Query 044367
Match_columns 450
No_of_seqs 287 out of 1738
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 03:58:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044367.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044367hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 2.4E-58 8.3E-63 462.6 30.8 341 86-448 10-410 (413)
2 3psg_A Pepsinogen; hydrolase(a 100.0 1.7E-56 5.7E-61 443.8 29.9 296 95-443 54-370 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 9.1E-57 3.1E-61 446.5 23.4 299 95-443 59-383 (383)
4 2apr_A Rhizopuspepsin; hydrola 100.0 1.3E-55 4.5E-60 430.7 27.5 302 86-443 5-324 (325)
5 3aup_A SBG7S, BG, basic 7S glo 100.0 5.2E-55 1.8E-59 438.7 30.3 335 87-449 12-399 (403)
6 1tzs_A Cathepsin E; hydrolase, 100.0 4.6E-55 1.6E-59 431.3 28.7 304 95-447 21-346 (351)
7 3fv3_A SAPP1P-secreted asparti 100.0 3.3E-55 1.1E-59 430.8 26.5 292 96-448 11-334 (339)
8 1j71_A Candidapepsin, aspartic 100.0 2.8E-55 9.5E-60 430.1 25.5 289 96-448 11-329 (334)
9 1dpj_A Proteinase A; proteinas 100.0 1.3E-54 4.4E-59 424.6 29.9 297 96-443 12-329 (329)
10 1mpp_A Pepsin; hydrolase(acid 100.0 7.2E-55 2.4E-59 431.9 27.3 302 95-449 16-361 (361)
11 3c9x_A Trichoderma reesei aspa 100.0 3.4E-55 1.2E-59 428.5 24.1 301 87-442 5-329 (329)
12 1oew_A Endothiapepsin; hydrola 100.0 3.6E-55 1.2E-59 428.3 24.1 301 87-442 5-329 (329)
13 3cms_A Chymosin B; hydrolase, 100.0 6.2E-55 2.1E-59 425.7 24.4 290 96-443 13-323 (323)
14 2qzx_A Candidapepsin-5; aspart 100.0 5E-55 1.7E-59 429.8 23.8 292 96-448 11-336 (342)
15 4aa9_A Chymosin; hydrolase, as 100.0 1.2E-54 4.1E-59 423.4 25.2 290 96-443 10-320 (320)
16 1htr_B Gastricsin; aspartyl pr 100.0 3.1E-54 1.1E-58 422.0 27.2 298 95-443 10-329 (329)
17 1am5_A Pepsin, acid proteinase 100.0 1.5E-54 5.2E-59 423.3 24.9 294 96-443 11-324 (324)
18 3pvk_A Candidapepsin-2; hydrol 100.0 1.1E-54 3.8E-59 427.6 23.6 293 96-448 11-336 (342)
19 1qdm_A Prophytepsin; aspartic 100.0 2.1E-53 7.1E-58 433.5 29.6 307 95-443 50-478 (478)
20 3k1w_A Renin; protease, altern 100.0 4.7E-54 1.6E-58 423.0 24.0 298 96-443 17-340 (341)
21 1miq_A Plasmepsin; aspartic pr 100.0 8.9E-54 3.1E-58 424.9 26.1 289 95-443 60-374 (375)
22 3lpj_A Beta-secretase 1; alzhe 100.0 1.4E-52 4.7E-57 427.4 30.2 315 97-449 74-426 (455)
23 1ibq_A Aspergillopepsin; aspar 100.0 5.4E-53 1.8E-57 412.2 25.9 298 87-443 5-325 (325)
24 1izd_A Aspartic proteinase; su 100.0 3E-53 1E-57 413.6 23.4 296 87-443 6-323 (323)
25 1t6e_X Xylanase inhibitor; two 100.0 3.6E-52 1.2E-56 415.0 30.2 321 88-443 6-373 (381)
26 3vf3_A Beta-secretase 1; struc 100.0 5.1E-52 1.7E-56 417.3 31.2 314 97-449 28-380 (402)
27 2bju_A Plasmepsin II; aspartic 100.0 3.4E-53 1.2E-57 427.5 22.2 288 96-443 137-450 (453)
28 2qp8_A Beta-secretase 1; BACE1 100.0 2.7E-52 9.1E-57 418.3 27.8 313 97-449 21-373 (395)
29 2ewy_A Beta-secretase 2; BACE2 100.0 4.1E-52 1.4E-56 415.4 28.8 312 97-448 13-360 (383)
30 1yg9_A Aspartic protease BLA G 100.0 1.4E-52 4.9E-57 410.0 24.0 289 96-443 16-329 (330)
31 3qvc_A Histo-aspartic protease 100.0 1.2E-52 4.2E-57 424.1 22.9 288 96-443 136-449 (451)
32 1bxo_A Protein (penicillopepsi 100.0 9.6E-53 3.3E-57 410.1 20.7 297 86-443 5-323 (323)
33 1wkr_A Polyporopepsin; hydrola 100.0 6.3E-51 2.2E-55 400.3 26.3 293 97-448 12-338 (340)
34 1b5f_A Protein (cardosin A); h 100.0 5.8E-40 2E-44 305.8 17.8 210 96-339 12-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 5E-35 1.7E-39 273.2 22.4 219 198-443 3-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.2E-22 4.1E-27 160.4 7.5 80 96-192 12-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 4.6E-17 1.6E-21 126.1 8.1 82 353-443 3-87 (87)
38 2i1a_A DNA damage-inducible pr 94.1 0.068 2.3E-06 44.5 5.6 29 97-127 25-53 (148)
39 3s8i_A Protein DDI1 homolog 1; 93.5 0.074 2.5E-06 44.4 4.6 27 416-442 109-135 (148)
40 2i1a_A DNA damage-inducible pr 92.3 0.33 1.1E-05 40.2 7.0 26 416-441 110-135 (148)
41 3s8i_A Protein DDI1 homolog 1; 89.3 0.37 1.3E-05 40.1 4.4 30 97-128 23-52 (148)
42 2hs1_A HIV-1 protease; ultra-h 84.1 1.3 4.3E-05 33.9 4.5 27 100-128 10-36 (99)
43 1fmb_A EIAV protease; hydrolas 83.8 1.1 3.8E-05 34.7 4.1 26 99-126 9-34 (104)
44 3liy_A Protease; hydrolase, hy 81.3 1.5 5.2E-05 34.2 3.9 31 100-130 12-45 (116)
45 3ec0_A Protease; HIV-2, inhibi 80.7 2 6.9E-05 32.8 4.5 27 100-128 10-36 (99)
46 2hah_A Protease, retropepsin; 73.6 3.1 0.00011 32.7 3.8 27 99-128 15-41 (116)
47 3sqf_A Protease; folded monome 67.9 5.6 0.00019 31.1 4.1 28 100-129 11-38 (114)
48 3slz_A GAG-Pro-POL polyprotein 58.0 12 0.00041 30.1 4.5 29 98-128 22-50 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 51.9 13 0.00043 32.3 3.9 28 99-128 9-36 (203)
50 2rsp_A RSV protease; hydrolase 49.6 16 0.00055 29.0 3.9 21 109-129 29-49 (124)
51 1lya_A Cathepsin D; lysosomal 45.9 19 0.00066 27.0 3.8 17 312-328 28-44 (97)
52 3ka2_A [L-Ala51;Gly51']HIV-1 p 30.7 43 0.0015 28.9 3.9 28 99-128 113-140 (203)
53 1b5f_A Protein (cardosin A); h 28.5 52 0.0018 29.0 4.3 32 97-128 188-227 (239)
54 1j71_A Candidapepsin, aspartic 26.8 63 0.0022 30.0 4.7 37 273-328 5-43 (334)
55 3fv3_A SAPP1P-secreted asparti 26.1 56 0.0019 30.3 4.3 39 273-328 5-43 (339)
56 3c9x_A Trichoderma reesei aspa 25.7 61 0.0021 30.1 4.4 32 97-128 193-230 (329)
57 1wkr_A Polyporopepsin; hydrola 25.1 62 0.0021 30.1 4.4 16 312-327 27-42 (340)
58 2qzx_A Candidapepsin-5; aspart 23.6 73 0.0025 29.6 4.6 17 312-328 27-43 (342)
59 3pvk_A Candidapepsin-2; hydrol 21.8 76 0.0026 29.4 4.3 17 312-328 27-43 (342)
60 1bxo_A Protein (penicillopepsi 21.5 72 0.0025 29.5 4.0 33 278-329 13-45 (323)
61 1lya_B Cathepsin D; lysosomal 20.9 83 0.0029 27.5 4.1 32 97-128 99-137 (241)
62 1izd_A Aspartic proteinase; su 20.6 77 0.0026 29.3 4.0 18 312-329 28-45 (323)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.4e-58 Score=462.59 Aligned_cols=341 Identities=18% Similarity=0.305 Sum_probs=269.2
Q ss_pred ccccccCCCCcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCCCCCcceeecCCCCCCC----CCC-
Q 044367 86 RAHLHPGISTVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQCGATTFDPSKSLTYATLPCDSSYCT----NDC- 160 (450)
Q Consensus 86 ~~~~~~~~~~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~C~~~~y~p~~SsT~~~~~c~~~~C~----~~c- 160 (450)
.+++..+... ++|+++|.||||||++.|+|||||+++||+|.+| .+|+||+.+.|.++.|. ..|
T Consensus 10 ~~pv~~d~~~-~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c----------~~Sst~~~v~C~s~~C~~~~~~~~~ 78 (413)
T 3vla_A 10 VVPVKKDAST-LQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN----------YVSSTYRPVRCRTSQCSLSGSIACG 78 (413)
T ss_dssp EEEEEECTTT-CCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS----------CCCTTCEECBTTSHHHHHTTCCEEE
T ss_pred EEEeeecCCC-CeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC----------CCCCCcCccCCCcccccccccCCCc
Confidence 4566666554 8999999999999999999999999999999876 47999999999999887 122
Q ss_pred --CC------CCCCceeEeee-CCCCccceeEEEEEEEeecCCCC----ceeeeeEEEEeEecC--CCCCCCCcceeeec
Q 044367 161 --GG------YPDECWYNIRY-TNGPDSQGTIGSEQFNFETSDEG----KTFLYDVGFGCSHNN--AHFSDEQFTGVFGL 225 (450)
Q Consensus 161 --~~------~~~~~~~~~~Y-g~gs~~~G~~~~D~v~~~~~~~~----~~~~~~~~fg~~~~~--~~~~~~~~~GIlGL 225 (450)
.. .++.|.|.+.| ++|+.+.|++++|+|+|+..++. .+.++++.|||++.+ .+.+ ..++|||||
T Consensus 79 ~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~-~~~dGIlGL 157 (413)
T 3vla_A 79 DCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLA-SGVVGMAGL 157 (413)
T ss_dssp CCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSC-TTCCEEEEC
T ss_pred ccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcc-ccccccccc
Confidence 11 13569999999 48777899999999999853322 368899999999986 3433 368999999
Q ss_pred CCCCCCCCcHHhhh------cCceEEeecCCCCCCcccceEEecCCCc---------Cc-ceecccccC-----------
Q 044367 226 GPATSSTHSLVEKV------GSKFSYCIGNLNYFEYAYNMLILGEGAI---------LE-GDSTPMSVI----------- 278 (450)
Q Consensus 226 g~~~~~~~sl~~ql------~~~Fs~~l~~~~~~~~~~G~l~fG~~~d---------~~-~~~~pl~~~----------- 278 (450)
|++ ..|+++|| +++|||||.+.. ...|+|+||+.+. .+ +.|+||...
T Consensus 158 g~~---~lSl~sql~~~~~i~~~FS~cL~~~~---~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~ 231 (413)
T 3vla_A 158 GRT---RIALPSQFASAFSFKRKFAMCLSGST---SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQG 231 (413)
T ss_dssp SSS---SSSHHHHHHHHHTCCSEEEEECCSCS---SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTT
T ss_pred CCC---CcchHHHHhhhcCCCceEEEeCCCCC---CCceEEEECCCcccccccccccCCceeEeecccCCcccccccccc
Confidence 999 99999997 379999999842 2348999996542 13 789999433
Q ss_pred --CCceEEEEeeEEECCEEeecCCcccccCCCcCCCceEEeccCceeecchHHHHHHHHHHHHHHhc-cCCCCCCCCCcc
Q 044367 279 --DGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQG-LLPSYPMDPAWH 355 (450)
Q Consensus 279 --~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ 355 (450)
..+|+|+|++|+||++.+.+++..|..+. .+.+.+||||||++++||+++|++|+++|.+.+.. .+++......+.
T Consensus 232 ~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~-~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~ 310 (413)
T 3vla_A 232 EPSVEYFIGVKSIKINSKIVALNTSLLSISS-AGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFG 310 (413)
T ss_dssp CCCCSCEECCCEEEETTEEECCCGGGTSBCT-TSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCS
T ss_pred CCCceEEEEEEEEEECCEEccCCchhccccc-CCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCc
Confidence 27999999999999999988776664321 01578999999999999999999999999998752 122222223468
Q ss_pred ccccCccCC---cccCCCeEEEEecC-CCEEEeCCCceEEEeCCCeEEEEEEeCCCCCCCCCCceeeehhhhcceEEEEE
Q 044367 356 LCYSGNINR---DLQGFPAMAFHFAG-GADLVLDAESVFYQESSSVFCLAVGPSDINGERFKDLSIIGMIAQQNYNVAYD 431 (450)
Q Consensus 356 ~C~~~~~~~---~~~~~P~i~f~f~g-g~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD 431 (450)
.|+...... ....+|+|+|+|+| +++|+|++++|+++..++..|++++...... ++.||||+.|||++|+|||
T Consensus 311 ~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~---~~~~IlGd~fl~~~~vvfD 387 (413)
T 3vla_A 311 ACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNL---RTSIVIGGHQLEDNLVQFD 387 (413)
T ss_dssp CEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSC---SSSEEECHHHHTTEEEEEE
T ss_pred ceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCc---ccceeEehhhhcCeEEEEE
Confidence 999754211 12479999999995 4899999999999877778999887654321 2469999999999999999
Q ss_pred CCCCEEEEEc------CCCCCcc
Q 044367 432 LVSKQLYFQR------IDCELLA 448 (450)
Q Consensus 432 ~~~~~iGfa~------~~c~~~~ 448 (450)
++++|||||+ ..|++++
T Consensus 388 ~~~~riGfa~~~~~~~~~c~~~~ 410 (413)
T 3vla_A 388 LATSRVGFSGTLLGSRTTCANFN 410 (413)
T ss_dssp TTTTEEEEEEEGGGGTCCGGGSB
T ss_pred CCCCEEEEEEecccCcccccCcC
Confidence 9999999998 4576653
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.7e-56 Score=443.76 Aligned_cols=296 Identities=20% Similarity=0.347 Sum_probs=239.8
Q ss_pred CcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCC--CCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEe
Q 044367 95 TVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQ--CGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNI 171 (450)
Q Consensus 95 ~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~--C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~ 171 (450)
.+.+|+++|.||||||++.|+|||||+++||+|..|.. |.. +.|||++|+|++. ..|.|.+
T Consensus 54 ~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~----------------~~~~~~i 117 (370)
T 3psg_A 54 LDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEA----------------TSQELSI 117 (370)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEE----------------EEEEEEE
T ss_pred cCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEE----------------CCcEEEE
Confidence 34899999999999999999999999999999999986 776 8999999999998 5789999
Q ss_pred eeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCC-CC-CCcceeeecCCCCCC---CCcHHhhh-------
Q 044367 172 RYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHF-SD-EQFTGVFGLGPATSS---THSLVEKV------- 239 (450)
Q Consensus 172 ~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~~-~~~~GIlGLg~~~~~---~~sl~~ql------- 239 (450)
.|++|+ ++|.+++|+|+|++ +.++++.|||++...+. |. ..++||||||+++.+ ..+++++|
T Consensus 118 ~Yg~Gs-~~G~~~~Dtv~ig~-----~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~ 191 (370)
T 3psg_A 118 TYGTGS-MTGILGYDTVQVGG-----ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVS 191 (370)
T ss_dssp ESSSCE-EEEEEEEEEEEETT-----EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSS
T ss_pred EeCCce-EEEEEEEEEEeeCC-----cccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHHHHHHCCCCC
Confidence 999999 69999999999998 89999999999988652 32 358999999998433 12344443
Q ss_pred cCceEEeecCCCCCCcccceEEecCCCcCc-----ceecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCCce
Q 044367 240 GSKFSYCIGNLNYFEYAYNMLILGEGAILE-----GDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAGV 314 (450)
Q Consensus 240 ~~~Fs~~l~~~~~~~~~~G~l~fG~~~d~~-----~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~~ 314 (450)
.++||+||.+.. ...|+|+||+ .|++ +.|+|+ ...++|+|.+++|+|+++.+.... ...+
T Consensus 192 ~~~FS~~L~~~~---~~~G~l~fGg-~D~~~y~g~l~~~pv-~~~~~w~v~l~~i~v~g~~~~~~~----------~~~a 256 (370)
T 3psg_A 192 QDLFSVYLSSND---DSGSVVLLGG-IDSSYYTGSLNWVPV-SVEGYWQITLDSITMDGETIACSG----------GCQA 256 (370)
T ss_dssp SSEEEEEEC--------CEEEEETC-CCGGGBSSCCEEEEC-SEETTEEEEECEEESSSSEEECTT----------CEEE
T ss_pred CCEEEEEEccCC---CCCeEEEEEe-eChHhcCCcceeecc-cccceeEEEEeEEEECCEEEecCC----------CceE
Confidence 579999999863 2348999995 5544 467777 456899999999999998775321 6789
Q ss_pred EEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEEEeC
Q 044367 315 FIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFYQES 394 (450)
Q Consensus 315 iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~ 394 (450)
||||||+++++|.+++++|.+++++... ..+.+.++|+. ...+|+|+|+|+ |.+++||+++|+++ .
T Consensus 257 iiDTGTs~~~lP~~~~~~i~~~i~a~~~------~~g~~~v~C~~------~~~lP~i~f~~~-g~~~~l~~~~yi~~-~ 322 (370)
T 3psg_A 257 IVDTGTSLLTGPTSAIANIQSDIGASEN------SDGEMVISCSS------IDSLPDIVFTID-GVQYPLSPSAYILQ-D 322 (370)
T ss_dssp EECTTCCSEEEEHHHHHHHHHHTTCEEC------TTCCEECCGGG------GGGCCCEEEEET-TEEEEECHHHHEEE-C
T ss_pred EEcCCCCcEECCHHHHHHHHHHhCCccc------CCCcEEEECCC------cccCCcEEEEEC-CEEEEECHHHhccc-C
Confidence 9999999999999999999999865421 22334689986 357999999998 99999999999998 3
Q ss_pred CCeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 395 SSVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 395 ~~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
+..|+. +....... ..++.||||++|||++|+|||++++|||||+++
T Consensus 323 -~~~C~~~~~~~~~~~-~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 323 -DDSCTSGFEGMDVPT-SSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp -SSCEEESEEEECCCT-TSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred -CCEEEEEEEeCCCCC-CCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 345986 55433211 112369999999999999999999999999974
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=9.1e-57 Score=446.51 Aligned_cols=299 Identities=20% Similarity=0.333 Sum_probs=241.3
Q ss_pred CcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCC----CCCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCcee
Q 044367 95 TVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCE----QCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWY 169 (450)
Q Consensus 95 ~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~----~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~ 169 (450)
.+.+|+++|.||||||+|.|+|||||+++||+|..|. .|.. +.|||++|+||+. .+|.|
T Consensus 59 ~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~----------------~~~~~ 122 (383)
T 2x0b_A 59 MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKH----------------NGTEL 122 (383)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEE----------------EEEEE
T ss_pred CCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEE----------------CCcEE
Confidence 3489999999999999999999999999999999997 4876 8999999999998 68899
Q ss_pred EeeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCC-C-CCCcceeeecCCCCCC---CCc----HHhh--
Q 044367 170 NIRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHF-S-DEQFTGVFGLGPATSS---THS----LVEK-- 238 (450)
Q Consensus 170 ~~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GIlGLg~~~~~---~~s----l~~q-- 238 (450)
.+.|++|+ ++|.+++|+|+|++ +.++ +.|||++...+. | ...++||||||++..+ ..+ +++|
T Consensus 123 ~i~Yg~Gs-~~G~~~~Dtv~ig~-----~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~ 195 (383)
T 2x0b_A 123 TLRYSTGT-VSGFLSQDIITVGG-----ITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGV 195 (383)
T ss_dssp EEECSSCE-EEEEEEEEEEEETT-----EEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTC
T ss_pred EEEcCCcc-EEEEEEeeEEEEcC-----ceEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcHHHHHHhCCC
Confidence 99999998 69999999999998 8899 999999987652 2 2358999999998433 122 3444
Q ss_pred h-cCceEEeecCCCCCC-cccceEEecCCCcCc-----ceecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCC
Q 044367 239 V-GSKFSYCIGNLNYFE-YAYNMLILGEGAILE-----GDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSD 311 (450)
Q Consensus 239 l-~~~Fs~~l~~~~~~~-~~~G~l~fG~~~d~~-----~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~ 311 (450)
+ .++||+||.+..... ...|+|+||+ .|++ +.|+|+ ...++|+|.+++|+|+++.+... . +
T Consensus 196 i~~~~FS~~L~~~~~~~~~~~G~l~fGg-~d~~~y~G~l~~~pv-~~~~~w~v~l~~i~v~~~~~~~~------~----~ 263 (383)
T 2x0b_A 196 LKEDVFSFYYNRDSENSQSLGGQIVLGG-SDPQHYEGNFHYINL-IKTGVWQIQMKGVSVGSSTLLCE------D----G 263 (383)
T ss_dssp CSSSEEEEEECCSCC----CCEEEEESS-CCGGGEEEEEEEEEB-SSTTSCEEEECEEEESSCCCBST------T----C
T ss_pred CCCCEEEEEEcCCCCcccCCCcEEEECC-cChHHcCCceEEEEc-CCCceEEEEEeEEEeCCceEEcC------C----C
Confidence 2 589999998864321 1248999995 5544 456777 56789999999999999764211 1 6
Q ss_pred CceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEE
Q 044367 312 AGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFY 391 (450)
Q Consensus 312 ~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~ 391 (450)
..+||||||+++++|.+++++|.+++++.. ..+.+.++|+. ...+|+|+|+|+ |.+++||+++|++
T Consensus 264 ~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-------~~g~~~v~C~~------~~~~P~i~f~~~-g~~~~l~~~~yi~ 329 (383)
T 2x0b_A 264 CLALVDTGASYISGSTSSIEKLMEALGAKK-------RLFDYVVKCNE------GPTLPDISFHLG-GKEYTLTSADYVF 329 (383)
T ss_dssp EEEEECTTCSSEEECHHHHHHHHHHHTCEE-------CSSCEEEEGGG------TTTCCCEEEEET-TEEEEECHHHHBC
T ss_pred cEEEEcCCCceEEcCHHHHHHHHHHhCCcc-------cCCcEEEeccc------cccCceEEEEEC-CEEEEECHHHhEe
Confidence 789999999999999999999999986542 22334689986 357999999998 8999999999998
Q ss_pred EeCC--CeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 392 QESS--SVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 392 ~~~~--~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
+... +..|+. +...... ...++.||||++|||++|+|||++++|||||+++
T Consensus 330 ~~~~~~~~~C~~~~~~~~~~-~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 330 QESYSSKKLCTLAIHAMDIP-PPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp CCCCCTTSEEEBSEEECCCC-TTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eccCCCCCeEEEEEEecccC-CCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 7653 458985 6554321 1112569999999999999999999999999874
No 4
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.3e-55 Score=430.71 Aligned_cols=302 Identities=20% Similarity=0.296 Sum_probs=244.2
Q ss_pred ccccccCCCCcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCCC-CC-CCCCCCCCCcceeecCCCCCCCCCCCCC
Q 044367 86 RAHLHPGISTVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQC-GA-TTFDPSKSLTYATLPCDSSYCTNDCGGY 163 (450)
Q Consensus 86 ~~~~~~~~~~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~C-~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~ 163 (450)
++++.+...+ .+|+++|.||||+|++.|+|||||+++||+|.+|..| .. +.|||++|+|++.
T Consensus 5 ~v~~~~~~~~-~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c~~~~~~y~~~~SsT~~~--------------- 68 (325)
T 2apr_A 5 TVPMTDYGND-IEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSGQTKYDPNQSSTYQA--------------- 68 (325)
T ss_dssp EEEEEEETTT-TEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSCCTTSCCBCGGGCTTCEE---------------
T ss_pred ceeeeecCCC-CEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchHhcCCCCCCcccCCCeee---------------
Confidence 4555555555 8999999999999999999999999999999999988 22 8999999999998
Q ss_pred CCCceeEeeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCCCC-CCcceeeecCCCCCC----CCcHHhh
Q 044367 164 PDECWYNIRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHFSD-EQFTGVFGLGPATSS----THSLVEK 238 (450)
Q Consensus 164 ~~~~~~~~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~GIlGLg~~~~~----~~sl~~q 238 (450)
..|.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||++...+.|. ...+||||||+...+ ..++++|
T Consensus 69 -~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~ 142 (325)
T 2apr_A 69 -DGRTWSISYGDGSSASGILAKDNVNLGG-----LLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDN 142 (325)
T ss_dssp -EEEEEEEECTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHH
T ss_pred -CCCEEEEEECCCCCEEEEEEEEEEEECC-----EEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHH
Confidence 5789999999999779999999999998 8999999999998765332 248999999998432 2345555
Q ss_pred h-------cCceEEeecCCCCCCcccceEEecCCCcC----cceecccccCCCceEEEEeeEEECCEEeecCCcccccCC
Q 044367 239 V-------GSKFSYCIGNLNYFEYAYNMLILGEGAIL----EGDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKND 307 (450)
Q Consensus 239 l-------~~~Fs~~l~~~~~~~~~~G~l~fG~~~d~----~~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~ 307 (450)
| .++||+||.+... ...|.|+||+.+.. ++.|+|+....++|.|.+++|+|+++ +...
T Consensus 143 l~~qg~i~~~~FS~~l~~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~~~~-------- 211 (325)
T 2apr_A 143 LISQGLISRPIFGVYLGKAKN--GGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-TVAS-------- 211 (325)
T ss_dssp HHHTTSCSSSEEEEEECCGGG--TCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-EEEC--------
T ss_pred HHhcCCCCCceEEEEecCCCC--CCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-ecCC--------
Confidence 4 5799999976432 23489999954422 35678875457899999999999993 3211
Q ss_pred CcCCCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCC
Q 044367 308 TWSDAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAE 387 (450)
Q Consensus 308 ~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~ 387 (450)
...+||||||++++||+++|+++++++.+.+.. . +.+.++|+. ..+|+|+|+|+ |.+++||++
T Consensus 212 ---~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~----~--g~~~~~C~~-------~~~p~i~f~f~-g~~~~ip~~ 274 (325)
T 2apr_A 212 ---SFDGILDTGTTLLILPNNIAASVARAYGASDNG----D--GTYTISCDT-------SAFKPLVFSIN-GASFQVSPD 274 (325)
T ss_dssp ---CEEEEECTTCSSEEEEHHHHHHHHHHHTCEECS----S--SCEEECSCG-------GGCCCEEEEET-TEEEEECGG
T ss_pred ---CceEEEecCCccEECCHHHHHHHHHHHhcccCC----C--CeEEEECCC-------CCCCcEEEEEC-CEEEEECHH
Confidence 568999999999999999999999999766432 1 334678974 45899999998 559999999
Q ss_pred ceEEEeCCCeEEEEEEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 388 SVFYQESSSVFCLAVGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 388 ~y~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
+|+++.. +..|++.+...+. +.||||++|||++|+|||++++|||||+++
T Consensus 275 ~~~~~~~-~~~C~~~i~~~~~-----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 275 SLVFEEF-QGQCIAGFGYGNW-----GFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp GGEEEEE-TTEEEESEEEESS-----SSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HEEEcCC-CCeEEEEEEcCCC-----CCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 9998755 5689874332221 359999999999999999999999999874
No 5
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=5.2e-55 Score=438.71 Aligned_cols=335 Identities=19% Similarity=0.355 Sum_probs=251.5
Q ss_pred cccccCCCCcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCCCCCcceeecCCCCCCC----CCC--
Q 044367 87 AHLHPGISTVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQCGATTFDPSKSLTYATLPCDSSYCT----NDC-- 160 (450)
Q Consensus 87 ~~~~~~~~~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~C~~~~y~p~~SsT~~~~~c~~~~C~----~~c-- 160 (450)
+++..+.. +++|+++|.||||||++.|+|||||+++||+|.+| .+|+|++.+.|.++.|. ..|
T Consensus 12 ~pl~~~~~-~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~----------~~Sst~~~~~C~s~~C~~~~~~~c~~ 80 (403)
T 3aup_A 12 LPVQNDGS-TGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ----------YSSKTYQAPFCHSTQCSRANTHQCLS 80 (403)
T ss_dssp EEEEECTT-TCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC----------CCCSSCBCCCTTBHHHHHTTCCCEEE
T ss_pred EeeecCCC-CceEEEEEECCCCCceeEEEEECCCCceeECCCCC----------CCCCCCCccCCCCccccCccccCccc
Confidence 44543333 38999999999999999999999999999998875 57999999999988786 112
Q ss_pred -CC------CCCCceeEeeeC-CCCccceeEEEEEEEeecCCCCc------eeeeeEEEEeEecCCCC-C-CCCcceeee
Q 044367 161 -GG------YPDECWYNIRYT-NGPDSQGTIGSEQFNFETSDEGK------TFLYDVGFGCSHNNAHF-S-DEQFTGVFG 224 (450)
Q Consensus 161 -~~------~~~~~~~~~~Yg-~gs~~~G~~~~D~v~~~~~~~~~------~~~~~~~fg~~~~~~~~-~-~~~~~GIlG 224 (450)
.. .+..|.|.+.|+ +|+.+.|.+++|+|+|++.++.. +.++++.|||++..... + ....+||||
T Consensus 81 c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlG 160 (403)
T 3aup_A 81 CPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAG 160 (403)
T ss_dssp CSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEE
T ss_pred cCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEE
Confidence 11 125799999998 77778999999999998744322 68899999999986422 2 235899999
Q ss_pred cCCCCCCCCcHHhhh------cCceEEeecCCCCCCcccceEEecCCCc-----C-------cceecccccC-CCceEEE
Q 044367 225 LGPATSSTHSLVEKV------GSKFSYCIGNLNYFEYAYNMLILGEGAI-----L-------EGDSTPMSVI-DGSYYVT 285 (450)
Q Consensus 225 Lg~~~~~~~sl~~ql------~~~Fs~~l~~~~~~~~~~G~l~fG~~~d-----~-------~~~~~pl~~~-~~~~~v~ 285 (450)
||++ ..+++.|| .++||+||.+.. ...|.|+||+ +. . ++.|+||... .++|+|.
T Consensus 161 Lg~~---~~s~~~ql~~~~~~~~~FS~~L~~~~---~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~ 233 (403)
T 3aup_A 161 LGHA---PISLPNQLASHFGLQRQFTTCLSRYP---TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVR 233 (403)
T ss_dssp CSSS---TTSHHHHHHHHHTCCSEEEEECCSCT---TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEEC
T ss_pred CCCC---CcCHHHHHHhhcCCCCeEEEEcCCCC---CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEE
Confidence 9999 88888887 479999998753 2348999996 32 1 5678998433 4799999
Q ss_pred EeeEEECCEEe-ecCCcccc--cCCCcCCCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCcc
Q 044367 286 LEGISLGEKML-DIDPNLFK--KNDTWSDAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNI 362 (450)
Q Consensus 286 l~~i~vg~~~~-~~~~~~~~--~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 362 (450)
|++|+|+++.+ .++...+. ..+ ...+||||||++++||+++|++|+++|.+.+.. ++.......+..|+....
T Consensus 234 l~~i~v~g~~~~~~~~~~~~~~~~g---~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~-~~~~~~~~~~~~c~~c~~ 309 (403)
T 3aup_A 234 VNSIRINQHSVFPLNKISSTIVGST---SGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPK-QAQVKSVAPFGLCFNSNK 309 (403)
T ss_dssp EEEEEETTEEEECC---------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCG-GGEECCCTTCSCEECGGG
T ss_pred EEEEEECCEEcccCChhHeeeccCC---CCCEEEECCCccEEeCHHHHHHHHHHHHHHhcc-ccccCCCCCCCceEECCC
Confidence 99999999988 65544432 122 567999999999999999999999999776532 111111111223443211
Q ss_pred CCcccCCCeEEEEecCC--CEEEeCCCceEEEeCCCeEEEEEEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEE-
Q 044367 363 NRDLQGFPAMAFHFAGG--ADLVLDAESVFYQESSSVFCLAVGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYF- 439 (450)
Q Consensus 363 ~~~~~~~P~i~f~f~gg--~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGf- 439 (450)
...+|.|+|+|+|+ ++|+|++++|+++..++..|++++...... .+.||||+.|||++|+|||++++||||
T Consensus 310 ---~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~---~~~~ILG~~fl~~~yvvfD~~~~rIGf~ 383 (403)
T 3aup_A 310 ---INAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQP---RAEITLGARQLEENLVVFDLARSRVGFS 383 (403)
T ss_dssp ---CCCCCCEEEEESSTTCCEEEECHHHHEEEC---CEEECEEECCSCC---SSSEEECHHHHTTSCEEEETTTTEEEEE
T ss_pred ---cCcCCcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCCCC---CCcEEEChHHhcCeEEEEECCCCEEEEe
Confidence 24799999999955 699999999999876667999887765321 246999999999999999999999999
Q ss_pred ------EcCCCCCccC
Q 044367 440 ------QRIDCELLAD 449 (450)
Q Consensus 440 ------a~~~c~~~~~ 449 (450)
++++|+++.+
T Consensus 384 A~~~~~~~~~C~~~~~ 399 (403)
T 3aup_A 384 TSSLHSHGVKCADLFN 399 (403)
T ss_dssp SSCGGGGTCCGGGSCC
T ss_pred cccccccCCCcccccc
Confidence 7888988754
No 6
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.6e-55 Score=431.34 Aligned_cols=304 Identities=22% Similarity=0.312 Sum_probs=241.4
Q ss_pred CcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCC--CCCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEe
Q 044367 95 TVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCE--QCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNI 171 (450)
Q Consensus 95 ~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~--~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~ 171 (450)
.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.. +.|||++|+|++. ..|.|.+
T Consensus 21 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~----------------~~~~~~i 84 (351)
T 1tzs_A 21 LDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQ----------------PGQSFSI 84 (351)
T ss_dssp SSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCBC----------------CSCEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCCCcCCcccCcceEE----------------CCCEEEE
Confidence 3479999999999999999999999999999999998 5977 8999999999998 6889999
Q ss_pred eeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCC-C-CCCcceeeecCCCCCC---CCcHHhhh-------
Q 044367 172 RYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHF-S-DEQFTGVFGLGPATSS---THSLVEKV------- 239 (450)
Q Consensus 172 ~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GIlGLg~~~~~---~~sl~~ql------- 239 (450)
.|++|+ ++|.+++|+|+|++ +.++++.|||++...+. | ....+||||||++..+ ..++++||
T Consensus 85 ~Yg~Gs-~~G~~~~D~v~ig~-----~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~ 158 (351)
T 1tzs_A 85 QYGTGS-LSGIIGADQVSVEG-----LTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVD 158 (351)
T ss_dssp ESSSCE-EEEEEEEEEEEETT-----EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCS
T ss_pred EeCCCC-eEEEEEEeEEEECC-----eEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCC
Confidence 999998 69999999999998 89999999999987653 2 2358999999998432 12344443
Q ss_pred cCceEEeecCCCCCCcccceEEecCCCc----CcceecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCCceE
Q 044367 240 GSKFSYCIGNLNYFEYAYNMLILGEGAI----LEGDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAGVF 315 (450)
Q Consensus 240 ~~~Fs~~l~~~~~~~~~~G~l~fG~~~d----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~~i 315 (450)
.++||+||.+.... ...|.|+||+.+. .++.|+|+ ...++|.|.+++|+|+++.+... ....+|
T Consensus 159 ~~~FS~~L~~~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~~~~~~~~----------~~~~ai 226 (351)
T 1tzs_A 159 LPMFSVYMSSNPEG-GAGSELIFGGYDHSHFSGSLNWVPV-TKQAYWQIALDNIQVGGTVMFCS----------EGCQAI 226 (351)
T ss_dssp SSEEEEECCCCC---CTTCEEEETSCCGGGBCSCCEEEEC-SEETTEEEEEEEEEETTEEEECT----------TCEEEE
T ss_pred CCEEEEEEcCCCCC-CCCCEEEECCCCHHHcCCceEEEec-CCCceEEEEeCEEEECCceEEcC----------CCceEE
Confidence 57999999886432 1248999995432 23567777 45689999999999999875421 156899
Q ss_pred EeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEEEeCC
Q 044367 316 IDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFYQESS 395 (450)
Q Consensus 316 iDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~ 395 (450)
|||||++++||.+++++|.+++++... . +.+.++|+. ...+|+|+|+|+ |.+++||+++|+++...
T Consensus 227 iDSGTs~~~lP~~~~~~l~~~~~~~~~------~-g~~~~~C~~------~~~~P~i~f~f~-g~~~~i~~~~yi~~~~~ 292 (351)
T 1tzs_A 227 VDTGTSLITGPSDKIKQLQNAIGAAPV------D-GEYAVECAN------LNVMPDVTFTIN-GVPYTLSPTAYTLLDFV 292 (351)
T ss_dssp ECTTCSSEEECHHHHHHHHHHHTCEEC------S-SSEEECGGG------GGGSCCEEEEET-TEEEEECTTTSEECC--
T ss_pred eccCCcceeCCHHHHHHHHHHhCCccc------C-CeEEEeCCC------CccCCcEEEEEC-CEEEEECHHHhEeeccC
Confidence 999999999999999999999865431 1 334679986 257899999997 89999999999987543
Q ss_pred --CeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCCCCCc
Q 044367 396 --SVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRIDCELL 447 (450)
Q Consensus 396 --~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~c~~~ 447 (450)
+..|+. +...... ....+.||||++|||++|+|||++++|||||+++|...
T Consensus 293 ~~~~~C~~~~~~~~~~-~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~ 346 (351)
T 1tzs_A 293 DGMQFCSSGFQGLDIH-PPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSH 346 (351)
T ss_dssp ---CCEEESEEECCCC-TTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC----
T ss_pred CCCCeEEEEEEECCCC-CCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccc
Confidence 457985 6554321 01124699999999999999999999999999998763
No 7
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=3.3e-55 Score=430.80 Aligned_cols=292 Identities=20% Similarity=0.342 Sum_probs=242.4
Q ss_pred cceEEEEEEECCCCceEEEEEECCCCceeEe-----CCCCCCCCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCcee
Q 044367 96 VPVFYVNFSIGQPPVPQLAVLDTGSSLIWVK-----CQPCEQCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWY 169 (450)
Q Consensus 96 ~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~-----~~~C~~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~ 169 (450)
+..|+++|.||||||++.|+|||||+++||+ |..|..|.. +.|||++|+|++. ..|.|
T Consensus 11 ~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~----------------~~~~~ 74 (339)
T 3fv3_A 11 GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKN----------------LGAAF 74 (339)
T ss_dssp SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEE----------------EEEEE
T ss_pred CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceee----------------CCceE
Confidence 3789999999999999999999999999998 666667877 8999999999998 57899
Q ss_pred EeeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCCCCCCcceeeecCCCCCC-------------CCcHH
Q 044367 170 NIRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHFSDEQFTGVFGLGPATSS-------------THSLV 236 (450)
Q Consensus 170 ~~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GIlGLg~~~~~-------------~~sl~ 236 (450)
.+.|++|+.+.|.+++|+|+|++ +.++++.|||++...+ .+||||||++..+ ..+|+
T Consensus 75 ~i~Yg~gs~~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~~-----~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~ 144 (339)
T 3fv3_A 75 TIRYGDGSTSQGTWGKDTVTING-----VSITGQQIADVTQTSV-----DQGILGIGYTSNEAVYDTSGRQTTPNYDNVP 144 (339)
T ss_dssp EEECTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEESS-----SSCEEECSCGGGCCCBCTTSCBCSCCCCCHH
T ss_pred EEEECCCceEEEEEEEEEEEECC-----EEECceEEEEEEecCC-----CceeEEecCccccccccccccccCccCCcHH
Confidence 99999998789999999999998 8999999999998764 7999999998432 13477
Q ss_pred hhh-------cCceEEeecCCCCCCcccceEEecCCCcCc-----ceecccccCCCceEEEEeeEEECCEEeecCCcccc
Q 044367 237 EKV-------GSKFSYCIGNLNYFEYAYNMLILGEGAILE-----GDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFK 304 (450)
Q Consensus 237 ~ql-------~~~Fs~~l~~~~~~~~~~G~l~fG~~~d~~-----~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~ 304 (450)
.|| .++||+||.+... ..|.|+||+ .|.+ +.|.|+ ....+|.|++++|+|+++.+..
T Consensus 145 ~~L~~~g~i~~~~fsl~l~~~~~---~~G~l~fGg-~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~g~~~~~------ 213 (339)
T 3fv3_A 145 VTLKKQGKIRTNAYSLYLNSPSA---ETGTIIFGG-VDNAKYSGKLVAEQV-TSSQALTISLASVNLKGSSFSF------ 213 (339)
T ss_dssp HHHHHTTSCSSSEEEEECCCTTC---SEEEEEETE-EETTSBSSCCEEEEB-CCSSSCEEEEEEEEESSCEEEE------
T ss_pred HHHHHCCCCCCceEEEEECCCCC---CCeEEEEee-echHHeecceEEEec-ccCccEEEEEEEEEECCEeecC------
Confidence 776 4699999987542 348999995 4444 456777 4456999999999999998764
Q ss_pred cCCCcCCCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEe
Q 044367 305 KNDTWSDAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVL 384 (450)
Q Consensus 305 ~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l 384 (450)
...+||||||++++||++++++|++++++.+... ....+.+.++|+. ..+|.|+|+|++|.+++|
T Consensus 214 ------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~--~~~~~~~~~~C~~-------~~~p~i~f~f~~g~~~~v 278 (339)
T 3fv3_A 214 ------GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQV--ARDQYLYFIDCNT-------DTSGTTVFNFGNGAKITV 278 (339)
T ss_dssp ------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE--ETTEEEEEECTTC-------CCCSEEEEEETTSCEEEE
T ss_pred ------CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc--cccCceEEEecCC-------CCCCcEEEEECCCCEEEE
Confidence 4579999999999999999999999998654310 0012234679985 468999999976899999
Q ss_pred CCCceEEEeCCCeEE-EEEEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCCCCCcc
Q 044367 385 DAESVFYQESSSVFC-LAVGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRIDCELLA 448 (450)
Q Consensus 385 ~~~~y~~~~~~~~~C-~~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~ 448 (450)
|+++|+++..++ .| +++.. . +.||||++|||++|+|||++++|||||+++|++.+
T Consensus 279 ~~~~~~~~~~~~-~C~~~i~~-~-------~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s 334 (339)
T 3fv3_A 279 PNTEYVYQNGDG-TCLWGIQP-S-------DDTILGDNFLRHAYLLYNLDANTISIAQVKYTTDS 334 (339)
T ss_dssp EGGGGEEECSSS-CEEESEEE-C-------SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCC
T ss_pred CHHHheeeCCCC-eEEEEEEe-C-------CcEEeChHHHhCEEEEEECCCCEEEEEecCCCCcc
Confidence 999999986544 57 55665 2 25999999999999999999999999999999644
No 8
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.8e-55 Score=430.15 Aligned_cols=289 Identities=20% Similarity=0.312 Sum_probs=239.7
Q ss_pred cceEEEEEEECCCCceEEEEEECCCCceeEeCC--CCCC---------CCC-CCCCCCCCCcceeecCCCCCCCCCCCCC
Q 044367 96 VPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQ--PCEQ---------CGA-TTFDPSKSLTYATLPCDSSYCTNDCGGY 163 (450)
Q Consensus 96 ~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~--~C~~---------C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~ 163 (450)
+.+|+++|.||||+|++.|+|||||+++||+|. +|.. |.. +.|||++|+|++.
T Consensus 11 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~--------------- 75 (334)
T 1j71_A 11 GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQN--------------- 75 (334)
T ss_dssp SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEE---------------
T ss_pred CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCccc---------------
Confidence 378999999999999999999999999999876 6763 655 8999999999998
Q ss_pred CCCceeEeeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCCCCCCcceeeecCCCCCC-----CCcHHhh
Q 044367 164 PDECWYNIRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHFSDEQFTGVFGLGPATSS-----THSLVEK 238 (450)
Q Consensus 164 ~~~~~~~~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GIlGLg~~~~~-----~~sl~~q 238 (450)
..|.|.+.|++|+.++|.+++|+|+|++ +.++++.|||++... ..+||||||+.... ..+++.|
T Consensus 76 -~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~-----~~~~~~~fg~~~~~~-----~~~GilGLg~~~~~~~~~~~~~~~~~ 144 (334)
T 1j71_A 76 -LNQDFSIEYGDLTSSQGSFYKDTVGFGG-----ISIKNQQFADVTTTS-----VDQGIMGIGFTADEAGYNLYDNVPVT 144 (334)
T ss_dssp -EEEEEEEEBTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEES-----SSSCEEECSCGGGSSTTCCCCCHHHH
T ss_pred -CCCceEEEECCCCEEEEEEEEEEEEECC-----EEEccEEEEEEEecC-----CCccEEEEcCCcccCccccCCcHHHH
Confidence 5789999999998779999999999998 899999999999864 48999999998432 2366666
Q ss_pred h-------cCceEEeecCCCCCCcccceEEecCCCcCcc-----eecccccCCCceEEEEeeEEECCEEeecCCcccccC
Q 044367 239 V-------GSKFSYCIGNLNYFEYAYNMLILGEGAILEG-----DSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKN 306 (450)
Q Consensus 239 l-------~~~Fs~~l~~~~~~~~~~G~l~fG~~~d~~~-----~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~ 306 (450)
| +++||+||.+.. ...|.|+||+ .|+++ .|+|+ ....+|.|.+++|+|+++.+..
T Consensus 145 L~~qg~i~~~~Fs~~l~~~~---~~~G~l~fGg-~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~g~~~~~-------- 211 (334)
T 1j71_A 145 LKKQGIINKNAYSLYLNSED---ASTGKIIFGG-VDNAKYTGTLTALPV-TSSVELRVHLGSINFDGTSVST-------- 211 (334)
T ss_dssp HHHTTSCSSSEEEEECCCTT---CSEEEEEETE-EETTSEEEEEEEEEC-CCSSSCEEEEEEEEETTEEEEE--------
T ss_pred HHHCCCCCccEEEEEeCCCC---CCCeEEEEee-echHHccCceEEEEc-cCCCeEEEEEeEEEECCEeccC--------
Confidence 5 479999998753 2348999994 55444 56666 4556999999999999998753
Q ss_pred CCcCCCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCc-cccccCccCCcccCCCeEEEEecCCCEEEeC
Q 044367 307 DTWSDAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAW-HLCYSGNINRDLQGFPAMAFHFAGGADLVLD 385 (450)
Q Consensus 307 ~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~ 385 (450)
...+||||||++++||++++++|++++++.... ....+. ++|+ .+|.|+|+|++|++++||
T Consensus 212 ----~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~-----~~~~~~~~~C~---------~~p~i~f~f~~g~~~~i~ 273 (334)
T 1j71_A 212 ----NADVVLDSGTTITYFSQSTADKFARIVGATWDS-----RNEIYRLPSCD---------LSGDAVFNFDQGVKITVP 273 (334)
T ss_dssp ----EEEEEECTTCSSEEECHHHHHHHHHHHTCEEET-----TTTEEECSSSC---------CCSEEEEEESTTCEEEEE
T ss_pred ----CccEEEeCCCCcEecCHHHHHHHHHHcCCcccC-----CCceEEEEcCC---------CCCceEEEEcCCcEEEEC
Confidence 457999999999999999999999999776421 112234 8895 279999999658999999
Q ss_pred CCceEEEeCCCeEEEEEEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCCCCCcc
Q 044367 386 AESVFYQESSSVFCLAVGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRIDCELLA 448 (450)
Q Consensus 386 ~~~y~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~ 448 (450)
+++|+++..++..|+..+...+ .||||+.|||++|+|||++++|||||+++|++.+
T Consensus 274 ~~~y~~~~~~~~~C~~~i~~~~-------~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 329 (334)
T 1j71_A 274 LSELILKDSDSSICYFGISRND-------ANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSS 329 (334)
T ss_dssp GGGGEEECSSSSCEEESEEECT-------TCEECHHHHTTEEEEEETTTTEEEEEEECCCSCC
T ss_pred HHHheeecCCCCeeEEEEeECC-------CcEEChHhhccEEEEEECCCCEEEEEecCCCCcc
Confidence 9999998665556986444332 3999999999999999999999999999998643
No 9
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.3e-54 Score=424.65 Aligned_cols=297 Identities=22% Similarity=0.379 Sum_probs=240.8
Q ss_pred cceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCC--CCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEee
Q 044367 96 VPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQ--CGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNIR 172 (450)
Q Consensus 96 ~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~--C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~~ 172 (450)
+.+|+++|.||||+|++.|+|||||+++||+|..|.. |.. +.|||++|+|++. ..|.|.+.
T Consensus 12 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~----------------~~~~~~i~ 75 (329)
T 1dpj_A 12 NAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKA----------------NGTEFAIQ 75 (329)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEE----------------EEEEEEEE
T ss_pred CCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCcCcCCcccCcCeEE----------------CCcEEEEE
Confidence 3799999999999999999999999999999999987 866 8999999999998 68899999
Q ss_pred eCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCC-CCC-CCcceeeecCCCCCCC---C----cHHhh--h-c
Q 044367 173 YTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAH-FSD-EQFTGVFGLGPATSST---H----SLVEK--V-G 240 (450)
Q Consensus 173 Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~-~~~-~~~~GIlGLg~~~~~~---~----sl~~q--l-~ 240 (450)
|++|+ ++|.+++|+|+|++ +.++++.|||++...+ .|. ...+||||||+...+. . ++++| + .
T Consensus 76 Yg~Gs-~~G~~~~D~v~ig~-----~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~ 149 (329)
T 1dpj_A 76 YGTGS-LEGYISQDTLSIGD-----LTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDE 149 (329)
T ss_dssp ETTEE-EEEEEEEEEEEETT-----EEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSS
T ss_pred ECCce-EEEEEEEEEEEECC-----eEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCC
Confidence 99996 69999999999998 8999999999998765 222 3589999999984321 1 23444 2 5
Q ss_pred CceEEeecCCCCCCcccceEEecCCCcCc-----ceecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCCceE
Q 044367 241 SKFSYCIGNLNYFEYAYNMLILGEGAILE-----GDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAGVF 315 (450)
Q Consensus 241 ~~Fs~~l~~~~~~~~~~G~l~fG~~~d~~-----~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~~i 315 (450)
++||+||.+........|.|+||+ .|++ +.|+|+ ..+.+|.|.+++|+|+++.+... ...+|
T Consensus 150 ~~Fs~~l~~~~~~~~~~G~l~fGg-~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~~~~~~~~-----------~~~ai 216 (329)
T 1dpj_A 150 KRFAFYLGDTSKDTENGGEATFGG-IDESKFKGDITWLPV-RRKAYWEVKFEGIGLGDEYAELE-----------SHGAA 216 (329)
T ss_dssp SEEEEEECCGGGTCSSSEEEEESS-CCGGGEEEEEEEEEC-SSBTTBEEEEEEEEETTEEEECS-----------SCEEE
T ss_pred CEEEEEecCCCCCCCCCcEEEEcC-CChhhcCCceEEEEc-CCCceEEEEeeeEEECCeEecCC-----------CccEE
Confidence 799999987532122348999995 5544 456776 45689999999999999887532 67899
Q ss_pred EeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEEEeCC
Q 044367 316 IDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFYQESS 395 (450)
Q Consensus 316 iDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~ 395 (450)
|||||++++||++++++|++++++.. ...+.+.++|+. ...+|+|+|+|+ |.+++||+++|+++..
T Consensus 217 iDSGTt~~~lP~~~~~~l~~~~~~~~------~~~g~~~~~C~~------~~~~P~i~f~f~-g~~~~i~~~~y~~~~~- 282 (329)
T 1dpj_A 217 IDTGTSLITLPSGLAEMINAEIGAKK------GWTGQYTLDCNT------RDNLPDLIFNFN-GYNFTIGPYDYTLEVS- 282 (329)
T ss_dssp ECTTCSCEEECHHHHHHHHHHHTCEE------CTTSSEEECGGG------GGGCCCEEEEET-TEEEEECTTTSEEEET-
T ss_pred eeCCCCcEECCHHHHHHHHHHhCCcc------CCCCeEEEECCC------CCcCCcEEEEEC-CEEEEECHHHhEecCC-
Confidence 99999999999999999999986441 112334578975 257899999998 8999999999999865
Q ss_pred CeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 396 SVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 396 ~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
..|+. +...... ...++.||||++|||++|+|||++++|||||+++
T Consensus 283 -~~C~~~~~~~~~~-~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 283 -GSCISAITPMDFP-EPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp -TEEEECEEECCCC-TTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -CEEEEEEEecccC-CCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 57985 5554211 0112479999999999999999999999999875
No 10
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=7.2e-55 Score=431.88 Aligned_cols=302 Identities=18% Similarity=0.244 Sum_probs=246.2
Q ss_pred CcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCC---CCCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeE
Q 044367 95 TVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCE---QCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYN 170 (450)
Q Consensus 95 ~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~---~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~ 170 (450)
.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.. +.|||++|+|++. ..|.|.
T Consensus 16 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~----------------~~~~~~ 79 (361)
T 1mpp_A 16 DLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKE----------------TDYNLN 79 (361)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEE----------------EEEEEE
T ss_pred CCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEe----------------cCCeEE
Confidence 3489999999999999999999999999999999998 6987 8999999999998 578999
Q ss_pred eeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCC------CCC-CCcceeeecCCCCCC---------CCc
Q 044367 171 IRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAH------FSD-EQFTGVFGLGPATSS---------THS 234 (450)
Q Consensus 171 ~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~------~~~-~~~~GIlGLg~~~~~---------~~s 234 (450)
+.|++|+ +.|.+++|+|+|++ +.++++.|||++...+ .+. ...+||||||++..+ ..+
T Consensus 80 i~Yg~Gs-~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~ 153 (361)
T 1mpp_A 80 ITYGTGG-ANGIYFRDSITVGG-----ATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNT 153 (361)
T ss_dssp EECSSCE-EEEEEEEEEEEETT-----EEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCC
T ss_pred EEECCce-EEEEEEEEEEEECC-----EEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCC
Confidence 9999999 69999999999998 8999999999998754 232 358999999998332 223
Q ss_pred HHhhh-------cCceEEeecCCCCCCcccceEEecCCCc----CcceecccccCCC---ceEEEEeeEEECCEEeecCC
Q 044367 235 LVEKV-------GSKFSYCIGNLNYFEYAYNMLILGEGAI----LEGDSTPMSVIDG---SYYVTLEGISLGEKMLDIDP 300 (450)
Q Consensus 235 l~~ql-------~~~Fs~~l~~~~~~~~~~G~l~fG~~~d----~~~~~~pl~~~~~---~~~v~l~~i~vg~~~~~~~~ 300 (450)
+++|| .++||+||.+. ...|.|+||+.+. .++.|+|+....+ +|.|.|++|+|+++.+....
T Consensus 154 ~~~~l~~~g~i~~~~FS~~l~~~----~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~ 229 (361)
T 1mpp_A 154 VHVNLYKQGLISSPVFSVYMNTN----DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSFD 229 (361)
T ss_dssp HHHHHHHTTSSSSSEEEEECCCS----SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHcCCCCCcEEEEEecCC----CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeeccCC
Confidence 44444 57999999885 2348999995432 2356778743333 99999999999998764221
Q ss_pred cccccCCCcCCCceE-EeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCC-CeEEEEe--
Q 044367 301 NLFKKNDTWSDAGVF-IDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGF-PAMAFHF-- 376 (450)
Q Consensus 301 ~~~~~~~~~~~~~~i-iDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~-P~i~f~f-- 376 (450)
...+| |||||++++||++++++|++++.+.... ..+.+.++|+. ...+ |+|+|+|
T Consensus 230 ----------~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~~-----~~g~~~~~C~~------~~~~~p~i~f~f~~ 288 (361)
T 1mpp_A 230 ----------GAQAFTIDTGTNFFIAPSSFAEKVVKAALPDATE-----SQQGYTVPCSK------YQDSKTTFSLVLQK 288 (361)
T ss_dssp ----------EEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCEE-----ETTEEEEEHHH------HTTCCCEEEEEEEC
T ss_pred ----------CCEEEEECCCCCceeCCHHHHHHHHHHhCCcccC-----CCCcEEEECCC------cccCCCcEEEEEEc
Confidence 56799 9999999999999999999999664321 12234689986 2467 9999999
Q ss_pred cC----CCEEEeCCCceEEEeCC-CeEEE-EEEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCCCCCccC
Q 044367 377 AG----GADLVLDAESVFYQESS-SVFCL-AVGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRIDCELLAD 449 (450)
Q Consensus 377 ~g----g~~~~l~~~~y~~~~~~-~~~C~-~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~~ 449 (450)
++ |.+++||+++|+++... +..|+ ++.... . +.||||++|||++|+|||++++|||||+++|+..+|
T Consensus 289 g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~-~-----~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~~~~ 361 (361)
T 1mpp_A 289 SGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG-G-----NQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYEND 361 (361)
T ss_dssp TTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES-S-----SCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTCCC
T ss_pred CCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC-C-----CCEEEChHHhccEEEEEECCCCEEEEEEcccCCCCC
Confidence 42 78999999999998753 56898 566542 1 359999999999999999999999999999997654
No 11
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=3.4e-55 Score=428.48 Aligned_cols=301 Identities=19% Similarity=0.245 Sum_probs=241.7
Q ss_pred cccc-cCCCCcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCCC--CC-CCCCCCCCCcceeecCCCCCCCCCCCC
Q 044367 87 AHLH-PGISTVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQC--GA-TTFDPSKSLTYATLPCDSSYCTNDCGG 162 (450)
Q Consensus 87 ~~~~-~~~~~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~C--~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~ 162 (450)
+++. +... +.+|+++|.||||+|++.|+|||||+++||+|..|..| .. +.|||++|+|++.+
T Consensus 5 v~~~~~~~~-~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~------------- 70 (329)
T 3c9x_A 5 APNHPSDSA-DSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKV------------- 70 (329)
T ss_dssp EEEEESSTT-CCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEEC-------------
T ss_pred eeeecCCCC-CCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEc-------------
Confidence 4444 4433 48999999999999999999999999999999999885 34 89999999999986
Q ss_pred CCCCceeEeeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCCCC--CCcceeeecCCCCCC------CCc
Q 044367 163 YPDECWYNIRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHFSD--EQFTGVFGLGPATSS------THS 234 (450)
Q Consensus 163 ~~~~~~~~~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~--~~~~GIlGLg~~~~~------~~s 234 (450)
+.|.|.+.|++|+.++|.+++|+|+|++ +.++++.|||++...+.+. ...+||||||+...+ ..+
T Consensus 71 --~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 143 (329)
T 3c9x_A 71 --SGASWSISYGDGSSSSGDVYTDKVTIGG-----FSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKT 143 (329)
T ss_dssp --TTCBEEEECTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCC
T ss_pred --CCCeEEEEeCCCCcEEEEEEEEEEEECC-----EEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCC
Confidence 5789999999999779999999999998 8999999999998765332 258999999998432 124
Q ss_pred HHhhh-----cCceEEeecCCCCCCcccceEEecCCCc----CcceecccccCCCceEEEEeeEEECCEEeecCCccccc
Q 044367 235 LVEKV-----GSKFSYCIGNLNYFEYAYNMLILGEGAI----LEGDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKK 305 (450)
Q Consensus 235 l~~ql-----~~~Fs~~l~~~~~~~~~~G~l~fG~~~d----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~ 305 (450)
++++| .++||+||.+. ..|.|+||+.+. .++.|+|+....++|.|.+++|+|+++.+...
T Consensus 144 ~~~~l~~~i~~~~FS~~l~~~-----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~------ 212 (329)
T 3c9x_A 144 WFSNAASSLAEPLFTADLRHG-----QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLNRN------ 212 (329)
T ss_dssp HHHHHHTTSSSSEEEEECCSS-----SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCCSC------
T ss_pred HHHHHHHhcCCCEEEEEecCC-----CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEeccCC------
Confidence 55554 67999999863 248999995442 23467888546789999999999999865311
Q ss_pred CCCcCCCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeC
Q 044367 306 NDTWSDAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLD 385 (450)
Q Consensus 306 ~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~ 385 (450)
...+||||||++++||++++++|++++.+.... ...+.+.++|+ ..+|+|+|+|+ |++++||
T Consensus 213 -----~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~~----~~~~~~~~~C~--------~~~P~i~f~f~-g~~~~ip 274 (329)
T 3c9x_A 213 -----SIDGIADTGTTLLLLDDNVVDAYYANVQSAQYD----NQQEGVVFDCD--------EDLPSFSFGVG-SSTITIP 274 (329)
T ss_dssp -----CEEEEECTTCCSEEECHHHHHHHHTTCTTCEEE----TTTTEEEEETT--------CCCCCEEEEET-TEEEEEC
T ss_pred -----CceEEEECCCCcEeCCHHHHHHHHHhCCCcEEc----CCCCEEEEECC--------CCCCcEEEEEC-CEEEEEC
Confidence 568999999999999999999999887433211 01122357897 36899999998 9999999
Q ss_pred CCceEEEeCC--CeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcC
Q 044367 386 AESVFYQESS--SVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRI 442 (450)
Q Consensus 386 ~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~ 442 (450)
+++|++...+ ...|++ +...... +.||||++|||++|+|||++++|||||+.
T Consensus 275 ~~~~~~~~~~~~~~~C~~~i~~~~~~-----~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 275 GDLLNLTPLEEGSSTCFGGLQSSSGI-----GINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp GGGGEEEESSTTCSEEEESEEECTTT-----TSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred HHHeeeeccCCCCCeEEEEEEcCCCC-----CcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 9999987643 478997 5544321 46999999999999999999999999974
No 12
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=3.6e-55 Score=428.31 Aligned_cols=301 Identities=20% Similarity=0.244 Sum_probs=241.8
Q ss_pred cccc-cCCCCcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCCCC--CCCCCCCCCCcceeecCCCCCCCCCCCCC
Q 044367 87 AHLH-PGISTVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQCG--ATTFDPSKSLTYATLPCDSSYCTNDCGGY 163 (450)
Q Consensus 87 ~~~~-~~~~~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~C~--~~~y~p~~SsT~~~~~c~~~~C~~~c~~~ 163 (450)
+++. +... +.+|+++|.||||+|++.|+|||||+++||+|.+|..|. .+.|||++|+|++.+
T Consensus 5 v~~~~~~~~-~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~y~~~~SsT~~~~-------------- 69 (329)
T 1oew_A 5 ATTTPIDSL-DDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVXQTIYTPSKSTTAKLL-------------- 69 (329)
T ss_dssp EEEEESSTT-CCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-CCCBCGGGCTTCEEE--------------
T ss_pred eEeeecCCC-CCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCccccccCccCCccCccceec--------------
Confidence 4444 4433 489999999999999999999999999999999999863 389999999999986
Q ss_pred CCCceeEeeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCCCC--CCcceeeecCCCCCC------CCcH
Q 044367 164 PDECWYNIRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHFSD--EQFTGVFGLGPATSS------THSL 235 (450)
Q Consensus 164 ~~~~~~~~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~--~~~~GIlGLg~~~~~------~~sl 235 (450)
+.|.|.+.|++|+.++|.+++|+|+|++ +.++++.|||++...+.+. ...+||||||+...+ ..++
T Consensus 70 -~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 143 (329)
T 1oew_A 70 -SGATWSISYGDGSSSSGDVYTDTVSVGG-----LTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTF 143 (329)
T ss_dssp -EEEEEEEECTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCH
T ss_pred -CCCeEEEEeCCCCcEEEEEEEEEEEECC-----EEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCH
Confidence 5789999999999779999999999998 8999999999998765332 258999999998432 2345
Q ss_pred Hhhh-----cCceEEeecCCCCCCcccceEEecCCCc----CcceecccccCCCceEEEEeeEEECCEEeecCCcccccC
Q 044367 236 VEKV-----GSKFSYCIGNLNYFEYAYNMLILGEGAI----LEGDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKN 306 (450)
Q Consensus 236 ~~ql-----~~~Fs~~l~~~~~~~~~~G~l~fG~~~d----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~ 306 (450)
++|| .++||+||.+. ..|.|+||+.+. .++.|+|+....++|.|.+++|+|+++.+...
T Consensus 144 ~~~l~~~i~~~~FS~~L~~~-----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~------- 211 (329)
T 1oew_A 144 FDNAKASLDSPVFTADLGYH-----APGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKST------- 211 (329)
T ss_dssp HHHHTTTSSSSEEEEECCSS-----SCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEEE-------
T ss_pred HHHHHHhccCcEEEEEccCC-----CCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccCC-------
Confidence 5554 67999999863 248999995442 24567888546789999999999999765421
Q ss_pred CCcCCCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCC
Q 044367 307 DTWSDAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDA 386 (450)
Q Consensus 307 ~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~ 386 (450)
...+||||||++++||++++++|++++.+.... ...+.+.++|+ ..+|+|+|+|+ |++++||+
T Consensus 212 ----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~~----~~~g~~~~~C~--------~~~P~i~f~fg-g~~~~ip~ 274 (329)
T 1oew_A 212 ----SIDGIADTGTTLLYLPATVVSAYWAQVSGAKSS----SSVGGYVFPCS--------ATLPSFTFGVG-SARIVIPG 274 (329)
T ss_dssp ----EEEEEECTTCCSEEECHHHHHHHHTTSTTCEEE----TTTTEEEEETT--------CCCCCEEEEET-TEEEEECH
T ss_pred ----CceEEEeCCCCCEECCHHHHHHHHHhCCCcEEc----CCCCEEEEECC--------CCCCcEEEEEC-CEEEEECH
Confidence 567999999999999999999999988433211 01122357897 36899999996 99999999
Q ss_pred CceEEEeCC--CeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEEC-CCCEEEEEcC
Q 044367 387 ESVFYQESS--SVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDL-VSKQLYFQRI 442 (450)
Q Consensus 387 ~~y~~~~~~--~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~-~~~~iGfa~~ 442 (450)
++|++...+ ...|++ +...... +.||||++|||++|+|||+ +++|||||++
T Consensus 275 ~~~~~~~~~~~~~~C~~~i~~~~~~-----~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 275 DYIDFGPISTGSSSCFGGIQSSAGI-----GINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp HHHEEEESSTTCSEEEESEEESTTT-----SSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred HHeeeeecCCCCCeEEEEEEeCCCC-----CceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 999987532 478997 4444321 4699999999999999999 9999999974
No 13
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=6.2e-55 Score=425.74 Aligned_cols=290 Identities=19% Similarity=0.318 Sum_probs=238.7
Q ss_pred cceEEEEEEECCCCceEEEEEECCCCceeEeCCCCC--CCCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEee
Q 044367 96 VPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCE--QCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNIR 172 (450)
Q Consensus 96 ~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~--~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~~ 172 (450)
+.+|+++|.||||||++.|+|||||+++||+|..|. .|.. +.|||++|+|++. ..|.|.+.
T Consensus 13 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~----------------~~~~~~i~ 76 (323)
T 3cms_A 13 DSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKSSTFQN----------------LGKPLSIH 76 (323)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEE----------------EEEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCCCCCCCccCCCeEE----------------CCcEEEEE
Confidence 379999999999999999999999999999999994 4876 8999999999998 57899999
Q ss_pred eCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCC-CCC-CCcceeeecCCCCCC---CCcHHhhh-------c
Q 044367 173 YTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAH-FSD-EQFTGVFGLGPATSS---THSLVEKV-------G 240 (450)
Q Consensus 173 Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~-~~~-~~~~GIlGLg~~~~~---~~sl~~ql-------~ 240 (450)
|++|+ ++|.+++|+|+|++ +.++++.|||++...+ .|. ...+||||||++..+ ..+++++| .
T Consensus 77 Yg~Gs-~~G~~~~D~v~ig~-----~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~ 150 (323)
T 3cms_A 77 YGTGS-MQGILGYDTVTVSN-----IVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQ 150 (323)
T ss_dssp ETTEE-EEEEEEEEEEEETT-----EEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSS
T ss_pred eCCCC-eEEEEEEEEEEECC-----eEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCC
Confidence 99998 69999999999998 8999999999998765 221 358999999998432 22444443 5
Q ss_pred CceEEeecCCCCCCcccceEEecCCCcCc-----ceecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCCceE
Q 044367 241 SKFSYCIGNLNYFEYAYNMLILGEGAILE-----GDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAGVF 315 (450)
Q Consensus 241 ~~Fs~~l~~~~~~~~~~G~l~fG~~~d~~-----~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~~i 315 (450)
++||+||.+... . |.|+||+ .|++ +.|+|+ ....+|.|.+++|+|+++.+..+. ...+|
T Consensus 151 ~~FS~~l~~~~~---~-G~l~fGg-~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~~~~~~~~~----------~~~ai 214 (323)
T 3cms_A 151 DLFSVYMDRNGQ---E-SMLTLGA-IDPSYYTGSLHWVPV-TVQQYWQFTVDSVTISGVVVACEG----------GCQAI 214 (323)
T ss_dssp SEEEEECCTTSS---C-EEEEESC-CCGGGEEEEEEEEEC-SSBTTBEEEEEEEEETTEEEESTT----------CEEEE
T ss_pred CEEEEEECCCCC---C-EEEEECC-CChhhccCceEEEEC-ccCCeEEEEEeeEEECCEEeecCC----------CcEEE
Confidence 799999988532 2 8899995 5544 456777 456899999999999998875431 56899
Q ss_pred EeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEEEeCC
Q 044367 316 IDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFYQESS 395 (450)
Q Consensus 316 iDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~ 395 (450)
|||||++++||++++++|++++++... ..+.+.++|+. ...+|+|+|+|+ |.+++||+++|+++ .
T Consensus 215 iDSGTt~~~lP~~~~~~l~~~~~~~~~------~~g~~~~~C~~------~~~~P~i~f~f~-g~~~~i~~~~y~~~--~ 279 (323)
T 3cms_A 215 LDTGTSKLVGPSSDILNIQQAIGATQN------QYGEFDIDCDN------LSYMPTVVFEIN-GKMYPLTPSAYTSQ--D 279 (323)
T ss_dssp ECTTCCSEEECHHHHHHHHHHHTCEEE------TTTEEEECTTC------TTTSCCEEEEET-TEEEEECHHHHEEE--E
T ss_pred EecCCccEeCCHHHHHHHHHHhCCeec------CCCcEEEECCC------CccCceEEEEEC-CEEEEECHHHhccC--C
Confidence 999999999999999999999865421 12234578986 257899999997 89999999999998 4
Q ss_pred CeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 396 SVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 396 ~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
+..|+. +...... +.||||++|||++|+|||++++|||||+++
T Consensus 280 ~~~C~~~i~~~~~~-----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 280 QGFCTSGFQSENHS-----QKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp TTEEEESEEEC--------CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEEEeCCCC-----CcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 568986 6654321 369999999999999999999999999874
No 14
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=5e-55 Score=429.83 Aligned_cols=292 Identities=16% Similarity=0.270 Sum_probs=239.5
Q ss_pred cceEEEEEEECCCCceEEEEEECCCCceeEeCC--CCCC---------CCC-CCCCCCCCCcceeecCCCCCCCCCCCCC
Q 044367 96 VPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQ--PCEQ---------CGA-TTFDPSKSLTYATLPCDSSYCTNDCGGY 163 (450)
Q Consensus 96 ~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~--~C~~---------C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~ 163 (450)
+.+|+++|.||||+|++.|+|||||+++||+|. +|.. |.. +.|||++|+|++.
T Consensus 11 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~--------------- 75 (342)
T 2qzx_A 11 AITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQN--------------- 75 (342)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEE---------------
T ss_pred CeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCccc---------------
Confidence 479999999999999999999999999999865 6763 655 8999999999998
Q ss_pred CCCceeEeeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCCCCCCcceeeecCCCCCC-----CCcHHhh
Q 044367 164 PDECWYNIRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHFSDEQFTGVFGLGPATSS-----THSLVEK 238 (450)
Q Consensus 164 ~~~~~~~~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GIlGLg~~~~~-----~~sl~~q 238 (450)
..|.|.+.|++|+.+.|.+++|+|+|++ +.++++.|||++... ..+||||||+.... ..+++.|
T Consensus 76 -~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~-----~~~GilGLg~~~~~~~~~~~~~~~~~ 144 (342)
T 2qzx_A 76 -LNTRFDIKYGDGSYAKGKLYKDTVGIGG-----VSVRDQLFANVWSTS-----ARKGILGIGFQSGEATEFDYDNLPIS 144 (342)
T ss_dssp -EEEEEEEECTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEEC-----SSSCEEECSCGGGCSSSSCCCCHHHH
T ss_pred -CCCcEEEEeCCCCeEEEEEEEEEEEECC-----EEecceEEEEEEecC-----CCcCEEEEccccccCCCccCccHHHH
Confidence 5789999999999779999999999998 899999999999864 48999999998431 2366666
Q ss_pred h-------cCceEEeecCCCCCCcccceEEecCCCcC-----cceecccccCCCceEEEEeeEEECCEEeecCCcccccC
Q 044367 239 V-------GSKFSYCIGNLNYFEYAYNMLILGEGAIL-----EGDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKN 306 (450)
Q Consensus 239 l-------~~~Fs~~l~~~~~~~~~~G~l~fG~~~d~-----~~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~ 306 (450)
| +++||+||.+.. ...|.|+||+ .|+ ++.|+|+ ....+|.|.+++|+|+++.+..
T Consensus 145 L~~qg~i~~~~Fs~~l~~~~---~~~G~l~fGg-~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~g~~~~~-------- 211 (342)
T 2qzx_A 145 LRNQGIIGKAAYSLYLNSAE---ASTGQIIFGG-IDKAKYSGSLVDLPI-TSEKKLTVGLRSVNVRGRNVDA-------- 211 (342)
T ss_dssp HHHTTSSSSSEEEEECCCTT---CSEEEEEETE-EETTSBSSCCEEEEC-CCSSSCEEEEEEEEETTEEEEE--------
T ss_pred HHHCCCcCccEEEEEeCCCC---CCCeEEEECc-cchhhEecceEEEec-cCCceEEEEEeEEEECCEecCC--------
Confidence 5 479999998753 2348999995 443 3467777 4556999999999999998753
Q ss_pred CCcCCCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCC
Q 044367 307 DTWSDAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDA 386 (450)
Q Consensus 307 ~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~ 386 (450)
...+||||||++++||++++++|++++++.... .......+.++|+ .+|.|+|+|++|++++||+
T Consensus 212 ----~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~--~~~~~~~~~~~C~---------~~p~i~f~f~~g~~~~i~~ 276 (342)
T 2qzx_A 212 ----NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKF--DSAGNKVYVADCK---------TSGTIDFQFGNNLKISVPV 276 (342)
T ss_dssp ----EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE--CTTSCEEEEECTT---------CCCEEEEEETTTEEEEEEG
T ss_pred ----CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeee--ccCCCcEEEEECC---------CCCcEEEEECCCcEEEEcH
Confidence 457999999999999999999999999776421 1111113467895 2799999996589999999
Q ss_pred CceEEEeC-----CCeEEEEEEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCCCCCcc
Q 044367 387 ESVFYQES-----SSVFCLAVGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRIDCELLA 448 (450)
Q Consensus 387 ~~y~~~~~-----~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~ 448 (450)
++|+++.. .+..|+..+...+ .||||++|||++|+|||++++|||||+++|++.+
T Consensus 277 ~~~~~~~~~~~~~~~~~C~~~i~~~~-------~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 336 (342)
T 2qzx_A 277 SEFLFQTYYTSGKPFPKCEVRIRESE-------DNILGDNFLRSAYVVYNLDDKKISMAPVKYTSES 336 (342)
T ss_dssp GGGEECCBCTTSCBCSSEEESEEECS-------SCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCC
T ss_pred HHhcccccccCCCCCCccEEEEecCC-------CcEeChHhhhcEEEEEECCCCEEEEEeeCCCCCC
Confidence 99999742 2457987544332 3999999999999999999999999999998644
No 15
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.2e-54 Score=423.42 Aligned_cols=290 Identities=20% Similarity=0.326 Sum_probs=240.7
Q ss_pred cceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCC--CCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEee
Q 044367 96 VPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQ--CGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNIR 172 (450)
Q Consensus 96 ~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~--C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~~ 172 (450)
+.+|+++|.||||||+++|++||||+++||+|..|.. |.. +.|||++|+|++. ..|.|.+.
T Consensus 10 d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~----------------~~~~~~i~ 73 (320)
T 4aa9_A 10 DSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRN----------------LGKPLSIH 73 (320)
T ss_dssp CCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEE----------------EEEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEc----------------CCcEEEEE
Confidence 4789999999999999999999999999999999985 766 8999999999998 57899999
Q ss_pred eCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCC-CCC-CCcceeeecCCCCCC---CCcHHhhh-------c
Q 044367 173 YTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAH-FSD-EQFTGVFGLGPATSS---THSLVEKV-------G 240 (450)
Q Consensus 173 Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~-~~~-~~~~GIlGLg~~~~~---~~sl~~ql-------~ 240 (450)
|++|+ +.|.+++|+|+|++ ..++++.|||++...+ .+. ...+||||||++..+ ..+++++| .
T Consensus 74 Yg~gs-~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~ 147 (320)
T 4aa9_A 74 YGTGS-MEGFLGYDTVTVSN-----IVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVAR 147 (320)
T ss_dssp ETTEE-EEEEEEEEEEEETT-----EEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSS
T ss_pred ECCcE-EEEEEEEEEEEECC-----EeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCC
Confidence 99999 59999999999998 8999999999998775 222 247999999998432 23455554 5
Q ss_pred CceEEeecCCCCCCcccceEEecCCCcCcc-----eecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCCceE
Q 044367 241 SKFSYCIGNLNYFEYAYNMLILGEGAILEG-----DSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAGVF 315 (450)
Q Consensus 241 ~~Fs~~l~~~~~~~~~~G~l~fG~~~d~~~-----~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~~i 315 (450)
++||+||.+. ...|.|+|| +.|+++ .|+|+ ...++|.|.+++|+|+++.+..+. ...+|
T Consensus 148 ~~Fs~~l~~~----~~~G~l~fG-g~d~~~~~g~l~~~p~-~~~~~w~v~l~~i~v~~~~~~~~~----------~~~~i 211 (320)
T 4aa9_A 148 DLFSVYMDRN----GQGSMLTLG-AIDPSYYTGSLHWVPV-TLQQYWQFTVDSVTINGVAVACVG----------GCQAI 211 (320)
T ss_dssp SEEEEECCSS----SSCCEEEET-CCCGGGEEEEEEEEEC-SSBTTBEEEECEEEETTEEEESTT----------CEEEE
T ss_pred ceEEEEeCCC----CCCeEEEEc-ccCHHHccCceEEEEc-ccCCceEEEEeEEEECCEEeccCC----------CcEEE
Confidence 6899999985 234889999 455544 56666 567899999999999998876431 56899
Q ss_pred EeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEEEeCC
Q 044367 316 IDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFYQESS 395 (450)
Q Consensus 316 iDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~ 395 (450)
|||||++++||++++++|++++++... ..+.+.++|+. ...+|+|+|+|+ |.+++||+++|+.+ .
T Consensus 212 iDsGtt~~~lP~~~~~~i~~~~~~~~~------~~g~~~~~C~~------~~~~p~i~f~f~-g~~~~l~~~~y~~~--~ 276 (320)
T 4aa9_A 212 LDTGTSVLFGPSSDILKIQMAIGATEN------RYGEFDVNCGN------LRSMPTVVFEIN-GRDYPLSPSAYTSK--D 276 (320)
T ss_dssp ECTTCSSEEEEHHHHHHHHHHTTCEEC------TTSCEEECGGG------GGGCCCEEEEET-TEEEEECHHHHEEE--E
T ss_pred EECCCCcEECCHHHHHHHHHHhCCccc------CCCcEEEeCCC------CCcCceEEEEEC-CEEEEECHHHhccC--C
Confidence 999999999999999999999865421 12334689986 257899999998 99999999999976 3
Q ss_pred CeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 396 SVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 396 ~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
+..|+. +...... +.||||++|||++|+|||++++|||||+++
T Consensus 277 ~~~C~~~i~~~~~~-----~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 277 QGFCTSGFQGDNNS-----ELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp TTEEEESEEEETTC-----CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEEEcCCCC-----CcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 467985 6553321 459999999999999999999999999975
No 16
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=3.1e-54 Score=421.97 Aligned_cols=298 Identities=22% Similarity=0.391 Sum_probs=242.3
Q ss_pred CcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCC--CCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEe
Q 044367 95 TVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQ--CGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNI 171 (450)
Q Consensus 95 ~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~--C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~ 171 (450)
.+.+|+++|.||||+|++.|++||||+++||+|..|.. |.. +.|||++|+|++. ..|.|.+
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~----------------~~~~~~i 73 (329)
T 1htr_B 10 MDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYST----------------NGQTFSL 73 (329)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEE----------------EEEEEEE
T ss_pred cCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCCCcCCCccCCCeEE----------------CCcEEEE
Confidence 34899999999999999999999999999999999985 876 8999999999998 5789999
Q ss_pred eeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCC-CC-CCcceeeecCCCCCC---CCcHHhhh-------
Q 044367 172 RYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHF-SD-EQFTGVFGLGPATSS---THSLVEKV------- 239 (450)
Q Consensus 172 ~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~~-~~~~GIlGLg~~~~~---~~sl~~ql------- 239 (450)
.|++|+. .|.+++|+|+|++ +.++++.|||++...+. |. ...+||||||+...+ ..++++||
T Consensus 74 ~Yg~gs~-~G~~~~D~v~~g~-----~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~ 147 (329)
T 1htr_B 74 QYGSGSL-TGFFGYDTLTVQS-----IQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALT 147 (329)
T ss_dssp EETTEEE-EEEEEEEEEEETT-----EEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSS
T ss_pred EeCCCCe-EEEEEeeeEEEcc-----eEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCC
Confidence 9999986 9999999999998 89999999999987652 32 358999999998443 23455554
Q ss_pred cCceEEeecCCCCCCcccceEEecCCCcCc-----ceecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCCce
Q 044367 240 GSKFSYCIGNLNYFEYAYNMLILGEGAILE-----GDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAGV 314 (450)
Q Consensus 240 ~~~Fs~~l~~~~~~~~~~G~l~fG~~~d~~-----~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~~ 314 (450)
.++||+||.+.... ..|.|+||+ .|++ +.|+|+ ....+|.|.+++|+|+++.+.. . .. ...+
T Consensus 148 ~~~Fs~~L~~~~~~--~~G~l~fGg-~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~~~~~~~-----~-~~---~~~a 214 (329)
T 1htr_B 148 SPVFSVYLSNQQGS--SGGAVVFGG-VDSSLYTGQIYWAPV-TQELYWQIGIEEFLIGGQASGW-----C-SE---GCQA 214 (329)
T ss_dssp SSEEEEEECSSCSS--EEEEEEESS-CCGGGEEEEEEEEEB-CSSSSCEEEECEEEETTEECCT-----T-TT---CEEE
T ss_pred CCEEEEEEcCCCCC--CCcEEEEcc-cCHHHcCCceEEEEC-CCCceEEEEEeEEEECCceeee-----c-CC---CceE
Confidence 57999999886432 248999995 5544 456777 4578999999999999987541 1 11 5689
Q ss_pred EEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEEEeC
Q 044367 315 FIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFYQES 394 (450)
Q Consensus 315 iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~ 394 (450)
||||||++++||++++++|++++++... ..+.+.++|+. ...+|+|+|+|+ |.+++||+++|+++..
T Consensus 215 iiDSGTt~~~lp~~~~~~l~~~~~~~~~------~~g~~~~~C~~------~~~~P~i~f~f~-g~~~~i~~~~y~~~~~ 281 (329)
T 1htr_B 215 IVDTGTSLLTVPQQYMSALLQATGAQED------EYGQFLVNCNS------IQNLPSLTFIIN-GVEFPLPPSSYILSNN 281 (329)
T ss_dssp EECTTCCSEEEEGGGHHHHHHHHTCEEC------TTSCEEECGGG------GGGSCCEEEEET-TEEEEECHHHHEEECS
T ss_pred EEecCCccEECCHHHHHHHHHHhCCeec------CCCeEEEeCCC------cccCCcEEEEEC-CEEEEECHHHhcccCC
Confidence 9999999999999999999999865431 12334688986 257899999997 8999999999999876
Q ss_pred CCeEEEE-EEeCCCCCCCCCC-ceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 395 SSVFCLA-VGPSDINGERFKD-LSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 395 ~~~~C~~-~~~~~~~~~~~~~-~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
+ .|+. +...... ...++ .||||++|||++|+|||++++|||||+++
T Consensus 282 -g-~C~~~~~~~~~~-~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 282 -G-YCTVGVEPTYLS-SQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp -S-CEEESEEEECCC-CTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -C-EEEEEEEECCCC-CCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 4 8985 6554311 11124 69999999999999999999999999874
No 17
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.5e-54 Score=423.26 Aligned_cols=294 Identities=22% Similarity=0.377 Sum_probs=240.2
Q ss_pred cceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCC--CCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEee
Q 044367 96 VPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQ--CGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNIR 172 (450)
Q Consensus 96 ~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~--C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~~ 172 (450)
+.+|+++|.||||||++.|+|||||+++||+|..|.. |.. +.|||++|+|++. ..|.|.+.
T Consensus 11 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~----------------~~~~~~i~ 74 (324)
T 1am5_A 11 DTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQSSTYVE----------------TGKTVDLT 74 (324)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTSCCBCGGGCTTCEE----------------EEEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCCCcCCCccCCCeEe----------------CCcEEEEE
Confidence 4799999999999999999999999999999999984 876 8999999999998 57899999
Q ss_pred eCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCC-CC-CCcceeeecCCCCCC---CCcHHhhh-------c
Q 044367 173 YTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHF-SD-EQFTGVFGLGPATSS---THSLVEKV-------G 240 (450)
Q Consensus 173 Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~~-~~~~GIlGLg~~~~~---~~sl~~ql-------~ 240 (450)
|++|+. .|.+++|+|+|++ +.++++.|||++...+. |. ...+||||||++..+ ..++++|| .
T Consensus 75 Yg~Gs~-~G~~~~D~v~~g~-----~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~ 148 (324)
T 1am5_A 75 YGTGGM-RGILGQDTVSVGG-----GSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEK 148 (324)
T ss_dssp CSSCEE-EEEEEEEEEESSS-----SCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSS
T ss_pred ECCCCe-EEEEEECceeECC-----cEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCC
Confidence 999986 9999999999998 78999999999987652 32 358999999998432 12344444 5
Q ss_pred CceEEeecCCCCCCcccceEEecCCCc----CcceecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCCceEE
Q 044367 241 SKFSYCIGNLNYFEYAYNMLILGEGAI----LEGDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAGVFI 316 (450)
Q Consensus 241 ~~Fs~~l~~~~~~~~~~G~l~fG~~~d----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~~ii 316 (450)
++||+||.+... ..|.|+||+.+. .++.|+|+ ...++|.|.+++|+|+++.+... ...+||
T Consensus 149 ~~FS~~l~~~~~---~~G~l~fGg~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~~~~~~~~-----------~~~aii 213 (324)
T 1am5_A 149 DLFSFYLSGGGA---NGSEVMLGGVDNSHYTGSIHWIPV-TAEKYWQVALDGITVNGQTAACE-----------GCQAIV 213 (324)
T ss_dssp SEEEEECCSTTC---SCEEEEESSCCGGGBCSCCEEEEE-EEETTEEEEECEEEETTEECCCC-----------CEEEEE
T ss_pred CEEEEEecCCCC---CCcEEEECccCHHHcCCceEEEec-CCCcEEEEEEeEEEECCceeecc-----------CceEEE
Confidence 799999988632 248999995432 23567777 44689999999999999875321 357999
Q ss_pred eccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEEEeCCC
Q 044367 317 DSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFYQESSS 396 (450)
Q Consensus 317 DSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~ 396 (450)
||||++++||++++++|.+++++. . ..+.+.++|+. ...+|+|+|+|+ |.+++||+++|+++. +
T Consensus 214 DSGTt~~~lp~~~~~~l~~~~~~~-~------~~g~~~~~C~~------~~~~P~i~f~f~-g~~~~i~~~~y~~~~--~ 277 (324)
T 1am5_A 214 DTGTSKIVAPVSALANIMKDIGAS-E------NQGEMMGNCAS------VQSLPDITFTIN-GVKQPLPPSAYIEGD--Q 277 (324)
T ss_dssp CTTCSSEEECTTTHHHHHHHHTCE-E------CCCCEECCTTS------SSSSCCEEEEET-TEEEEECHHHHEEES--S
T ss_pred ecCCccEECCHHHHHHHHHHhCCc-c------cCCcEEEeCCC------cccCCcEEEEEC-CEEEEECHHHhcccC--C
Confidence 999999999999999999998654 1 12234689986 257899999997 899999999999986 5
Q ss_pred eEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 397 VFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 397 ~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
..|+. +...... ...++.||||++|||++|+|||++++|||||+++
T Consensus 278 ~~C~~~~~~~~~~-~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 278 AFCTSGLGSSGVP-SNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp SCEEECEEECCSC-CSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred CeEEEEEEECccC-CCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 67985 6554321 1112479999999999999999999999999974
No 18
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.1e-54 Score=427.61 Aligned_cols=293 Identities=20% Similarity=0.284 Sum_probs=238.5
Q ss_pred cceEEEEEEECCCCceEEEEEECCCCceeEeCCC--CC---------CCCC-CCCCCCCCCcceeecCCCCCCCCCCCCC
Q 044367 96 VPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQP--CE---------QCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGY 163 (450)
Q Consensus 96 ~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~--C~---------~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~ 163 (450)
+.+|+++|.||||||++.|++||||+++||++.. |. .|.. +.|||++|+|++.
T Consensus 11 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~--------------- 75 (342)
T 3pvk_A 11 QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQD--------------- 75 (342)
T ss_dssp SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEE---------------
T ss_pred CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceee---------------
Confidence 3899999999999999999999999999998654 63 4765 8999999999998
Q ss_pred CCCceeEeeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCCCCCCcceeeecCCCCCC----CCcHHhhh
Q 044367 164 PDECWYNIRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHFSDEQFTGVFGLGPATSS----THSLVEKV 239 (450)
Q Consensus 164 ~~~~~~~~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GIlGLg~~~~~----~~sl~~ql 239 (450)
..|.|.+.|++|+.+.|.+++|+|+|++ +.++++.|||++... ..+||||||++... ..+++.||
T Consensus 76 -~~~~~~i~Yg~gs~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~-----~~~GilGLg~~~~~~~~~~~~~~~~L 144 (342)
T 3pvk_A 76 -LNTPFKIGYGDGSSSQGTLYKDTVGFGG-----VSIKNQVLADVDSTS-----IDQGILGVGYKTNEAGGSYDNVPVTL 144 (342)
T ss_dssp -EEEEEEEECSSSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEES-----SSSCEEECSCGGGCSSCSSCCHHHHH
T ss_pred -cCCeEEEEecCCCeEEEEEEEEEEEECC-----EEecceEEEEEEccC-----CCccEEEecCccccccccCCcHHHHH
Confidence 4789999999999789999999999998 899999999998865 48999999998432 24677776
Q ss_pred -------cCceEEeecCCCCCCcccceEEecCCCcCc-----ceecccccCCCceEEEEeeEEECCEEeecCCcccccCC
Q 044367 240 -------GSKFSYCIGNLNYFEYAYNMLILGEGAILE-----GDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKND 307 (450)
Q Consensus 240 -------~~~Fs~~l~~~~~~~~~~G~l~fG~~~d~~-----~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~ 307 (450)
.++||+||.+... ..|.|+||+ .|++ +.|+|+ ....+|.|.+++|+|+++.+..+
T Consensus 145 ~~qg~i~~~~fs~~l~~~~~---~~G~l~fGg-~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~g~~~~~~-------- 211 (342)
T 3pvk_A 145 KKQGVIAKNAYSLYLNSPDA---ATGQIIFGG-VDNAKYSGSLIALPV-TSDRELRISLGSVEVSGKTINTD-------- 211 (342)
T ss_dssp HHTTSSSSSEEEEECCCTTC---SEEEEEETE-EETTSBSSCCEEEEC-CCSSSCEEEEEEEEETTEEEEEE--------
T ss_pred HhcCCCCCceEEEEeCCCCC---CCcEEEECc-cCccceeeeeEEeec-CccceEEEEEeEEEECCEEecCC--------
Confidence 4689999987542 348899995 4443 457777 44569999999999999988653
Q ss_pred CcCCCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCC
Q 044367 308 TWSDAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAE 387 (450)
Q Consensus 308 ~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~ 387 (450)
...+||||||++++||++++++|++++++..... ......+.++|+. .|.|+|+|++|.+++||++
T Consensus 212 ---~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~--~~~~~~~~~~C~~---------~p~i~f~f~~g~~~~vp~~ 277 (342)
T 3pvk_A 212 ---NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD--SNGNSFYEVDCNL---------SGDVVFNFSKNAKISVPAS 277 (342)
T ss_dssp ---EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC--TTSCEEEEECSCC---------CSEEEEEESTTCEEEEEGG
T ss_pred ---CceEEEeCCCCCeecCHHHHHHHHHHcCCeeccc--CCCceEEEEecCC---------CCceEEEECCCCEEEEcHH
Confidence 4679999999999999999999999997765321 1111124689963 4999999987899999999
Q ss_pred ceEEEeC--CC---eEEEEEEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCCCCCcc
Q 044367 388 SVFYQES--SS---VFCLAVGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRIDCELLA 448 (450)
Q Consensus 388 ~y~~~~~--~~---~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~ 448 (450)
+|+++.. ++ ..|+..+... +.||||++|||++|+|||++++|||||+++|++.+
T Consensus 278 ~~~~~~~~~~g~~~~~C~~~i~~~-------~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s 336 (342)
T 3pvk_A 278 EFAASLQGDDGQPYDKCQLLFDVN-------DANILGDNFLRSAYIVYDLDDNEISLAQVKYTSAS 336 (342)
T ss_dssp GGEEC----------CEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCC
T ss_pred HheeeccccCCCcCCeeEEEEeeC-------CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCCC
Confidence 9998732 22 6798644433 24999999999999999999999999999998643
No 19
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2.1e-53 Score=433.50 Aligned_cols=307 Identities=20% Similarity=0.317 Sum_probs=239.0
Q ss_pred CcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCC---CCCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeE
Q 044367 95 TVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCE---QCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYN 170 (450)
Q Consensus 95 ~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~---~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~ 170 (450)
.+.+|+++|.||||||++.|+|||||+++||+|..|. .|.. +.|||++|+||+. .+|.|.
T Consensus 50 ~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~----------------~~~~~~ 113 (478)
T 1qdm_A 50 MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKK----------------NGKPAA 113 (478)
T ss_dssp GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBC----------------CCCEEE
T ss_pred cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCCCCCCcccCCCeee----------------CCcEEE
Confidence 3479999999999999999999999999999999996 4876 8999999999988 678999
Q ss_pred eeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCC-C-CCCcceeeecCCCCCCC---C----cHHhh--h
Q 044367 171 IRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHF-S-DEQFTGVFGLGPATSST---H----SLVEK--V 239 (450)
Q Consensus 171 ~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GIlGLg~~~~~~---~----sl~~q--l 239 (450)
+.|++|+ ++|.+++|+|+|++ +.++++.|||++...+. | ...++||||||++..+. . ++++| +
T Consensus 114 i~Yg~Gs-~~G~~~~Dtv~ig~-----~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i 187 (478)
T 1qdm_A 114 IQYGTGS-IAGYFSEDSVTVGD-----LVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLV 187 (478)
T ss_dssp EEETTEE-EEEEEEEEEEEETT-----EEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCC
T ss_pred EEcCCCC-eEEEEEEEEEEECC-----eEECCEEEEEEEecCCcccccccccceecccccccccCCCCcHHHHHHHCCCC
Confidence 9999998 69999999999998 89999999999987652 2 23579999999984321 1 23444 2
Q ss_pred -cCceEEeecCCCCCCcccceEEecCCCcCc-----ceecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCCc
Q 044367 240 -GSKFSYCIGNLNYFEYAYNMLILGEGAILE-----GDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAG 313 (450)
Q Consensus 240 -~~~Fs~~l~~~~~~~~~~G~l~fG~~~d~~-----~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~ 313 (450)
.++||+||.+.... ...|.|+||+ .|++ +.|+|+ ...++|+|.+++|+|+++.+.+.. . ...
T Consensus 188 ~~~~FS~~L~~~~~~-~~~G~l~fGg-~d~~~~~G~l~~~pv-~~~~~w~v~l~~i~v~g~~~~~~~------~---~~~ 255 (478)
T 1qdm_A 188 SDPVFSFWLNRHVDE-GEGGEIIFGG-MDPKHYVGEHTYVPV-TQKGYWQFDMGDVLVGGKSTGFCA------G---GCA 255 (478)
T ss_dssp SSSEEEEECCCC------CEEEEETC-CCTTSEEEEEEEEEE-EEETTEEEEECCEEETTEECSTTT------T---CEE
T ss_pred CCCEEEEEeecCCCC-CCCeEEEeCC-cCHhhcCCCceEEec-cCCCeEEEEEeEEEECCEEEeecC------C---Cce
Confidence 57999999885321 2348999995 5554 356777 456899999999999998865421 1 578
Q ss_pred eEEeccCceeecchHHHHHHHHHHHHHH----------------------hc----------------------------
Q 044367 314 VFIDSGTTLTWLVPSAYQTLRKEVEDLF----------------------QG---------------------------- 343 (450)
Q Consensus 314 ~iiDSGTt~~~lp~~~~~~l~~~~~~~~----------------------~~---------------------------- 343 (450)
+||||||+++++|.+++++|.+++++.. ..
T Consensus 256 aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v 335 (478)
T 1qdm_A 256 AIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSV 335 (478)
T ss_dssp EEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC---------------
T ss_pred EEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcccccccccccc
Confidence 9999999999999999999999885421 00
Q ss_pred ----------------------------------------------cCCC--CCCCCCccccccCccCCcccCCCeEEEE
Q 044367 344 ----------------------------------------------LLPS--YPMDPAWHLCYSGNINRDLQGFPAMAFH 375 (450)
Q Consensus 344 ----------------------------------------------~~~~--~~~~~~~~~C~~~~~~~~~~~~P~i~f~ 375 (450)
.+.. ...+.+.++|.. ...+|+|+|+
T Consensus 336 ~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~------~~~lP~i~f~ 409 (478)
T 1qdm_A 336 VDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGS------LGSMPDIEFT 409 (478)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGG------GTTCCCEEEE
T ss_pred ccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeeccc------ccccccEEEE
Confidence 0000 011223567764 3579999999
Q ss_pred ecCCCEEEeCCCceEEEeCC--CeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 376 FAGGADLVLDAESVFYQESS--SVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 376 f~gg~~~~l~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
|+ |++|+|+|++|++.... ...|++ +..... ....++.||||+.|||++|+|||++++|||||++.
T Consensus 410 ~g-g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~-~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 410 IG-GKKFALKPEEYILKVGEGAAAQCISGFTAMDI-PPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp ET-TEEEEECHHHHEEECSCGGGCCEEESEEECCC-CTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EC-CEEEEEChHHhEEEccCCCCCeEEEEEEeccC-CCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 98 89999999999998764 458987 544321 11112579999999999999999999999999863
No 20
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=4.7e-54 Score=423.00 Aligned_cols=298 Identities=20% Similarity=0.350 Sum_probs=240.9
Q ss_pred cceEEEEEEECCCCceEEEEEECCCCceeEeCCCCC----CCCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeE
Q 044367 96 VPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCE----QCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYN 170 (450)
Q Consensus 96 ~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~----~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~ 170 (450)
+.+|+++|.||||||+++|++||||+++||+|..|. .|.. +.|||++|+|++. ..|.|.
T Consensus 17 d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~----------------~~~~~~ 80 (341)
T 3k1w_A 17 DTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKH----------------NGTELT 80 (341)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEE----------------EEEEEE
T ss_pred CCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeE----------------CCCEEE
Confidence 479999999999999999999999999999999998 4766 8999999999998 688999
Q ss_pred eeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCC-C-CCCcceeeecCCCCCC---CCcHHhhh------
Q 044367 171 IRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHF-S-DEQFTGVFGLGPATSS---THSLVEKV------ 239 (450)
Q Consensus 171 ~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GIlGLg~~~~~---~~sl~~ql------ 239 (450)
+.|++|+ +.|.+++|+|+|++ ..+ ++.|||++...+. + ....+||||||++..+ ..+++++|
T Consensus 81 i~Yg~gs-~~G~~~~D~v~ig~-----~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i 153 (341)
T 3k1w_A 81 LRYSTGT-VSGFLSQDIITVGG-----ITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVL 153 (341)
T ss_dssp EEETTEE-EEEEEEEEEEEETT-----EEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCB
T ss_pred EEECCcE-EEEEEEEEEEEECC-----cee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCC
Confidence 9999998 69999999999998 788 9999999987753 2 2358999999998432 12344443
Q ss_pred -cCceEEeecCCCCC-CcccceEEecCCCcCcc-----eecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCC
Q 044367 240 -GSKFSYCIGNLNYF-EYAYNMLILGEGAILEG-----DSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDA 312 (450)
Q Consensus 240 -~~~Fs~~l~~~~~~-~~~~G~l~fG~~~d~~~-----~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~ 312 (450)
.++||+||.+.... ....|.|+||+ .|+++ .|+|+ ....+|.|.+++|+|+++.+.... ..
T Consensus 154 ~~~~Fs~~l~~~~~~~~~~~G~l~fGg-~d~~~~~g~l~~~p~-~~~~~w~v~l~~i~v~~~~~~~~~----------~~ 221 (341)
T 3k1w_A 154 KEDVFSFYYNRDSENSQSLGGQIVLGG-SDPQHYEGNFHYINL-IKTGVWQIQMKGVSVGSSTLLCED----------GC 221 (341)
T ss_dssp SSSEEEEEECCCC-----CCEEEEESS-CCGGGEEEEEEEEEC-SSTTSCEEEECCEEETTEEEECTT----------CE
T ss_pred CCCEEEEEEeCCCCcCCCCCCEEEECc-cChHHccCceEEEec-CCCCEEEEEEeEEEECCEEeecCC----------CC
Confidence 57999999986421 12248999994 55544 56666 467899999999999998754321 56
Q ss_pred ceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEEE
Q 044367 313 GVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFYQ 392 (450)
Q Consensus 313 ~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~ 392 (450)
.+||||||++++||++++++|++++++... ..+ +.++|.. ...+|+|+|+|+ |.+++||+++|+++
T Consensus 222 ~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~------~~g-~~~~C~~------~~~~p~i~f~f~-g~~~~l~~~~~~~~ 287 (341)
T 3k1w_A 222 LALVDTGASYISGSTSSIEKLMEALGAKKR------LFD-YVVKCNE------GPTLPDISFHLG-GKEYTLTSADYVFQ 287 (341)
T ss_dssp EEEECTTCSSEEECHHHHHHHHHHHTCEEC------SSC-EEEEGGG------GGGCCCEEEEET-TEEEEECHHHHBCC
T ss_pred EEEEECCCChhcCCHHHHHHHHHHcCCeec------CCC-eEEeCCC------CCcCCcEEEEEC-CEEEEECHHHheeE
Confidence 899999999999999999999999966532 112 5688985 257899999998 99999999999987
Q ss_pred eCC--CeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 393 ESS--SVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 393 ~~~--~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
... +..|+. +...... ....+.||||++|||++|+|||++++|||||+++
T Consensus 288 ~~~~~~~~C~~~i~~~~~~-~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 288 ESYSSKKLCTLAIHAMDIP-PPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp SCCCTTSEEEBSEEECCCC-TTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccCCCCCeEEeEEEecccC-CCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 543 578985 5553211 1112469999999999999999999999999986
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=8.9e-54 Score=424.94 Aligned_cols=289 Identities=20% Similarity=0.324 Sum_probs=239.2
Q ss_pred CcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCC--CCCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEe
Q 044367 95 TVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCE--QCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNI 171 (450)
Q Consensus 95 ~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~--~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~ 171 (450)
.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.. +.|||++|+|++. .+|.|.+
T Consensus 60 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~----------------~~~~~~i 123 (375)
T 1miq_A 60 ANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEK----------------DGTKVDI 123 (375)
T ss_dssp BCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEE----------------EEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEE----------------CCcEEEE
Confidence 3489999999999999999999999999999999997 4876 8999999999998 5789999
Q ss_pred eeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEec----CCCCC-CCCcceeeecCCCCCC---CCcHHhhh----
Q 044367 172 RYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHN----NAHFS-DEQFTGVFGLGPATSS---THSLVEKV---- 239 (450)
Q Consensus 172 ~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~----~~~~~-~~~~~GIlGLg~~~~~---~~sl~~ql---- 239 (450)
.|++|+ +.|.+++|+|+|++ +.+++ .|||++. .. .| ....+||||||++..+ ..+++++|
T Consensus 124 ~Yg~Gs-~~G~~~~Dtv~ig~-----~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg 195 (375)
T 1miq_A 124 TYGSGT-VKGFFSKDLVTLGH-----LSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQN 195 (375)
T ss_dssp EETTEE-EEEEEEEEEEEETT-----EEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTT
T ss_pred EeCCCe-EEEEEEEEEEEEcC-----ceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCCHHHHHHhcc
Confidence 999999 69999999999998 89999 9999998 54 33 2358999999998543 23444444
Q ss_pred ---cCceEEeecCCCCCCcccceEEecCCCcCc-----ceecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCC
Q 044367 240 ---GSKFSYCIGNLNYFEYAYNMLILGEGAILE-----GDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSD 311 (450)
Q Consensus 240 ---~~~Fs~~l~~~~~~~~~~G~l~fG~~~d~~-----~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~ 311 (450)
.++||+||.+... ..|.|+||+ .|++ +.|+|+ ...++|.|.++ |+|+++.+ . .
T Consensus 196 ~i~~~~FS~~L~~~~~---~~G~l~fGg-~d~~~~~g~l~~~p~-~~~~~w~v~l~-i~v~g~~~--~-----------~ 256 (375)
T 1miq_A 196 KIDNALFTFYLPVHDV---HAGYLTIGG-IEEKFYEGNITYEKL-NHDLYWQIDLD-VHFGKQTM--E-----------K 256 (375)
T ss_dssp SSSSSEEEEECCTTCT---TEEEEEESS-CCGGGEEEEEEEEEB-SSSSSSEEEEE-EEETTEEE--E-----------E
T ss_pred CcCCCEEEEEecCCCC---CCeEEEEcc-cCHHHcCCceEEEec-CCCceEEEEEE-EEECCEEc--c-----------c
Confidence 5799999998632 348999995 5544 456777 45789999999 99999876 1 5
Q ss_pred CceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEE
Q 044367 312 AGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFY 391 (450)
Q Consensus 312 ~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~ 391 (450)
..+||||||++++||.+++++|++++++... ...+.+.++|+. ..+|+|+|+|+ |.+++||+++|++
T Consensus 257 ~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~~~g~~~~~C~~-------~~~P~i~f~f~-g~~~~l~~~~yi~ 323 (375)
T 1miq_A 257 ANVIVDSGTTTITAPSEFLNKFFANLNVIKV-----PFLPFYVTTCDN-------KEMPTLEFKSA-NNTYTLEPEYYMN 323 (375)
T ss_dssp EEEEECTTBSSEEECHHHHHHHHHHHTCEEC-----TTSSCEEEETTC-------TTCCCEEEECS-SCEEEECGGGSEE
T ss_pred ceEEecCCCccEEcCHHHHHHHHHHhCCccc-----CCCCeEEEECCC-------CCCCcEEEEEC-CEEEEECHHHhEe
Confidence 6899999999999999999999999966431 112334689975 46899999997 9999999999999
Q ss_pred EeCC--CeEEE-EEEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 392 QESS--SVFCL-AVGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 392 ~~~~--~~~C~-~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
+... ...|+ +++..... .+.||||++|||++|+|||++++|||||+++
T Consensus 324 ~~~~~g~~~C~~~~~~~~~~----~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 324 PILEVDDTLCMITMLPVDID----SNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp ESSSSSCSEEEESEEECCSS----SSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred eccCCCCCeEEEEEEECCCC----CCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 8753 45898 56655421 1369999999999999999999999999874
No 22
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.4e-52 Score=427.41 Aligned_cols=315 Identities=18% Similarity=0.278 Sum_probs=243.9
Q ss_pred ceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCCCCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEeeeCC
Q 044367 97 PVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNIRYTN 175 (450)
Q Consensus 97 ~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~~Yg~ 175 (450)
..|+++|.||||+|+++|+|||||+++||+|.+| |.. +.|||++|+||+. ..|.|.+.|++
T Consensus 74 ~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~~~~y~~~~SsT~~~----------------~~~~~~i~Yg~ 135 (455)
T 3lpj_A 74 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLHRYYQRQLSSTYRD----------------LRKGVYVPYTQ 135 (455)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCSCCCCGGGCTTCEE----------------EEEEEEEECSS
T ss_pred CEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cccCCcccCCCCCCccc----------------CCccEEEEeCC
Confidence 6899999999999999999999999999999998 655 8999999999998 57899999999
Q ss_pred CCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCCCC--CCcceeeecCCCCCC-----CCcHHhhh------cCc
Q 044367 176 GPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHFSD--EQFTGVFGLGPATSS-----THSLVEKV------GSK 242 (450)
Q Consensus 176 gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~--~~~~GIlGLg~~~~~-----~~sl~~ql------~~~ 242 (450)
|+. .|.+++|+|+|++.. ...+ .+.|+++....+.|. ...+||||||++..+ ..+++++| .++
T Consensus 136 Gs~-~G~~~~Dtv~ig~~~--~~~~-~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~ 211 (455)
T 3lpj_A 136 GKW-EGELGTDLVSIPHGP--NVTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNL 211 (455)
T ss_dssp CEE-EEEEEEEEEECTTSC--SCEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSC
T ss_pred eEE-EEEEEEEEEEECCCc--ceee-EEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCCce
Confidence 996 999999999998521 0222 467888887666553 358999999998443 23455554 469
Q ss_pred eEEeecCCCCC-------CcccceEEecCCCcCcc-----eecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcC
Q 044367 243 FSYCIGNLNYF-------EYAYNMLILGEGAILEG-----DSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWS 310 (450)
Q Consensus 243 Fs~~l~~~~~~-------~~~~G~l~fG~~~d~~~-----~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~ 310 (450)
||+||.+.... ....|.|+|| ++|+++ .|+|+ ....+|.|.+++|+|+++.+.++...+.
T Consensus 212 FS~~L~~~~~~~~~~~~~~~~~G~l~fG-g~d~~~~~g~l~~~p~-~~~~~w~v~l~~i~v~g~~~~~~~~~~~------ 283 (455)
T 3lpj_A 212 FSLQLCGAGFPLNQSEVLASVGGSMIIG-GIDHSLYTGSLWYTPI-RREWYYEVIIVRVEINGQDLKMDCKEYN------ 283 (455)
T ss_dssp EEEEECCCSSCCCHHHHHHSCCEEEEET-SCCGGGEEEEEEEEEC-CSBTTBBCCEEEEEETTEECCCCGGGGG------
T ss_pred eEEEeccccccccccccccCCCceEEEC-CcCcccccCceEEEec-CCCceeEEEEeEEEECCEEccccccccC------
Confidence 99999763110 1235899999 555554 46666 4568999999999999999876544332
Q ss_pred CCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCC---CCCccccccCccCCcccCCCeEEEEecCCC-----EE
Q 044367 311 DAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPM---DPAWHLCYSGNINRDLQGFPAMAFHFAGGA-----DL 382 (450)
Q Consensus 311 ~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~-----~~ 382 (450)
...+||||||++++||++++++|++++++.... ..... ..+.++|+..... ....+|+|+|+|+|+. +|
T Consensus 284 ~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~--~~~~~~~~~g~~~~C~~~~~~-~~~~~P~i~f~f~g~~~~~~~~~ 360 (455)
T 3lpj_A 284 YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST--EKFPDGFWLGEQLVCWQAGTT-PWNIFPVISLYLMGEVTNQSFRI 360 (455)
T ss_dssp SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTT--SCCCHHHHTTCSCEEESTTCC-CGGGSCCEEEEEECSSTTEEEEE
T ss_pred CCeEEEECCCcceeCCHHHHHHHHHHhhhhccc--cccCcccccCcceecccccCC-chhcCCcEEEEEcCCCcCceEEE
Confidence 467999999999999999999999999998631 11221 1125899874321 1245999999999443 59
Q ss_pred EeCCCceEEEeCCC----eEEEEEEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCCCCCccC
Q 044367 383 VLDAESVFYQESSS----VFCLAVGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRIDCELLAD 449 (450)
Q Consensus 383 ~l~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~~ 449 (450)
+|++++|+++..+. ..|+++...... +.||||++|||++|+|||++++|||||+++|+..++
T Consensus 361 ~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~-----~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~ 426 (455)
T 3lpj_A 361 TILPQQYLRPVEDVATSQDDCYKFAISQSS-----TGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDE 426 (455)
T ss_dssp EECHHHHEEEECCTTCCSCEEEEECEEEES-----SCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCS
T ss_pred EECHHHheEeccCCCCCCceEEEEeccCCC-----CcEEEChHHhCCeEEEEECCCCEEEEEecccccccc
Confidence 99999999987642 589873222111 359999999999999999999999999999987653
No 23
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=5.4e-53 Score=412.23 Aligned_cols=298 Identities=17% Similarity=0.209 Sum_probs=238.1
Q ss_pred cccccCCCCcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCCC--CC-CCCCCCCCCcceeecCCCCCCCCCCCCC
Q 044367 87 AHLHPGISTVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQC--GA-TTFDPSKSLTYATLPCDSSYCTNDCGGY 163 (450)
Q Consensus 87 ~~~~~~~~~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~C--~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~ 163 (450)
+++.+...+ .+|+++|.|| +|++.|+|||||+++||+|.+|..| .. +.|||++|+ ++.
T Consensus 5 v~~~~~~~~-~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~--------------- 65 (325)
T 1ibq_A 5 AVTTPQNND-EEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKL--------------- 65 (325)
T ss_dssp EEEEECTTT-SCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EEC---------------
T ss_pred EEeEEcCCC-CEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-Ccc---------------
Confidence 444454444 8999999999 8999999999999999999999885 44 899999999 554
Q ss_pred CCCceeEeeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCCCC--CCcceeeecCCCCCC------CCcH
Q 044367 164 PDECWYNIRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHFSD--EQFTGVFGLGPATSS------THSL 235 (450)
Q Consensus 164 ~~~~~~~~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~--~~~~GIlGLg~~~~~------~~sl 235 (450)
+.|.|.+.|++|+.+.|.+++|+|+|++ +.++++.|||++...+.+. ...+||||||++..+ ..++
T Consensus 66 -~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~ 139 (325)
T 1ibq_A 66 -SGYSWDISYGDGSSASGDVYRDTVTVGG-----VTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTF 139 (325)
T ss_dssp -TTCBEEEECSSSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCH
T ss_pred -CCCEEEEEeCCCCEEEEEEEEeEEEECC-----EEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCH
Confidence 6789999999999779999999999998 8999999999998764332 258999999998432 2235
Q ss_pred Hhhh-----cCceEEeecCCCCCCcccceEEecCCCc----CcceecccccCCCceEEEEeeEEECCEEeecCCcccccC
Q 044367 236 VEKV-----GSKFSYCIGNLNYFEYAYNMLILGEGAI----LEGDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKN 306 (450)
Q Consensus 236 ~~ql-----~~~Fs~~l~~~~~~~~~~G~l~fG~~~d----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~ 306 (450)
++|| .++||+||.+. ..|.|+||+.+. .++.|+|+....++|+|++++|+|+++.+...
T Consensus 140 ~~~l~~~i~~~~FS~~l~~~-----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~------- 207 (325)
T 1ibq_A 140 FDTVKSQLDSPLFAVQLKHD-----APGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSSSS------- 207 (325)
T ss_dssp HHHHGGGSSSSEEEEEEETT-----EEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCBSC-------
T ss_pred HHHHHHhcCCcEEEEEecCC-----CCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeeccCC-------
Confidence 5554 67999999863 248999995432 23567787546789999999999999865311
Q ss_pred CCcCCCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCC
Q 044367 307 DTWSDAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDA 386 (450)
Q Consensus 307 ~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~ 386 (450)
...+||||||++++||++++++|++++.+... ....+.+.++|+ ..+|+|+|+|+ |++++||+
T Consensus 208 ----~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~----~~~~g~~~~~C~--------~~~P~i~f~fg-g~~~~i~~ 270 (325)
T 1ibq_A 208 ----GFSAIADTGTTLILLDDEIVSAYYEQVSGAQE----SYEAGGYVFSCS--------TDLPDFTVVIG-DYKAVVPG 270 (325)
T ss_dssp ----CEEEEECTTCCSEEECHHHHHHHHTTSTTCBC----CSSSSSCEEETT--------CCCCCEEEEET-TEEEEECH
T ss_pred ----CceEEEeCCCCcEeCCHHHHHHHHHhCCCceE----cCcCCeEEEEcC--------CCCCcEEEEEC-CEEEEECH
Confidence 56899999999999999999999998843321 111233457897 36899999997 99999999
Q ss_pred CceEEEeCC--CeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 387 ESVFYQESS--SVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 387 ~~y~~~~~~--~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
++|++...+ ...|++ +...... +.||||++|||++|+|||++++|||||+++
T Consensus 271 ~~~~~~~~~~~~~~C~~~i~~~~~~-----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 271 KYINYAPVSTGSSTCYGGIQSNSGL-----GLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp HHHEEEESSTTCSEEEESEEECTTT-----CSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHhcccccCCCCCeEEEEEEcCCCC-----CceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 999987643 378997 5444321 469999999999999999999999999864
No 24
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=3e-53 Score=413.56 Aligned_cols=296 Identities=15% Similarity=0.185 Sum_probs=236.6
Q ss_pred cccccCCCCcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCCC--CC-CCCCCCCCCcceeecCCCCCCCCCCCCC
Q 044367 87 AHLHPGISTVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQC--GA-TTFDPSKSLTYATLPCDSSYCTNDCGGY 163 (450)
Q Consensus 87 ~~~~~~~~~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~C--~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~ 163 (450)
+...+... +.+|+++|.|| ||++.|+|||||+++||+|..|..| .. +.|||++|+ ++.
T Consensus 6 v~~~~~~~-~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~--------------- 66 (323)
T 1izd_A 6 VTTNPTSN-DEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKI--------------- 66 (323)
T ss_dssp EEEEECGG-GCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEE---------------
T ss_pred eeeeEcCC-CCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-Ccc---------------
Confidence 34444433 38999999999 7999999999999999999999874 44 899999999 654
Q ss_pred CCCceeEeeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCCCC--CCcceeeecCCCCCC------CCcH
Q 044367 164 PDECWYNIRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHFSD--EQFTGVFGLGPATSS------THSL 235 (450)
Q Consensus 164 ~~~~~~~~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~--~~~~GIlGLg~~~~~------~~sl 235 (450)
+.|.|.+.|++|+.++|.+++|+|+|++ +.++++.|||++...+.+. ...+||||||++..+ ..++
T Consensus 67 -~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~ 140 (323)
T 1izd_A 67 -DGATWSISYGDGSSASGDVYKDKVTVGG-----VSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTF 140 (323)
T ss_dssp -EEEEEEEECTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCH
T ss_pred -CCCeEEEEcCCCCeEEEEEEEEEEEECC-----EEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCH
Confidence 5789999999999779999999999998 8999999999998765332 258999999998432 2234
Q ss_pred Hhh----h-cCceEEeecCCCCCCcccceEEecCCCcCc-----ceecccccCCCceEEEEeeEEECCEEeecCCccccc
Q 044367 236 VEK----V-GSKFSYCIGNLNYFEYAYNMLILGEGAILE-----GDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKK 305 (450)
Q Consensus 236 ~~q----l-~~~Fs~~l~~~~~~~~~~G~l~fG~~~d~~-----~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~ 305 (450)
++| + .++||+||.+. ..|+|+||+ .|++ +.|+|+....++|.|.+++|+|++ .+...
T Consensus 141 ~~~l~~~i~~~~FS~~L~~~-----~~G~l~fGg-~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~~~------ 207 (323)
T 1izd_A 141 FDNVKSSLSEPIFAVALKHN-----APGVYDFGY-TDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSSSD------ 207 (323)
T ss_dssp HHHHGGGSSSSEEEEECCTT-----SCEEEEESS-CCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEECC------
T ss_pred HHHHHHhccCcEEEEEccCC-----CCCEEEECC-cCccccccceEEEECCCCCceEEEEECeEEECC-cccCC------
Confidence 444 4 58999999863 248999995 5544 457777546789999999999999 54311
Q ss_pred CCCcCCCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeC
Q 044367 306 NDTWSDAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLD 385 (450)
Q Consensus 306 ~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~ 385 (450)
...+||||||++++||++++++|.+++.+.... ...+.+.++|+ ..+|+|+|+|+ |++++||
T Consensus 208 -----~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~~----~~~g~~~~~C~--------~~~P~i~f~fg-g~~~~i~ 269 (323)
T 1izd_A 208 -----SITGIADTGTTLLLLDDSIVDAYYEQVNGASYD----SSQGGYVFPSS--------ASLPDFSVTIG-DYTATVP 269 (323)
T ss_dssp -----CEEEEECTTCCSEEECHHHHHHHHTTSTTCEEE----TTTTEEEEETT--------CCCCCEEEEET-TEEEEEC
T ss_pred -----CceEEEeCCCcceeCCHHHHHHHHHhCCCcEEc----CcCCEEEEECC--------CCCceEEEEEC-CEEEecC
Confidence 568999999999999999999999988432210 01123357897 36899999996 9999999
Q ss_pred CCceEEEeCCCeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 386 AESVFYQESSSVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 386 ~~~y~~~~~~~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
+++|++...++..|++ +...... +.||||++|||++|+|||++++|||||++.
T Consensus 270 ~~~~~~~~~~~~~C~~~i~~~~~~-----~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 270 GEYISFADVGNGQTFGGIQSNSGI-----GFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp HHHHEEEECSTTEEEESEEECTTT-----SSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHHeEEecCCCCeEEEEEEcCCCC-----CcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 9999988655678997 5554321 469999999999999999999999999863
No 25
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=3.6e-52 Score=415.05 Aligned_cols=321 Identities=20% Similarity=0.380 Sum_probs=238.5
Q ss_pred ccccCCCCcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCCCCCcceeecCCCCCCC-------CCC
Q 044367 88 HLHPGISTVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQCGATTFDPSKSLTYATLPCDSSYCT-------NDC 160 (450)
Q Consensus 88 ~~~~~~~~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~C~~~~y~p~~SsT~~~~~c~~~~C~-------~~c 160 (450)
++..+..+ .+|+++|.|||| |+|||||+++||+|.+|. +++.+.|.++.|. ..|
T Consensus 6 pv~~~~~~-~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~-------------~~~~~~C~s~~C~~~~~~~~~sc 66 (381)
T 1t6e_X 6 PVTKDPAT-SLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ-------------PPAEIPCSSPTCLLANAYPAPGC 66 (381)
T ss_dssp EEEECTTT-CCEEEEEETTEE-----EEEETTCCCEEECCCTTC-------------CCCCCBTTSHHHHHHHSSCCTTC
T ss_pred eEEecCCC-cEEEEEEeCCCE-----EEEECCCCceEEeCCCCC-------------CCCccCCCCchhccccCCCCCCC
Confidence 34444444 899999999998 999999999999997652 2334455554443 123
Q ss_pred CC-------CCCCc-eeEeeeCCCCccceeEEEEEEEeecCCCCceeeeeE----EEEeEecC--CCCCCCCcceeeecC
Q 044367 161 GG-------YPDEC-WYNIRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDV----GFGCSHNN--AHFSDEQFTGVFGLG 226 (450)
Q Consensus 161 ~~-------~~~~~-~~~~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~----~fg~~~~~--~~~~~~~~~GIlGLg 226 (450)
.. .+..| .|.+.|++|+.++|.+++|+|+|++.++ ...++++ .|||+..+ .+. ....+||||||
T Consensus 67 ~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g-~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg 144 (381)
T 1t6e_X 67 PAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDG-SKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLA 144 (381)
T ss_dssp CCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESS-SSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECS
T ss_pred CCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCC-CccccceeeeeEeecCcccccCCC-CCCCceEEEeC
Confidence 31 12456 5999999999889999999999986321 1456665 56999876 333 34699999999
Q ss_pred CCCCCCCcHHhhh------cCceEEeecCCCCCCcccceEEecCCCc------CcceecccccC--CCceEEEEeeEEEC
Q 044367 227 PATSSTHSLVEKV------GSKFSYCIGNLNYFEYAYNMLILGEGAI------LEGDSTPMSVI--DGSYYVTLEGISLG 292 (450)
Q Consensus 227 ~~~~~~~sl~~ql------~~~Fs~~l~~~~~~~~~~G~l~fG~~~d------~~~~~~pl~~~--~~~~~v~l~~i~vg 292 (450)
++ ..++++|| +++||+||.+. ..|+|+||+.+. .++.|+||... ..+|+|+|++|+||
T Consensus 145 ~~---~~s~~~ql~~~~~~~~~FS~~L~~~-----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg 216 (381)
T 1t6e_X 145 NS---GLALPAQVASAQKVANRFLLCLPTG-----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVG 216 (381)
T ss_dssp SS---TTSHHHHHHHHHTCCSEEEEECCSS-----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEET
T ss_pred CC---cchhHHHHhhhcccCceEEEEeCCC-----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEc
Confidence 99 88998887 47999999874 248999996432 24679999432 35678999999999
Q ss_pred CEEeecCCcccccCCCcCCCceEEeccCceeecchHHHHHHHHHHHHHHhc------cCCCC-CCCCCccccccCccCC-
Q 044367 293 EKMLDIDPNLFKKNDTWSDAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQG------LLPSY-PMDPAWHLCYSGNINR- 364 (450)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~------~~~~~-~~~~~~~~C~~~~~~~- 364 (450)
++.+.++...|. .+.+||||||++++||+++|++|++++.+.+.. .+.+. .....+.+|+......
T Consensus 217 ~~~~~~~~~~~~------~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~ 290 (381)
T 1t6e_X 217 DTRVPVPEGALA------TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGN 290 (381)
T ss_dssp TEECCCCTTCSC------TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCE
T ss_pred CEEecCCHHHcc------CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcc
Confidence 998876654442 357999999999999999999999999987741 12222 1223468998643211
Q ss_pred --cccCCCeEEEEecCCCEEEeCCCceEEEeCCCeEEEEEEeCCCCC--CCCCCceeeehhhhcceEEEEECCCCEEEEE
Q 044367 365 --DLQGFPAMAFHFAGGADLVLDAESVFYQESSSVFCLAVGPSDING--ERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQ 440 (450)
Q Consensus 365 --~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~--~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa 440 (450)
....+|+|+|+|+||++++||+++|+++..++..|++++...... ....+.||||+.|||++|+|||++++|||||
T Consensus 291 ~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA 370 (381)
T 1t6e_X 291 NLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFS 370 (381)
T ss_dssp ETTEECCCCEEEEETTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred cccCCcCCeEEEEECCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEe
Confidence 013789999999867999999999999876678999887765310 0012469999999999999999999999999
Q ss_pred cCC
Q 044367 441 RID 443 (450)
Q Consensus 441 ~~~ 443 (450)
++.
T Consensus 371 ~~~ 373 (381)
T 1t6e_X 371 RLP 373 (381)
T ss_dssp ECC
T ss_pred ccc
Confidence 855
No 26
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=5.1e-52 Score=417.26 Aligned_cols=314 Identities=18% Similarity=0.278 Sum_probs=241.5
Q ss_pred ceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCCCCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEeeeCC
Q 044367 97 PVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNIRYTN 175 (450)
Q Consensus 97 ~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~~Yg~ 175 (450)
..|+++|.||||||+++|+|||||+++||+|.+| |.. +.|+|++|+|++. ..|.|.+.|++
T Consensus 28 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~~~~y~~~~SsT~~~----------------~~~~~~i~Yg~ 89 (402)
T 3vf3_A 28 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLHRYYQRQLSSTYRD----------------LRKGVYVPYTQ 89 (402)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCSCCCCGGGCTTCEE----------------EEEEEEEECSS
T ss_pred CEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--CcccCCcCcccCccccc----------------CCCEEEEEECc
Confidence 6899999999999999999999999999999998 554 7999999999998 57899999999
Q ss_pred CCccceeEEEEEEEeecCCCCceeee-eEEEEeEecCCCCCC--CCcceeeecCCCCCC-----CCcHHhhh------cC
Q 044367 176 GPDSQGTIGSEQFNFETSDEGKTFLY-DVGFGCSHNNAHFSD--EQFTGVFGLGPATSS-----THSLVEKV------GS 241 (450)
Q Consensus 176 gs~~~G~~~~D~v~~~~~~~~~~~~~-~~~fg~~~~~~~~~~--~~~~GIlGLg~~~~~-----~~sl~~ql------~~ 241 (450)
|+. .|.+++|+|+|++. ..+. .+.|+++....+.+. ...+||||||++..+ ..++++|| .+
T Consensus 90 Gs~-~G~~~~D~v~ig~~----~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~ 164 (402)
T 3vf3_A 90 GKW-EGELGTDLVSIPHG----PNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPN 164 (402)
T ss_dssp CEE-EEEEEEEEEECTTS----CSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCS
T ss_pred EEE-EEEEEEEEEEECCc----cccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCcc
Confidence 995 99999999999852 2333 355888877665542 358999999998433 23455554 46
Q ss_pred ceEEeecCCCCC-------CcccceEEecCCCcCcc-----eecccccCCCceEEEEeeEEECCEEeecCCcccccCCCc
Q 044367 242 KFSYCIGNLNYF-------EYAYNMLILGEGAILEG-----DSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTW 309 (450)
Q Consensus 242 ~Fs~~l~~~~~~-------~~~~G~l~fG~~~d~~~-----~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~ 309 (450)
+||+||.+.... ....|.|+|| ++|+++ .|+|+ ....+|.|.+++|+|+++.+.++...+.
T Consensus 165 ~FS~~l~~~~~~~~~~~~~~~~~G~l~fG-g~d~~~~~g~l~~~p~-~~~~~w~v~l~~i~v~g~~~~~~~~~~~----- 237 (402)
T 3vf3_A 165 LFSLQLCGAGFPLNQSEVLASVGGSMIIG-GIDHSLYTGSLWYTPI-RREWYYEVIIVRVEINGQDLKMDCKEYN----- 237 (402)
T ss_dssp CEEEEECCCC-------------EEEEES-SCCGGGEEEEEEEEEC-SSBTTBEECEEEEEETTEECCCCGGGGG-----
T ss_pred ceEEEeecccccccccccccCCCCEEEeC-CcCcccccCceEEEeC-CcCcEEEEEEeEEEECCEEecccccccC-----
Confidence 999999753100 2235899999 555554 46666 4578999999999999999876544332
Q ss_pred CCCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCC---CccccccCccCCcccCCCeEEEEecCCC-----E
Q 044367 310 SDAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDP---AWHLCYSGNINRDLQGFPAMAFHFAGGA-----D 381 (450)
Q Consensus 310 ~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~C~~~~~~~~~~~~P~i~f~f~gg~-----~ 381 (450)
...+||||||++++||.+++++|++++++.... ....... +.++|+..... ....+|+|+|+|+++. +
T Consensus 238 -~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~C~~~~~~-~~~~~P~i~f~f~g~~~~~~~~ 313 (402)
T 3vf3_A 238 -YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST--EKFPDGFWLGEQLVCWQAGTT-PWNIFPVISLYLMGEVTNQSFR 313 (402)
T ss_dssp -SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTT--SCCCTTGGGTCSCEEEETTCC-CGGGSCCEEEEEECSSTTEEEE
T ss_pred -CCeEEEECCCCcccCCHHHHHHHHHHHhhhccc--cccCccccccccccccccccc-hHhhCCceEEEEecCCCCceEE
Confidence 467999999999999999999999999998531 1222221 25899864311 1247999999999443 5
Q ss_pred EEeCCCceEEEeCCC----eEEEEEEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCCCCCccC
Q 044367 382 LVLDAESVFYQESSS----VFCLAVGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRIDCELLAD 449 (450)
Q Consensus 382 ~~l~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~~ 449 (450)
++|++++|+++..+. ..|+++...... +.||||++|||++|+|||++++|||||+++|+..++
T Consensus 314 ~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~~-----~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~ 380 (402)
T 3vf3_A 314 ITILPQQYLRPVEDVATSQDDCYKFAISQSS-----TGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDE 380 (402)
T ss_dssp EEECHHHHEEECCCGGGTTEEEEEECEEEES-----SCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCBCS
T ss_pred EEECHHHheehhccCCCCCceEEEEeccCCC-----CcEEEChHHhCCeEEEEECCCCEEEEEecccCcccC
Confidence 999999999986542 589863221111 359999999999999999999999999999998654
No 27
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=3.4e-53 Score=427.55 Aligned_cols=288 Identities=20% Similarity=0.309 Sum_probs=236.5
Q ss_pred cceEEEEEEECCCCceEEEEEECCCCceeEeCCCCC--CCCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEee
Q 044367 96 VPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCE--QCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNIR 172 (450)
Q Consensus 96 ~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~--~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~~ 172 (450)
+.+|+++|.||||||++.|++||||+++||+|..|. .|.. +.|||++|+|++. .+|.|.+.
T Consensus 137 ~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~----------------~~~~~~i~ 200 (453)
T 2bju_A 137 NIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEK----------------DGTKVEMN 200 (453)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEE----------------EEEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeE----------------CCcEEEEE
Confidence 479999999999999999999999999999999997 5876 8999999999998 57899999
Q ss_pred eCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCC--CC-CC-CCcceeeecCCCCCC---CCcHHhhh------
Q 044367 173 YTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNA--HF-SD-EQFTGVFGLGPATSS---THSLVEKV------ 239 (450)
Q Consensus 173 Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~--~~-~~-~~~~GIlGLg~~~~~---~~sl~~ql------ 239 (450)
|++|+ ++|.+++|+|+|++ +.++ +.|||++... +. +. ...+||||||++..+ ..+++++|
T Consensus 201 YgdGs-~~G~~~~Dtv~ig~-----~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i 273 (453)
T 2bju_A 201 YVSGT-VSGFFSKDLVTVGN-----LSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKI 273 (453)
T ss_dssp CSSSE-EEEEEEEEEEEETT-----EEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSS
T ss_pred cCCCC-eEEEEEEEEEEEeC-----cEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCC
Confidence 99999 69999999999998 8899 9999999876 42 21 358999999998433 22344443
Q ss_pred -cCceEEeecCCCCCCcccceEEecCCCcCc-----ceecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCCc
Q 044367 240 -GSKFSYCIGNLNYFEYAYNMLILGEGAILE-----GDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAG 313 (450)
Q Consensus 240 -~~~Fs~~l~~~~~~~~~~G~l~fG~~~d~~-----~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~ 313 (450)
.++||+||.+.. ...|.|+||+ .|++ +.|+|+ ...++|.|.++ |+|+++.+ . ...
T Consensus 274 ~~~~FS~~L~~~~---~~~G~l~fGg-~D~~~y~G~l~~~pv-~~~~~w~V~l~-I~Vgg~~~--~-----------~~~ 334 (453)
T 2bju_A 274 ENALFTFYLPVHD---KHTGFLTIGG-IEERFYEGPLTYEKL-NHDLYWQITLD-AHVGNIML--E-----------KAN 334 (453)
T ss_dssp SSCEEEEECCBTT---TBCEEEEESS-CCGGGEEEEEEEEEE-EEETTEEEEEE-EEETTEEE--E-----------EEE
T ss_pred CCCEEEEEeCCCC---CCCeEEEECC-CCHHHcCCceEEEec-CCCceEEEEEE-EEECcEEe--c-----------ccc
Confidence 579999999863 2348999995 5544 456777 45689999999 99999421 1 568
Q ss_pred eEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCC-CCccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEEE
Q 044367 314 VFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMD-PAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFYQ 392 (450)
Q Consensus 314 ~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~ 392 (450)
+||||||++++||++++++|++++++.. ...+ .+.++|+. ..+|+|+|+|+ |.+++||+++|+++
T Consensus 335 aIiDSGTsl~~lP~~~~~~l~~~i~~~~------~~~g~~~~v~C~~-------~~~P~itf~fg-g~~~~l~~~~yi~~ 400 (453)
T 2bju_A 335 CIVDSGTSAITVPTDFLNKMLQNLDVIK------VPFLPFYVTLCNN-------SKLPTFEFTSE-NGKYTLEPEYYLQH 400 (453)
T ss_dssp EEECTTCCSEEECHHHHHHHTTTSSCEE------CTTSSCEEEETTC-------TTCCCEEEECS-SCEEEECHHHHEEE
T ss_pred EEEcCCCCeEecCHHHHHHHHHHhCCcc------cCCCceEEEecCC-------CCCCcEEEEEC-CEEEEECHHHhEee
Confidence 9999999999999999999999886531 1122 34689975 47899999997 99999999999998
Q ss_pred eCC--CeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 393 ESS--SVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 393 ~~~--~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
... +..|+. +...... .+.||||++|||++|+|||++++|||||+++
T Consensus 401 ~~~~g~~~C~~~~~~~~~~----~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 401 IEDVGPGLCMLNIIGLDFP----VPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp CTTTSTTEEEECEEECCCS----SCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cccCCCceEEEEEEeCCCC----CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 753 468985 6554421 1369999999999999999999999999975
No 28
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.7e-52 Score=418.26 Aligned_cols=313 Identities=19% Similarity=0.296 Sum_probs=241.2
Q ss_pred ceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEeeeCCC
Q 044367 97 PVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQCGATTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNIRYTNG 176 (450)
Q Consensus 97 ~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~C~~~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~~Yg~g 176 (450)
..|+++|.||||+|++.|+|||||+++||+|..|..|. +.|||++|+||+. ..|.|.+.|++|
T Consensus 21 ~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~~-~~y~~~~SsT~~~----------------~~~~~~i~Yg~G 83 (395)
T 2qp8_A 21 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLH-RYYQRQLSSTYRD----------------LRKGVYVPYTQG 83 (395)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCS-CCCCGGGCTTCEE----------------EEEEEEEECSSC
T ss_pred ceEEEEEEecCCCceEEEEEecCCCceEEECCCCcccc-CCcCcccCCCcee----------------CCceEEEEECCc
Confidence 68999999999999999999999999999999987664 6899999999998 578999999999
Q ss_pred CccceeEEEEEEEeecCCCCceeee-eEEEEeEecCCCCCC--CCcceeeecCCCCCC-----CC----cHHhhh--cCc
Q 044367 177 PDSQGTIGSEQFNFETSDEGKTFLY-DVGFGCSHNNAHFSD--EQFTGVFGLGPATSS-----TH----SLVEKV--GSK 242 (450)
Q Consensus 177 s~~~G~~~~D~v~~~~~~~~~~~~~-~~~fg~~~~~~~~~~--~~~~GIlGLg~~~~~-----~~----sl~~ql--~~~ 242 (450)
+. +|.+++|+|+|++. ..++ .+.|+++....+.|. ...+||||||+...+ .. +|++|. .++
T Consensus 84 s~-~G~~~~Dtv~ig~g----~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~~~ 158 (395)
T 2qp8_A 84 KW-EGELGTDLVSIPHG----PNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNL 158 (395)
T ss_dssp EE-EEEEEEEEEECTTS----CSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSC
T ss_pred EE-EEEEEeEEEEECCC----CCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCcce
Confidence 86 99999999999831 2232 367888776555553 358999999998432 22 444552 579
Q ss_pred eEEeecCCCC-------CCcccceEEecCCCcCc-----ceecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcC
Q 044367 243 FSYCIGNLNY-------FEYAYNMLILGEGAILE-----GDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWS 310 (450)
Q Consensus 243 Fs~~l~~~~~-------~~~~~G~l~fG~~~d~~-----~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~ 310 (450)
||+||.+..- .....|.|+||+ .|++ +.|+|+ ....+|.|.+++|+|+++.+.++...+.
T Consensus 159 FS~~L~~~~~~~~~~~~~~~~~G~l~fGg-~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~g~~~~~~~~~~~------ 230 (395)
T 2qp8_A 159 FSLQLCGAGFPLNQSEVLASVGGSMIIGG-IDHSLYTGSLWYTPI-RREWYYEVIIVRVEINGQDLKMDCKEYN------ 230 (395)
T ss_dssp EEEEECCCSSCCCHHHHHHSCCEEEEETS-CCGGGEEEEEEEEEC-CSBTTBBCCEEEEEETTEECCCCGGGGG------
T ss_pred EEEEeccccccccccccccCCCcEEEECC-cCcccccCceEEecc-CCCceEEEEEEEEEECCEEcccCccccC------
Confidence 9999976310 012348999995 5544 456777 4468999999999999998876544432
Q ss_pred CCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCC---CCccccccCccCCcccCCCeEEEEecCCC-----EE
Q 044367 311 DAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMD---PAWHLCYSGNINRDLQGFPAMAFHFAGGA-----DL 382 (450)
Q Consensus 311 ~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~~~~P~i~f~f~gg~-----~~ 382 (450)
...+||||||++++||+++|++|++++.+.... ...... .+.++|+..... ....+|+|+|+|+|+. ++
T Consensus 231 ~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~--~~~~~~~~~~~~~~C~~~~~~-~~~~~P~i~f~f~g~~~~~~~~~ 307 (395)
T 2qp8_A 231 YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST--EKFPDGFWLGEQLVCWQAGTT-PWNIFPVISLYLMGEVTNQSFRI 307 (395)
T ss_dssp SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTT--SCCCHHHHTTCSCEEESTTCC-CGGGSCCEEEEEECSSTTEEEEE
T ss_pred CceEEEEcCCCcEecCHHHHHHHHHHHhhhccc--ccCCccccccccccccccccc-hHhhCCcEEEEEccCCCCceEEE
Confidence 457999999999999999999999999987532 111111 124789864321 1246999999999543 79
Q ss_pred EeCCCceEEEeCC----CeEEEE--EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCCCCCccC
Q 044367 383 VLDAESVFYQESS----SVFCLA--VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRIDCELLAD 449 (450)
Q Consensus 383 ~l~~~~y~~~~~~----~~~C~~--~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~~ 449 (450)
+|++++|+++..+ ...|++ +.... +.||||+.|||++|+|||++++|||||+++|++.++
T Consensus 308 ~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~-------~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~ 373 (395)
T 2qp8_A 308 TILPQQYLRPVEDVATSQDDCYKFAISQSS-------TGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDE 373 (395)
T ss_dssp EECHHHHEEEECCTTCCSCEEEEECEEEES-------SCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCS
T ss_pred EECHHHhEeecccCCCCCceEEEEEecCCC-------CcEEEChHHhCCeeEEEECCCCEEEEEeccCCCCCC
Confidence 9999999998653 358974 44321 359999999999999999999999999999997554
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=4.1e-52 Score=415.44 Aligned_cols=312 Identities=21% Similarity=0.308 Sum_probs=239.9
Q ss_pred ceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEeeeCCC
Q 044367 97 PVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQCGATTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNIRYTNG 176 (450)
Q Consensus 97 ~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~C~~~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~~Yg~g 176 (450)
..|+++|.||||+|++.|+|||||+++||+|.+|..|. +.|||++|+||+. ..|.|.+.|++|
T Consensus 13 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~-~~f~~~~SsT~~~----------------~~~~~~i~Yg~G 75 (383)
T 2ewy_A 13 RGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID-TYFDTERSSTYRS----------------KGFDVTVKYTQG 75 (383)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS-CCCCGGGCTTCEE----------------EEEEEEEECSSC
T ss_pred CcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc-cCcccccCcccee----------------CCceEEEEECCc
Confidence 67999999999999999999999999999999997775 5899999999998 578999999999
Q ss_pred CccceeEEEEEEEeecCCCCceee-eeEEEEeEecCCCCCC--CCcceeeecCCCCCC-----CC----cHHhhh--cCc
Q 044367 177 PDSQGTIGSEQFNFETSDEGKTFL-YDVGFGCSHNNAHFSD--EQFTGVFGLGPATSS-----TH----SLVEKV--GSK 242 (450)
Q Consensus 177 s~~~G~~~~D~v~~~~~~~~~~~~-~~~~fg~~~~~~~~~~--~~~~GIlGLg~~~~~-----~~----sl~~ql--~~~ 242 (450)
+. +|.+++|+|+|++. ... ..+.|+++....+.|. ...+||||||++..+ .. +|++|. .++
T Consensus 76 s~-~G~~~~Dtv~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i~~~ 150 (383)
T 2ewy_A 76 SW-TGFVGEDLVTIPKG----FNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANIPNV 150 (383)
T ss_dssp EE-EEEEEEEEEEETTT----EEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTCCSC
T ss_pred EE-EEEEEEEEEEECCC----ccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCCCcc
Confidence 85 99999999999862 222 2467888876655543 258999999998432 12 455553 579
Q ss_pred eEEeecCC----CCCCcccceEEecCCCcC-----cceecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCCc
Q 044367 243 FSYCIGNL----NYFEYAYNMLILGEGAIL-----EGDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAG 313 (450)
Q Consensus 243 Fs~~l~~~----~~~~~~~G~l~fG~~~d~-----~~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~ 313 (450)
||+||.+. .......|.|+||+ .|+ ++.|+|+ ....+|+|.+++|+|+++.+.++...+. ...
T Consensus 151 FS~~l~~~~~~~~~~~~~~G~l~fGg-~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~g~~~~~~~~~~~------~~~ 222 (383)
T 2ewy_A 151 FSMQMCGAGLPVAGSGTNGGSLVLGG-IEPSLYKGDIWYTPI-KEEWYYQIEILKLEIGGQSLNLDCREYN------ADK 222 (383)
T ss_dssp EEEEECCC---------CCEEEEETS-CCGGGCCSCEEEEEC-SSBTTBBCCEEEEEETTEECCCCTTTTT------SSC
T ss_pred eEEEeeccccccccCCCCCeEEEeCc-cchhhccCccEEEec-CCCceEEEEEEEEEECCEEccccccccC------Ccc
Confidence 99999642 11122358999995 443 3567777 4568999999999999998876544332 457
Q ss_pred eEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCC---CCccccccCccCCcccCCCeEEEEecCC-----CEEEeC
Q 044367 314 VFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMD---PAWHLCYSGNINRDLQGFPAMAFHFAGG-----ADLVLD 385 (450)
Q Consensus 314 ~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~~~~P~i~f~f~gg-----~~~~l~ 385 (450)
+||||||++++||++++++|++++.+.... .....+ .+.++|+..... ....+|+|+|+|+|+ .+++||
T Consensus 223 aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~--~~~~~~~~~~~~~~C~~~~~~-~~~~~P~i~f~f~g~~~~~~~~~~l~ 299 (383)
T 2ewy_A 223 AIVDSGTTLLRLPQKVFDAVVEAVARASLI--PEFSDGFWTGSQLACWTNSET-PWSYFPKISIYLRDENSSRSFRITIL 299 (383)
T ss_dssp EEECTTCSSEEEEHHHHHHHHHHHHHTTCS--SCCCHHHHHTSEEEEECSSSC-GGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred EEEEcCCccccCCHHHHHHHHHHHhhhccc--ccCccccccccccccccCCcc-cHhhCCcEEEEECCCCCCceEEEEEC
Confidence 999999999999999999999999887531 111111 125799864311 124689999999953 379999
Q ss_pred CCceEEEeC---CCeEEEEE--EeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCCCCCcc
Q 044367 386 AESVFYQES---SSVFCLAV--GPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRIDCELLA 448 (450)
Q Consensus 386 ~~~y~~~~~---~~~~C~~~--~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~ 448 (450)
+++|+.+.. .+..|+++ .... +.||||+.|||++|+|||++++|||||+++|....
T Consensus 300 ~~~yi~~~~~~~~~~~C~~~~i~~~~-------~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~ 360 (383)
T 2ewy_A 300 PQLYIQPMMGAGLNYECYRFGISPST-------NALVIGATVMEGFYVIFDRAQKRVGFAASPCAEIA 360 (383)
T ss_dssp HHHHEEEECCCTTCSEEEEESEEEES-------SCEEECHHHHTTEEEEEETTTTEEEEEECTTCBSS
T ss_pred hHHheeecccCCCCceeEEEEecCCC-------CcEEEChHHhCCeeEEEECCCCeEEEEeccCCCcC
Confidence 999999864 25689853 3321 35999999999999999999999999999998643
No 30
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.4e-52 Score=409.98 Aligned_cols=289 Identities=16% Similarity=0.223 Sum_probs=237.0
Q ss_pred cceEEEEEEECCCCceEEEEEECCCCceeEeCCCCC--CC--CC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeE
Q 044367 96 VPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCE--QC--GA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYN 170 (450)
Q Consensus 96 ~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~--~C--~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~ 170 (450)
+..|+++|.|| +|++.|+|||||+++||+|..|. .| .. +.|||++| |++. .++.|.
T Consensus 16 ~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~----------------~~~~~~ 76 (330)
T 1yg9_A 16 NTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYIS----------------DGNVQV 76 (330)
T ss_dssp CTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEE----------------EEEEEE
T ss_pred CCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEE----------------CCCEEE
Confidence 37899999999 89999999999999999999998 59 65 89999999 9988 578999
Q ss_pred eeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCCCC-CCcceeeecCCCCCC----CCcHHhhh------
Q 044367 171 IRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHFSD-EQFTGVFGLGPATSS----THSLVEKV------ 239 (450)
Q Consensus 171 ~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~GIlGLg~~~~~----~~sl~~ql------ 239 (450)
+.|++|+. .|.+++|+|+|++ +.++++.|||++.....|. ...+||||||++..+ ..++++||
T Consensus 77 i~Yg~Gs~-~G~~~~Dtv~ig~-----~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i 150 (330)
T 1yg9_A 77 KFFDTGSA-VGRGIEDSLTISQ-----LTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI 150 (330)
T ss_dssp EETTTEEE-EEEEEEEEEEETT-----EEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS
T ss_pred EEECCceE-EEEEEEEEEEECC-----EEEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC
Confidence 99999996 9999999999998 8999999999998743232 348999999998443 22355554
Q ss_pred cCceEEeecCCCCCCcccceEEecCCCcCc-----ceecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCCce
Q 044367 240 GSKFSYCIGNLNYFEYAYNMLILGEGAILE-----GDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAGV 314 (450)
Q Consensus 240 ~~~Fs~~l~~~~~~~~~~G~l~fG~~~d~~-----~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~~ 314 (450)
.++||+||.+..+. ...|.|+||+ .|++ +.|+|+ ...++|.|.+++|+|+++.+... ...+
T Consensus 151 ~~~FS~~l~~~~~~-~~~G~l~fGg-~d~~~~~g~l~~~p~-~~~~~w~v~l~~i~v~~~~~~~~-----------~~~a 216 (330)
T 1yg9_A 151 APVFSIHHARFQDG-EHFGEIIFGG-SDWKYVDGEFTYVPL-VGDDSWKFRLDGVKIGDTTVAPA-----------GTQA 216 (330)
T ss_dssp CSEEEEEEEECTTS-CEEEEEEETS-CCGGGEEEEEEEEEB-SCTTSCCEECSEEEETTEEEECT-----------TCEE
T ss_pred CceEEEEEcCCCCC-CCCCEEEECC-cCHHHccCceEEEEC-CCCCEEEEEeCeEEECCEEEcCC-----------CcEE
Confidence 57999999886321 1248999994 5544 456777 46789999999999999876411 6789
Q ss_pred EEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCC--CC-ccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEE
Q 044367 315 FIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMD--PA-WHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFY 391 (450)
Q Consensus 315 iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~--~~-~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~ 391 (450)
||||||++++||++++++|++++++.... .+ .+ .++|+. ...+|+|+|+|+ |.+++||+++|++
T Consensus 217 iiDSGTs~~~lP~~~~~~l~~~~~~~~~~------~g~~~~~~~~C~~------~~~~p~i~f~fg-g~~~~l~~~~y~~ 283 (330)
T 1yg9_A 217 IIDTSKAIIVGPKAYVNPINEAIGCVVEK------TTTRRICKLDCSK------IPSLPDVTFVIN-GRNFNISSQYYIQ 283 (330)
T ss_dssp EECTTCSSEEEEHHHHHHHHHHHTCEEEE------CSSCEEEEECGGG------GGGSCCEEEEET-TEEEEECHHHHEE
T ss_pred EEecCCccccCCHHHHHHHHHHhCCcccC------CCceEEEEEECCC------ccccCcEEEEEC-CEEEEECHHHhcc
Confidence 99999999999999999999999654321 12 34 578975 357899999997 9999999999999
Q ss_pred EeCCCeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 392 QESSSVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 392 ~~~~~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
+. +..|+. +...... +.||||++|||++|+|||++++|||||+++
T Consensus 284 ~~--~~~C~~~i~~~~~~-----~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 284 QN--GNLCYSGFQPCGHS-----DHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EE--TTEEEESEEEETTC-----SSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cC--CCcEEEEEEeCCCC-----CeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 87 568985 5544211 469999999999999999999999999874
No 31
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.2e-52 Score=424.11 Aligned_cols=288 Identities=18% Similarity=0.268 Sum_probs=238.4
Q ss_pred cceEEEEEEECCCCceEEEEEECCCCceeEeCCCCC--CCCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEee
Q 044367 96 VPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCE--QCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNIR 172 (450)
Q Consensus 96 ~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~--~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~~ 172 (450)
+.+|+++|.||||||++.|++||||+++||+|..|. .|.. +.|||++|+|++. .+|.|.+.
T Consensus 136 d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~~~ydps~SsT~~~----------------~~~~f~i~ 199 (451)
T 3qvc_A 136 NVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEK----------------DDTPVKLT 199 (451)
T ss_dssp CEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTSCCBCGGGCTTCEE----------------EEEEEEEE
T ss_pred CCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCCCCCCCCCCccccc----------------CCCEEEEE
Confidence 478999999999999999999999999999999995 5987 8999999999998 57899999
Q ss_pred eCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEec----CCCCCC-CCcceeeecCCCCCC---CCcHHhhh-----
Q 044367 173 YTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHN----NAHFSD-EQFTGVFGLGPATSS---THSLVEKV----- 239 (450)
Q Consensus 173 Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~----~~~~~~-~~~~GIlGLg~~~~~---~~sl~~ql----- 239 (450)
|++|+ +.|.+++|+|+|++ ..++ +.|||++. ..+ +. ...+||||||++..+ ..+++++|
T Consensus 200 YgdGs-~~G~~~~Dtv~igg-----~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~ 271 (451)
T 3qvc_A 200 SKAGT-ISGIFSKDLVTIGK-----LSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNK 271 (451)
T ss_dssp CSSEE-EEEEEEEEEEEETT-----EEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTS
T ss_pred ECCCE-EEEEEEEEEEEECC-----EEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCC
Confidence 99999 79999999999998 8999 99999998 655 42 348999999998543 23555554
Q ss_pred --cCceEEeecCCCCCCcccceEEecCCCcCcc-----eecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCC
Q 044367 240 --GSKFSYCIGNLNYFEYAYNMLILGEGAILEG-----DSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDA 312 (450)
Q Consensus 240 --~~~Fs~~l~~~~~~~~~~G~l~fG~~~d~~~-----~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~ 312 (450)
.++||+||.+... ..|.|+|| +.|+++ .|+|+ ..+++|.|.++ |+|+++ .. ...
T Consensus 272 I~~~~FS~~L~~~~~---~~G~l~fG-giD~s~y~G~l~~~pv-~~~~~w~v~l~-I~Vgg~-~~------------~~~ 332 (451)
T 3qvc_A 272 IEQAVYSIYLPPENK---NKGYLTIG-GIEERFFDGPLNYEKL-NHDLMWQVDLD-VHFGNV-SS------------KKA 332 (451)
T ss_dssp SSSSEEEEECCTTCT---TEEEEEES-SCCGGGEEEEEEEEEC-SSTTSSEEEEE-EEETTE-EE------------EEE
T ss_pred CCCCEEEEEEcCCCC---CCCEEEEC-CcchhhcCCceEEEEc-ccCCeeEEEEE-EEECCc-cC------------CCc
Confidence 5689999998632 34899999 555544 56666 46789999999 999998 11 156
Q ss_pred ceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEEE
Q 044367 313 GVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFYQ 392 (450)
Q Consensus 313 ~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~ 392 (450)
.+||||||+++++|++++++|.+++++.... ..+.+.++|.. ..+|+|+|+|+ |.+++||+++|+++
T Consensus 333 ~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~-----~~g~y~v~C~~-------~~~P~itf~fg-g~~i~lp~~~yi~~ 399 (451)
T 3qvc_A 333 NVILDSATSVITVPTEFFNQFVESASVFKVP-----FLSLYVTTCGN-------TKLPTLEYRSP-NKVYTLEPKQYLEP 399 (451)
T ss_dssp EEEECTTBSSEEECHHHHHHHHTTTTCEECT-----TSSCEEEETTC-------TTCCCEEEEET-TEEEEECHHHHEEE
T ss_pred eEEEeCCCccccCCHHHHHHHHHHcCCeecC-----CCCeEEeeCCc-------CcCCcEEEEEC-CEEEEEcHHHheee
Confidence 7999999999999999999999998655321 12334689971 57899999998 99999999999998
Q ss_pred eCC--CeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 393 ESS--SVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 393 ~~~--~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
... +..|+. +...... .+.||||++|||++|+|||++++|||||+++
T Consensus 400 ~~~~~~~~C~~~i~~~~~~----~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 400 LENIFSALCMLNIVPIDLE----KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp CTTTSTTEEEECEEECCCS----TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cccCCCCeEEEEEEeCCCC----CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 653 567885 5554321 1469999999999999999999999999975
No 32
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=9.6e-53 Score=410.12 Aligned_cols=297 Identities=17% Similarity=0.201 Sum_probs=235.9
Q ss_pred ccccccCCCCcceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCCC--CC-CCCCCCCCCcceeecCCCCCCCCCCCC
Q 044367 86 RAHLHPGISTVPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQC--GA-TTFDPSKSLTYATLPCDSSYCTNDCGG 162 (450)
Q Consensus 86 ~~~~~~~~~~~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~C--~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~ 162 (450)
++.+.+...+ .+|+++|.|| +|++.|+|||||+++||+|.+|..| .. +.|||++|+ ++.
T Consensus 5 ~v~~~~~~~~-~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~-------------- 66 (323)
T 1bxo_A 5 VATNTPTAND-EEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KEL-------------- 66 (323)
T ss_dssp EEEEEECGGG-SCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEE--------------
T ss_pred ceeeeecCCC-CEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-ccc--------------
Confidence 3444444433 8999999999 8999999999999999999999875 44 899999998 654
Q ss_pred CCCCceeEeeeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCCCC--CCcceeeecCCCCCC------CCc
Q 044367 163 YPDECWYNIRYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHFSD--EQFTGVFGLGPATSS------THS 234 (450)
Q Consensus 163 ~~~~~~~~~~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~--~~~~GIlGLg~~~~~------~~s 234 (450)
+.|.|.+.|++|+.++|.+++|+|+|++ +.++++.|||++...+.+. ...+||||||++..+ ..+
T Consensus 67 --~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 139 (323)
T 1bxo_A 67 --SGYTWSISYGDGSSASGNVFTDSVTVGG-----VTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTT 139 (323)
T ss_dssp --EEEEEEEECTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCC
T ss_pred --CCCeEEEEeCCCCeEEEEEEEEEEEECC-----EEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCC
Confidence 5789999999999779999999999998 8999999999998765332 258999999998432 224
Q ss_pred HHhhh-----cCceEEeecCCCCCCcccceEEecCCCc----CcceecccccCCCceEEEEeeEEECCEEeecCCccccc
Q 044367 235 LVEKV-----GSKFSYCIGNLNYFEYAYNMLILGEGAI----LEGDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKK 305 (450)
Q Consensus 235 l~~ql-----~~~Fs~~l~~~~~~~~~~G~l~fG~~~d----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~ 305 (450)
+++|| .++||+||.+. ..|+|+||+.+. .++.|+|+....++|.|++++|+|++ ...
T Consensus 140 ~~~~l~~~i~~~~FS~~L~~~-----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~-------- 205 (323)
T 1bxo_A 140 FFDTVKSSLAQPLFAVALKHQ-----QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-QSG-------- 205 (323)
T ss_dssp HHHHHGGGBSSSEEEEECCSS-----SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-EEE--------
T ss_pred HHHHHHHhcCCcEEEEEEeCC-----CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-ccC--------
Confidence 55554 58999999863 248999995432 23567787546789999999999999 211
Q ss_pred CCCcCCCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeC
Q 044367 306 NDTWSDAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLD 385 (450)
Q Consensus 306 ~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~ 385 (450)
....+||||||++++||++++++|++++.+.... ...+.+.++|+ ..+|+|+|+|+ |.+++||
T Consensus 206 ----~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~~----~~~g~~~~~C~--------~~~P~i~f~fg-g~~~~l~ 268 (323)
T 1bxo_A 206 ----DGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQD----SNAGGYVFDCS--------TNLPDFSVSIS-GYTATVP 268 (323)
T ss_dssp ----EEEEEEECTTCSSEEECHHHHHHHHTTSTTCEEE----TTTTEEEECTT--------CCCCCEEEEET-TEEEEEC
T ss_pred ----CCceEEEeCCCCceeCCHHHHHHHHHhCCCceEc----CcCCEEEEECC--------CCCceEEEEEC-CEEEEEC
Confidence 1567999999999999999999999988433211 11123357897 36899999997 9999999
Q ss_pred CCceEEEeCC-CeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCC
Q 044367 386 AESVFYQESS-SVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 386 ~~~y~~~~~~-~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
+++|++...+ ...|++ +...... +.||||++|||++|+|||++++|||||++.
T Consensus 269 ~~~~~~~~~~~~~~C~~~i~~~~~~-----~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 269 GSLINYGPSGDGSTCLGGIQSNSGI-----GFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp HHHHEEEECSSSSCEEESEEECTTC-----SSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHHeEEeccCCCCeEEEEEECCCCC-----CcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 9999987644 468987 5544321 469999999999999999999999999863
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=6.3e-51 Score=400.30 Aligned_cols=293 Identities=16% Similarity=0.244 Sum_probs=230.6
Q ss_pred ceEEEEEEECCCCceEEEEEECCCCceeEeCCCCCCCCCCCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEeeeCCC
Q 044367 97 PVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCEQCGATTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNIRYTNG 176 (450)
Q Consensus 97 ~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~~C~~~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~~Yg~g 176 (450)
..|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++ ..|.|.+.|++|
T Consensus 12 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-------~~y~~s~Ss~~------------------~~~~~~i~Yg~G 66 (340)
T 1wkr_A 12 VDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-------KSYVKTSTSSA------------------TSDKVSVTYGSG 66 (340)
T ss_dssp SCEEEEEEETTTTEEEEEEEETTCCCCEECSS-------SCCCCCTTCEE------------------EEEEEEEECSSC
T ss_pred cEEEEEEEECCCCcEEEEEEeCCChhheecCC-------CccCCcCCccc------------------cCceEEEEECCc
Confidence 68999999999999999999999999999986 47999988754 357999999999
Q ss_pred CccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCCCCCCCcceeeecCCCCCC-----------CCcHHhhh------
Q 044367 177 PDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAHFSDEQFTGVFGLGPATSS-----------THSLVEKV------ 239 (450)
Q Consensus 177 s~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GIlGLg~~~~~-----------~~sl~~ql------ 239 (450)
+ ++|.+++|+|+|++ +.++++.|||++...+ |. ..+||||||+...+ ..+++.+|
T Consensus 67 s-~~G~~~~Dtv~~g~-----~~v~~~~fg~~~~~~~-~~-~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i 138 (340)
T 1wkr_A 67 S-FSGTEYTDTVTLGS-----LTIPKQSIGVASRDSG-FD-GVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTI 138 (340)
T ss_dssp E-EEEEEEEEEEEETT-----EEEEEEEEEEEEEEES-CT-TCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSS
T ss_pred E-EEEEEEEEEEEECC-----EEEcceEEEEEEccCC-Cc-CCCcEEECCccccccccccccccccCCCHHHHHHHcCCC
Confidence 8 69999999999998 8999999999998765 43 58999999998332 13455554
Q ss_pred -cCceEEeecCCCCCCcccceEEecCCCc----CcceecccccC---CCceEEEEeeEEECC-EEeecCCcccccCCCcC
Q 044367 240 -GSKFSYCIGNLNYFEYAYNMLILGEGAI----LEGDSTPMSVI---DGSYYVTLEGISLGE-KMLDIDPNLFKKNDTWS 310 (450)
Q Consensus 240 -~~~Fs~~l~~~~~~~~~~G~l~fG~~~d----~~~~~~pl~~~---~~~~~v~l~~i~vg~-~~~~~~~~~~~~~~~~~ 310 (450)
+++||+||.+........|.|+||+.+. .++.|+|+... ..+|.|. ++|+|++ +.+..
T Consensus 139 ~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~~------------ 205 (340)
T 1wkr_A 139 PTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSILS------------ 205 (340)
T ss_dssp SSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEEE------------
T ss_pred CCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEccC------------
Confidence 4799999987532223458999995442 24568888433 6799999 9999998 77642
Q ss_pred CCceEEeccCceeecchHHHHHHHHHHHHHHhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCCceE
Q 044367 311 DAGVFIDSGTTLTWLVPSAYQTLRKEVEDLFQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVF 390 (450)
Q Consensus 311 ~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~ 390 (450)
...+||||||++++||++++++|.+++++.... ..+.+.++|.. ...+|+|+|+|+ |.+++|++++|+
T Consensus 206 ~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~-----~~g~~~~~C~~------~~~~p~i~f~f~-g~~~~i~~~~yi 273 (340)
T 1wkr_A 206 STAGIVDTGTTLTLIASDAFAKYKKATGAVADN-----NTGLLRLTTAQ------YANLQSLFFTIG-GQTFELTANAQI 273 (340)
T ss_dssp EEEEEECTTBCSEEECHHHHHHHHHHHTCEECT-----TTSSEEECHHH------HHTCCCEEEEET-TEEEEECTGGGB
T ss_pred CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcC-----CCCeEEeeccc------cccCCcEEEEEC-CEEEEEcHHHhc
Confidence 457999999999999999999998888655321 12234689975 257899999998 899999999999
Q ss_pred EEeC-------CCeEEE-EEEeCCCCCCCCCCceeeehhhhcceEEEEECCCCEEEEEcCCCCCcc
Q 044367 391 YQES-------SSVFCL-AVGPSDINGERFKDLSIIGMIAQQNYNVAYDLVSKQLYFQRIDCELLA 448 (450)
Q Consensus 391 ~~~~-------~~~~C~-~~~~~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~ 448 (450)
++.. ....|+ .+....... ..+..||||++|||++|+|||++++|||||+++|++.+
T Consensus 274 ~~~~~~~~~g~~~~~c~~~~~~~~~~~-~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 338 (340)
T 1wkr_A 274 WPRNLNTAIGGSASSVYLIVGDLGSDS-GEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTAT 338 (340)
T ss_dssp CCGGGGGGGTCCSSCEEBCEEECSSCT-TSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTCC
T ss_pred cccccccccCCCCceEEEEEecCCCCC-CCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCCC
Confidence 8643 123554 455432111 01135999999999999999999999999999998744
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=5.8e-40 Score=305.81 Aligned_cols=210 Identities=21% Similarity=0.351 Sum_probs=172.6
Q ss_pred cceEEEEEEECCCCceEEEEEECCCCceeEeCCCCC---CCCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeEe
Q 044367 96 VPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCE---QCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYNI 171 (450)
Q Consensus 96 ~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~---~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~~ 171 (450)
+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.. +.|||++|+|++. ..|.|.+
T Consensus 12 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~----------------~~~~~~i 75 (239)
T 1b5f_A 12 DTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKE----------------NGTFGAI 75 (239)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEE----------------EEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeee----------------CCcEEEE
Confidence 379999999999999999999999999999999997 4866 8999999999998 5789999
Q ss_pred eeCCCCccceeEEEEEEEeecCCCCceeeeeEEEEeEecCCC-CC-CCCcceeeecCCCCCCC---CcHHhh--h-cCce
Q 044367 172 RYTNGPDSQGTIGSEQFNFETSDEGKTFLYDVGFGCSHNNAH-FS-DEQFTGVFGLGPATSST---HSLVEK--V-GSKF 243 (450)
Q Consensus 172 ~Yg~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GIlGLg~~~~~~---~sl~~q--l-~~~F 243 (450)
.|++|+ ++|.+++|+|+|++ ..++++.|||+....+ .| ....+||||||+...+. .++++| + .++|
T Consensus 76 ~Yg~Gs-~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~qg~i~~~~F 149 (239)
T 1b5f_A 76 IYGTGS-ITGFFSQDSVTIGD-----LVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLNQGLVKERRF 149 (239)
T ss_dssp ECSSCE-EEEEEEEEEEEETT-----EEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHHTTCCSSSEE
T ss_pred EECCCc-EEEEEEEEEEEECC-----cEEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHHHCCCCCCCEE
Confidence 999998 59999999999998 8999999999987654 12 23589999999994331 124555 2 5799
Q ss_pred EEeecCCCCCCcccceEEecCCCcCc-----ceecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCCceEEec
Q 044367 244 SYCIGNLNYFEYAYNMLILGEGAILE-----GDSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAGVFIDS 318 (450)
Q Consensus 244 s~~l~~~~~~~~~~G~l~fG~~~d~~-----~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~~iiDS 318 (450)
|+||.+.... ...|.|+||+ .|++ +.|+|+ ...++|.|.+++|+|+++.+.+.. . ...+||||
T Consensus 150 S~~l~~~~~~-~~~G~l~fGg-~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~~~~~~~~~-----~----~~~aiiDT 217 (239)
T 1b5f_A 150 SFWLNRNVDE-EEGGELVFGG-LDPNHFRGDHTYVPV-TYQYYWQFGIGDVLIGDKSTGFCA-----P----GCQAFADS 217 (239)
T ss_dssp EEEECCSCSS-SCCEEEEETS-CCGGGEEEEEEEEEE-EEETTEEEEECCEEETTEECCTTT-----T----CEEEEECT
T ss_pred EEEEeCCCCC-CCCeEEEECC-cChhhccCceEEEEc-ccCCeEEEEeeEEEECCEEecccC-----C----CCEEEEec
Confidence 9999875321 2348999995 5544 456777 446899999999999998875431 1 56899999
Q ss_pred cCceeecchHHHHHHHHHHHH
Q 044367 319 GTTLTWLVPSAYQTLRKEVED 339 (450)
Q Consensus 319 GTt~~~lp~~~~~~l~~~~~~ 339 (450)
||++++||++++++|.+++++
T Consensus 218 GTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 218 GTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp TCSSEEECHHHHHHHHHHTTC
T ss_pred CcchhhCCHHHHHHHHHHhCC
Confidence 999999999999999998853
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=5e-35 Score=273.17 Aligned_cols=219 Identities=17% Similarity=0.218 Sum_probs=167.8
Q ss_pred eeeeeEEEEeEecCCC-CCC-CCcceeeecCCCCCC---CCcHHhhh-------cCceEEeecCCCCCCcccceEEecCC
Q 044367 198 TFLYDVGFGCSHNNAH-FSD-EQFTGVFGLGPATSS---THSLVEKV-------GSKFSYCIGNLNYFEYAYNMLILGEG 265 (450)
Q Consensus 198 ~~~~~~~fg~~~~~~~-~~~-~~~~GIlGLg~~~~~---~~sl~~ql-------~~~Fs~~l~~~~~~~~~~G~l~fG~~ 265 (450)
++++++.|||++...+ .|. ...+||||||++..+ ..++++|| .++||+||.+.... ...|+|+|| +
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~-~~~G~l~fG-g 80 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDA-QPGGELMLG-G 80 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTC-SSCEEEEET-S
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCC-CCCcEEEEC-C
Confidence 7899999999998865 333 358999999998433 12344454 57999999886432 124899999 4
Q ss_pred CcCcc-----eecccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCCceEEeccCceeecchHHHHHHHHHHHHH
Q 044367 266 AILEG-----DSTPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAGVFIDSGTTLTWLVPSAYQTLRKEVEDL 340 (450)
Q Consensus 266 ~d~~~-----~~~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~ 340 (450)
.|+++ .|+|+ ....+|+|.+++|+|+++.+... ....+||||||+++++|++++++|.+++++.
T Consensus 81 ~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~~~~~~~~----------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~ 149 (241)
T 1lya_B 81 TDSKYYKGSLSYLNV-TRKAYWQVHLDQVEVASGLTLCK----------EGCEAIVDTGTSLMVGPVDEVRELQKAIGAV 149 (241)
T ss_dssp CCGGGEEEEEEEEEC-SSBTTBEEEEEEEEETTSCEEST----------TCEEEEECTTCSSEEECHHHHHHHHHHHTCE
T ss_pred cCHHHcCCceEEEEC-ccccEEEEEEeEEEECCeeEecc----------CCCEEEEECCCccccCCHHHHHHHHHHhCCe
Confidence 55544 56666 45789999999999999764311 1568999999999999999999999998654
Q ss_pred HhccCCCCCCCCCccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEEEeCC--CeEEEE-EEeCCCCCCCCCCcee
Q 044367 341 FQGLLPSYPMDPAWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFYQESS--SVFCLA-VGPSDINGERFKDLSI 417 (450)
Q Consensus 341 ~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~~~~i 417 (450)
.. ..+.+.++|+. ...+|+|+|+|+ |.+++||+++|+++... +..|+. +...... ....+.||
T Consensus 150 ~~------~~g~~~~~C~~------~~~~p~i~f~f~-g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~-~~~~~~~i 215 (241)
T 1lya_B 150 PL------IQGEYMIPCEK------VSTLPAITLKLG-GKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIP-PPSGPLWI 215 (241)
T ss_dssp EE------ETTEEEEEGGG------GGGSCCEEEEET-TEEEEECTTTSEEEETTTTSSEEEESEEECCCC-TTTCCCEE
T ss_pred ec------cCCcEEEECCC------CccCCeEEEEEC-CEEEEECHHHhEEEccCCCCCeeEEEEEecccC-CCCCCeEE
Confidence 32 12334689986 357899999997 99999999999998764 468986 6654321 11124699
Q ss_pred eehhhhcceEEEEECCCCEEEEEcCC
Q 044367 418 IGMIAQQNYNVAYDLVSKQLYFQRID 443 (450)
Q Consensus 418 lG~~fl~~~yvvfD~~~~~iGfa~~~ 443 (450)
||++|||++|+|||++++|||||+++
T Consensus 216 lG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 216 LGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp ECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred echHHhcceEEEEECCCCEEEEEEcC
Confidence 99999999999999999999999874
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.87 E-value=1.2e-22 Score=160.39 Aligned_cols=80 Identities=29% Similarity=0.571 Sum_probs=74.9
Q ss_pred cceEEEEEEECCCCceEEEEEECCCCceeEeCCCCC----CCCC-CCCCCCCCCcceeecCCCCCCCCCCCCCCCCceeE
Q 044367 96 VPVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQPCE----QCGA-TTFDPSKSLTYATLPCDSSYCTNDCGGYPDECWYN 170 (450)
Q Consensus 96 ~~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~C~----~C~~-~~y~p~~SsT~~~~~c~~~~C~~~c~~~~~~~~~~ 170 (450)
+.+|+++|.||||||++.|+|||||+++||+|..|. .|.. +.|||++|+|++. ..|.|.
T Consensus 12 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~----------------~~~~~~ 75 (97)
T 1lya_A 12 DAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVK----------------NGTSFD 75 (97)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEE----------------EEEEEE
T ss_pred CCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCcee----------------CCCcEE
Confidence 379999999999999999999999999999999997 5876 8999999999998 578999
Q ss_pred eeeCCCCccceeEEEEEEEeec
Q 044367 171 IRYTNGPDSQGTIGSEQFNFET 192 (450)
Q Consensus 171 ~~Yg~gs~~~G~~~~D~v~~~~ 192 (450)
+.|++|+ +.|.+++|+|+|++
T Consensus 76 i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 76 IHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp EECSSCE-EEEEEEEEEEEESC
T ss_pred EEECCcE-EEEEEEEEEEEECC
Confidence 9999999 69999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.69 E-value=4.6e-17 Score=126.12 Aligned_cols=82 Identities=18% Similarity=0.335 Sum_probs=66.4
Q ss_pred CccccccCccCCcccCCCeEEEEecCCCEEEeCCCceEEEeCC--CeEEEE-EEeCCCCCCCCCCceeeehhhhcceEEE
Q 044367 353 AWHLCYSGNINRDLQGFPAMAFHFAGGADLVLDAESVFYQESS--SVFCLA-VGPSDINGERFKDLSIIGMIAQQNYNVA 429 (450)
Q Consensus 353 ~~~~C~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~yvv 429 (450)
+.++|.. ...+|+|+|+|+ |++++|++++|+++... ...|+. ++..... ..++.||||+.|||++|+|
T Consensus 3 y~v~C~~------~~~~P~i~f~~g-g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~--~~~~~~ILGd~Fl~~~y~v 73 (87)
T 1b5f_B 3 LQVDCNT------LSSMPNVSFTIG-GKKFGLTPEQYILKVGKGEATQCISGFTAMDAT--LLGPLWILGDVFMRPYHTV 73 (87)
T ss_dssp CEECGGG------GGGCCCEEEEET-TEEEEECHHHHEEEESCTTTCEEEESEEECCCB--SSSBEEEECHHHHTTEEEE
T ss_pred EEEECCC------CCcCCcEEEEEC-CEEEEECHHHhEEEccCCCCCEEEEEEEECCCC--CCCCeEEechHHhccEEEE
Confidence 4589975 357899999998 99999999999998654 468986 5554321 1125799999999999999
Q ss_pred EECCCCEEEEEcCC
Q 044367 430 YDLVSKQLYFQRID 443 (450)
Q Consensus 430 fD~~~~~iGfa~~~ 443 (450)
||.+++|||||+++
T Consensus 74 fD~~~~riGfA~~~ 87 (87)
T 1b5f_B 74 FDYGNLLVGFAEAA 87 (87)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EECCCCEEEEEEcC
Confidence 99999999999864
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.13 E-value=0.068 Score=44.50 Aligned_cols=29 Identities=31% Similarity=0.580 Sum_probs=26.0
Q ss_pred ceEEEEEEECCCCceEEEEEECCCCceeEeC
Q 044367 97 PVFYVNFSIGQPPVPQLAVLDTGSSLIWVKC 127 (450)
Q Consensus 97 ~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~ 127 (450)
+.+++++.|+ ++++++++|||++.+.+..
T Consensus 25 ~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 25 PMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 6799999998 5899999999999998864
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=93.51 E-value=0.074 Score=44.38 Aligned_cols=27 Identities=15% Similarity=0.208 Sum_probs=25.1
Q ss_pred eeeehhhhcceEEEEECCCCEEEEEcC
Q 044367 416 SIIGMIAQQNYNVAYDLVSKQLYFQRI 442 (450)
Q Consensus 416 ~ilG~~fl~~~yvvfD~~~~~iGfa~~ 442 (450)
.|||..||+.+-.+.|++++++-|...
T Consensus 109 ~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 109 MLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp EEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred eeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 899999999999999999999988654
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.30 E-value=0.33 Score=40.18 Aligned_cols=26 Identities=19% Similarity=0.195 Sum_probs=24.4
Q ss_pred eeeehhhhcceEEEEECCCCEEEEEc
Q 044367 416 SIIGMIAQQNYNVAYDLVSKQLYFQR 441 (450)
Q Consensus 416 ~ilG~~fl~~~yvvfD~~~~~iGfa~ 441 (450)
.|||..||+++-+..|+.++++-|..
T Consensus 110 ~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 110 VLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp EEECHHHHHHTTCEEETTTTEEEETT
T ss_pred eEecHHHHhhCCEEEECCCCEEEEcc
Confidence 89999999999999999999999864
No 41
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=89.30 E-value=0.37 Score=40.07 Aligned_cols=30 Identities=20% Similarity=0.439 Sum_probs=26.8
Q ss_pred ceEEEEEEECCCCceEEEEEECCCCceeEeCC
Q 044367 97 PVFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQ 128 (450)
Q Consensus 97 ~~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~ 128 (450)
..|++++.|. .+++++++|||++.+.+...
T Consensus 23 ~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 23 TMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred CEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 6799999998 59999999999999998764
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=84.11 E-value=1.3 Score=33.95 Aligned_cols=27 Identities=30% Similarity=0.327 Sum_probs=23.8
Q ss_pred EEEEEECCCCceEEEEEECCCCceeEeCC
Q 044367 100 YVNFSIGQPPVPQLAVLDTGSSLIWVKCQ 128 (450)
Q Consensus 100 ~~~i~iGtP~q~~~~~~DTGSs~~wv~~~ 128 (450)
++.|.|| .|.+.+++|||.+++-+...
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 5779999 59999999999999999754
No 43
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=83.78 E-value=1.1 Score=34.67 Aligned_cols=26 Identities=23% Similarity=0.178 Sum_probs=23.5
Q ss_pred EEEEEEECCCCceEEEEEECCCCceeEe
Q 044367 99 FYVNFSIGQPPVPQLAVLDTGSSLIWVK 126 (450)
Q Consensus 99 Y~~~i~iGtP~q~~~~~~DTGSs~~wv~ 126 (450)
-++.|.|| .|.+.+++|||.+++-+.
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 46789999 699999999999999997
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=81.30 E-value=1.5 Score=34.21 Aligned_cols=31 Identities=19% Similarity=0.277 Sum_probs=25.8
Q ss_pred EEEEEEC---CCCceEEEEEECCCCceeEeCCCC
Q 044367 100 YVNFSIG---QPPVPQLAVLDTGSSLIWVKCQPC 130 (450)
Q Consensus 100 ~~~i~iG---tP~q~~~~~~DTGSs~~wv~~~~C 130 (450)
.+.|.|| +|+|.+..++|||-+++.+....+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 5666776 789999999999999999986543
No 45
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=80.74 E-value=2 Score=32.75 Aligned_cols=27 Identities=30% Similarity=0.185 Sum_probs=23.8
Q ss_pred EEEEEECCCCceEEEEEECCCCceeEeCC
Q 044367 100 YVNFSIGQPPVPQLAVLDTGSSLIWVKCQ 128 (450)
Q Consensus 100 ~~~i~iGtP~q~~~~~~DTGSs~~wv~~~ 128 (450)
++.+.|| +|.+.+++|||.+++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 5779999 69999999999999999654
No 46
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=73.59 E-value=3.1 Score=32.72 Aligned_cols=27 Identities=19% Similarity=0.251 Sum_probs=23.1
Q ss_pred EEEEEEECCCCceEEEEEECCCCceeEeCC
Q 044367 99 FYVNFSIGQPPVPQLAVLDTGSSLIWVKCQ 128 (450)
Q Consensus 99 Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~ 128 (450)
=++ |.|| .|.+.+++|||.+++-+...
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 345 9999 69999999999999998754
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=67.92 E-value=5.6 Score=31.09 Aligned_cols=28 Identities=11% Similarity=0.198 Sum_probs=24.3
Q ss_pred EEEEEECCCCceEEEEEECCCCceeEeCCC
Q 044367 100 YVNFSIGQPPVPQLAVLDTGSSLIWVKCQP 129 (450)
Q Consensus 100 ~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~ 129 (450)
.+.+.|| .|.+.+++|||-+++-+....
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 5778999 699999999999999997653
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=57.97 E-value=12 Score=30.09 Aligned_cols=29 Identities=17% Similarity=0.230 Sum_probs=25.0
Q ss_pred eEEEEEEECCCCceEEEEEECCCCceeEeCC
Q 044367 98 VFYVNFSIGQPPVPQLAVLDTGSSLIWVKCQ 128 (450)
Q Consensus 98 ~Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~ 128 (450)
.-++.+.|+ .|.+.+++|||.+++-+...
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 467789999 59999999999999998754
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=51.90 E-value=13 Score=32.34 Aligned_cols=28 Identities=29% Similarity=0.251 Sum_probs=24.3
Q ss_pred EEEEEEECCCCceEEEEEECCCCceeEeCC
Q 044367 99 FYVNFSIGQPPVPQLAVLDTGSSLIWVKCQ 128 (450)
Q Consensus 99 Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~ 128 (450)
-.+.|.|| .|.+.+++|||.+++-+...
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEecc
Confidence 46789999 69999999999999998643
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=49.57 E-value=16 Score=28.96 Aligned_cols=21 Identities=24% Similarity=0.346 Sum_probs=17.9
Q ss_pred CceEEEEEECCCCceeEeCCC
Q 044367 109 PVPQLAVLDTGSSLIWVKCQP 129 (450)
Q Consensus 109 ~q~~~~~~DTGSs~~wv~~~~ 129 (450)
.|.+.+++|||-+++.+....
T Consensus 29 gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 29 SVYITALLDSGADITIISEED 49 (124)
T ss_dssp EEEEEEEECTTCSSCEEETTT
T ss_pred CEEEEEEecCCCCcEEEeccc
Confidence 477899999999999998653
No 51
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=45.87 E-value=19 Score=26.97 Aligned_cols=17 Identities=24% Similarity=0.499 Sum_probs=14.8
Q ss_pred CceEEeccCceeecchH
Q 044367 312 AGVFIDSGTTLTWLVPS 328 (450)
Q Consensus 312 ~~~iiDSGTt~~~lp~~ 328 (450)
..++||||++.+++|..
T Consensus 28 ~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 28 FTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEETTCCCEEEEBT
T ss_pred EEEEEeCCCCceEEeEc
Confidence 45999999999999964
No 52
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=30.70 E-value=43 Score=28.95 Aligned_cols=28 Identities=29% Similarity=0.251 Sum_probs=24.1
Q ss_pred EEEEEEECCCCceEEEEEECCCCceeEeCC
Q 044367 99 FYVNFSIGQPPVPQLAVLDTGSSLIWVKCQ 128 (450)
Q Consensus 99 Y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~ 128 (450)
=.+++.|| .|.+.+++|||-+++-+...
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeecc
Confidence 46889999 59999999999999998643
No 53
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=28.51 E-value=52 Score=28.96 Aligned_cols=32 Identities=22% Similarity=0.150 Sum_probs=24.0
Q ss_pred ceEEEE---EEECC-----CCceEEEEEECCCCceeEeCC
Q 044367 97 PVFYVN---FSIGQ-----PPVPQLAVLDTGSSLIWVKCQ 128 (450)
Q Consensus 97 ~~Y~~~---i~iGt-----P~q~~~~~~DTGSs~~wv~~~ 128 (450)
+.|.++ |.||. +.....++||||+++++++..
T Consensus 188 ~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 188 YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 567665 67875 234578999999999999853
No 54
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=26.77 E-value=63 Score=30.01 Aligned_cols=37 Identities=30% Similarity=0.515 Sum_probs=25.2
Q ss_pred cccccCCCceEEEEeeEEEC--CEEeecCCcccccCCCcCCCceEEeccCceeecchH
Q 044367 273 TPMSVIDGSYYVTLEGISLG--EKMLDIDPNLFKKNDTWSDAGVFIDSGTTLTWLVPS 328 (450)
Q Consensus 273 ~pl~~~~~~~~v~l~~i~vg--~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~ 328 (450)
.||......|.++ |.|| .+ ...++||||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGtP~q----------------~~~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 5 TTLINEGPSYAAD---IVVGSNQQ----------------KQTVVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEECSSSEEEE---EEETTTTE----------------EEEEEEETTCCCEEEEEE
T ss_pred EEEecCCcEEEEE---EEEcCCCc----------------EEEEEEcCCCCCEEEecC
Confidence 3453445567654 6777 33 345999999999999853
No 55
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=26.07 E-value=56 Score=30.35 Aligned_cols=39 Identities=28% Similarity=0.435 Sum_probs=25.5
Q ss_pred cccccCCCceEEEEeeEEECCEEeecCCcccccCCCcCCCceEEeccCceeecchH
Q 044367 273 TPMSVIDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAGVFIDSGTTLTWLVPS 328 (450)
Q Consensus 273 ~pl~~~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~ 328 (450)
.||.....+|.++ |.||.-.- ...++||||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGtP~Q--------------~~~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 5 LSLINEGPSYASK---VSVGSNKQ--------------QQTVIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEECSSSEEEE---EEETTTTE--------------EEEEEEETTCCCEEEEEE
T ss_pred eEEEcCCCEEEEE---EEEcCCCc--------------EEEEEEeCCCCceEEecC
Confidence 3454445677754 66773110 335999999999999853
No 56
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=25.69 E-value=61 Score=30.07 Aligned_cols=32 Identities=19% Similarity=0.331 Sum_probs=25.2
Q ss_pred ceEEEE---EEECC---CCceEEEEEECCCCceeEeCC
Q 044367 97 PVFYVN---FSIGQ---PPVPQLAVLDTGSSLIWVKCQ 128 (450)
Q Consensus 97 ~~Y~~~---i~iGt---P~q~~~~~~DTGSs~~wv~~~ 128 (450)
+.|.++ |.||. +.....++||||+++++++..
T Consensus 193 ~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 193 GFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp SSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred ceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 567666 57875 346789999999999999865
No 57
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=25.12 E-value=62 Score=30.12 Aligned_cols=16 Identities=31% Similarity=0.742 Sum_probs=14.2
Q ss_pred CceEEeccCceeecch
Q 044367 312 AGVFIDSGTTLTWLVP 327 (450)
Q Consensus 312 ~~~iiDSGTt~~~lp~ 327 (450)
..++||||++.+++|.
T Consensus 27 ~~v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 27 YSLLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEEETTCCCCEECS
T ss_pred EEEEEeCCChhheecC
Confidence 4599999999999985
No 58
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=23.56 E-value=73 Score=29.62 Aligned_cols=17 Identities=29% Similarity=0.665 Sum_probs=14.4
Q ss_pred CceEEeccCceeecchH
Q 044367 312 AGVFIDSGTTLTWLVPS 328 (450)
Q Consensus 312 ~~~iiDSGTt~~~lp~~ 328 (450)
..++||||++.+++|..
T Consensus 27 ~~v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 27 LNVIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEEEETTCCCEEEEEE
T ss_pred EEEEEeCCCCCeEEecC
Confidence 45999999999999843
No 59
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=21.80 E-value=76 Score=29.42 Aligned_cols=17 Identities=24% Similarity=0.583 Sum_probs=14.5
Q ss_pred CceEEeccCceeecchH
Q 044367 312 AGVFIDSGTTLTWLVPS 328 (450)
Q Consensus 312 ~~~iiDSGTt~~~lp~~ 328 (450)
..++||||++.+++|..
T Consensus 27 ~~v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 27 LNVIVDTGSSDLWVPDV 43 (342)
T ss_dssp EEEEEETTCCCEEEEEE
T ss_pred EEEEEECCCcceEEEcC
Confidence 45999999999999853
No 60
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=21.49 E-value=72 Score=29.45 Aligned_cols=33 Identities=18% Similarity=0.466 Sum_probs=24.0
Q ss_pred CCCceEEEEeeEEECCEEeecCCcccccCCCcCCCceEEeccCceeecchHH
Q 044367 278 IDGSYYVTLEGISLGEKMLDIDPNLFKKNDTWSDAGVFIDSGTTLTWLVPSA 329 (450)
Q Consensus 278 ~~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~ 329 (450)
....|.+ .|.||.+. ..++||||++.+++|..-
T Consensus 13 ~~~~Y~~---~i~iG~Q~----------------~~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 13 NDEEYIT---PVTIGGTT----------------LNLNFDTGSADLWVFSTE 45 (323)
T ss_dssp GGSCEEE---EEEETTEE----------------EEEEEETTCCCEEECBTT
T ss_pred CCCEEEE---EEEECCEE----------------EEEEEeCCCcceEEecCC
Confidence 3456664 47788443 359999999999999754
No 61
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=20.95 E-value=83 Score=27.46 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=23.9
Q ss_pred ceEEE---EEEECCC----CceEEEEEECCCCceeEeCC
Q 044367 97 PVFYV---NFSIGQP----PVPQLAVLDTGSSLIWVKCQ 128 (450)
Q Consensus 97 ~~Y~~---~i~iGtP----~q~~~~~~DTGSs~~wv~~~ 128 (450)
+.|.+ .|.||.- .....+++|||++.++++..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 55655 4668752 34578999999999999865
No 62
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=20.56 E-value=77 Score=29.26 Aligned_cols=18 Identities=28% Similarity=0.589 Sum_probs=15.5
Q ss_pred CceEEeccCceeecchHH
Q 044367 312 AGVFIDSGTTLTWLVPSA 329 (450)
Q Consensus 312 ~~~iiDSGTt~~~lp~~~ 329 (450)
..++||||++.+++|..-
T Consensus 28 ~~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 28 LGLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEEETTCCCEEECBTT
T ss_pred EEEEEcCCCcceEEecCC
Confidence 459999999999999754
Done!