------LKKVEKGKYTFE 247 (484)
T ss_dssp HBCCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HH-------HHHHHHCCCCCC
T ss_pred Eccccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-HH-------HHHHHcCCCCCC
Confidence 776433 3345679999999999876 6899999999999999999999998754321 11 111112222222
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..........+.+++.+||+.||.+|||++|+++
T Consensus 248 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 2222333456889999999999999999999985
No 197
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.3e-38 Score=337.35 Aligned_cols=248 Identities=19% Similarity=0.351 Sum_probs=199.0
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CC-------CEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccc
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SG-------NIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCS 716 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 716 (918)
.++|...+.||+|+||.||+|... ++ ..||+|++... .....+.+.+|+++++.++||||+++++++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 82 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA----HRNYSESFFEAASMMSKLSHKHLVLNYGVCV 82 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG----GGGGHHHHHHHHHHHHTSCCTTBCCEEEEEC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc----cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE
Confidence 467888999999999999999543 34 47999998653 2233578999999999999999999999999
Q ss_pred cCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCc------
Q 044366 717 NAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYE------ 790 (918)
Q Consensus 717 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~------ 790 (918)
+++..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 83 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 83 CGDENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp CTTCCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred eCCCCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccc
Confidence 9999999999999999999998643 3489999999999999999999999 9999999999999998887
Q ss_pred --EEEeccccccccCCCCCCceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCC-CCcchhhhhhhhhhH
Q 044366 791 --AHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHP-GDFVSTIFSSISNMI 866 (918)
Q Consensus 791 --~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p-~~~~~~~~~~~~~~~ 866 (918)
+||+|||++..... .....|++.|+|||++.+ ..++.++||||||+++|||++|..| +...... ...
T Consensus 158 ~~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-~~~---- 228 (289)
T 4fvq_A 158 PFIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ-RKL---- 228 (289)
T ss_dssp CEEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHH----
T ss_pred ceeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH-HHH----
Confidence 99999999976543 233467899999999987 6789999999999999999996554 4332211 100
Q ss_pred hhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 867 IEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
..... ....+... ...+.+++.+||+.||++|||++|+++.|++
T Consensus 229 -~~~~~-~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 272 (289)
T 4fvq_A 229 -QFYED-RHQLPAPK------AAELANLINNCMDYEPDHRPSFRAIIRDLNS 272 (289)
T ss_dssp -HHHHT-TCCCCCCS------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHT
T ss_pred -HHhhc-cCCCCCCC------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 00000 11111111 1347788999999999999999999999864
No 198
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=7.7e-38 Score=360.93 Aligned_cols=252 Identities=24% Similarity=0.347 Sum_probs=200.1
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|+. .+++.||+|+++..... ......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS--TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC--chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 45789999999999999999965 47899999998764322 2335789999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCC---CcEEEecccccc
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSE---YEAHVSDFGFAK 800 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~DfG~~~ 800 (918)
||||+++|+|.+++... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.. +.+||+|||+++
T Consensus 114 v~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 114 VMECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 99999999999988764 3489999999999999999999999 99999999999999764 459999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP 880 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (918)
...... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||...... . . ...+........
T Consensus 188 ~~~~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~----~---~~~i~~~~~~~~ 257 (494)
T 3lij_A 188 VFENQK-KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-E----I---LRKVEKGKYTFD 257 (494)
T ss_dssp ECBTTB-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-H----H---HHHHHHTCCCCC
T ss_pred ECCCCc-cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-H----H---HHHHHhCCCCCC
Confidence 776433 334567999999999886 46899999999999999999999998754321 1 1 111111222222
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..........+.+++.+||+.||.+|||+.|+++
T Consensus 258 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 2222233456889999999999999999999874
No 199
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.5e-38 Score=367.25 Aligned_cols=254 Identities=26% Similarity=0.448 Sum_probs=206.3
Q ss_pred HhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
..++|...+.||+|+||.||+|.+..+..||||+++.. ....++|.+|++++++++||||+++++++.+ +..++
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-----TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTT-----SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCC-----CCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence 45678888999999999999999888888999998753 2346789999999999999999999999876 67899
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.++++... ...+++.+++.|+.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 339 v~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp EECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred eeehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 999999999999997542 23489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCC
Q 044366 804 PHSS-NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPS 881 (918)
Q Consensus 804 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (918)
.... ......++..|+|||++.+..++.++|||||||++|||++ |+.||...... .+ ...+.. ..+.+.+
T Consensus 415 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--~~---~~~i~~--~~~~~~~- 486 (535)
T 2h8h_A 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EV---LDQVER--GYRMPCP- 486 (535)
T ss_dssp CHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--HH---HHHHHT--TCCCCCC-
T ss_pred CCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HH---HHHHHc--CCCCCCC-
Confidence 3211 1123346789999999999899999999999999999999 89998654321 11 111111 1111111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 882 RDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 882 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
.. ....+.++|.+||+.||++|||+++|++.|++
T Consensus 487 ~~---~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 520 (535)
T 2h8h_A 487 PE---CPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520 (535)
T ss_dssp TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CC---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 12 23467889999999999999999999999863
No 200
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-38 Score=335.43 Aligned_cols=252 Identities=23% Similarity=0.311 Sum_probs=202.0
Q ss_pred cCCCCce-eeccccceEEEEEEeC---CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCce
Q 044366 646 GNFGEKY-CIGKGGQRSVYKAELP---SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 721 (918)
Q Consensus 646 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 721 (918)
++|.+.. .||+|+||.||+|... +++.||||+++.. ......+.+.+|+++++.++||||+++++++ ..+..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~ 84 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG---TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 84 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc---cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCc
Confidence 4555555 8999999999999653 6788999998753 1223356799999999999999999999999 45668
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
++||||+++++|.+++... ...+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 85 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceee
Confidence 9999999999999999753 34589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 802 LEPHSSN---WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 802 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
....... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... .. .... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~---~~~i---~~~~~ 231 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EV---MAFI---EQGKR 231 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HH---HHHH---HTTCC
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HH---HHHH---hcCCc
Confidence 7544322 123346889999999998889999999999999999998 99998654321 01 1111 11111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
+..+.. ....+.+++.+||+.||++||++.|+++.|+
T Consensus 232 ~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 232 MECPPE---CPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp CCCCTT---CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCC---cCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111112 2346888999999999999999999999885
No 201
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9e-38 Score=336.51 Aligned_cols=253 Identities=25% Similarity=0.342 Sum_probs=197.9
Q ss_pred CCCCceeeccccceEEEEEEeC-CCC---EEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCce-
Q 044366 647 NFGEKYCIGKGGQRSVYKAELP-SGN---IFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHS- 721 (918)
Q Consensus 647 ~~~~~~~lg~G~~g~Vy~~~~~-~~~---~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~- 721 (918)
.|...+.||+|+||.||+|... +++ .||+|.+... ......+.|.+|+++++.++||||+++++++.+.+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI---TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC---CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc---ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCc
Confidence 4556688999999999999643 333 7999998652 2223356889999999999999999999999766655
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
++||||+.+|+|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 99 ~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EEEECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEEEecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 9999999999999999764 34589999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC----CCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 802 LEPHS----SNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 802 ~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
..... .......+++.|+|||.+.+..++.++||||||+++|+|++|..|+.......... .... ....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~----~~~~---~~~~ 246 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT----HFLA---QGRR 246 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH----HHHH---TTCC
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH----HHhh---cCCC
Confidence 64322 12234567899999999999999999999999999999999665533222111111 1111 1111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
....... ...+.+++.+||+.||.+|||++++++.|+
T Consensus 247 ~~~~~~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~l~ 283 (298)
T 3pls_A 247 LPQPEYC---PDSLYQVMQQCWEADPAVRPTFRVLVGEVE 283 (298)
T ss_dssp CCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCccc---hHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111112 246788999999999999999999999886
No 202
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.7e-38 Score=337.47 Aligned_cols=254 Identities=26% Similarity=0.394 Sum_probs=197.9
Q ss_pred hcCCCCceeeccccceEEEEEEeCC----CCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccc-ccCC
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELPS----GNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFC-SNAQ 719 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~ 719 (918)
..+|...+.||+|+||.||+|...+ +..||+|.+... ......+.+.+|+.++++++||||+++++++ ..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 100 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC---CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC---CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC
Confidence 3467888999999999999996532 235899988652 2223356799999999999999999999985 5566
Q ss_pred ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccc
Q 044366 720 HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFA 799 (918)
Q Consensus 720 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~ 799 (918)
..++||||+++|+|.++++.. ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a 175 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLA 175 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred ceEEEEeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccc
Confidence 889999999999999999764 34579999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC----CceecccccccccccccccCCCCcccchhhHHHHHHHHHhC-CCCCCcchhhhhhhhhhHhhhhhhcc
Q 044366 800 KFLEPHSS----NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKG-YHPGDFVSTIFSSISNMIIEVNQILD 874 (918)
Q Consensus 800 ~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~ 874 (918)
........ ......+|+.|+|||.+.+..++.++||||+|+++|||++| .+||...... ... . ....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-~~~----~---~~~~ 247 (298)
T 3f66_A 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DIT----V---YLLQ 247 (298)
T ss_dssp CCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT-THH----H---HHHT
T ss_pred ccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH-HHH----H---HHhc
Confidence 87654321 12344577899999999999999999999999999999995 5555433211 111 0 1111
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 875 HRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 875 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.......... ...+.+++.+||+.||++|||++|+++.|+
T Consensus 248 ~~~~~~~~~~---~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 248 GRRLLQPEYC---PDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp TCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCccC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111112 245888999999999999999999999986
No 203
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=9e-38 Score=361.28 Aligned_cols=255 Identities=25% Similarity=0.361 Sum_probs=202.5
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCC---------CCChHHHHHHHHHHhhccCCceeeEec
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDE---------TANPSEFLNEVLALTEIRHRNIIKFHG 713 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---------~~~~~~~~~e~~~l~~l~h~niv~~~~ 713 (918)
..++|.+.+.||+|+||.||+|.. .+++.||||++........ ....+.+.+|+.+++.++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 457899999999999999999965 4689999999876432211 133578999999999999999999999
Q ss_pred ccccCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC---c
Q 044366 714 FCSNAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY---E 790 (918)
Q Consensus 714 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~ 790 (918)
++.+++..++||||+++|+|.+++... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999999999998764 3489999999999999999999999 999999999999998876 6
Q ss_pred EEEeccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhh
Q 044366 791 AHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVN 870 (918)
Q Consensus 791 ~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~ 870 (918)
+||+|||++....... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... . . ..
T Consensus 188 ~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~----~---~~ 257 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDY-KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-D----I---IK 257 (504)
T ss_dssp EEECCCTTCEECCTTS-CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-H----H---HH
T ss_pred EEEEECCCCEEcCCCC-ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-H----H---HH
Confidence 9999999998776432 3345679999999999874 6899999999999999999999998754321 1 1 11
Q ss_pred hhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 871 QILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.+..................+.+++.+||+.||.+|||++|+++
T Consensus 258 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 258 KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11111111111111122356889999999999999999999975
No 204
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=6.5e-38 Score=336.16 Aligned_cols=254 Identities=25% Similarity=0.350 Sum_probs=201.2
Q ss_pred HhcCCCCce-eeccccceEEEEEEe---CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC
Q 044366 644 ATGNFGEKY-CIGKGGQRSVYKAEL---PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ 719 (918)
Q Consensus 644 ~~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 719 (918)
..++|...+ .||+|+||.||+|.. .+++.||||+++... ......+++.+|+++++.++||||+++++++ ..+
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~ 90 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 90 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESS
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc--cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCC
Confidence 345677777 899999999999943 346889999987542 1222357899999999999999999999999 567
Q ss_pred ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccc
Q 044366 720 HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFA 799 (918)
Q Consensus 720 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~ 799 (918)
..++||||+++++|.+++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 164 (291)
T 1xbb_A 91 SWMLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS 164 (291)
T ss_dssp SEEEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred CcEEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcc
Confidence 789999999999999999864 3489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCc---eecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhccc
Q 044366 800 KFLEPHSSNW---TEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDH 875 (918)
Q Consensus 800 ~~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 875 (918)
.......... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ... .... ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~---~~~~---~~ 236 (291)
T 1xbb_A 165 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVT---AMLE---KG 236 (291)
T ss_dssp EECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHH---HHHH---TT
T ss_pred eeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHH---HHHH---cC
Confidence 8775543321 22345788999999998889999999999999999999 99998754321 111 1111 11
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 876 RLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 876 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
..+..... ....+.+++.+||+.||++||++.++++.|+
T Consensus 237 ~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 237 ERMGCPAG---CPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp CCCCCCTT---CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111 2346888999999999999999999999886
No 205
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-38 Score=348.10 Aligned_cols=257 Identities=23% Similarity=0.332 Sum_probs=203.0
Q ss_pred hcCCCCceeeccccceEEEEEEe----CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCC
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL----PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQ 719 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 719 (918)
.++|...+.||+|+||.||+|+. .+|+.||||+++...........+.+.+|+++++.+ +||||+++++++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999976 478999999987644333333456678899999999 6999999999999999
Q ss_pred ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccc
Q 044366 720 HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFA 799 (918)
Q Consensus 720 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~ 799 (918)
..++||||+++|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 9999999999999999997643 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC-Cceeccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 800 KFLEPHSS-NWTEFAGTVGYAAPELAYT--MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 800 ~~~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
+.+..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ...... .......
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~---~~~~~~~ 282 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEIS---RRILKSE 282 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHH---HHHHHCC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHH---HHHhccC
Confidence 87643322 2334579999999999985 347889999999999999999999986432211 001111 1111111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARP-----TMKEVCNL 915 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP-----t~~evl~~ 915 (918)
.+ .... ....+.+++.+||+.||++|| +++|+++.
T Consensus 283 ~~-~~~~---~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 283 PP-YPQE---MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CC-CCTT---SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CC-CCcc---cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 11 1111 224578899999999999999 99999763
No 206
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6.1e-38 Score=334.59 Aligned_cols=254 Identities=22% Similarity=0.327 Sum_probs=199.8
Q ss_pred HhcCCCCceeeccccceEEEEEEeCC----CCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELPS----GNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ 719 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 719 (918)
..++|...+.||+|+||.||+|.... +..||+|.++... .....+.|.+|+.+++.++||||+++++++.+ +
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~ 85 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-E 85 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-S
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-C
Confidence 45678899999999999999996432 3469999987532 22235789999999999999999999999865 4
Q ss_pred ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccc
Q 044366 720 HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFA 799 (918)
Q Consensus 720 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~ 799 (918)
..++||||+++++|.+++... ...+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 86 ~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 160 (281)
T 3cc6_A 86 PTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLS 160 (281)
T ss_dssp SCEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGG
T ss_pred CCEEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCC
Confidence 568999999999999999764 24589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC-CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 800 KFLEPHSS-NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 800 ~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
........ ......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ... ...... ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~---~~~~~~--~~~ 233 (281)
T 3cc6_A 161 RYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVI---GVLEKG--DRL 233 (281)
T ss_dssp GCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHH---HHHHHT--CCC
T ss_pred cccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHH---HHHhcC--CCC
Confidence 87654332 2233456889999999998899999999999999999998 99998643321 011 111110 111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
+. ... ....+.+++.+||+.||++|||++|+++.|+
T Consensus 234 ~~-~~~---~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 234 PK-PDL---CPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp CC-CTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC-CCC---CCHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence 11 111 2245888999999999999999999999886
No 207
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.1e-37 Score=333.22 Aligned_cols=249 Identities=24% Similarity=0.372 Sum_probs=205.0
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|... +++.||+|++....... ....+.+.+|+++++.++||||+++++++.+++..++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK-EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccch-HHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 467889999999999999999654 68899999986543222 2335789999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.+++.... .+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp EECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 999999999999997643 489999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcc
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRD 883 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (918)
.. ......|++.|+|||++.+..++.++||||||+++|+|++|+.||....... . ...+.......+ ..
T Consensus 166 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~-------~~~~~~~~~~~~-~~ 234 (284)
T 2vgo_A 166 SL--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE-T-------HRRIVNVDLKFP-PF 234 (284)
T ss_dssp SS--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-H-------HHHHHTTCCCCC-TT
T ss_pred cc--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH-H-------HHHHhccccCCC-Cc
Confidence 32 2234578999999999999899999999999999999999999987543211 0 011111111111 11
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 884 VTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 884 ~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
....+.+++.+|++.||.+|||++|+++
T Consensus 235 ---~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 235 ---LSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1245788999999999999999999985
No 208
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=5.5e-38 Score=340.62 Aligned_cols=262 Identities=23% Similarity=0.332 Sum_probs=196.1
Q ss_pred HHHHHhcCCCCceeeccccceEEEEEEeC----CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccc
Q 044366 640 EITKATGNFGEKYCIGKGGQRSVYKAELP----SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFC 715 (918)
Q Consensus 640 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 715 (918)
++....++|...+.||+|+||.||+|... +++.||+|+++.... .....+.+.+|+.++++++||||+++++++
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 105 (313)
T 3brb_A 28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--SQREIEEFLSEAACMKDFSHPNVIRLLGVC 105 (313)
T ss_dssp TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc--chhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence 33445678889999999999999999553 345899999875321 122246799999999999999999999998
Q ss_pred ccCC-----ceEEEEEeccCCChhHHhhcc---cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC
Q 044366 716 SNAQ-----HSFIVCEYLARGSLTTILRDD---AAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS 787 (918)
Q Consensus 716 ~~~~-----~~~lv~e~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 787 (918)
.+.+ ..++||||+++|+|.+++... .....+++.+++.++.|+++||+|||+. +|+||||||+||+++.
T Consensus 106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~ 182 (313)
T 3brb_A 106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRD 182 (313)
T ss_dssp EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECT
T ss_pred eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcC
Confidence 7654 359999999999999998543 2235689999999999999999999999 9999999999999999
Q ss_pred CCcEEEeccccccccCCCCC--CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhh
Q 044366 788 EYEAHVSDFGFAKFLEPHSS--NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISN 864 (918)
Q Consensus 788 ~~~~kl~DfG~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~ 864 (918)
++.+||+|||++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |..||...... .
T Consensus 183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~--- 257 (313)
T 3brb_A 183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--E--- 257 (313)
T ss_dssp TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G---
T ss_pred CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--H---
Confidence 99999999999987654322 1233456889999999999999999999999999999999 88887654321 0
Q ss_pred hHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 865 MIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
... .......+..... ....+.+++.+||+.||++|||++++++.|+
T Consensus 258 ~~~---~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 304 (313)
T 3brb_A 258 MYD---YLLHGHRLKQPED---CLDELYEIMYSCWRTDPLDRPTFSVLRLQLE 304 (313)
T ss_dssp HHH---HHHTTCCCCCBTT---CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHH---HHHcCCCCCCCcc---ccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 011 1111111111111 2346888999999999999999999999886
No 209
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.9e-38 Score=344.47 Aligned_cols=262 Identities=23% Similarity=0.344 Sum_probs=198.4
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD--DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS--SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC--CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 46788999999999999999965 469999999986531 122224568899999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++++|.++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 102 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp EEECCSEEHHHHHHHST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEecCCcchHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 99999999998887643 3489999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCceecccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhH-------------hhh
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTM-RATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMI-------------IEV 869 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~-------------~~~ 869 (918)
..........|++.|+|||++.+. .++.++||||+|+++|+|++|+.||.............. ...
T Consensus 176 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 176 APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred CCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence 555445566789999999998875 689999999999999999999999875543211110000 000
Q ss_pred hhhcccCCCCCCc--c----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 870 NQILDHRLPTPSR--D----VTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 870 ~~~~~~~~~~~~~--~----~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
........+.... . .......+.+++.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000011111100 0 1122457889999999999999999999875
No 210
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.5e-37 Score=342.83 Aligned_cols=261 Identities=21% Similarity=0.316 Sum_probs=200.0
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc------
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN------ 717 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------ 717 (918)
.++|...+.||+|+||.||+|+. .+|+.||||++..... .......+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC--SSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc--cccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 46899999999999999999965 5799999999866432 23335678999999999999999999999866
Q ss_pred --CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEec
Q 044366 718 --AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSD 795 (918)
Q Consensus 718 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 795 (918)
.+..++||||+++ ++.+.+.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred cCCceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEcc
Confidence 4468999999985 7877776542 3589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCC----CCceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhh
Q 044366 796 FGFAKFLEPHS----SNWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVN 870 (918)
Q Consensus 796 fG~~~~~~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~ 870 (918)
||+++.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..........
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~ 246 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCG 246 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHC
T ss_pred chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhC
Confidence 99998765322 22345678999999999876 457999999999999999999999987543211 0110000000
Q ss_pred hhcccC---------------CCCCCcchHHH------HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 871 QILDHR---------------LPTPSRDVTDK------LRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 871 ~~~~~~---------------~~~~~~~~~~~------~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
...... .........+. ...+.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 000000 00001111111 245889999999999999999999985
No 211
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=367.10 Aligned_cols=245 Identities=22% Similarity=0.322 Sum_probs=195.3
Q ss_pred eeccccceEEEEEEeC---CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEEEEecc
Q 044366 653 CIGKGGQRSVYKAELP---SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVCEYLA 729 (918)
Q Consensus 653 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 729 (918)
.||+|+||.||+|.+. ++..||||+++.. ......++|.+|+++++.++||||+++++++.. +..++||||++
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~ 418 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG---TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAG 418 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCC---CSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCC---CChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCC
Confidence 7999999999999653 4667999998764 233456889999999999999999999999976 56899999999
Q ss_pred CCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCCCCCCc
Q 044366 730 RGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEPHSSNW 809 (918)
Q Consensus 730 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~~~~~~ 809 (918)
+|+|.+++... ...+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.......
T Consensus 419 ~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 419 GGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp TCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred CCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 99999999754 34589999999999999999999999 99999999999999999999999999998765433221
Q ss_pred ---eecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcchH
Q 044366 810 ---TEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDVT 885 (918)
Q Consensus 810 ---~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (918)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .+. .. +........+..
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~---~~---i~~~~~~~~p~~-- 563 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVM---AF---IEQGKRMECPPE-- 563 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHH---HH---HHTTCCCCCCTT--
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHH---HH---HHcCCCCCCCCc--
Confidence 22345689999999999999999999999999999998 99998754321 111 11 111111111112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 886 DKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 886 ~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
....+.+++.+||+.||++||++++|++.|+
T Consensus 564 -~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 564 -CPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp -CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHH
T ss_pred -CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 2356888999999999999999999999885
No 212
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=350.51 Aligned_cols=258 Identities=17% Similarity=0.224 Sum_probs=200.0
Q ss_pred hcCCCCceeeccccceEEEEEEeC---------CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceee-----
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP---------SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIK----- 710 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~----- 710 (918)
.++|...+.||+|+||.||+|... +++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~ 111 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRAAKPLQVNKWKKL 111 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHhcccchhhhhhhh
Confidence 368999999999999999999765 3789999998642 35789999999999999998
Q ss_pred ----------Eeccccc-CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCC
Q 044366 711 ----------FHGFCSN-AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDIS 779 (918)
Q Consensus 711 ----------~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 779 (918)
+++++.. ++..++||||+ +++|.+++.... ...+++.+++.++.||+.||+|||+. +|+|||||
T Consensus 112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dik 186 (352)
T 2jii_A 112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVT 186 (352)
T ss_dssp TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCC
T ss_pred ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCC
Confidence 4555544 67889999999 899999998642 34589999999999999999999999 99999999
Q ss_pred CCCeeeCCCC--cEEEeccccccccCCCCC-------CceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCC
Q 044366 780 SKNVLLDSEY--EAHVSDFGFAKFLEPHSS-------NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYH 850 (918)
Q Consensus 780 ~~Nill~~~~--~~kl~DfG~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~ 850 (918)
|+||+++.++ .+||+|||+++.+..... ......||+.|+|||++.+..++.++||||||+++|||++|+.
T Consensus 187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 266 (352)
T 2jii_A 187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL 266 (352)
T ss_dssp GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999998 899999999987654322 1233478999999999999899999999999999999999999
Q ss_pred CCCcchhhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 851 PGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 851 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
||.........+............. ..............+.+++.+||+.||++|||++++++.|+
T Consensus 267 pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 267 PWTNCLPNTEDIMKQKQKFVDKPGP-FVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp TTGGGTTCHHHHHHHHHHHHHSCCC-EECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred CcccCCcCHHHHHHHHHhccCChhh-hhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 9875432222222211111111000 00000000112356888999999999999999999999885
No 213
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=348.83 Aligned_cols=249 Identities=16% Similarity=0.125 Sum_probs=200.0
Q ss_pred HHhcCCCCceeeccccceEEEEE------EeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc---CCceeeEec
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKA------ELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR---HRNIIKFHG 713 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~------~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~ 713 (918)
...++|.+.+.||+|+||.||+| ...+++.||||+++.. ...++..|+++++.++ |+||+++++
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~~~~l~~~~~~~iv~~~~ 134 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-------NPWEFYIGTQLMERLKPSMQHMFMKFYS 134 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-------CHHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-------ChhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence 34577999999999999999999 3457899999998642 3567888888888886 999999999
Q ss_pred ccccCCceEEEEEeccCCChhHHhhccc--ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC----
Q 044366 714 FCSNAQHSFIVCEYLARGSLTTILRDDA--AAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS---- 787 (918)
Q Consensus 714 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---- 787 (918)
++..++..++||||+++|+|.+++.... ....+++.+++.|+.||+.||+|||+. +||||||||+||+++.
T Consensus 135 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~ 211 (365)
T 3e7e_A 135 AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLE 211 (365)
T ss_dssp EEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTC
T ss_pred eeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccC
Confidence 9999999999999999999999997532 245699999999999999999999999 9999999999999998
Q ss_pred -------CCcEEEeccccccccCC--CCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhh
Q 044366 788 -------EYEAHVSDFGFAKFLEP--HSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTI 858 (918)
Q Consensus 788 -------~~~~kl~DfG~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~ 858 (918)
++.+||+|||+|+.+.. .........||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~ 291 (365)
T 3e7e_A 212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG 291 (365)
T ss_dssp C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT
T ss_pred ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC
Confidence 89999999999976542 223345567999999999999999999999999999999999999997533221
Q ss_pred hhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHhh
Q 044366 859 FSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEAR-PTMKEVCNLLC 917 (918)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R-Pt~~evl~~L~ 917 (918)
. .......... .. ...+.+++..|++.+|.+| |++.++.+.|+
T Consensus 292 ~-----------~~~~~~~~~~--~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 292 E-----------CKPEGLFRRL--PH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp E-----------EEECSCCTTC--SS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred c-----------eeechhcccc--Cc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 0 0011111111 11 2356678888999999998 57777776654
No 214
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=8.8e-38 Score=341.13 Aligned_cols=254 Identities=25% Similarity=0.370 Sum_probs=200.4
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEE--EEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCCce
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIF--AVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 721 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~v--avK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 721 (918)
++|...+.||+|+||.||+|+. .+|+.+ |+|.++... .....+.+.+|+++++++ +||||+++++++.+++..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc---chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 6788999999999999999965 456644 999886432 223456799999999999 899999999999999999
Q ss_pred EEEEEeccCCChhHHhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCC
Q 044366 722 FIVCEYLARGSLTTILRDDA-------------AAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSE 788 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 788 (918)
++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCC
Confidence 99999999999999997643 234689999999999999999999999 99999999999999999
Q ss_pred CcEEEeccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHh
Q 044366 789 YEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMII 867 (918)
Q Consensus 789 ~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~ 867 (918)
+.+||+|||+++...... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ....
T Consensus 179 ~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~ 252 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYE 252 (327)
T ss_dssp GCEEECCTTCEESSCEEC-CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHH
T ss_pred CeEEEcccCcCccccccc-cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-----HHHH
Confidence 999999999997543221 1233456889999999998889999999999999999998 99998654321 0111
Q ss_pred hhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 868 EVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
. +........... ....+.+++.+||+.||++|||++|+++.|.
T Consensus 253 ~---~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 253 K---LPQGYRLEKPLN---CDDEVYDLMRQCWREKPYERPSFAQILVSLN 296 (327)
T ss_dssp H---GGGTCCCCCCTT---BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred H---hhcCCCCCCCCC---CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1 111111111111 2246888999999999999999999999875
No 215
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.1e-37 Score=334.32 Aligned_cols=248 Identities=21% Similarity=0.321 Sum_probs=200.0
Q ss_pred HhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCCce
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 721 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 721 (918)
..++|...+.||+|+||.||+|... +++.||||+++.... ......++.+|+..+..+ +||||+++++++.+++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~ 86 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA--GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM 86 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT--TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc--ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence 3567999999999999999999654 799999999875322 223356789999999999 999999999999999999
Q ss_pred EEEEEeccCCChhHHhhcccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCC------------
Q 044366 722 FIVCEYLARGSLTTILRDDAA-AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSE------------ 788 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~------------ 788 (918)
++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~ 163 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDE 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccc
Confidence 999999999999999976432 24589999999999999999999999 99999999999999844
Q ss_pred -------CcEEEeccccccccCCCCCCceecccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhhhh
Q 044366 789 -------YEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTM-RATEKYDVYSFGVLALEVIKGYHPGDFVSTIFS 860 (918)
Q Consensus 789 -------~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~ 860 (918)
..+||+|||.+....... ...|++.|+|||++.+. .++.++||||||+++|+|++|.+|+......
T Consensus 164 ~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-- 237 (289)
T 1x8b_A 164 DDWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW-- 237 (289)
T ss_dssp ------CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH--
T ss_pred ccccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH--
Confidence 479999999998775432 23589999999998765 5668999999999999999998875433211
Q ss_pred hhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 861 SISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..+.....+..+... ...+.+++.+||+.||++|||++|+++
T Consensus 238 ---------~~~~~~~~~~~~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 238 ---------HEIRQGRLPRIPQVL---SQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ---------HHHHTTCCCCCSSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---------HHHHcCCCCCCCccc---CHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 111112222222222 245788999999999999999999985
No 216
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=339.59 Aligned_cols=254 Identities=24% Similarity=0.387 Sum_probs=196.8
Q ss_pred HHHhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEeccccc--
Q 044366 642 TKATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSN-- 717 (918)
Q Consensus 642 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-- 717 (918)
....++|...+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.+++++ +||||+++++++..
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-----GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC-----cccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 34568899999999999999999965 57999999998642 23357899999999999 89999999999865
Q ss_pred ----CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEE
Q 044366 718 ----AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHV 793 (918)
Q Consensus 718 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 793 (918)
.+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEE
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEE
Confidence 467899999999999999998653 34589999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCCceecccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhh
Q 044366 794 SDFGFAKFLEPHSSNWTEFAGTVGYAAPELAY-----TMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIE 868 (918)
Q Consensus 794 ~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~ 868 (918)
+|||++..............|++.|+|||++. +..++.++||||||+++|+|++|+.||........ ...
T Consensus 171 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~ 245 (326)
T 2x7f_A 171 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-----LFL 245 (326)
T ss_dssp CCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----HHH
T ss_pred eeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-----HHH
Confidence 99999987755443444567899999999986 56688999999999999999999999865432111 011
Q ss_pred hhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 869 VNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
... ........... ...+.+++.+||+.||.+|||++|+++
T Consensus 246 ~~~--~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 246 IPR--NPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHH--SCCCCCSCSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhc--CccccCCcccc---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111 11111111112 246788999999999999999999986
No 217
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-37 Score=344.65 Aligned_cols=256 Identities=20% Similarity=0.296 Sum_probs=193.9
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC----
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ---- 719 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 719 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 101 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence 46799999999999999999965 579999999986532 12223467899999999999999999999986653
Q ss_pred --ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccc
Q 044366 720 --HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFG 797 (918)
Q Consensus 720 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 797 (918)
..++||||+ +++|.++++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeee
Confidence 469999999 78999999753 489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHh---------
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMII--------- 867 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~--------- 867 (918)
+++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .......
T Consensus 174 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~ 249 (367)
T 1cm8_A 174 LARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEF 249 (367)
T ss_dssp TCEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHH
T ss_pred cccccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHH
Confidence 99876532 334578999999999877 678999999999999999999999987543211 1110000
Q ss_pred ----------hhhhhcccCC-CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 868 ----------EVNQILDHRL-PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 868 ----------~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.......... .............+.+++.+|++.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000000000 0000011122356889999999999999999999986
No 218
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.7e-38 Score=340.25 Aligned_cols=253 Identities=23% Similarity=0.336 Sum_probs=198.6
Q ss_pred HhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
..++|++.+.||+|+||.||+|... +|+.||+|++... .....+.+.+|+++++.++||||+++++++..++..+
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 92 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 92 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC----CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEE
Confidence 3467899999999999999999664 6899999998653 3344688999999999999999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+||||+++++|.+++... ...+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 93 lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp EEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred EEEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 999999999999998753 24589999999999999999999999 9999999999999999999999999998643
Q ss_pred CCCCCCceecccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 803 EPHSSNWTEFAGTVGYAAPELAY-----TMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 803 ~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
...........|++.|+|||++. +..++.++||||||+++|+|++|+.||........ ... ......
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~---~~~~~~ 239 (302)
T 2j7t_A 168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-----LLK---IAKSDP 239 (302)
T ss_dssp HHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----HHH---HHHSCC
T ss_pred cccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-----HHH---HhccCC
Confidence 22212223456899999999883 56788999999999999999999999865432110 011 111111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
+.. .........+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 240 PTL-LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp CCC-SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ccc-CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 110 111122356888999999999999999999975
No 219
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.2e-37 Score=331.96 Aligned_cols=248 Identities=21% Similarity=0.320 Sum_probs=197.2
Q ss_pred CCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc----CCce
Q 044366 647 NFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN----AQHS 721 (918)
Q Consensus 647 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~ 721 (918)
.|...+.||+|+||.||+|.. .++..||+|++...... ....+.+.+|+.+++.++||||+++++++.. ....
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC--HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 467778899999999999955 57889999998754322 2235679999999999999999999998754 4568
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEcCCCCCCeeeC-CCCcEEEecccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPP--IVHRDISSKNVLLD-SEYEAHVSDFGF 798 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~-~~~~~kl~DfG~ 798 (918)
++||||+++|+|.+++... ..+++..++.++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999999764 3489999999999999999999998 7 99999999999998 789999999999
Q ss_pred ccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCC
Q 044366 799 AKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLP 878 (918)
Q Consensus 799 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (918)
+...... ......|++.|+|||++.+ .++.++||||+|+++|+|++|+.||........... .......+
T Consensus 179 ~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~-------~~~~~~~~ 248 (290)
T 1t4h_A 179 ATLKRAS--FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR-------RVTSGVKP 248 (290)
T ss_dssp GGGCCTT--SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH-------HHTTTCCC
T ss_pred ccccccc--ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHH-------HHhccCCc
Confidence 9765432 3345678999999998874 589999999999999999999999865432211111 11111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 879 TPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 879 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
. .........+.+++.+||+.||++|||++|+++
T Consensus 249 ~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 249 A--SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G--GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c--ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0 001111246889999999999999999999986
No 220
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.4e-37 Score=369.42 Aligned_cols=252 Identities=22% Similarity=0.307 Sum_probs=207.6
Q ss_pred HHhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCCc
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 720 (918)
...++|...+.||+|+||.||+|+. .+++.||||+++...... ....+.+..|..++..+ +||+|+++++++.+.+.
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~ 416 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ-DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH-TTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccccc-HHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence 3457899999999999999999965 478899999997643222 23357788999999887 79999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
.++||||+++|+|.+++.... .+++.+++.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+++
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred EEEEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceee
Confidence 999999999999999998643 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCC
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTP 880 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (918)
.............||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+
T Consensus 491 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~--------~~~~~i~~~~~~~p 562 (674)
T 3pfq_A 491 ENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIMEHNVAYP 562 (674)
T ss_dssp ECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHSSCCCCC
T ss_pred ccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhCCCCCC
Confidence 7554445556678999999999999999999999999999999999999998754321 11112222222221
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCH-----HHHH
Q 044366 881 SRDVTDKLRSIMEVAILCLVENPEARPTM-----KEVC 913 (918)
Q Consensus 881 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~-----~evl 913 (918)
.. ...++.+++.+||+.||++||++ +||+
T Consensus 563 -~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~ 596 (674)
T 3pfq_A 563 -KS---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 596 (674)
T ss_dssp -TT---SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred -cc---CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHh
Confidence 11 23467889999999999999997 6665
No 221
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.4e-37 Score=330.85 Aligned_cols=250 Identities=24% Similarity=0.343 Sum_probs=196.8
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|.+.+.||+|+||.||+|... +|+.||||++...... .....+.+.+|+++++.++||||+++++++.+++..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIR-SLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccccc-chhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 468899999999999999999764 7999999998764322 23346789999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 89 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 999999999999997643 489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceecccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCc
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMRA-TEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSR 882 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (918)
... ......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||+..... ...... ....... +.
T Consensus 163 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~---~~~~~~~-~~ 232 (276)
T 2h6d_A 163 DGE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP-----TLFKKI---RGGVFYI-PE 232 (276)
T ss_dssp C--------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHH---HHCCCCC-CT
T ss_pred CCc-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-----HHHHHh---hcCcccC-ch
Confidence 432 2234568999999999987765 68999999999999999999998654321 111111 1111111 11
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 883 DVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 883 ~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.. ...+.+++.+||+.||++|||++|+++
T Consensus 233 ~~---~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 233 YL---NRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hc---CHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 11 245788999999999999999999986
No 222
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.9e-37 Score=331.41 Aligned_cols=245 Identities=22% Similarity=0.392 Sum_probs=201.7
Q ss_pred HhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc-----
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN----- 717 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----- 717 (918)
..++|...+.||+|+||.||+|... +|+.||+|+++.. .+.+.+|+++++.++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN--------NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC--------SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc--------cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 4467899999999999999999764 7999999998652 1456899999999999999999998754
Q ss_pred -----------CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeC
Q 044366 718 -----------AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLD 786 (918)
Q Consensus 718 -----------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 786 (918)
....++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV 156 (284)
T ss_dssp --------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred ccccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEc
Confidence 445799999999999999997643 34589999999999999999999999 999999999999999
Q ss_pred CCCcEEEeccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhH
Q 044366 787 SEYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMI 866 (918)
Q Consensus 787 ~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~ 866 (918)
.++.+||+|||++........ .....|++.|+|||++.+..++.++||||||+++|||++|..|+.......
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~------- 228 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDGK-RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFF------- 228 (284)
T ss_dssp ETTEEEECCCTTCEESSCCSC-CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHH-------
T ss_pred CCCCEEECcchhheecccccc-ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHH-------
Confidence 999999999999987765432 234568999999999999899999999999999999999998853221111
Q ss_pred hhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 867 IEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
. .......+. . ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 229 ~---~~~~~~~~~---~---~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 229 T---DLRDGIISD---I---FDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp H---HHHTTCCCT---T---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred H---Hhhcccccc---c---CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1 111111111 1 1235778999999999999999999999875
No 223
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=8.3e-38 Score=353.92 Aligned_cols=199 Identities=23% Similarity=0.350 Sum_probs=166.9
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccC-----
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNA----- 718 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 718 (918)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+++++.++||||+++++++...
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT--TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh--cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 46899999999999999999954 578999999986531 1223356889999999999999999999998665
Q ss_pred CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccc
Q 044366 719 QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGF 798 (918)
Q Consensus 719 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 798 (918)
+..++||||++ |+|.++++.. ..+++..++.++.||++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCC
Confidence 57899999997 5999999764 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC----------------------Cceeccccccccccccc-ccCCCCcccchhhHHHHHHHHHhCCCCC
Q 044366 799 AKFLEPHSS----------------------NWTEFAGTVGYAAPELA-YTMRATEKYDVYSFGVLALEVIKGYHPG 852 (918)
Q Consensus 799 ~~~~~~~~~----------------------~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~slG~vl~el~tg~~p~ 852 (918)
++....... .....+||+.|+|||++ .+..++.++||||+||++|||++|..|+
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 987754321 13556789999999986 5667999999999999999999865554
No 224
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6.6e-38 Score=333.77 Aligned_cols=248 Identities=28% Similarity=0.397 Sum_probs=194.6
Q ss_pred hcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc-CCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN-AQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~l 723 (918)
.++|...+.||+|+||.||+|+. .|+.||||+++.. ...+.+.+|+++++.++||||+++++++.+ .+..++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC------C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecch------hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 46789999999999999999987 5889999998642 235789999999999999999999998654 457899
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.+++.... ...+++.+++.++.|+++||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred EEecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 999999999999997643 23378999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCc
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSR 882 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (918)
... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ....... .........
T Consensus 169 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~~~~---~~~~~~~~~ 237 (278)
T 1byg_A 169 STQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVE---KGYKMDAPD 237 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHHHHT---TTCCCCCCT
T ss_pred ccc---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHh---cCCCCCCcc
Confidence 322 23457889999999999899999999999999999998 99998643221 1111111 111111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 883 DVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 883 ~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
. ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 238 ~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 238 G---CPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp T---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred c---CCHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence 1 2346888999999999999999999999886
No 225
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.9e-37 Score=334.21 Aligned_cols=261 Identities=22% Similarity=0.307 Sum_probs=202.5
Q ss_pred cCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
++|...+.||+|+||.||+|... +|+.||||+++.... .....+.+.+|++++++++||||+++++++..++..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc--chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence 57889999999999999999654 799999999876422 223357889999999999999999999999999999999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
|||++ |+|.+++.... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp EECCS-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred EEccc-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 99998 59999997653 24589999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCceecccccccccccccccCC-CCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhh-----------
Q 044366 805 HSSNWTEFAGTVGYAAPELAYTMR-ATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQI----------- 872 (918)
Q Consensus 805 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----------- 872 (918)
.........+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||....... ............
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 156 PVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp CSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGS
T ss_pred CccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHhhcC
Confidence 444444567899999999988765 7899999999999999999999987554321 111111100000
Q ss_pred --cccCCCCC-Ccch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 873 --LDHRLPTP-SRDV----TDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 873 --~~~~~~~~-~~~~----~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.....+.. .... ......+.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 0001 112356889999999999999999999986
No 226
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=9.3e-38 Score=340.95 Aligned_cols=257 Identities=25% Similarity=0.382 Sum_probs=201.4
Q ss_pred HhcCCCCceeeccccceEEEEEEe------CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL------PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN 717 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 717 (918)
..++|...+.||+|+||.||+|.. .+++.||||++.... ......++.+|+.++++++||||+++++++.+
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 104 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 104 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc---chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC
Confidence 347899999999999999999973 357789999986421 22235678999999999999999999999999
Q ss_pred CCceEEEEEeccCCChhHHhhcccc----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC---CCc
Q 044366 718 AQHSFIVCEYLARGSLTTILRDDAA----AKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS---EYE 790 (918)
Q Consensus 718 ~~~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~ 790 (918)
.+..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++. +..
T Consensus 105 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~ 181 (327)
T 2yfx_A 105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRV 181 (327)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCC
T ss_pred CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcce
Confidence 9999999999999999999986532 24589999999999999999999999 9999999999999994 446
Q ss_pred EEEeccccccccCCCCC--CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHh
Q 044366 791 AHVSDFGFAKFLEPHSS--NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMII 867 (918)
Q Consensus 791 ~kl~DfG~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~ 867 (918)
+||+|||++........ ......|++.|+|||++.+..++.++||||||+++|||++ |+.||...... ... .
T Consensus 182 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~---~ 256 (327)
T 2yfx_A 182 AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVL---E 256 (327)
T ss_dssp EEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHH---H
T ss_pred EEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHH---H
Confidence 99999999986543322 2234567899999999998899999999999999999998 99997644321 111 1
Q ss_pred hhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 868 EVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.+............ ...+.+++.+||+.||++||+++|+++.|+
T Consensus 257 ---~~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 257 ---FVTSGGRMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp ---HHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---HHhcCCCCCCCCCC---CHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 11111111111222 246788999999999999999999999875
No 227
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=7e-38 Score=340.53 Aligned_cols=257 Identities=21% Similarity=0.333 Sum_probs=200.5
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccc----cCC
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCS----NAQ 719 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----~~~ 719 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++. ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH----EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC----CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence 46799999999999999999965 68999999998652 2233578999999999999999999999986 345
Q ss_pred ceEEEEEeccCCChhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccc
Q 044366 720 HSFIVCEYLARGSLTTILRDDA-AAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGF 798 (918)
Q Consensus 720 ~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 798 (918)
..++||||+++|+|.+++.... ....+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 7899999999999999997632 235689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC---------ceecccccccccccccccCC---CCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhH
Q 044366 799 AKFLEPHSSN---------WTEFAGTVGYAAPELAYTMR---ATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMI 866 (918)
Q Consensus 799 ~~~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~ 866 (918)
+......... .....|++.|+|||++.+.. ++.++||||||+++|||++|+.||+...........
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-- 258 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL-- 258 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHH--
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhH--
Confidence 8765422111 12345799999999987544 688999999999999999999997532211111111
Q ss_pred hhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 867 IEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.... ....+.. . .....+.+++.+||+.||.+|||++|+++.|+
T Consensus 259 -~~~~--~~~~~~~-~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 259 -AVQN--QLSIPQS-P---RHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp -HHHC--C--CCCC-T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -Hhhc--cCCCCcc-c---cCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 1111 1111111 1 12346888999999999999999999999885
No 228
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.6e-37 Score=332.58 Aligned_cols=257 Identities=17% Similarity=0.235 Sum_probs=197.7
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccc-ccCCce
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFC-SNAQHS 721 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~ 721 (918)
..++|...+.||+|+||.||+|.. .+++.||||++.... ....+.+|+++++.++|++++..++++ ..++..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc------cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCce
Confidence 457899999999999999999964 678999999865431 123578999999999988877766655 667788
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeee---CCCCcEEEecccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLL---DSEYEAHVSDFGF 798 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfG~ 798 (918)
++||||+ +++|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 81 ~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~ 154 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEEEECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEEEcc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcc
Confidence 9999999 89999999754 23589999999999999999999999 99999999999999 7889999999999
Q ss_pred ccccCCCCC-------CceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhh
Q 044366 799 AKFLEPHSS-------NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQ 871 (918)
Q Consensus 799 ~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 871 (918)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ........
T Consensus 155 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~ 232 (296)
T 4hgt_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR--QKYERISE 232 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS--SHHHHHHH
T ss_pred ceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh--hhhhhhhc
Confidence 987755432 123457899999999999999999999999999999999999998653321100 00000000
Q ss_pred hcccCCCCCCc-chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 872 ILDHRLPTPSR-DVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 872 ~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.....+.. ........+.+++.+||+.||++|||++++++.|+
T Consensus 233 ---~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 233 ---KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp ---HHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred ---ccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 00000000 00011246889999999999999999999999885
No 229
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.6e-37 Score=331.42 Aligned_cols=255 Identities=16% Similarity=0.223 Sum_probs=200.5
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccc-ccCCceE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFC-SNAQHSF 722 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~ 722 (918)
.++|...+.||+|+||.||+|+. .+|+.||||++... ...+.+.+|+.+++.++|++++..++++ ..++..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK------TKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESC------SSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCC------cchhHHHHHHHHHHHhhcCCCCCccccccCCCCceE
Confidence 46899999999999999999965 68999999987642 1235789999999999988876666655 5667789
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeC---CCCcEEEeccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLD---SEYEAHVSDFGFA 799 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~DfG~~ 799 (918)
+||||+ +++|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 999999 88999999743 23589999999999999999999999 999999999999994 7889999999999
Q ss_pred cccCCCCCC-------ceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhh--hhhhhhHhhhh
Q 044366 800 KFLEPHSSN-------WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIF--SSISNMIIEVN 870 (918)
Q Consensus 800 ~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~--~~~~~~~~~~~ 870 (918)
......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||....... .........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-- 233 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK-- 233 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH--
T ss_pred ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccc--
Confidence 877654321 244578999999999999999999999999999999999999987532210 011110000
Q ss_pred hhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 871 QILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
. .....+. ........+.+++.+||+.||++|||++++++.|+
T Consensus 234 ~-~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 234 K-MSTPIEV---LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp H-HHSCHHH---HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred c-cCCchHH---HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence 0 0000000 00011246888999999999999999999999886
No 230
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=340.12 Aligned_cols=261 Identities=22% Similarity=0.373 Sum_probs=204.3
Q ss_pred hcCCCCceeeccccceEEEEEEe-----CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccC-
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-----PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNA- 718 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~- 718 (918)
.++|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++++.++||||+++++++...
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 115 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC----CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC--
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC
Confidence 45688899999999999999973 46889999998652 233356899999999999999999999988654
Q ss_pred -CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccc
Q 044366 719 -QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFG 797 (918)
Q Consensus 719 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 797 (918)
...++||||+++|+|.+++.... ..+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred CCceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCc
Confidence 37899999999999999997653 3589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCC---ceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhh-h------hhHh
Q 044366 798 FAKFLEPHSSN---WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSI-S------NMII 867 (918)
Q Consensus 798 ~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~-~------~~~~ 867 (918)
++......... .....++..|+|||.+.+..++.++||||||+++|||++|..|+.......... . ....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 270 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH
Confidence 99887654322 123456778999999998889999999999999999999999865432111000 0 0000
Q ss_pred hhhhhcccC-CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 868 EVNQILDHR-LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 868 ~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
...+.+... ....... ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 271 ~~~~~~~~~~~~~~~~~---~~~~l~~li~~cl~~dP~~Rps~~el~~~L~ 318 (326)
T 2w1i_A 271 HLIELLKNNGRLPRPDG---CPDEIYMIMTECWNNNVNQRPSFRDLALRVD 318 (326)
T ss_dssp HHHHHHHTTCCCCCCTT---CCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCCc---ccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111111 1111111 2356888999999999999999999999886
No 231
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-37 Score=356.29 Aligned_cols=195 Identities=22% Similarity=0.349 Sum_probs=154.4
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccc-----cC
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCS-----NA 718 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-----~~ 718 (918)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+++++.++||||+++++++. ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 129 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF--EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKF 129 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh--cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccC
Confidence 36799999999999999999954 579999999986531 12233567899999999999999999999984 33
Q ss_pred CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccc
Q 044366 719 QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGF 798 (918)
Q Consensus 719 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 798 (918)
...|+||||++ |+|.++++.. ..+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 130 ~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 130 DELYVVLEIAD-SDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp CCEEEEECCCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccc-cchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeeccccc
Confidence 57899999985 6999998764 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC---------------------------Cceeccccccccccccc-ccCCCCcccchhhHHHHHHHHHhC
Q 044366 799 AKFLEPHSS---------------------------NWTEFAGTVGYAAPELA-YTMRATEKYDVYSFGVLALEVIKG 848 (918)
Q Consensus 799 ~~~~~~~~~---------------------------~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~slG~vl~el~tg 848 (918)
++....... .....+||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 987653221 22445789999999976 566799999999999999999994
No 232
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1e-38 Score=355.37 Aligned_cols=245 Identities=16% Similarity=0.156 Sum_probs=189.2
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHH---HHHhhccCCceeeEe-------c
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEV---LALTEIRHRNIIKFH-------G 713 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~niv~~~-------~ 713 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++...... .....+.|.+|+ +.++.++||||++++ +
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C-CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeecccc-chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 46788889999999999999975 57999999999753222 223357899999 455666899999998 4
Q ss_pred ccccCC-----------------ceEEEEEeccCCChhHHhhcccc----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 044366 714 FCSNAQ-----------------HSFIVCEYLARGSLTTILRDDAA----AKEFSWNQRMNVIKGVANALSYLHHDCIPP 772 (918)
Q Consensus 714 ~~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ 772 (918)
++.+++ ..++||||+ +|+|.+++..... ...+++..++.|+.||+.||+|||+. +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 444332 378999999 5799999986431 12244688899999999999999999 9
Q ss_pred eEEcCCCCCCeeeCCCCcEEEeccccccccCCCCCCceecccccccccccccccC-----------CCCcccchhhHHHH
Q 044366 773 IVHRDISSKNVLLDSEYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTM-----------RATEKYDVYSFGVL 841 (918)
Q Consensus 773 ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~slG~v 841 (918)
|+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 99999999999999999999999999986432 3344567 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 842 ALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 842 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
+|||++|+.||....... . ...+. ...+ . ....+.+++.+||+.||++|||+.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~-~-------~~~~~-~~~~----~---~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALG-G-------SEWIF-RSCK----N---IPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------C-C-------SGGGG-SSCC----C---CCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCccccccc-c-------hhhhh-hhcc----C---CCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999999986433210 0 00111 1111 1 1246788999999999999999999985
No 233
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.8e-37 Score=335.98 Aligned_cols=252 Identities=18% Similarity=0.267 Sum_probs=199.1
Q ss_pred cCCCCceeeccccceEEEEEE-eCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc-CCceeeEeccccc--CCce
Q 044366 646 GNFGEKYCIGKGGQRSVYKAE-LPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR-HRNIIKFHGFCSN--AQHS 721 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~ 721 (918)
++|...+.||+|+||.||+|. ..+++.||||+++. ...+.+.+|+++++.++ ||||+++++++.+ ....
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-------~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-------VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-------CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc-------cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 678899999999999999995 46899999999853 23578999999999997 9999999999977 6678
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC-cEEEecccccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY-EAHVSDFGFAK 800 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~DfG~~~ 800 (918)
++||||+++++|.+++.. +++.+++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++
T Consensus 109 ~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 999999999999999853 78899999999999999999999 999999999999999776 89999999998
Q ss_pred ccCCCCCCceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHh-----hhhhhcc
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMII-----EVNQILD 874 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~-----~~~~~~~ 874 (918)
....... .....|+..|+|||++.+ ..++.++||||+||++|||++|+.||............... .......
T Consensus 180 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 180 FYHPGQE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp ECCTTCC-CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EcCCCCc-cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHH
Confidence 7654332 344578999999999877 66899999999999999999999998543322222111110 0000000
Q ss_pred cCCCC---------------------CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 875 HRLPT---------------------PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 875 ~~~~~---------------------~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..... ...........+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 00001112357889999999999999999999986
No 234
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.4e-37 Score=333.21 Aligned_cols=256 Identities=24% Similarity=0.350 Sum_probs=204.9
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCC-----CCChHHHHHHHHHHhhcc-CCceeeEecccc
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDE-----TANPSEFLNEVLALTEIR-HRNIIKFHGFCS 716 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-----~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~ 716 (918)
..++|...+.||+|+||.||+|.. .+|+.||||+++....... ....+.+.+|++++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 457899999999999999999965 4789999999865321110 112356889999999995 999999999999
Q ss_pred cCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecc
Q 044366 717 NAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDF 796 (918)
Q Consensus 717 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 796 (918)
.++..++||||+++++|.+++... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 999999999999999999999764 3489999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCceecccccccccccccc------cCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhh
Q 044366 797 GFAKFLEPHSSNWTEFAGTVGYAAPELAY------TMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVN 870 (918)
Q Consensus 797 G~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~ 870 (918)
|.+....... ......|++.|+|||++. ...++.++||||||+++|||++|+.||...... ... .
T Consensus 169 g~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~-------~ 239 (298)
T 1phk_A 169 GFSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM-LML-------R 239 (298)
T ss_dssp TTCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHH-------H
T ss_pred cchhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH-HHH-------H
Confidence 9998775433 234457899999999885 446788999999999999999999998654321 000 1
Q ss_pred hhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 871 QILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.+..................+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 240 MIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11111111111222233456889999999999999999999975
No 235
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.6e-37 Score=332.17 Aligned_cols=253 Identities=23% Similarity=0.312 Sum_probs=200.2
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccc--ccCCce
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFC--SNAQHS 721 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~--~~~~~~ 721 (918)
.++|.+.+.||+|+||.||+|.. .+++.||+|+++...........+.+.+|+++++.++||||+++++++ .+.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 47899999999999999999965 478999999997654333334467899999999999999999999988 455688
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
++||||++++ +.+++.... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999876 777776543 34689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC--CceecccccccccccccccCC--CCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 802 LEPHSS--NWTEFAGTVGYAAPELAYTMR--ATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 802 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
..+... ......|++.|+|||++.+.. ++.++||||||+++|||++|+.||...... .. . ..+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~----~---~~i~~~~~ 230 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY-KL----F---ENIGKGSY 230 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HH----H---HHHHHCCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH-HH----H---HHHhcCCC
Confidence 654322 223456899999999987644 377999999999999999999998754321 11 1 11111111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..+ .. ....+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~-~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 231 AIP-GD---CGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp CCC-SS---SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCC-Cc---cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111 11 2245778999999999999999999986
No 236
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.5e-37 Score=366.43 Aligned_cols=246 Identities=26% Similarity=0.356 Sum_probs=195.4
Q ss_pred eeeccccceEEEEEEe---CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEEEEEec
Q 044366 652 YCIGKGGQRSVYKAEL---PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVCEYL 728 (918)
Q Consensus 652 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 728 (918)
+.||+|+||.||+|.+ ..++.||||+++... ......++|.+|++++++++|||||++++++.. +..++||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG--GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEcc
Confidence 4799999999999954 246789999987642 222335789999999999999999999999964 5588999999
Q ss_pred cCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCCCCCC
Q 044366 729 ARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEPHSSN 808 (918)
Q Consensus 729 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~~~~~ 808 (918)
++|+|.+++... ..+++.+++.|+.||+.||+|||+. +||||||||+||+++.++.+||+|||+++.+......
T Consensus 452 ~~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 452 ELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp TTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 999999999754 3489999999999999999999999 9999999999999999999999999999877544321
Q ss_pred ---ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcch
Q 044366 809 ---WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDV 884 (918)
Q Consensus 809 ---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 884 (918)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+. ..+. .......+..
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~---~~i~---~~~~~~~p~~- 596 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVT---AMLE---KGERMGCPAG- 596 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHH---HHHH---TTCCCCCCTT-
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHH---HHHH---cCCCCCCCCC-
Confidence 223456789999999999999999999999999999998 99998654321 111 1111 1111111112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 885 TDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 885 ~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
....+.+++.+||+.||++||++++|++.|+
T Consensus 597 --~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 597 --CPREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp --CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred --CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 2356888999999999999999999999886
No 237
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.5e-37 Score=342.00 Aligned_cols=257 Identities=22% Similarity=0.294 Sum_probs=191.7
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC----
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ---- 719 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 719 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc--CChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 46899999999999999999954 578999999987532 12223467889999999999999999999986654
Q ss_pred --ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccc
Q 044366 720 --HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFG 797 (918)
Q Consensus 720 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 797 (918)
..++||||+++ +|.+++.. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEee
Confidence 67999999985 78888853 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHh----------
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMII---------- 867 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~---------- 867 (918)
+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ......
T Consensus 173 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~ 250 (371)
T 2xrw_A 173 LARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFM 250 (371)
T ss_dssp C-----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHC-CCCCCHHHH
T ss_pred ccccccccc-ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHH
Confidence 998765322 23446789999999999998999999999999999999999999875432110 000000
Q ss_pred -----hhhhhcccC----------------CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 868 -----EVNQILDHR----------------LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 868 -----~~~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
......... .+............+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp TTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 000000000 01111111223567899999999999999999999986
No 238
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=9.6e-38 Score=340.02 Aligned_cols=256 Identities=25% Similarity=0.320 Sum_probs=196.5
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEccccccc----CCCCChHHHHHHHHHHhhccCCceeeEecccccC
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFS----DETANPSEFLNEVLALTEIRHRNIIKFHGFCSNA 718 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 718 (918)
..++|.+.+.||+|+||.||+|.. .+++.||||++...... ........+.+|+++++.++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 456799999999999999999965 56899999998654321 1112234688999999999999999999998765
Q ss_pred CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCc---EEEec
Q 044366 719 QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYE---AHVSD 795 (918)
Q Consensus 719 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~D 795 (918)
+ .++||||+++|+|.+++... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred c-eEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 5 89999999999999998754 3589999999999999999999999 9999999999999987664 99999
Q ss_pred cccccccCCCCCCceecccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhh
Q 044366 796 FGFAKFLEPHSSNWTEFAGTVGYAAPELAY---TMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQI 872 (918)
Q Consensus 796 fG~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 872 (918)
||++...... .......|++.|+|||++. +..++.++||||||+++|+|++|+.||.......... ...
T Consensus 161 fg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~------ 232 (322)
T 2ycf_A 161 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK-DQI------ 232 (322)
T ss_dssp CTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHH-HHH------
T ss_pred Cccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHH-HHH------
Confidence 9999876532 2223456899999999874 4668899999999999999999999986543211111 000
Q ss_pred cccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 873 LDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..................+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 233 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 011111111111122356889999999999999999999985
No 239
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=7.7e-38 Score=337.93 Aligned_cols=259 Identities=25% Similarity=0.398 Sum_probs=186.2
Q ss_pred HHHhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCc
Q 044366 642 TKATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 642 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 720 (918)
....++|...+.||+|+||.||+|.. .+++.||||++..... ....+++.+|+++++.++||||+++++++..++.
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 87 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE 87 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSSC
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC
Confidence 34567899999999999999999965 4789999999865321 2335678899999999999999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcc-----cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEec
Q 044366 721 SFIVCEYLARGSLTTILRDD-----AAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSD 795 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 795 (918)
.++||||+++|+|.+++... .....+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 164 (303)
T 2vwi_A 88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIAD 164 (303)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEe
Confidence 99999999999999998742 1234589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCC-----Cceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhh
Q 044366 796 FGFAKFLEPHSS-----NWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEV 869 (918)
Q Consensus 796 fG~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~ 869 (918)
||++........ ......|++.|+|||++.+ ..++.++||||||+++|||++|+.||...........
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~------ 238 (303)
T 2vwi_A 165 FGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML------ 238 (303)
T ss_dssp CHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH------
T ss_pred ccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH------
Confidence 999987653321 1234568999999999876 5689999999999999999999999875432211100
Q ss_pred hhhcccCCCCCC------cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 870 NQILDHRLPTPS------RDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 870 ~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
......+... .........+.+++.+||+.||.+|||++|+++
T Consensus 239 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 239 --TLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp --HHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred --HhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0000000000 000112346788999999999999999999986
No 240
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.8e-37 Score=332.98 Aligned_cols=256 Identities=26% Similarity=0.402 Sum_probs=194.5
Q ss_pred hcCCCCceeeccccceEEEEEEeC--CCC--EEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCc
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP--SGN--IFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 720 (918)
.++|...+.||+|+||.||+|++. +++ .||||+++..... .....+.+.+|+++++.++||||+++++++..+.
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence 467899999999999999999642 333 6899998764322 2233578999999999999999999999997765
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
.++||||+++|+|.+++.... ..+++.+++.++.|+++||+|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred ceeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 899999999999999997642 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 801 FLEPHSSN---WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 801 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
........ .....++..|+|||++.+..++.++||||||+++|||++ |+.||...... ........ ....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~-~~~~ 243 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-----QILHKIDK-EGER 243 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHT-SCCC
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-----HHHHHHHc-cCCC
Confidence 87554332 223457788999999998889999999999999999999 99998654321 01111111 0111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.+. .. .....+.+++.+||+.||++|||+.++++.|+
T Consensus 244 ~~~-~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 244 LPR-PE---DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp CCC-CT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC-Cc---CcCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 111 11 22356888999999999999999999999885
No 241
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.9e-37 Score=342.28 Aligned_cols=270 Identities=20% Similarity=0.261 Sum_probs=200.3
Q ss_pred CHHHHHHHhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCC-------ChHHHHHHHHHHhhccCCcee
Q 044366 637 LYEEITKATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETA-------NPSEFLNEVLALTEIRHRNII 709 (918)
Q Consensus 637 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv 709 (918)
...++....++|...+.||+|+||.||+|...+|+.||||++.......... ..+.+.+|+++++.++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 3567788889999999999999999999988889999999987643222111 126899999999999999999
Q ss_pred eEecccc-----cCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCee
Q 044366 710 KFHGFCS-----NAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVL 784 (918)
Q Consensus 710 ~~~~~~~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 784 (918)
++++++. .....++||||++ |+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 9999983 3346799999998 5888888754 34589999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeccccccccCCCCCCceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhh
Q 044366 785 LDSEYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSIS 863 (918)
Q Consensus 785 l~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~ 863 (918)
++.++.+||+|||++....... ......|++.|+|||++.+ ..++.++||||+||++|+|++|+.||...... ....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~ 244 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQLN 244 (362)
T ss_dssp ECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHH
T ss_pred EcCCCCEEEEecCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HHHH
Confidence 9999999999999998654332 2344578999999999876 67899999999999999999999998754321 1111
Q ss_pred hhHh----------------hhhhhcccCCCC-CCcchH----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 864 NMII----------------EVNQILDHRLPT-PSRDVT----DKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 864 ~~~~----------------~~~~~~~~~~~~-~~~~~~----~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.... ............ +..... .....+.+++.+||+.||++|||++|+++
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 1100 000001111111 111111 11356889999999999999999999985
No 242
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.2e-37 Score=341.46 Aligned_cols=256 Identities=21% Similarity=0.353 Sum_probs=204.8
Q ss_pred hcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCC-------------ChHHHHHHHHHHhhccCCceeeE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETA-------------NPSEFLNEVLALTEIRHRNIIKF 711 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~-------------~~~~~~~e~~~l~~l~h~niv~~ 711 (918)
.++|.+.+.||+|+||.||+|.. +|+.||||++.......... ..+.+.+|+++++.++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999987 99999999987643322110 01789999999999999999999
Q ss_pred ecccccCCceEEEEEeccCCChhHH------hhcccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEcCCCCCCee
Q 044366 712 HGFCSNAQHSFIVCEYLARGSLTTI------LRDDAAAKEFSWNQRMNVIKGVANALSYLHH-DCIPPIVHRDISSKNVL 784 (918)
Q Consensus 712 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nil 784 (918)
++++.+++..++||||+++|+|.++ +.... ...+++..++.++.|++.||+|||+ . +++||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999999 54321 3568999999999999999999999 8 9999999999999
Q ss_pred eCCCCcEEEeccccccccCCCCCCceecccccccccccccccC-CCCc-ccchhhHHHHHHHHHhCCCCCCcchhhhhhh
Q 044366 785 LDSEYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTM-RATE-KYDVYSFGVLALEVIKGYHPGDFVSTIFSSI 862 (918)
Q Consensus 785 l~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~ 862 (918)
++.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||||+++|||++|+.||..........
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 262 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHH
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence 999999999999999876543 33446789999999999877 5666 9999999999999999999987543311111
Q ss_pred hhhHhhhhhhcccCCCCCC---------------cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 863 SNMIIEVNQILDHRLPTPS---------------RDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.. +.......+. .........+.+++.+||+.||.+|||++|+++
T Consensus 263 ~~-------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 263 NN-------IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HH-------HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HH-------HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11 1111111000 000122356889999999999999999999986
No 243
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.8e-37 Score=343.48 Aligned_cols=258 Identities=23% Similarity=0.316 Sum_probs=201.8
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|... +|+.||+|++.... .....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 108 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 108 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEE
Confidence 357889999999999999999654 79999999987532 22235678999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||++....
T Consensus 109 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 109 CMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp EECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EEECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999999997643 4899999999999999999999832 89999999999999999999999999997653
Q ss_pred CCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhh-------------------
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISN------------------- 864 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~------------------- 864 (918)
.. ......||+.|+|||++.+..++.++||||||+++|||++|+.||............
T Consensus 184 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 184 DS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp HH--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred cc--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 22 123457899999999999999999999999999999999999998653321100000
Q ss_pred ---------------hHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 865 ---------------MIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 865 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.............+.... ......+.+++.+||+.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPS--GVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCCCCCCT--TTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CcccccccCCCCcccchhhhhHHhccCCCCCCc--ccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000000111111111110 112346889999999999999999999975
No 244
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=341.40 Aligned_cols=251 Identities=22% Similarity=0.338 Sum_probs=185.7
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc-CCceeeEeccc------
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR-HRNIIKFHGFC------ 715 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~------ 715 (918)
...+|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.+++++. ||||+++++++
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~ 101 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN----EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEE 101 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES----SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTT
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC----chHHHHHHHHHHHHHHHhccCCChhhccccccccccc
Confidence 345789999999999999999965 57999999998543 2233567899999999996 99999999988
Q ss_pred --ccCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEcCCCCCCeeeCCCCcE
Q 044366 716 --SNAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPP--IVHRDISSKNVLLDSEYEA 791 (918)
Q Consensus 716 --~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~ 791 (918)
......++||||++ |+|.+++........+++.+++.++.||+.||+|||+. + |+||||||+||+++.++.+
T Consensus 102 ~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~ 177 (337)
T 3ll6_A 102 SDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTI 177 (337)
T ss_dssp STTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCE
T ss_pred cccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCE
Confidence 33455899999996 69999997654455699999999999999999999998 8 9999999999999999999
Q ss_pred EEeccccccccCCCCCC------------ceeccccccccccccc---ccCCCCcccchhhHHHHHHHHHhCCCCCCcch
Q 044366 792 HVSDFGFAKFLEPHSSN------------WTEFAGTVGYAAPELA---YTMRATEKYDVYSFGVLALEVIKGYHPGDFVS 856 (918)
Q Consensus 792 kl~DfG~~~~~~~~~~~------------~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~ 856 (918)
||+|||++......... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||....
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 257 (337)
T 3ll6_A 178 KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257 (337)
T ss_dssp EBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred EEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchh
Confidence 99999999876543221 1134589999999998 56678899999999999999999999986432
Q ss_pred hhhhhhhhhHhhhhhhcccCCCC-CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 857 TIFSSISNMIIEVNQILDHRLPT-PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.. ......... ..... ...+.+++.+||+.||++|||++|+++.|+
T Consensus 258 ~~------------~~~~~~~~~~~~~~~---~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 258 KL------------RIVNGKYSIPPHDTQ---YTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp --------------------CCCCTTCCS---SGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HH------------HhhcCcccCCccccc---chHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 21 001111111 11111 134778899999999999999999999885
No 245
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.8e-37 Score=332.78 Aligned_cols=255 Identities=22% Similarity=0.333 Sum_probs=187.0
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|+..+.||+|+||.||+|.. .+|+.||||+++..... ....+.+.++...++.++||||+++++++.+++..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS--QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CH--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc--HHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 46789999999999999999965 57999999998753211 1112334455555788899999999999999999999
Q ss_pred EEEeccCCChhHHhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 724 VCEYLARGSLTTILRDD-AAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
||||+++ +|.+++... .....+++..++.++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++...
T Consensus 84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9999984 888887653 22356899999999999999999999853 8999999999999999999999999999876
Q ss_pred CCCCCCceeccccccccccccc----ccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCC
Q 044366 803 EPHSSNWTEFAGTVGYAAPELA----YTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLP 878 (918)
Q Consensus 803 ~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (918)
..... .....|++.|+|||++ .+..++.++||||+|+++|||++|+.||+............ .....+
T Consensus 161 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-------~~~~~~ 232 (290)
T 3fme_A 161 VDDVA-KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV-------VEEPSP 232 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH-------HHSCCC
T ss_pred ccccc-ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHH-------hccCCC
Confidence 54322 2334689999999996 56678999999999999999999999987543322221111 111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 879 TPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 879 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.... ......+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 233 QLPA--DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CCCT--TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred Cccc--ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1111 112346888999999999999999999976
No 246
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=7e-37 Score=345.48 Aligned_cols=199 Identities=22% Similarity=0.278 Sum_probs=172.2
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc------cCCceeeEeccccc
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI------RHRNIIKFHGFCSN 717 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~ 717 (918)
..+|.+.+.||+|+||.||+|.. .+++.||||+++.. ......+.+|+.+++.+ +|+||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc
Confidence 46799999999999999999954 56899999998652 12245678888888877 56799999999999
Q ss_pred CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCc--EEEec
Q 044366 718 AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYE--AHVSD 795 (918)
Q Consensus 718 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~D 795 (918)
.+..++||||++ ++|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 171 ~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 171 RNHICMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp TTEEEEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECC
T ss_pred CCeEEEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEee
Confidence 999999999996 59999987654 24489999999999999999999999 9999999999999999987 99999
Q ss_pred cccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcch
Q 044366 796 FGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVS 856 (918)
Q Consensus 796 fG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~ 856 (918)
||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 246 FG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 246 FGSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CTTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 9999765433 234578999999999999999999999999999999999999986543
No 247
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5.4e-37 Score=328.31 Aligned_cols=255 Identities=24% Similarity=0.330 Sum_probs=205.2
Q ss_pred HHHhcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCc
Q 044366 642 TKATGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH 720 (918)
Q Consensus 642 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 720 (918)
....++|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+.
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 95 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA--KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS 95 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB--SSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc--chHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCe
Confidence 344578999999999999999999654 799999999876432 23456789999999999999999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCC---CcEEEeccc
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSE---YEAHVSDFG 797 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~DfG 797 (918)
.++||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +++||||||+||+++.+ +.+||+|||
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg 169 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG 169 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred EEEEEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccC
Confidence 999999999999999887543 489999999999999999999999 99999999999999764 469999999
Q ss_pred cccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
++....... ......|++.|+|||.+.+ .++.++||||||+++|+|++|+.||...... .. .. .+.....
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~----~~---~~~~~~~ 239 (287)
T 2wei_A 170 LSTCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DI----LK---RVETGKY 239 (287)
T ss_dssp GGGTBCCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HH----HH---HHHHCCC
T ss_pred cceeecCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-HH----HH---HHHcCCC
Confidence 998765432 2234568999999998876 4889999999999999999999998654321 11 11 1111111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.............+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 240 AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 1111111223356889999999999999999999986
No 248
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=8.3e-38 Score=347.40 Aligned_cols=256 Identities=11% Similarity=0.037 Sum_probs=180.0
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc--cCCceeeEec-------cc
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI--RHRNIIKFHG-------FC 715 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~-------~~ 715 (918)
.+|...+.||+|+||.||+|.. .+|+.||||++...... .....+.+.+|+.+++.+ +||||++++. ++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 4588899999999999999965 47899999999764221 112245677885555555 6999887553 33
Q ss_pred ccC-----------------CceEEEEEeccCCChhHHhhcccccCCCCHHHH------HHHHHHHHHHHHHHHhCCCCC
Q 044366 716 SNA-----------------QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQR------MNVIKGVANALSYLHHDCIPP 772 (918)
Q Consensus 716 ~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~~ 772 (918)
... ...++||||++ |+|.+++..... .+++..+ +.++.||+.||+|||+. +
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 221 34799999999 899999986522 2455556 78889999999999999 9
Q ss_pred eEEcCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCC
Q 044366 773 IVHRDISSKNVLLDSEYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYT--MRATEKYDVYSFGVLALEVIKGYH 850 (918)
Q Consensus 773 ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~vl~el~tg~~ 850 (918)
|+||||||+||+++.++.+||+|||+++..... .....+++.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999876432 224567799999999987 678999999999999999999999
Q ss_pred CCCcchhhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 851 PGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 851 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
||.............. ............+ ........+.+++.+||+.||++|||++|+++
T Consensus 292 Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKGSWKRP-SLRVPGTDSLAFG--SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTTCCCBC-CTTSCCCCSCCCT--TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCcccccchhhh-hhhhccccccchh--hccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9875432111000000 0000001111111 01122356888999999999999999999874
No 249
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.5e-37 Score=343.31 Aligned_cols=256 Identities=20% Similarity=0.311 Sum_probs=181.7
Q ss_pred hcCCCCceeeccccceEEEEEE-eCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccC-----
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAE-LPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNA----- 718 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 718 (918)
.++|...+.||+|+||.||+|. ..+|+.||||++.... ......+.+.+|+++++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 4789999999999999999995 4679999999986532 1222356788999999999999999999988543
Q ss_pred -CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccc
Q 044366 719 -QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFG 797 (918)
Q Consensus 719 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 797 (918)
...++|+||+ +++|.++++. ..+++..++.++.||++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecc
Confidence 5679999999 6799998865 3489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhh--------
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIE-------- 868 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~-------- 868 (918)
+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........
T Consensus 178 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~ 253 (367)
T 2fst_X 178 LARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAEL 253 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHH
T ss_pred cccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHH
Confidence 99875432 344678999999999877 678999999999999999999999986543211 11110000
Q ss_pred --------hhhhcccCCCCCCcchH----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 869 --------VNQILDHRLPTPSRDVT----DKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 869 --------~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
...........+..... .....+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00000000000111111 11356889999999999999999999975
No 250
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.6e-37 Score=340.63 Aligned_cols=259 Identities=23% Similarity=0.279 Sum_probs=194.4
Q ss_pred HHHhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc---
Q 044366 642 TKATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN--- 717 (918)
Q Consensus 642 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--- 717 (918)
+...++|...+.||+|+||.||+|.. .+|+.||||++.... ....+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 74 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP--------RYKNRELDIMKVLDHVNIIKLVDYFYTTGD 74 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT--------TSCCHHHHHHTTCCCTTBCCEEEEEEEC--
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc--------chHHHHHHHHHHcCCCCccchhheeeecCc
Confidence 44567899999999999999999954 689999999986431 112479999999999999999998833
Q ss_pred -----------------------------------CCceEEEEEeccCCChhHHhhcc-cccCCCCHHHHHHHHHHHHHH
Q 044366 718 -----------------------------------AQHSFIVCEYLARGSLTTILRDD-AAAKEFSWNQRMNVIKGVANA 761 (918)
Q Consensus 718 -----------------------------------~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~ 761 (918)
....++||||++ |+|.+.+... .....+++..++.++.|+++|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~a 153 (383)
T 3eb0_A 75 EEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRA 153 (383)
T ss_dssp -----------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 334789999998 4888877643 224568999999999999999
Q ss_pred HHHHHhCCCCCeEEcCCCCCCeeeC-CCCcEEEeccccccccCCCCCCceecccccccccccccccC-CCCcccchhhHH
Q 044366 762 LSYLHHDCIPPIVHRDISSKNVLLD-SEYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTM-RATEKYDVYSFG 839 (918)
Q Consensus 762 l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG 839 (918)
|+|||+. +|+||||||+||+++ .++.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+|
T Consensus 154 L~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 229 (383)
T 3eb0_A 154 VGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-SVAYICSRFYRAPELMLGATEYTPSIDLWSIG 229 (383)
T ss_dssp HHHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHH
T ss_pred HHHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-CcCcccCCCccCHHHhcCCCCCCcchhhhhHH
Confidence 9999999 999999999999997 688999999999987754433 2345789999999998765 489999999999
Q ss_pred HHHHHHHhCCCCCCcchhhhhhhhhhHh--------hhhh----hcccCCCCCC-cchHH-----HHHHHHHHHHHcccC
Q 044366 840 VLALEVIKGYHPGDFVSTIFSSISNMII--------EVNQ----ILDHRLPTPS-RDVTD-----KLRSIMEVAILCLVE 901 (918)
Q Consensus 840 ~vl~el~tg~~p~~~~~~~~~~~~~~~~--------~~~~----~~~~~~~~~~-~~~~~-----~~~~l~~li~~cl~~ 901 (918)
|++|||++|+.||........ ...... .... ......+... ..... ....+.+++.+||+.
T Consensus 230 ~il~ell~g~~pf~~~~~~~~-~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (383)
T 3eb0_A 230 CVFGELILGKPLFSGETSIDQ-LVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY 308 (383)
T ss_dssp HHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccC
Confidence 999999999999875433211 111100 0000 0000111110 11111 234588999999999
Q ss_pred CCCCCCCHHHHHH
Q 044366 902 NPEARPTMKEVCN 914 (918)
Q Consensus 902 dp~~RPt~~evl~ 914 (918)
||++|||+.|+++
T Consensus 309 dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 309 EPDLRINPYEAMA 321 (383)
T ss_dssp SGGGSCCHHHHHT
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999974
No 251
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.8e-37 Score=340.33 Aligned_cols=258 Identities=20% Similarity=0.285 Sum_probs=198.5
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccC-----
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNA----- 718 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 718 (918)
.++|...+.||+|+||.||+|.. .+++.||||++... ......+.+.+|++++++++||||+++++++...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 102 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF---EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT---TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc---cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcccc
Confidence 46899999999999999999954 47889999998642 1222346789999999999999999999998654
Q ss_pred CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccc
Q 044366 719 QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGF 798 (918)
Q Consensus 719 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 798 (918)
...++||||+++ +|.++++.. .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~iv~e~~~~-~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 103 KDVYIVQDLMET-DLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp CCEEEEEECCSE-EHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEcccCc-CHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcc
Confidence 468999999984 999998753 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC---Cceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhh------
Q 044366 799 AKFLEPHSS---NWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIE------ 868 (918)
Q Consensus 799 ~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~------ 868 (918)
++....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 253 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQ 253 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCH
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCH
Confidence 987654322 1244578999999998754 458999999999999999999999986543211 11110000
Q ss_pred --h--------hhhcccCCCCCCcch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 869 --V--------NQILDHRLPTPSRDV----TDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 869 --~--------~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
. ............... ......+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 000000000000001 112356889999999999999999999985
No 252
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=9.8e-37 Score=340.70 Aligned_cols=257 Identities=22% Similarity=0.269 Sum_probs=193.1
Q ss_pred hcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCC-----
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQ----- 719 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 719 (918)
..+|...+.||+|+||.||+|+...+..||+|++.... ....+|+++++.++||||+++++++...+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~--------~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~ 110 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK--------RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDE 110 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT--------TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSC
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc--------chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCc
Confidence 45789999999999999999988777779999875421 11237999999999999999999984433
Q ss_pred -ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeC-CCCcEEEeccc
Q 044366 720 -HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLD-SEYEAHVSDFG 797 (918)
Q Consensus 720 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~DfG 797 (918)
..++||||++++.+............+++..++.++.||++||+|||+. +|+||||||+||+++ .++.+||+|||
T Consensus 111 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 111 VFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 3789999998754443332222345689999999999999999999999 999999999999999 78999999999
Q ss_pred cccccCCCCCCceecccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHh---------
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAYTM-RATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMII--------- 867 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~--------- 867 (918)
+++....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||........ ......
T Consensus 188 ~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-l~~i~~~~g~p~~~~ 265 (394)
T 4e7w_A 188 SAKILIAGEP-NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ-LVEIIKVLGTPSREQ 265 (394)
T ss_dssp TCEECCTTCC-CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHH
T ss_pred CcccccCCCC-CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHH
Confidence 9987654333 2345789999999998765 589999999999999999999999875432211 111000
Q ss_pred --hh-hhhcccCCCCCCc-chHH-----HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 868 --EV-NQILDHRLPTPSR-DVTD-----KLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 868 --~~-~~~~~~~~~~~~~-~~~~-----~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.. ........+.... .... ....+.+++.+||+.||++|||+.|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 00 0011111111111 1111 2357889999999999999999999975
No 253
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.9e-36 Score=337.71 Aligned_cols=311 Identities=21% Similarity=0.190 Sum_probs=177.9
Q ss_pred ccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEE
Q 044366 164 LKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLS 243 (918)
Q Consensus 164 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 243 (918)
++++++|++++|.++.+++..|..+++|++|++++|.+++..+..|..+++|++|++++|.+++..|..|.++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 45555566666555555444455555555555555555554445555555555555555555555555555555555555
Q ss_pred cccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccC
Q 044366 244 LFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYG 323 (918)
Q Consensus 244 Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 323 (918)
+++|+++.+++..|..+++|++|++++|++.+..+..|..+++|+.|++++|++ ..
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l------------------------~~ 179 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL------------------------TH 179 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCC------------------------SB
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcC------------------------Cc
Confidence 555555544444445555555555555555544444444444444444444444 33
Q ss_pred ccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchhh
Q 044366 324 KVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVK 403 (918)
Q Consensus 324 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 403 (918)
++ +..+++|+.|++++|.+... ...++|+.|++++|.+..... . .
T Consensus 180 ~~---~~~l~~L~~L~l~~n~l~~~-----------------------------~~~~~L~~L~l~~n~l~~~~~-~--~ 224 (390)
T 3o6n_A 180 VD---LSLIPSLFHANVSYNLLSTL-----------------------------AIPIAVEELDASHNSINVVRG-P--V 224 (390)
T ss_dssp CC---GGGCTTCSEEECCSSCCSEE-----------------------------ECCSSCSEEECCSSCCCEEEC-C--C
T ss_pred cc---cccccccceeeccccccccc-----------------------------CCCCcceEEECCCCeeeeccc-c--c
Confidence 32 22334555555555544311 111234444555554443211 1 1
Q ss_pred ccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEe
Q 044366 404 LFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELD 483 (918)
Q Consensus 404 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 483 (918)
.++|+.|++++|++++. ..+..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|++|+
T Consensus 225 ~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~ 301 (390)
T 3o6n_A 225 NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLD 301 (390)
T ss_dssp CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEE
T ss_pred cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEE
Confidence 23555555555555432 345666677777777777776666777777777777777777764 455556677777777
Q ss_pred ccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCC
Q 044366 484 LSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGP 540 (918)
Q Consensus 484 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 540 (918)
|++|+++ .+|..+..+++|+.|+|++|+++++. +..+++|+.|++++|+|+|.
T Consensus 302 L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 302 LSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCcce-ecCccccccCcCCEEECCCCccceeC---chhhccCCEEEcCCCCccch
Confidence 7777776 45556667777777777777776642 55667777788888877764
No 254
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=6.5e-37 Score=330.64 Aligned_cols=250 Identities=24% Similarity=0.418 Sum_probs=191.0
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc------
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN------ 717 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------ 717 (918)
.++|+..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+++++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence 46788999999999999999965 57999999998642 1235678999999999999999999998744
Q ss_pred -------CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCc
Q 044366 718 -------AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYE 790 (918)
Q Consensus 718 -------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 790 (918)
.+..++||||+++|+|.+++.... ..+++.+++.++.|+++||+|||+. +++||||||+||+++.++.
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ------CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred hhcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 456899999999999999997542 3478899999999999999999999 9999999999999999999
Q ss_pred EEEeccccccccCCCC--------------CCceecccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcc
Q 044366 791 AHVSDFGFAKFLEPHS--------------SNWTEFAGTVGYAAPELAYTM-RATEKYDVYSFGVLALEVIKGYHPGDFV 855 (918)
Q Consensus 791 ~kl~DfG~~~~~~~~~--------------~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~p~~~~ 855 (918)
+||+|||.+....... .......|++.|+|||++.+. .++.++||||||+++|||++ |+...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 9999999998764321 122345689999999998764 68999999999999999998 43322
Q ss_pred hhhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 856 STIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
...... ....... ....+. .........+.+++.+||+.||.+|||++|+++
T Consensus 232 ~~~~~~----~~~~~~~-~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 232 MERVNI----LKKLRSV-SIEFPP--DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHH----HHHHHST-TCCCCT--TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhHHHH----HHhcccc-ccccCc--cccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 211111 1111111 111111 111222345788999999999999999999986
No 255
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.2e-36 Score=332.39 Aligned_cols=263 Identities=21% Similarity=0.306 Sum_probs=201.9
Q ss_pred HHhcCCCCceeeccccceEEEEEEe--CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc---cCCceeeEecccc-
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAEL--PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI---RHRNIIKFHGFCS- 716 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~- 716 (918)
.+.++|...+.||+|+||.||+|.. .+|+.||+|+++..... ......+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~ 85 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 85 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT--TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc--ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeee
Confidence 3557899999999999999999976 46889999998764322 22234677888887776 8999999999986
Q ss_pred ----cCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEE
Q 044366 717 ----NAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAH 792 (918)
Q Consensus 717 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 792 (918)
.....++||||++ |+|.+++.... ...+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 86 SRTDRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp EECSSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEE
Confidence 5567899999998 69999997653 23489999999999999999999999 999999999999999999999
Q ss_pred EeccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhh-
Q 044366 793 VSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQ- 871 (918)
Q Consensus 793 l~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~- 871 (918)
|+|||+++...... ......|++.|+|||++.+..++.++||||||+++|||++|+.||....... ...........
T Consensus 161 l~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~ 238 (326)
T 1blx_A 161 LADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLP 238 (326)
T ss_dssp ECSCCSCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred EecCcccccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCC
Confidence 99999998664322 2344578999999999999899999999999999999999999987543321 11111100000
Q ss_pred --------------hcccCC-CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 872 --------------ILDHRL-PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 872 --------------~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
...... .............+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000 0000001122356788999999999999999999984
No 256
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=4.4e-37 Score=334.65 Aligned_cols=257 Identities=22% Similarity=0.340 Sum_probs=199.4
Q ss_pred HHHhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCce
Q 044366 642 TKATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 721 (918)
Q Consensus 642 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 721 (918)
....++|...+.||+|+||.||+|.... .||+|+++.... .....+.|.+|+.+++.++||||+++++++.+++..
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 104 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERD--NEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHL 104 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSC--CCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCE
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCC--CHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCce
Confidence 3445788999999999999999998643 499999876422 223345678999999999999999999999999999
Q ss_pred EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 722 FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
++||||+++++|.+++... ...+++.+++.++.|++.||+|||+. +++||||||+||+++ ++.+||+|||+++.
T Consensus 105 ~iv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~ 178 (319)
T 2y4i_B 105 AIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSI 178 (319)
T ss_dssp EEECBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred EEEeecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccc
Confidence 9999999999999999764 24589999999999999999999999 999999999999998 67999999999876
Q ss_pred cCCC-----CCCceeccccccccccccccc---------CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHh
Q 044366 802 LEPH-----SSNWTEFAGTVGYAAPELAYT---------MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMII 867 (918)
Q Consensus 802 ~~~~-----~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~ 867 (918)
.... ........|++.|+|||++.+ ..++.++||||||+++|||++|+.||....... ...
T Consensus 179 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~ 253 (319)
T 2y4i_B 179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA-----IIW 253 (319)
T ss_dssp ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH-----HHH
T ss_pred cccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHH
Confidence 5321 122234568999999999864 347889999999999999999999987543211 111
Q ss_pred hhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 044366 868 EVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLCK 918 (918)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~~ 918 (918)
........... ... ....+.+++.+||+.||++|||++++++.|++
T Consensus 254 ~~~~~~~~~~~--~~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~ 299 (319)
T 2y4i_B 254 QMGTGMKPNLS--QIG---MGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299 (319)
T ss_dssp HHHTTCCCCCC--CSS---CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTT
T ss_pred HhccCCCCCCC--cCC---CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 11111111111 111 12357889999999999999999999999864
No 257
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.1e-36 Score=343.98 Aligned_cols=254 Identities=17% Similarity=0.235 Sum_probs=200.7
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccC-CceeeEecccccCCceE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRH-RNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~ 722 (918)
.++|.+.+.||+|+||.||+|.. .+++.||||++.... ...++..|+++++.++| +++..+..++...+..+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~------~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT------KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC------SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc------ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE
Confidence 46899999999999999999964 679999999876431 12458899999999976 56666666777888899
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeee---CCCCcEEEeccccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLL---DSEYEAHVSDFGFA 799 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfG~~ 799 (918)
+||||+ +++|.+++... ...+++.+++.|+.||+.||+|||+. +||||||||+||++ +.++.+||+|||++
T Consensus 80 lvme~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (483)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEECC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcc
Confidence 999999 88999999754 23589999999999999999999999 99999999999999 57889999999999
Q ss_pred cccCCCCCC-------ceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhh--hhhhhhhHh-hh
Q 044366 800 KFLEPHSSN-------WTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTI--FSSISNMII-EV 869 (918)
Q Consensus 800 ~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~--~~~~~~~~~-~~ 869 (918)
+.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+..... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (483)
T 3sv0_A 154 KKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 233 (483)
T ss_dssp EECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH
T ss_pred eeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc
Confidence 877654322 12567899999999999999999999999999999999999998754321 111111000 00
Q ss_pred hhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 870 NQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
....... ......++.+++..||+.||++||++++|++.|+
T Consensus 234 ~~~~~~l-------~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 234 ATSIEAL-------CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274 (483)
T ss_dssp HSCHHHH-------HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred cccHHHH-------hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 0000000 0011246889999999999999999999999875
No 258
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=8.8e-37 Score=338.28 Aligned_cols=266 Identities=20% Similarity=0.209 Sum_probs=190.3
Q ss_pred HHHHHHHhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccc
Q 044366 638 YEEITKATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCS 716 (918)
Q Consensus 638 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 716 (918)
........++|.+.+.||+|+||.||+|.. .+|+.||||++... ......+.+|++.++.++||||+++++++.
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~~~~l~~l~h~niv~~~~~~~ 89 (360)
T 3e3p_A 15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-----PRFRNRELQIMQDLAVLHHPNIVQLQSYFY 89 (360)
T ss_dssp SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-----TTCCCHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-----ccccHHHHHHHHHHHhcCCCCcccHHHhhh
Confidence 345677889999999999999999999965 57999999988542 223456788888899999999999999985
Q ss_pred cCCc-------eEEEEEeccCCChhHHhhc-ccccCCCCHHHHHHHHHHHHHHHHHHH--hCCCCCeEEcCCCCCCeeeC
Q 044366 717 NAQH-------SFIVCEYLARGSLTTILRD-DAAAKEFSWNQRMNVIKGVANALSYLH--HDCIPPIVHRDISSKNVLLD 786 (918)
Q Consensus 717 ~~~~-------~~lv~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~~~ivH~dlk~~Nill~ 786 (918)
..+. .++||||+++ ++.+.+.. ......+++..++.++.|++.|++||| +. +|+||||||+||+++
T Consensus 90 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~ 165 (360)
T 3e3p_A 90 TLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVN 165 (360)
T ss_dssp EECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEE
T ss_pred ccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEe
Confidence 4332 7899999986 55554432 223455899999999999999999999 87 999999999999999
Q ss_pred C-CCcEEEeccccccccCCCCCCceecccccccccccccccCC-CCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhh
Q 044366 787 S-EYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMR-ATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISN 864 (918)
Q Consensus 787 ~-~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~ 864 (918)
. ++.+||+|||+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||....... ....
T Consensus 166 ~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~ 243 (360)
T 3e3p_A 166 EADGTLKLCDFGSAKKLSPSEP-NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG-QLHE 243 (360)
T ss_dssp TTTTEEEECCCTTCBCCCTTSC-CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred CCCCcEEEeeCCCceecCCCCC-cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH-HHHH
Confidence 7 89999999999987764332 23457899999999987654 8999999999999999999999987543221 1111
Q ss_pred hHhh-------hhhhcccCC-----C-CCCcch--------HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 865 MIIE-------VNQILDHRL-----P-TPSRDV--------TDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 865 ~~~~-------~~~~~~~~~-----~-~~~~~~--------~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.... ......... . ...... ......+.+++.+||+.||.+|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 244 IVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1000 000000000 0 000000 012457889999999999999999999975
No 259
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.7e-36 Score=336.40 Aligned_cols=255 Identities=22% Similarity=0.324 Sum_probs=195.0
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCce--
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHS-- 721 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-- 721 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 118 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ--SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 118 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc--chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence 46888999999999999999954 5799999999875321 122246789999999999999999999999776654
Q ss_pred ----EEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccc
Q 044366 722 ----FIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFG 797 (918)
Q Consensus 722 ----~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 797 (918)
++||||++ ++|.+++.. .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999998 588888743 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhh--------
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIE-------- 868 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~-------- 868 (918)
+++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||....... ........
T Consensus 190 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~ 265 (371)
T 4exu_A 190 LARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEF 265 (371)
T ss_dssp CC-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHH
T ss_pred cccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHHH
Confidence 99865432 234578999999999887 678999999999999999999999987543211 11111000
Q ss_pred --------hhhhcccCCCCCCcchH----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 869 --------VNQILDHRLPTPSRDVT----DKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 869 --------~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
................. .....+.+++.+||+.||++|||++|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00000000111111111 12357889999999999999999999975
No 260
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=6.7e-37 Score=344.25 Aligned_cols=258 Identities=21% Similarity=0.270 Sum_probs=198.2
Q ss_pred hcCCCCceeeccccceEEEEEE-eCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc--------CCceeeEeccc
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAE-LPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR--------HRNIIKFHGFC 715 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~ 715 (918)
.++|.+.+.||+|+||.||+|. ..+++.||||+++.. ....+.+.+|+++++.++ |+||+++++++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 4789999999999999999995 457899999998642 223467899999999986 78899999998
Q ss_pred c----cCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCC--
Q 044366 716 S----NAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEY-- 789 (918)
Q Consensus 716 ~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-- 789 (918)
. .+...++||||+ ++++.+++.... ...+++.+++.++.||+.||+|||+++ +|+||||||+||+++.++
T Consensus 111 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 111 KISGVNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp EEEETTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred eecCCCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 6 566889999999 456666665432 245899999999999999999999964 899999999999999775
Q ss_pred -----------------------------------------------cEEEeccccccccCCCCCCceeccccccccccc
Q 044366 790 -----------------------------------------------EAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPE 822 (918)
Q Consensus 790 -----------------------------------------------~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE 822 (918)
.+||+|||.++..... .....||+.|+|||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE 263 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLE 263 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHH
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCCh
Confidence 7999999999876543 23457899999999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhh-----hhhhhhHhhhh--------------hhccc-----CCC
Q 044366 823 LAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIF-----SSISNMIIEVN--------------QILDH-----RLP 878 (918)
Q Consensus 823 ~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~-----~~~~~~~~~~~--------------~~~~~-----~~~ 878 (918)
++.+..++.++|||||||++|||++|+.||....... ........... ..... ...
T Consensus 264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1wak_A 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHIT 343 (397)
T ss_dssp HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccc
Confidence 9999999999999999999999999999986432110 00000000000 00000 000
Q ss_pred C------------CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 879 T------------PSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 879 ~------------~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
. ...........+.+++.+||+.||++|||++|+++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 344 KLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0 00112345567899999999999999999999985
No 261
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=345.30 Aligned_cols=199 Identities=20% Similarity=0.355 Sum_probs=154.3
Q ss_pred CCCC-ceeeccccceEEEEEEeC---CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccc--ccCCc
Q 044366 647 NFGE-KYCIGKGGQRSVYKAELP---SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFC--SNAQH 720 (918)
Q Consensus 647 ~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~--~~~~~ 720 (918)
.|.. .++||+|+||.||+|+.. +++.||||++... .....+.+|+++++.++||||+++++++ ..+..
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT------GISMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS------SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC------CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 3544 457999999999999764 5789999998642 2235789999999999999999999998 45778
Q ss_pred eEEEEEeccCCChhHHhhccc------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeee----CCCCc
Q 044366 721 SFIVCEYLARGSLTTILRDDA------AAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLL----DSEYE 790 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~ 790 (918)
.++||||+++ +|.+++.... ....+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.
T Consensus 95 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCc
Confidence 9999999975 8888876432 123489999999999999999999999 99999999999999 67789
Q ss_pred EEEeccccccccCCCC---CCceecccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcc
Q 044366 791 AHVSDFGFAKFLEPHS---SNWTEFAGTVGYAAPELAYTM-RATEKYDVYSFGVLALEVIKGYHPGDFV 855 (918)
Q Consensus 791 ~kl~DfG~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~p~~~~ 855 (918)
+||+|||+++.+.... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 9999999998775432 223446789999999998874 5899999999999999999999998643
No 262
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5.1e-37 Score=337.12 Aligned_cols=255 Identities=22% Similarity=0.343 Sum_probs=198.8
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHH-HhhccCCceeeEecccccCCce
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLA-LTEIRHRNIIKFHGFCSNAQHS 721 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~ 721 (918)
..++|...+.||+|+||.||+|.. .+|+.||||+++... ......++..|... ++.++||||+++++++.+++..
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 125 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV---NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 125 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCC---CCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEecccc---CcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcE
Confidence 446788889999999999999965 579999999987532 12223456666665 7778999999999999999999
Q ss_pred EEEEEeccCCChhHHhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 722 FIVCEYLARGSLTTILRDD-AAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 722 ~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
++||||+++ +|.+++... .....+++..++.++.||+.||+|||+.. +|+||||||+||+++.++.+||+|||+++
T Consensus 126 ~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 126 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 999999985 999988753 12456899999999999999999999742 89999999999999999999999999998
Q ss_pred ccCCCCCCceecccccccccccccc----cCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELAY----TMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||+........... .....
T Consensus 203 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~-------~~~~~ 274 (340)
T 3an0_A 203 YLVDSV-AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ-------VVEEP 274 (340)
T ss_dssp HHSCHH-HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH-------HHHSC
T ss_pred eccccc-ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHH-------HhcCC
Confidence 765321 122346899999999964 346889999999999999999999998754322211111 11111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 877 LPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 877 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 275 ~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 275 SPQLPA--DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CCCCCG--GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCc--ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111111 122356889999999999999999999975
No 263
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.3e-36 Score=342.56 Aligned_cols=255 Identities=24% Similarity=0.319 Sum_probs=191.8
Q ss_pred cCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc------C
Q 044366 646 GNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN------A 718 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~ 718 (918)
.+|...+.||+|+||.||+|.. .+|+.||||++.... ..+.+|+++++.++||||+++++++.. .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~--------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT--------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc--------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 4688889999999999999976 469999999986421 123479999999999999999998743 2
Q ss_pred CceEEEEEeccCCChhHHhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCC-CcEEEecc
Q 044366 719 QHSFIVCEYLARGSLTTILRDD-AAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSE-YEAHVSDF 796 (918)
Q Consensus 719 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Df 796 (918)
...++||||+++ ++.+.+... .....+++..++.++.||++||+|||+. +|+||||||+||+++.+ +.+||+||
T Consensus 126 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DF 201 (420)
T 1j1b_A 126 VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDF 201 (420)
T ss_dssp EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccc
Confidence 236799999986 676666432 2245689999999999999999999999 99999999999999965 56899999
Q ss_pred ccccccCCCCCCceecccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHh--------
Q 044366 797 GFAKFLEPHSSNWTEFAGTVGYAAPELAYTM-RATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMII-------- 867 (918)
Q Consensus 797 G~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~-------- 867 (918)
|+++.+..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .+.....
T Consensus 202 G~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-~l~~i~~~lg~p~~~ 279 (420)
T 1j1b_A 202 GSAKQLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTRE 279 (420)
T ss_dssp TTCEECCTTCC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHH
T ss_pred hhhhhcccCCC-ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHH
Confidence 99987654332 2345789999999998764 78999999999999999999999987543221 1111110
Q ss_pred hhhhh----cccCCCCCCcc-hH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 868 EVNQI----LDHRLPTPSRD-VT-----DKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 868 ~~~~~----~~~~~~~~~~~-~~-----~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.+... .....+..... +. .....+.+++.+||+.||++|||+.|+++
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 00000 00011111111 11 11357889999999999999999999975
No 264
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.5e-36 Score=329.17 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=195.8
Q ss_pred HHhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc--CCceeeEecccccCCc
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR--HRNIIKFHGFCSNAQH 720 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~ 720 (918)
...++|.+.+.||+|+||.||+|...+|+.||||++..... .....+.+.+|++++++++ ||||+++++++..++.
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc--cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 44567999999999999999999888899999999865321 2223567899999999997 5999999999999999
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
.++||| +.+++|.+++.... .+++.+++.++.|+++||+|||+. +|+||||||+||++++ +.+||+|||++.
T Consensus 103 ~~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~ 174 (313)
T 3cek_A 103 IYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIAN 174 (313)
T ss_dssp EEEEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSC
T ss_pred EEEEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccc
Confidence 999999 56789999998643 589999999999999999999999 9999999999999964 899999999998
Q ss_pred ccCCCCCC--ceeccccccccccccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHh
Q 044366 801 FLEPHSSN--WTEFAGTVGYAAPELAYT-----------MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMII 867 (918)
Q Consensus 801 ~~~~~~~~--~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~ 867 (918)
........ .....|++.|+|||++.+ ..++.++||||||+++|||++|+.||..........
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~----- 249 (313)
T 3cek_A 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL----- 249 (313)
T ss_dssp C--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH-----
T ss_pred cccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHH-----
Confidence 76543321 234568999999999865 467889999999999999999999986543221111
Q ss_pred hhhhhcccCCC-CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 868 EVNQILDHRLP-TPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 868 ~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
....+.... ...... ...+.+++.+||+.||++||+++|+++
T Consensus 250 --~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 250 --HAIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp --HHHHCTTSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --HHHHhcccccCCcccc---hHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111111111 111111 246788999999999999999999985
No 265
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.2e-36 Score=332.92 Aligned_cols=252 Identities=21% Similarity=0.283 Sum_probs=172.7
Q ss_pred HhcCCCCce-eeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHH-HHhhccCCceeeEeccccc---
Q 044366 644 ATGNFGEKY-CIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVL-ALTEIRHRNIIKFHGFCSN--- 717 (918)
Q Consensus 644 ~~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~--- 717 (918)
..++|.+.+ .||+|+||.||+|... +|+.||||++... ....+|+. .++.++||||+++++++..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 96 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---------PKARQEVDHHWQASGGPHIVCILDVYENMHH 96 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---------HHHHHHHHHHHHhcCCCChHHHHHHHhhccC
Confidence 456788854 6999999999999654 7999999998542 12233333 4566799999999999865
Q ss_pred -CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCC---CcEEE
Q 044366 718 -AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSE---YEAHV 793 (918)
Q Consensus 718 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl 793 (918)
+...++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.+ +.+||
T Consensus 97 ~~~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl 172 (336)
T 3fhr_A 97 GKRCLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKL 172 (336)
T ss_dssp TEEEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEE
T ss_pred CCceEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEE
Confidence 456899999999999999998653 34589999999999999999999999 99999999999999864 55999
Q ss_pred eccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhc
Q 044366 794 SDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQIL 873 (918)
Q Consensus 794 ~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 873 (918)
+|||++...... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||......... .... ....
T Consensus 173 ~Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~--~~~~ 246 (336)
T 3fhr_A 173 TDFGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS--PGMK--RRIR 246 (336)
T ss_dssp CCCTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------
T ss_pred eccccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh--hhHH--Hhhh
Confidence 999999876532 223456899999999998888999999999999999999999998644321100 0000 0011
Q ss_pred ccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 874 DHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 874 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
......+..........+.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 247 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ----CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111111111223356888999999999999999999986
No 266
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.2e-36 Score=336.32 Aligned_cols=258 Identities=23% Similarity=0.321 Sum_probs=196.6
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccC-----
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNA----- 718 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 718 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++... ........+.+|+++++.++||||+++++++..+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 86 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF 86 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc---ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence 46889999999999999999965 47899999998642 1222345788999999999999999999987654
Q ss_pred CceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccc
Q 044366 719 QHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGF 798 (918)
Q Consensus 719 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 798 (918)
...++||||++ |+|.+++... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 67899999997 5999998753 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC----------ceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHh
Q 044366 799 AKFLEPHSSN----------WTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMII 867 (918)
Q Consensus 799 ~~~~~~~~~~----------~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~ 867 (918)
+......... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ......
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~ 237 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIFG 237 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHH
Confidence 9876533211 123468999999998764 6789999999999999999999999875432110 000000
Q ss_pred h-----------------hhhhcccCCCCCCcc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 868 E-----------------VNQILDHRLPTPSRD----VTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 868 ~-----------------~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
. ..+............ .......+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 000000000000000 0122356889999999999999999999986
No 267
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.4e-36 Score=330.63 Aligned_cols=257 Identities=18% Similarity=0.265 Sum_probs=200.4
Q ss_pred hcCCCCceeeccccceEEEEEEe--CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCc------eeeEecccc
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL--PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRN------IIKFHGFCS 716 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~ 716 (918)
.++|.+.+.||+|+||.||+|.. .+|+.||||+++.. ....+.+.+|+++++.++|++ ++++++++.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence 46899999999999999999964 46889999998642 122467889999999997765 999999999
Q ss_pred cCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC---------
Q 044366 717 NAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS--------- 787 (918)
Q Consensus 717 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--------- 787 (918)
..+..++||||+ +++|.+++.... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 88 ~~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 88 HHGHICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC-
T ss_pred cCCcEEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCC
Confidence 999999999999 789999997653 24589999999999999999999999 9999999999999987
Q ss_pred ----------CCcEEEeccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchh
Q 044366 788 ----------EYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVST 857 (918)
Q Consensus 788 ----------~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~ 857 (918)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred ccccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 668999999999875432 2345789999999999999999999999999999999999999865432
Q ss_pred hhh--hhhhhHh----hh-hhh-----c---ccCCC-----------------CCCcchHHHHHHHHHHHHHcccCCCCC
Q 044366 858 IFS--SISNMII----EV-NQI-----L---DHRLP-----------------TPSRDVTDKLRSIMEVAILCLVENPEA 905 (918)
Q Consensus 858 ~~~--~~~~~~~----~~-~~~-----~---~~~~~-----------------~~~~~~~~~~~~l~~li~~cl~~dp~~ 905 (918)
... .+..... .. ... . ...+. ............+.+++.+||+.||.+
T Consensus 240 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 110 0000000 00 000 0 00000 000111234567899999999999999
Q ss_pred CCCHHHHHH
Q 044366 906 RPTMKEVCN 914 (918)
Q Consensus 906 RPt~~evl~ 914 (918)
|||++|+++
T Consensus 320 Rpt~~ell~ 328 (339)
T 1z57_A 320 RITLREALK 328 (339)
T ss_dssp SCCHHHHTT
T ss_pred ccCHHHHhc
Confidence 999999975
No 268
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=333.72 Aligned_cols=255 Identities=20% Similarity=0.301 Sum_probs=194.3
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCc---
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH--- 720 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--- 720 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 100 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 100 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccc
Confidence 36788899999999999999965 579999999986532 112224678999999999999999999999876654
Q ss_pred ---eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccc
Q 044366 721 ---SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFG 797 (918)
Q Consensus 721 ---~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 797 (918)
.++||||++ |+|.+++.. .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 101 FYDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CCCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecc
Confidence 499999998 588888743 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhh--------
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIE-------- 868 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~-------- 868 (918)
+++..... .....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... .........
T Consensus 172 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~ 247 (353)
T 3coi_A 172 LARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEF 247 (353)
T ss_dssp CTTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHHCBCCHHH
T ss_pred cccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHH
Confidence 99865432 234578999999999876 67899999999999999999999998654321 111110000
Q ss_pred ------------hhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 869 ------------VNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 869 ------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
......................+.+++.+|++.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 248 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000000111111223457889999999999999999999975
No 269
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.6e-36 Score=359.15 Aligned_cols=256 Identities=23% Similarity=0.335 Sum_probs=200.8
Q ss_pred HHHhcCCCCceeeccccceEEEEEEeC----CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc
Q 044366 642 TKATGNFGEKYCIGKGGQRSVYKAELP----SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN 717 (918)
Q Consensus 642 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 717 (918)
+...++|...+.||+|+||.||+|... .+..||||+++... .....+.|.+|+.+++.++||||+++++++.
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~- 461 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVIT- 461 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-
Confidence 344567888899999999999999653 24579999876421 2223467999999999999999999999985
Q ss_pred CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccc
Q 044366 718 AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFG 797 (918)
Q Consensus 718 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 797 (918)
++..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 462 ~~~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG 536 (656)
T 2j0j_A 462 ENPVWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFG 536 (656)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred cCceEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecC
Confidence 456899999999999999997542 3589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCC-CceecccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhhhhccc
Q 044366 798 FAKFLEPHSS-NWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVNQILDH 875 (918)
Q Consensus 798 ~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 875 (918)
+++....... ......+++.|+|||++.+..++.++||||||+++|||++ |..||...... . .... +...
T Consensus 537 ~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-~----~~~~---i~~~ 608 (656)
T 2j0j_A 537 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-D----VIGR---IENG 608 (656)
T ss_dssp CCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-H----HHHH---HHHT
T ss_pred CCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-H----HHHH---HHcC
Confidence 9987654332 2233456789999999998899999999999999999997 99998654321 1 1111 1111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 876 RLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 876 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.....+.. ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 609 ~~~~~~~~---~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 609 ERLPMPPN---CPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp CCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCcc---ccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11111112 2246788999999999999999999999885
No 270
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.2e-36 Score=354.05 Aligned_cols=333 Identities=20% Similarity=0.176 Sum_probs=197.1
Q ss_pred ccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEE
Q 044366 164 LKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLS 243 (918)
Q Consensus 164 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 243 (918)
+++++.|++++|.+..+++..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++.+|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 34555555555555555444455555555555555555554444555555555555555555555444455555555555
Q ss_pred cccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccC
Q 044366 244 LFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYG 323 (918)
Q Consensus 244 Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 323 (918)
|++|.++++++..|..+++|++|++++|.+.+..|..|..+++|+.|++++|.+ ..
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l------------------------~~ 185 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL------------------------TH 185 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCC------------------------SB
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCC------------------------CC
Confidence 555555544444445555555555555555544444444444444444444444 43
Q ss_pred ccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchhh
Q 044366 324 KVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVK 403 (918)
Q Consensus 324 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 403 (918)
++ +..+++|+.|++++|.+... ....+|+.|++++|.+....+..
T Consensus 186 ~~---~~~l~~L~~L~l~~n~l~~l-----------------------------~~~~~L~~L~ls~n~l~~~~~~~--- 230 (597)
T 3oja_B 186 VD---LSLIPSLFHANVSYNLLSTL-----------------------------AIPIAVEELDASHNSINVVRGPV--- 230 (597)
T ss_dssp CC---GGGCTTCSEEECCSSCCSEE-----------------------------ECCTTCSEEECCSSCCCEEECSC---
T ss_pred cC---hhhhhhhhhhhcccCccccc-----------------------------cCCchhheeeccCCccccccccc---
Confidence 32 22334555555555554311 11123555555555554322221
Q ss_pred ccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEe
Q 044366 404 LFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELD 483 (918)
Q Consensus 404 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 483 (918)
.++|+.|+|++|.+++ +..+..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+
T Consensus 231 ~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 307 (597)
T 3oja_B 231 NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLD 307 (597)
T ss_dssp CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEE
T ss_pred CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEE
Confidence 1356666666666654 2456677778888888888877777778888888888888888865 466667778888888
Q ss_pred ccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCCCC--cccccccccCCCCccCC
Q 044366 484 LSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPNS--TAFKNGLMEGNKGLCGN 561 (918)
Q Consensus 484 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~~~~~~~n~~~c~~ 561 (918)
|++|.|+ .+|..+..+++|+.|+|++|+++++. +..+++|+.|++++|+|+|.++.. ..+....+.++...|+.
T Consensus 308 Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 308 LSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp CCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCCCT
T ss_pred CCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccCCc
Confidence 8888887 46677777888888888888887653 566778888888888888764321 12333346677777875
Q ss_pred C
Q 044366 562 F 562 (918)
Q Consensus 562 ~ 562 (918)
.
T Consensus 384 ~ 384 (597)
T 3oja_B 384 D 384 (597)
T ss_dssp T
T ss_pred c
Confidence 3
No 271
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2e-35 Score=330.84 Aligned_cols=317 Identities=21% Similarity=0.230 Sum_probs=281.0
Q ss_pred CCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEE
Q 044366 19 NLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALL 98 (918)
Q Consensus 19 ~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L 98 (918)
.++++++|++++|.++...+..+..+++|++|+|++|++++..|..|..+++|++|++++|.+++..|..|+.+++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46899999999999985555557899999999999999997777799999999999999999998888899999999999
Q ss_pred EccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccC
Q 044366 99 YLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLS 178 (918)
Q Consensus 99 ~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 178 (918)
+|++|++....+..|.++++|++|++++|++++..|..+.++++|++|++++|++++. .++.+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 9999999977666789999999999999999988888999999999999999999865 3677899999999999988
Q ss_pred CcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCcccc
Q 044366 179 GLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIG 258 (918)
Q Consensus 179 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 258 (918)
++ ...++|+.|++++|.+..... ...++|+.|++++|.+++. ..+..+++|++|++++|.+++..|..+.
T Consensus 200 ~~-----~~~~~L~~L~l~~n~l~~~~~---~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (390)
T 3o6n_A 200 TL-----AIPIAVEELDASHNSINVVRG---PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 269 (390)
T ss_dssp EE-----ECCSSCSEEECCSSCCCEEEC---CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred cc-----CCCCcceEEECCCCeeeeccc---cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcc
Confidence 54 334689999999999986533 2347899999999999864 5789999999999999999998899999
Q ss_pred ccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEE
Q 044366 259 YLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFL 338 (918)
Q Consensus 259 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 338 (918)
.+++|++|++++|++.+. +..+..+++|+.|++++|++. .+|..+..+++|++|++++|.+..++ +..+++|+.|
T Consensus 270 ~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L 344 (390)
T 3o6n_A 270 KMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNL 344 (390)
T ss_dssp TCSSCCEEECCSSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEE
T ss_pred ccccCCEEECCCCcCccc-CcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---chhhccCCEE
Confidence 999999999999999864 556788999999999999998 56777889999999999999998875 6778999999
Q ss_pred eCCCCccccccCccc
Q 044366 339 DLSQNNFYCEISFNW 353 (918)
Q Consensus 339 ~Ls~N~l~~~~~~~~ 353 (918)
++++|++.|++...+
T Consensus 345 ~l~~N~~~~~~~~~~ 359 (390)
T 3o6n_A 345 TLSHNDWDCNSLRAL 359 (390)
T ss_dssp ECCSSCEEHHHHHHH
T ss_pred EcCCCCccchhHHHH
Confidence 999999999865443
No 272
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.3e-37 Score=355.16 Aligned_cols=262 Identities=25% Similarity=0.334 Sum_probs=200.5
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccccc-----
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSN----- 717 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----- 717 (918)
..++|.+.+.||+|+||.||+|.. .+|+.||||+++... .....+.+.+|+++++.++||||+++++++..
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~---~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~ 88 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLA 88 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC---CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCC
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCceeeeeccccccc
Confidence 347899999999999999999965 579999999986531 22235679999999999999999999998765
Q ss_pred -CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCc---EEE
Q 044366 718 -AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYE---AHV 793 (918)
Q Consensus 718 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl 793 (918)
++..++||||+++|+|.+++........+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||
T Consensus 89 ~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL 165 (676)
T 3qa8_A 89 PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKI 165 (676)
T ss_dssp TTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEE
T ss_pred CCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEE
Confidence 677899999999999999998765555689999999999999999999999 9999999999999997765 999
Q ss_pred eccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhh-----
Q 044366 794 SDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIE----- 868 (918)
Q Consensus 794 ~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~----- 868 (918)
+|||.+....... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||........+.......
T Consensus 166 ~DFG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~ 244 (676)
T 3qa8_A 166 IDLGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHI 244 (676)
T ss_dssp CSCCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------C
T ss_pred ccccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhh
Confidence 9999998775433 2345678999999999999999999999999999999999999986543222211110000
Q ss_pred -hhhh------cccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 044366 869 -VNQI------LDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEV 912 (918)
Q Consensus 869 -~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ev 912 (918)
.... .....+.+..........+.+++.+||+.||++|||++|+
T Consensus 245 ~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 245 VVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0000 0111122222223345678999999999999999999774
No 273
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=6.5e-36 Score=333.39 Aligned_cols=202 Identities=23% Similarity=0.249 Sum_probs=170.7
Q ss_pred HhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc-CC-----ceeeEecccc
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR-HR-----NIIKFHGFCS 716 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~ 716 (918)
..++|.+.+.||+|+||.||+|.. .+++.||||+++.. .....++..|+.+++.++ |+ +|+++++++.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 457899999999999999999965 47889999998642 122456778888888885 44 4999999999
Q ss_pred cCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeC--CCCcEEEe
Q 044366 717 NAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLD--SEYEAHVS 794 (918)
Q Consensus 717 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~ 794 (918)
..+..++||||++ |+|.+++.... ...+++..++.++.|++.||+|||++ ..+|+||||||+||+++ .++.+||+
T Consensus 127 ~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 127 FRNHLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp ETTEEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred cCCceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 9999999999996 59999997653 24589999999999999999999952 12899999999999995 46789999
Q ss_pred ccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcch
Q 044366 795 DFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVS 856 (918)
Q Consensus 795 DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~ 856 (918)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 204 DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 204 DFGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CCTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999877543 234578999999999999999999999999999999999999987543
No 274
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=331.77 Aligned_cols=257 Identities=20% Similarity=0.330 Sum_probs=190.5
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccc-------
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCS------- 716 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~------- 716 (918)
.++|...+.||+|+||.||+|... +|+.||||++... .....+.+.+|+++++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 85 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT----DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT 85 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC----ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence 467899999999999999999664 5899999998643 2233577899999999999999999998763
Q ss_pred -------cCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeC-CC
Q 044366 717 -------NAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLD-SE 788 (918)
Q Consensus 717 -------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~ 788 (918)
+....++||||++ |+|.+++.. .++++..++.++.|++.||+|||+. +|+||||||+||+++ ++
T Consensus 86 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 86 DDVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTED 157 (320)
T ss_dssp C----CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTT
T ss_pred cccccccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCC
Confidence 3467899999998 599999864 3489999999999999999999999 999999999999997 56
Q ss_pred CcEEEeccccccccCCCCC---Cceeccccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhh
Q 044366 789 YEAHVSDFGFAKFLEPHSS---NWTEFAGTVGYAAPELAYT-MRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISN 864 (918)
Q Consensus 789 ~~~kl~DfG~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~ 864 (918)
+.+||+|||+++...+... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... ....
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~ 236 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQL 236 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence 7999999999987654321 2234567899999998865 678999999999999999999999987544211 1110
Q ss_pred hHhh--------hhhh-------cccCCCCCCcch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 865 MIIE--------VNQI-------LDHRLPTPSRDV----TDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 865 ~~~~--------~~~~-------~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.... ..+. .......+.... ......+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 237 ILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0000 0000 000000000000 112356889999999999999999999975
No 275
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=4.2e-36 Score=339.95 Aligned_cols=250 Identities=24% Similarity=0.316 Sum_probs=187.2
Q ss_pred CCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCCceEEEE
Q 044366 647 NFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVC 725 (918)
Q Consensus 647 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 725 (918)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+++..++||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 45556789999999998776668999999998652 135678999999887 8999999999999999999999
Q ss_pred EeccCCChhHHhhcccccCC----CCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCC-------------
Q 044366 726 EYLARGSLTTILRDDAAAKE----FSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSE------------- 788 (918)
Q Consensus 726 e~~~~gsL~~~l~~~~~~~~----l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~------------- 788 (918)
||++ |+|.+++........ .++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCc
Confidence 9996 699999976532111 13345678999999999999999 99999999999999754
Q ss_pred CcEEEeccccccccCCCCCC----ceeccccccccccccccc-------CCCCcccchhhHHHHHHHHHh-CCCCCCcch
Q 044366 789 YEAHVSDFGFAKFLEPHSSN----WTEFAGTVGYAAPELAYT-------MRATEKYDVYSFGVLALEVIK-GYHPGDFVS 856 (918)
Q Consensus 789 ~~~kl~DfG~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~ 856 (918)
+.+||+|||++......... .....||+.|+|||++.+ ..++.++|||||||++|||++ |+.||+...
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 48999999999887654322 234579999999999875 568999999999999999999 999986443
Q ss_pred hhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 857 TIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.... ... ....... .............+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~---~i~---~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 245 SRES---NII---RGIFSLD-EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp THHH---HHH---HTCCCCC-CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhHH---HHh---cCCCCcc-cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 2111 100 1111100 0111122345567899999999999999999999985
No 276
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.3e-36 Score=330.43 Aligned_cols=247 Identities=23% Similarity=0.335 Sum_probs=200.9
Q ss_pred HHHhcCCCCceeeccccceEEEEEE-eCCCCEEEEEEcccccccCC--CCChHHHHHHHHHHhhcc--CCceeeEecccc
Q 044366 642 TKATGNFGEKYCIGKGGQRSVYKAE-LPSGNIFAVKKFKAELFSDE--TANPSEFLNEVLALTEIR--HRNIIKFHGFCS 716 (918)
Q Consensus 642 ~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~ 716 (918)
....++|...+.||+|+||.||+|. ..+|+.||||++........ ....+.+.+|+.+++.++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 3456789999999999999999995 45789999999976533221 112356778999999996 599999999999
Q ss_pred cCCceEEEEEeccC-CChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeC-CCCcEEEe
Q 044366 717 NAQHSFIVCEYLAR-GSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLD-SEYEAHVS 794 (918)
Q Consensus 717 ~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~ 794 (918)
.++..++||||+.+ ++|.+++... ..+++..++.++.|+++||+|||+. +|+||||||+||+++ +++.+||+
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEe
Confidence 99999999999986 8999999764 3489999999999999999999999 999999999999999 77899999
Q ss_pred ccccccccCCCCCCceecccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhc
Q 044366 795 DFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRA-TEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQIL 873 (918)
Q Consensus 795 DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 873 (918)
|||+++..... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||+.......
T Consensus 193 Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~------------- 257 (320)
T 3a99_A 193 DFGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR------------- 257 (320)
T ss_dssp CCTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH-------------
T ss_pred eCccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhc-------------
Confidence 99999876543 2334568999999999987666 6789999999999999999999875432110
Q ss_pred ccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 874 DHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 874 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
..... .... ...+.+++.+||+.||++|||++|+++
T Consensus 258 -~~~~~-~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 258 -GQVFF-RQRV---SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp -CCCCC-SSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -ccccc-cccC---CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000 1111 245788999999999999999999986
No 277
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=326.98 Aligned_cols=249 Identities=22% Similarity=0.312 Sum_probs=191.7
Q ss_pred HHHHHhcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCC--CCChHHHHHHHHHHhhc----cCCceeeEe
Q 044366 640 EITKATGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDE--TANPSEFLNEVLALTEI----RHRNIIKFH 712 (918)
Q Consensus 640 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l----~h~niv~~~ 712 (918)
+.+...++|...+.||+|+||.||+|.. .+|+.||||++........ ......+.+|+.+++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 4455668899999999999999999965 5789999999865432211 11234466799999888 899999999
Q ss_pred cccccCCceEEEEEe-ccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeC-CCCc
Q 044366 713 GFCSNAQHSFIVCEY-LARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLD-SEYE 790 (918)
Q Consensus 713 ~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~ 790 (918)
+++...+..++|||| +++++|.+++.... .+++.+++.++.|+++||+|||+. +|+||||||+||+++ .++.
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCe
Confidence 999999999999999 78999999997643 489999999999999999999999 999999999999999 7899
Q ss_pred EEEeccccccccCCCCCCceecccccccccccccccCCCC-cccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhh
Q 044366 791 AHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRAT-EKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEV 869 (918)
Q Consensus 791 ~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~ 869 (918)
+||+|||++...... ......|+..|+|||++.+..+. .++||||||+++|||++|+.||.......
T Consensus 179 ~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---------- 246 (312)
T 2iwi_A 179 AKLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL---------- 246 (312)
T ss_dssp EEECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH----------
T ss_pred EEEEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHh----------
Confidence 999999999877543 23445689999999998876664 58999999999999999999986532210
Q ss_pred hhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 870 NQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
......+ .. ....+.+++.+||+.||++|||++|+++
T Consensus 247 ----~~~~~~~-~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 247 ----EAELHFP-AH---VSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ----HTCCCCC-TT---SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----hhccCCc-cc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111111 11 2245788999999999999999999987
No 278
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.2e-36 Score=338.57 Aligned_cols=249 Identities=24% Similarity=0.284 Sum_probs=187.0
Q ss_pred HhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhc-cCCceeeEecccccCCceE
Q 044366 644 ATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 644 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 722 (918)
...+|...+.||+|+||.||.....+|+.||||++.... ...+.+|+++++.+ +||||+++++++.+.+..+
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~-------~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~ 94 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC-------FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQY 94 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT-------EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH-------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEE
Confidence 345688889999999999766655689999999986432 22357899999999 7999999999999999999
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC-----CCcEEEeccc
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS-----EYEAHVSDFG 797 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~DfG 797 (918)
+||||++ |+|.+++.... ...++.+++.++.||+.||+|||+. +|+||||||+||+++. ...+||+|||
T Consensus 95 lv~E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG 168 (432)
T 3p23_A 95 IAIELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFG 168 (432)
T ss_dssp EEEECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTT
T ss_pred EEEECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEeccc
Confidence 9999997 59999997653 2244556789999999999999999 9999999999999953 2368899999
Q ss_pred cccccCCCC---CCceecccccccccccccc---cCCCCcccchhhHHHHHHHHHh-CCCCCCcchhhhhhhhhhHhhhh
Q 044366 798 FAKFLEPHS---SNWTEFAGTVGYAAPELAY---TMRATEKYDVYSFGVLALEVIK-GYHPGDFVSTIFSSISNMIIEVN 870 (918)
Q Consensus 798 ~~~~~~~~~---~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 870 (918)
+++...... .......||+.|+|||++. +..++.++||||+||++|||++ |..||........ .
T Consensus 169 ~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~------~--- 239 (432)
T 3p23_A 169 LCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA------N--- 239 (432)
T ss_dssp EEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH------H---
T ss_pred ceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH------H---
Confidence 998775432 2234467999999999997 4567889999999999999999 8999753321110 0
Q ss_pred hhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 871 QILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
....................+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 240 ILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 01111101111111223345788999999999999999999984
No 279
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=5.6e-36 Score=333.62 Aligned_cols=258 Identities=19% Similarity=0.270 Sum_probs=196.5
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc-----------CCceeeEe
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR-----------HRNIIKFH 712 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~ 712 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++ ||||++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~ 92 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 92 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCC
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHH
Confidence 46899999999999999999964 57899999998642 122467889999998886 89999999
Q ss_pred cccccCC----ceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeC--
Q 044366 713 GFCSNAQ----HSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLD-- 786 (918)
Q Consensus 713 ~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-- 786 (918)
+++...+ ..++||||+ +++|.+++.... ...+++..++.++.||+.||+|||+++ +|+||||||+||+++
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 93 DHFNHKGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEEEEEETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEE
T ss_pred HHhhccCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEecc
Confidence 9986543 789999999 789999997643 244899999999999999999999953 899999999999994
Q ss_pred ----CCCcEEEeccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhh-
Q 044366 787 ----SEYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSS- 861 (918)
Q Consensus 787 ----~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~- 861 (918)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 245 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C
T ss_pred CCCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC
Confidence 4457999999999876543 23357899999999999999999999999999999999999998743311000
Q ss_pred hhhhHhhhhhhccc-----------------------CCCC------------CCcchHHHHHHHHHHHHHcccCCCCCC
Q 044366 862 ISNMIIEVNQILDH-----------------------RLPT------------PSRDVTDKLRSIMEVAILCLVENPEAR 906 (918)
Q Consensus 862 ~~~~~~~~~~~~~~-----------------------~~~~------------~~~~~~~~~~~l~~li~~cl~~dp~~R 906 (918)
.........+.... .... ...........+.+++.+||+.||++|
T Consensus 246 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 325 (373)
T 1q8y_A 246 DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKR 325 (373)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred hHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcccc
Confidence 00000000000000 0000 001123456788999999999999999
Q ss_pred CCHHHHHH
Q 044366 907 PTMKEVCN 914 (918)
Q Consensus 907 Pt~~evl~ 914 (918)
||++|+++
T Consensus 326 pt~~ell~ 333 (373)
T 1q8y_A 326 ADAGGLVN 333 (373)
T ss_dssp BCHHHHHT
T ss_pred CCHHHHhh
Confidence 99999986
No 280
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.2e-36 Score=330.19 Aligned_cols=256 Identities=24% Similarity=0.349 Sum_probs=178.4
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHH-HHhhccCCceeeEecccccCCceE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVL-ALTEIRHRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~ 722 (918)
.++|...+.||+|+||.||+|.. .+|+.||||+++... ......++..|+. +++.++||||+++++++.+++..+
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~ 97 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV---DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCW 97 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC---CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc---CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceE
Confidence 36788899999999999999966 479999999987532 1122345666666 677789999999999999999999
Q ss_pred EEEEeccCCChhHHhhcc--cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 723 IVCEYLARGSLTTILRDD--AAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
+||||+++ +|.+++... .....+++..++.++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++
T Consensus 98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISG 174 (327)
T ss_dssp EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence 99999985 888877632 12345899999999999999999999953 89999999999999999999999999998
Q ss_pred ccCCCCCCceeccccccccccccc----ccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccC
Q 044366 801 FLEPHSSNWTEFAGTVGYAAPELA----YTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHR 876 (918)
Q Consensus 801 ~~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (918)
....... .....|++.|+|||++ .+..++.++||||||+++|||++|+.||......... ........
T Consensus 175 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-------~~~~~~~~ 246 (327)
T 3aln_A 175 QLVDSIA-KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ-------LTQVVKGD 246 (327)
T ss_dssp C-------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSC
T ss_pred ecccccc-cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH-------HHHHhcCC
Confidence 7654322 2334689999999998 4567899999999999999999999998654321111 11111211
Q ss_pred CCCCC-cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 877 LPTPS-RDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 877 ~~~~~-~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.+... .........+.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 247 PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11111 011122356888999999999999999999975
No 281
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.8e-35 Score=327.15 Aligned_cols=256 Identities=18% Similarity=0.229 Sum_probs=197.7
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CC-CEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCc------eeeEecccc
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SG-NIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRN------IIKFHGFCS 716 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~ 716 (918)
.++|.+.+.||+|+||.||+|... ++ +.||+|+++.. ....+.+.+|+.+++.++|++ ++.+++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence 478999999999999999999653 44 68999998642 122467889999999998766 899999999
Q ss_pred cCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeee-----------
Q 044366 717 NAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLL----------- 785 (918)
Q Consensus 717 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----------- 785 (918)
..+..++||||+ ++++.+++.... ...+++.+++.++.||+.||+|||+. +|+||||||+||++
T Consensus 93 ~~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 93 FHGHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECC
T ss_pred eCCeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccc
Confidence 999999999999 567777776543 24589999999999999999999999 99999999999999
Q ss_pred --------CCCCcEEEeccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchh
Q 044366 786 --------DSEYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVST 857 (918)
Q Consensus 786 --------~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~ 857 (918)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHEHH---TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTSCC---CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccccccccCCCcEEEeecCccccccccc---cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 567899999999998754332 345789999999999999999999999999999999999999875432
Q ss_pred hhhhhhhhHhhh--------hhhcc--------cCCCC-----------------CCcchHHHHHHHHHHHHHcccCCCC
Q 044366 858 IFSSISNMIIEV--------NQILD--------HRLPT-----------------PSRDVTDKLRSIMEVAILCLVENPE 904 (918)
Q Consensus 858 ~~~~~~~~~~~~--------~~~~~--------~~~~~-----------------~~~~~~~~~~~l~~li~~cl~~dp~ 904 (918)
... ........ ..... ..++. ...........+.+++.+||+.||+
T Consensus 245 ~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 245 REH-LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp HHH-HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred HHH-HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 110 00000000 00000 00000 0001112345788999999999999
Q ss_pred CCCCHHHHHH
Q 044366 905 ARPTMKEVCN 914 (918)
Q Consensus 905 ~RPt~~evl~ 914 (918)
+|||++|+++
T Consensus 324 ~Rpt~~e~l~ 333 (355)
T 2eu9_A 324 QRITLAEALL 333 (355)
T ss_dssp TSCCHHHHTT
T ss_pred hCcCHHHHhc
Confidence 9999999974
No 282
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=9.1e-36 Score=324.10 Aligned_cols=253 Identities=20% Similarity=0.290 Sum_probs=178.4
Q ss_pred hcCCCCceeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|...+.||+|+||.||+|.. .+|+.||||++...... ....+.+.++..+++.++||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK--EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH--HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc--hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 46788899999999999999966 47999999998753211 1112334445556788899999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHH-DCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
||||+ ++.+..+.... ...+++..++.++.|+++||+|||+ . +++||||||+||+++.++.+||+|||++...
T Consensus 102 v~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp EECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EEecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 99999 44555554432 2458999999999999999999998 6 8999999999999999999999999999876
Q ss_pred CCCCCCceecccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 803 EPHSSNWTEFAGTVGYAAPELAY-----TMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 803 ~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
.... ......|++.|+|||++. +..++.++||||||+++|||++|+.||............. .....
T Consensus 176 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-------~~~~~ 247 (318)
T 2dyl_A 176 VDDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV-------LQEEP 247 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH-------HHSCC
T ss_pred cCCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHH-------hccCC
Confidence 5432 223456899999999984 4568889999999999999999999987533222211111 11111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
+... ........+.+++.+||+.||.+|||++|+++
T Consensus 248 ~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 PLLP-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCC-ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1111 00112246788999999999999999999875
No 283
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.8e-34 Score=317.80 Aligned_cols=307 Identities=26% Similarity=0.400 Sum_probs=235.0
Q ss_pred CCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCC
Q 044366 17 IGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLA 96 (918)
Q Consensus 17 ~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~ 96 (918)
+..+++|++|++++|+++ .+| .+..+++|++|++++|+++ .+|. +..+++|++|++++|.++. + +++..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~-~~~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQIT-DISP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccc-cchh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCC
Confidence 456888999999999887 444 4888999999999999888 4555 8888888888888888874 3 4688888888
Q ss_pred EEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccc
Q 044366 97 LLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENR 176 (918)
Q Consensus 97 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 176 (918)
+|++++|.+.+..+ +..+++|++|++++|...... ..+..+++|++|++++|.+.+..+ +..+++|++|++++|.
T Consensus 114 ~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCcccCchh--hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 88888888875433 788888888888888655333 347888888888888888876543 7788888888888888
Q ss_pred cCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCcc
Q 044366 177 LSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKE 256 (918)
Q Consensus 177 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 256 (918)
++++.+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.++...+ +..+++|++|++++|.+++. ..
T Consensus 189 l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~ 260 (347)
T 4fmz_A 189 IEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NA 260 (347)
T ss_dssp CCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GG
T ss_pred cccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hh
Confidence 886644 7778888888888888875433 7788888888888888876543 77788888888888888754 45
Q ss_pred ccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCcc
Q 044366 257 IGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLT 336 (918)
Q Consensus 257 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 336 (918)
+..+++|++|++++|++.+. ..+..+++|+.|++++|++.+..+..+.++++|++|++++|.+..+.+ +..+++|+
T Consensus 261 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 336 (347)
T 4fmz_A 261 VKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMD 336 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCS
T ss_pred HhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccc
Confidence 77778888888888887764 346777777788887777777777777777777777777777777665 66677777
Q ss_pred EEeCCCCccc
Q 044366 337 FLDLSQNNFY 346 (918)
Q Consensus 337 ~L~Ls~N~l~ 346 (918)
.|++++|+|+
T Consensus 337 ~L~l~~N~i~ 346 (347)
T 4fmz_A 337 SADFANQVIK 346 (347)
T ss_dssp EESSSCC---
T ss_pred eeehhhhccc
Confidence 7777777664
No 284
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2e-34 Score=317.54 Aligned_cols=307 Identities=24% Similarity=0.378 Sum_probs=183.8
Q ss_pred cccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCC
Q 044366 161 IGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLR 240 (918)
Q Consensus 161 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 240 (918)
+..+++|++|++++|.+..+ + .+..+++|++|++++|.+++..+ +..+++|++|++++|.++.. +.+.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCS
T ss_pred chhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCC
Confidence 44556666666666666543 2 25555666666666666554322 55555555555555555532 2355555555
Q ss_pred eEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeeccc
Q 044366 241 NLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNN 320 (918)
Q Consensus 241 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 320 (918)
+|++++|.+.+..+ +..+++|+.|++++|.... .++ .+..+++|++|++++|.
T Consensus 114 ~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~------------------------~~~-~~~~l~~L~~L~l~~~~ 166 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLS------------------------DLS-PLSNMTGLNYLTVTESK 166 (347)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCC------------------------CCG-GGTTCTTCCEEECCSSC
T ss_pred EEECcCCcccCchh--hccCCceeEEECCCCCCcc------------------------ccc-chhhCCCCcEEEecCCC
Confidence 55555555553322 4445555555555543332 222 24444555555555555
Q ss_pred ccCccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccc
Q 044366 321 LYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQ 400 (918)
Q Consensus 321 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~ 400 (918)
+..+.. +..+++|+.|++++|.+.... . +..+++|+.|++++|.+.+..+
T Consensus 167 ~~~~~~--~~~l~~L~~L~l~~n~l~~~~-------------------------~-~~~l~~L~~L~l~~n~l~~~~~-- 216 (347)
T 4fmz_A 167 VKDVTP--IANLTDLYSLSLNYNQIEDIS-------------------------P-LASLTSLHYFTAYVNQITDITP-- 216 (347)
T ss_dssp CCCCGG--GGGCTTCSEEECTTSCCCCCG-------------------------G-GGGCTTCCEEECCSSCCCCCGG--
T ss_pred cCCchh--hccCCCCCEEEccCCcccccc-------------------------c-ccCCCccceeecccCCCCCCch--
Confidence 444433 445555666666665553211 1 3444555566666665554333
Q ss_pred hhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccc
Q 044366 401 LVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLS 480 (918)
Q Consensus 401 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 480 (918)
+..+++|++|++++|++++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|++++. ..|..+++|+
T Consensus 217 ~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~ 290 (347)
T 4fmz_A 217 VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLN 290 (347)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCS
T ss_pred hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCC
Confidence 5556666666666666655443 66777777777777777753 3577777888888888887654 4577778888
Q ss_pred eEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCC
Q 044366 481 ELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQ 538 (918)
Q Consensus 481 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 538 (918)
.|++++|++++..|..+..+++|+.|+|++|++++..| +..+++|+.||+++|+++
T Consensus 291 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 291 SLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 88888888877777778888888888888888877665 777788888888888765
No 285
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-34 Score=342.63 Aligned_cols=315 Identities=21% Similarity=0.247 Sum_probs=277.8
Q ss_pred CCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEE
Q 044366 19 NLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALL 98 (918)
Q Consensus 19 ~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L 98 (918)
.+.+++.|++++|.+....+..+..+++|++|+|++|.+++..|..|+.+++|++|++++|.+++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46789999999999986666668899999999999999997778899999999999999999998888889999999999
Q ss_pred EccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccC
Q 044366 99 YLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLS 178 (918)
Q Consensus 99 ~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 178 (918)
+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++.. ++.+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99999999777777899999999999999999888889999999999999999998753 667889999999999988
Q ss_pred CcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCcccc
Q 044366 179 GLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIG 258 (918)
Q Consensus 179 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 258 (918)
++ ...++|+.|++++|.++...+.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|.
T Consensus 206 ~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 206 TL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp EE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred cc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 54 34568999999999998654432 3689999999999986 36789999999999999999999899999
Q ss_pred ccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEE
Q 044366 259 YLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFL 338 (918)
Q Consensus 259 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 338 (918)
.+++|+.|++++|.+.++ |..+..+++|+.|++++|.+. .+|..+..+++|+.|++++|.+..++ +..+++|+.|
T Consensus 276 ~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L 350 (597)
T 3oja_B 276 KMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNL 350 (597)
T ss_dssp TCSSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEE
T ss_pred CccCCCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEE
Confidence 999999999999999864 666778999999999999998 57778899999999999999998775 6677899999
Q ss_pred eCCCCccccccCc
Q 044366 339 DLSQNNFYCEISF 351 (918)
Q Consensus 339 ~Ls~N~l~~~~~~ 351 (918)
++++|+|.|.+..
T Consensus 351 ~l~~N~~~~~~~~ 363 (597)
T 3oja_B 351 TLSHNDWDCNSLR 363 (597)
T ss_dssp ECCSSCEEHHHHH
T ss_pred EeeCCCCCChhHH
Confidence 9999999987643
No 286
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2e-35 Score=314.66 Aligned_cols=231 Identities=13% Similarity=0.086 Sum_probs=180.8
Q ss_pred hcCCCCceeeccccceEEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCceEE
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 723 (918)
.++|.+.+.||+|+||.||+|... +|+.||||++...... .....+.|.+|+..++.++||||+++++++.+++..++
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 108 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVL-PDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV 108 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECccccc-CHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence 367999999999999999999654 5899999999764221 12224789999999999999999999999999999999
Q ss_pred EEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 724 VCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 724 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+++++|.++++.. ....++.+|+.|++.||+|||+. +|+||||||+||+++.++.+||+++|
T Consensus 109 v~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc------
Confidence 99999999999999642 35567899999999999999999 99999999999999999999998543
Q ss_pred CCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcc
Q 044366 804 PHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRD 883 (918)
Q Consensus 804 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (918)
|++ .++.++|||||||++|||++|+.||....... .+.. .........+.....
T Consensus 175 --------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~-~~~~----~~~~~~~~~~~~~~~ 228 (286)
T 3uqc_A 175 --------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRS-GLAP----AERDTAGQPIEPADI 228 (286)
T ss_dssp --------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCC-CSEE----CCBCTTSCBCCHHHH
T ss_pred --------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcch-hhHH----HHHHhccCCCChhhc
Confidence 333 36789999999999999999999987543211 0000 000001111110000
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 044366 884 VTDKLRSIMEVAILCLVENPEARPTMKEVCNLLC 917 (918)
Q Consensus 884 ~~~~~~~l~~li~~cl~~dp~~RPt~~evl~~L~ 917 (918)
.......+.+++.+||+.||++| |++|+++.|+
T Consensus 229 ~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~ 261 (286)
T 3uqc_A 229 DRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQ 261 (286)
T ss_dssp CTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHH
Confidence 11223568899999999999999 9999999986
No 287
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=4.9e-33 Score=303.99 Aligned_cols=286 Identities=24% Similarity=0.288 Sum_probs=172.2
Q ss_pred CCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEcc
Q 044366 22 KLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLN 101 (918)
Q Consensus 22 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~ 101 (918)
+++++++++++++ .+|..+. ++|++|+|++|++++..|..|..+++|++|++++|.+++..|..|+++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 5777777777776 5666553 567777777777765555567777777777777777766666667777777777777
Q ss_pred CCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeecccccccc--CCCcccccccccCeeeccccccCC
Q 044366 102 DNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSG--PIPSVIGNLKSLLQLDLSENRLSG 179 (918)
Q Consensus 102 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~ 179 (918)
+|+++ .+|..+. ++|++|++++|+++...+..+.++++|++|++++|.++. ..+..|..+ +|++|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 77666 3333333 567777777777665555556666677777777766642 455566666 66666666666665
Q ss_pred cCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccc
Q 044366 180 LIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGY 259 (918)
Q Consensus 180 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 259 (918)
++. .+. ++|++|++++|.+++..+..|..+++|+.|++++|++++..+..|..+++|++|++++|+++ ..|..+..
T Consensus 187 l~~-~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 IPK-DLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp CCS-SSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred cCc-ccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 422 222 46666666666666555566666666666666666666655555666666666666666666 34444566
Q ss_pred cCCCCeEecCCCccCCcCCCcCCCC------CCCcEEEccCCcCc--CCCCccccCCCCCCeEEeec
Q 044366 260 LKSLSKLEFCANHLSGVIPHSVGNL------TGLVLLNMCENHLF--GPIPKSLRNLTSLERVRFNQ 318 (918)
Q Consensus 260 l~~L~~L~l~~n~l~~~~~~~~~~l------~~L~~L~l~~n~l~--~~~~~~l~~l~~L~~L~l~~ 318 (918)
+++|+.|++++|++.++.+..|... ..|+.|++++|++. +..|..|..+++|+.+++++
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~ 329 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGN 329 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC--
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccc
Confidence 6666666666666665555555432 33444444444443 33334444444444444433
No 288
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.2e-34 Score=309.83 Aligned_cols=231 Identities=23% Similarity=0.305 Sum_probs=178.7
Q ss_pred hcCCCCc-eeeccccceEEEEEEe-CCCCEEEEEEcccccccCCCCChHHHHHHHHHH-hhccCCceeeEeccccc----
Q 044366 645 TGNFGEK-YCIGKGGQRSVYKAEL-PSGNIFAVKKFKAELFSDETANPSEFLNEVLAL-TEIRHRNIIKFHGFCSN---- 717 (918)
Q Consensus 645 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~---- 717 (918)
.++|.+. +.||+|+||.||+|.. .+++.||+|+++. ...+.+|++++ +..+||||+++++++..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 86 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAG 86 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc---------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence 3567666 7799999999999955 5799999999853 24678899887 55699999999999876
Q ss_pred CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCC---CCcEEEe
Q 044366 718 AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDS---EYEAHVS 794 (918)
Q Consensus 718 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~ 794 (918)
+...++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred CceEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEe
Confidence 677899999999999999998753 34589999999999999999999999 9999999999999998 7889999
Q ss_pred ccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcc
Q 044366 795 DFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILD 874 (918)
Q Consensus 795 DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 874 (918)
|||++..... ..++.++||||+||++|||++|+.||......... .. .......
T Consensus 163 Dfg~a~~~~~----------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-~~---~~~~~~~ 216 (299)
T 3m2w_A 163 DFGFAKETTG----------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PG---MKTRIRM 216 (299)
T ss_dssp CCTTCEECTT----------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC--------CC---SCCSSCT
T ss_pred cccccccccc----------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-HH---HHHHHhh
Confidence 9999875431 34677999999999999999999998644321100 00 0001111
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 875 HRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 875 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
.....+..........+.+++.+||+.||++|||++|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 217 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1111111111123457889999999999999999999986
No 289
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.3e-34 Score=317.24 Aligned_cols=246 Identities=17% Similarity=0.146 Sum_probs=187.6
Q ss_pred hcCCCCceeeccccceEEEEEEeCCCCEEEEEEccccccc----CCCCChHHHHHHHHHHhhcc----------------
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFS----DETANPSEFLNEVLALTEIR---------------- 704 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~---------------- 704 (918)
.++|...+.||+|+||.||+|+. +|+.||||+++..... ......+.+.+|+.+++.++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788899999999999999987 7899999999764321 12333578999999999986
Q ss_pred ----------CCceeeEeccccc-------------CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHH
Q 044366 705 ----------HRNIIKFHGFCSN-------------AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANA 761 (918)
Q Consensus 705 ----------h~niv~~~~~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~ 761 (918)
||||+++++++.+ .+..++||||+++|++.+.+.+ ..+++.+++.++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 5555566665554 6789999999999977666643 347999999999999999
Q ss_pred HHHHH-hCCCCCeEEcCCCCCCeeeCCCC--------------------cEEEeccccccccCCCCCCceeccccccccc
Q 044366 762 LSYLH-HDCIPPIVHRDISSKNVLLDSEY--------------------EAHVSDFGFAKFLEPHSSNWTEFAGTVGYAA 820 (918)
Q Consensus 762 l~~LH-~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~a 820 (918)
|+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccC
Confidence 99999 88 999999999999999887 8999999999876532 3479999999
Q ss_pred ccccccCCCCcccchhhHHHH-HHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcc
Q 044366 821 PELAYTMRATEKYDVYSFGVL-ALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCL 899 (918)
Q Consensus 821 PE~~~~~~~~~~~Dv~slG~v-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 899 (918)
||++.+.. +.++||||+|++ .+++++|..||.... +............................++.+++.+||
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL----WLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH----HHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh----hhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHh
Confidence 99998766 889999998777 778888999963211 101111111111111111122223456678999999999
Q ss_pred cCCCCCCCCHHHHH
Q 044366 900 VENPEARPTMKEVC 913 (918)
Q Consensus 900 ~~dp~~RPt~~evl 913 (918)
+.| |++|++
T Consensus 321 ~~d-----sa~e~l 329 (336)
T 2vuw_A 321 NFS-----SATDLL 329 (336)
T ss_dssp GSS-----SHHHHH
T ss_pred ccC-----CHHHHH
Confidence 976 999998
No 290
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=7.4e-33 Score=302.59 Aligned_cols=294 Identities=20% Similarity=0.219 Sum_probs=206.6
Q ss_pred CCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEEC
Q 044366 45 NQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDL 124 (918)
Q Consensus 45 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 124 (918)
.+|+.++++++.++ .+|..+. ++|++|++++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 46889999999888 7787764 68888888888888777778888888888888888888777888888888888888
Q ss_pred cCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCC--cCCccCCCCCCCcEeeccCcccc
Q 044366 125 SQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSG--LIPLSLSNLSSLTVMSLFNNSLS 202 (918)
Q Consensus 125 s~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~ 202 (918)
++|+++ .+|..+. ++|++|++++|+++++.+..|.++++|++|++++|.++. ..+..+..+ +|++|++++|+++
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 888888 4555544 788888888888887777778888888888888888853 556677777 7888888888877
Q ss_pred cCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCC
Q 044366 203 GSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVG 282 (918)
Q Consensus 203 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 282 (918)
+ +|..+. ++|++|++++|.+++..+..|..+++|+.|++++|++++..+..+..+++|++|++++|++. .+|..+.
T Consensus 186 ~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 261 (332)
T 2ft3_A 186 G-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLP 261 (332)
T ss_dssp S-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGG
T ss_pred c-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhh
Confidence 5 343333 57777777777777766667777777777777777777766666777777777777777776 4455566
Q ss_pred CCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccc--cccCcccccccccc
Q 044366 283 NLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFY--CEISFNWRNFSKLG 360 (918)
Q Consensus 283 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~~~~L~ 360 (918)
.+++|+.|++++|++++..+..|..... -...+.|+.|++++|++. .+....|..++.|+
T Consensus 262 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~------------------~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~ 323 (332)
T 2ft3_A 262 DLKLLQVVYLHTNNITKVGVNDFCPVGF------------------GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRL 323 (332)
T ss_dssp GCTTCCEEECCSSCCCBCCTTSSSCSSC------------------CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCST
T ss_pred cCccCCEEECCCCCCCccChhHcccccc------------------ccccccccceEeecCcccccccCcccccccchhh
Confidence 6666666666666666555555543210 000234555555555554 33344455555555
Q ss_pred eeecccc
Q 044366 361 TFNASMN 367 (918)
Q Consensus 361 ~l~l~~n 367 (918)
.+++++|
T Consensus 324 ~l~l~~n 330 (332)
T 2ft3_A 324 AIQFGNY 330 (332)
T ss_dssp TEEC---
T ss_pred hhhcccc
Confidence 5555554
No 291
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.1e-34 Score=344.95 Aligned_cols=237 Identities=23% Similarity=0.339 Sum_probs=190.0
Q ss_pred hcCCCCceeeccccceEEEEEEeC--CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCceeeEecccccCCc--
Q 044366 645 TGNFGEKYCIGKGGQRSVYKAELP--SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQH-- 720 (918)
Q Consensus 645 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-- 720 (918)
.++|.+.+.||+|+||.||+|... +|+.||||++... ......+.|.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 155 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS---GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG 155 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS---CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc---CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence 378999999999999999999664 6899999998642 122234678999999999999999999999977655
Q ss_pred ---eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccc
Q 044366 721 ---SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFG 797 (918)
Q Consensus 721 ---~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 797 (918)
.|+||||+++++|.+++.. .+++.+++.|+.||+.||+|||+. +|+||||||+||+++.+ .+||+|||
T Consensus 156 ~~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 156 DPVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp CEEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCT
T ss_pred CceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecc
Confidence 6999999999999988754 489999999999999999999999 99999999999999986 89999999
Q ss_pred cccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCC
Q 044366 798 FAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRL 877 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (918)
+++..... ....||+.|+|||++.+. ++.++|||||||++|+|++|..|+..... ...
T Consensus 227 ~a~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~-----------------~~~ 284 (681)
T 2pzi_A 227 AVSRINSF----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV-----------------DGL 284 (681)
T ss_dssp TCEETTCC----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC-----------------SSC
T ss_pred cchhcccC----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc-----------------ccc
Confidence 99876543 345789999999998765 48899999999999999999888543110 001
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHh
Q 044366 878 PTPSRDVTDKLRSIMEVAILCLVENPEARPT-MKEVCNLL 916 (918)
Q Consensus 878 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt-~~evl~~L 916 (918)
+. ..........+.+++.+||+.||++||+ ++++.+.+
T Consensus 285 ~~-~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l 323 (681)
T 2pzi_A 285 PE-DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQL 323 (681)
T ss_dssp CT-TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred cc-cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHH
Confidence 11 1112223457889999999999999996 55555443
No 292
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.1e-32 Score=301.07 Aligned_cols=289 Identities=21% Similarity=0.285 Sum_probs=254.0
Q ss_pred CCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEcc
Q 044366 22 KLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLN 101 (918)
Q Consensus 22 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~ 101 (918)
++++++++++.++ .+|..+. ++|++|+|++|++++..+..|+.+++|++|++++|.+++..|..|..+++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 7999999999998 7787665 689999999999997666689999999999999999998889999999999999999
Q ss_pred CCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeecccccccc--CCCcccccccccCeeeccccccCC
Q 044366 102 DNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSG--PIPSVIGNLKSLLQLDLSENRLSG 179 (918)
Q Consensus 102 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~ 179 (918)
+|+++ ..|..+. ++|++|++++|++++..+..+.++++|++|++++|.++. ..+..|.++++|++|++++|.++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 99998 4555444 799999999999998777789999999999999999964 677889999999999999999997
Q ss_pred cCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccc
Q 044366 180 LIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGY 259 (918)
Q Consensus 180 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 259 (918)
++. .+. ++|++|++++|++++..+..|..+++|++|++++|.+++..+..+..+++|++|++++|+++ ..|..+..
T Consensus 186 l~~-~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 186 IPQ-GLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp CCS-SCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred CCc-ccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 643 333 78999999999999888899999999999999999999888888999999999999999999 56777899
Q ss_pred cCCCCeEecCCCccCCcCCCcCCCC------CCCcEEEccCCcCcC--CCCccccCCCCCCeEEeeccc
Q 044366 260 LKSLSKLEFCANHLSGVIPHSVGNL------TGLVLLNMCENHLFG--PIPKSLRNLTSLERVRFNQNN 320 (918)
Q Consensus 260 l~~L~~L~l~~n~l~~~~~~~~~~l------~~L~~L~l~~n~l~~--~~~~~l~~l~~L~~L~l~~n~ 320 (918)
+++|++|++++|+++++.+..|... ..++.|++++|++.. +.|..|..+.+++.+++++|+
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 9999999999999999888888654 788999999999864 677899999999999999885
No 293
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.8e-32 Score=297.88 Aligned_cols=291 Identities=20% Similarity=0.223 Sum_probs=258.9
Q ss_pred CCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEE
Q 044366 44 LNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLD 123 (918)
Q Consensus 44 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 123 (918)
..+|+.++++++.++ .+|..+. +.|++|++++|++++..+..|.++++|++|+|++|++++..|..|..+++|++|+
T Consensus 30 ~c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 30 QCHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EEETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred cCCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 447999999999998 7888765 6899999999999987777999999999999999999988899999999999999
Q ss_pred CcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCC--cCCccCCCCCCCcEeeccCccc
Q 044366 124 LSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSG--LIPLSLSNLSSLTVMSLFNNSL 201 (918)
Q Consensus 124 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l 201 (918)
|++|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++. ..+..|..+++|++|++++|.+
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 9999999 5565554 799999999999998888889999999999999999974 6678899999999999999999
Q ss_pred ccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcC
Q 044366 202 SGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSV 281 (918)
Q Consensus 202 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 281 (918)
+. +|..+. ++|++|++++|++++..+..|..+++|++|++++|.+++..+..+..+++|++|++++|++. .+|..+
T Consensus 184 ~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 259 (330)
T 1xku_A 184 TT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL 259 (330)
T ss_dssp CS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTT
T ss_pred cc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhh
Confidence 85 454443 79999999999999888889999999999999999999988889999999999999999999 567789
Q ss_pred CCCCCCcEEEccCCcCcCCCCccccCC------CCCCeEEeecccccC--ccccccCCCCCccEEeCCCCc
Q 044366 282 GNLTGLVLLNMCENHLFGPIPKSLRNL------TSLERVRFNQNNLYG--KVYEAFGDHPNLTFLDLSQNN 344 (918)
Q Consensus 282 ~~l~~L~~L~l~~n~l~~~~~~~l~~l------~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~Ls~N~ 344 (918)
..+++|+.|++++|++++..+..|... ..++.+++++|.+.. +.+..|..+++++.++|++|+
T Consensus 260 ~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 260 ADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 999999999999999998888888644 788999999999875 777899999999999999985
No 294
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.1e-34 Score=321.42 Aligned_cols=244 Identities=16% Similarity=0.150 Sum_probs=180.2
Q ss_pred cCCCCceeeccccceEEEEEE-eCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccC-CceeeEe-----------
Q 044366 646 GNFGEKYCIGKGGQRSVYKAE-LPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRH-RNIIKFH----------- 712 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~----------- 712 (918)
..|...+.||+|+||.||+|. ..+|+.||||+++..... .....+.|.+|+.+++.++| +|.....
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCc-cHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 457777899999999999996 567999999998743222 22346789999999999977 3221111
Q ss_pred ----------ccccc-----CCceEEEEEeccCCChhHHhhcc----cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 044366 713 ----------GFCSN-----AQHSFIVCEYLARGSLTTILRDD----AAAKEFSWNQRMNVIKGVANALSYLHHDCIPPI 773 (918)
Q Consensus 713 ----------~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 773 (918)
.++.. ....+++|+++ +++|.++++.. .....+++..++.++.|+++||+|||+. +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 11111 22456777765 57999988521 1234578899999999999999999999 99
Q ss_pred EEcCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeccccccccccccc----------ccCCCCcccchhhHHHHHH
Q 044366 774 VHRDISSKNVLLDSEYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELA----------YTMRATEKYDVYSFGVLAL 843 (918)
Q Consensus 774 vH~dlk~~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~~Dv~slG~vl~ 843 (918)
+||||||+||+++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 99999999999999999999999999865433 334567 999999998 5556888999999999999
Q ss_pred HHHhCCCCCCcchhhhhhhhhhHhhhhhhcccCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 044366 844 EVIKGYHPGDFVSTIFSSISNMIIEVNQILDHRLPTPSRDVTDKLRSIMEVAILCLVENPEARPTMKEVCN 914 (918)
Q Consensus 844 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~evl~ 914 (918)
||++|+.||....... . ....... .. .. ...+.+++.+||+.||++||++.|+++
T Consensus 309 elltg~~Pf~~~~~~~-~-------~~~~~~~-~~----~~---~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 309 WIWCADLPNTDDAALG-G-------SEWIFRS-CK----NI---PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHSSCCCCTTGGGS-C-------SGGGGSS-CC----CC---CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHCCCCCCCcchhh-h-------HHHHHhh-cc----cC---CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999999986543210 0 0111111 11 11 246888999999999999999888754
No 295
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.7e-33 Score=304.13 Aligned_cols=252 Identities=31% Similarity=0.501 Sum_probs=234.3
Q ss_pred CCCCEEeCCCCcccc--cCCccccCCCCCCEEEccc-ccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCE
Q 044366 21 SKLQYLDLGNNQLSG--VIPPEIGKLNQLRRLYLDV-NQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLAL 97 (918)
Q Consensus 21 ~~L~~L~L~~n~i~~--~~p~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~ 97 (918)
.++++|+|++|++++ .+|.+|+.+++|++|+|++ |.+.+.+|..|+.+++|++|++++|.+++.+|..|..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 579999999999998 8999999999999999995 9999899999999999999999999999999999999999999
Q ss_pred EEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCC-CCceeeccccccccCCCcccccccccCeeeccccc
Q 044366 98 LYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLS-NLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENR 176 (918)
Q Consensus 98 L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 176 (918)
|+|++|++.+..|..|..+++|++|+|++|++++.+|..+..++ +|++|++++|++++..|..|..++ |++|++++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999989999999999999999999999988999999998 999999999999988999999987 9999999999
Q ss_pred cCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCcc
Q 044366 177 LSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKE 256 (918)
Q Consensus 177 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 256 (918)
+++..|..|..+++|+.|+|++|.+++.++. +..+++|++|++++|++++.+|..|..+++|++|++++|++++..|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9988899999999999999999999866555 888999999999999999889999999999999999999999888876
Q ss_pred ccccCCCCeEecCCCc-cCC
Q 044366 257 IGYLKSLSKLEFCANH-LSG 275 (918)
Q Consensus 257 ~~~l~~L~~L~l~~n~-l~~ 275 (918)
..+++|+.+++++|+ +.+
T Consensus 288 -~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp -TTGGGSCGGGTCSSSEEES
T ss_pred -ccccccChHHhcCCCCccC
Confidence 889999999999998 554
No 296
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.3e-33 Score=303.15 Aligned_cols=252 Identities=33% Similarity=0.530 Sum_probs=232.0
Q ss_pred CCCCEEEcccccccc--cCCCCcCCCCCCCEEEccc-ccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCE
Q 044366 45 NQLRRLYLDVNQLHG--TIPPVIGQLSLINELVFCH-NNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLST 121 (918)
Q Consensus 45 ~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~l~~-n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 121 (918)
.+++.|+|++|++++ .+|..++.+++|++|++++ |++.+.+|..|.++++|++|+|++|++++..|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 689999999999998 8999999999999999995 9999999999999999999999999999889999999999999
Q ss_pred EECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCccccccc-ccCeeeccccccCCcCCccCCCCCCCcEeeccCcc
Q 044366 122 LDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLK-SLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNS 200 (918)
Q Consensus 122 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 200 (918)
|+|++|++++.+|..+.++++|++|++++|++++..|..+..++ +|++|++++|++++..|..+..++ |++|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999988999999999999999999999988899999998 999999999999988898998887 9999999999
Q ss_pred cccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCc
Q 044366 201 LSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHS 280 (918)
Q Consensus 201 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 280 (918)
+++..|..|..+++|+.|++++|++++.++. +..+++|++|++++|++++..|..+..+++|++|++++|++.+.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9988899999999999999999999876555 788899999999999999889999999999999999999999888876
Q ss_pred CCCCCCCcEEEccCCc-CcC
Q 044366 281 VGNLTGLVLLNMCENH-LFG 299 (918)
Q Consensus 281 ~~~l~~L~~L~l~~n~-l~~ 299 (918)
..+++|+.+++++|+ +.+
T Consensus 288 -~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp -TTGGGSCGGGTCSSSEEES
T ss_pred -ccccccChHHhcCCCCccC
Confidence 889999999999997 443
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.6e-35 Score=339.92 Aligned_cols=383 Identities=17% Similarity=0.109 Sum_probs=200.0
Q ss_pred CCCCEEECcCCcCCCcCCcC-CCCCCCCceeeccccccccC----CCcccccccccCeeeccccccCCcCCccC-CCCC-
Q 044366 117 KSLSTLDLSQNQLNGSIPCS-LDNLSNLDTLFLYKNSLSGP----IPSVIGNLKSLLQLDLSENRLSGLIPLSL-SNLS- 189 (918)
Q Consensus 117 ~~L~~L~Ls~n~i~~~~~~~-l~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~- 189 (918)
++|++|||++|+++...... +..+++|++|++++|+++.. ++..+..+++|++|+|++|.+.+..+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45777888888776543322 56677777777777777632 24456666777777777777764333222 2233
Q ss_pred ---CCcEeeccCccccc----CCCccccCCCCcceeecccccccCCCCCCC-----cCCCcCCeEEcccCcCcCCC----
Q 044366 190 ---SLTVMSLFNNSLSG----SIPPILGNLKSLSTLGLHINQLNGVIPPSI-----GNLSSLRNLSLFNNRLYGFV---- 253 (918)
Q Consensus 190 ---~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~Ls~n~l~~~~---- 253 (918)
+|++|+|++|.++. .++..+..+++|++|++++|.++...+..+ ...++|++|++++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 57777777777663 335566667777777777776654322222 12345677777776666433
Q ss_pred CccccccCCCCeEecCCCccCCcCCCcCC-----CCCCCcEEEccCCcCcCC----CCccccCCCCCCeEEeecccccCc
Q 044366 254 PKEIGYLKSLSKLEFCANHLSGVIPHSVG-----NLTGLVLLNMCENHLFGP----IPKSLRNLTSLERVRFNQNNLYGK 324 (918)
Q Consensus 254 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-----~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~~~ 324 (918)
+..+..+++|++|++++|.+....+..+. ..++|+.|++++|.++.. ++..+..+++|++|++++|.+...
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 33344456666666666665543333222 133555555555555432 233444444455555544444332
Q ss_pred c-----ccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceecccccc
Q 044366 325 V-----YEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPV 399 (918)
Q Consensus 325 ~-----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~ 399 (918)
. ...+..+++|+.|++++|.++..... .++..+..+++|++|+|++|.+....+.
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~--------------------~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCG--------------------DLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH--------------------HHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHH--------------------HHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 2 11112234444444444433211000 0222333344455555555554433222
Q ss_pred chhhccccCceecccccccCCCCCCCCCCCcccEEeccCcccccc----CccccccccccceecccCcccCCCCchhhcc
Q 044366 400 QLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSS----IPMSIGNLLKLHYLNLSNNQFSHKIPTEFEK 475 (918)
Q Consensus 400 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 475 (918)
.+... .....++|++|+|++|.+++. ++..+..+++|++|+|++|++++..+..+..
T Consensus 303 ~l~~~-------------------l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 363 (461)
T 1z7x_W 303 LLCET-------------------LLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 363 (461)
T ss_dssp HHHHH-------------------HTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHH
T ss_pred HHHHH-------------------hccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHH
Confidence 22221 001124566666666666543 3344455566666666666665444444432
Q ss_pred -----ccccceEeccCCcCCC----CCchhccccCCcceEecCCCcccccCccccc-----CCCCccEEEccCCcCC
Q 044366 476 -----LIHLSELDLSHNILQE----EIPPQICKMESLEKLNLSHNNLSDFIPRCFE-----EMRSLSWIDISYNELQ 538 (918)
Q Consensus 476 -----l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~l~l~~N~l~ 538 (918)
.++|++|+|++|+|++ .+|..+..+++|++|+|++|++++.....+. ...+|+.|++.+|.+.
T Consensus 364 ~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 364 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 440 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred HHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccC
Confidence 4566666666666654 4556666666666666666666643211111 1234566666665554
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=5.2e-35 Score=335.74 Aligned_cols=361 Identities=19% Similarity=0.149 Sum_probs=224.0
Q ss_pred CCCceeeccccccccCCCcc-cccccccCeeeccccccCCc----CCccCCCCCCCcEeeccCcccccCCCccc-cCCC-
Q 044366 141 SNLDTLFLYKNSLSGPIPSV-IGNLKSLLQLDLSENRLSGL----IPLSLSNLSSLTVMSLFNNSLSGSIPPIL-GNLK- 213 (918)
Q Consensus 141 ~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~- 213 (918)
++|++|+|++|+++...... +..+++|++|++++|.+++. ++..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 46777777777776443332 66677777777777777632 23455666777777777777654322222 2233
Q ss_pred ---CcceeecccccccC----CCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCC
Q 044366 214 ---SLSTLGLHINQLNG----VIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTG 286 (918)
Q Consensus 214 ---~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 286 (918)
+|++|+|++|.++. .++..+..+++|++|++++|.+++..+..+... .+...++
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~-------------------l~~~~~~ 143 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEG-------------------LLDPQCR 143 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHH-------------------HTSTTCC
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHH-------------------HhcCCCc
Confidence 46666666665552 224445555555555555555543222222110 0111233
Q ss_pred CcEEEccCCcCcCCC----CccccCCCCCCeEEeecccccCccccccC-----CCCCccEEeCCCCccccccCccccccc
Q 044366 287 LVLLNMCENHLFGPI----PKSLRNLTSLERVRFNQNNLYGKVYEAFG-----DHPNLTFLDLSQNNFYCEISFNWRNFS 357 (918)
Q Consensus 287 L~~L~l~~n~l~~~~----~~~l~~l~~L~~L~l~~n~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 357 (918)
|+.|++++|++++.. +..+..+++|++|++++|.+.......+. ..++|+.|++++|.++.....
T Consensus 144 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~------ 217 (461)
T 1z7x_W 144 LEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR------ 217 (461)
T ss_dssp CCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH------
T ss_pred ceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHH------
Confidence 444444444444322 33444455555555555555443333332 244566666666655421100
Q ss_pred ccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccc-----cchhhccccCceecccccccCC----CCCCCCCC
Q 044366 358 KLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIP-----VQLVKLFSLNKLILSLNQLFGG----VPLEFGTL 428 (918)
Q Consensus 358 ~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~-----~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l 428 (918)
.++..+..+++|++|++++|.+..... ..+..+++|++|++++|++++. ++..+..+
T Consensus 218 --------------~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 283 (461)
T 1z7x_W 218 --------------DLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAK 283 (461)
T ss_dssp --------------HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHC
T ss_pred --------------HHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhC
Confidence 123344556667777777776654322 1222456777777777777653 34556668
Q ss_pred CcccEEeccCccccccCccccccc-----cccceecccCcccCCC----CchhhccccccceEeccCCcCCCCCchhccc
Q 044366 429 TELQYLDLSANKLSSSIPMSIGNL-----LKLHYLNLSNNQFSHK----IPTEFEKLIHLSELDLSHNILQEEIPPQICK 499 (918)
Q Consensus 429 ~~L~~L~Ls~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 499 (918)
++|++|+|++|.++...+..+... ++|+.|+|++|.+++. ++..+..+++|++|+|++|+|++..+..+..
T Consensus 284 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 363 (461)
T 1z7x_W 284 ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 363 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHH
Confidence 899999999999886544444433 6999999999999865 4667778899999999999998766665553
Q ss_pred -----cCCcceEecCCCcccc----cCcccccCCCCccEEEccCCcCCCC
Q 044366 500 -----MESLEKLNLSHNNLSD----FIPRCFEEMRSLSWIDISYNELQGP 540 (918)
Q Consensus 500 -----l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~l~l~~N~l~~~ 540 (918)
.++|+.|+|++|++++ .+|..+..+++|+.||+++|++++.
T Consensus 364 ~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 364 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred HHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 6799999999999996 6888899999999999999999853
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=9.5e-31 Score=288.50 Aligned_cols=274 Identities=20% Similarity=0.185 Sum_probs=177.1
Q ss_pred EEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeecccccc
Q 044366 74 LVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSL 153 (918)
Q Consensus 74 L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l 153 (918)
.+++++.++ .+|..+. ++|++|++++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|++++|++
T Consensus 36 c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (353)
T 2z80_A 36 CKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112 (353)
T ss_dssp EECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcC
Confidence 344444444 3444333 3555555555555554444555566666666666666555555566666666666666666
Q ss_pred ccCCCcccccccccCeeeccccccCCcCC-ccCCCCCCCcEeeccCc-ccccCCCccccCCCCcceeecccccccCCCCC
Q 044366 154 SGPIPSVIGNLKSLLQLDLSENRLSGLIP-LSLSNLSSLTVMSLFNN-SLSGSIPPILGNLKSLSTLGLHINQLNGVIPP 231 (918)
Q Consensus 154 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 231 (918)
+++.+..|+++++|++|++++|+++++.+ ..|..+++|++|++++| .+....+..|.++++|++|++++|++++..|.
T Consensus 113 ~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 192 (353)
T 2z80_A 113 SNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPK 192 (353)
T ss_dssp SSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred CcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHH
Confidence 65444446666666666666666665444 45666666666666666 35555555666666666666666666666666
Q ss_pred CCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCC---CCCCCcEEEccCCcCcC----CCCcc
Q 044366 232 SIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVG---NLTGLVLLNMCENHLFG----PIPKS 304 (918)
Q Consensus 232 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~---~l~~L~~L~l~~n~l~~----~~~~~ 304 (918)
.+..+++|++|++++|++.......+..+++|+.|++++|.+.+..+..+. ....++.+++.++.+.+ .+|..
T Consensus 193 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~ 272 (353)
T 2z80_A 193 SLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKL 272 (353)
T ss_dssp TTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHH
T ss_pred HHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHH
Confidence 666666666666666666544434444566677777777766655444332 34567777777777654 35778
Q ss_pred ccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccC
Q 044366 305 LRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEIS 350 (918)
Q Consensus 305 l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 350 (918)
+.++++|++|++++|.++.++...|..+++|++|++++|++.|++.
T Consensus 273 l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 273 LNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred HhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 8899999999999999999998889999999999999999998875
No 300
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=1.7e-29 Score=287.21 Aligned_cols=254 Identities=25% Similarity=0.300 Sum_probs=175.0
Q ss_pred CCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccc
Q 044366 95 LALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSE 174 (918)
Q Consensus 95 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 174 (918)
...++.+++.++ .+|..+. ++++.|+|++|+|+...+..|.++++|++|+|++|+++++.+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 344555555554 3333332 4555666666666555555566666666666666666655555666666666666666
Q ss_pred cccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeeccc-ccccCCCCCCCcCCCcCCeEEcccCcCcCCC
Q 044366 175 NRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHI-NQLNGVIPPSIGNLSSLRNLSLFNNRLYGFV 253 (918)
Q Consensus 175 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 253 (918)
|+++.+.+..|..+++|++|+|++|.++.+.+..|.++++|++|++++ |.+..+.+..|.++++|++|++++|+++.+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 200 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI- 200 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-
Confidence 666655555566666666666666666655555666666666666666 344444444566777777777777777644
Q ss_pred CccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCC
Q 044366 254 PKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHP 333 (918)
Q Consensus 254 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 333 (918)
| .+..+++|+.|++++|++.+..+..|.++++|+.|++++|++.+..+..|.++++|++|+|++|+++.++...|..++
T Consensus 201 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 201 P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 2 366777777777777777777777788888888888888888877888888888888888888888888888999999
Q ss_pred CccEEeCCCCccccccCccc
Q 044366 334 NLTFLDLSQNNFYCEISFNW 353 (918)
Q Consensus 334 ~L~~L~Ls~N~l~~~~~~~~ 353 (918)
+|+.|+|++|+|.|+|...|
T Consensus 280 ~L~~L~L~~Np~~CdC~l~~ 299 (440)
T 3zyj_A 280 HLERIHLHHNPWNCNCDILW 299 (440)
T ss_dssp TCCEEECCSSCEECSSTTHH
T ss_pred CCCEEEcCCCCccCCCCchH
Confidence 99999999999999998654
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=3.6e-30 Score=277.97 Aligned_cols=244 Identities=25% Similarity=0.272 Sum_probs=125.6
Q ss_pred ccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccc--cCCCCcCCCCCCCEEEccccc
Q 044366 3 NLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHG--TIPPVIGQLSLINELVFCHNN 80 (918)
Q Consensus 3 ~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~l~~n~ 80 (918)
+.++++++ .+|..+. ++|++|+|++|+++...+..|..+++|++|+|++|+++. ..|..+..+++|++|++++|.
T Consensus 13 ~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~ 89 (306)
T 2z66_A 13 RCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNG 89 (306)
T ss_dssp ECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCS
T ss_pred EcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCc
Confidence 34445554 4554432 455666666666553322334556666666666655542 123444445555555555555
Q ss_pred ccccCCccccCCCCCCEEEccCCcccccCc-cccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeecccccccc-CCC
Q 044366 81 VSGRIPSSLGNLSNLALLYLNDNSLFGSIP-IVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSG-PIP 158 (918)
Q Consensus 81 ~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~ 158 (918)
++ .+|..+..+++|++|++++|++.+..+ ..+..+++|++|++++|++++..+..+.++++|++|++++|.+++ ..|
T Consensus 90 i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 168 (306)
T 2z66_A 90 VI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP 168 (306)
T ss_dssp EE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEEC
T ss_pred cc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccch
Confidence 55 344445555555555555555543333 345555555555555555554455555555555555555555543 344
Q ss_pred cccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCC-
Q 044366 159 SVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLS- 237 (918)
Q Consensus 159 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~- 237 (918)
..|..+++|++|++++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|++++|++++..+..+..++
T Consensus 169 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 248 (306)
T 2z66_A 169 DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPS 248 (306)
T ss_dssp SCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCT
T ss_pred hHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhc
Confidence 4555555555555555555554455555555555555555555544444455555555555555555544444444442
Q ss_pred cCCeEEcccCcCc
Q 044366 238 SLRNLSLFNNRLY 250 (918)
Q Consensus 238 ~L~~L~Ls~n~l~ 250 (918)
+|++|++++|.++
T Consensus 249 ~L~~L~L~~N~~~ 261 (306)
T 2z66_A 249 SLAFLNLTQNDFA 261 (306)
T ss_dssp TCCEEECTTCCEE
T ss_pred cCCEEEccCCCee
Confidence 4555555555544
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=4.3e-30 Score=283.20 Aligned_cols=284 Identities=18% Similarity=0.160 Sum_probs=225.6
Q ss_pred CccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCC
Q 044366 14 PPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLS 93 (918)
Q Consensus 14 p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~ 93 (918)
++....++.....++++++++ .+|..+. ++|++|++++|++++..+..+..+++|++|++++|.+++..|..|.+++
T Consensus 24 ~~~~~~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 100 (353)
T 2z80_A 24 NQASLSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLG 100 (353)
T ss_dssp ---CCEECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred CccCCCCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCC
Confidence 334455677778999999998 7787666 4899999999999965566899999999999999999988888899999
Q ss_pred CCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCC-cCCCCCCCCceeecccc-ccccCCCcccccccccCeee
Q 044366 94 NLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIP-CSLDNLSNLDTLFLYKN-SLSGPIPSVIGNLKSLLQLD 171 (918)
Q Consensus 94 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~-~~l~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~ 171 (918)
+|++|+|++|++++..+..|.++++|++|++++|+++...+ ..+.++++|++|++++| .++.+.+..|+++++|++|+
T Consensus 101 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~ 180 (353)
T 2z80_A 101 SLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELE 180 (353)
T ss_dssp TCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred CCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEE
Confidence 99999999999987766678999999999999999985444 47889999999999998 57777788899999999999
Q ss_pred ccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCc---CCCcCCeEEcccCc
Q 044366 172 LSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIG---NLSSLRNLSLFNNR 248 (918)
Q Consensus 172 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~Ls~n~ 248 (918)
+++|++++..|..|..+++|++|++++|.++...+..+..+++|++|++++|.+++..+..+. ..+.++.++++++.
T Consensus 181 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~ 260 (353)
T 2z80_A 181 IDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVK 260 (353)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCB
T ss_pred CCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhcccccccc
Confidence 999999988888999999999999999998755444556688999999999999876554443 35667788888877
Q ss_pred CcCC----CCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCC
Q 044366 249 LYGF----VPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGP 300 (918)
Q Consensus 249 l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 300 (918)
+.+. .|..+..+++|++|++++|++..+.+..|..+++|+.|++++|++...
T Consensus 261 l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 261 ITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp CCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 7642 345566777777777777777755555567777777777777776643
No 303
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1.8e-29 Score=288.09 Aligned_cols=234 Identities=24% Similarity=0.280 Sum_probs=145.8
Q ss_pred CCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeecc
Q 044366 118 SLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLF 197 (918)
Q Consensus 118 ~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 197 (918)
+|++|+|++|+|++..+..|.++++|++|+|++|+++++.+..|.++++|++|+|++|+++.+.+..|..+++|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 44444444444444444444444444444444444444444444555555555555555554444445555555555555
Q ss_pred CcccccCCCccccCCCCcceeeccc-ccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCc
Q 044366 198 NNSLSGSIPPILGNLKSLSTLGLHI-NQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGV 276 (918)
Q Consensus 198 ~N~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 276 (918)
+|+++.+.+..|.++++|+.|++++ |.+..+.+..|.++++|++|+|++|+++++ | .+..+++|+.|++++|++.+.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEE
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCccc
Confidence 5555544444555555555555555 333333334455666666666666666543 2 355666666677777776666
Q ss_pred CCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCccc
Q 044366 277 IPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNW 353 (918)
Q Consensus 277 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 353 (918)
.|..|.++++|+.|++++|++.+..+..|.++++|++|++++|.++.++...|..+++|+.|+|++|++.|+|...|
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~~ 310 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILW 310 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTHH
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCchH
Confidence 66677777777777777777777777777888888888888888888888888899999999999999999998654
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.6e-29 Score=272.85 Aligned_cols=279 Identities=22% Similarity=0.298 Sum_probs=158.3
Q ss_pred CEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCc--CCcCCCCCCCCceeecc
Q 044366 72 NELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGS--IPCSLDNLSNLDTLFLY 149 (918)
Q Consensus 72 ~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~--~~~~l~~l~~L~~L~L~ 149 (918)
+.++++++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++.. .+..+.++++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 35566666665 5555443 5666666666666644444556666666666666666532 13444455666666666
Q ss_pred ccccccCCCcccccccccCeeeccccccCCcCC-ccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccC-
Q 044366 150 KNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIP-LSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNG- 227 (918)
Q Consensus 150 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~- 227 (918)
+|.++. .+..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..+..|..+++|++|++++|.+++
T Consensus 87 ~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 666553 33445555666666666665555433 345555555555555555554444555555555555555555543
Q ss_pred CCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccC
Q 044366 228 VIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRN 307 (918)
Q Consensus 228 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~ 307 (918)
..|..+..+ ++|++|++++|++.+..|..|..+++|+.|++++|++++..+..+..
T Consensus 166 ~~~~~~~~l------------------------~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 166 FLPDIFTEL------------------------RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp EECSCCTTC------------------------TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred cchhHHhhC------------------------cCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 234444444 44555555555554444555555555555555555555555555666
Q ss_pred CCCCCeEEeecccccCccccccCCCC-CccEEeCCCCccccccCccc--ccccccceeeccccccccCCCcCcC
Q 044366 308 LTSLERVRFNQNNLYGKVYEAFGDHP-NLTFLDLSQNNFYCEISFNW--RNFSKLGTFNASMNNIYGSIPPEIG 378 (918)
Q Consensus 308 l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~--~~~~~L~~l~l~~n~i~~~~~~~~~ 378 (918)
+++|+.|++++|.+....+..+..++ +|+.|++++|++.|+|...+ ..+...+.+....+.+....|..+.
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~ 295 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQ 295 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGT
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhC
Confidence 66666666666666666666777774 89999999999998876431 2233444444444455444444443
No 305
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.7e-29 Score=268.06 Aligned_cols=252 Identities=24% Similarity=0.287 Sum_probs=148.4
Q ss_pred CEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeecccc
Q 044366 96 ALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSEN 175 (918)
Q Consensus 96 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 175 (918)
+.++++++.++ .+|..+ .++|++|++++|++++..+..|.++++|++|++++|.++++.+..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 45666666665 334322 346666666666666555555666666666666666666555555555666666666655
Q ss_pred c-cCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCC
Q 044366 176 R-LSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVP 254 (918)
Q Consensus 176 ~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 254 (918)
. ++.+.+..|..+++|++|++++|.+++..+..|.++++|+ +|++++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~------------------------~L~l~~n~l~~~~~ 146 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQ------------------------YLYLQDNALQALPD 146 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC------------------------EEECCSSCCCCCCT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCC------------------------EEECCCCcccccCH
Confidence 4 5554455555555555555555555544444444444444 44555554444444
Q ss_pred ccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCC
Q 044366 255 KEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPN 334 (918)
Q Consensus 255 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 334 (918)
..+..+++|++|++++|++.+..+..|..+++|+.|++++|++.+..|..|.++++|++|++++|.+..+++..|..+++
T Consensus 147 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred hHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 44445555555555555555444445555666666666666666666666777777777777777777777777888899
Q ss_pred ccEEeCCCCccccccCcccccccccceeeccccccccCCCc
Q 044366 335 LTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPP 375 (918)
Q Consensus 335 L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~ 375 (918)
|+.|++++|++.|++...+. ...++.+..+.+.+....|+
T Consensus 227 L~~L~l~~N~~~c~~~~~~~-~~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 227 LQYLRLNDNPWVCDCRARPL-WAWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp CCEEECCSSCEECSGGGHHH-HHHHHHCCSEECCCBEEESG
T ss_pred cCEEeccCCCccCCCCcHHH-HHHHHhcccccCccccCCch
Confidence 99999999999988875421 12233333444444444443
No 306
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.8e-28 Score=279.69 Aligned_cols=247 Identities=26% Similarity=0.271 Sum_probs=159.4
Q ss_pred CCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcC
Q 044366 47 LRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQ 126 (918)
Q Consensus 47 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 126 (918)
.+.++.++..++ .+|..+. +++++|++++|++++..|..|.++++|++|+|++|+|.+..+..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 345555555555 4555443 4566666666666655566666666666666666666666666666666666666666
Q ss_pred CcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccc-cccCCcCCccCCCCCCCcEeeccCcccccCC
Q 044366 127 NQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSE-NRLSGLIPLSLSNLSSLTVMSLFNNSLSGSI 205 (918)
Q Consensus 127 n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 205 (918)
|+++...+..|.++++|++|+|++|+++.+.+..|..+++|++|++++ |.+..+.+..|.++++|++|+|++|++++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM- 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-
Confidence 666655555566666666666666666655555666666666666666 445544455566666666666666666643
Q ss_pred CccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCC
Q 044366 206 PPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLT 285 (918)
Q Consensus 206 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 285 (918)
| .+..+++|++|+|++|++++..|..|.++++|+.|++++|+++++.+..|..+++|+.|++++|++.++.+..|..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 2 366666777777777777666666677777777777777777766666677777777777777777766666677777
Q ss_pred CCcEEEccCCcCc
Q 044366 286 GLVLLNMCENHLF 298 (918)
Q Consensus 286 ~L~~L~l~~n~l~ 298 (918)
+|+.|++++|++.
T Consensus 291 ~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 291 YLVELHLHHNPWN 303 (452)
T ss_dssp TCCEEECCSSCEE
T ss_pred CCCEEEccCCCcC
Confidence 7777777777654
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3e-29 Score=267.69 Aligned_cols=255 Identities=22% Similarity=0.242 Sum_probs=169.8
Q ss_pred CEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCC
Q 044366 24 QYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDN 103 (918)
Q Consensus 24 ~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n 103 (918)
+.++.++++++ .+|..+ .++|++|+|++|++++..+..|..+++|++|++++|.+++..|..|..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 56667777666 555443 356777777777776555556677777777777777776666667777777777777777
Q ss_pred c-ccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCC
Q 044366 104 S-LFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIP 182 (918)
Q Consensus 104 ~-i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 182 (918)
. +....|..|..+++|++|++++|++++..|..+.++++|++|++++|++++..+..|+.+++|++|++++|+++++.+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 5 665556667777777777777777776666667777777777777777776666667777777777777777776666
Q ss_pred ccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCC
Q 044366 183 LSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKS 262 (918)
Q Consensus 183 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 262 (918)
..|..+++|++|++++|.+++..|..|..+++|+.|++++|++++..+..+..+++|++|++++|.+....+. ......
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~~~~ 249 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAW 249 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHHHH
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHHHHH
Confidence 6677777777777777777766677777777777777777777765555567777777777777776643221 111223
Q ss_pred CCeEecCCCccCCcCCCcCC
Q 044366 263 LSKLEFCANHLSGVIPHSVG 282 (918)
Q Consensus 263 L~~L~l~~n~l~~~~~~~~~ 282 (918)
++.+..+.+.+....|..+.
T Consensus 250 l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 250 LQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp HHHCCSEECCCBEEESGGGT
T ss_pred HHhcccccCccccCCchHhC
Confidence 44444555666555555443
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.2e-28 Score=277.91 Aligned_cols=247 Identities=24% Similarity=0.262 Sum_probs=183.7
Q ss_pred CCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcC
Q 044366 47 LRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQ 126 (918)
Q Consensus 47 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 126 (918)
.+.++.+++.++ .+|..+. .++++|++++|++++..+..|.++++|++|+|++|+|....+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 456666666666 5666554 5667777777777766667777777777777777777766667777777777777777
Q ss_pred CcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccc-cccCCcCCccCCCCCCCcEeeccCcccccCC
Q 044366 127 NQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSE-NRLSGLIPLSLSNLSSLTVMSLFNNSLSGSI 205 (918)
Q Consensus 127 n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 205 (918)
|+++...+..|.++++|++|+|++|+++.+.+..|..+++|++|++++ |.+..+.+..|.++++|++|+|++|.++.+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 200 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI- 200 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-
Confidence 777766666677777777777777777776666777777777777777 455555556677777788888888777743
Q ss_pred CccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCC
Q 044366 206 PPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLT 285 (918)
Q Consensus 206 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 285 (918)
| .+..+++|++|+|++|++++..+..|.++++|+.|+|++|+++++.+..|..+++|+.|+|++|++..+.+..|..++
T Consensus 201 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 201 P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 3 467777888888888888777777788888888888888888877777788888888888888888877777778888
Q ss_pred CCcEEEccCCcCc
Q 044366 286 GLVLLNMCENHLF 298 (918)
Q Consensus 286 ~L~~L~l~~n~l~ 298 (918)
+|+.|++++|++.
T Consensus 280 ~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 280 HLERIHLHHNPWN 292 (440)
T ss_dssp TCCEEECCSSCEE
T ss_pred CCCEEEcCCCCcc
Confidence 8888888888764
No 309
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.5e-31 Score=317.35 Aligned_cols=432 Identities=14% Similarity=0.048 Sum_probs=232.3
Q ss_pred CCccccCCCCCCEEEccCCccc---ccCccccC------------CCCCCCEEECcCCcCCCcCCcCCCCC-C-CCceee
Q 044366 85 IPSSLGNLSNLALLYLNDNSLF---GSIPIVMG------------NLKSLSTLDLSQNQLNGSIPCSLDNL-S-NLDTLF 147 (918)
Q Consensus 85 ~p~~l~~l~~L~~L~L~~n~i~---~~~~~~~~------------~l~~L~~L~Ls~n~i~~~~~~~l~~l-~-~L~~L~ 147 (918)
.+..+..+++|++|+|+++... +..|..++ .+++|++|+|++|.+++..+..+... + +|++|+
T Consensus 65 ~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~ 144 (592)
T 3ogk_B 65 PDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLK 144 (592)
T ss_dssp HHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEE
T ss_pred hHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEE
Confidence 3444566777888888775321 12222222 56677777777776665444444442 2 377777
Q ss_pred ccccc-ccc-CCCcccccccccCeeeccccccCCcC----CccCCCCCCCcEeeccCcccccC----CCccccCCCCcce
Q 044366 148 LYKNS-LSG-PIPSVIGNLKSLLQLDLSENRLSGLI----PLSLSNLSSLTVMSLFNNSLSGS----IPPILGNLKSLST 217 (918)
Q Consensus 148 L~~n~-l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~ 217 (918)
|++|. ++. ..+..+..+++|++|+|++|.+++.. +..+..+++|++|++++|.+++. ++..+.++++|++
T Consensus 145 L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~ 224 (592)
T 3ogk_B 145 LDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVS 224 (592)
T ss_dssp EESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCE
T ss_pred CcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcE
Confidence 76665 110 01112235666677777666665442 12234456666666666666522 2233445566666
Q ss_pred eecccccccCCCCCCCcCCCcCCeEEcccCcCc---CCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccC
Q 044366 218 LGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLY---GFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCE 294 (918)
Q Consensus 218 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~---~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 294 (918)
|++++|.+.+ .+..+..+++|++|+++.+... ...+..+..+++|+.|+++++... ..|..+..+++|+.|++++
T Consensus 225 L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~ 302 (592)
T 3ogk_B 225 VKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLY 302 (592)
T ss_dssp EECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETT
T ss_pred EeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCC
Confidence 6666666554 3345555666666666543221 112233444555555555543222 3333444455555555555
Q ss_pred CcCcCCCC-ccccCCCCCCeEEeecccccCcc-ccccCCCCCccEEeCCC---CccccccCcccccccccceeecccccc
Q 044366 295 NHLFGPIP-KSLRNLTSLERVRFNQNNLYGKV-YEAFGDHPNLTFLDLSQ---NNFYCEISFNWRNFSKLGTFNASMNNI 369 (918)
Q Consensus 295 n~l~~~~~-~~l~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~Ls~---N~l~~~~~~~~~~~~~L~~l~l~~n~i 369 (918)
|.+++... ..+.++++|++|+++ +.+.... ...+..+++|+.|++++ ++..... .|.+
T Consensus 303 ~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~----------------~~~~ 365 (592)
T 3ogk_B 303 ALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDE----------------EGLV 365 (592)
T ss_dssp CCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSST----------------TCCC
T ss_pred CcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccc----------------cCcc
Confidence 55432222 223444555555554 2222111 11122334444444441 0000000 1233
Q ss_pred ccC-CCcCcCCCCCCcEEEccCceeccccccchhh-ccccCceecc----cccccCC-----CCCCCCCCCcccEEeccC
Q 044366 370 YGS-IPPEIGDSSKLQVLDLSSNHIFGKIPVQLVK-LFSLNKLILS----LNQLFGG-----VPLEFGTLTELQYLDLSA 438 (918)
Q Consensus 370 ~~~-~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~~~~~~~l~~L~~L~Ls~ 438 (918)
+.. ++..+..+++|++|+++.|.+++..+..+.. +++|+.|+++ .|++++. ++..+..+++|++|+|++
T Consensus 366 ~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~ 445 (592)
T 3ogk_B 366 SQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYL 445 (592)
T ss_dssp CHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEEC
T ss_pred CHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEec
Confidence 221 1111334677888888777777666666655 7778888885 5666543 122245678888888874
Q ss_pred c--cccccCccccc-cccccceecccCcccCCC-CchhhccccccceEeccCCcCCCCC-chhccccCCcceEecCCCcc
Q 044366 439 N--KLSSSIPMSIG-NLLKLHYLNLSNNQFSHK-IPTEFEKLIHLSELDLSHNILQEEI-PPQICKMESLEKLNLSHNNL 513 (918)
Q Consensus 439 N--~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l 513 (918)
| .+++.....+. .+++|++|+|++|++++. .+..+.++++|+.|+|++|.|++.. +..+..+++|+.|+|++|++
T Consensus 446 ~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~i 525 (592)
T 3ogk_B 446 RQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRA 525 (592)
T ss_dssp CGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBC
T ss_pred CCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcC
Confidence 3 35544444443 377888888888888753 3445577888888888888876543 33445678888888888888
Q ss_pred cccCcccc-cCCCCccEEEccCC
Q 044366 514 SDFIPRCF-EEMRSLSWIDISYN 535 (918)
Q Consensus 514 ~~~~~~~~-~~l~~L~~l~l~~N 535 (918)
++.....+ ..++.+....+..+
T Consensus 526 t~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 526 SMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp CTTCTTGGGGCCTTEEEEEECCC
T ss_pred CHHHHHHHHHhCCCcEEEEecCc
Confidence 76533333 35676666655554
No 310
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=5.5e-30 Score=293.56 Aligned_cols=235 Identities=22% Similarity=0.237 Sum_probs=153.0
Q ss_pred CCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeC
Q 044366 261 KSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDL 340 (918)
Q Consensus 261 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 340 (918)
++|+.|++++|.+.+..|..|..+++|+.|++++|.+++..| +..+++|+.|++++|.+..++.. ++|+.|++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~-----~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG-----PSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC-----TTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC-----CCcCEEEC
Confidence 356666666666665555556666666666666665554333 44555555555555544433321 44444444
Q ss_pred CCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchhhccccCceecccccccCC
Q 044366 341 SQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGG 420 (918)
Q Consensus 341 s~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 420 (918)
++|. +.+..+. .+++|+.|+|++|.|++..|..+..+++|+.|+|++|++++.
T Consensus 107 ~~N~------------------------l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (487)
T 3oja_A 107 ANNN------------------------ISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (487)
T ss_dssp CSSC------------------------CCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEE
T ss_pred cCCc------------------------CCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCc
Confidence 4444 4333322 245677777777777777777777777777777777777776
Q ss_pred CCCCCC-CCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccc
Q 044366 421 VPLEFG-TLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICK 499 (918)
Q Consensus 421 ~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 499 (918)
.|..+. .+++|++|+|++|.|++..+ +..+++|+.|+|++|+|++.+| .|..+++|+.|+|++|.|++ +|..+..
T Consensus 160 ~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~ 235 (487)
T 3oja_A 160 NFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRF 235 (487)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred ChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhcc
Confidence 666665 67778888888888775522 3347778888888888876544 47777888888888888874 5666777
Q ss_pred cCCcceEecCCCccc-ccCcccccCCCCccEEEcc
Q 044366 500 MESLEKLNLSHNNLS-DFIPRCFEEMRSLSWIDIS 533 (918)
Q Consensus 500 l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~l~l~ 533 (918)
+++|+.|+|++|+++ +.+|..+..++.|+.++++
T Consensus 236 l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 778888888888877 4566777777777777765
No 311
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.6e-28 Score=266.68 Aligned_cols=235 Identities=22% Similarity=0.287 Sum_probs=146.9
Q ss_pred CCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEE
Q 044366 20 LSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLY 99 (918)
Q Consensus 20 l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~ 99 (918)
.+.+++|+|++|+++ .+|..++.+++|++|+|++|+++ .+|..++.+++|++|++++|.++ .+|..|..+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 466777777777776 66777777777777777777777 67777777777777777777776 6666677777777777
Q ss_pred ccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCC
Q 044366 100 LNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSG 179 (918)
Q Consensus 100 L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 179 (918)
|++|++.+..|..+.. . ..+..+.++++|++|+|++|+++ .+|..|+.+++|++|+|++|++++
T Consensus 157 L~~n~~~~~~p~~~~~------~---------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 157 IRACPELTELPEPLAS------T---------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp EEEETTCCCCCSCSEE------E---------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC
T ss_pred CCCCCCccccChhHhh------c---------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc
Confidence 7776666666655433 0 01112233555555555555555 344555556666666666666654
Q ss_pred cCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccc
Q 044366 180 LIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGY 259 (918)
Q Consensus 180 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 259 (918)
+ |..+..+++|++|+|++|.+.+.+|..|..+++|++|+|++|.+.+.+|..+.++++|++|+|++|++.+..|..+..
T Consensus 221 l-~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 L-GPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp C-CGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred C-chhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 3 334555666666666666655555666666666666666666665566666666666666666666666666666666
Q ss_pred cCCCCeEecCCCccC
Q 044366 260 LKSLSKLEFCANHLS 274 (918)
Q Consensus 260 l~~L~~L~l~~n~l~ 274 (918)
+++|+.+++..+.+.
T Consensus 300 L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 300 LPANCIILVPPHLQA 314 (328)
T ss_dssp SCTTCEEECCGGGSC
T ss_pred ccCceEEeCCHHHHH
Confidence 666666666655544
No 312
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=5.6e-28 Score=262.47 Aligned_cols=235 Identities=21% Similarity=0.254 Sum_probs=200.4
Q ss_pred CCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEE
Q 044366 44 LNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLD 123 (918)
Q Consensus 44 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 123 (918)
..+++.|+|++|+++ .+|..++.+++|++|++++|.++ .+|..++.+++|++|+|++|++. .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 467888888888887 77777777888888888888777 77777777888888888888776 5677777777888888
Q ss_pred CcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCccccc
Q 044366 124 LSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSG 203 (918)
Q Consensus 124 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 203 (918)
|++|++.+.+|..+... ..++.|.++++|++|+|++|+++ .+|..+..+++|++|+|++|.+++
T Consensus 157 L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 157 IRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp EEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC
T ss_pred CCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc
Confidence 87777766666655431 12345778999999999999999 557789999999999999999995
Q ss_pred CCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCC
Q 044366 204 SIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGN 283 (918)
Q Consensus 204 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 283 (918)
+|..+..+++|++|++++|.+.+.+|..|.++++|++|++++|++.+..|..+..+++|++|++++|++.+.+|..+..
T Consensus 221 -l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 -LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp -CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred -CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 5667999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEccCCcCc
Q 044366 284 LTGLVLLNMCENHLF 298 (918)
Q Consensus 284 l~~L~~L~l~~n~l~ 298 (918)
+++|+.+++..+.+.
T Consensus 300 L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 300 LPANCIILVPPHLQA 314 (328)
T ss_dssp SCTTCEEECCGGGSC
T ss_pred ccCceEEeCCHHHHH
Confidence 999999999987664
No 313
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=3.6e-31 Score=313.97 Aligned_cols=425 Identities=14% Similarity=0.052 Sum_probs=300.7
Q ss_pred CCCCcCCCCCCCEEEccccccc---ccCCcccc------------CCCCCCEEEccCCcccccCccccCCC--CCCCEEE
Q 044366 61 IPPVIGQLSLINELVFCHNNVS---GRIPSSLG------------NLSNLALLYLNDNSLFGSIPIVMGNL--KSLSTLD 123 (918)
Q Consensus 61 ~p~~~~~l~~L~~L~l~~n~~~---~~~p~~l~------------~l~~L~~L~L~~n~i~~~~~~~~~~l--~~L~~L~ 123 (918)
.+..+..+++|++|++++|... +.+|..++ .+++|++|+|++|.+++..+..+... .+|++|+
T Consensus 65 ~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~ 144 (592)
T 3ogk_B 65 PDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLK 144 (592)
T ss_dssp HHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEE
T ss_pred hHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEE
Confidence 3445567889999999886432 23443333 78999999999999987766666663 4599999
Q ss_pred CcCCc-CCC-cCCcCCCCCCCCceeeccccccccCC----CcccccccccCeeeccccccCCcC----CccCCCCCCCcE
Q 044366 124 LSQNQ-LNG-SIPCSLDNLSNLDTLFLYKNSLSGPI----PSVIGNLKSLLQLDLSENRLSGLI----PLSLSNLSSLTV 193 (918)
Q Consensus 124 Ls~n~-i~~-~~~~~l~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~ 193 (918)
|++|. ++. .++....++++|++|+|++|.+++.. +..+..+++|++|++++|.++++. +..+..+++|+.
T Consensus 145 L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~ 224 (592)
T 3ogk_B 145 LDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVS 224 (592)
T ss_dssp EESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCE
T ss_pred CcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcE
Confidence 99987 221 12223347899999999999987653 334567899999999999998433 334567899999
Q ss_pred eeccCcccccCCCccccCCCCcceeeccccccc---CCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCC
Q 044366 194 MSLFNNSLSGSIPPILGNLKSLSTLGLHINQLN---GVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCA 270 (918)
Q Consensus 194 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~---~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~ 270 (918)
|++++|.+.+ .+..+..+++|++|+++.+... ...+..+..+++|+.|+++++... ..+..+..+++|++|++++
T Consensus 225 L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~ 302 (592)
T 3ogk_B 225 VKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLY 302 (592)
T ss_dssp EECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETT
T ss_pred EeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCC
Confidence 9999999986 6688999999999999864432 233456778899999999987544 5677788899999999999
Q ss_pred CccCCcCC-CcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeec-----------ccccCccccc-cCCCCCccE
Q 044366 271 NHLSGVIP-HSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQ-----------NNLYGKVYEA-FGDHPNLTF 337 (918)
Q Consensus 271 n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~-----------n~l~~~~~~~-~~~l~~L~~ 337 (918)
|.+..... ..+..+++|+.|+++++...+.++..+.++++|++|++++ |.++...... +..+++|+.
T Consensus 303 ~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 382 (592)
T 3ogk_B 303 ALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEY 382 (592)
T ss_dssp CCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSE
T ss_pred CcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeE
Confidence 99765443 3367899999999994433333445557889999999993 5555433322 344677888
Q ss_pred EeCCCCccccccCcccccccccceeeccccccccCCCcCcCC-CCCCcEEEcc----Cceeccc-----cccchhhcccc
Q 044366 338 LDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGD-SSKLQVLDLS----SNHIFGK-----IPVQLVKLFSL 407 (918)
Q Consensus 338 L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~-~~~L~~L~L~----~N~l~~~-----~~~~~~~l~~L 407 (918)
|+++.|.++.. .+..+.. +++|+.|+++ .|.+++. .+..+.++++|
T Consensus 383 L~l~~~~l~~~------------------------~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L 438 (592)
T 3ogk_B 383 MAVYVSDITNE------------------------SLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKL 438 (592)
T ss_dssp EEEEESCCCHH------------------------HHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTC
T ss_pred EEeecCCccHH------------------------HHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCC
Confidence 87766665422 2222222 4566666664 5556542 23335667778
Q ss_pred Cceeccccc--ccCCCCCCC-CCCCcccEEeccCccccc-cCccccccccccceecccCcccCCC-CchhhccccccceE
Q 044366 408 NKLILSLNQ--LFGGVPLEF-GTLTELQYLDLSANKLSS-SIPMSIGNLLKLHYLNLSNNQFSHK-IPTEFEKLIHLSEL 482 (918)
Q Consensus 408 ~~L~L~~N~--l~~~~~~~~-~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L 482 (918)
+.|++++|. +++.....+ ..+++|++|+|++|.+++ .++..+..+++|++|+|++|.|++. .+..+..+++|+.|
T Consensus 439 ~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 518 (592)
T 3ogk_B 439 RRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYL 518 (592)
T ss_dssp CEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEE
T ss_pred CEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCee
Confidence 888876433 433322222 236789999999999875 3444557789999999999998654 34445678999999
Q ss_pred eccCCcCCCCCchhc-cccCCcceEecCCC
Q 044366 483 DLSHNILQEEIPPQI-CKMESLEKLNLSHN 511 (918)
Q Consensus 483 ~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N 511 (918)
+|++|++++.....+ ..++.+....+..+
T Consensus 519 ~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 519 WVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp EEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred ECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 999999987644444 35677777766655
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.1e-29 Score=274.30 Aligned_cols=248 Identities=24% Similarity=0.231 Sum_probs=145.3
Q ss_pred cCCCCCCEEEcccccccccCCCCcCCCCCCCEEEccccccc-ccCCcccc-------CCCCCCEEEccCCcccccCcccc
Q 044366 42 GKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVS-GRIPSSLG-------NLSNLALLYLNDNSLFGSIPIVM 113 (918)
Q Consensus 42 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~-~~~p~~l~-------~l~~L~~L~L~~n~i~~~~~~~~ 113 (918)
+..++|++|++++|.+ .+|..+... |++|++++|.+. ..+|..+. ++++|++|+|++|++++..|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3444555555555555 444444433 555555555552 23444433 45666666666666655555544
Q ss_pred --CCCCCCCEEECcCCcCCCcCCcCCCCC-----CCCceeeccccccccCCCcccccccccCeeeccccccCCcC--Ccc
Q 044366 114 --GNLKSLSTLDLSQNQLNGSIPCSLDNL-----SNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLI--PLS 184 (918)
Q Consensus 114 --~~l~~L~~L~Ls~n~i~~~~~~~l~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~ 184 (918)
..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..+..|+.+++|++|++++|++.+.. +..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 5566666666666666644 5555554 56666666666666555566666666666666666654321 112
Q ss_pred --CCCCCCCcEeeccCccccc---CCCccccCCCCcceeecccccccCCCC-CCCcCCCcCCeEEcccCcCcCCCCcccc
Q 044366 185 --LSNLSSLTVMSLFNNSLSG---SIPPILGNLKSLSTLGLHINQLNGVIP-PSIGNLSSLRNLSLFNNRLYGFVPKEIG 258 (918)
Q Consensus 185 --~~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 258 (918)
+..+++|++|+|++|++++ .....+..+++|++|++++|++++..| ..+..+++|++|+|++|+++. .|..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~ 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQ-VPKGLP 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSS-CCSSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccCh-hhhhcc
Confidence 2566666666666666652 112334556677777777777766553 345556777777777777763 344443
Q ss_pred ccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcC
Q 044366 259 YLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFG 299 (918)
Q Consensus 259 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 299 (918)
++|++|++++|++.+. |. +..+++|+.|++++|++++
T Consensus 274 --~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp --SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred --CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 6677777777777765 44 7777777777777777754
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=7.1e-29 Score=268.09 Aligned_cols=249 Identities=22% Similarity=0.223 Sum_probs=210.0
Q ss_pred CCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccccccc-ccCCCCcC-------CCCCCCEEEcccccccccCCcc
Q 044366 17 IGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLH-GTIPPVIG-------QLSLINELVFCHNNVSGRIPSS 88 (918)
Q Consensus 17 ~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~-~~~p~~~~-------~l~~L~~L~l~~n~~~~~~p~~ 88 (918)
++..++|++|++++|++ .+|..+... |++|+|++|++. ..+|..+. .+++|++|++++|.+++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45667799999999999 678777766 899999999994 45777665 7899999999999999889988
Q ss_pred c--cCCCCCCEEEccCCcccccCccccCCC-----CCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccC--CCc
Q 044366 89 L--GNLSNLALLYLNDNSLFGSIPIVMGNL-----KSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGP--IPS 159 (918)
Q Consensus 89 l--~~l~~L~~L~L~~n~i~~~~~~~~~~l-----~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~--~~~ 159 (918)
+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..++++++|++|+|++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 7 8999999999999999876 7777777 8999999999999988889999999999999999997654 233
Q ss_pred cc--ccccccCeeeccccccCCcC---CccCCCCCCCcEeeccCcccccCCC-ccccCCCCcceeecccccccCCCCCCC
Q 044366 160 VI--GNLKSLLQLDLSENRLSGLI---PLSLSNLSSLTVMSLFNNSLSGSIP-PILGNLKSLSTLGLHINQLNGVIPPSI 233 (918)
Q Consensus 160 ~~--~~l~~L~~L~Ls~N~l~~~~---~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~ 233 (918)
.+ ..+++|++|+|++|+++++. ...+..+++|++|+|++|++++..| ..+..+++|++|+|++|+++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 33 88999999999999998432 2345678999999999999997664 56777899999999999998 456666
Q ss_pred cCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCC
Q 044366 234 GNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSG 275 (918)
Q Consensus 234 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 275 (918)
. ++|++|++++|++++. |. +..+++|++|++++|++++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5 8999999999999977 54 8899999999999999875
No 316
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.3e-29 Score=294.08 Aligned_cols=188 Identities=19% Similarity=0.143 Sum_probs=133.9
Q ss_pred eccccceEEEEE-EeCCCCEEEEEEcccccccCC------CCChHHHHHHHHHHhhc-cCCceeeEecccccCCceEEEE
Q 044366 654 IGKGGQRSVYKA-ELPSGNIFAVKKFKAELFSDE------TANPSEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVC 725 (918)
Q Consensus 654 lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~------~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 725 (918)
.+.|+.|.+..+ +.-.|+.||||++........ ....++|.+|+++++++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 566777777666 444699999999875422111 12235799999999999 7999999999999999999999
Q ss_pred EeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCCC
Q 044366 726 EYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEPH 805 (918)
Q Consensus 726 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~~ 805 (918)
||++|++|.+++.+.+ +++.. +|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 9999999999998653 35654 5889999999999999 9999999999999999999999999999987766
Q ss_pred CCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCC
Q 044366 806 SSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHP 851 (918)
Q Consensus 806 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p 851 (918)
.......+||+.|||||++.+ .+..++|+||+|++.+++.+|..+
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 555667789999999999876 467789999999998887665433
No 317
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=9.3e-27 Score=271.74 Aligned_cols=268 Identities=25% Similarity=0.305 Sum_probs=215.7
Q ss_pred CCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEc
Q 044366 21 SKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYL 100 (918)
Q Consensus 21 ~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L 100 (918)
.++++|++++|+++ .+|..+. ++|++|+|++|+++ .+|. .+++|++|++++|+++ .+|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 35889999999998 7787776 78999999999988 6776 5688999999999888 5665 6788999999
Q ss_pred cCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCc
Q 044366 101 NDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGL 180 (918)
Q Consensus 101 ~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 180 (918)
++|++++. |. .+++|++|++++|+++. +|.. +++|++|+|++|+++++ |. .+++|+.|++++|+++++
T Consensus 109 s~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~l 176 (622)
T 3g06_A 109 FSNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTSL 176 (622)
T ss_dssp CSCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSCC
T ss_pred cCCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCCC
Confidence 99998754 43 56889999999999985 5543 47899999999998864 33 347889999999999975
Q ss_pred CCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCcccccc
Q 044366 181 IPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYL 260 (918)
Q Consensus 181 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 260 (918)
. ..+++|+.|++++|.+++ +|.. +++|+.|++++|.++.+ |. .+++|+.|++++|++++++ ..+
T Consensus 177 ~----~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l-~~---~~~~L~~L~Ls~N~L~~lp----~~l 240 (622)
T 3g06_A 177 P----MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSL-PA---LPSGLKELIVSGNRLTSLP----VLP 240 (622)
T ss_dssp C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSC-CC---CCTTCCEEECCSSCCSCCC----CCC
T ss_pred c----ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccccc-CC---CCCCCCEEEccCCccCcCC----CCC
Confidence 3 456889999999999985 3432 47899999999999854 33 2478999999999998643 456
Q ss_pred CCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCC
Q 044366 261 KSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDH 332 (918)
Q Consensus 261 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l 332 (918)
++|+.|++++|+|..+.+ .+++|+.|++++|+++ .+|..+.++++|+.|++++|.+.+..+..+..+
T Consensus 241 ~~L~~L~Ls~N~L~~lp~----~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 241 SELKELMVSGNRLTSLPM----LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp TTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CcCcEEECCCCCCCcCCc----ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 889999999999985443 5688999999999998 668889999999999999999988877766544
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=3.6e-26 Score=266.77 Aligned_cols=267 Identities=26% Similarity=0.299 Sum_probs=207.4
Q ss_pred CCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEEC
Q 044366 45 NQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDL 124 (918)
Q Consensus 45 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 124 (918)
.+++.|++++|.++ .+|..+. ++|++|++++|+++ .+|. .+++|++|+|++|+|+. +|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 35889999999988 7888776 78999999999888 5665 56889999999999874 444 6788999999
Q ss_pred cCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccC
Q 044366 125 SQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGS 204 (918)
Q Consensus 125 s~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 204 (918)
++|++++ +|. .+++|++|++++|++++++ .. +++|++|+|++|+++++. . .+++|+.|++++|.+++
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~~lp-~~---l~~L~~L~Ls~N~l~~l~-~---~~~~L~~L~L~~N~l~~- 175 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLTSLP-VL---PPGLQELSVSDNQLASLP-A---LPSELCKLWAYNNQLTS- 175 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCSCCC-CC---CTTCCEEECCSSCCSCCC-C---CCTTCCEEECCSSCCSC-
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCCcCC-CC---CCCCCEEECcCCcCCCcC-C---ccCCCCEEECCCCCCCC-
Confidence 9999885 444 5678899999999988643 32 488999999999988753 2 34678899999999885
Q ss_pred CCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCC
Q 044366 205 IPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNL 284 (918)
Q Consensus 205 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 284 (918)
+| ..+++|+.|++++|+++++ |. .+++|+.|++++|.++.+.. .+++|+.|++++|++.++ | ..+
T Consensus 176 l~---~~~~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~l~~----~~~~L~~L~Ls~N~L~~l-p---~~l 240 (622)
T 3g06_A 176 LP---MLPSGLQELSVSDNQLASL-PT---LPSELYKLWAYNNRLTSLPA----LPSGLKELIVSGNRLTSL-P---VLP 240 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSCC-C---CCC
T ss_pred Cc---ccCCCCcEEECCCCCCCCC-CC---ccchhhEEECcCCcccccCC----CCCCCCEEEccCCccCcC-C---CCC
Confidence 44 4568889999999998864 33 24788999999999885432 347899999999998864 3 456
Q ss_pred CCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCccccc
Q 044366 285 TGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRN 355 (918)
Q Consensus 285 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 355 (918)
++|+.|++++|+++. +|. .+++|+.|++++|.|..++ ..|..+++|+.|+|++|++.......+..
T Consensus 241 ~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~~lp-~~l~~l~~L~~L~L~~N~l~~~~~~~l~~ 306 (622)
T 3g06_A 241 SELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLTRLP-ESLIHLSSETTVNLEGNPLSERTLQALRE 306 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCCSCC-GGGGGSCTTCEEECCSCCCCHHHHHHHHH
T ss_pred CcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCCcCC-HHHhhccccCEEEecCCCCCCcCHHHHHh
Confidence 788999999998885 443 5678899999999998774 45888899999999999987655544443
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=5.2e-29 Score=269.81 Aligned_cols=256 Identities=18% Similarity=0.162 Sum_probs=120.9
Q ss_pred CEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCC
Q 044366 24 QYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDN 103 (918)
Q Consensus 24 ~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n 103 (918)
+.++++++.+...++..+..+++|++|+|++|++++..|..|..+++|++|++++|.+++..| +..+++|++|++++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 334444444443333333334444444444444443333444444444444444444443322 444555555555555
Q ss_pred cccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCc
Q 044366 104 SLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPL 183 (918)
Q Consensus 104 ~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 183 (918)
++++.. ..++|++|++++|++++..+.. +++|++|++++|++++..+..|+.+++|++|++++|++++..+.
T Consensus 91 ~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (317)
T 3o53_A 91 YVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (317)
T ss_dssp EEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG
T ss_pred cccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH
Confidence 544221 1245555555555554333222 34455555555555544444555555555555555555544444
Q ss_pred cC-CCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCC
Q 044366 184 SL-SNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKS 262 (918)
Q Consensus 184 ~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 262 (918)
.+ ..+++|++|+|++|.+++.. ....+++|++|+|++|++++.+ ..+..+++|+.|++++|++++ .|..+..+++
T Consensus 163 ~~~~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~ 238 (317)
T 3o53_A 163 ELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLVL-IEKALRFSQN 238 (317)
T ss_dssp GGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCCE-ECTTCCCCTT
T ss_pred HHhhccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCcch-hhhcccCcccEEECcCCcccc-hhhHhhcCCC
Confidence 33 24455555555555554331 1223455555555555555332 235555555555555555553 2334455555
Q ss_pred CCeEecCCCccC-CcCCCcCCCCCCCcEEEcc
Q 044366 263 LSKLEFCANHLS-GVIPHSVGNLTGLVLLNMC 293 (918)
Q Consensus 263 L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~ 293 (918)
|+.|++++|++. +..+..+..+++|+.+++.
T Consensus 239 L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 239 LEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp CCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 555555555555 4444445555555555555
No 320
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4.6e-29 Score=270.19 Aligned_cols=267 Identities=20% Similarity=0.208 Sum_probs=189.4
Q ss_pred CCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeec
Q 044366 239 LRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQ 318 (918)
Q Consensus 239 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~ 318 (918)
++.++++++.+.......+..+++|++|++++|.+.+..|..|..+++|+.|++++|++.+..+ +..+++|++|++++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4445556666554444445555666777777766666655666666666666666666654333 55555555555555
Q ss_pred ccccCccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccc
Q 044366 319 NNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIP 398 (918)
Q Consensus 319 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~ 398 (918)
|.+.+++. .++|++|++++|.+ .+..+. .+++|++|++++|++++..+
T Consensus 90 n~l~~l~~-----~~~L~~L~l~~n~l------------------------~~~~~~---~~~~L~~L~l~~N~l~~~~~ 137 (317)
T 3o53_A 90 NYVQELLV-----GPSIETLHAANNNI------------------------SRVSCS---RGQGKKNIYLANNKITMLRD 137 (317)
T ss_dssp SEEEEEEE-----CTTCCEEECCSSCC------------------------SEEEEC---CCSSCEEEECCSSCCCSGGG
T ss_pred CccccccC-----CCCcCEEECCCCcc------------------------CCcCcc---ccCCCCEEECCCCCCCCccc
Confidence 55544332 24555555555544 433322 24678888888888888778
Q ss_pred cchhhccccCceecccccccCCCCCCC-CCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhcccc
Q 044366 399 VQLVKLFSLNKLILSLNQLFGGVPLEF-GTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLI 477 (918)
Q Consensus 399 ~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 477 (918)
..+..+++|+.|+|++|++++..+..+ ..+++|++|+|++|.|++. + ....+++|++|+|++|+|++..+ .|..++
T Consensus 138 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~ 214 (317)
T 3o53_A 138 LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQSAA 214 (317)
T ss_dssp BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECG-GGGGGT
T ss_pred hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcchh-hhcccC
Confidence 888888888888888888887766666 4688999999999999865 2 23348899999999999986544 588999
Q ss_pred ccceEeccCCcCCCCCchhccccCCcceEecCCCccc-ccCcccccCCCCccEEEccC-CcCCCCCCC
Q 044366 478 HLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLS-DFIPRCFEEMRSLSWIDISY-NELQGPIPN 543 (918)
Q Consensus 478 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~l~l~~-N~l~~~~p~ 543 (918)
+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +..|..+..+++|+.+++++ +.++|..|.
T Consensus 215 ~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 215 GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 9999999999998 46778888999999999999998 66888889999999999984 456655443
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=2.2e-26 Score=244.10 Aligned_cols=211 Identities=26% Similarity=0.254 Sum_probs=171.8
Q ss_pred CccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchhhccccCceecc
Q 044366 334 NLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILS 413 (918)
Q Consensus 334 ~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 413 (918)
+|++|++++|.++.+....|.+++.|+.|++++|++.+..+..|..+++|++|+|++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34444444444444444444444455555555555555566678888899999999999988888888999999999999
Q ss_pred cccccCCCCCCCCCCCcccEEeccCcccccc-CccccccccccceecccCcccCCCCchhhccccccc----eEeccCCc
Q 044366 414 LNQLFGGVPLEFGTLTELQYLDLSANKLSSS-IPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLS----ELDLSHNI 488 (918)
Q Consensus 414 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~Ls~N~ 488 (918)
+|++.+..+..+..+++|++|+|++|.+++. +|..|..+++|++|+|++|++++..+..|..+++|+ .|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 9999888887899999999999999999874 588999999999999999999988888998888888 89999999
Q ss_pred CCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCCCCc
Q 044366 489 LQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPNST 545 (918)
Q Consensus 489 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~ 545 (918)
|++..+..+.. .+|+.|+|++|+++++.+..|..+++|+.|++++|+++|.+|.-.
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~ 244 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 244 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTH
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchH
Confidence 98766655554 589999999999999888889999999999999999999988643
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=3.3e-27 Score=270.54 Aligned_cols=192 Identities=23% Similarity=0.238 Sum_probs=97.8
Q ss_pred CCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeecc
Q 044366 94 NLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLS 173 (918)
Q Consensus 94 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 173 (918)
+|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|.++++.+ .++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 56666666666665555566666666666666666654433 5556666666666666553321 2555666666
Q ss_pred ccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCc-CCCcCCeEEcccCcCcCC
Q 044366 174 ENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIG-NLSSLRNLSLFNNRLYGF 252 (918)
Q Consensus 174 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~~ 252 (918)
+|.++++.+.. +++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.+++.
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 66555543322 34555555555555554455555555555555555555544444443 445555555555555443
Q ss_pred CCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCc
Q 044366 253 VPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLF 298 (918)
Q Consensus 253 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 298 (918)
.+ ...+++|+.|++++|.+.++++. +..+++|+.|++++|.++
T Consensus 185 ~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 185 KG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp EC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC
T ss_pred cc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCc
Confidence 11 12244444444444444432222 333444444444444433
No 323
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=2e-25 Score=235.61 Aligned_cols=206 Identities=23% Similarity=0.231 Sum_probs=172.2
Q ss_pred ccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchhhccccCceeccc
Q 044366 335 LTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILSL 414 (918)
Q Consensus 335 L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 414 (918)
.+.+++++|.++.++... .+.++.|++++|++.+..+..|..+++|++|+|++|+|+...+..|.++++|++|+|++
T Consensus 18 ~~~l~~~~~~l~~ip~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLTAIPSNI---PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCSSCCSCC---CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCCccCCCC---CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 344444444444333211 13455555555556556666788889999999999999877777788899999999999
Q ss_pred ccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCc
Q 044366 415 NQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIP 494 (918)
Q Consensus 415 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 494 (918)
|++++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 99988888888999999999999999998888889999999999999999998888889999999999999999998888
Q ss_pred hhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCCC
Q 044366 495 PQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPN 543 (918)
Q Consensus 495 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 543 (918)
..|..+++|+.|+|++|+++++.+..|..+++|+.|++++|+|+|.++.
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 8899999999999999999998888899999999999999999998764
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=9e-26 Score=239.45 Aligned_cols=230 Identities=22% Similarity=0.261 Sum_probs=154.6
Q ss_pred EEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccc
Q 044366 97 LLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENR 176 (918)
Q Consensus 97 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 176 (918)
..+..+..+. .+|..+. ++|++|++++|++++..+..|.++++|++|++++|+++++.+..|.++++|++|++++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 4555666654 4454443 468888888888876666677777788888888887777766677777777777777777
Q ss_pred cCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCC-CCCCCcCCCcCCeEEcccCcCcCCCCc
Q 044366 177 LSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGV-IPPSIGNLSSLRNLSLFNNRLYGFVPK 255 (918)
Q Consensus 177 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 255 (918)
++++.+..|.++++|++|++++|.+++..+..+..+++|++|++++|.+++. .|..|.++++|++|++++|+++++.+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 7777666777777777777777777766555666777777777777776653 355666666666666666666665555
Q ss_pred cccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCc
Q 044366 256 EIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNL 335 (918)
Q Consensus 256 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 335 (918)
.+..+++|+.+.+ .|++++|++.+..+..+.. .+|++|++++|.+..++...|..+++|
T Consensus 168 ~~~~l~~L~~l~l--------------------~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L 226 (276)
T 2z62_A 168 DLRVLHQMPLLNL--------------------SLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSL 226 (276)
T ss_dssp GGHHHHTCTTCCE--------------------EEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSC
T ss_pred Hhhhhhhccccce--------------------eeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccc
Confidence 5555555551100 3444444444333333332 256666666667767777777888889
Q ss_pred cEEeCCCCccccccC
Q 044366 336 TFLDLSQNNFYCEIS 350 (918)
Q Consensus 336 ~~L~Ls~N~l~~~~~ 350 (918)
+.|++++|++.|+|.
T Consensus 227 ~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 227 QKIWLHTNPWDCSCP 241 (276)
T ss_dssp CEEECCSSCBCCCTT
T ss_pred cEEEccCCcccccCC
Confidence 999999999988875
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=4.3e-29 Score=296.24 Aligned_cols=445 Identities=15% Similarity=0.118 Sum_probs=264.2
Q ss_pred EEEcccccccccCCccccCCCCCCEEEccCCcccc---cCcc------------ccCCCCCCCEEECcCCcCCCcCCcCC
Q 044366 73 ELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFG---SIPI------------VMGNLKSLSTLDLSQNQLNGSIPCSL 137 (918)
Q Consensus 73 ~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~---~~~~------------~~~~l~~L~~L~Ls~n~i~~~~~~~l 137 (918)
.+++..+... ..+..+..+++|++|++++|.... ..|. .+..+++|++|+|++|.+++..+..+
T Consensus 47 ~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l 125 (594)
T 2p1m_B 47 KVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELI 125 (594)
T ss_dssp EEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHH
T ss_pred EEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHH
Confidence 4555544332 222345677889999999875321 1111 12357788888888888876655555
Q ss_pred C-CCCCCceeecccc-ccccC-CCcccccccccCeeeccccccCCcCCccCC----CCCCCcEeeccCcc--ccc-CCCc
Q 044366 138 D-NLSNLDTLFLYKN-SLSGP-IPSVIGNLKSLLQLDLSENRLSGLIPLSLS----NLSSLTVMSLFNNS--LSG-SIPP 207 (918)
Q Consensus 138 ~-~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~----~l~~L~~L~L~~N~--l~~-~~~~ 207 (918)
. .+++|++|+|++| .++.. .+..+.++++|++|+|++|.+++..+..+. .+++|+.|++++|. ++. ..+.
T Consensus 126 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~ 205 (594)
T 2p1m_B 126 AKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALER 205 (594)
T ss_dssp HHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHH
T ss_pred HHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHH
Confidence 4 5788888888888 44432 333445788888888888887765444333 56688888888876 211 0111
Q ss_pred cccCCCCcceeecccc-cccCCCCCCCcCCCcCCeEEcccCc-------CcCCCCccccccCCCCeE-ecCCCccCCcCC
Q 044366 208 ILGNLKSLSTLGLHIN-QLNGVIPPSIGNLSSLRNLSLFNNR-------LYGFVPKEIGYLKSLSKL-EFCANHLSGVIP 278 (918)
Q Consensus 208 ~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~Ls~n~-------l~~~~~~~~~~l~~L~~L-~l~~n~l~~~~~ 278 (918)
.+..+++|+.|++++| .+++ ++..+..+++|++|+++.+. +.+ .+..+.++++|+.| .+.+... ...+
T Consensus 206 l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~ 282 (594)
T 2p1m_B 206 LVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLP 282 (594)
T ss_dssp HHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGG
T ss_pred HHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccch-hhHH
Confidence 2344578888888877 3443 45556677778888755443 222 12245666777776 3333222 1223
Q ss_pred CcCCCCCCCcEEEccCCcCcCCCC-ccccCCCCCCeEEeecccccCccccc-cCCCCCccEEeCCCCccccccCcccccc
Q 044366 279 HSVGNLTGLVLLNMCENHLFGPIP-KSLRNLTSLERVRFNQNNLYGKVYEA-FGDHPNLTFLDLSQNNFYCEISFNWRNF 356 (918)
Q Consensus 279 ~~~~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 356 (918)
..+..+++|+.|++++|.+..... ..+.++++|++|++++| +....... ...+++|+.|+++++.-..
T Consensus 283 ~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g--------- 352 (594)
T 2p1m_B 283 AVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFV--------- 352 (594)
T ss_dssp GGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTC---------
T ss_pred HHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccc---------
Confidence 333355667777777766543221 22446666666666666 32221111 1235666666663321000
Q ss_pred cccceeeccccccccCCCcCc-CCCCCCcEEEccCceeccccccchh-hccccCceecc--c----ccccCCCC-----C
Q 044366 357 SKLGTFNASMNNIYGSIPPEI-GDSSKLQVLDLSSNHIFGKIPVQLV-KLFSLNKLILS--L----NQLFGGVP-----L 423 (918)
Q Consensus 357 ~~L~~l~l~~n~i~~~~~~~~-~~~~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~~~-----~ 423 (918)
..+.+.++......+ ..+++|+.|+++.|.++......+. .+++|+.|+++ + |.+++... .
T Consensus 353 ------~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~ 426 (594)
T 2p1m_B 353 ------MEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGA 426 (594)
T ss_dssp ------SSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHH
T ss_pred ------cccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHH
Confidence 001122221111112 2357788888877777765555554 47788888888 3 44442211 1
Q ss_pred CCCCCCcccEEeccCccccccCcccccc-ccccceecccCcccCCCCchhh-ccccccceEeccCCcCCCCCch-hcccc
Q 044366 424 EFGTLTELQYLDLSANKLSSSIPMSIGN-LLKLHYLNLSNNQFSHKIPTEF-EKLIHLSELDLSHNILQEEIPP-QICKM 500 (918)
Q Consensus 424 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l 500 (918)
.+..+++|++|+|++ .++......+.. +++|+.|+|++|.+++..+..+ ..+++|++|+|++|.+++..+. ....+
T Consensus 427 l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l 505 (594)
T 2p1m_B 427 IVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKL 505 (594)
T ss_dssp HHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGG
T ss_pred HHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhC
Confidence 145677888999877 666544445554 7888999999988876555555 6688899999999988654443 34457
Q ss_pred CCcceEecCCCcccccCcccc-cCCCCccEEEccCCcCC
Q 044366 501 ESLEKLNLSHNNLSDFIPRCF-EEMRSLSWIDISYNELQ 538 (918)
Q Consensus 501 ~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~l~l~~N~l~ 538 (918)
++|+.|+|++|+++......+ ..+++|+...+..+.-.
T Consensus 506 ~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~ 544 (594)
T 2p1m_B 506 ETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAP 544 (594)
T ss_dssp GGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCG
T ss_pred CCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCcc
Confidence 889999999998855433344 45777777666665433
No 326
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=2.8e-29 Score=297.92 Aligned_cols=86 Identities=15% Similarity=0.070 Sum_probs=54.9
Q ss_pred CCcccEEeccCccccccCcccc-ccccccceecccCcccCCCCch-hhccccccceEeccCCcCCCCCchhc-cccCCcc
Q 044366 428 LTELQYLDLSANKLSSSIPMSI-GNLLKLHYLNLSNNQFSHKIPT-EFEKLIHLSELDLSHNILQEEIPPQI-CKMESLE 504 (918)
Q Consensus 428 l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~ 504 (918)
+++|++|+|++|.+++.....+ ..+++|+.|+|++|.+++.... ....+++|+.|++++|+++......+ ..++.|+
T Consensus 455 ~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~ 534 (594)
T 2p1m_B 455 AKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLN 534 (594)
T ss_dssp CTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEE
T ss_pred chhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCE
Confidence 5667777777777765433333 5577788888888887544333 33457788888888887754333334 4567777
Q ss_pred eEecCCCcc
Q 044366 505 KLNLSHNNL 513 (918)
Q Consensus 505 ~L~L~~N~l 513 (918)
...+..+.-
T Consensus 535 i~~~~~~~~ 543 (594)
T 2p1m_B 535 VEVIDERGA 543 (594)
T ss_dssp EEEECSSSC
T ss_pred EEEecCCCc
Confidence 767766643
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.4e-24 Score=229.09 Aligned_cols=206 Identities=26% Similarity=0.328 Sum_probs=131.5
Q ss_pred CCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeecc
Q 044366 118 SLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLF 197 (918)
Q Consensus 118 ~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 197 (918)
+.+++++++++++ .+|..+. ++|++|+|++|+++++.+..|.++++|++|++++|+++.+.+..|..+++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4677777777777 3554443 456677777777666655566666666666666666665555555666666666666
Q ss_pred CcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcC
Q 044366 198 NNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVI 277 (918)
Q Consensus 198 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 277 (918)
+|+++...+..|..+++|++|++++|+++...+..|..+++|++|++++|+++ +..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~------------------------~~~ 149 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ------------------------SLP 149 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC------------------------CCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC------------------------ccC
Confidence 66665544445555555555555555555444444445555555555555444 444
Q ss_pred CCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccC
Q 044366 278 PHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEIS 350 (918)
Q Consensus 278 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 350 (918)
+..|..+++|+.|++++|++.+..+..|.++++|++|++++|.+..++...|..+++|+.|++++|++.|+|.
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 4445555555555555555555555566666777777777777777777778888999999999999999886
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1e-24 Score=230.43 Aligned_cols=209 Identities=28% Similarity=0.338 Sum_probs=111.8
Q ss_pred ccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCC
Q 044366 41 IGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLS 120 (918)
Q Consensus 41 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 120 (918)
+..+++|+.|++++|.++ .+ +.+..+++|++|++++|.+++ ...+..+++|++|++++|.+++..+..|..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~~-~~l~~l~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIK-SV-QGIQYLPNVRYLALGGNKLHD--ISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCC-CC-TTGGGCTTCCEEECTTSCCCC--CGGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcc-cc-cccccCCCCcEEECCCCCCCC--chhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 344444555555554443 22 224444555555555554442 12455555555555555555555444555555555
Q ss_pred EEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcc
Q 044366 121 TLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNS 200 (918)
Q Consensus 121 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 200 (918)
+|+|++|++++..+..++++++|++|++++|++++..+..|+.+++|++|++++|+++++.+..|..+++|++|++++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 55555555554444445555555555555555555555555555555555555555555555555555555566665555
Q ss_pred cccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCcccccc
Q 044366 201 LSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYL 260 (918)
Q Consensus 201 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 260 (918)
+++..+..|..+++|+.|++++|.+.+ .+++|+.|+++.|.+++..|..++.+
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred CCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCccccc
Confidence 555555555555566666666555442 23455556666666665555554443
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=3.7e-24 Score=227.84 Aligned_cols=203 Identities=29% Similarity=0.286 Sum_probs=101.6
Q ss_pred CCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCC
Q 044366 17 IGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLA 96 (918)
Q Consensus 17 ~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~ 96 (918)
++++++++++++++++++ .+|..+. +++++|+|++|++++. .|..|..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~------------------------~~~~~~~l~~L~ 58 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTF------------------------SLATLMPYTRLT 58 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEE------------------------EGGGGTTCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCcc------------------------CHHHhhcCCCCC
Confidence 455555666666665555 4444443 3455555555555433 334444444444
Q ss_pred EEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccc
Q 044366 97 LLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENR 176 (918)
Q Consensus 97 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 176 (918)
+|+|++|.|++..+ ...+++|++|+|++|+++ .+|..+.++++|++|++++|+++++.++.|.++++|++|+|++|+
T Consensus 59 ~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 59 QLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp EEECTTSCCCEEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred EEECCCCccCcccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 44444444443222 144455555555555554 344444555555555555555554444455555555555555555
Q ss_pred cCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCc
Q 044366 177 LSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLY 250 (918)
Q Consensus 177 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 250 (918)
++++++..|..+++|+.|+|++|+++...+..|..+++|+.|+|++|+++. +|..+..+.+|+.|+|++|.+.
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBC
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCcc
Confidence 555544445555555555555555554444444555555555555555552 3333444445555555555543
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=4.1e-24 Score=227.45 Aligned_cols=194 Identities=25% Similarity=0.270 Sum_probs=139.0
Q ss_pred cccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccc
Q 044366 2 LNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNV 81 (918)
Q Consensus 2 l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~ 81 (918)
+++++++++ .+|+.+. +++++|+|++|++++..|..|..+++|++|+|++|++++ +|.. +.+++|++|++++|.+
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l 89 (290)
T 1p9a_G 15 VNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQL 89 (290)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCC
T ss_pred EECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcC
Confidence 678999998 7888765 799999999999998888999999999999999999984 3433 6677777777777777
Q ss_pred cccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCccc
Q 044366 82 SGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVI 161 (918)
Q Consensus 82 ~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~ 161 (918)
+ .+|..+..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+++++.++.|
T Consensus 90 ~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~ 168 (290)
T 1p9a_G 90 Q-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLL 168 (290)
T ss_dssp S-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTT
T ss_pred C-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHh
Confidence 6 566666667777777777777766666666667777777777777665555556666666666666666665555556
Q ss_pred ccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccc
Q 044366 162 GNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLS 202 (918)
Q Consensus 162 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 202 (918)
..+++|++|+|++|+++.+ |..+..+.+|+.|+|++|.+.
T Consensus 169 ~~l~~L~~L~L~~N~l~~i-p~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 169 NGLENLDTLLLQENSLYTI-PKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TTCTTCCEEECCSSCCCCC-CTTTTTTCCCSEEECCSCCBC
T ss_pred cCcCCCCEEECCCCcCCcc-ChhhcccccCCeEEeCCCCcc
Confidence 6666666666666666643 334444555666666666554
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=8.1e-25 Score=231.22 Aligned_cols=208 Identities=27% Similarity=0.343 Sum_probs=106.9
Q ss_pred CCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCce
Q 044366 66 GQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDT 145 (918)
Q Consensus 66 ~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~ 145 (918)
..+.+|++|++++|.++ .+ .++..+++|++|++++|++.+. ..+..+++|++|+|++|++++..+..+.++++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~-~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIK-SV-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKE 113 (272)
T ss_dssp HHHTTCCEEECTTSCCC-CC-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ccccceeeeeeCCCCcc-cc-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCE
Confidence 34455555555555544 12 2345555555555555555432 24455555555555555555444444555555555
Q ss_pred eeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccc
Q 044366 146 LFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQL 225 (918)
Q Consensus 146 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l 225 (918)
|++++|++++..+..|+.+++|++|++++|+++++.+..|..+++|++|++++|++++..+..|..+++|++|++++|++
T Consensus 114 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 193 (272)
T 3rfs_A 114 LVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcC
Confidence 55555555554444455555555555555555555444455555555555555555544444455555555555555555
Q ss_pred cCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCC
Q 044366 226 NGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNL 284 (918)
Q Consensus 226 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 284 (918)
++..+..+..+++|+.|++++|.+.+ .+++|+.|+++.|.+.+.+|..++.+
T Consensus 194 ~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 194 KSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred CccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCccccc
Confidence 55444445555555555555554442 13345555555555555555544443
No 332
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=6.1e-25 Score=253.59 Aligned_cols=187 Identities=16% Similarity=0.194 Sum_probs=146.1
Q ss_pred CCceeeccccceEEEEEEeCCCCEEEEEEcccccccCC----CCChHHHHHHHHHHhhccCCceeeEecccccCCceEEE
Q 044366 649 GEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDE----TANPSEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 649 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 724 (918)
...+.||+|+||.||+|.. .++.+|+|+......... ....+.|.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4456899999999999954 678899998644221111 11134589999999999999999766666677788999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCC
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEP 804 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~ 804 (918)
|||+++|+|.+++.. +..++.|+++||+|||+. +|+||||||+||+++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999975 458999999999999999 9999999999999999 999999999998764
Q ss_pred CCCC-------ceeccccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCC
Q 044366 805 HSSN-------WTEFAGTVGYAAPELAYT--MRATEKYDVYSFGVLALEVIKGYHPG 852 (918)
Q Consensus 805 ~~~~-------~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~vl~el~tg~~p~ 852 (918)
.... .....||+.|||||++.. ..|+..+|+|+.++-..+.+.++.++
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 3221 135678999999999976 56788899999999888888776654
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=5.7e-24 Score=220.23 Aligned_cols=177 Identities=18% Similarity=0.238 Sum_probs=72.5
Q ss_pred CCEEEcccccccccCCccccCCCCCCEEEccCCc-ccccCccccCCCCCCCEEECcC-CcCCCcCCcCCCCCCCCceeec
Q 044366 71 INELVFCHNNVSGRIPSSLGNLSNLALLYLNDNS-LFGSIPIVMGNLKSLSTLDLSQ-NQLNGSIPCSLDNLSNLDTLFL 148 (918)
Q Consensus 71 L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~Ls~-n~i~~~~~~~l~~l~~L~~L~L 148 (918)
|++|++++|++++..+..|.++++|++|++++|+ ++...+..|.++++|++|++++ |+++...+..|.++++|++|++
T Consensus 33 l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l 112 (239)
T 2xwt_C 33 TQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGI 112 (239)
T ss_dssp CCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEE
T ss_pred ccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeC
Confidence 3333333333333333334444444444444443 3333333444444444444444 4444333333444444444444
Q ss_pred cccccccCCCcccccccccC---eeecccc-ccCCcCCccCCCCCCCc-EeeccCcccccCCCccccCCCCcceeecccc
Q 044366 149 YKNSLSGPIPSVIGNLKSLL---QLDLSEN-RLSGLIPLSLSNLSSLT-VMSLFNNSLSGSIPPILGNLKSLSTLGLHIN 223 (918)
Q Consensus 149 ~~n~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n 223 (918)
++|+++++ |+ |..+++|+ +|++++| +++++.+..|.++++|+ +|++++|+++.+.+..|.. ++|+.|++++|
T Consensus 113 ~~n~l~~l-p~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n 189 (239)
T 2xwt_C 113 FNTGLKMF-PD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKN 189 (239)
T ss_dssp EEECCCSC-CC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTC
T ss_pred CCCCCccc-cc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCC
Confidence 44444431 22 33333333 4444444 44444333444444444 4444444444322222322 34444444444
Q ss_pred c-ccCCCCCCCcCC-CcCCeEEcccCcCc
Q 044366 224 Q-LNGVIPPSIGNL-SSLRNLSLFNNRLY 250 (918)
Q Consensus 224 ~-l~~~~~~~~~~l-~~L~~L~Ls~n~l~ 250 (918)
+ ++.+.+..|.++ ++|+.|++++|+++
T Consensus 190 ~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 190 KYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp TTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCcccCCHHHhhccccCCcEEECCCCccc
Confidence 2 443333444444 44444444444444
No 334
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=3.3e-23 Score=216.07 Aligned_cols=182 Identities=27% Similarity=0.270 Sum_probs=158.7
Q ss_pred cceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchhhccccCceecccccccCCCCCCCCCCCcccEEeccC
Q 044366 359 LGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSA 438 (918)
Q Consensus 359 L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 438 (918)
.+.++++++.+. .+|..+. ++++.|+|++|+|.+..+..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 345555655555 4555444 5889999999999988888899999999999999999988888899999999999999
Q ss_pred ccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCc
Q 044366 439 NKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIP 518 (918)
Q Consensus 439 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 518 (918)
|.|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+++++.+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 99998888888999999999999999998888889999999999999999998777789999999999999999999888
Q ss_pred ccccCCCCccEEEccCCcCCCCCCC
Q 044366 519 RCFEEMRSLSWIDISYNELQGPIPN 543 (918)
Q Consensus 519 ~~~~~l~~L~~l~l~~N~l~~~~p~ 543 (918)
..|..+++|+.|++++|+|+|..+.
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCTTSTT
T ss_pred HHHhCCCCCCEEEeeCCceeCCccc
Confidence 8999999999999999999987443
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=2.1e-23 Score=216.01 Aligned_cols=196 Identities=18% Similarity=0.171 Sum_probs=138.8
Q ss_pred CCCEEEcccccccccCCCCcCCCCCCCEEEccccc-ccccCCccccCCCCCCEEEccC-CcccccCccccCCCCCCCEEE
Q 044366 46 QLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNN-VSGRIPSSLGNLSNLALLYLND-NSLFGSIPIVMGNLKSLSTLD 123 (918)
Q Consensus 46 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~-~~~~~p~~l~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~ 123 (918)
+|++|++++|++++..+..|..+++|++|++++|. ++...+..|.++++|++|++++ |+++...+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67777777777764444466677777777777775 6655555677777777777776 777766666777777777777
Q ss_pred CcCCcCCCcCCcCCCCCCCCc---eeecccc-ccccCCCcccccccccC-eeeccccccCCcCCccCCCCCCCcEeeccC
Q 044366 124 LSQNQLNGSIPCSLDNLSNLD---TLFLYKN-SLSGPIPSVIGNLKSLL-QLDLSENRLSGLIPLSLSNLSSLTVMSLFN 198 (918)
Q Consensus 124 Ls~n~i~~~~~~~l~~l~~L~---~L~L~~n-~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 198 (918)
+++|++++ +|. +..+++|+ +|++++| +++++.+..|.++++|+ +|++++|+++.+.+..|.. ++|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 77777774 454 66677776 7777777 77776666777777777 7777777777655555555 6778888888
Q ss_pred cc-cccCCCccccCC-CCcceeecccccccCCCCCCCcCCCcCCeEEcccC
Q 044366 199 NS-LSGSIPPILGNL-KSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNN 247 (918)
Q Consensus 199 N~-l~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 247 (918)
|+ ++.+.+..|.++ ++|+.|++++|+++.+.+. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 84 776666777777 7888888888888754433 4667778877765
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1.5e-25 Score=247.46 Aligned_cols=252 Identities=19% Similarity=0.158 Sum_probs=179.9
Q ss_pred CcccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCC----ccccCCC-CCCEEEcccccccccCCCCcCCC-----CC
Q 044366 1 MLNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIP----PEIGKLN-QLRRLYLDVNQLHGTIPPVIGQL-----SL 70 (918)
Q Consensus 1 ~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p----~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~~ 70 (918)
+++|++|.++|.+|+.+...++|++|||++|++++..+ ..+..++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 36789999999999888888889999999999986666 7788898 89999999999997767777765 88
Q ss_pred CCEEEcccccccccCCccccC----C-CCCCEEEccCCcccccCccccC----C-CCCCCEEECcCCcCCCcC----CcC
Q 044366 71 INELVFCHNNVSGRIPSSLGN----L-SNLALLYLNDNSLFGSIPIVMG----N-LKSLSTLDLSQNQLNGSI----PCS 136 (918)
Q Consensus 71 L~~L~l~~n~~~~~~p~~l~~----l-~~L~~L~L~~n~i~~~~~~~~~----~-l~~L~~L~Ls~n~i~~~~----~~~ 136 (918)
|++|++++|.+++..+..+.. + ++|++|+|++|++++..+..+. . .++|++|+|++|++++.. +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 999999999988766664443 3 7899999999988876665443 3 358888888888887533 233
Q ss_pred CCCCC-CCceeeccccccccCCCccccc----c-cccCeeeccccccCCcC----CccCCC-CCCCcEeeccCcccccCC
Q 044366 137 LDNLS-NLDTLFLYKNSLSGPIPSVIGN----L-KSLLQLDLSENRLSGLI----PLSLSN-LSSLTVMSLFNNSLSGSI 205 (918)
Q Consensus 137 l~~l~-~L~~L~L~~n~l~~~~~~~~~~----l-~~L~~L~Ls~N~l~~~~----~~~~~~-l~~L~~L~L~~N~l~~~~ 205 (918)
+..++ +|++|+|++|++++..+..+.. + ++|++|+|++|.+++.. +..+.. .++|++|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 34454 7888888888887666554443 3 58888888888877532 233433 347777888877776543
Q ss_pred C----ccccCCCCcceeecccccccCCCC-------CCCcCCCcCCeEEcccCcCcCC
Q 044366 206 P----PILGNLKSLSTLGLHINQLNGVIP-------PSIGNLSSLRNLSLFNNRLYGF 252 (918)
Q Consensus 206 ~----~~~~~l~~L~~L~L~~n~l~~~~~-------~~~~~l~~L~~L~Ls~n~l~~~ 252 (918)
+ ..+..+++|+.|+|++|.+..+.+ ..+..+++|+.|++++|++...
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 3 234556677777777776443222 2345555666666666666543
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=9.9e-25 Score=240.90 Aligned_cols=251 Identities=20% Similarity=0.220 Sum_probs=166.0
Q ss_pred EecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCC----ccccCCC-CCCeEEeecccccCccccccCCC-----CCc
Q 044366 266 LEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIP----KSLRNLT-SLERVRFNQNNLYGKVYEAFGDH-----PNL 335 (918)
Q Consensus 266 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----~~l~~l~-~L~~L~l~~n~l~~~~~~~~~~l-----~~L 335 (918)
++++.|.+++.+|..+...++|+.|++++|.+.+..+ ..+.+++ +|++|++++|.+.......+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566666666655555555556666666666665555 5555555 56666666666655554444433 555
Q ss_pred cEEeCCCCccccccCcccccccccceeeccccccccCCCcC----cCCC-CCCcEEEccCceeccccccchhhc-----c
Q 044366 336 TFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPE----IGDS-SKLQVLDLSSNHIFGKIPVQLVKL-----F 405 (918)
Q Consensus 336 ~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~----~~~~-~~L~~L~L~~N~l~~~~~~~~~~l-----~ 405 (918)
++|+|++|.++ +..+.. +..+ ++|++|+|++|+|++..+..+... .
T Consensus 83 ~~L~Ls~n~l~------------------------~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 138 (362)
T 3goz_A 83 TSLNLSGNFLS------------------------YKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPA 138 (362)
T ss_dssp CEEECCSSCGG------------------------GSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCT
T ss_pred cEEECcCCcCC------------------------hHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCC
Confidence 55555555554 333332 3333 677777777777776665555442 4
Q ss_pred ccCceecccccccCCCCCC----CCCCC-cccEEeccCccccccCcccccc----c-cccceecccCcccCCC----Cch
Q 044366 406 SLNKLILSLNQLFGGVPLE----FGTLT-ELQYLDLSANKLSSSIPMSIGN----L-LKLHYLNLSNNQFSHK----IPT 471 (918)
Q Consensus 406 ~L~~L~L~~N~l~~~~~~~----~~~l~-~L~~L~Ls~N~l~~~~~~~~~~----l-~~L~~L~Ls~N~l~~~----~~~ 471 (918)
+|++|+|++|++++..... +..++ +|++|+|++|.|++..+..+.. + ++|+.|+|++|+|++. ++.
T Consensus 139 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~ 218 (362)
T 3goz_A 139 SITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAY 218 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHH
Confidence 7888888888776543322 33444 8999999999998766655543 3 5899999999998764 344
Q ss_pred hhccc-cccceEeccCCcCCCCCch----hccccCCcceEecCCCcccccC-------cccccCCCCccEEEccCCcCCC
Q 044366 472 EFEKL-IHLSELDLSHNILQEEIPP----QICKMESLEKLNLSHNNLSDFI-------PRCFEEMRSLSWIDISYNELQG 539 (918)
Q Consensus 472 ~~~~l-~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~~~~-------~~~~~~l~~L~~l~l~~N~l~~ 539 (918)
.+..+ ++|++|||++|+|++..+. .+..+++|+.|+|++|++.++. +..+..+++|+.||+++|++.+
T Consensus 219 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 219 IFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 55553 5899999999999876553 3466788999999999865543 3467788899999999999886
Q ss_pred C
Q 044366 540 P 540 (918)
Q Consensus 540 ~ 540 (918)
.
T Consensus 299 ~ 299 (362)
T 3goz_A 299 S 299 (362)
T ss_dssp G
T ss_pred c
Confidence 5
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=3.3e-23 Score=223.47 Aligned_cols=179 Identities=20% Similarity=0.204 Sum_probs=82.5
Q ss_pred CCCCEEEcccccccccCCccc--cCCCCCCEEEccCCcccccCc----cccCCCCCCCEEECcCCcCCCcCCcCCCCCCC
Q 044366 69 SLINELVFCHNNVSGRIPSSL--GNLSNLALLYLNDNSLFGSIP----IVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSN 142 (918)
Q Consensus 69 ~~L~~L~l~~n~~~~~~p~~l--~~l~~L~~L~L~~n~i~~~~~----~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~ 142 (918)
++|++|++++|.+.+..|..+ ..+++|++|+|++|++.+..+ ..+..+++|++|+|++|++++..+..++++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 345555555555555555555 555555555555555554322 22334555555555555555444455555555
Q ss_pred Cceeecccccccc---CC-CcccccccccCeeeccccccCCcCCc---cCCCCCCCcEeeccCcccccCCCccccCC---
Q 044366 143 LDTLFLYKNSLSG---PI-PSVIGNLKSLLQLDLSENRLSGLIPL---SLSNLSSLTVMSLFNNSLSGSIPPILGNL--- 212 (918)
Q Consensus 143 L~~L~L~~n~l~~---~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--- 212 (918)
|++|+|++|++.+ .. +..+..+++|++|+|++|+++.+.+. .+..+++|++|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 5555555555432 11 11224445555555555555432111 12344444444444444444434333333
Q ss_pred CCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCc
Q 044366 213 KSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLY 250 (918)
Q Consensus 213 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 250 (918)
++|++|+|++|+++. +|..+. ++|+.|+|++|+++
T Consensus 251 ~~L~~L~Ls~N~l~~-lp~~~~--~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 251 SALNSLNLSFAGLEQ-VPKGLP--AKLRVLDLSSNRLN 285 (310)
T ss_dssp TTCCCEECCSSCCCS-CCSCCC--SCCSCEECCSCCCC
T ss_pred CcCCEEECCCCCCCc-hhhhhc--CCCCEEECCCCcCC
Confidence 344444444444442 222221 34444444444444
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.8e-23 Score=225.51 Aligned_cols=226 Identities=21% Similarity=0.235 Sum_probs=187.9
Q ss_pred CCCCEEeCCCCcccccCCc---cccCCCCCCEEEcccccccccCCCCc--CCCCCCCEEEcccccccccCC----ccccC
Q 044366 21 SKLQYLDLGNNQLSGVIPP---EIGKLNQLRRLYLDVNQLHGTIPPVI--GQLSLINELVFCHNNVSGRIP----SSLGN 91 (918)
Q Consensus 21 ~~L~~L~L~~n~i~~~~p~---~l~~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~l~~n~~~~~~p----~~l~~ 91 (918)
..++.|.+.++.+....-. .+..+++|++|++++|++++..|..+ ..+++|++|++++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3478889988887532111 12345779999999999999999988 999999999999999997555 44567
Q ss_pred CCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCc--C--CcCCCCCCCCceeeccccccccCCCc---ccccc
Q 044366 92 LSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGS--I--PCSLDNLSNLDTLFLYKNSLSGPIPS---VIGNL 164 (918)
Q Consensus 92 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~--~--~~~l~~l~~L~~L~L~~n~l~~~~~~---~~~~l 164 (918)
+++|++|+|++|++.+..+..|..+++|++|+|++|++.+. + +..+..+++|++|+|++|+++..... .++.+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l 223 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG 223 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC
Confidence 99999999999999988889999999999999999998752 2 33457899999999999999743221 35788
Q ss_pred cccCeeeccccccCCcCCccCCCC---CCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCe
Q 044366 165 KSLLQLDLSENRLSGLIPLSLSNL---SSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRN 241 (918)
Q Consensus 165 ~~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 241 (918)
++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|++|+++++ | .+..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-P-QPDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-C-CTTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-c-hhhhCCCccE
Confidence 999999999999999878777776 69999999999999 4566664 7999999999999975 3 3688899999
Q ss_pred EEcccCcCcC
Q 044366 242 LSLFNNRLYG 251 (918)
Q Consensus 242 L~Ls~n~l~~ 251 (918)
|++++|++++
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999874
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=8.6e-23 Score=219.56 Aligned_cols=209 Identities=28% Similarity=0.387 Sum_probs=138.3
Q ss_pred EeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcc
Q 044366 26 LDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSL 105 (918)
Q Consensus 26 L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i 105 (918)
+.+..+.+++.. .+..+++|++|++++|.++ .+| .+..+++|++|++++|.+++. +. +..+++|++|+|++|++
T Consensus 24 ~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 24 IAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPL 97 (308)
T ss_dssp HHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCcee--cHHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcC
Confidence 344445544321 2445666666666666665 344 456666666666666666533 33 66677777777777776
Q ss_pred cccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCccC
Q 044366 106 FGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSL 185 (918)
Q Consensus 106 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 185 (918)
.+. + .+..+++|++|++++|++++. + .+.++++|++|++++|++++..+ ++.+++|++|++++|+++++.+ +
T Consensus 98 ~~~-~-~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l 169 (308)
T 1h6u_A 98 KNV-S-AIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--L 169 (308)
T ss_dssp SCC-G-GGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--G
T ss_pred CCc-h-hhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--h
Confidence 543 2 566777777777777777643 2 26777777777777777775533 7777777777777777776544 7
Q ss_pred CCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCC
Q 044366 186 SNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGF 252 (918)
Q Consensus 186 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 252 (918)
..+++|+.|++++|++++..+ +..+++|++|++++|++++.. .+..+++|+.|++++|++++.
T Consensus 170 ~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 170 ANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp TTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEECC
T ss_pred cCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeecC
Confidence 777778888888887775433 777788888888888887654 367778888888888888753
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=9e-23 Score=219.42 Aligned_cols=192 Identities=27% Similarity=0.385 Sum_probs=90.2
Q ss_pred CCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCcee
Q 044366 67 QLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTL 146 (918)
Q Consensus 67 ~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L 146 (918)
.+.+|++|++++|.++ .+| .+..+++|++|+|++|++.+..+ +..+++|++|+|++|++++. ..+..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEE
Confidence 3444555555555444 222 34445555555555555443222 44455555555555554432 234445555555
Q ss_pred eccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeeccccccc
Q 044366 147 FLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLN 226 (918)
Q Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 226 (918)
++++|+++++. .+..+++|++|++++|+++++.+ +..+++|++|++++|++++..+ +..+++|+.|++++|+++
T Consensus 113 ~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 113 DLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp ECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 55555554331 24445555555555555544322 4444555555555555543222 444555555555555554
Q ss_pred CCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccC
Q 044366 227 GVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLS 274 (918)
Q Consensus 227 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 274 (918)
+..+ +..+++|++|++++|++++.. .+..+++|+.|++++|++.
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred cChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 3322 444455555555555554332 2444455555555555544
No 342
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=1.2e-22 Score=222.97 Aligned_cols=240 Identities=16% Similarity=0.132 Sum_probs=118.2
Q ss_pred CEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCC-ccccCCCCCCE-EEcc
Q 044366 24 QYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIP-SSLGNLSNLAL-LYLN 101 (918)
Q Consensus 24 ~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p-~~l~~l~~L~~-L~L~ 101 (918)
+.++.++++++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|++++|.+.+.+| ..|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 34455555555 445444 2445555555555552222345555555555555555543333 34555555443 3344
Q ss_pred CCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccc-cccccCCCccccccc-ccCeeeccccccCC
Q 044366 102 DNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYK-NSLSGPIPSVIGNLK-SLLQLDLSENRLSG 179 (918)
Q Consensus 102 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~ 179 (918)
.|++....|+.|..+++|++|++++|+++...+..+....++..|++.+ +++..+.+..|..+. .++.|+|++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 4555555555555555555555555555544444444444555555533 445544444554443 35555566665554
Q ss_pred cCCccCCCCCCCcEeecc-CcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCcccc
Q 044366 180 LIPLSLSNLSSLTVMSLF-NNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIG 258 (918)
Q Consensus 180 ~~~~~~~~l~~L~~L~L~-~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 258 (918)
+.+..|. ..+|++|+++ +|.++.+.+++|.++++|++|+|++|+|+.+++..|.++++|+.+++ +.+. ..| .+.
T Consensus 169 i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~ 243 (350)
T 4ay9_X 169 IHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLE 243 (350)
T ss_dssp ECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTT
T ss_pred CChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-Cch
Confidence 4443332 3445555554 34455444445555666666666666665444333333332222222 1232 222 245
Q ss_pred ccCCCCeEecCCC
Q 044366 259 YLKSLSKLEFCAN 271 (918)
Q Consensus 259 ~l~~L~~L~l~~n 271 (918)
.+++|+.+++.++
T Consensus 244 ~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 244 KLVALMEASLTYP 256 (350)
T ss_dssp TCCSCCEEECSCH
T ss_pred hCcChhhCcCCCC
Confidence 5566666666543
No 343
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=3.9e-22 Score=207.91 Aligned_cols=178 Identities=24% Similarity=0.274 Sum_probs=104.7
Q ss_pred CCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEcc
Q 044366 22 KLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLN 101 (918)
Q Consensus 22 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~ 101 (918)
..+++++++++++ .+|..+. ++|++|+|++|++++..|..|..+++|++|++++|.+++..|..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4566777777776 5665554 466677777766665555556666666666666666665555555666666666666
Q ss_pred CCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcC
Q 044366 102 DNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLI 181 (918)
Q Consensus 102 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 181 (918)
+|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+++++.+..|+.+++|++|+|++|+++++.
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 66665555555555666666666666665444444555555555555555555555545555555555555555555555
Q ss_pred CccCCCCCCCcEeeccCcccc
Q 044366 182 PLSLSNLSSLTVMSLFNNSLS 202 (918)
Q Consensus 182 ~~~~~~l~~L~~L~L~~N~l~ 202 (918)
+..|..+++|+.|+|++|.++
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBC
T ss_pred HHHHhCCCCCCEEEeeCCcee
Confidence 555555555555555555554
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=2.5e-24 Score=235.57 Aligned_cols=254 Identities=19% Similarity=0.224 Sum_probs=194.3
Q ss_pred CCCEEeCCCCcccccCCccccCC--CCCCEEEcccccccccCCCCcCCCCCCCEEEccccccccc-CCccccCCCCCCEE
Q 044366 22 KLQYLDLGNNQLSGVIPPEIGKL--NQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGR-IPSSLGNLSNLALL 98 (918)
Q Consensus 22 ~L~~L~L~~n~i~~~~p~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~-~p~~l~~l~~L~~L 98 (918)
.++.||++++++. |..+..+ ++++.|++++|.+.+..+ .+..+++|++|++++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~-~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccch-hhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4788888888876 4567777 888888888888885444 466788888888888888765 77778888889999
Q ss_pred EccCCcccccCccccCCCCCCCEEECcCC-cCCCc-CCcCCCCCCCCceeecccc-ccccC-CCccccccc-ccCeeecc
Q 044366 99 YLNDNSLFGSIPIVMGNLKSLSTLDLSQN-QLNGS-IPCSLDNLSNLDTLFLYKN-SLSGP-IPSVIGNLK-SLLQLDLS 173 (918)
Q Consensus 99 ~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n-~i~~~-~~~~l~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~-~L~~L~Ls 173 (918)
+|++|.+++..+..+..+++|++|+|++| .+++. ++..+.++++|++|++++| .+++. .+..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99988888777888888888999999888 67652 5556778888999999888 88753 456678888 89999999
Q ss_pred ccc--cC-CcCCccCCCCCCCcEeeccCcc-cccCCCccccCCCCcceeeccccc-ccCCCCCCCcCCCcCCeEEcccCc
Q 044366 174 ENR--LS-GLIPLSLSNLSSLTVMSLFNNS-LSGSIPPILGNLKSLSTLGLHINQ-LNGVIPPSIGNLSSLRNLSLFNNR 248 (918)
Q Consensus 174 ~N~--l~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~Ls~n~ 248 (918)
+|. ++ ...+..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 884 44 2345566778889999999988 666667788888999999998885 33222225778889999999988
Q ss_pred CcCCCCcccccc-CCCCeEecCCCccCCcCCCcCCC
Q 044366 249 LYGFVPKEIGYL-KSLSKLEFCANHLSGVIPHSVGN 283 (918)
Q Consensus 249 l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~ 283 (918)
+. ...+..+ .+++.|+++.|++++..|..+..
T Consensus 283 i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 283 VP---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred cC---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 33 3344444 34777888999999888877664
No 345
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=2.8e-24 Score=235.21 Aligned_cols=254 Identities=19% Similarity=0.190 Sum_probs=195.7
Q ss_pred CCCEEEcccccccccCCCCcCCC--CCCCEEEcccccccccCCccccCCCCCCEEEccCCccccc-CccccCCCCCCCEE
Q 044366 46 QLRRLYLDVNQLHGTIPPVIGQL--SLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGS-IPIVMGNLKSLSTL 122 (918)
Q Consensus 46 ~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L 122 (918)
.++.+++++|.+. |..+..+ ..++.|++++|.+.+..+. +..+++|++|++++|.+.+. .|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4788999988776 4556666 7889999999988866554 55789999999999988755 77788888999999
Q ss_pred ECcCCcCCCcCCcCCCCCCCCceeecccc-ccccC-CCcccccccccCeeecccc-ccCCc-CCccCCCCC-CCcEeecc
Q 044366 123 DLSQNQLNGSIPCSLDNLSNLDTLFLYKN-SLSGP-IPSVIGNLKSLLQLDLSEN-RLSGL-IPLSLSNLS-SLTVMSLF 197 (918)
Q Consensus 123 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~Ls~N-~l~~~-~~~~~~~l~-~L~~L~L~ 197 (918)
+|++|++++..+..++++++|++|++++| .+++. .+..+..+++|++|++++| .+++. .+..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999888777788888899999999998 67642 4566788899999999999 88754 355677888 89999999
Q ss_pred Ccc--cc-cCCCccccCCCCcceeeccccc-ccCCCCCCCcCCCcCCeEEcccCc-CcCCCCccccccCCCCeEecCCCc
Q 044366 198 NNS--LS-GSIPPILGNLKSLSTLGLHINQ-LNGVIPPSIGNLSSLRNLSLFNNR-LYGFVPKEIGYLKSLSKLEFCANH 272 (918)
Q Consensus 198 ~N~--l~-~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~l~~n~ 272 (918)
+|. ++ ..++..+..+++|++|++++|. ++...+..+..+++|++|++++|. +.......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 984 44 3446677788899999999998 666666778888999999999985 32222235778889999999988
Q ss_pred cCCcCCCcCCCC-CCCcEEEccCCcCcCCCCccccC
Q 044366 273 LSGVIPHSVGNL-TGLVLLNMCENHLFGPIPKSLRN 307 (918)
Q Consensus 273 l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~l~~ 307 (918)
+. ...+..+ ..+..|++++|++++..|..+..
T Consensus 283 i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 283 VP---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred cC---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 33 3334444 23677778889998888877654
No 346
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.5e-25 Score=250.06 Aligned_cols=241 Identities=19% Similarity=0.218 Sum_probs=134.0
Q ss_pred CCccccCCCCCCEEEccccccccc----CCCCcCCCCCCCEEEcccc---cccccCCccc-------cCCCCCCEEEccC
Q 044366 37 IPPEIGKLNQLRRLYLDVNQLHGT----IPPVIGQLSLINELVFCHN---NVSGRIPSSL-------GNLSNLALLYLND 102 (918)
Q Consensus 37 ~p~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~l~~n---~~~~~~p~~l-------~~l~~L~~L~L~~ 102 (918)
++..+..+++|++|+|++|++++. ++..+..+++|++|++++| ++++.+|.++ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 344444444444444444444432 2222334444444444442 2223333333 4556666666666
Q ss_pred Ccccc----cCccccCCCCCCCEEECcCCcCCCcCCcCC----CCC---------CCCceeeccccccc-cCCC---ccc
Q 044366 103 NSLFG----SIPIVMGNLKSLSTLDLSQNQLNGSIPCSL----DNL---------SNLDTLFLYKNSLS-GPIP---SVI 161 (918)
Q Consensus 103 n~i~~----~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l----~~l---------~~L~~L~L~~n~l~-~~~~---~~~ 161 (918)
|.+.. .+|..+..+++|++|+|++|.++...+..+ ..+ ++|++|+|++|+++ ...+ ..|
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 66654 245555566666666666666653322222 222 56666666666665 2222 345
Q ss_pred ccccccCeeeccccccCC-----cCCccCCCCCCCcEeeccCcccc----cCCCccccCCCCcceeecccccccCC----
Q 044366 162 GNLKSLLQLDLSENRLSG-----LIPLSLSNLSSLTVMSLFNNSLS----GSIPPILGNLKSLSTLGLHINQLNGV---- 228 (918)
Q Consensus 162 ~~l~~L~~L~Ls~N~l~~-----~~~~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~L~~n~l~~~---- 228 (918)
..+++|++|+|++|+++. +.+..+..+++|+.|+|++|.++ ..+|..+..+++|+.|+|++|.++..
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 566677777777776662 23335666677777777777764 34555666777777777777776643
Q ss_pred CCCCC--cCCCcCCeEEcccCcCcC----CCCccc-cccCCCCeEecCCCccCCcC
Q 044366 229 IPPSI--GNLSSLRNLSLFNNRLYG----FVPKEI-GYLKSLSKLEFCANHLSGVI 277 (918)
Q Consensus 229 ~~~~~--~~l~~L~~L~Ls~n~l~~----~~~~~~-~~l~~L~~L~l~~n~l~~~~ 277 (918)
++..+ ..+++|++|+|++|.+++ ..|..+ ..+++|++|++++|++.+..
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 23334 236777777777777765 244444 45677777777777777554
No 347
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=5.3e-25 Score=245.65 Aligned_cols=241 Identities=18% Similarity=0.222 Sum_probs=104.7
Q ss_pred CCCCcCCCCCCCEEEcccccccccCC----ccccCCCCCCEEEccCCcc---cccCcccc-------CCCCCCCEEECcC
Q 044366 61 IPPVIGQLSLINELVFCHNNVSGRIP----SSLGNLSNLALLYLNDNSL---FGSIPIVM-------GNLKSLSTLDLSQ 126 (918)
Q Consensus 61 ~p~~~~~l~~L~~L~l~~n~~~~~~p----~~l~~l~~L~~L~L~~n~i---~~~~~~~~-------~~l~~L~~L~Ls~ 126 (918)
++..+..+++|++|++++|.+....+ ..|..+++|++|+|++|.+ .+..|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 44444444555555555555443322 2234445555555554322 22223222 3445555555555
Q ss_pred CcCCC----cCCcCCCCCCCCceeeccccccccCCCcccc----cc---------cccCeeeccccccCC-cCC---ccC
Q 044366 127 NQLNG----SIPCSLDNLSNLDTLFLYKNSLSGPIPSVIG----NL---------KSLLQLDLSENRLSG-LIP---LSL 185 (918)
Q Consensus 127 n~i~~----~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~----~l---------~~L~~L~Ls~N~l~~-~~~---~~~ 185 (918)
|+++. .+|..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++|+++. ..+ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 55543 2333444445555555555554422222222 22 455555555555441 111 233
Q ss_pred CCCCCCcEeeccCccccc-----CCCccccCCCCcceeeccccccc----CCCCCCCcCCCcCCeEEcccCcCcCC----
Q 044366 186 SNLSSLTVMSLFNNSLSG-----SIPPILGNLKSLSTLGLHINQLN----GVIPPSIGNLSSLRNLSLFNNRLYGF---- 252 (918)
Q Consensus 186 ~~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~Ls~n~l~~~---- 252 (918)
..+++|++|+|++|+++. ..+..+..+++|+.|+|++|.++ ..++..+..+++|++|+|++|.+++.
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 344455555555554441 12224444555555555555543 22333444445555555555554432
Q ss_pred CCcccc--ccCCCCeEecCCCccCC----cCCCcC-CCCCCCcEEEccCCcCcCCC
Q 044366 253 VPKEIG--YLKSLSKLEFCANHLSG----VIPHSV-GNLTGLVLLNMCENHLFGPI 301 (918)
Q Consensus 253 ~~~~~~--~l~~L~~L~l~~n~l~~----~~~~~~-~~l~~L~~L~l~~n~l~~~~ 301 (918)
.+..+. .+++|++|++++|.+.. ..|..+ .++++|+.|++++|++++..
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 122221 14455555555555544 133333 33455555555555554433
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=1.2e-21 Score=215.05 Aligned_cols=238 Identities=18% Similarity=0.150 Sum_probs=123.9
Q ss_pred EEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcC-CcCCCCCCCCce-eecccc
Q 044366 74 LVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSI-PCSLDNLSNLDT-LFLYKN 151 (918)
Q Consensus 74 L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~-~~~l~~l~~L~~-L~L~~n 151 (918)
++.++++++ .+|..+. +++++|+|++|+|+.+.+++|.++++|++|+|++|++.+.+ +.+|.++++|++ +.+++|
T Consensus 14 v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N 90 (350)
T 4ay9_X 14 FLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 90 (350)
T ss_dssp EEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEET
T ss_pred EEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCC
Confidence 344444444 4444432 45555555555555444445555555555555555554333 234555555443 344455
Q ss_pred ccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccC-cccccCCCccccCCC-CcceeecccccccCCC
Q 044366 152 SLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFN-NSLSGSIPPILGNLK-SLSTLGLHINQLNGVI 229 (918)
Q Consensus 152 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~ 229 (918)
+++.+.++.|..+++|++|++++|+++.+.+..+....++..|++.+ |.+..+.+..|..+. .++.|+|++|+|+.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~ 170 (350)
T 4ay9_X 91 NLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIH 170 (350)
T ss_dssp TCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEEC
T ss_pred cccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCC
Confidence 55555555556666666666666666555555555555555555543 345544444555543 4555666666665443
Q ss_pred CCCCcCCCcCCeEEccc-CcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCC
Q 044366 230 PPSIGNLSSLRNLSLFN-NRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNL 308 (918)
Q Consensus 230 ~~~~~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l 308 (918)
+..|. ..+|+.|++++ |.++.+.++.|..+++|+.|++++|+|+.+.+..|.++++|+.+ ++.-...+| .+.++
T Consensus 171 ~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l---~~~~l~~lP-~l~~l 245 (350)
T 4ay9_X 171 NSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRAR---STYNLKKLP-TLEKL 245 (350)
T ss_dssp TTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECT---TCTTCCCCC-CTTTC
T ss_pred hhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhc---cCCCcCcCC-CchhC
Confidence 33332 34566666653 45555555556666666666666666665555444443333332 222222344 35666
Q ss_pred CCCCeEEeecc
Q 044366 309 TSLERVRFNQN 319 (918)
Q Consensus 309 ~~L~~L~l~~n 319 (918)
++|+.+++.++
T Consensus 246 ~~L~~l~l~~~ 256 (350)
T 4ay9_X 246 VALMEASLTYP 256 (350)
T ss_dssp CSCCEEECSCH
T ss_pred cChhhCcCCCC
Confidence 67777766543
No 349
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=8.5e-22 Score=208.02 Aligned_cols=156 Identities=18% Similarity=0.142 Sum_probs=122.2
Q ss_pred HHHHHHhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCC--C------------CChHHHHHHHHHHhhcc
Q 044366 639 EEITKATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDE--T------------ANPSEFLNEVLALTEIR 704 (918)
Q Consensus 639 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--~------------~~~~~~~~e~~~l~~l~ 704 (918)
..+......|...+.||+|+||.||+|...+|+.||||.++....... . .....+.+|+++++.++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344455566778899999999999999778899999999865321111 0 12456899999999999
Q ss_pred CCceeeEecccccCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCee
Q 044366 705 HRNIIKFHGFCSNAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVL 784 (918)
Q Consensus 705 h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 784 (918)
| +++.+++.. +..++||||+++|+|.+ +.. .+...++.|++.||+|||+. +|+||||||+||+
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NIL 225 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVL 225 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEE
Confidence 4 666665533 56799999999999998 432 12457999999999999999 9999999999999
Q ss_pred eCCCCcEEEeccccccccCCCCCCceecccccccccccccc
Q 044366 785 LDSEYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAY 825 (918)
Q Consensus 785 l~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~ 825 (918)
++ ++.+||+|||+|+.. ..|+|||++.
T Consensus 226 l~-~~~vkl~DFG~a~~~-------------~~~~a~e~l~ 252 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVEV-------------GEEGWREILE 252 (282)
T ss_dssp EE-TTEEEECCCTTCEET-------------TSTTHHHHHH
T ss_pred EE-CCcEEEEECCCCeEC-------------CCCCHHHHHH
Confidence 99 999999999999743 3478898874
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.7e-20 Score=189.41 Aligned_cols=141 Identities=30% Similarity=0.370 Sum_probs=64.1
Q ss_pred ccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccC
Q 044366 89 LGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLL 168 (918)
Q Consensus 89 l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 168 (918)
|..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..+.++++|++|++++|+++++.+..|..+++|+
T Consensus 48 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 127 (208)
T 2o6s_A 48 FDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLK 127 (208)
T ss_dssp TTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCC
Confidence 34444444444444444433333344444444444444444433333344444444444444444444444444444444
Q ss_pred eeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCC
Q 044366 169 QLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNL 236 (918)
Q Consensus 169 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 236 (918)
+|++++|+++++.+..|..+++|++|++++|.+.+ .+++|+.|+++.|++++.+|..++.+
T Consensus 128 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 128 DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred EEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 55554444444444444444455555555444331 23344455555555554444444433
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.6e-20 Score=189.66 Aligned_cols=181 Identities=24% Similarity=0.281 Sum_probs=118.3
Q ss_pred CEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCC
Q 044366 24 QYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDN 103 (918)
Q Consensus 24 ~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n 103 (918)
+.++.+++.++ .+|..+ .++|++|++++|++++..+..++.+++|++|++++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45566666665 445433 346666666666666444444566666666666666666544455666777777777777
Q ss_pred cccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCc
Q 044366 104 SLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPL 183 (918)
Q Consensus 104 ~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 183 (918)
++++..+..|..+++|++|++++|++++..+..+.++++|++|++++|+++++.+..|..+++|++|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 7766655566777777777777777776555566777777777777777776666667777777777777776553
Q ss_pred cCCCCCCCcEeeccCcccccCCCccccCCCC
Q 044366 184 SLSNLSSLTVMSLFNNSLSGSIPPILGNLKS 214 (918)
Q Consensus 184 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 214 (918)
.+++|++|+++.|++++.+|..++.++.
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3456777777777777777776665544
No 352
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=5.7e-21 Score=194.30 Aligned_cols=156 Identities=22% Similarity=0.275 Sum_probs=121.3
Q ss_pred cEEEccCceeccccccchhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCc
Q 044366 384 QVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNN 463 (918)
Q Consensus 384 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 463 (918)
+.+++++|.++. +|..+. ++|+.|+|++|+++++.+..|..+++|++|+|++|.|+++.|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 345555665553 333332 46677777777777677777788888888888888888777888888888888888888
Q ss_pred ccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCC
Q 044366 464 QFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIP 542 (918)
Q Consensus 464 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 542 (918)
+|+.+.+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|+++.+..|..+++|+.|++++|+|.|.++
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 8887777778888888888888888888778888888888888888888888888888888888888888888887654
No 353
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=7e-21 Score=193.66 Aligned_cols=156 Identities=20% Similarity=0.205 Sum_probs=123.2
Q ss_pred EEEccCceeccccccchhhccccCceecccccccCCCC-CCCCCCCcccEEeccCccccccCccccccccccceecccCc
Q 044366 385 VLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGGVP-LEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNN 463 (918)
Q Consensus 385 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 463 (918)
.+++++|.++. +|..+. ..++.|+|++|++++..+ ..|..+++|++|+|++|.|+++.+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 55556665553 333332 234666677776666543 45777888888888888888777778888888888888888
Q ss_pred ccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCCC
Q 044366 464 QFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPN 543 (918)
Q Consensus 464 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 543 (918)
+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|+++.|..|..+++|+.|++++|+|+|.++.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 88888888888888999999999999888888888888999999999999888888899999999999999999987764
No 354
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=4.7e-21 Score=211.09 Aligned_cols=180 Identities=26% Similarity=0.274 Sum_probs=151.9
Q ss_pred ceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchh-hccccCceecccccccCCCCCCCCCCCcccEEeccC
Q 044366 360 GTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLV-KLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSA 438 (918)
Q Consensus 360 ~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 438 (918)
+.+++++|++. .+|..+. ..++.|+|++|+|++..+..|. ++++|+.|+|++|+|+++.+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 35666666665 3555443 4588999999999888888887 889999999999999988888899999999999999
Q ss_pred ccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhc---cccCCcceEecCCCcccc
Q 044366 439 NKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQI---CKMESLEKLNLSHNNLSD 515 (918)
Q Consensus 439 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~ 515 (918)
|+|+++.+..|..+++|+.|+|++|+|+++.|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99998878889999999999999999998888999999999999999999987666666 568999999999999998
Q ss_pred cCcccccCCCCc--cEEEccCCcCCCCCC
Q 044366 516 FIPRCFEEMRSL--SWIDISYNELQGPIP 542 (918)
Q Consensus 516 ~~~~~~~~l~~L--~~l~l~~N~l~~~~p 542 (918)
+.+..|..++.+ +.|+|++|+|+|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred cCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 888888888874 889999999998764
No 355
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=5.3e-20 Score=188.53 Aligned_cols=157 Identities=26% Similarity=0.312 Sum_probs=128.2
Q ss_pred CcEEEccCceeccccccchhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccC
Q 044366 383 LQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSN 462 (918)
Q Consensus 383 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 462 (918)
-+.++.+++++. .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|.|+.+.+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 456777777776 3343333 6778888888888887788888888888888888888877667788888889999999
Q ss_pred cccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCC
Q 044366 463 NQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIP 542 (918)
Q Consensus 463 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 542 (918)
|+|+++.+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|+++.+..|..+++|+.|++++|+|+|.++
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9888777778888889999999999987 677888888899999999999988877888889999999999999998876
Q ss_pred C
Q 044366 543 N 543 (918)
Q Consensus 543 ~ 543 (918)
.
T Consensus 177 ~ 177 (229)
T 3e6j_A 177 D 177 (229)
T ss_dssp G
T ss_pred h
Confidence 3
No 356
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=3.1e-20 Score=213.92 Aligned_cols=188 Identities=22% Similarity=0.279 Sum_probs=116.6
Q ss_pred CCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCcccccccccceeecc
Q 044366 286 GLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNAS 365 (918)
Q Consensus 286 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~ 365 (918)
+|+.|++++|.+++ +|..+ .++|+.|++++|.|..++ ..+++|++|++++|.|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~~ip----~~l~~L~~L~Ls~N~l-------------------- 112 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALISLP----ELPASLEYLDACDNRL-------------------- 112 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCC--------------------
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCcccc----cccCCCCEEEccCCCC--------------------
Confidence 56666666666654 33323 144555555555555443 2234455555554444
Q ss_pred ccccccCCCcCcCCCCCCcEEEccCceeccccccchhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccC
Q 044366 366 MNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSI 445 (918)
Q Consensus 366 ~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 445 (918)
.+ +|. +.. +|++|+|++|+|++ +|. .+++|+.|+|++|+++++ |. .+++|++|+|++|.|++ +
T Consensus 113 ----~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 113 ----ST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTML-PE---LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp ----SC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-C
T ss_pred ----CC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcC-CC---cCCCcCEEECCCCCCCC-c
Confidence 43 444 433 67777777777765 333 456777777777777653 33 45677777777777775 4
Q ss_pred ccccccccccceecccCcccCCCCchhhcccccc-------ceEeccCCcCCCCCchhccccCCcceEecCCCcccccCc
Q 044366 446 PMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHL-------SELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIP 518 (918)
Q Consensus 446 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 518 (918)
|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|
T Consensus 176 p~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 176 PE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred ch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 44 55 77777788777776 3444 544 56 78888888887 466666667888888888888877777
Q ss_pred ccccCCC
Q 044366 519 RCFEEMR 525 (918)
Q Consensus 519 ~~~~~l~ 525 (918)
..+..+.
T Consensus 248 ~~l~~l~ 254 (571)
T 3cvr_A 248 ESLSQQT 254 (571)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 7766653
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=3.3e-20 Score=197.51 Aligned_cols=190 Identities=25% Similarity=0.407 Sum_probs=138.7
Q ss_pred CCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccC
Q 044366 23 LQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLND 102 (918)
Q Consensus 23 L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~ 102 (918)
+..+.+..+.+++. ..+..+++|++|++++|.++ .+| .+..+++|++|++++|.+++..+ +..+++|++|++++
T Consensus 26 ~~~~~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSE--ECHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccc--cchhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 34445666666533 23456777777777777776 343 36677777777777777774333 77778888888888
Q ss_pred CcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCC
Q 044366 103 NSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIP 182 (918)
Q Consensus 103 n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 182 (918)
|++++ .| .+..+++|++|++++|++++. ..+..+++|++|++++|+++++ ..++.+++|++|++++|+++++.+
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 88764 23 477888888888888888753 4677788888888888888765 577888888888888888887655
Q ss_pred ccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCC
Q 044366 183 LSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGV 228 (918)
Q Consensus 183 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 228 (918)
+..+++|++|++++|.+++. + .+..+++|+.|++++|+++..
T Consensus 174 --l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred --hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCC
Confidence 78888888888888888754 3 478888888888888888754
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=3.6e-20 Score=197.20 Aligned_cols=190 Identities=27% Similarity=0.407 Sum_probs=123.8
Q ss_pred CCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcC
Q 044366 47 LRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQ 126 (918)
Q Consensus 47 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 126 (918)
+..+.+..+.+++. ..+..+++|++|++++|.+.. ++ .+..+++|++|+|++|++++..+ +..+++|++|++++
T Consensus 26 ~~~~~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSE--ECHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccc--cchhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 33344555554422 123456677777777777663 33 36677777777777777765443 67777777777777
Q ss_pred CcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCCC
Q 044366 127 NQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIP 206 (918)
Q Consensus 127 n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 206 (918)
|++++ ++ .+..+++|++|++++|+++++ ..+..+++|++|++++|+++++ ..+..+++|++|++++|++++..+
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 77764 22 367777777777777777654 4566777777777777777765 456677777777777777765443
Q ss_pred ccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCC
Q 044366 207 PILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGF 252 (918)
Q Consensus 207 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 252 (918)
+..+++|+.|++++|.++.. ..+..+++|+.|++++|+++..
T Consensus 174 --l~~l~~L~~L~L~~N~i~~l--~~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEEEEEEEEECC
T ss_pred --hcCCCccCEEECCCCcCCCC--hhhccCCCCCEEECcCCcccCC
Confidence 67777777777777777654 2366777777777777777643
No 359
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=7.8e-20 Score=210.58 Aligned_cols=189 Identities=26% Similarity=0.292 Sum_probs=125.7
Q ss_pred CCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECc
Q 044366 46 QLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLS 125 (918)
Q Consensus 46 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls 125 (918)
+|+.|+|++|++++ +|..+. ++|++|++++|.++ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 66666666666653 555442 55666666666666 455 335677777777777765 444 444 67777777
Q ss_pred CCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCC
Q 044366 126 QNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSI 205 (918)
Q Consensus 126 ~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 205 (918)
+|+|++ +|. .+++|++|+|++|+++++ |. .+++|++|+|++|+++++ |. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls~N~L~~l-p~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTML-PE---LPTSLEVLSVRNNQLTFL-PE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSCC-CC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCcC-CC---cCCCcCEEECCCCCCCCc-ch-hh--CCCCEEECcCCCCC-ch
Confidence 777775 444 466777777777777753 33 456777777777777764 33 54 77777777777777 34
Q ss_pred CccccCCCCc-------ceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCC
Q 044366 206 PPILGNLKSL-------STLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKS 262 (918)
Q Consensus 206 ~~~~~~l~~L-------~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 262 (918)
|. |.. +| +.|+|++|+|+. +|..+..+++|+.|+|++|++++..|..+..+..
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 44 443 56 888888888884 5666777888999999999888877777766543
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=8.9e-20 Score=212.69 Aligned_cols=198 Identities=25% Similarity=0.399 Sum_probs=134.8
Q ss_pred CCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccC
Q 044366 23 LQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLND 102 (918)
Q Consensus 23 L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~ 102 (918)
+..+.++.+.+.+..+ +..+.+|+.|++++|.+. .+| .+..+++|++|+|++|.+.+..| +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 4445566666653322 556666666677666665 343 46666777777777776664333 67777777777777
Q ss_pred CcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCC
Q 044366 103 NSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIP 182 (918)
Q Consensus 103 n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 182 (918)
|.+.+ +| .+..+++|++|+|++|++++. ..+..+++|+.|+|++|+++++ ..|+.+++|+.|+|++|+++++.|
T Consensus 97 N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 77764 22 577777777777777777743 3577777777777777777755 567777888888888888877655
Q ss_pred ccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCC
Q 044366 183 LSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNL 236 (918)
Q Consensus 183 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 236 (918)
+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|.+...+...+..+
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l 220 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNL 220 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSC
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccE
Confidence 77778888888888888754 357778888888888888776544333333
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=2.3e-19 Score=182.39 Aligned_cols=158 Identities=22% Similarity=0.365 Sum_probs=105.1
Q ss_pred EeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCc
Q 044366 193 VMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANH 272 (918)
Q Consensus 193 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~ 272 (918)
.+++++|.++. +|..+. ++|+.|++++|.++.+.+..|.++++|++|+|++|+++++.|..|..+++|++|+|++|+
T Consensus 15 ~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 44444444442 232222 345555555555555544555555666666666666665555666666666666666666
Q ss_pred cCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCcc
Q 044366 273 LSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFN 352 (918)
Q Consensus 273 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 352 (918)
|..+.+..|.++++|+.|++++|++.+..|..|.++++|+.|++++|.+..+++..|..+++|+.|+|++|+|.|+|...
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l~ 171 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLK 171 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGGH
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCccH
Confidence 66555555666667777777777777666777777777888888888888888888888999999999999999988754
Q ss_pred c
Q 044366 353 W 353 (918)
Q Consensus 353 ~ 353 (918)
|
T Consensus 172 ~ 172 (220)
T 2v9t_B 172 W 172 (220)
T ss_dssp H
T ss_pred H
Confidence 4
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.3e-19 Score=211.45 Aligned_cols=171 Identities=29% Similarity=0.464 Sum_probs=78.6
Q ss_pred CCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCcee
Q 044366 67 QLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTL 146 (918)
Q Consensus 67 ~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L 146 (918)
.+.+|++|++++|.+. .+| .|..+++|+.|+|++|++.+..| +..+++|+.|+|++|++++ +| .+..+++|++|
T Consensus 41 ~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L 114 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSL 114 (605)
T ss_dssp HHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEE
T ss_pred cCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEE
Confidence 4444444455444444 222 34444555555555554443322 4444455555555554442 11 34444445555
Q ss_pred eccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeeccccccc
Q 044366 147 FLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLN 226 (918)
Q Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 226 (918)
+|++|+++++ ..+..+++|+.|+|++|+++++ ..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|+++
T Consensus 115 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 115 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp ECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 5555544432 2344444555555555544443 234444445555555554443333 444445555555555444
Q ss_pred CCCCCCCcCCCcCCeEEcccCcCcC
Q 044366 227 GVIPPSIGNLSSLRNLSLFNNRLYG 251 (918)
Q Consensus 227 ~~~~~~~~~l~~L~~L~Ls~n~l~~ 251 (918)
+. ..+..+++|+.|+|++|++.+
T Consensus 189 ~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 189 DL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp BC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CC--hHHccCCCCCEEEccCCcCcC
Confidence 32 234444445555555544443
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=1.5e-19 Score=198.96 Aligned_cols=112 Identities=28% Similarity=0.323 Sum_probs=43.8
Q ss_pred CCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCee
Q 044366 91 NLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQL 170 (918)
Q Consensus 91 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 170 (918)
.+++|++|+|++|+|++..+..|.++++|++|+|++|+|+...+..|.++++|++|+|++|+|+++.+..|.++++|++|
T Consensus 62 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 141 (361)
T 2xot_A 62 RLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKL 141 (361)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEE
Confidence 33344444444444433333334444444444444444443333333444444444444444443333344444444444
Q ss_pred eccccccCCcCCccC---CCCCCCcEeeccCcccc
Q 044366 171 DLSENRLSGLIPLSL---SNLSSLTVMSLFNNSLS 202 (918)
Q Consensus 171 ~Ls~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~ 202 (918)
+|++|+++++.+..| ..+++|+.|+|++|+|+
T Consensus 142 ~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 142 YLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp ECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred ECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 444444443333222 22344444444444444
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=6.3e-19 Score=179.15 Aligned_cols=111 Identities=28% Similarity=0.394 Sum_probs=42.8
Q ss_pred cCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCc
Q 044366 113 MGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLT 192 (918)
Q Consensus 113 ~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 192 (918)
|..+++|++|+|++|+|++..+..|.++++|++|+|++|+++++.+..|.++++|++|+|++|+++++.|..|..+++|+
T Consensus 53 ~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 132 (220)
T 2v70_A 53 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVR 132 (220)
T ss_dssp GGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCS
T ss_pred hccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCC
Confidence 33334444444444444333333333333344444444433333333333344444444444444333333333333333
Q ss_pred EeeccCcccccCCCccccCCCCcceeecccc
Q 044366 193 VMSLFNNSLSGSIPPILGNLKSLSTLGLHIN 223 (918)
Q Consensus 193 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n 223 (918)
+|+|++|++++..|..|..+++|+.|+|++|
T Consensus 133 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 163 (220)
T 2v70_A 133 LLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 163 (220)
T ss_dssp EEECTTSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEECCCCcCCEECHHHhcCCCCCCEEEecCc
Confidence 3333333333333333333333333333333
No 365
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=8.1e-20 Score=198.62 Aligned_cols=221 Identities=13% Similarity=0.066 Sum_probs=124.8
Q ss_pred CCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeecccc----ccCCcCCccCCCCCCC
Q 044366 116 LKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSEN----RLSGLIPLSLSNLSSL 191 (918)
Q Consensus 116 l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N----~l~~~~~~~~~~l~~L 191 (918)
+++|++|+|.+ .++.+.+.+|.++++|++|++.+|.+..+.+.+|.++.++..+.+..+ ....+...+|.++.+|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 55555555554 444444444555555555555555554444455555444444444432 1222333445555555
Q ss_pred c-EeeccCccc-ccCCCccccCCCCcceeecccccccCCCCCCC-cCCCcCCeEEcccCcCcCCCCccccccCCCCeEec
Q 044366 192 T-VMSLFNNSL-SGSIPPILGNLKSLSTLGLHINQLNGVIPPSI-GNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEF 268 (918)
Q Consensus 192 ~-~L~L~~N~l-~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l 268 (918)
+ .+.+....- .......-....++..+.+.++-.. .....+ ..+++|+.|+|++|+++.+.+.+|.++.+|+++++
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 5 344332211 0000000112344455554443211 100111 13567777777777777777777777777777777
Q ss_pred CCCccCCcCCCcCCCCCCCc-EEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeC
Q 044366 269 CANHLSGVIPHSVGNLTGLV-LLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDL 340 (918)
Q Consensus 269 ~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 340 (918)
.+| +..+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+++++++|.+..+...+|.++++|+.++.
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 776 6667777777777777 777777 666667778888888888888888888888888888888887763
No 366
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=2.8e-19 Score=194.34 Aligned_cols=218 Identities=12% Similarity=0.057 Sum_probs=101.8
Q ss_pred CCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcc----cccCCCccccCCCCc
Q 044366 140 LSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNS----LSGSIPPILGNLKSL 215 (918)
Q Consensus 140 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~----l~~~~~~~~~~l~~L 215 (918)
+++|++|+|.+ .++.+.+.+|.++++|+.|++++|.+..+.+.+|.++.++..+.+..+. ...+...+|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 55555555554 4444444455555555555555555444444455444444444443321 111222333344444
Q ss_pred c-eeecccccc-cCCCCCCCcCCCcCCeEEcccCcCcCCCCccc-cccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEc
Q 044366 216 S-TLGLHINQL-NGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEI-GYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNM 292 (918)
Q Consensus 216 ~-~L~L~~n~l-~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 292 (918)
+ .+.+....- .......--...+++.+.+.++-.. .....+ ..+++|+.+++++|.+..+.+.+|.++++|+.+++
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 3 222221110 0000000011234444444443111 111111 12566666666666666666666666666666666
Q ss_pred cCCcCcCCCCccccCCCCCC-eEEeecccccCccccccCCCCCccEEeCCCCccccccCcccccccccce
Q 044366 293 CENHLFGPIPKSLRNLTSLE-RVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGT 361 (918)
Q Consensus 293 ~~n~l~~~~~~~l~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 361 (918)
.+| +..+.+.+|.++.+|+ .+.+.+ .+..+...+|.++++|+.+++++|.++.+....|.++++|+.
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ 325 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKL 325 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCE
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhh
Confidence 665 5555556666666666 666655 555666666666666666666655555544444444444443
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=4.2e-18 Score=174.35 Aligned_cols=134 Identities=32% Similarity=0.388 Sum_probs=74.0
Q ss_pred CCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeec
Q 044366 69 SLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFL 148 (918)
Q Consensus 69 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 148 (918)
++|++|++++|.+++..|..|..+++|++|+|++|+|....+..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 33444444444444444444555555555555555555444444555555555555555555444444555555666666
Q ss_pred cccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCccccc
Q 044366 149 YKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSG 203 (918)
Q Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 203 (918)
++|+++ .+|..+..+++|++|+|++|+++++.+..|..+++|+.|+|++|.+..
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 666555 334555566666666666666665555556666666666666666553
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=1.6e-19 Score=189.02 Aligned_cols=169 Identities=25% Similarity=0.325 Sum_probs=98.2
Q ss_pred CCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEE
Q 044366 20 LSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLY 99 (918)
Q Consensus 20 l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~ 99 (918)
+.++..++++++.+++ ++ .+..+++|++|++++|+++ .+| .+..+++|++|++++|.+++..+ +..+++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 4556666677777663 33 4666777777777777666 444 45566666666666666653332 66666666666
Q ss_pred ccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCC
Q 044366 100 LNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSG 179 (918)
Q Consensus 100 L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 179 (918)
|++|++++. |. +.. ++|++|+|++|++++. ..+.++++|++|++++|+++++ ..++.+++|++|++++|++++
T Consensus 92 L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~--~~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI--VMLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC--GGGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCCc-Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC--hHHccCCCCCEEECCCCcCcc
Confidence 666666542 22 222 5666666666666542 2355566666666666666543 245556666666666666655
Q ss_pred cCCccCCCCCCCcEeeccCccccc
Q 044366 180 LIPLSLSNLSSLTVMSLFNNSLSG 203 (918)
Q Consensus 180 ~~~~~~~~l~~L~~L~L~~N~l~~ 203 (918)
. ..+..+++|+.|++++|.++.
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEEC
T ss_pred h--HHhccCCCCCEEeCCCCcccC
Confidence 4 445555566666666665553
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=7.8e-19 Score=183.76 Aligned_cols=165 Identities=24% Similarity=0.342 Sum_probs=145.2
Q ss_pred cccCCCCCCccCCccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccc
Q 044366 2 LNLGFNLLFGNIPPQIGNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNV 81 (918)
Q Consensus 2 l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~ 81 (918)
|++++|.++ .+| .+.++++|++|++++|+++ .+| .+..+++|++|+|++|+++ .+|. +..+++|++|++++|++
T Consensus 24 l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~-~~~~-l~~l~~L~~L~L~~N~l 97 (263)
T 1xeu_A 24 QNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQIS-DLSP-LKDLTKLEELSVNRNRL 97 (263)
T ss_dssp HHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCSSCCEEECCSSCC
T ss_pred HHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccC-CChh-hccCCCCCEEECCCCcc
Confidence 578888888 555 5889999999999999998 566 7999999999999999999 4555 99999999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCccc
Q 044366 82 SGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVI 161 (918)
Q Consensus 82 ~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~ 161 (918)
++ +|. +.. ++|++|+|++|++++. + .+..+++|++|+|++|++++. + .++.+++|++|++++|++++. ..+
T Consensus 98 ~~-l~~-~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l 168 (263)
T 1xeu_A 98 KN-LNG-IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGL 168 (263)
T ss_dssp SC-CTT-CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTS
T ss_pred CC-cCc-ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHh
Confidence 85 444 333 9999999999999864 3 699999999999999999965 3 789999999999999999976 789
Q ss_pred ccccccCeeeccccccCCcC
Q 044366 162 GNLKSLLQLDLSENRLSGLI 181 (918)
Q Consensus 162 ~~l~~L~~L~Ls~N~l~~~~ 181 (918)
..+++|+.|++++|++....
T Consensus 169 ~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 169 TRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp TTCCCCCEEEEEEEEEECCC
T ss_pred ccCCCCCEEeCCCCcccCCc
Confidence 99999999999999998763
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.1e-18 Score=174.38 Aligned_cols=154 Identities=18% Similarity=0.245 Sum_probs=102.6
Q ss_pred ccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCC
Q 044366 41 IGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLS 120 (918)
Q Consensus 41 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 120 (918)
...+++|++|++++|+++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 355666666666666666 455 4666666666666666543 334666677777777777777665666677777777
Q ss_pred EEECcCCcCCCcCCcCCCCCCCCceeeccccc-cccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCc
Q 044366 121 TLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNS-LSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNN 199 (918)
Q Consensus 121 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 199 (918)
+|++++|++++..|..++++++|++|++++|. ++.+ + .+..+++|++|++++|+++++. .+..+++|++|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-M-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-G-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-H-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCc
Confidence 77777777776566667777777777777776 5533 3 5777777777777777777643 5677777777777777
Q ss_pred ccc
Q 044366 200 SLS 202 (918)
Q Consensus 200 ~l~ 202 (918)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 765
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=2e-18 Score=172.35 Aligned_cols=154 Identities=16% Similarity=0.204 Sum_probs=109.2
Q ss_pred cCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCc
Q 044366 65 IGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLD 144 (918)
Q Consensus 65 ~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~ 144 (918)
...+++|++|++++|.++ .+| .+..+++|++|++++|.+. .+..+..+++|++|++++|++++..+..++++++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356677777777777777 555 5777777777777777664 233677777777777777777766677777777777
Q ss_pred eeeccccccccCCCcccccccccCeeeccccc-cCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccc
Q 044366 145 TLFLYKNSLSGPIPSVIGNLKSLLQLDLSENR-LSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHIN 223 (918)
Q Consensus 145 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n 223 (918)
+|++++|++++..+..|+.+++|++|++++|+ ++.+ + .+..+++|++|++++|++++. + .+..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-M-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-G-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-H-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCc
Confidence 77777777776666777777777777777776 6554 3 577777777777777777753 2 5777777777777777
Q ss_pred ccc
Q 044366 224 QLN 226 (918)
Q Consensus 224 ~l~ 226 (918)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 765
No 372
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=4.1e-21 Score=222.76 Aligned_cols=187 Identities=22% Similarity=0.205 Sum_probs=94.4
Q ss_pred CCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCE
Q 044366 18 GNLSKLQYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLAL 97 (918)
Q Consensus 18 ~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~ 97 (918)
..+++|+.|+|++|+++ .+|.+|+.+++|+.|++++|.....+|. .+..+...+..|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhccc
Confidence 45666666667666665 5666666666666666655531101110 00111233455555555555555
Q ss_pred EE-ccCC-------------cccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCccccc
Q 044366 98 LY-LNDN-------------SLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGN 163 (918)
Q Consensus 98 L~-L~~n-------------~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~ 163 (918)
|+ ++.| .++...+ ..|+.|+|++|+|++ +|. ++++++|+.|+|++|+++ .+|..|+.
T Consensus 414 L~~l~~n~~~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 414 VDPMRAAYLDDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp HCGGGHHHHHHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred CcchhhcccchhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 55 4444 3332111 135555555555553 343 555555555555555555 33445555
Q ss_pred ccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCC-CccccCCCCcceeecccccccC
Q 044366 164 LKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSI-PPILGNLKSLSTLGLHINQLNG 227 (918)
Q Consensus 164 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~n~l~~ 227 (918)
+++|++|+|++|+|+++ | .+..+++|+.|+|++|+|++.. |..|..+++|+.|+|++|++++
T Consensus 485 l~~L~~L~Ls~N~l~~l-p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 485 LRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp CTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred CCCCCEEECCCCCCCCC-c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 55555555555555543 2 4555555555555555555443 4445555555555555555443
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=2.8e-18 Score=170.42 Aligned_cols=133 Identities=26% Similarity=0.311 Sum_probs=96.0
Q ss_pred CceecccccccCCCCCCCCCCCcccEEeccCccccccCcc-ccccccccceecccCcccCCCCchhhccccccceEeccC
Q 044366 408 NKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPM-SIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSH 486 (918)
Q Consensus 408 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 486 (918)
+.+++++|+++. +|..+. .+|++|+|++|.|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 345555555532 333222 2677777777777765553 477777888888888888777777788888888888888
Q ss_pred CcCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCCC
Q 044366 487 NILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPN 543 (918)
Q Consensus 487 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 543 (918)
|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|++++|+|+|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 888777777777788888888888888877777788888888888888888877664
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=4.7e-21 Score=222.21 Aligned_cols=203 Identities=22% Similarity=0.210 Sum_probs=149.8
Q ss_pred CCCCCCEEEcccccccccCCccccCCCCCCEEEccCCc-------------ccccCccccCCCCCCCEEE-CcCCcCCCc
Q 044366 67 QLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDNS-------------LFGSIPIVMGNLKSLSTLD-LSQNQLNGS 132 (918)
Q Consensus 67 ~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~-------------i~~~~~~~~~~l~~L~~L~-Ls~n~i~~~ 132 (918)
.+++|+.|++++|.++ .+|+.++++++|+.|++++|. +.+..|..+..+++|+.|+ ++.|.+
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~--- 422 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL--- 422 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH---
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc---
Confidence 3444444555555444 445555555555555554432 4456677777788888887 666544
Q ss_pred CCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCC
Q 044366 133 IPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNL 212 (918)
Q Consensus 133 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 212 (918)
.+|+.+.+.+|.++.+.+ ..|+.|+|++|+++++ |. |..+++|+.|+|++|.|+ .+|..|+.+
T Consensus 423 --------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 423 --------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp --------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred --------chhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 346666777777765432 2488999999999975 54 889999999999999998 678889999
Q ss_pred CCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCC-CccccccCCCCeEecCCCccCCcCCCc---CCCCCCCc
Q 044366 213 KSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFV-PKEIGYLKSLSKLEFCANHLSGVIPHS---VGNLTGLV 288 (918)
Q Consensus 213 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~---~~~l~~L~ 288 (918)
++|+.|+|++|+++++ | .++++++|+.|+|++|+|++.. |..+..+++|+.|++++|++.+.++.. +..+++|+
T Consensus 486 ~~L~~L~Ls~N~l~~l-p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~ 563 (567)
T 1dce_A 486 RCLEVLQASDNALENV-D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVS 563 (567)
T ss_dssp TTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCS
T ss_pred CCCCEEECCCCCCCCC-c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccC
Confidence 9999999999999874 4 7889999999999999999876 889999999999999999998776533 23478888
Q ss_pred EEEc
Q 044366 289 LLNM 292 (918)
Q Consensus 289 ~L~l 292 (918)
.|++
T Consensus 564 ~L~l 567 (567)
T 1dce_A 564 SILT 567 (567)
T ss_dssp EEEC
T ss_pred ccCC
Confidence 8864
No 375
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.73 E-value=6.3e-17 Score=179.33 Aligned_cols=265 Identities=12% Similarity=0.127 Sum_probs=158.6
Q ss_pred CCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeee
Q 044366 92 LSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLD 171 (918)
Q Consensus 92 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (918)
...++.+.+.++ ++.+...+|.+. +|+.+++..+ ++.+...+|.+. +|+.+.+.. .++.+...+|.++++|+.++
T Consensus 112 ~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 355555555543 444555566553 5666666554 554555556553 466666654 45555556666666666666
Q ss_pred ccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcC
Q 044366 172 LSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYG 251 (918)
Q Consensus 172 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 251 (918)
+++|+++.+...+|. +.+|+.+.+..+ ++.+...+|.++++|+.+.+..| ++.+....|.+ .+|+.+.+. +.++.
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~ 261 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTN 261 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccE
Confidence 666666655555555 456666666533 55455566666666666666653 44455555555 566666663 34555
Q ss_pred CCCccccccCCCCeEecCCCccC-----CcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccc
Q 044366 252 FVPKEIGYLKSLSKLEFCANHLS-----GVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVY 326 (918)
Q Consensus 252 ~~~~~~~~l~~L~~L~l~~n~l~-----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~ 326 (918)
+...+|.++++|+.+++.+|.+. .+.+.+|.++++|+.+.+.+ .+..+...+|.++++|+.+.+.. .+..+..
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~-~l~~I~~ 339 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPA-NVTQINF 339 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECT-TCCEECT
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECc-cccEEcH
Confidence 55666666666666666665544 45556666666666666663 35555566666667777776633 3666666
Q ss_pred cccCCCCCccEEeCCCCccccccCccccccc-ccceeecccccc
Q 044366 327 EAFGDHPNLTFLDLSQNNFYCEISFNWRNFS-KLGTFNASMNNI 369 (918)
Q Consensus 327 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~-~L~~l~l~~n~i 369 (918)
.+|... +|+.+++++|.+..+....|.+++ .+..+.+..+.+
T Consensus 340 ~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 340 SAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred HhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 667666 677777777666666666666663 556666655544
No 376
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=5.1e-18 Score=176.99 Aligned_cols=141 Identities=18% Similarity=0.197 Sum_probs=107.2
Q ss_pred CCCceeeccccceEEEEEEe-CCCCE--EEEEEcccccccCCC--------------------CChHHHHHHHHHHhhcc
Q 044366 648 FGEKYCIGKGGQRSVYKAEL-PSGNI--FAVKKFKAELFSDET--------------------ANPSEFLNEVLALTEIR 704 (918)
Q Consensus 648 ~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~~~--------------------~~~~~~~~e~~~l~~l~ 704 (918)
|.+.+.||+|+||.||+|.. .+|+. ||||+++........ .....+.+|+..++.++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999976 68999 999987543111000 00136889999999998
Q ss_pred CCce--eeEecccccCCceEEEEEeccC-C----ChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEEc
Q 044366 705 HRNI--IKFHGFCSNAQHSFIVCEYLAR-G----SLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLH-HDCIPPIVHR 776 (918)
Q Consensus 705 h~ni--v~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH~ 776 (918)
|+++ +.++++ +..++||||+.+ | +|.++... .++.++..++.|++.|++||| +. +|+||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givHr 195 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVHA 195 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEECS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 8764 334432 357899999953 4 66665432 224467889999999999999 88 99999
Q ss_pred CCCCCCeeeCCCCcEEEeccccccccC
Q 044366 777 DISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 777 dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
||||+|||+++ .++|+|||+|....
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEETT
T ss_pred CCCHHHEEEcC--cEEEEECcccccCC
Confidence 99999999998 99999999997653
No 377
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.73 E-value=9.2e-17 Score=177.99 Aligned_cols=267 Identities=10% Similarity=0.067 Sum_probs=215.1
Q ss_pred CCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCccCCCCCCCcEe
Q 044366 115 NLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVM 194 (918)
Q Consensus 115 ~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 194 (918)
.+..++.+.+.. .++.+...+|.+. +|+.+.+..+ ++.+...+|.+. +|+.+.+.. .++.+.+.+|.+|++|+.+
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred ecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCee
Confidence 346788888765 5665777788875 7899988776 777777888884 688888885 6777777889999999999
Q ss_pred eccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCccccccCCCCeEecCCCccC
Q 044366 195 SLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLS 274 (918)
Q Consensus 195 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 274 (918)
++++|.++.+...+|. ..+|+.+.+..+ ++.+....|.++++|+.+++.+| ++.+...+|.+ .+|+.+.+ .+.+.
T Consensus 186 ~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~ 260 (401)
T 4fdw_A 186 DLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVT 260 (401)
T ss_dssp ECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCC
T ss_pred ecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCcc
Confidence 9998888877777777 588999988844 77777788888989999999875 66677778877 78999988 55677
Q ss_pred CcCCCcCCCCCCCcEEEccCCcCc-----CCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCcccccc
Q 044366 275 GVIPHSVGNLTGLVLLNMCENHLF-----GPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEI 349 (918)
Q Consensus 275 ~~~~~~~~~l~~L~~L~l~~n~l~-----~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 349 (918)
.+...+|.++++|+.+.+.+|.+. .+.+.+|.++++|+.+.+. +.+..+...+|.++++|+.+++..| ++.+.
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 778888999999999998887765 4667888899999999988 5588888889998899999999655 77888
Q ss_pred CcccccccccceeeccccccccCCCcCcCCCC-CCcEEEccCceec
Q 044366 350 SFNWRNFSKLGTFNASMNNIYGSIPPEIGDSS-KLQVLDLSSNHIF 394 (918)
Q Consensus 350 ~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~-~L~~L~L~~N~l~ 394 (918)
..+|.++ +|+.+.+++|.+....+..|.+++ +++.|.+..+.+.
T Consensus 339 ~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 339 FSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred HHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 8888888 899999999888877777788874 7888888887764
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=8.6e-18 Score=166.85 Aligned_cols=129 Identities=30% Similarity=0.306 Sum_probs=72.3
Q ss_pred eeeccccccccCCCcCcCCCCCCcEEEccCceecccccc-chhhccccCceecccccccCCCCCCCCCCCcccEEeccCc
Q 044366 361 TFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPV-QLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSAN 439 (918)
Q Consensus 361 ~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 439 (918)
.+++++|++. .+|..+.. ++++|+|++|+|++..+. .|..+++|+.|+|++|++++..|..|..+++|++|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4445555553 34443332 566666666666654443 3555556666666666655555555555566666666666
Q ss_pred cccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCC
Q 044366 440 KLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEE 492 (918)
Q Consensus 440 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 492 (918)
+|++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|.+++.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 65555555555555555555555555555555555555555555555555543
No 379
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=2.7e-18 Score=205.58 Aligned_cols=218 Identities=22% Similarity=0.222 Sum_probs=86.6
Q ss_pred CCCCEEeCCCCcccccCCccccCCCCCCEEE-----cccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCC
Q 044366 21 SKLQYLDLGNNQLSGVIPPEIGKLNQLRRLY-----LDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNL 95 (918)
Q Consensus 21 ~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~-----L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L 95 (918)
+.++.|+|.+|.+. ..+..+.....|+.+. +..|++. ..|..+..+..|++|+|++|.+. .+|..+..+++|
T Consensus 173 ~~~~~l~L~~n~~~-~~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKD-EANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCC-cchhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 34556666666665 2343333333333332 2223333 44555666666666666666666 556555566666
Q ss_pred CEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeecccc
Q 044366 96 ALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSEN 175 (918)
Q Consensus 96 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 175 (918)
++|+|++|.|+ .+|..|.+|++|++|+|++|+|+ .+|..|++|++|++|+|++|.|+ .+|..|+.+++|++|+|++|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTS
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCC
Confidence 66666666665 55666666666666666666666 45666666666666666666665 33445666666666666666
Q ss_pred ccCCcCCccCCCCCC-CcEeeccCcccccCCCccccCCCCcceeecccc--------cccCCCCCCCcCCCcCCeEEccc
Q 044366 176 RLSGLIPLSLSNLSS-LTVMSLFNNSLSGSIPPILGNLKSLSTLGLHIN--------QLNGVIPPSIGNLSSLRNLSLFN 246 (918)
Q Consensus 176 ~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n--------~l~~~~~~~~~~l~~L~~L~Ls~ 246 (918)
.+++.+|..+..+.. +..|+|++|.+++.+|.. |+.|+++.| .+.+..+..+..+..++...+++
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~ 400 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSY 400 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------------------------------------------
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeec
Confidence 666665555543321 123566666666555542 334444444 33333344455566667777777
Q ss_pred CcCc
Q 044366 247 NRLY 250 (918)
Q Consensus 247 n~l~ 250 (918)
|-+.
T Consensus 401 Nil~ 404 (727)
T 4b8c_D 401 NTLC 404 (727)
T ss_dssp -CCC
T ss_pred cccc
Confidence 7665
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=2.8e-17 Score=163.05 Aligned_cols=132 Identities=26% Similarity=0.271 Sum_probs=111.7
Q ss_pred CceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCC
Q 044366 408 NKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHN 487 (918)
Q Consensus 408 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 487 (918)
+.+++++|+++.+ |..+ .++|++|+|++|.|+ .+|..|..+++|+.|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~~i-p~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKVL-PKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSSC-CSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCcC-CCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 3455666665533 3322 257899999999998 56788999999999999999999888889999999999999999
Q ss_pred cCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCCC
Q 044366 488 ILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPN 543 (918)
Q Consensus 488 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 543 (918)
+|++..|..|.++++|+.|+|++|+|+++.+..|..+++|+.|++++|+|.|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC
Confidence 99988888899999999999999999998888899999999999999999987653
No 381
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.71 E-value=2.4e-16 Score=175.78 Aligned_cols=136 Identities=8% Similarity=0.002 Sum_probs=63.6
Q ss_pred ccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCcccccccccCeeeccccccCCcCCcc
Q 044366 105 LFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSLLQLDLSENRLSGLIPLS 184 (918)
Q Consensus 105 i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 184 (918)
++.+...+|.++.+|+.+.+.. .++.+...+|.++++|+.+++..+ ++.+...+|.++++|+.+.+..+ +..+...+
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 3444555666666666666653 355455556666666666666543 44444555556666655555433 33333444
Q ss_pred CCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEccc
Q 044366 185 LSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFN 246 (918)
Q Consensus 185 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 246 (918)
|.++..+........ ..+...+|.++++|+.+.+..+. ..+....|.++.+|+.+++..
T Consensus 136 F~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~ 194 (394)
T 4fs7_A 136 FKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPR 194 (394)
T ss_dssp TTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCT
T ss_pred eecccccccccCccc--cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCC
Confidence 544433322222211 11223344444444444443332 223333444444444444433
No 382
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=3.3e-18 Score=204.78 Aligned_cols=141 Identities=29% Similarity=0.401 Sum_probs=65.7
Q ss_pred CcCcCCCCCCcEEEccCceeccccccchhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCcccccccc
Q 044366 374 PPEIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLL 453 (918)
Q Consensus 374 ~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 453 (918)
+..|..+++|+.|+|++|+|. .+|..+..+++|+.|+|++|+|+ .+|..|..+++|++|+|++|.|+ .+|..|+.++
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 293 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCF 293 (727)
T ss_dssp -----CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGT
T ss_pred hhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCC
Confidence 344444555555555555554 33333444555555555555554 34444455555555555555555 3344555555
Q ss_pred ccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCC-cceEecCCCcccccCc
Q 044366 454 KLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMES-LEKLNLSHNNLSDFIP 518 (918)
Q Consensus 454 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~ 518 (918)
+|++|+|++|.|+ .+|..|..+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|
T Consensus 294 ~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 294 QLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp TCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred CCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCc
Confidence 5555555555554 33444555555555555555555444444433221 1224455555544444
No 383
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.70 E-value=4.4e-16 Score=173.58 Aligned_cols=335 Identities=12% Similarity=0.041 Sum_probs=186.4
Q ss_pred cccccCCccccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCc
Q 044366 80 NVSGRIPSSLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPS 159 (918)
Q Consensus 80 ~~~~~~p~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 159 (918)
.++..-..+|.++++|+.+.+..+ ++.+...+|.++.+|+.+++..+ ++.+...+|.++.+|+.+.+..+ +..+...
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 455455667888888888888754 66667778888888888888754 55566677888888888777654 4446666
Q ss_pred ccccccccCeeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcC
Q 044366 160 VIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSL 239 (918)
Q Consensus 160 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 239 (918)
+|.++..++...... +..+...+|.++++|+.+.+.++.. .+...+|.++.+|+.+.+..+ ++.+....|.++..|
T Consensus 135 aF~~~~~~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L 210 (394)
T 4fs7_A 135 AFKGCDFKEITIPEG--VTVIGDEAFATCESLEYVSLPDSME-TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILL 210 (394)
T ss_dssp TTTTCCCSEEECCTT--CCEECTTTTTTCTTCCEEECCTTCC-EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTC
T ss_pred eeecccccccccCcc--ccccchhhhcccCCCcEEecCCccc-eeccccccCCCCceEEEcCCC-ceEeCchhhcccccc
Confidence 777765444333332 2334456788888888888876543 366677888888888888766 554556677777777
Q ss_pred CeEEcccCcCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecc
Q 044366 240 RNLSLFNNRLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQN 319 (918)
Q Consensus 240 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 319 (918)
+.+.+.++... + .+.+....+|+.+.+..+ +..+....|.++..++.+.+..+.. .+....|.++..++.+.+..+
T Consensus 211 ~~i~~~~~~~~-i-~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~ 286 (394)
T 4fs7_A 211 ENMEFPNSLYY-L-GDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSV 286 (394)
T ss_dssp CBCCCCTTCCE-E-CTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSS
T ss_pred ceeecCCCceE-e-ehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcc-eeeccccccccccceeccCce
Confidence 77776665432 1 122222345555555332 2223333444444444444433321 122333333333333333221
Q ss_pred cccCccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceecccccc
Q 044366 320 NLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPV 399 (918)
Q Consensus 320 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~ 399 (918)
. +... .|..+.+|+.+.+..+ ++.+...
T Consensus 287 ~---i~~~------------------------------------------------~F~~~~~L~~i~l~~~-i~~I~~~ 314 (394)
T 4fs7_A 287 I---VPEK------------------------------------------------TFYGCSSLTEVKLLDS-VKFIGEE 314 (394)
T ss_dssp E---ECTT------------------------------------------------TTTTCTTCCEEEECTT-CCEECTT
T ss_pred e---eccc------------------------------------------------cccccccccccccccc-cceechh
Confidence 1 1122 3334444444444433 3333444
Q ss_pred chhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhcccccc
Q 044366 400 QLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHL 479 (918)
Q Consensus 400 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 479 (918)
+|.++.+|+.++|..+ ++.+...+|.++++|+.+++..| ++.+...+|.++++|+.+++..+ ++ ....+|.++++|
T Consensus 315 aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L 390 (394)
T 4fs7_A 315 AFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKF 390 (394)
T ss_dssp TTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEE
T ss_pred hhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCC
Confidence 4555555555555422 44444555666666666666554 55455556666666666666544 22 223456666655
Q ss_pred ce
Q 044366 480 SE 481 (918)
Q Consensus 480 ~~ 481 (918)
+.
T Consensus 391 ~~ 392 (394)
T 4fs7_A 391 KW 392 (394)
T ss_dssp EE
T ss_pred cE
Confidence 54
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=1.1e-16 Score=156.84 Aligned_cols=133 Identities=26% Similarity=0.241 Sum_probs=101.2
Q ss_pred CceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCC
Q 044366 408 NKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHN 487 (918)
Q Consensus 408 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 487 (918)
+.+++++|+++... ..+ .++|++|++++|.+++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~~p-~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSVP-TGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSCC-TTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccCC-CCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 45555666655433 222 257788888888888766667778888888888888887777777788888888888888
Q ss_pred cCCCCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCCC
Q 044366 488 ILQEEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPN 543 (918)
Q Consensus 488 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 543 (918)
+|++..+..|..+++|+.|+|++|+++++.+..|..+++|+.|++++|+++|.+|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 88877777778888888888888888887777778888888888888888887763
No 385
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=7.4e-17 Score=156.54 Aligned_cols=130 Identities=26% Similarity=0.308 Sum_probs=69.8
Q ss_pred cCceeccccccc-CCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEecc
Q 044366 407 LNKLILSLNQLF-GGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLS 485 (918)
Q Consensus 407 L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 485 (918)
|+.|++++|+++ +.+|..+..+++|++|+|++|.|++. ..|..+++|++|+|++|++++.+|..+..+++|++|+|+
T Consensus 26 L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 103 (168)
T 2ell_A 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLS 103 (168)
T ss_dssp CSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECB
T ss_pred CCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEecc
Confidence 333333333333 23333444455555555555555543 445555555555555555554455555555666666666
Q ss_pred CCcCCCCCc-hhccccCCcceEecCCCcccccCc---ccccCCCCccEEEccCCcCC
Q 044366 486 HNILQEEIP-PQICKMESLEKLNLSHNNLSDFIP---RCFEEMRSLSWIDISYNELQ 538 (918)
Q Consensus 486 ~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~l~l~~N~l~ 538 (918)
+|+|++..+ ..+..+++|+.|+|++|++++..+ ..+..+++|+.||+++|.++
T Consensus 104 ~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 104 GNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp SSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred CCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 666654321 455566666666666666665444 35566666666666666554
No 386
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=9.7e-17 Score=155.70 Aligned_cols=135 Identities=23% Similarity=0.201 Sum_probs=120.2
Q ss_pred CCCCcEEEccCceec-cccccchhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCcccccccccccee
Q 044366 380 SSKLQVLDLSSNHIF-GKIPVQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYL 458 (918)
Q Consensus 380 ~~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 458 (918)
.++|+.|++++|.+. +.+|..+..+++|+.|+|++|++++. ..+..+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 368999999999997 67788889999999999999999876 788999999999999999998788888889999999
Q ss_pred cccCcccCCCCc-hhhccccccceEeccCCcCCCCCc---hhccccCCcceEecCCCccccc
Q 044366 459 NLSNNQFSHKIP-TEFEKLIHLSELDLSHNILQEEIP---PQICKMESLEKLNLSHNNLSDF 516 (918)
Q Consensus 459 ~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~ 516 (918)
+|++|+|++..+ ..|..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+...
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 999999986533 789999999999999999997655 5899999999999999998764
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=1.1e-16 Score=151.94 Aligned_cols=128 Identities=24% Similarity=0.301 Sum_probs=98.1
Q ss_pred cccCceeccccccc-CCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEe
Q 044366 405 FSLNKLILSLNQLF-GGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELD 483 (918)
Q Consensus 405 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 483 (918)
++|+.|++++|+++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|+|++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666667777666 45666677778888888888888765 6677888888888888888776777777788888888
Q ss_pred ccCCcCCCC-CchhccccCCcceEecCCCcccccCc---ccccCCCCccEEEccC
Q 044366 484 LSHNILQEE-IPPQICKMESLEKLNLSHNNLSDFIP---RCFEEMRSLSWIDISY 534 (918)
Q Consensus 484 Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~l~l~~ 534 (918)
+++|+|++. .+..+..+++|+.|++++|++++..+ ..+..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 888888763 34778888888888888888887665 5778888888888763
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=2e-16 Score=150.02 Aligned_cols=128 Identities=23% Similarity=0.170 Sum_probs=106.3
Q ss_pred CCCcEEEccCceec-cccccchhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceec
Q 044366 381 SKLQVLDLSSNHIF-GKIPVQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLN 459 (918)
Q Consensus 381 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 459 (918)
++|+.|++++|.+. +.+|..+..+++|+.|++++|++++. ..+..+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56777888888776 56677777788888888888888766 6788899999999999999977888888899999999
Q ss_pred ccCcccCCC-CchhhccccccceEeccCCcCCCCCc---hhccccCCcceEecCC
Q 044366 460 LSNNQFSHK-IPTEFEKLIHLSELDLSHNILQEEIP---PQICKMESLEKLNLSH 510 (918)
Q Consensus 460 Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~L~~ 510 (918)
+++|++++. .+..|..+++|++|++++|.+++..+ ..+..+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999864 34789999999999999999987665 5788899999999874
No 389
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=9.8e-16 Score=149.98 Aligned_cols=132 Identities=28% Similarity=0.265 Sum_probs=96.5
Q ss_pred cEEEccCceeccccccchhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCc
Q 044366 384 QVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNN 463 (918)
Q Consensus 384 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 463 (918)
+.+++++|+++.. |..+. ++|+.|++++|++++..+..|..+++|++|+|++|.|++..+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~~-p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSV-PTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSC-CTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccC-CCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 4556666666532 32222 46677777777777666667777888888888888888766666778888888888888
Q ss_pred ccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCCcccccCc
Q 044366 464 QFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHNNLSDFIP 518 (918)
Q Consensus 464 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 518 (918)
+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8887777777888888888888888886666667778888888888888876443
No 390
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63 E-value=3.6e-16 Score=168.37 Aligned_cols=149 Identities=10% Similarity=0.062 Sum_probs=104.9
Q ss_pred HHhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCC----------CCChHHHHHHHHHHhhccCCceeeEe
Q 044366 643 KATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDE----------TANPSEFLNEVLALTEIRHRNIIKFH 712 (918)
Q Consensus 643 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~~~~e~~~l~~l~h~niv~~~ 712 (918)
....-|++...||+|++|.||+|...+|+.||||+++....... .........+.++.....|+|+++++
T Consensus 92 ~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~ 171 (397)
T 4gyi_A 92 ARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY 171 (397)
T ss_dssp HTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH
Confidence 33344889999999999999999888999999998764322110 01122333444444444455555554
Q ss_pred ccccc------CCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeC
Q 044366 713 GFCSN------AQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLD 786 (918)
Q Consensus 713 ~~~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 786 (918)
..... ....++||||+++++|.++... +....++.|++.++.|||+. |||||||||.|||++
T Consensus 172 ~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 172 EEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIR 239 (397)
T ss_dssp HTTCSCCCEEEEETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred hcCCCCCeeeeccCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEe
Confidence 33211 1234799999999888665421 12456889999999999999 999999999999998
Q ss_pred CCC----------cEEEeccccccccC
Q 044366 787 SEY----------EAHVSDFGFAKFLE 803 (918)
Q Consensus 787 ~~~----------~~kl~DfG~~~~~~ 803 (918)
+++ .+.|+||+-+....
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCCcccccccccceEEEEeCCcccCC
Confidence 876 38999999876543
No 391
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=1.8e-15 Score=150.01 Aligned_cols=127 Identities=28% Similarity=0.354 Sum_probs=67.2
Q ss_pred CEEeCCCCcccccCCccccCCCCCCEEEcccccccccCCCCcCCCCCCCEEEcccccccccCCccccCCCCCCEEEccCC
Q 044366 24 QYLDLGNNQLSGVIPPEIGKLNQLRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNNVSGRIPSSLGNLSNLALLYLNDN 103 (918)
Q Consensus 24 ~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n 103 (918)
+++++++|+++ .+|..+. ++|++|+|++|+++ .+|..|..+++|++|++++|.+++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46667777666 5555443 45666666666665 45555555555555555555555444444555555555555555
Q ss_pred cccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccc
Q 044366 104 SLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLS 154 (918)
Q Consensus 104 ~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~ 154 (918)
+|++..|..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 555444444555555555555555555433334444444444444444443
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.59 E-value=7.6e-16 Score=150.53 Aligned_cols=106 Identities=21% Similarity=0.229 Sum_probs=65.9
Q ss_pred cccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCch--hccccCCcceEe
Q 044366 430 ELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPP--QICKMESLEKLN 507 (918)
Q Consensus 430 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~ 507 (918)
+|++|+|++|.|++. ..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+. +|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCc-chhhHhhhcCCCCCEEE
Confidence 566666666666643 456666666666666666665555555666666666666666653 343 566666677777
Q ss_pred cCCCcccccCcc---cccCCCCccEEEccCCcCC
Q 044366 508 LSHNNLSDFIPR---CFEEMRSLSWIDISYNELQ 538 (918)
Q Consensus 508 L~~N~l~~~~~~---~~~~l~~L~~l~l~~N~l~ 538 (918)
|++|+++...+. .+..+++|+.||+++|...
T Consensus 120 l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 777776653222 3666777777777776654
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.59 E-value=3e-17 Score=163.94 Aligned_cols=151 Identities=23% Similarity=0.254 Sum_probs=109.7
Q ss_pred CCcEEEccCceecccccc------chhhccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCcccccccccc
Q 044366 382 KLQVLDLSSNHIFGKIPV------QLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKL 455 (918)
Q Consensus 382 ~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 455 (918)
.++.++++.|.+.+..|. .+..+++|++|+|++|++++ +| .+..+++|++|+|++|.|+ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 344444444444444443 66777777777777777765 34 6777788888888888888 466677777888
Q ss_pred ceecccCcccCCCCchhhccccccceEeccCCcCCCCCc-hhccccCCcceEecCCCcccccCcc----------cccCC
Q 044366 456 HYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIP-PQICKMESLEKLNLSHNNLSDFIPR----------CFEEM 524 (918)
Q Consensus 456 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~----------~~~~l 524 (918)
++|+|++|+|++ +| .|..+++|+.|+|++|+|++..+ ..+..+++|+.|++++|++++..|. .+..+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l 173 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRL 173 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhC
Confidence 888888888875 34 68888888888888888875433 4688888888999999988776554 37788
Q ss_pred CCccEEEccCCcCCC
Q 044366 525 RSLSWIDISYNELQG 539 (918)
Q Consensus 525 ~~L~~l~l~~N~l~~ 539 (918)
++|+.|| +|+++.
T Consensus 174 ~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 174 PNLKKLD--GMPVDV 186 (198)
T ss_dssp SSCSEEC--CGGGTT
T ss_pred CCcEEEC--CcccCH
Confidence 8999886 777764
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.58 E-value=4.1e-15 Score=144.12 Aligned_cols=111 Identities=27% Similarity=0.361 Sum_probs=88.4
Q ss_pred cccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecC
Q 044366 430 ELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLS 509 (918)
Q Consensus 430 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 509 (918)
..+.|++++|.++. +|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|.++++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 35678888888874 555443 678888888888887778888888888888888888887777777888888888888
Q ss_pred CCcccccCcccccCCCCccEEEccCCcCCCCCCC
Q 044366 510 HNNLSDFIPRCFEEMRSLSWIDISYNELQGPIPN 543 (918)
Q Consensus 510 ~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 543 (918)
+|+|+++.+..|..+++|+.|+|++|+|+|.++.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 8888887777888888888888888888887764
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=2e-15 Score=147.58 Aligned_cols=134 Identities=19% Similarity=0.150 Sum_probs=112.6
Q ss_pred CcCCCCCCcEEEccCceeccccccchhhcc-ccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccc
Q 044366 376 EIGDSSKLQVLDLSSNHIFGKIPVQLVKLF-SLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLK 454 (918)
Q Consensus 376 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 454 (918)
.+..+.+|+.|++++|+++.. +. +..+. +|+.|+|++|++++. ..|..+++|++|+|++|.|++..+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 456678889999999988854 43 55555 899999999999876 67889999999999999999766666789999
Q ss_pred cceecccCcccCCCCch--hhccccccceEeccCCcCCCCCch----hccccCCcceEecCCCcccc
Q 044366 455 LHYLNLSNNQFSHKIPT--EFEKLIHLSELDLSHNILQEEIPP----QICKMESLEKLNLSHNNLSD 515 (918)
Q Consensus 455 L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~~ 515 (918)
|++|+|++|+|+. +|. .|..+++|+.|++++|.++. .|. .+..+++|+.|++++|.+..
T Consensus 90 L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 90 LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 9999999999964 555 78999999999999999985 555 48899999999999998865
No 396
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=1.1e-16 Score=159.92 Aligned_cols=156 Identities=24% Similarity=0.264 Sum_probs=129.5
Q ss_pred cccccccceeeccccccccCCCc------CcCCCCCCcEEEccCceeccccccchhhccccCceecccccccCCCCCCCC
Q 044366 353 WRNFSKLGTFNASMNNIYGSIPP------EIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGGVPLEFG 426 (918)
Q Consensus 353 ~~~~~~L~~l~l~~n~i~~~~~~------~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 426 (918)
|.....+..++++.+.+.+..|. .+..+++|++|+|++|+|++ +| .+..+++|+.|++++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44445566666666666666665 88899999999999999986 55 8999999999999999998 4566677
Q ss_pred CCCcccEEeccCccccccCccccccccccceecccCcccCCCCc-hhhccccccceEeccCCcCCCCCch----------
Q 044366 427 TLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIP-TEFEKLIHLSELDLSHNILQEEIPP---------- 495 (918)
Q Consensus 427 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~---------- 495 (918)
.+++|++|+|++|.+++ +| .+..+++|+.|+|++|+|++..+ ..+..+++|++|++++|.+++.+|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 78999999999999996 44 68899999999999999986443 5789999999999999999876554
Q ss_pred hccccCCcceEecCCCcccc
Q 044366 496 QICKMESLEKLNLSHNNLSD 515 (918)
Q Consensus 496 ~~~~l~~L~~L~L~~N~l~~ 515 (918)
.+..+++|+.|+ +|.++.
T Consensus 169 ~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHHCSSCSEEC--CGGGTT
T ss_pred HHHhCCCcEEEC--CcccCH
Confidence 378899999987 788765
No 397
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.55 E-value=1.3e-13 Score=153.52 Aligned_cols=108 Identities=9% Similarity=0.165 Sum_probs=44.9
Q ss_pred CCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccC
Q 044366 422 PLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKME 501 (918)
Q Consensus 422 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 501 (918)
..+|.++++|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.++.
T Consensus 281 ~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~ 357 (394)
T 4gt6_A 281 TGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCT 357 (394)
T ss_dssp TTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCT
T ss_pred CcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCC
Confidence 3344444444444443 2233333444444455555554433 33344445555555555555433 3334444555555
Q ss_pred CcceEecCCCcccccCcccccCCCCccEEEccCC
Q 044366 502 SLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYN 535 (918)
Q Consensus 502 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N 535 (918)
+|+.+++.+|... ..+|....+|+.+.+..|
T Consensus 358 ~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 358 ALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPG 388 (394)
T ss_dssp TCCEEEESSCHHH---HHTCBCCCCC--------
T ss_pred CCCEEEECCceee---hhhhhccCCCCEEEeCCC
Confidence 5555555544332 123344444555544443
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.55 E-value=1.3e-14 Score=141.07 Aligned_cols=108 Identities=25% Similarity=0.351 Sum_probs=81.1
Q ss_pred cEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecCCC
Q 044366 432 QYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLSHN 511 (918)
Q Consensus 432 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 511 (918)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57777777776 4455443 67777888888877777777777888888888888887666666777788888888888
Q ss_pred cccccCcccccCCCCccEEEccCCcCCCCCC
Q 044366 512 NLSDFIPRCFEEMRSLSWIDISYNELQGPIP 542 (918)
Q Consensus 512 ~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 542 (918)
+|+++.+..|..+++|+.|+|++|+|+|.++
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 8887766677788888888888888887655
No 399
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.53 E-value=3.4e-13 Score=150.11 Aligned_cols=336 Identities=9% Similarity=0.084 Sum_probs=160.2
Q ss_pred ccccCccccCCCC-CCCEEECcCCcCCCcCCcCCCCCCCCceeeccccc---cccCCCcccccccccCeeeccccccCCc
Q 044366 105 LFGSIPIVMGNLK-SLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNS---LSGPIPSVIGNLKSLLQLDLSENRLSGL 180 (918)
Q Consensus 105 i~~~~~~~~~~l~-~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~---l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 180 (918)
++.+...+|.+++ .|+.+.+-.+ ++.+...+|.++++|+.+.+..|. ++.+...+|.++.+|+.+.+..+ ++.+
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I 128 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEI 128 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-ccee
Confidence 3445556676664 4777777643 555666677777777777776653 55455566666666666666543 3434
Q ss_pred CCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccCcCcCCCCcccccc
Q 044366 181 IPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNNRLYGFVPKEIGYL 260 (918)
Q Consensus 181 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 260 (918)
...+|..+.+|+.+.+..+ +..+...+|.++.+|+.+.+..+ ++.+....|.+ .+|+.+.+..+-.. +....|..+
T Consensus 129 ~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c 204 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSEC 204 (394)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTC
T ss_pred hhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhc
Confidence 4556666666666666543 22244455556666666655443 33233334433 34555555443221 333344444
Q ss_pred CCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeC
Q 044366 261 KSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDL 340 (918)
Q Consensus 261 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 340 (918)
.+++......+........ .+. .+.........+.....+..+.+
T Consensus 205 ~~l~~~~~~~~~~~~~~~~------------------------~~~-----------~~~~~~~~~~~~~~~~~~~~~~i 249 (394)
T 4gt6_A 205 FALSTITSDSESYPAIDNV------------------------LYE-----------KSANGDYALIRYPSQREDPAFKI 249 (394)
T ss_dssp TTCCEEEECCSSSCBSSSC------------------------EEE-----------ECTTSCEEEEECCTTCCCSEEEC
T ss_pred cccceecccccccccccce------------------------eec-----------ccccccccccccccccccceEEc
Confidence 4444443333222211000 000 00000000001111111222221
Q ss_pred CCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchhhccccCceecccccccCC
Q 044366 341 SQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSLNKLILSLNQLFGG 420 (918)
Q Consensus 341 s~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 420 (918)
. +.++. .-..+|.++..|+.+.+..+... +....|.++.+|+.+.+. +.++.+
T Consensus 250 p-~~v~~------------------------i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I 302 (394)
T 4gt6_A 250 P-NGVAR------------------------IETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITEL 302 (394)
T ss_dssp C-TTEEE------------------------ECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEE
T ss_pred C-CcceE------------------------cccceeeecccccEEecccccce-ecCcccccccccccccCC-Cccccc
Confidence 1 11111 22223444444444444433222 344445555555555553 334445
Q ss_pred CCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhcccc
Q 044366 421 VPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKM 500 (918)
Q Consensus 421 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 500 (918)
...+|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.++.+|+.+++.+|... ...+...
T Consensus 303 ~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~ 377 (394)
T 4gt6_A 303 PESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTD 377 (394)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCC
T ss_pred CceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhcc
Confidence 5556666666777766644 55455566777777777777544 55566667777777777777766542 1345556
Q ss_pred CCcceEecCCCcc
Q 044366 501 ESLEKLNLSHNNL 513 (918)
Q Consensus 501 ~~L~~L~L~~N~l 513 (918)
.+|+.+.+..|.+
T Consensus 378 ~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 378 SGLQNLPVAPGSI 390 (394)
T ss_dssp CCC----------
T ss_pred CCCCEEEeCCCCE
Confidence 6677766665543
No 400
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=7.1e-14 Score=135.34 Aligned_cols=106 Identities=27% Similarity=0.268 Sum_probs=74.4
Q ss_pred CceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCC
Q 044366 408 NKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHN 487 (918)
Q Consensus 408 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 487 (918)
+.+++++|+++. +|..+ .++|++|+|++|.|+++.|..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 445555555543 23322 256777777777777766777777777777777777777776777777777777777777
Q ss_pred cCCCCCchhccccCCcceEecCCCccccc
Q 044366 488 ILQEEIPPQICKMESLEKLNLSHNNLSDF 516 (918)
Q Consensus 488 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 516 (918)
+|++..+..|..+++|+.|+|++|+++..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 77766666677777788888888877654
No 401
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=1.8e-13 Score=132.86 Aligned_cols=87 Identities=26% Similarity=0.331 Sum_probs=57.2
Q ss_pred CcccEEeccCccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEec
Q 044366 429 TELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNL 508 (918)
Q Consensus 429 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 508 (918)
++|++|+|++|.|++..|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 45666666666666665666666666666666666666655555666666677777777666555555666667777777
Q ss_pred CCCcccc
Q 044366 509 SHNNLSD 515 (918)
Q Consensus 509 ~~N~l~~ 515 (918)
++|++..
T Consensus 113 ~~N~~~c 119 (174)
T 2r9u_A 113 YNNPWDC 119 (174)
T ss_dssp CSSCBCT
T ss_pred CCCCccc
Confidence 7776664
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=1.2e-14 Score=159.46 Aligned_cols=141 Identities=21% Similarity=0.187 Sum_probs=73.6
Q ss_pred CCCcEEEccCceeccccccchh-hccccCceecccccccCCCCCCC-----CCCCcccEEeccCcccccc----Cccccc
Q 044366 381 SKLQVLDLSSNHIFGKIPVQLV-KLFSLNKLILSLNQLFGGVPLEF-----GTLTELQYLDLSANKLSSS----IPMSIG 450 (918)
Q Consensus 381 ~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~----~~~~~~ 450 (918)
++|++|+|++|.|.......+. .+.+|+.|+|++|+++......+ ...++|++|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 4666777777766533332222 34456666666665543222222 2345566666666666532 223334
Q ss_pred cccccceecccCcccCCCC----chhhccccccceEeccCCcCCCCC----chhccccCCcceEecCCCcccccCcccc
Q 044366 451 NLLKLHYLNLSNNQFSHKI----PTEFEKLIHLSELDLSHNILQEEI----PPQICKMESLEKLNLSHNNLSDFIPRCF 521 (918)
Q Consensus 451 ~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 521 (918)
.+++|++|+|++|+|++.. +..+...++|++|+|++|.|++.. +..+...++|+.|+|++|+|++.....+
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 5566666666666664322 334455556666666666665422 2233344566666666666655433333
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.34 E-value=7.8e-13 Score=144.68 Aligned_cols=90 Identities=23% Similarity=0.221 Sum_probs=50.9
Q ss_pred CCCCCcccEEeccC-ccccccCccccccccccceecccCcccCCCCchhhccccccceEeccCCcCCCCCchhccccCCc
Q 044366 425 FGTLTELQYLDLSA-NKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESL 503 (918)
Q Consensus 425 ~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 503 (918)
+..+++|++|+|++ |.|+++.+..|.++++|+.|+|++|+|+++.|..|.++++|+.|+|++|+|++..+..|..++ |
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L 105 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-L 105 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-C
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-c
Confidence 55555555666653 555555555555555666666666666555555555566666666666666544444444443 5
Q ss_pred ceEecCCCcccc
Q 044366 504 EKLNLSHNNLSD 515 (918)
Q Consensus 504 ~~L~L~~N~l~~ 515 (918)
+.|+|++|+|..
T Consensus 106 ~~l~l~~N~~~c 117 (347)
T 2ifg_A 106 QELVLSGNPLHC 117 (347)
T ss_dssp CEEECCSSCCCC
T ss_pred eEEEeeCCCccC
Confidence 555665555553
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.34 E-value=1.2e-12 Score=143.17 Aligned_cols=108 Identities=21% Similarity=0.214 Sum_probs=99.8
Q ss_pred cEEeccCc-cccccCccccccccccceecccC-cccCCCCchhhccccccceEeccCCcCCCCCchhccccCCcceEecC
Q 044366 432 QYLDLSAN-KLSSSIPMSIGNLLKLHYLNLSN-NQFSHKIPTEFEKLIHLSELDLSHNILQEEIPPQICKMESLEKLNLS 509 (918)
Q Consensus 432 ~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 509 (918)
..++++++ .|++ +|. +..+++|+.|+|++ |+|+++.+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45799998 8995 677 99999999999996 99999888999999999999999999999999999999999999999
Q ss_pred CCcccccCcccccCCCCccEEEccCCcCCCCCC
Q 044366 510 HNNLSDFIPRCFEEMRSLSWIDISYNELQGPIP 542 (918)
Q Consensus 510 ~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 542 (918)
+|+|+++.+..|..++ |+.|+|++|+|+|.++
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGG
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCc
Confidence 9999998888888877 9999999999998765
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=3.7e-14 Score=155.50 Aligned_cols=159 Identities=22% Similarity=0.252 Sum_probs=124.5
Q ss_pred CCCcEEEccCceeccccccchhhc-----cccCceecccccccCCCCCCC-CCCCcccEEeccCccccccCccccc----
Q 044366 381 SKLQVLDLSSNHIFGKIPVQLVKL-----FSLNKLILSLNQLFGGVPLEF-GTLTELQYLDLSANKLSSSIPMSIG---- 450 (918)
Q Consensus 381 ~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~---- 450 (918)
++|+.|+|++|.|+......+... .+|++|+|++|.++......+ ..+++|++|+|++|.|+......+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 578999999999986655555554 689999999999865333222 3467899999999999865444442
Q ss_pred -cccccceecccCcccCCC----CchhhccccccceEeccCCcCCCCC----chhccccCCcceEecCCCccccc----C
Q 044366 451 -NLLKLHYLNLSNNQFSHK----IPTEFEKLIHLSELDLSHNILQEEI----PPQICKMESLEKLNLSHNNLSDF----I 517 (918)
Q Consensus 451 -~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~----~ 517 (918)
..++|+.|+|++|+|+.. ++..+..+++|++|||++|.|++.. +..+...++|+.|+|++|.|++. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 457899999999999753 3445577899999999999997543 55677888999999999999864 3
Q ss_pred cccccCCCCccEEEccCCcCCC
Q 044366 518 PRCFEEMRSLSWIDISYNELQG 539 (918)
Q Consensus 518 ~~~~~~l~~L~~l~l~~N~l~~ 539 (918)
+.++...++|+.|||++|+++.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHhCCCCCEEeccCCCCCH
Confidence 4455667999999999999874
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.33 E-value=6.4e-11 Score=131.08 Aligned_cols=316 Identities=9% Similarity=0.016 Sum_probs=150.2
Q ss_pred cccCCCCCCEEEccCCcccccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCCccccccccc
Q 044366 88 SLGNLSNLALLYLNDNSLFGSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIPSVIGNLKSL 167 (918)
Q Consensus 88 ~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 167 (918)
++....+|+.+.+... ++.+...+|.++.+|+.++|..+ ++.+...+|.+. +|+.+.+-.+ ++.+...+|... +|
T Consensus 41 ~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DL 115 (379)
T ss_dssp TGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CC
T ss_pred ccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Cc
Confidence 4555566777777643 55566667777777777777543 554555666665 4555555432 443444455443 56
Q ss_pred CeeeccccccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccccccCCCCCCCcCCCcCCeEEcccC
Q 044366 168 LQLDLSENRLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHINQLNGVIPPSIGNLSSLRNLSLFNN 247 (918)
Q Consensus 168 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 247 (918)
+.+.+..+ ++.+...+|.++ +|+.+.+..+ ++.+...+|..+.+++.+.+..+.........+ . .+
T Consensus 116 ~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~-~----------~~ 181 (379)
T 4h09_A 116 DDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYV-L----------YN 181 (379)
T ss_dssp SEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTE-E----------EE
T ss_pred ccccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccce-e----------cc
Confidence 66665543 222333344443 3444433322 222333444445555444443332211100000 0 00
Q ss_pred cCcCCCCccccccCCCCeEecCCCccCCcCCCcCCCCCCCcEEEccCCcCcCCCCccccCCCCCCeEEeecccccCcccc
Q 044366 248 RLYGFVPKEIGYLKSLSKLEFCANHLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLRNLTSLERVRFNQNNLYGKVYE 327 (918)
Q Consensus 248 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~ 327 (918)
... .....+.....+..+.+.... .......+....+|+.+.+..+ +..+...+|.++..|+.+.+..+ ++.+...
T Consensus 182 ~~~-~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~ 257 (379)
T 4h09_A 182 KNK-TILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSF 257 (379)
T ss_dssp TTS-SEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTT
T ss_pred ccc-ceeccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCcc
Confidence 000 011122223333333333222 1133334444445555554332 22233444555555555555433 4444455
Q ss_pred ccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchhhcccc
Q 044366 328 AFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLVKLFSL 407 (918)
Q Consensus 328 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L 407 (918)
+|....+|+.+.+..+ +.. .-...|.++++|+.+.+.++.++.+....|.++.+|
T Consensus 258 aF~~~~~l~~i~l~~~-i~~------------------------i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L 312 (379)
T 4h09_A 258 LLQNCTALKTLNFYAK-VKT------------------------VPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKL 312 (379)
T ss_dssp TTTTCTTCCEEEECCC-CSE------------------------ECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTC
T ss_pred ccceeehhcccccccc-cee------------------------ccccccccccccccccccccccceehhhhhcCCCCC
Confidence 5555555555544322 332 333345555556666665555555555566666666
Q ss_pred CceecccccccCCCCCCCCCCCcccEEeccCccccccCcccccccc
Q 044366 408 NKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLL 453 (918)
Q Consensus 408 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 453 (918)
+.+.|..+ ++.+...+|.++++|+.+.+..+ ++.+...+|.+..
T Consensus 313 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 313 SSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred CEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 66666533 44555566677777777777544 5545555666543
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.31 E-value=8.1e-11 Score=130.26 Aligned_cols=152 Identities=12% Similarity=0.051 Sum_probs=115.7
Q ss_pred CccccccCCCCCccEEeCCCCccccccCcccccccccceeeccccccccCCCcCcCCCCCCcEEEccCceeccccccchh
Q 044366 323 GKVYEAFGDHPNLTFLDLSQNNFYCEISFNWRNFSKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIFGKIPVQLV 402 (918)
Q Consensus 323 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~ 402 (918)
.+...+|....+|+.+.+..+ +..+....|.+...|+.+.+..+ +..+-..+|.++.+|+.+.+..+ +..+....|.
T Consensus 207 ~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~ 283 (379)
T 4h09_A 207 TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCS 283 (379)
T ss_dssp EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTT
T ss_pred EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccc
Confidence 344445555556666665433 44555566666666666666554 44455667888889999998765 6667788899
Q ss_pred hccccCceecccccccCCCCCCCCCCCcccEEeccCccccccCccccccccccceecccCcccCCCCchhhcccccc
Q 044366 403 KLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQFSHKIPTEFEKLIHL 479 (918)
Q Consensus 403 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 479 (918)
++.+|+.+.+.++.++.+...+|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.+..-+
T Consensus 284 ~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~~~ 358 (379)
T 4h09_A 284 GCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSSIT 358 (379)
T ss_dssp TCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSSCC
T ss_pred cccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCCCC
Confidence 9999999999999998888999999999999999865 77677789999999999999766 777788899887433
No 408
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.17 E-value=6.8e-11 Score=123.57 Aligned_cols=146 Identities=12% Similarity=0.032 Sum_probs=113.8
Q ss_pred HHHhcCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc-CCceeeEecccccCCc
Q 044366 642 TKATGNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR-HRNIIKFHGFCSNAQH 720 (918)
Q Consensus 642 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~ 720 (918)
....+.|......+.|+.+.||++... |+.+++|+...... .....+.+|+++++.+. +..+.++++++.+.+.
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~----~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~ 84 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK----GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGW 84 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT----TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC----CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCc
Confidence 445567888888888999999999754 78999999765311 12345889999999884 6778899999888889
Q ss_pred eEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------
Q 044366 721 SFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDC------------------------------- 769 (918)
Q Consensus 721 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------- 769 (918)
.++||||++|.++.+.... ..+...++.+++++++.||+..
T Consensus 85 ~~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T 3tm0_A 85 SNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred eEEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence 9999999999998876421 1123478899999999999810
Q ss_pred -------------------------CCCeEEcCCCCCCeeeCCCCcEEEecccccc
Q 044366 770 -------------------------IPPIVHRDISSKNVLLDSEYEAHVSDFGFAK 800 (918)
Q Consensus 770 -------------------------~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~ 800 (918)
.+.++|+|+++.||+++++..+.|+||+.+.
T Consensus 157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876556799998775
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.01 E-value=5.2e-10 Score=116.75 Aligned_cols=137 Identities=12% Similarity=0.101 Sum_probs=100.3
Q ss_pred CCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCc--eeeEecccccCCceEEE
Q 044366 647 NFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRN--IIKFHGFCSNAQHSFIV 724 (918)
Q Consensus 647 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv 724 (918)
.+......+.|..+.||++...+|+.+++|..... ....+.+|+.+++.+.+.+ +.+++++...++..++|
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 34433333456669999998777888999986532 1245789999999886544 55688888877888999
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDC----------------------------------- 769 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------- 769 (918)
|||++|.++. ... .+ ...++.++++.++.||+..
T Consensus 94 ~e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 94 LGEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp EECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EEecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 9999998884 211 11 2356778888888888752
Q ss_pred --------------------CCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 770 --------------------IPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 770 --------------------~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
.+.++|+|++|.||+++++..+.|+|||.+..
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998776677999998764
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=1.7e-10 Score=125.04 Aligned_cols=83 Identities=13% Similarity=0.196 Sum_probs=43.6
Q ss_pred ccccCeeeccccccCCcCCccC---CCCCCCcEeeccCcccccCC----CccccCCCCcceeecccccccCCCCCCCcC-
Q 044366 164 LKSLLQLDLSENRLSGLIPLSL---SNLSSLTVMSLFNNSLSGSI----PPILGNLKSLSTLGLHINQLNGVIPPSIGN- 235 (918)
Q Consensus 164 l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~- 235 (918)
+++|++|+|++|.+.+..+..+ ..+++|++|+|+.|.+.+.. +..+..+++|+.|+|++|.++......+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 4566666666665543221111 13566777777766665422 222345567777777777665432222221
Q ss_pred CCcCCeEEcccCc
Q 044366 236 LSSLRNLSLFNNR 248 (918)
Q Consensus 236 l~~L~~L~Ls~n~ 248 (918)
+ ...+++++++
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 1 2457777766
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.92 E-value=3.3e-09 Score=116.27 Aligned_cols=144 Identities=14% Similarity=0.237 Sum_probs=107.4
Q ss_pred CceeeccccceEEEEEEeCCCCEEEEEEcc--cccccCCCCChHHHHHHHHHHhhcc--CCceeeEecccccC---CceE
Q 044366 650 EKYCIGKGGQRSVYKAELPSGNIFAVKKFK--AELFSDETANPSEFLNEVLALTEIR--HRNIIKFHGFCSNA---QHSF 722 (918)
Q Consensus 650 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~---~~~~ 722 (918)
..+.++.|.++.||++... +..+++|+.. .... ......+.+|+.+++.+. +..++++++++.+. +..+
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~---~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKL---LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCC---CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 4567999999999999875 4678888765 3211 112346788999999986 45678888888766 4589
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDC--------------------------------- 769 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--------------------------------- 769 (918)
+||||++|..+.+.. ...++..++..++.+++++|+.||+..
T Consensus 118 ~vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EEEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 999999998775422 123678888999999999999999831
Q ss_pred ----------------------CCCeEEcCCCCCCeeeCCCCc--EEEecccccccc
Q 044366 770 ----------------------IPPIVHRDISSKNVLLDSEYE--AHVSDFGFAKFL 802 (918)
Q Consensus 770 ----------------------~~~ivH~dlk~~Nill~~~~~--~kl~DfG~~~~~ 802 (918)
.+.++|||+++.||+++.++. +.|+||+.+...
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 247899999999999998753 689999988753
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.88 E-value=3.7e-10 Score=122.46 Aligned_cols=83 Identities=19% Similarity=0.189 Sum_probs=45.7
Q ss_pred cccCCCCCCEEEccCCccc---------ccCccccCCCCCCCEEECcCCcCCCcCCcCCCCCCCCceeeccccccccCCC
Q 044366 88 SLGNLSNLALLYLNDNSLF---------GSIPIVMGNLKSLSTLDLSQNQLNGSIPCSLDNLSNLDTLFLYKNSLSGPIP 158 (918)
Q Consensus 88 ~l~~l~~L~~L~L~~n~i~---------~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 158 (918)
++..+++|+.|.+..+... +.+...+..+++|+.|+|++|.-. .++. +. +++|++|+|..|.+.....
T Consensus 134 s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l 210 (362)
T 2ra8_A 134 NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVV 210 (362)
T ss_dssp THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHH
T ss_pred hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHH
Confidence 3445566666666543221 123344566677777777776311 1222 32 6677777777777653322
Q ss_pred cccc--cccccCeeecc
Q 044366 159 SVIG--NLKSLLQLDLS 173 (918)
Q Consensus 159 ~~~~--~l~~L~~L~Ls 173 (918)
..+. .+++|++|+|+
T Consensus 211 ~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 211 EDILGSDLPNLEKLVLY 227 (362)
T ss_dssp HHHHHSBCTTCCEEEEE
T ss_pred HHHHHccCCCCcEEEEe
Confidence 3333 56777777765
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.78 E-value=2.3e-09 Score=114.53 Aligned_cols=182 Identities=23% Similarity=0.246 Sum_probs=122.0
Q ss_pred ceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc-CCc--eeeEecccccCC---ceEEE
Q 044366 651 KYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR-HRN--IIKFHGFCSNAQ---HSFIV 724 (918)
Q Consensus 651 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv 724 (918)
.+.++.|....||++. +.+++|+.... .....+.+|.+.++.+. +.. +.++++....++ ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4568999999999863 56888875432 22467899999998883 322 445555544333 35899
Q ss_pred EEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 044366 725 CEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDC----------------------------------- 769 (918)
Q Consensus 725 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------- 769 (918)
|||++|.++.+.... .++..++..++.++++.++.||+..
T Consensus 95 m~~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 95 FTKIKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp EECCCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred EcccCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 999999888754322 2677788889999999999998621
Q ss_pred --------------------CCCeEEcCCCCCCeeeCC--CCcEEEeccccccccCCCCCCceeccccccc---cccccc
Q 044366 770 --------------------IPPIVHRDISSKNVLLDS--EYEAHVSDFGFAKFLEPHSSNWTEFAGTVGY---AAPELA 824 (918)
Q Consensus 770 --------------------~~~ivH~dlk~~Nill~~--~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y---~aPE~~ 824 (918)
.+.++|+|+++.||++++ ...+.++||+.+....+... . .....+ .+|+..
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~D-l---~~~~~~~~~~~~~~~ 245 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDND-F---ISLMEDDEEYGMEFV 245 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHH-H---HTTCCTTTSCCHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHH-H---HHHHhhccccCHHHH
Confidence 135799999999999998 45678999999876533210 0 000011 122211
Q ss_pred c----c-C---------CCCcccchhhHHHHHHHHHhCCCC
Q 044366 825 Y----T-M---------RATEKYDVYSFGVLALEVIKGYHP 851 (918)
Q Consensus 825 ~----~-~---------~~~~~~Dv~slG~vl~el~tg~~p 851 (918)
. . + +.....+.|++|.++|++.+|..+
T Consensus 246 ~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~ 286 (304)
T 3sg8_A 246 SKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMD 286 (304)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 1 0 0 011236899999999999999877
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.58 E-value=8.8e-09 Score=100.68 Aligned_cols=113 Identities=11% Similarity=0.161 Sum_probs=67.8
Q ss_pred CCCCcccEEeccCc-ccccc----CccccccccccceecccCcccCCCC----chhhccccccceEeccCCcCCCC----
Q 044366 426 GTLTELQYLDLSAN-KLSSS----IPMSIGNLLKLHYLNLSNNQFSHKI----PTEFEKLIHLSELDLSHNILQEE---- 492 (918)
Q Consensus 426 ~~l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~---- 492 (918)
...++|++|+|++| .|... +...+...++|++|+|++|+|.... ...+...+.|++|+|++|.|++.
T Consensus 33 ~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~ 112 (185)
T 1io0_A 33 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 112 (185)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHH
Confidence 34456666666666 66531 2334444566777777777765322 23344446677777777777643
Q ss_pred CchhccccCCcceEec--CCCccccc----CcccccCCCCccEEEccCCcCC
Q 044366 493 IPPQICKMESLEKLNL--SHNNLSDF----IPRCFEEMRSLSWIDISYNELQ 538 (918)
Q Consensus 493 ~~~~~~~l~~L~~L~L--~~N~l~~~----~~~~~~~l~~L~~l~l~~N~l~ 538 (918)
+...+...+.|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 113 l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 113 LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2444555667777777 66777653 2344555677788888777765
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.54 E-value=1.2e-08 Score=104.48 Aligned_cols=105 Identities=30% Similarity=0.351 Sum_probs=66.2
Q ss_pred CCCCCcccE--EeccCcccc---ccCccccccccccceecccCcccCCC--CchhhccccccceEeccCCcCCCCCchhc
Q 044366 425 FGTLTELQY--LDLSANKLS---SSIPMSIGNLLKLHYLNLSNNQFSHK--IPTEFEKLIHLSELDLSHNILQEEIPPQI 497 (918)
Q Consensus 425 ~~~l~~L~~--L~Ls~N~l~---~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 497 (918)
|...+.|.. ++++.|... ..++....++++|+.|+|++|+|+++ +|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444455655 667777443 11122224567788888888888763 346667788888888888888754 233
Q ss_pred cccC--CcceEecCCCcccccCc-------ccccCCCCccEEE
Q 044366 498 CKME--SLEKLNLSHNNLSDFIP-------RCFEEMRSLSWID 531 (918)
Q Consensus 498 ~~l~--~L~~L~L~~N~l~~~~~-------~~~~~l~~L~~l~ 531 (918)
..+. +|+.|+|++|++++..| ..+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 3333 77888888888776444 2356677777664
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.52 E-value=3.4e-07 Score=98.18 Aligned_cols=138 Identities=19% Similarity=0.190 Sum_probs=103.4
Q ss_pred CCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccC----CceeeEecccccCCceE
Q 044366 647 NFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRH----RNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 647 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~~~~~~~~ 722 (918)
.....+.++.|....||++ |+.+++|+.... .....+.+|.++++.+.+ ..+.+++++ +..+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~------~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~ 103 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD------SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF 103 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH------HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH------HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence 6677788999999999998 677888875332 113468899999888865 234455554 4678
Q ss_pred EEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCC--------------------------------
Q 044366 723 IVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCI-------------------------------- 770 (918)
Q Consensus 723 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-------------------------------- 770 (918)
+||||++|.++.+.... .++..+...++.++++.++.||+...
T Consensus 104 lvme~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 104 NIMKYIKGERITYEQYH-----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EEEECCCCBCCCHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeecCCccccccccc-----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 99999999888743321 25667778888888888888885422
Q ss_pred ----------------------------CCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 771 ----------------------------PPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 771 ----------------------------~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
+.++|+|++|.||+++++..+.++||+.+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999986667999999987544
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.43 E-value=1.8e-08 Score=98.53 Aligned_cols=120 Identities=14% Similarity=0.122 Sum_probs=75.5
Q ss_pred CcCCCCCCcEEEccCc-eeccccccchhhccccCceecccccccCCCCCCCCCCCcccEEeccCcccccc----Cccccc
Q 044366 376 EIGDSSKLQVLDLSSN-HIFGKIPVQLVKLFSLNKLILSLNQLFGGVPLEFGTLTELQYLDLSANKLSSS----IPMSIG 450 (918)
Q Consensus 376 ~~~~~~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~ 450 (918)
.+...++|++|+|++| .|.......+. ..+...++|++|+|++|.|... +...+.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~--------------------~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~ 90 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACA--------------------EALKTNTYVKKFSIVGTRSNDPVAFALAEMLK 90 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHH--------------------HHHTTCCSCCEEECTTSCCCHHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHH--------------------HHHHhCCCcCEEECcCCCCChHHHHHHHHHHH
Confidence 3455666777777776 66432221111 1233445677778887777642 233445
Q ss_pred cccccceecccCcccCCC----CchhhccccccceEec--cCCcCCCCC----chhccccCCcceEecCCCcccc
Q 044366 451 NLLKLHYLNLSNNQFSHK----IPTEFEKLIHLSELDL--SHNILQEEI----PPQICKMESLEKLNLSHNNLSD 515 (918)
Q Consensus 451 ~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L--s~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~ 515 (918)
..++|++|+|++|+|+.. +...+...+.|++|+| ++|.|+... ...+...++|+.|+|++|.+..
T Consensus 91 ~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 91 VNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp HCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHH
T ss_pred hCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCCh
Confidence 557788888888888643 3445666678888888 778886542 3344556788888888888753
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.36 E-value=1.1e-07 Score=97.29 Aligned_cols=94 Identities=23% Similarity=0.228 Sum_probs=72.5
Q ss_pred cccccccce--ecccCcccC---CCCchhhccccccceEeccCCcCCCC--CchhccccCCcceEecCCCcccccCcccc
Q 044366 449 IGNLLKLHY--LNLSNNQFS---HKIPTEFEKLIHLSELDLSHNILQEE--IPPQICKMESLEKLNLSHNNLSDFIPRCF 521 (918)
Q Consensus 449 ~~~l~~L~~--L~Ls~N~l~---~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 521 (918)
|...+.|.. ++++.|+.. ...+....++++|+.|+|++|+|++. +|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 555566776 788999643 22233346789999999999999984 457778999999999999999986 234
Q ss_pred cCCC--CccEEEccCCcCCCCCCCC
Q 044366 522 EEMR--SLSWIDISYNELQGPIPNS 544 (918)
Q Consensus 522 ~~l~--~L~~l~l~~N~l~~~~p~~ 544 (918)
..+. +|+.|+|++|++++.+|..
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~ 239 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQ 239 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSH
T ss_pred hhcccCCcceEEccCCcCccccCcc
Confidence 4444 9999999999999887753
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.32 E-value=2.6e-06 Score=89.35 Aligned_cols=78 Identities=19% Similarity=0.257 Sum_probs=61.3
Q ss_pred CCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCC---ceeeEecccccCCceEEEE
Q 044366 649 GEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHR---NIIKFHGFCSNAQHSFIVC 725 (918)
Q Consensus 649 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lv~ 725 (918)
...+.||.|.++.||+++..+|+.++||+.... .......|..|++.++.+++. .+++++++. ..++||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~----~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDD----APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTT----CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCC----CcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 445689999999999998888999999986431 122346789999999999765 577777763 469999
Q ss_pred EeccCCChh
Q 044366 726 EYLARGSLT 734 (918)
Q Consensus 726 e~~~~gsL~ 734 (918)
||++++++.
T Consensus 90 e~l~g~~~~ 98 (288)
T 3d1u_A 90 EWVDERPPT 98 (288)
T ss_dssp ECCCCCCCC
T ss_pred EecccCCCC
Confidence 999998753
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.26 E-value=1.8e-06 Score=90.10 Aligned_cols=135 Identities=15% Similarity=0.185 Sum_probs=98.0
Q ss_pred eeccccce-EEEEEEeC-CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc-CCceeeEecccccCCceEEEEEecc
Q 044366 653 CIGKGGQR-SVYKAELP-SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVCEYLA 729 (918)
Q Consensus 653 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 729 (918)
.+..|..| .||+.... +++.+.+|+-... ...++.+|...++.+. +--+.++++++.+++..++|||+++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~ 103 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIP 103 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH-------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC-------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeC
Confidence 45556655 68988654 5677899975432 2456888999998884 4447788899988899999999999
Q ss_pred CCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 044366 730 RGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDC---------------------------------------- 769 (918)
Q Consensus 730 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------- 769 (918)
+.++.+...... .+...++.++++.++.||+..
T Consensus 104 G~~~~~~~~~~~-------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 104 GKTAFQVLEEYP-------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp SEEHHHHHHHCG-------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred CccccccccCCH-------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 988877654321 223456667777777777521
Q ss_pred ---------------CCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 770 ---------------IPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 770 ---------------~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 01378999999999999877778999998864
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.23 E-value=4.3e-06 Score=88.80 Aligned_cols=138 Identities=15% Similarity=0.150 Sum_probs=95.5
Q ss_pred ceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCC---ceeeEecccc-cCCceEEEEE
Q 044366 651 KYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHR---NIIKFHGFCS-NAQHSFIVCE 726 (918)
Q Consensus 651 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e 726 (918)
.+.++.|....||+. |+.+++|+-... .....+.+|.++++.+.+. .+.+++.++. ..+..++|||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~------~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ------QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH------HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc------hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 456888999999997 567888874221 1246789999999999642 3556666663 4556789999
Q ss_pred eccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC--------------------------------------
Q 044366 727 YLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHD-------------------------------------- 768 (918)
Q Consensus 727 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-------------------------------------- 768 (918)
|++|.++.+.... .++..+...++.++++.|+.||+.
T Consensus 94 ~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 94 KVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred ccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9999888763211 134445555555555555555542
Q ss_pred -------------------CCCCeEEcCCCCCCeeeCC---CCc-EEEeccccccccC
Q 044366 769 -------------------CIPPIVHRDISSKNVLLDS---EYE-AHVSDFGFAKFLE 803 (918)
Q Consensus 769 -------------------~~~~ivH~dlk~~Nill~~---~~~-~kl~DfG~~~~~~ 803 (918)
..+.++|+|+++.||++++ ++. +.|+||+.+....
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd 226 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD 226 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence 2235799999999999998 455 4899999887543
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.13 E-value=8.4e-06 Score=88.65 Aligned_cols=147 Identities=13% Similarity=0.237 Sum_probs=91.8
Q ss_pred CCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCC--ceeeEecccccC-CceEE
Q 044366 647 NFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHR--NIIKFHGFCSNA-QHSFI 723 (918)
Q Consensus 647 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~-~~~~l 723 (918)
.....+.++.|....+|+.+. +|+.+++|.... ...+..|..+++.+... .+.++++++... +..++
T Consensus 42 ~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~---------~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~l 111 (362)
T 3ovc_A 42 SVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSC---------ADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYC 111 (362)
T ss_dssp CCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESC---------CHHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEE
T ss_pred CCceEEECCCCCcceEEEEEE-CCcEEEEEeCCc---------hhhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEE
Confidence 334456789999999999976 578899997532 13588999999888643 355677766554 56899
Q ss_pred EEEeccCCChhHH------------------hhcccccC--------------CCCHHHHH-------------------
Q 044366 724 VCEYLARGSLTTI------------------LRDDAAAK--------------EFSWNQRM------------------- 752 (918)
Q Consensus 724 v~e~~~~gsL~~~------------------l~~~~~~~--------------~l~~~~~~------------------- 752 (918)
||||++|.++.+. ++...... .-+|.+.+
T Consensus 112 v~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~ 191 (362)
T 3ovc_A 112 ISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTV 191 (362)
T ss_dssp EEECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTT
T ss_pred EEEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999998665421 01100000 00111110
Q ss_pred --HHHHHHHHHHHHHHhCC-CCCeEEcCCCCCCeeeCCCCcEEEeccccccccC
Q 044366 753 --NVIKGVANALSYLHHDC-IPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLE 803 (918)
Q Consensus 753 --~i~~~i~~~l~~LH~~~-~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~ 803 (918)
.....+....+++.... .+.++|+|+.+.||++++++.+.|+||+.+..-.
T Consensus 192 ~~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 192 SASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred cccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 11112222222332211 1468999999999999877778899999987644
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.01 E-value=1.2e-05 Score=87.74 Aligned_cols=84 Identities=5% Similarity=-0.030 Sum_probs=56.3
Q ss_pred ceee-ccccceEEEEEEeC-------CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc-C--CceeeEecccccC-
Q 044366 651 KYCI-GKGGQRSVYKAELP-------SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR-H--RNIIKFHGFCSNA- 718 (918)
Q Consensus 651 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~- 718 (918)
.+.| +.|....+|+.... +++.+++|........ .......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~-~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDV-PVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGC-CSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCcc-ccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 3567 88889999998654 2678889876442100 0001245778888888884 3 3567788877655
Q ss_pred --CceEEEEEeccCCChhH
Q 044366 719 --QHSFIVCEYLARGSLTT 735 (918)
Q Consensus 719 --~~~~lv~e~~~~gsL~~ 735 (918)
+..++||||++|.++.+
T Consensus 104 ~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TTSSCEEEEECCCCBCCCB
T ss_pred ccCCceEEEEecCCCChhh
Confidence 45789999999877653
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.95 E-value=1.7e-06 Score=82.02 Aligned_cols=82 Identities=11% Similarity=0.126 Sum_probs=40.0
Q ss_pred CCEEEcccccccccCCCCcCCCCCCCEEEccccc-ccccCCccccCC----CCCCEEEccCCc-ccccCccccCCCCCCC
Q 044366 47 LRRLYLDVNQLHGTIPPVIGQLSLINELVFCHNN-VSGRIPSSLGNL----SNLALLYLNDNS-LFGSIPIVMGNLKSLS 120 (918)
Q Consensus 47 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~-~~~~~p~~l~~l----~~L~~L~L~~n~-i~~~~~~~~~~l~~L~ 120 (918)
|+.||++++.|+..--..+..+++|++|+|++|. ++..--..++.+ ++|++|+|++|. |++..-..+..+++|+
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~ 142 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLK 142 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCC
Confidence 4444444444433323333444444444444442 332222233332 256666666663 5554444556667777
Q ss_pred EEECcCCc
Q 044366 121 TLDLSQNQ 128 (918)
Q Consensus 121 ~L~Ls~n~ 128 (918)
+|+|+++.
T Consensus 143 ~L~L~~c~ 150 (176)
T 3e4g_A 143 YLFLSDLP 150 (176)
T ss_dssp EEEEESCT
T ss_pred EEECCCCC
Confidence 77777664
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.89 E-value=3.8e-06 Score=79.54 Aligned_cols=84 Identities=13% Similarity=0.100 Sum_probs=53.4
Q ss_pred CcccEEeccCccccccCccccccccccceecccCcc-cCCCCchhhccc----cccceEeccCC-cCCCCCchhccccCC
Q 044366 429 TELQYLDLSANKLSSSIPMSIGNLLKLHYLNLSNNQ-FSHKIPTEFEKL----IHLSELDLSHN-ILQEEIPPQICKMES 502 (918)
Q Consensus 429 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N-~l~~~~~~~~~~l~~ 502 (918)
..|++|||+++.|+...-..+..+++|+.|+|++|. |++..-..+..+ ++|++|+|++| +||+.--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 357777777777765444556667777777777774 654433444443 35777777776 366554555666777
Q ss_pred cceEecCCCc
Q 044366 503 LEKLNLSHNN 512 (918)
Q Consensus 503 L~~L~L~~N~ 512 (918)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777764
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.88 E-value=5.1e-05 Score=83.91 Aligned_cols=79 Identities=14% Similarity=-0.005 Sum_probs=51.1
Q ss_pred ceeeccccceEEEEEEeC-CCCEEEEEEcccccc---cCCCCChHHHHHHHHHHhhccC--C-ceeeEecccccCCceEE
Q 044366 651 KYCIGKGGQRSVYKAELP-SGNIFAVKKFKAELF---SDETANPSEFLNEVLALTEIRH--R-NIIKFHGFCSNAQHSFI 723 (918)
Q Consensus 651 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~~~e~~~l~~l~h--~-niv~~~~~~~~~~~~~l 723 (918)
.+.+|.|..+.||++... +++.|+||....... .........+..|.++++.+.. + .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457999999999999654 578899998653211 1111234567889999888742 3 34455544 3445689
Q ss_pred EEEeccCC
Q 044366 724 VCEYLARG 731 (918)
Q Consensus 724 v~e~~~~g 731 (918)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.80 E-value=4.8e-05 Score=82.27 Aligned_cols=141 Identities=17% Similarity=0.224 Sum_probs=81.3
Q ss_pred eeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccC--CceeeEecc------cccCCceEE
Q 044366 652 YCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRH--RNIIKFHGF------CSNAQHSFI 723 (918)
Q Consensus 652 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~------~~~~~~~~l 723 (918)
+.|+.|..+.||++...+| .+++|+.... ...+..|..+++.+.. -.+.+++.. ...++..++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~--------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~ 108 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP--------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFV 108 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC--------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC--------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEE
Confidence 4566677899999987555 4889987541 2344456666665531 123444431 124566789
Q ss_pred EEEeccCCChh-----------H---Hhhcccc----c-------CCCCHHHH---------------------------
Q 044366 724 VCEYLARGSLT-----------T---ILRDDAA----A-------KEFSWNQR--------------------------- 751 (918)
Q Consensus 724 v~e~~~~gsL~-----------~---~l~~~~~----~-------~~l~~~~~--------------------------- 751 (918)
||||++|.++. + .++.... . ..-.|...
T Consensus 109 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (346)
T 2q83_A 109 VYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLY 188 (346)
T ss_dssp EEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred EEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHH
Confidence 99999986542 0 1111100 0 00123221
Q ss_pred ----HHHHHHHHHHHHHHHh----------CCCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 752 ----MNVIKGVANALSYLHH----------DCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 752 ----~~i~~~i~~~l~~LH~----------~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
..+...+..+++++++ ...+.++|+|+++.||+++.++.+.++||+.+..
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 189 LQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1112234456667763 1234899999999999998888999999998753
No 428
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.67 E-value=9.5e-06 Score=78.37 Aligned_cols=108 Identities=20% Similarity=0.255 Sum_probs=67.0
Q ss_pred CcccEEeccCc-cccc----cCccccccccccceecccCcccCCC----CchhhccccccceEeccCCcCCCC----Cch
Q 044366 429 TELQYLDLSAN-KLSS----SIPMSIGNLLKLHYLNLSNNQFSHK----IPTEFEKLIHLSELDLSHNILQEE----IPP 495 (918)
Q Consensus 429 ~~L~~L~Ls~N-~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~~~ 495 (918)
+.|++|+|++| .|.. .+.+.+...+.|+.|+|++|+|... +.+++..-+.|+.|+|++|+|++. +..
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 46777777764 6652 2334455566777777777777543 233444556788888888877643 223
Q ss_pred hccccCCcceEecCCC---cccc----cCcccccCCCCccEEEccCCc
Q 044366 496 QICKMESLEKLNLSHN---NLSD----FIPRCFEEMRSLSWIDISYNE 536 (918)
Q Consensus 496 ~~~~l~~L~~L~L~~N---~l~~----~~~~~~~~l~~L~~l~l~~N~ 536 (918)
++..-..|+.|+|++| .+.. .+..++..-++|+.|+++.|.
T Consensus 121 aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 4455567888888765 3332 134456667788888887664
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.65 E-value=0.00023 Score=75.08 Aligned_cols=140 Identities=17% Similarity=0.155 Sum_probs=92.9
Q ss_pred CCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc---CCceeeEecccccCCceEEEE
Q 044366 649 GEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR---HRNIIKFHGFCSNAQHSFIVC 725 (918)
Q Consensus 649 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~ 725 (918)
...+.|+.|....+|+... +++.+++|+.... ....|..|...++.+. ...++++++++...+..++||
T Consensus 39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvm 110 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINERS-------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLL 110 (312)
T ss_dssp CEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEE
T ss_pred eeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEE
Confidence 3446799999999999986 5678899986431 2567889999998884 366888888888778899999
Q ss_pred EeccCCChhH-----------Hhhcccc-c----------C--------CCCHHHHH---HHHH----------------
Q 044366 726 EYLARGSLTT-----------ILRDDAA-A----------K--------EFSWNQRM---NVIK---------------- 756 (918)
Q Consensus 726 e~~~~gsL~~-----------~l~~~~~-~----------~--------~l~~~~~~---~i~~---------------- 756 (918)
||+++..+.. .++.... . + .-+|.+.. ++..
T Consensus 111 e~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~ 190 (312)
T 3jr1_A 111 EALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNID 190 (312)
T ss_dssp ECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHH
T ss_pred EeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 9999876521 1122111 0 0 01454322 1111
Q ss_pred HHHHH-HHHHHh-CCCCCeEEcCCCCCCeeeCCCCcEEEeccc
Q 044366 757 GVANA-LSYLHH-DCIPPIVHRDISSKNVLLDSEYEAHVSDFG 797 (918)
Q Consensus 757 ~i~~~-l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 797 (918)
.+++. ...|.. ...|.++|+|+.+.|++++.++ +.+.|++
T Consensus 191 ~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 191 LIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11111 223432 2246899999999999999887 8899974
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.51 E-value=0.00012 Score=66.18 Aligned_cols=60 Identities=18% Similarity=0.230 Sum_probs=44.3
Q ss_pred eEeccCCcCC-CCCchhccccCCcceEecCCCcccccCcccccCCCCccEEEccCCcCCCCCC
Q 044366 481 ELDLSHNILQ-EEIPPQICKMESLEKLNLSHNNLSDFIPRCFEEMRSLSWIDISYNELQGPIP 542 (918)
Q Consensus 481 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 542 (918)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+.+.+..|..+++|+.|+|++|+|.|.+-
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~ 72 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCR 72 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCc
Confidence 6677777775 23454433 368888888888888888888888888888888888887654
No 431
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.48 E-value=0.00039 Score=72.91 Aligned_cols=80 Identities=18% Similarity=0.237 Sum_probs=58.1
Q ss_pred cCCCCceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc-C--CceeeEecccccCCceE
Q 044366 646 GNFGEKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR-H--RNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 646 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~~~~~ 722 (918)
........+|.|..+.||+.+..+|+.|.+|+.... .......|..|...++.+. . -.+++++++. ..+
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~----~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~ 86 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDD----APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRT 86 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTT----CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCC----CcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----Cce
Confidence 345666789999999999999999999999986432 2223456889999998884 2 2345555542 348
Q ss_pred EEEEeccCCCh
Q 044366 723 IVCEYLARGSL 733 (918)
Q Consensus 723 lv~e~~~~gsL 733 (918)
+||||++++..
T Consensus 87 lv~e~l~~~~~ 97 (288)
T 3f7w_A 87 LAMEWVDERPP 97 (288)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEeecccCC
Confidence 89999987643
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.47 E-value=0.00064 Score=75.59 Aligned_cols=76 Identities=14% Similarity=0.159 Sum_probs=48.7
Q ss_pred CCeEEcCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeccc--ccccccccccccC---CCCcccchhhHHHHHHHH
Q 044366 771 PPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEPHSSNWTEFAG--TVGYAAPELAYTM---RATEKYDVYSFGVLALEV 845 (918)
Q Consensus 771 ~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~g--~~~y~aPE~~~~~---~~~~~~Dv~slG~vl~el 845 (918)
+.++|||+++.||++++++ ++++||+.+....+... ...... ...|++|+..... +.....++...+..+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 4899999999999999876 99999998875432110 011111 1346666655321 122345566888888888
Q ss_pred HhC
Q 044366 846 IKG 848 (918)
Q Consensus 846 ~tg 848 (918)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.41 E-value=2.1e-05 Score=75.98 Aligned_cols=87 Identities=17% Similarity=0.219 Sum_probs=52.7
Q ss_pred CCCcccEEeccCcccccc----CccccccccccceecccCcccCCCC----chhhccccccceEeccCC---cCCCC---
Q 044366 427 TLTELQYLDLSANKLSSS----IPMSIGNLLKLHYLNLSNNQFSHKI----PTEFEKLIHLSELDLSHN---ILQEE--- 492 (918)
Q Consensus 427 ~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N---~l~~~--- 492 (918)
.-+.|+.|+|++|.|... +.+.+...+.|+.|+|++|+|+... .+++..-+.|++|+|++| .|...
T Consensus 68 ~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~ 147 (197)
T 1pgv_A 68 NSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEM 147 (197)
T ss_dssp TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHH
T ss_pred hCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHH
Confidence 345677777777777632 3344445667777777777775432 233444466788888765 33321
Q ss_pred -CchhccccCCcceEecCCCcc
Q 044366 493 -IPPQICKMESLEKLNLSHNNL 513 (918)
Q Consensus 493 -~~~~~~~l~~L~~L~L~~N~l 513 (918)
+...+..-+.|+.|+++.|.+
T Consensus 148 ~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 148 DMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHhCCCcCeEeccCCCc
Confidence 334455667788888877754
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.25 E-value=0.00029 Score=63.62 Aligned_cols=62 Identities=18% Similarity=0.278 Sum_probs=48.9
Q ss_pred EEEccCCcCc-CCCCccccCCCCCCeEEeecccccCccccccCCCCCccEEeCCCCccccccCcc
Q 044366 289 LLNMCENHLF-GPIPKSLRNLTSLERVRFNQNNLYGKVYEAFGDHPNLTFLDLSQNNFYCEISFN 352 (918)
Q Consensus 289 ~L~l~~n~l~-~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 352 (918)
.++.+++.++ ..+|..+. .+|++|+|++|+|+.++.+.|..+++|+.|+|++|+|.|+|...
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~ 74 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLV 74 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGH
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccH
Confidence 5666666665 23443322 35888999999999999999999999999999999999999854
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.05 E-value=0.0048 Score=65.86 Aligned_cols=144 Identities=13% Similarity=0.156 Sum_probs=83.9
Q ss_pred ceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCc--eeeEecc-----cccCCceEE
Q 044366 651 KYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRN--IIKFHGF-----CSNAQHSFI 723 (918)
Q Consensus 651 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~-----~~~~~~~~l 723 (918)
...++ |....||++...+|+.+++|..... ......+..|..+++.+.... +++++.. ...++..++
T Consensus 31 ~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~-----~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~ 104 (328)
T 1zyl_A 31 LTPLN-SYENRVYQFQDEDRRRFVVKFYRPE-----RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFA 104 (328)
T ss_dssp CEEEC-CSSSEEEEECCTTCCCEEEEEECTT-----TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEE
T ss_pred EEeec-CcccceEEEEcCCCCEEEEEEcCCC-----CCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEE
Confidence 34577 8888999988777888999987532 123466778888888774322 4445543 112345678
Q ss_pred EEEeccCCChh-----HH---------hhccc---c---cCCCCHHHH----HHH---------------HHHHHHHHHH
Q 044366 724 VCEYLARGSLT-----TI---------LRDDA---A---AKEFSWNQR----MNV---------------IKGVANALSY 764 (918)
Q Consensus 724 v~e~~~~gsL~-----~~---------l~~~~---~---~~~l~~~~~----~~i---------------~~~i~~~l~~ 764 (918)
||||++|.++. .+ ++... . ...+++... ..+ ...+.+.++.
T Consensus 105 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 184 (328)
T 1zyl_A 105 VFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAA 184 (328)
T ss_dssp EEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHH
Confidence 99999875432 11 11100 0 011222211 001 1111222333
Q ss_pred HHhC----CCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 765 LHHD----CIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 765 LH~~----~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
+.+. ..+.++|+|+++.||+++ + .+.++||+.+...
T Consensus 185 l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 185 VTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp HHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred HHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 3221 233678999999999999 4 8999999887643
No 436
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.05 E-value=0.0017 Score=69.67 Aligned_cols=143 Identities=17% Similarity=0.132 Sum_probs=73.9
Q ss_pred eeeccccceE-EEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccC--CceeeEecccccCCceEEEEEec
Q 044366 652 YCIGKGGQRS-VYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRH--RNIIKFHGFCSNAQHSFIVCEYL 728 (918)
Q Consensus 652 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~ 728 (918)
+.++.|+... +|+....+|+.+++|..... . ...+..|+.+++.+.. -.+.+++.+..+.+ ++|||++
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~----~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l 94 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPE----E---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDL 94 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTT----T---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCC----C---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeC
Confidence 3465555544 66776544777877764321 1 0223456666666632 23456666543333 7899999
Q ss_pred cCCChhHHhhcccc-----------------------cCCCCHHHHH-------H-------------HHHHHHHHHHHH
Q 044366 729 ARGSLTTILRDDAA-----------------------AKEFSWNQRM-------N-------------VIKGVANALSYL 765 (918)
Q Consensus 729 ~~gsL~~~l~~~~~-----------------------~~~l~~~~~~-------~-------------i~~~i~~~l~~L 765 (918)
.+.++.+++..... ...++..... . ....+.+.++.+
T Consensus 95 ~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 174 (333)
T 3csv_A 95 GDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQI 174 (333)
T ss_dssp CSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 77666554432100 0112211110 0 001112222333
Q ss_pred H---hCCCCCeEEcCCCCCCeeeCCC----CcEEEeccccccccC
Q 044366 766 H---HDCIPPIVHRDISSKNVLLDSE----YEAHVSDFGFAKFLE 803 (918)
Q Consensus 766 H---~~~~~~ivH~dlk~~Nill~~~----~~~kl~DfG~~~~~~ 803 (918)
. ....+.++|||+.+.||+++.+ +.+.++||+.+..-.
T Consensus 175 ~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 175 LSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp HHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred HHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 1 1123478999999999999875 679999999887543
No 437
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.04 E-value=0.0027 Score=67.60 Aligned_cols=159 Identities=11% Similarity=0.109 Sum_probs=90.2
Q ss_pred cCHHHHHHHhcCCCC-----ceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCc--e
Q 044366 636 VLYEEITKATGNFGE-----KYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRN--I 708 (918)
Q Consensus 636 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--i 708 (918)
++.+++......|.. .+.|+.|....+|+....+| .+++|..... .....+..|+.+++.+.... +
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~------~~~~~l~~e~~~l~~L~~~g~~v 79 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR------VEKNDLPFFLGLMQHLAAKGLSC 79 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---------CCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC------CCHHHHHHHHHHHHHHHHCCCCC
Confidence 445566666666764 23567788899999987665 5788987542 11345667888877774322 3
Q ss_pred eeEeccc------ccCCceEEEEEeccCCChhH----H----------hhcc----cccC--C---CCHHHHHH------
Q 044366 709 IKFHGFC------SNAQHSFIVCEYLARGSLTT----I----------LRDD----AAAK--E---FSWNQRMN------ 753 (918)
Q Consensus 709 v~~~~~~------~~~~~~~lv~e~~~~gsL~~----~----------l~~~----~~~~--~---l~~~~~~~------ 753 (918)
.+++... ...+..+++++|++|..+.. . ++.. .... . ..|...+.
T Consensus 80 P~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 159 (322)
T 2ppq_A 80 PLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERA 159 (322)
T ss_dssp CCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGG
T ss_pred CcccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHH
Confidence 3444321 12355789999999865421 0 1111 0000 0 11322111
Q ss_pred ------HHHHHHHHHHHHHhC----CCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 754 ------VIKGVANALSYLHHD----CIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 754 ------i~~~i~~~l~~LH~~----~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
+...+.+.++++++. ..++++|+|+.+.||+++++..+.++||+.+..
T Consensus 160 ~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 160 DEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011244555666532 134789999999999998876568999997763
No 438
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.99 E-value=0.0022 Score=67.59 Aligned_cols=140 Identities=16% Similarity=0.144 Sum_probs=75.9
Q ss_pred CceeeccccceEEEEEEeCCCCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCce-eeEecccccCCceEEEEEec
Q 044366 650 EKYCIGKGGQRSVYKAELPSGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNI-IKFHGFCSNAQHSFIVCEYL 728 (918)
Q Consensus 650 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~ 728 (918)
..+.|+.|....+|+. +.+++|+..... .. .....+|+..++.+....+ .+++++. .+.-++|+||+
T Consensus 22 ~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~--~~---~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i 89 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA-----GDLCLRIPGKGT--EE---YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYI 89 (301)
T ss_dssp SCEEEESCSSEEEEEE-----TTEEEEEECC---------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECC
T ss_pred ceeEcCCcccccccee-----eeEEEECCCCCc--cc---eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeec
Confidence 3678999999999998 567888765421 11 1123567777777642222 4555543 33457899999
Q ss_pred -cCCChhHH------------------hhcccc--cCCCC-HHHHHHHHHH--------------HHHHH----HHHHh-
Q 044366 729 -ARGSLTTI------------------LRDDAA--AKEFS-WNQRMNVIKG--------------VANAL----SYLHH- 767 (918)
Q Consensus 729 -~~gsL~~~------------------l~~~~~--~~~l~-~~~~~~i~~~--------------i~~~l----~~LH~- 767 (918)
++.++... ++.... ....+ +.....+... +.+.+ +.+..
T Consensus 90 ~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 169 (301)
T 3dxq_A 90 AGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAH 169 (301)
T ss_dssp TTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSS
T ss_pred CCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhc
Confidence 65444320 011100 00011 1111111111 11111 11111
Q ss_pred CCCCCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 768 DCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 768 ~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
...+.++|+|+.+.||+ ..++.+.++||..+..-
T Consensus 170 ~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 170 PLPLAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp CCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred CCCceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 12235899999999999 55667899999988753
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.74 E-value=0.0048 Score=66.76 Aligned_cols=141 Identities=18% Similarity=0.248 Sum_probs=84.7
Q ss_pred eeeccccceEEEEEEeC--------CCCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc-CCceeeEecccccCCceE
Q 044366 652 YCIGKGGQRSVYKAELP--------SGNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 652 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 722 (918)
+.+..|....+|++..+ +++.|.+|+... .......+.+|..+++.+. +.-..++++++.+ .
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-----~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g 126 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-----ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----G 126 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC--------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----E
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-----ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----c
Confidence 45777888899999765 357899998532 1223566779999988884 3333566766654 3
Q ss_pred EEEEeccCCChhHH-h----------------hccc--ccCCCC--HHHHHHHHHHHHH-------------------HH
Q 044366 723 IVCEYLARGSLTTI-L----------------RDDA--AAKEFS--WNQRMNVIKGVAN-------------------AL 762 (918)
Q Consensus 723 lv~e~~~~gsL~~~-l----------------~~~~--~~~~l~--~~~~~~i~~~i~~-------------------~l 762 (918)
+||||++|.++..- + +... -..... |.++.++..++.. .+
T Consensus 127 ~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~ 206 (379)
T 3feg_A 127 RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM 206 (379)
T ss_dssp EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHH
T ss_pred cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHH
Confidence 99999998655311 1 1110 011122 4555556554422 23
Q ss_pred HHH----HhC-CCCCeEEcCCCCCCeeeCCC----CcEEEeccccccc
Q 044366 763 SYL----HHD-CIPPIVHRDISSKNVLLDSE----YEAHVSDFGFAKF 801 (918)
Q Consensus 763 ~~L----H~~-~~~~ivH~dlk~~Nill~~~----~~~kl~DfG~~~~ 801 (918)
+++ ... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 207 ~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 207 GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 333 221 22368899999999999876 6899999998864
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.74 E-value=0.0037 Score=69.30 Aligned_cols=73 Identities=19% Similarity=0.242 Sum_probs=50.1
Q ss_pred ceeeccccceEEEEEEeCC--------CCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCce-eeEecccccCCce
Q 044366 651 KYCIGKGGQRSVYKAELPS--------GNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNI-IKFHGFCSNAQHS 721 (918)
Q Consensus 651 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~ 721 (918)
.+.|+.|....+|++..++ ++.|.+|+.... ...+.+..|..+++.+...++ +++++.+.+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~------~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~---- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP------ETESHLVAESVIFTLLSERHLGPKLYGIFSG---- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC------CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC------CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----
Confidence 3568888899999998653 578999986321 112566789999888853333 566665543
Q ss_pred EEEEEeccCCCh
Q 044366 722 FIVCEYLARGSL 733 (918)
Q Consensus 722 ~lv~e~~~~gsL 733 (918)
.+|+||++|.++
T Consensus 148 g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 GRLEEYIPSRPL 159 (429)
T ss_dssp EEEECCCCEEEC
T ss_pred CEEEEEeCCccc
Confidence 389999986444
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.57 E-value=0.0081 Score=58.08 Aligned_cols=103 Identities=19% Similarity=0.134 Sum_probs=67.7
Q ss_pred CChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCeeeCCCCcEEEeccccccccCCCCCCce
Q 044366 731 GSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKFLEPHSSNWT 810 (918)
Q Consensus 731 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~~~~~~~~~ 810 (918)
.+|.+.|... +.+++++++|.++.|.+.+|.-.-.... . ..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc----------
Confidence 3899999876 4679999999999999999887632111 1 1233456888999999988764 1110
Q ss_pred ecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCC
Q 044366 811 EFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHP 851 (918)
Q Consensus 811 ~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p 851 (918)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123566888764 3456788999999999999865555
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.53 E-value=0.0089 Score=66.53 Aligned_cols=74 Identities=16% Similarity=0.083 Sum_probs=47.0
Q ss_pred ceeeccccceEEEEEEeCC-CCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCce-eeEecccccCCceEEEEEec
Q 044366 651 KYCIGKGGQRSVYKAELPS-GNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRNI-IKFHGFCSNAQHSFIVCEYL 728 (918)
Q Consensus 651 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~ 728 (918)
.+.|+.|-...+|++...+ ++.+++|+.... ... ..+..+|..+++.+...++ .++++++.. ..||||+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~----~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I 183 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPK----TDE-IINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFM 183 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-----CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCC----hhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEee
Confidence 3568888899999998765 478888876432 111 1112578888888854433 567776632 3599999
Q ss_pred cCCCh
Q 044366 729 ARGSL 733 (918)
Q Consensus 729 ~~gsL 733 (918)
+|.++
T Consensus 184 ~G~~l 188 (458)
T 2qg7_A 184 DGYAL 188 (458)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 87544
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.21 E-value=0.0071 Score=65.75 Aligned_cols=73 Identities=12% Similarity=0.108 Sum_probs=43.0
Q ss_pred eeeccccceEEEEEEeCC---------CCEEEEEEcccccccCCCCChHHHHHHHHHHhhccCCc-eeeEecccccCCce
Q 044366 652 YCIGKGGQRSVYKAELPS---------GNIFAVKKFKAELFSDETANPSEFLNEVLALTEIRHRN-IIKFHGFCSNAQHS 721 (918)
Q Consensus 652 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~ 721 (918)
+.++.|....+|+....+ ++.+++|+..... .. ..+...|..+++.+.... +.++++... -
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~--~~---~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~ 109 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV--DE---LYNTISEFEVYKTMSKYKIAPQLLNTFN----G 109 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG--GG---TSCHHHHHHHHHHHHHTTSSCCEEEEET----T
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc--cc---eecHHHHHHHHHHHHhcCCCCceEEecC----C
Confidence 457888888999997654 2688888865421 11 112357888887774333 345665432 3
Q ss_pred EEEEEeccCCCh
Q 044366 722 FIVCEYLARGSL 733 (918)
Q Consensus 722 ~lv~e~~~~gsL 733 (918)
++||||++|.++
T Consensus 110 ~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 GRIEEWLYGDPL 121 (369)
T ss_dssp EEEEECCCSEEC
T ss_pred cEEEEEecCCcC
Confidence 789999987544
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.15 E-value=0.029 Score=59.96 Aligned_cols=32 Identities=25% Similarity=0.312 Sum_probs=28.2
Q ss_pred CCeEEcCCCCCCeeeCCCCcEEEecccccccc
Q 044366 771 PPIVHRDISSKNVLLDSEYEAHVSDFGFAKFL 802 (918)
Q Consensus 771 ~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~~ 802 (918)
..++|+|+.+.||++++++.+.++||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47899999999999998888999999887654
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.28 E-value=0.056 Score=58.62 Aligned_cols=146 Identities=18% Similarity=0.212 Sum_probs=83.2
Q ss_pred eeeccccceEEEEEEeCC--------CCEEEEEEccccccc-------CCCC-------ChHHHHHHHHHHhhcc-CCce
Q 044366 652 YCIGKGGQRSVYKAELPS--------GNIFAVKKFKAELFS-------DETA-------NPSEFLNEVLALTEIR-HRNI 708 (918)
Q Consensus 652 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-------~~~~-------~~~~~~~e~~~l~~l~-h~ni 708 (918)
+.|..|-...+|++..++ ++.|.+++.-..... .... ..+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 457678888999987754 367888876432100 0000 1123345888888884 4445
Q ss_pred eeEecccccCCceEEEEEeccCCChhH--Hh---------------hccc--ccCCCC--HHHHHHHHHHHH--------
Q 044366 709 IKFHGFCSNAQHSFIVCEYLARGSLTT--IL---------------RDDA--AAKEFS--WNQRMNVIKGVA-------- 759 (918)
Q Consensus 709 v~~~~~~~~~~~~~lv~e~~~~gsL~~--~l---------------~~~~--~~~~l~--~~~~~~i~~~i~-------- 759 (918)
.++++++.+ .+|+||+++.+|.. +- +... -..... +..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 567776643 28999999755532 10 1110 011122 334444443321
Q ss_pred --------------HHH----HHHHhC-CCCCeEEcCCCCCCeeeCCC------CcEEEeccccccc
Q 044366 760 --------------NAL----SYLHHD-CIPPIVHRDISSKNVLLDSE------YEAHVSDFGFAKF 801 (918)
Q Consensus 760 --------------~~l----~~LH~~-~~~~ivH~dlk~~Nill~~~------~~~kl~DfG~~~~ 801 (918)
.-+ +++... ....++|+|+.+.||+++++ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223322 22367899999999999887 7899999988763
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.74 E-value=0.11 Score=56.76 Aligned_cols=140 Identities=9% Similarity=0.064 Sum_probs=83.4
Q ss_pred eeeccccceEEEEEEeCC--------CCEEEEEEcccccccCCCCChHHHHHHHHHHhhcc-CCceeeEecccccCCceE
Q 044366 652 YCIGKGGQRSVYKAELPS--------GNIFAVKKFKAELFSDETANPSEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSF 722 (918)
Q Consensus 652 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 722 (918)
+.+..|....+|+....+ ++.|.+|+.... .....+..+|..+++.+. +.-..++++.+. -+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~-----t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~ 146 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKH-----VGKFYDSKVELDVFRYLSNINIAPNIIADFP----EG 146 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCC-----C-CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCC-----cchhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CC
Confidence 467778889999997753 578999986431 111223467888888774 332445555332 37
Q ss_pred EEEEeccCCChhH--H-----h----------hccc----------ccCCCCHHHHHHHHHHH-----------------
Q 044366 723 IVCEYLARGSLTT--I-----L----------RDDA----------AAKEFSWNQRMNVIKGV----------------- 758 (918)
Q Consensus 723 lv~e~~~~gsL~~--~-----l----------~~~~----------~~~~l~~~~~~~i~~~i----------------- 758 (918)
.||||++|.++.. + . +... ...+--|.++.++..++
T Consensus 147 ~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 226 (424)
T 3mes_A 147 RIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYS 226 (424)
T ss_dssp EEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHH
T ss_pred EEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHH
Confidence 8999999865421 0 0 1100 01111244444444332
Q ss_pred --HHHHHHHHhC---------------------CCCCeEEcCCCCCCeeeCCCCcEEEeccccccc
Q 044366 759 --ANALSYLHHD---------------------CIPPIVHRDISSKNVLLDSEYEAHVSDFGFAKF 801 (918)
Q Consensus 759 --~~~l~~LH~~---------------------~~~~ivH~dlk~~Nill~~~~~~kl~DfG~~~~ 801 (918)
...+++|.+. ....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 227 ~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 227 KILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2223333211 1236789999999999 7788999999998864
No 447
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=92.33 E-value=0.082 Score=36.16 Aligned_cols=28 Identities=29% Similarity=0.344 Sum_probs=11.8
Q ss_pred EehhHHHHHHHHHHHHHhhhhhhcccCC
Q 044366 585 IALPILGMVVLLIGLIGFFFLFRRRKRD 612 (918)
Q Consensus 585 i~~~~~~~~~~~~~~~~~~~~~~r~~~~ 612 (918)
|+..+++.+++++++++.+++++||++.
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 3444444333333444444444444443
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.95 E-value=0.11 Score=35.71 Aligned_cols=27 Identities=33% Similarity=0.421 Sum_probs=11.8
Q ss_pred EehhHHHHHHHHHHHHHhhhhhhcccC
Q 044366 585 IALPILGMVVLLIGLIGFFFLFRRRKR 611 (918)
Q Consensus 585 i~~~~~~~~~~~~~~~~~~~~~~r~~~ 611 (918)
|+..+++.+++++++++.+++++||++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 444444434443444444444444443
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.63 E-value=0.17 Score=55.26 Aligned_cols=29 Identities=24% Similarity=0.533 Sum_probs=24.6
Q ss_pred eEEcCCCCCCeee------CCCCcEEEeccccccc
Q 044366 773 IVHRDISSKNVLL------DSEYEAHVSDFGFAKF 801 (918)
Q Consensus 773 ivH~dlk~~Nill------~~~~~~kl~DfG~~~~ 801 (918)
++|+|+.+.||++ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4456799999998864
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=87.05 E-value=0.34 Score=33.06 Aligned_cols=6 Identities=17% Similarity=0.495 Sum_probs=2.4
Q ss_pred ehhHHH
Q 044366 586 ALPILG 591 (918)
Q Consensus 586 ~~~~~~ 591 (918)
+..+++
T Consensus 15 a~~vVG 20 (44)
T 2jwa_A 15 ISAVVG 20 (44)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333444
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=82.73 E-value=1.2 Score=43.05 Aligned_cols=116 Identities=10% Similarity=0.086 Sum_probs=77.6
Q ss_pred cCCceeeEecccccCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCe
Q 044366 704 RHRNIIKFHGFCSNAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALSYLHHDCIPPIVHRDISSKNV 783 (918)
Q Consensus 704 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 783 (918)
.||+.++. .+-.+++...+.|+.-+ +...|-. -...+...+++++.+|+....++++. +|--++|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~----ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN----IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG----GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH----HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceE
Confidence 57887765 34455565555555433 2222221 22368899999999999988777655 7889999999
Q ss_pred eeCCCCcEEEeccccccccCCCCCCceecccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCC
Q 044366 784 LLDSEYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDVYSFGVLALEVIKGYHPGD 853 (918)
Q Consensus 784 ll~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~p~~ 853 (918)
+++.++.+++.-.|+...+.|. ..+...=.-.+=+++..++++++.|+
T Consensus 111 ~f~~~~~p~i~~RGik~~l~P~----------------------~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVVDPL----------------------PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTBSCC----------------------CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCCCCC----------------------CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999888766544321 11111222346678888899888854
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=82.50 E-value=2 Score=41.69 Aligned_cols=114 Identities=11% Similarity=0.061 Sum_probs=75.3
Q ss_pred cCCceeeEecccccCCceEEEEEeccCCChhHHhhcccccCCCCHHHHHHHHHHHHHHHH-HHHhCCCCCeEEcCCCCCC
Q 044366 704 RHRNIIKFHGFCSNAQHSFIVCEYLARGSLTTILRDDAAAKEFSWNQRMNVIKGVANALS-YLHHDCIPPIVHRDISSKN 782 (918)
Q Consensus 704 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~-~LH~~~~~~ivH~dlk~~N 782 (918)
.||++ -..+-.+++...+.++.-+++.=...++ ..+..++++++.+|+.... ++++. +|--++|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCce
Confidence 57777 3333356666667676554432222332 2688899999999998777 66544 788999999
Q ss_pred eeeCCCCcEEEeccccccccCCCCCCceecccccccccccccccCCCCcccch-hhHHHHHHHHHhCCCCCC
Q 044366 783 VLLDSEYEAHVSDFGFAKFLEPHSSNWTEFAGTVGYAAPELAYTMRATEKYDV-YSFGVLALEVIKGYHPGD 853 (918)
Q Consensus 783 ill~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv-~slG~vl~el~tg~~p~~ 853 (918)
++++.++.+++.-.|+-..+.| .. .+ ..|. -.+=+++..++.+++.|+
T Consensus 115 L~f~~~~~p~i~hRGi~~~lpP-----------------~e-----~~-ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESLPP-----------------DE-----WD-DERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTTBSS-----------------CS-----CC-HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCcccCCC-----------------CC-----CC-HHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999988886654432 21 11 1222 235667777888877754
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=74.63 E-value=1.9 Score=28.63 Aligned_cols=22 Identities=27% Similarity=0.469 Sum_probs=9.0
Q ss_pred hHHHHHHHHHHHHHhhhhhhcc
Q 044366 588 PILGMVVLLIGLIGFFFLFRRR 609 (918)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~r~ 609 (918)
+++++++.+.+++++.++++||
T Consensus 16 iVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 16 VIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC
T ss_pred eehHHHHHHHHHHHHHHHHeec
Confidence 3444443333334444444444
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=65.81 E-value=13 Score=30.99 Aligned_cols=41 Identities=15% Similarity=0.099 Sum_probs=17.2
Q ss_pred CCCcccccccccCeeeccccccCCcCCccCCCCCCCcEeecc
Q 044366 156 PIPSVIGNLKSLLQLDLSENRLSGLIPLSLSNLSSLTVMSLF 197 (918)
Q Consensus 156 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 197 (918)
+...+|.++.+|+.+.+-.+ ++.+...+|.+|.+|+.+.+.
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 33344444444444444332 222333444444444444443
No 455
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=65.23 E-value=0.69 Score=51.36 Aligned_cols=60 Identities=7% Similarity=-0.018 Sum_probs=15.7
Q ss_pred ceeeccccceEEEEEEeCC-CCEEEE------EEcccccccCCCCChHHHHHHHHHHhhccCCceeeEeccc
Q 044366 651 KYCIGKGGQRSVYKAELPS-GNIFAV------KKFKAELFSDETANPSEFLNEVLALTEIRHRNIIKFHGFC 715 (918)
Q Consensus 651 ~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 715 (918)
.+.+| ||.||+|.+.. ..+||| |..+.... .......|.+|..+++..+|||+++.+++.
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~--~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGV--SEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-------------------------------------CBCCCEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccc--cccccccccccccccccccccccCCCcceE
Confidence 34565 99999997754 367888 66544221 122345788899999999999999987764
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=62.76 E-value=18 Score=30.03 Aligned_cols=47 Identities=11% Similarity=0.081 Sum_probs=27.4
Q ss_pred ccCCcCCccCCCCCCCcEeeccCcccccCCCccccCCCCcceeecccc
Q 044366 176 RLSGLIPLSLSNLSSLTVMSLFNNSLSGSIPPILGNLKSLSTLGLHIN 223 (918)
Q Consensus 176 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n 223 (918)
.++.+...+|.+|.+|+.+.+-.+ ++.+...+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 444555566666666666666554 33355556666666666666543
No 457
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=61.27 E-value=4.5 Score=27.32 Aligned_cols=7 Identities=43% Similarity=0.705 Sum_probs=2.7
Q ss_pred hhhhhcc
Q 044366 603 FFLFRRR 609 (918)
Q Consensus 603 ~~~~~r~ 609 (918)
+++++||
T Consensus 33 ~~~~~rR 39 (41)
T 2k9y_A 33 GFFIHRR 39 (41)
T ss_dssp HHSSSSS
T ss_pred heeEeee
Confidence 3334443
No 458
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=58.24 E-value=3.5 Score=26.59 Aligned_cols=23 Identities=22% Similarity=0.402 Sum_probs=8.8
Q ss_pred ehhHHHHHHHHHHHHHhhhhhhcc
Q 044366 586 ALPILGMVVLLIGLIGFFFLFRRR 609 (918)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~r~ 609 (918)
+..+++ +++++++.+.+.++.||
T Consensus 11 aagVvg-lll~vii~l~~~~~iRR 33 (35)
T 1iij_A 11 IATVVG-VLLFLILVVVVGILIKR 33 (35)
T ss_dssp HHHHHH-HHHHHHHTTTTTHHHHH
T ss_pred HHHHHH-HHHHHHHHHHhheEEee
Confidence 333444 33333333333334333
No 459
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=47.94 E-value=10 Score=26.00 Aligned_cols=31 Identities=19% Similarity=0.160 Sum_probs=19.3
Q ss_pred EEEEehhHHHHHHHHHHHHHhhhhhhcccCC
Q 044366 582 WVVIALPILGMVVLLIGLIGFFFLFRRRKRD 612 (918)
Q Consensus 582 ~~~i~~~~~~~~~~~~~~~~~~~~~~r~~~~ 612 (918)
.+..++..+.+++++++++.+++.+++++++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~k 43 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIVRK 43 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCCSC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhhcc
Confidence 3444455445555555667778888877775
No 460
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=40.60 E-value=25 Score=24.09 Aligned_cols=32 Identities=9% Similarity=-0.012 Sum_probs=19.3
Q ss_pred EEEEehhHHHHHHHHHHHHHhhhhhhcccCCc
Q 044366 582 WVVIALPILGMVVLLIGLIGFFFLFRRRKRDP 613 (918)
Q Consensus 582 ~~~i~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 613 (918)
.+..++..+.++++++.++.+++.++++++++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~~kr 43 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIKKKR 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 34444444445555556677778887777664
No 461
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=35.28 E-value=17 Score=27.30 Aligned_cols=22 Identities=14% Similarity=0.283 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHhhhhhhcccCC
Q 044366 591 GMVVLLIGLIGFFFLFRRRKRD 612 (918)
Q Consensus 591 ~~~~~~~~~~~~~~~~~r~~~~ 612 (918)
++..+-+.++++|+|.+-++-.
T Consensus 23 avaalg~li~gcwcylrlqri~ 44 (90)
T 1zza_A 23 AIAALGALILGCWCYLRLQRIS 44 (90)
T ss_dssp HHHHHHHHHHHHHTTTSSCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3333444445555555544433
No 462
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=29.89 E-value=39 Score=24.27 Aligned_cols=11 Identities=27% Similarity=0.591 Sum_probs=4.0
Q ss_pred EEEEehhHHHH
Q 044366 582 WVVIALPILGM 592 (918)
Q Consensus 582 ~~~i~~~~~~~ 592 (918)
|+++..+++++
T Consensus 13 wiIi~svl~GL 23 (54)
T 2knc_A 13 WWVLVGVLGGL 23 (54)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 463
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=29.61 E-value=28 Score=21.92 Aligned_cols=10 Identities=40% Similarity=0.674 Sum_probs=4.2
Q ss_pred HHhhhhhhcc
Q 044366 600 IGFFFLFRRR 609 (918)
Q Consensus 600 ~~~~~~~~r~ 609 (918)
.+.-|.+||.
T Consensus 23 lg~tflywrg 32 (40)
T 2l9u_A 23 LGGTFLYWRG 32 (40)
T ss_dssp HHHHHHHHHH
T ss_pred hCceeEEEcc
Confidence 3334444443
No 464
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=35.60 E-value=11 Score=24.65 Aligned_cols=9 Identities=11% Similarity=0.541 Sum_probs=3.7
Q ss_pred hhhhhhccc
Q 044366 602 FFFLFRRRK 610 (918)
Q Consensus 602 ~~~~~~r~~ 610 (918)
+.++.|++|
T Consensus 27 iLi~~w~qK 35 (39)
T 2l6w_A 27 ILIMLWQKK 35 (39)
Confidence 334444443
No 465
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=21.08 E-value=79 Score=23.50 Aligned_cols=26 Identities=35% Similarity=0.506 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHhhhhhhcccCCcc
Q 044366 589 ILGMVVLLIGLIGFFFLFRRRKRDPQ 614 (918)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~r~~~~~~ 614 (918)
++|.++.+++++++.++++-+.+.++
T Consensus 13 vlGg~~~lll~~glcI~ccvkcrhRr 38 (70)
T 2klu_A 13 VLGGVAGLLLFIGLGIFFSVRSRHRR 38 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCCS
T ss_pred HHhHHHHHHHHHHHHHHHhhHHHHHH
Confidence 44444444444444444444555433
Done!