BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044375
MNRNKKIVASAAIVIAIVSVIISINQTNTTLRNLFCAPCIEGSNNNLEGSRIIQVTGALG
PESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAVTTSQRCGCLLLAREKVSRE

High Scoring Gene Products

Symbol, full name Information P value
AT3G57030 protein from Arabidopsis thaliana 2.2e-18
AT3G57020 protein from Arabidopsis thaliana 1.4e-14
SSL2
strictosidine synthase-like 2
protein from Arabidopsis thaliana 2.5e-14
AT3G57010 protein from Arabidopsis thaliana 1.1e-13
SSL3
strictosidine synthase-like 3
protein from Arabidopsis thaliana 3.3e-11
AT5G22020 protein from Arabidopsis thaliana 4.4e-11
LAP3
LESS ADHERENT POLLEN 3
protein from Arabidopsis thaliana 1.5e-09
SSL1
strictosidine synthase-like 1
protein from Arabidopsis thaliana 3.1e-09
SS2
strictosidine synthase 2
protein from Arabidopsis thaliana 8.7e-05
SS3
strictosidine synthase 3
protein from Arabidopsis thaliana 0.00018

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044375
        (116 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2080575 - symbol:AT3G57030 species:3702 "Arabi...   225  2.2e-18   1
TAIR|locus:2080565 - symbol:AT3G57020 species:3702 "Arabi...   191  1.4e-14   1
TAIR|locus:2040312 - symbol:SSL2 "strictosidine synthase-...   189  2.5e-14   1
TAIR|locus:2080660 - symbol:AT3G57010 species:3702 "Arabi...   183  1.1e-13   1
TAIR|locus:2201841 - symbol:SSL3 "strictosidine synthase-...   161  3.3e-11   1
TAIR|locus:504956439 - symbol:AT5G22020 species:3702 "Ara...   160  4.4e-11   1
TAIR|locus:2097488 - symbol:LAP3 "LESS ADHERENT POLLEN 3"...   146  1.5e-09   1
TAIR|locus:2040297 - symbol:SSL1 "strictosidine synthase-...   143  3.1e-09   1
TAIR|locus:2031486 - symbol:SS2 "strictosidine synthase 2...   101  8.7e-05   1
TAIR|locus:2031511 - symbol:SS3 "strictosidine synthase 3...    98  0.00018   1


>TAIR|locus:2080575 [details] [associations]
            symbol:AT3G57030 species:3702 "Arabidopsis thaliana"
            [GO:0009058 "biosynthetic process" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0009821 "alkaloid biosynthetic
            process" evidence=ISS] [GO:0016844 "strictosidine synthase
            activity" evidence=IEA;ISS;TAS] [GO:0009505 "plant-type cell wall"
            evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] InterPro:IPR018119 Pfam:PF03088
            GO:GO:0005783 GO:GO:0005886 GO:GO:0009506 EMBL:CP002686
            GO:GO:0009058 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0009505
            OMA:NIRRNSN EMBL:BT023417 EMBL:BT026464 IPI:IPI00547919
            RefSeq:NP_191262.2 UniGene:At.27795 ProteinModelPortal:Q4V3D9
            PRIDE:Q4V3D9 EnsemblPlants:AT3G57030.1 GeneID:824870
            KEGG:ath:AT3G57030 TAIR:At3g57030 InParanoid:Q4V3D9
            PhylomeDB:Q4V3D9 ProtClustDB:CLSN2680430 Genevestigator:Q4V3D9
            Uniprot:Q4V3D9
        Length = 374

 Score = 225 (84.3 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 40/80 (50%), Positives = 57/80 (71%)

Query:    26 QTNTTLRNLFCAPCIEGSNNNLEGSRIIQVTGALGPESIAFDPNGDGPYTGVANGRILKW 85
             + + T   +F  P I GS +    ++++ +TGA GPESIAFDP G+GPY GV++GRILKW
Sbjct:    22 KNSQTGSGIFAPPEISGSRDVFPSAKVVNLTGASGPESIAFDPAGEGPYVGVSDGRILKW 81

Query:    86 QGDELGWTEFAVTTSQRCGC 105
             +G+ LGW++FA T+S R  C
Sbjct:    82 RGEPLGWSDFAHTSSNRQEC 101


>TAIR|locus:2080565 [details] [associations]
            symbol:AT3G57020 species:3702 "Arabidopsis thaliana"
            [GO:0009058 "biosynthetic process" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0009821 "alkaloid biosynthetic
            process" evidence=ISS] [GO:0016844 "strictosidine synthase
            activity" evidence=IEA;ISS;TAS] [GO:0005773 "vacuole" evidence=IDA]
            [GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009744
            "response to sucrose stimulus" evidence=RCA] [GO:0009813 "flavonoid
            biosynthetic process" evidence=RCA] [GO:0010224 "response to UV-B"
            evidence=RCA] InterPro:IPR018119 Pfam:PF03088 GO:GO:0005783
            GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009058
            Gene3D:2.120.10.30 InterPro:IPR011042 eggNOG:COG3386 EMBL:AL138655
            HOGENOM:HOG000223915 EMBL:AY039884 IPI:IPI00534859 PIR:T47762
            RefSeq:NP_191261.1 UniGene:At.1061 UniGene:At.67273
            UniGene:At.69547 ProteinModelPortal:Q9M1J6 SMR:Q9M1J6 STRING:Q9M1J6
            PaxDb:Q9M1J6 PRIDE:Q9M1J6 EnsemblPlants:AT3G57020.1 GeneID:824869
            KEGG:ath:AT3G57020 TAIR:At3g57020 InParanoid:Q9M1J6 OMA:SEAYERD
            PhylomeDB:Q9M1J6 ProtClustDB:CLSN2684530 Genevestigator:Q9M1J6
            Uniprot:Q9M1J6
        Length = 370

 Score = 191 (72.3 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 35/66 (53%), Positives = 46/66 (69%)

Query:    40 IEGSNNNLEGSRIIQVTGALGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAVTT 99
             +EG+ N L  ++ I +  A GPESI FDP G+GPY  V +GRILKW+GD+LGW +FA T+
Sbjct:    34 LEGAKNVLTMAKTIPIPVA-GPESIEFDPKGEGPYAAVVDGRILKWRGDDLGWVDFAYTS 92

Query:   100 SQRCGC 105
               R  C
Sbjct:    93 PHRGNC 98


>TAIR|locus:2040312 [details] [associations]
            symbol:SSL2 "strictosidine synthase-like 2" species:3702
            "Arabidopsis thaliana" [GO:0005576 "extracellular region"
            evidence=ISM] [GO:0009058 "biosynthetic process" evidence=IEA]
            [GO:0009821 "alkaloid biosynthetic process" evidence=ISS]
            [GO:0016844 "strictosidine synthase activity" evidence=IEA;ISS;TAS]
            [GO:0010264 "myo-inositol hexakisphosphate biosynthetic process"
            evidence=RCA] InterPro:IPR018119 Pfam:PF03088 GO:GO:0009058
            EMBL:CP002685 Gene3D:2.120.10.30 InterPro:IPR011042 EMBL:AC005662
            EMBL:BT015732 EMBL:BT020191 IPI:IPI00521124 PIR:A84840
            RefSeq:NP_181661.1 UniGene:At.42854 ProteinModelPortal:Q9SLG8
            PRIDE:Q9SLG8 EnsemblPlants:AT2G41290.1 GeneID:818728
            KEGG:ath:AT2G41290 TAIR:At2g41290 InParanoid:Q9SLG8 OMA:WISISEV
            PhylomeDB:Q9SLG8 ProtClustDB:CLSN2716685 ArrayExpress:Q9SLG8
            Genevestigator:Q9SLG8 Uniprot:Q9SLG8
        Length = 376

 Score = 189 (71.6 bits), Expect = 2.5e-14, P = 2.5e-14
 Identities = 35/55 (63%), Positives = 42/55 (76%)

Query:    51 RIIQVTGALGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAVTTSQRCGC 105
             R+I  TGALGPES  FD  GDGPYTG+++GRI+KW  +E  W +FAVTTS R GC
Sbjct:    42 RLIPTTGALGPESFVFDFFGDGPYTGLSDGRIVKWLANESRWIDFAVTTSAREGC 96


>TAIR|locus:2080660 [details] [associations]
            symbol:AT3G57010 species:3702 "Arabidopsis thaliana"
            [GO:0009058 "biosynthetic process" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0009821 "alkaloid biosynthetic
            process" evidence=ISS] [GO:0016844 "strictosidine synthase
            activity" evidence=IEA;ISS;TAS] [GO:0005783 "endoplasmic reticulum"
            evidence=IDA] [GO:0016132 "brassinosteroid biosynthetic process"
            evidence=RCA] InterPro:IPR018119 Pfam:PF03088 GO:GO:0005783
            EMBL:CP002686 GO:GO:0009058 Gene3D:2.120.10.30 InterPro:IPR011042
            EMBL:AL138655 ProtClustDB:CLSN2684530 EMBL:AY142495 IPI:IPI00526825
            PIR:T47761 RefSeq:NP_191260.1 UniGene:At.25199
            ProteinModelPortal:Q9M1J7 SMR:Q9M1J7 IntAct:Q9M1J7 PRIDE:Q9M1J7
            EnsemblPlants:AT3G57010.1 GeneID:824868 KEGG:ath:AT3G57010
            TAIR:At3g57010 InParanoid:Q9M1J7 OMA:NICHRIW PhylomeDB:Q9M1J7
            Genevestigator:Q9M1J7 Uniprot:Q9M1J7
        Length = 376

 Score = 183 (69.5 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 32/66 (48%), Positives = 47/66 (71%)

Query:    40 IEGSNNNLEGSRIIQVTGALGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAVTT 99
             ++G+ + L+ ++ I +    GPES+ FDP G+GPY GV +GRILKW+G+ELGW +FA T+
Sbjct:    35 LKGTKHVLQDAKTIPLP-VDGPESLEFDPQGEGPYVGVTDGRILKWRGEELGWVDFAYTS 93

Query:   100 SQRCGC 105
               R  C
Sbjct:    94 PHRDNC 99


>TAIR|locus:2201841 [details] [associations]
            symbol:SSL3 "strictosidine synthase-like 3" species:3702
            "Arabidopsis thaliana" [GO:0009058 "biosynthetic process"
            evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0009821
            "alkaloid biosynthetic process" evidence=ISS] [GO:0016844
            "strictosidine synthase activity" evidence=IEA;ISS;TAS] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0005774 "vacuolar
            membrane" evidence=IDA] InterPro:IPR018119 Pfam:PF03088
            GO:GO:0005783 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005774
            GO:GO:0009058 Gene3D:2.120.10.30 InterPro:IPR011042 eggNOG:COG3386
            HOGENOM:HOG000223915 EMBL:AF419594 EMBL:AY064047 EMBL:AY117314
            IPI:IPI00534450 RefSeq:NP_563818.1 UniGene:At.16363
            ProteinModelPortal:Q8VWF6 SMR:Q8VWF6 PaxDb:Q8VWF6 PRIDE:Q8VWF6
            EnsemblPlants:AT1G08470.1 GeneID:837368 KEGG:ath:AT1G08470
            TAIR:At1g08470 InParanoid:Q8VWF6 OMA:FMQLVFS PhylomeDB:Q8VWF6
            ProtClustDB:CLSN2687729 ArrayExpress:Q8VWF6 Genevestigator:Q8VWF6
            Uniprot:Q8VWF6
        Length = 390

 Score = 161 (61.7 bits), Expect = 3.3e-11, P = 3.3e-11
 Identities = 33/58 (56%), Positives = 39/58 (67%)

Query:    45 NNLEGSRIIQVTGALGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAVTTSQR 102
             N L+ S I  +    GPESIAFDP G GPYTGVA+GRIL W G    WT+FA T++ R
Sbjct:    54 NLLQNSEIRFLNEVQGPESIAFDPQGRGPYTGVADGRILFWNGTR--WTDFAYTSNNR 109


>TAIR|locus:504956439 [details] [associations]
            symbol:AT5G22020 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0009058
            "biosynthetic process" evidence=IEA] [GO:0009821 "alkaloid
            biosynthetic process" evidence=ISS] [GO:0016844 "strictosidine
            synthase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
            reticulum" evidence=IDA] InterPro:IPR018119 Pfam:PF03088
            GO:GO:0005783 EMBL:CP002688 GO:GO:0009058 Gene3D:2.120.10.30
            InterPro:IPR011042 GO:GO:0016844 EMBL:AL589883 HOGENOM:HOG000223915
            ProtClustDB:CLSN2687729 EMBL:BT014895 EMBL:BT025622 IPI:IPI00517499
            RefSeq:NP_680189.1 UniGene:At.10335 UniGene:At.23750
            ProteinModelPortal:Q9C586 SMR:Q9C586 PRIDE:Q9C586
            EnsemblPlants:AT5G22020.1 GeneID:832262 KEGG:ath:AT5G22020
            TAIR:At5g22020 InParanoid:Q9C586 OMA:ITARTHY PhylomeDB:Q9C586
            Genevestigator:Q9C586 Uniprot:Q9C586
        Length = 395

 Score = 160 (61.4 bits), Expect = 4.4e-11, P = 4.4e-11
 Identities = 32/65 (49%), Positives = 43/65 (66%)

Query:    38 PCIEGSNNNLEGSRIIQVTGALGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAV 97
             P    S N+L+ S+I+      GPES+AFD  G GPYTGVA+GR+L W G++  W +FA 
Sbjct:    53 PWERDSQNSLQKSKILFFNQIQGPESVAFDSLGRGPYTGVADGRVLFWDGEK--WIDFAY 110

Query:    98 TTSQR 102
             T+S R
Sbjct:   111 TSSNR 115


>TAIR|locus:2097488 [details] [associations]
            symbol:LAP3 "LESS ADHERENT POLLEN 3" species:3702
            "Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
            [GO:0009058 "biosynthetic process" evidence=IEA] [GO:0009821
            "alkaloid biosynthetic process" evidence=ISS] [GO:0010584 "pollen
            exine formation" evidence=RCA;IMP] [GO:0016844 "strictosidine
            synthase activity" evidence=IEA;ISS;TAS] [GO:0009827 "plant-type
            cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
            growth" evidence=RCA] InterPro:IPR018119 Pfam:PF03088 EMBL:CP002686
            GO:GO:0009058 Gene3D:2.120.10.30 InterPro:IPR011042 EMBL:AL138659
            OMA:DIHRNGS IPI:IPI00528159 PIR:T49294 RefSeq:NP_191512.1
            RefSeq:NP_974462.1 UniGene:At.43215 UniGene:At.50291
            ProteinModelPortal:Q9M1B4 SMR:Q9M1B4 PRIDE:Q9M1B4
            EnsemblPlants:AT3G59530.1 EnsemblPlants:AT3G59530.2 GeneID:825122
            KEGG:ath:AT3G59530 TAIR:At3g59530 InParanoid:Q9M1B4
            PhylomeDB:Q9M1B4 ProtClustDB:CLSN2684895 Genevestigator:Q9M1B4
            Uniprot:Q9M1B4
        Length = 403

 Score = 146 (56.5 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 24/47 (51%), Positives = 34/47 (72%)

Query:    55 VTGALGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAVTTSQ 101
             V    GPES+ FD  G GPYTG+A+GR+++W G+ +GW  F+V TS+
Sbjct:    79 VDQVFGPESLEFDSLGRGPYTGLADGRVVRWMGEAIGWETFSVVTSK 125


>TAIR|locus:2040297 [details] [associations]
            symbol:SSL1 "strictosidine synthase-like 1" species:3702
            "Arabidopsis thaliana" [GO:0005576 "extracellular region"
            evidence=ISM] [GO:0009058 "biosynthetic process" evidence=IEA]
            [GO:0009821 "alkaloid biosynthetic process" evidence=ISS]
            [GO:0016844 "strictosidine synthase activity" evidence=IEA;ISS;TAS]
            InterPro:IPR018119 Pfam:PF03088 GO:GO:0009058 EMBL:CP002685
            Gene3D:2.120.10.30 InterPro:IPR011042 IPI:IPI00532851
            RefSeq:NP_181662.3 UniGene:At.42851 ProteinModelPortal:F4IJZ6
            PRIDE:F4IJZ6 EnsemblPlants:AT2G41300.1 GeneID:818729
            KEGG:ath:AT2G41300 OMA:ISEVQER ArrayExpress:F4IJZ6 Uniprot:F4IJZ6
        Length = 394

 Score = 143 (55.4 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 23/39 (58%), Positives = 29/39 (74%)

Query:    67 DPNGDGPYTGVANGRILKWQGDELGWTEFAVTTSQRCGC 105
             DP G+GPY GV +GRILKW G++LGW EFA ++  R  C
Sbjct:    85 DPRGEGPYVGVTDGRILKWSGEDLGWIEFAYSSPHRKNC 123


>TAIR|locus:2031486 [details] [associations]
            symbol:SS2 "strictosidine synthase 2" species:3702
            "Arabidopsis thaliana" [GO:0009058 "biosynthetic process"
            evidence=IEA] [GO:0016844 "strictosidine synthase activity"
            evidence=IEA;TAS] [GO:0005773 "vacuole" evidence=IDA] [GO:0009611
            "response to wounding" evidence=IEP] [GO:0009753 "response to
            jasmonic acid stimulus" evidence=IEP] [GO:0005774 "vacuolar
            membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
            apparatus" evidence=IDA] [GO:0010167 "response to nitrate"
            evidence=RCA] [GO:0010260 "organ senescence" evidence=RCA]
            [GO:0015706 "nitrate transport" evidence=RCA] UniPathway:UPA00311
            InterPro:IPR018119 Pfam:PF03088 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005794
            GO:GO:0005774 GO:GO:0009058 GO:GO:0009753 GO:GO:0009611
            Gene3D:2.120.10.30 InterPro:IPR011042 eggNOG:COG3386 GO:GO:0016844
            EMBL:AC016662 GO:GO:0009820 EMBL:U43945 EMBL:U43713 EMBL:AY034970
            EMBL:AY062976 IPI:IPI00544988 PIR:A96768 RefSeq:NP_177542.1
            UniGene:At.24431 UniGene:At.74858 ProteinModelPortal:P94111
            SMR:P94111 STRING:P94111 PaxDb:P94111 PRIDE:P94111
            EnsemblPlants:AT1G74020.1 GeneID:843740 KEGG:ath:AT1G74020
            TAIR:At1g74020 HOGENOM:HOG000223915 InParanoid:P94111 KO:K01757
            OMA:ESSNSSW PhylomeDB:P94111 ProtClustDB:CLSN2682194
            Genevestigator:P94111 GermOnline:AT1G74020 Uniprot:P94111
        Length = 335

 Score = 101 (40.6 bits), Expect = 8.7e-05, P = 8.7e-05
 Identities = 21/40 (52%), Positives = 27/40 (67%)

Query:    60 GPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAVTT 99
             GPE+ AFD  G G YTGV+ G+ILK+   E G+ +FA  T
Sbjct:    38 GPEAFAFDSTGKGFYTGVSGGKILKYL-PETGYVDFAQIT 76


>TAIR|locus:2031511 [details] [associations]
            symbol:SS3 "strictosidine synthase 3" species:3702
            "Arabidopsis thaliana" [GO:0009058 "biosynthetic process"
            evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016844
            "strictosidine synthase activity" evidence=IEA;ISS;TAS] [GO:0005618
            "cell wall" evidence=IDA] [GO:0009505 "plant-type cell wall"
            evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
            UniPathway:UPA00311 InterPro:IPR018119 Pfam:PF03088 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005773 GO:GO:0009058
            Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0009505 eggNOG:COG3386
            GO:GO:0016844 EMBL:AC016662 GO:GO:0009820 UniGene:At.18213
            HOGENOM:HOG000223915 KO:K01757 ProtClustDB:CLSN2682194 EMBL:U43946
            IPI:IPI00537671 PIR:G96767 RefSeq:NP_177540.3
            ProteinModelPortal:P92976 SMR:P92976 STRING:P92976 PaxDb:P92976
            PRIDE:P92976 EnsemblPlants:AT1G74000.1 GeneID:843738
            KEGG:ath:AT1G74000 TAIR:At1g74000 InParanoid:P92976 OMA:DFAQITN
            PhylomeDB:P92976 Genevestigator:P92976 GermOnline:AT1G74000
            Uniprot:P92976
        Length = 329

 Score = 98 (39.6 bits), Expect = 0.00018, P = 0.00018
 Identities = 21/44 (47%), Positives = 29/44 (65%)

Query:    60 GPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFA-VTTSQR 102
             GPE+ AFD  G G YTGV  G+ILK+   + G+ +FA +T S +
Sbjct:    40 GPEAFAFDSTGKGFYTGVTGGKILKYLPKK-GYVDFAQITNSSK 82


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.134   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      116        98   0.00091  102 3  11 22  0.43    30
                                                     29  0.45    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  543 (58 KB)
  Total size of DFA:  118 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.13u 0.06s 10.19t   Elapsed:  00:00:13
  Total cpu time:  10.13u 0.06s 10.19t   Elapsed:  00:00:13
  Start:  Mon May 20 14:53:56 2013   End:  Mon May 20 14:54:09 2013

Back to top