Query 044375
Match_columns 116
No_of_seqs 118 out of 238
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 04:06:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044375.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044375hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 97.8 4.4E-05 1.5E-09 57.4 6.5 54 48-101 7-61 (322)
2 3sre_A PON1, serum paraoxonase 97.5 0.00012 4.2E-09 59.5 6.0 52 46-99 38-104 (355)
3 1pjx_A Dfpase, DIISOPROPYLFLUO 95.9 0.016 5.4E-07 41.8 5.6 42 55-97 14-63 (314)
4 3a9g_A Putative uncharacterize 94.8 0.052 1.8E-06 42.7 5.8 33 57-90 133-179 (354)
5 3e5z_A Putative gluconolactona 94.7 0.07 2.4E-06 38.7 5.9 36 58-95 217-252 (296)
6 1rwi_B Serine/threonine-protei 94.5 0.063 2.2E-06 37.8 5.3 37 56-93 64-100 (270)
7 2ism_A Putative oxidoreductase 94.5 0.044 1.5E-06 42.8 4.8 32 57-89 133-178 (352)
8 3e5z_A Putative gluconolactona 94.3 0.067 2.3E-06 38.8 5.1 45 51-97 21-66 (296)
9 2dg1_A DRP35, lactonase; beta 94.2 0.075 2.6E-06 38.9 5.2 39 57-96 43-82 (333)
10 3a9g_A Putative uncharacterize 94.1 0.038 1.3E-06 43.5 3.7 44 50-97 21-64 (354)
11 2g8s_A Glucose/sorbosone dehyd 93.6 0.081 2.8E-06 41.4 4.6 31 59-90 130-174 (353)
12 2ism_A Putative oxidoreductase 93.6 0.11 3.7E-06 40.6 5.3 43 50-96 23-65 (352)
13 1cru_A Protein (soluble quinop 93.5 0.07 2.4E-06 43.8 4.4 33 57-90 142-207 (454)
14 1rwi_B Serine/threonine-protei 93.4 0.098 3.3E-06 36.8 4.4 31 60-91 25-57 (270)
15 1tl2_A L10, protein (tachylect 93.3 0.095 3.2E-06 41.4 4.6 38 50-89 79-116 (236)
16 3das_A Putative oxidoreductase 93.1 0.14 4.9E-06 41.3 5.5 51 46-97 123-199 (347)
17 2z2n_A Virginiamycin B lyase; 92.7 0.19 6.6E-06 35.3 5.1 39 57-97 13-52 (299)
18 2p4o_A Hypothetical protein; p 92.2 0.42 1.4E-05 35.5 6.6 36 59-96 32-68 (306)
19 1q7f_A NHL, brain tumor CG1071 91.9 0.16 5.4E-06 36.4 3.9 39 56-95 27-66 (286)
20 2qc5_A Streptogramin B lactona 91.7 0.32 1.1E-05 34.2 5.2 38 57-96 18-56 (300)
21 3vgz_A Uncharacterized protein 91.7 0.27 9.2E-06 35.5 4.9 33 59-91 41-80 (353)
22 2p9w_A MAL S 1 allergenic prot 91.4 0.24 8.1E-06 40.5 4.9 42 59-101 137-180 (334)
23 3dr2_A Exported gluconolactona 90.5 0.33 1.1E-05 35.7 4.6 35 59-95 239-273 (305)
24 3g4e_A Regucalcin; six bladed 90.4 0.41 1.4E-05 35.2 4.9 34 59-93 199-233 (297)
25 1cru_A Protein (soluble quinop 90.2 0.54 1.9E-05 38.4 6.0 46 50-97 19-65 (454)
26 3das_A Putative oxidoreductase 90.0 0.45 1.5E-05 38.3 5.3 45 49-95 23-68 (347)
27 3fvz_A Peptidyl-glycine alpha- 89.9 0.28 9.6E-06 36.6 3.8 34 56-90 88-122 (329)
28 3hrp_A Uncharacterized protein 89.7 0.59 2E-05 37.0 5.7 39 57-96 217-256 (409)
29 2wg3_C Hedgehog-interacting pr 89.6 0.33 1.1E-05 40.3 4.3 32 58-90 138-187 (463)
30 3fvz_A Peptidyl-glycine alpha- 89.4 0.72 2.5E-05 34.4 5.7 39 57-96 141-182 (329)
31 2z2n_A Virginiamycin B lyase; 89.3 0.46 1.6E-05 33.4 4.3 37 58-96 56-93 (299)
32 2g8s_A Glucose/sorbosone dehyd 89.0 0.26 8.8E-06 38.5 3.0 33 57-89 16-48 (353)
33 1q7f_A NHL, brain tumor CG1071 88.9 0.56 1.9E-05 33.5 4.5 39 56-95 118-157 (286)
34 1tl2_A L10, protein (tachylect 88.9 0.37 1.3E-05 38.0 3.9 49 39-89 20-69 (236)
35 2fp8_A Strictosidine synthase; 88.8 0.4 1.4E-05 35.6 3.8 37 59-96 229-276 (322)
36 3qqz_A Putative uncharacterize 88.8 0.29 1E-05 37.8 3.2 31 58-89 223-253 (255)
37 4aow_A Guanine nucleotide-bind 88.6 0.3 1E-05 34.9 2.9 27 62-88 310-336 (340)
38 3f3f_A Nucleoporin SEH1; struc 88.4 0.74 2.5E-05 32.2 4.8 38 60-97 308-346 (351)
39 1pby_B Quinohemoprotein amine 87.9 0.86 2.9E-05 32.3 5.0 32 59-90 280-311 (337)
40 3hfq_A Uncharacterized protein 87.3 0.56 1.9E-05 34.3 3.8 36 58-94 39-77 (347)
41 2qc5_A Streptogramin B lactona 87.2 0.91 3.1E-05 31.8 4.7 38 58-97 61-99 (300)
42 4ggc_A P55CDC, cell division c 86.6 0.5 1.7E-05 33.4 3.1 27 62-88 288-314 (318)
43 1ijq_A LDL receptor, low-densi 86.2 2 6.8E-05 32.4 6.5 42 56-97 74-116 (316)
44 2p4o_A Hypothetical protein; p 86.1 0.74 2.5E-05 34.1 3.9 30 59-89 212-242 (306)
45 2dg1_A DRP35, lactonase; beta 86.1 0.82 2.8E-05 33.2 4.1 36 59-95 233-269 (333)
46 3dr2_A Exported gluconolactona 85.9 1.2 4E-05 32.8 4.9 49 49-99 36-85 (305)
47 1npe_A Nidogen, entactin; glyc 85.8 1.7 5.8E-05 31.1 5.6 40 57-96 120-162 (267)
48 3frx_A Guanine nucleotide-bind 85.4 0.55 1.9E-05 34.7 2.9 26 62-87 290-315 (319)
49 3vgz_A Uncharacterized protein 85.3 0.72 2.5E-05 33.2 3.4 32 59-90 185-216 (353)
50 1ri6_A Putative isomerase YBHE 85.1 1.8 6.2E-05 30.7 5.4 38 60-97 278-318 (343)
51 3scy_A Hypothetical bacterial 84.6 1.2 4.1E-05 32.9 4.4 38 55-92 207-245 (361)
52 1pjx_A Dfpase, DIISOPROPYLFLUO 84.4 1.7 5.7E-05 31.0 5.0 34 59-94 117-166 (314)
53 1ri6_A Putative isomerase YBHE 84.1 1.9 6.5E-05 30.6 5.1 37 58-94 37-76 (343)
54 3hfq_A Uncharacterized protein 83.9 2.6 9E-05 30.7 6.0 35 59-93 286-323 (347)
55 1ijq_A LDL receptor, low-densi 83.5 2.1 7.3E-05 32.3 5.5 41 56-96 117-159 (316)
56 1npe_A Nidogen, entactin; glyc 83.3 2.8 9.7E-05 29.9 5.9 40 56-95 76-116 (267)
57 3hrp_A Uncharacterized protein 83.3 1.2 4.3E-05 35.1 4.3 41 57-98 129-170 (409)
58 1jmx_B Amine dehydrogenase; ox 83.2 1.4 4.7E-05 31.5 4.1 31 59-89 295-325 (349)
59 2xzm_R RACK1; ribosome, transl 83.2 0.93 3.2E-05 33.6 3.3 26 62-87 313-338 (343)
60 3g4e_A Regucalcin; six bladed 83.0 1.8 6E-05 31.7 4.8 38 59-98 54-91 (297)
61 4hw6_A Hypothetical protein, I 82.8 1.4 4.6E-05 35.6 4.4 39 57-96 137-178 (433)
62 4aow_A Guanine nucleotide-bind 82.6 1.1 3.9E-05 31.8 3.5 28 62-89 219-246 (340)
63 1pby_B Quinohemoprotein amine 82.4 2.9 9.9E-05 29.5 5.5 31 60-90 83-125 (337)
64 2qe8_A Uncharacterized protein 82.3 1.7 5.7E-05 32.8 4.5 37 60-97 249-286 (343)
65 2pm7_B Protein transport prote 82.3 1.1 3.9E-05 32.5 3.5 27 62-88 13-39 (297)
66 2ymu_A WD-40 repeat protein; u 81.6 1.5 5.1E-05 34.2 4.1 29 62-90 20-48 (577)
67 3iz6_a 40S ribosomal protein R 81.1 1.2 4.1E-05 33.7 3.3 28 62-89 348-375 (380)
68 4ggc_A P55CDC, cell division c 81.0 1.5 5.1E-05 30.9 3.6 27 63-89 72-98 (318)
69 2ynn_A Coatomer subunit beta'; 81.0 1.4 4.9E-05 32.1 3.6 30 60-89 15-44 (304)
70 3jrp_A Fusion protein of prote 80.4 1.8 6.2E-05 31.1 3.9 39 60-98 258-297 (379)
71 3mmy_A MRNA export factor; mRN 80.3 1.7 5.8E-05 31.0 3.7 30 60-89 275-304 (368)
72 3bg1_A Protein SEC13 homolog; 79.8 3 0.0001 30.5 5.1 37 62-98 266-303 (316)
73 3scy_A Hypothetical bacterial 79.6 3.6 0.00012 30.2 5.4 29 57-85 48-80 (361)
74 4gga_A P55CDC, cell division c 79.5 1.3 4.5E-05 33.8 3.1 26 62-87 368-393 (420)
75 2oiz_A Aromatic amine dehydrog 79.5 1.9 6.5E-05 33.0 4.0 34 52-89 301-334 (361)
76 3f3f_A Nucleoporin SEH1; struc 79.3 1.5 5.1E-05 30.6 3.1 29 60-88 13-41 (351)
77 1jmx_B Amine dehydrogenase; ox 79.2 1.9 6.6E-05 30.7 3.7 30 60-89 93-134 (349)
78 3u4y_A Uncharacterized protein 79.1 2.3 8E-05 30.4 4.2 33 58-91 40-73 (331)
79 3v64_C Agrin; beta propeller, 79.0 4.8 0.00016 31.0 6.2 44 52-95 109-153 (349)
80 4ery_A WD repeat-containing pr 79.0 2.5 8.4E-05 30.3 4.3 32 60-91 25-56 (312)
81 3k26_A Polycomb protein EED; W 78.8 1.5 5.3E-05 31.3 3.1 28 60-87 337-364 (366)
82 3v64_C Agrin; beta propeller, 78.8 3.2 0.00011 32.0 5.1 43 53-95 153-197 (349)
83 3fm0_A Protein CIAO1; WDR39,SG 78.8 1.3 4.4E-05 33.0 2.8 31 63-93 21-51 (345)
84 2pm7_B Protein transport prote 78.7 2.3 7.9E-05 30.8 4.1 33 62-94 258-291 (297)
85 3zwl_B Eukaryotic translation 78.6 2.8 9.6E-05 29.8 4.4 30 60-89 34-63 (369)
86 2ghs_A AGR_C_1268P; regucalcin 78.5 2.3 7.7E-05 31.9 4.1 31 59-90 230-261 (326)
87 3v65_B Low-density lipoprotein 78.3 4.8 0.00016 31.4 6.1 44 53-96 196-241 (386)
88 1yfq_A Cell cycle arrest prote 78.1 2.2 7.4E-05 30.5 3.7 30 60-89 253-282 (342)
89 3dw8_B Serine/threonine-protei 78.0 3 0.0001 31.1 4.6 31 64-94 348-378 (447)
90 4gga_A P55CDC, cell division c 77.6 1.9 6.4E-05 32.9 3.4 28 62-89 151-178 (420)
91 4a0p_A LRP6, LRP-6, low-densit 77.4 2.8 9.5E-05 35.7 4.8 48 51-98 29-77 (628)
92 2wg3_C Hedgehog-interacting pr 77.3 1.7 5.8E-05 36.0 3.3 29 59-88 336-372 (463)
93 3jrp_A Fusion protein of prote 77.2 2.8 9.4E-05 30.1 4.1 33 61-93 14-46 (379)
94 4a11_B DNA excision repair pro 77.1 1.7 5.7E-05 31.6 2.9 29 61-89 337-365 (408)
95 2ghs_A AGR_C_1268P; regucalcin 77.0 2.8 9.5E-05 31.4 4.2 47 49-95 39-86 (326)
96 3dsm_A Uncharacterized protein 77.0 2.6 9.1E-05 31.5 4.1 35 57-92 82-117 (328)
97 1mda_H Methylamine dehydrogena 76.9 5.2 0.00018 31.9 6.0 69 19-90 13-106 (368)
98 1gxr_A ESG1, transducin-like e 76.9 4.6 0.00016 28.4 5.1 32 60-91 99-130 (337)
99 3dsm_A Uncharacterized protein 76.8 4.2 0.00014 30.4 5.1 33 58-90 266-303 (328)
100 3iz6_a 40S ribosomal protein R 76.5 2.4 8.3E-05 31.9 3.8 28 62-89 70-97 (380)
101 4hw6_A Hypothetical protein, I 76.5 3.1 0.00011 33.4 4.6 35 57-92 226-262 (433)
102 4h5i_A Guanine nucleotide-exch 76.4 2.2 7.4E-05 32.4 3.5 30 60-89 271-300 (365)
103 2pbi_B Guanine nucleotide-bind 76.2 3 0.0001 31.3 4.2 29 61-89 67-95 (354)
104 3v65_B Low-density lipoprotein 76.1 5.8 0.0002 31.0 6.0 43 53-95 153-196 (386)
105 3hxj_A Pyrrolo-quinoline quino 75.9 2.8 9.5E-05 30.0 3.8 29 61-90 217-245 (330)
106 2j04_A TAU60, YPL007P, hypothe 75.9 2.3 7.7E-05 37.2 3.8 30 61-90 132-161 (588)
107 1k8k_C P40, ARP2/3 complex 41 75.8 2.8 9.5E-05 30.2 3.8 32 60-91 10-41 (372)
108 3bws_A Protein LP49; two-domai 75.7 2.5 8.6E-05 31.5 3.6 32 58-89 344-390 (433)
109 1got_B GT-beta; complex (GTP-b 75.5 2.7 9.4E-05 31.0 3.8 29 61-89 58-86 (340)
110 2ynn_A Coatomer subunit beta'; 75.4 4.4 0.00015 29.4 4.8 28 62-89 232-259 (304)
111 3zwl_B Eukaryotic translation 75.2 2.2 7.7E-05 30.3 3.1 30 60-89 317-346 (369)
112 2xzm_R RACK1; ribosome, transl 74.8 2.2 7.6E-05 31.5 3.1 28 60-87 215-242 (343)
113 3dw8_B Serine/threonine-protei 74.8 2.2 7.6E-05 31.8 3.1 28 62-89 32-59 (447)
114 4g56_B MGC81050 protein; prote 74.8 2.3 7.9E-05 32.1 3.3 28 62-89 315-343 (357)
115 1r5m_A SIR4-interacting protei 74.7 2.1 7.2E-05 31.1 2.9 29 60-88 396-424 (425)
116 3b7f_A Glycosyl hydrolase, BNR 74.6 3.2 0.00011 31.9 4.1 36 60-96 56-97 (394)
117 3vl1_A 26S proteasome regulato 74.5 2.2 7.5E-05 31.6 3.0 30 59-88 57-86 (420)
118 1jof_A Carboxy-CIS,CIS-muconat 74.3 2.8 9.6E-05 31.4 3.6 29 58-86 192-221 (365)
119 3mmy_A MRNA export factor; mRN 74.1 3.8 0.00013 29.1 4.1 32 60-91 88-119 (368)
120 1gxr_A ESG1, transducin-like e 74.0 2.4 8.3E-05 29.8 3.0 28 59-86 307-334 (337)
121 3u4y_A Uncharacterized protein 73.9 4.3 0.00015 29.0 4.4 34 59-92 221-255 (331)
122 3bg1_A Protein SEC13 homolog; 73.6 1.8 6.3E-05 31.8 2.4 28 62-89 17-44 (316)
123 1jof_A Carboxy-CIS,CIS-muconat 73.3 4.7 0.00016 30.2 4.6 32 56-88 37-68 (365)
124 4gqb_B Methylosome protein 50; 73.3 2.8 9.7E-05 31.8 3.4 28 62-89 131-158 (344)
125 1r5m_A SIR4-interacting protei 73.1 3.8 0.00013 29.8 3.9 30 60-89 110-139 (425)
126 3i2n_A WD repeat-containing pr 73.0 3 0.0001 29.7 3.3 29 60-88 323-352 (357)
127 2oiz_A Aromatic amine dehydrog 72.9 4.4 0.00015 31.0 4.5 31 59-89 108-140 (361)
128 3bws_A Protein LP49; two-domai 72.9 2.2 7.7E-05 31.8 2.7 30 59-88 401-431 (433)
129 3odt_A Protein DOA1; ubiquitin 72.8 2.3 8E-05 29.7 2.7 32 60-92 268-299 (313)
130 2ymu_A WD-40 repeat protein; u 72.7 3.8 0.00013 31.8 4.1 36 60-95 510-545 (577)
131 1erj_A Transcriptional repress 72.5 2.7 9.1E-05 31.9 3.1 28 61-88 259-286 (393)
132 4h5i_A Guanine nucleotide-exch 72.4 2.7 9.3E-05 31.8 3.2 28 61-88 315-342 (365)
133 2qe8_A Uncharacterized protein 72.3 2.5 8.6E-05 31.8 2.9 28 59-86 195-223 (343)
134 3sov_A LRP-6, low-density lipo 72.3 5 0.00017 30.8 4.7 44 53-96 116-161 (318)
135 3frx_A Guanine nucleotide-bind 72.2 3.5 0.00012 30.3 3.6 30 60-89 198-227 (319)
136 2hes_X YDR267CP; beta-propelle 72.1 2.7 9.3E-05 31.0 3.0 27 62-88 111-137 (330)
137 4a11_B DNA excision repair pro 72.0 3.8 0.00013 29.7 3.7 31 59-89 44-75 (408)
138 1nir_A Nitrite reductase; hemo 71.8 3.1 0.00011 34.1 3.6 28 60-87 180-207 (543)
139 3fm0_A Protein CIAO1; WDR39,SG 71.8 6.3 0.00022 29.2 5.0 32 61-92 64-95 (345)
140 3ow8_A WD repeat-containing pr 71.7 4 0.00014 30.2 3.9 30 60-89 208-237 (321)
141 1got_B GT-beta; complex (GTP-b 71.4 2.8 9.5E-05 31.0 2.9 25 62-86 316-340 (340)
142 3odt_A Protein DOA1; ubiquitin 71.4 5.6 0.00019 27.7 4.4 30 60-90 227-256 (313)
143 1qks_A Cytochrome CD1 nitrite 71.3 2.5 8.5E-05 35.6 2.9 30 59-88 197-226 (567)
144 1yfq_A Cell cycle arrest prote 71.3 3.2 0.00011 29.6 3.1 34 59-92 57-92 (342)
145 3tc9_A Hypothetical hydrolase; 71.2 6.3 0.00022 31.4 5.2 35 57-92 224-260 (430)
146 3ei3_B DNA damage-binding prot 71.2 7.2 0.00025 28.6 5.1 35 59-93 74-109 (383)
147 3dm0_A Maltose-binding peripla 71.1 2.8 9.5E-05 34.4 3.1 25 63-87 667-691 (694)
148 3vl1_A 26S proteasome regulato 70.8 4.2 0.00014 30.1 3.8 30 60-89 141-170 (420)
149 3tc9_A Hypothetical hydrolase; 70.6 3.5 0.00012 32.9 3.6 40 56-96 134-175 (430)
150 3k26_A Polycomb protein EED; W 70.6 3.7 0.00013 29.2 3.3 31 59-89 162-192 (366)
151 3lrv_A PRE-mRNA-splicing facto 70.6 3.7 0.00013 30.2 3.5 31 60-90 172-202 (343)
152 2hes_X YDR267CP; beta-propelle 70.3 4.9 0.00017 29.6 4.1 30 60-89 155-184 (330)
153 3vu4_A KMHSV2; beta-propeller 70.1 3.9 0.00013 30.6 3.6 30 60-89 197-227 (355)
154 4e54_B DNA damage-binding prot 70.0 2.5 8.4E-05 32.5 2.4 28 62-89 300-327 (435)
155 1erj_A Transcriptional repress 70.0 3.7 0.00013 31.1 3.4 27 63-89 128-154 (393)
156 4e54_B DNA damage-binding prot 69.6 7.4 0.00025 29.8 5.1 35 62-96 168-203 (435)
157 3m0c_C LDL receptor, low-densi 69.6 9.9 0.00034 33.6 6.5 42 55-96 467-509 (791)
158 1k8k_C P40, ARP2/3 complex 41 69.5 5.4 0.00018 28.6 4.0 32 60-91 54-85 (372)
159 1l0q_A Surface layer protein; 69.3 3.6 0.00012 30.2 3.1 31 59-89 116-147 (391)
160 2w18_A PALB2, fancn, partner a 69.2 2.8 9.7E-05 34.3 2.8 27 60-86 327-354 (356)
161 4ery_A WD repeat-containing pr 69.2 5 0.00017 28.7 3.8 32 59-90 66-97 (312)
162 2pbi_B Guanine nucleotide-bind 69.1 3.5 0.00012 30.9 3.1 26 61-86 329-354 (354)
163 4aez_A CDC20, WD repeat-contai 69.1 3.9 0.00013 30.8 3.3 31 59-89 350-380 (401)
164 3ow8_A WD repeat-containing pr 69.0 4.1 0.00014 30.2 3.4 29 61-89 251-279 (321)
165 1vyh_C Platelet-activating fac 68.8 4.5 0.00015 31.0 3.7 29 61-89 341-369 (410)
166 2p9w_A MAL S 1 allergenic prot 68.6 6.1 0.00021 32.1 4.6 37 59-95 13-50 (334)
167 3sov_A LRP-6, low-density lipo 68.6 9.3 0.00032 29.2 5.5 44 53-96 160-204 (318)
168 3hxj_A Pyrrolo-quinoline quino 68.3 5.5 0.00019 28.4 3.9 28 61-89 257-284 (330)
169 3p5b_L Low density lipoprotein 68.2 8 0.00027 30.4 5.1 45 53-97 240-285 (400)
170 3p5b_L Low density lipoprotein 67.9 9.7 0.00033 30.0 5.5 41 56-96 199-241 (400)
171 3b7f_A Glycosyl hydrolase, BNR 67.8 5.2 0.00018 30.7 3.9 33 63-96 119-154 (394)
172 3vu4_A KMHSV2; beta-propeller 67.6 5.1 0.00017 30.0 3.7 29 61-89 243-271 (355)
173 1sq9_A Antiviral protein SKI8; 67.6 5.1 0.00017 29.3 3.6 30 60-89 293-322 (397)
174 4gqb_B Methylosome protein 50; 67.5 4.7 0.00016 30.6 3.6 28 62-89 303-331 (344)
175 3dwl_C Actin-related protein 2 67.2 3 0.0001 30.5 2.3 30 60-89 207-236 (377)
176 2aq5_A Coronin-1A; WD40 repeat 66.6 5.7 0.00019 29.7 3.8 30 60-89 178-207 (402)
177 2hqs_A Protein TOLB; TOLB, PAL 65.7 13 0.00043 28.8 5.7 35 60-94 355-392 (415)
178 3c75_H MADH, methylamine dehyd 65.6 16 0.00053 29.9 6.5 74 14-91 62-160 (426)
179 3s94_A LRP-6, low-density lipo 65.5 15 0.0005 31.1 6.5 45 52-96 120-166 (619)
180 1nr0_A Actin interacting prote 65.0 6.9 0.00024 31.7 4.3 29 61-89 327-355 (611)
181 1n7d_A LDL receptor, low-densi 65.0 8.4 0.00029 33.0 5.0 40 57-96 451-491 (699)
182 4g56_B MGC81050 protein; prote 65.0 5.5 0.00019 30.0 3.4 28 62-89 143-170 (357)
183 1vyh_C Platelet-activating fac 65.0 6 0.00021 30.3 3.7 28 62-89 112-139 (410)
184 2oit_A Nucleoporin 214KDA; NH2 64.9 6.4 0.00022 31.1 4.0 30 59-88 193-222 (434)
185 1nr0_A Actin interacting prote 64.7 5.4 0.00019 32.3 3.6 29 61-89 539-567 (611)
186 3gre_A Serine/threonine-protei 64.6 4.7 0.00016 30.2 3.0 30 60-89 216-245 (437)
187 1l0q_A Surface layer protein; 64.5 7.4 0.00025 28.5 4.0 31 59-89 32-63 (391)
188 3dwl_C Actin-related protein 2 64.3 5.1 0.00017 29.2 3.0 29 59-87 147-175 (377)
189 3ei3_B DNA damage-binding prot 63.9 7.6 0.00026 28.5 4.0 30 61-90 166-195 (383)
190 4a9v_A PHOX; hydrolase, beta-p 63.5 5.6 0.00019 34.9 3.7 42 56-98 381-452 (592)
191 2aq5_A Coronin-1A; WD40 repeat 62.8 7.5 0.00026 29.0 3.8 31 60-90 83-114 (402)
192 2mad_H Methylamine dehydrogena 62.7 9.8 0.00034 29.6 4.6 36 52-89 313-350 (373)
193 1sq9_A Antiviral protein SKI8; 62.5 5.6 0.00019 29.0 3.0 30 59-88 355-394 (397)
194 2pm9_A Protein WEB1, protein t 62.5 6.4 0.00022 28.8 3.3 30 60-89 69-98 (416)
195 3gre_A Serine/threonine-protei 62.2 5.4 0.00019 29.9 2.9 29 60-88 65-94 (437)
196 1pgu_A Actin interacting prote 61.3 6.9 0.00024 30.3 3.4 31 59-89 489-519 (615)
197 2ojh_A Uncharacterized protein 60.4 12 0.00042 25.3 4.3 33 60-93 43-76 (297)
198 2vdu_B TRNA (guanine-N(7)-)-me 60.2 7.2 0.00025 29.9 3.4 30 59-88 150-179 (450)
199 2pm9_A Protein WEB1, protein t 60.1 9.4 0.00032 27.9 3.9 31 59-89 263-294 (416)
200 4a0p_A LRP6, LRP-6, low-densit 60.0 19 0.00064 30.6 6.2 44 51-94 72-116 (628)
201 3v7d_B Cell division control p 59.7 7.4 0.00025 29.4 3.3 31 59-89 311-341 (464)
202 3s94_A LRP-6, low-density lipo 59.7 12 0.00041 31.7 4.9 46 53-98 343-389 (619)
203 4aez_A CDC20, WD repeat-contai 59.4 11 0.00038 28.2 4.3 30 61-90 137-166 (401)
204 3o4h_A Acylamino-acid-releasin 59.4 10 0.00034 30.2 4.2 32 62-93 198-231 (582)
205 2oaj_A Protein SNI1; WD40 repe 58.6 6.5 0.00022 34.4 3.2 31 59-89 18-48 (902)
206 3m0c_C LDL receptor, low-densi 57.6 19 0.00064 31.8 6.0 42 56-97 511-554 (791)
207 3jro_A Fusion protein of prote 57.5 9.8 0.00034 32.0 4.0 33 61-93 12-44 (753)
208 3i2n_A WD repeat-containing pr 56.5 9.5 0.00033 27.0 3.3 29 59-87 210-241 (357)
209 2mad_H Methylamine dehydrogena 56.4 17 0.00057 28.3 5.0 31 59-90 125-157 (373)
210 1pgu_A Actin interacting prote 56.2 14 0.00048 28.5 4.4 29 61-89 209-238 (615)
211 3o4h_A Acylamino-acid-releasin 54.9 9.9 0.00034 30.2 3.4 34 62-95 153-190 (582)
212 1n7d_A LDL receptor, low-densi 54.6 22 0.00076 30.4 5.8 42 56-97 537-579 (699)
213 2oaj_A Protein SNI1; WD40 repe 53.5 11 0.00038 32.9 3.8 31 61-91 101-131 (902)
214 4a9v_A PHOX; hydrolase, beta-p 53.4 17 0.0006 31.8 5.0 39 58-97 475-526 (592)
215 2ojh_A Uncharacterized protein 53.2 24 0.00082 23.8 4.8 34 61-94 219-263 (297)
216 2j04_B YDR362CP, TAU91; beta p 52.5 8.5 0.00029 31.7 2.8 30 60-89 399-428 (524)
217 2iwa_A Glutamine cyclotransfer 51.8 22 0.00075 27.3 4.9 41 50-91 12-55 (266)
218 3lrv_A PRE-mRNA-splicing facto 51.6 12 0.00043 27.3 3.3 31 61-91 128-160 (343)
219 1nir_A Nitrite reductase; hemo 51.4 11 0.00037 30.9 3.2 31 59-89 222-257 (543)
220 4a2l_A BT_4663, two-component 51.0 18 0.0006 30.5 4.5 34 63-97 361-394 (795)
221 2ecf_A Dipeptidyl peptidase IV 51.0 21 0.00071 29.0 4.8 34 60-93 38-77 (741)
222 3no2_A Uncharacterized protein 50.9 39 0.0013 24.8 6.0 38 59-100 37-74 (276)
223 2vdu_B TRNA (guanine-N(7)-)-me 50.8 20 0.00067 27.4 4.4 32 59-91 242-273 (450)
224 2ece_A 462AA long hypothetical 50.6 17 0.00059 30.8 4.4 18 60-77 382-399 (462)
225 3dm0_A Maltose-binding peripla 50.5 13 0.00045 30.3 3.6 29 61-89 433-461 (694)
226 3sre_A PON1, serum paraoxonase 50.3 14 0.00048 29.6 3.7 31 57-88 163-211 (355)
227 3sjl_D Methylamine dehydrogena 50.3 58 0.002 26.4 7.4 31 59-90 79-119 (386)
228 3v9f_A Two-component system se 50.1 16 0.00054 30.7 4.1 34 62-96 498-531 (781)
229 3pe7_A Oligogalacturonate lyas 50.1 67 0.0023 23.2 7.1 29 63-91 85-113 (388)
230 3azo_A Aminopeptidase; POP fam 49.2 15 0.00051 29.4 3.7 36 59-94 242-279 (662)
231 3no2_A Uncharacterized protein 48.6 16 0.00056 26.9 3.6 38 60-99 126-163 (276)
232 3mkq_A Coatomer beta'-subunit; 48.3 17 0.00058 29.5 3.9 30 60-89 15-44 (814)
233 1mda_H Methylamine dehydrogena 47.5 17 0.00058 28.9 3.7 36 60-97 315-352 (368)
234 3sbq_A Nitrous-oxide reductase 47.4 14 0.00049 32.9 3.5 31 57-88 376-407 (638)
235 3amr_A 3-phytase; beta-propell 46.2 19 0.00065 29.4 3.9 34 53-88 176-209 (355)
236 3mkq_A Coatomer beta'-subunit; 44.0 17 0.00058 29.5 3.2 31 61-91 58-88 (814)
237 3sjl_D Methylamine dehydrogena 43.9 30 0.001 28.0 4.7 32 59-90 137-170 (386)
238 3c75_H MADH, methylamine dehyd 43.3 18 0.0006 29.6 3.3 37 51-89 364-402 (426)
239 3sfz_A APAF-1, apoptotic pepti 43.1 24 0.00081 30.6 4.2 30 60-89 659-688 (1249)
240 3zwu_A Alkaline phosphatase PH 42.9 19 0.00067 31.1 3.6 41 57-98 382-452 (592)
241 3jro_A Fusion protein of prote 42.2 25 0.00085 29.5 4.1 33 62-94 57-91 (753)
242 2cn3_A Xyloglucanase, beta-1,4 41.2 23 0.00079 30.2 3.8 33 62-95 26-60 (737)
243 3sfz_A APAF-1, apoptotic pepti 41.1 22 0.00074 30.9 3.6 29 61-89 618-646 (1249)
244 3v7d_B Cell division control p 40.3 21 0.00073 26.8 3.1 30 59-89 163-192 (464)
245 3sui_B Transient receptor pote 39.4 12 0.0004 21.6 1.2 33 60-102 1-33 (37)
246 2xbg_A YCF48-like protein; pho 39.3 57 0.002 24.4 5.4 47 49-96 26-72 (327)
247 2xyi_A Probable histone-bindin 37.4 24 0.0008 26.9 3.0 31 59-89 278-309 (430)
248 1fwx_A Nitrous oxide reductase 37.2 29 0.00098 30.3 3.8 32 57-89 329-361 (595)
249 4fww_A Macrophage-stimulating 36.9 20 0.00069 29.7 2.7 26 62-87 408-435 (527)
250 4a2l_A BT_4663, two-component 36.2 24 0.00081 29.7 3.0 34 63-97 314-347 (795)
251 3kya_A Putative phosphatase; s 35.7 41 0.0014 28.3 4.5 44 55-98 306-355 (496)
252 2xyi_A Probable histone-bindin 35.7 28 0.00095 26.5 3.2 30 60-89 183-213 (430)
253 2xbg_A YCF48-like protein; pho 35.4 39 0.0013 25.3 3.9 35 61-96 252-286 (327)
254 1sqj_A OXG-RCBH, oligoxylogluc 35.3 34 0.0012 29.6 4.0 34 62-95 18-52 (789)
255 2hqs_A Protein TOLB; TOLB, PAL 34.8 61 0.0021 24.9 5.0 35 60-94 180-217 (415)
256 3v9f_A Two-component system se 34.6 44 0.0015 27.9 4.4 34 63-97 317-350 (781)
257 3a0f_A Xyloglucanase; beta-pro 34.4 37 0.0013 29.2 4.0 36 62-97 24-60 (763)
258 4gq1_A NUP37; propeller, trans 34.4 22 0.00075 26.9 2.4 23 62-85 363-385 (393)
259 3ott_A Two-component system se 33.7 62 0.0021 26.9 5.2 33 63-97 377-409 (758)
260 3c5m_A Oligogalacturonate lyas 33.3 1.3E+02 0.0045 21.5 6.7 28 64-91 86-113 (396)
261 2oit_A Nucleoporin 214KDA; NH2 32.8 18 0.00063 28.4 1.7 28 60-87 94-125 (434)
262 3qqz_A Putative uncharacterize 32.7 36 0.0012 25.9 3.3 37 59-95 27-64 (255)
263 1xfd_A DIP, dipeptidyl aminope 31.9 21 0.00073 28.7 2.0 29 60-89 18-46 (723)
264 1k32_A Tricorn protease; prote 30.3 74 0.0025 27.6 5.2 32 60-91 380-411 (1045)
265 3ott_A Two-component system se 29.6 29 0.00099 28.9 2.5 33 61-95 519-551 (758)
266 2j04_B YDR362CP, TAU91; beta p 28.6 34 0.0012 28.0 2.7 28 61-89 269-296 (524)
267 2ecf_A Dipeptidyl peptidase IV 28.4 83 0.0029 25.4 5.0 20 61-80 211-230 (741)
268 3c5m_A Oligogalacturonate lyas 27.7 1.1E+02 0.0037 21.9 5.0 31 61-91 240-275 (396)
269 2ovr_B FBW7, F-BOX/WD repeat p 26.9 36 0.0012 25.6 2.4 25 65-89 124-148 (445)
270 3azo_A Aminopeptidase; POP fam 26.8 49 0.0017 26.4 3.3 29 61-89 132-170 (662)
271 2iwa_A Glutamine cyclotransfer 26.5 85 0.0029 24.0 4.5 30 61-90 107-136 (266)
272 2x8n_A CV0863; non-uniform sam 26.4 36 0.0012 23.4 2.1 40 60-101 26-65 (111)
273 1z68_A Fibroblast activation p 26.3 68 0.0023 25.9 4.1 31 60-90 61-100 (719)
274 1qks_A Cytochrome CD1 nitrite 26.1 1.1E+02 0.0038 25.5 5.5 31 59-89 240-275 (567)
275 1olz_A Semaphorin 4D; developm 26.0 40 0.0014 29.4 2.8 26 62-87 400-432 (663)
276 2ovr_B FBW7, F-BOX/WD repeat p 25.7 31 0.0011 26.0 1.9 27 61-87 410-440 (445)
277 1p22_A F-BOX/WD-repeat protein 25.1 63 0.0022 24.3 3.5 25 65-89 138-162 (435)
278 1xfd_A DIP, dipeptidyl aminope 25.1 91 0.0031 25.0 4.6 32 60-91 62-102 (723)
279 3kya_A Putative phosphatase; s 25.0 40 0.0014 28.4 2.6 45 55-99 135-181 (496)
280 1p22_A F-BOX/WD-repeat protein 24.4 77 0.0026 23.8 3.9 27 62-90 177-203 (435)
281 2z3z_A Dipeptidyl aminopeptida 23.9 92 0.0031 25.0 4.4 31 60-90 259-294 (706)
282 2hz6_A Endoplasmic reticulum t 22.7 89 0.003 23.7 4.0 25 63-89 4-28 (369)
283 2z3z_A Dipeptidyl aminopeptida 22.4 1.5E+02 0.0051 23.8 5.4 30 59-89 121-150 (706)
284 4gq1_A NUP37; propeller, trans 21.7 31 0.001 26.1 1.1 28 62-89 140-175 (393)
285 1zso_A Hypothetical protein; s 21.1 95 0.0032 22.7 3.7 38 59-96 110-147 (164)
286 2ece_A 462AA long hypothetical 20.9 54 0.0019 27.7 2.6 45 52-96 243-296 (462)
287 3lay_A Zinc resistance-associa 20.1 22 0.00075 26.4 0.0 12 1-12 25-36 (175)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.80 E-value=4.4e-05 Score=57.41 Aligned_cols=54 Identities=30% Similarity=0.597 Sum_probs=43.3
Q ss_pred cCceeecc-CCCCCCCceeecCCCCcceEEeecceEEEEeCCCCCeEEEEEcCCC
Q 044375 48 EGSRIIQV-TGALGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAVTTSQ 101 (116)
Q Consensus 48 ~~ae~l~~-~~~~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA~Ts~~ 101 (116)
...+.+.+ ++..+||++++|++|+.+|++..+|+|+||+.++..++.|+..+.+
T Consensus 7 ~~~~~i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~ 61 (322)
T 2fp8_A 7 PILKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPY 61 (322)
T ss_dssp ---CEEEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTT
T ss_pred CccceeecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEeccccc
Confidence 34556766 5678999999999997799999999999999887778989876554
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.54 E-value=0.00012 Score=59.45 Aligned_cols=52 Identities=21% Similarity=0.347 Sum_probs=37.9
Q ss_pred cccCceeeccCCCCCCCceeecCCCCcceEEe-------------ecceEEEEeCCC--CCeEEEEEcC
Q 044375 46 NLEGSRIIQVTGALGPESIAFDPNGDGPYTGV-------------ANGRILKWQGDE--LGWTEFAVTT 99 (116)
Q Consensus 46 ~L~~ae~l~~~~~~GPEsiAfD~~G~g~YTG~-------------~DGrIlR~~~~~--~~w~~fA~Ts 99 (116)
.++.-+.|. +...|||||+++++|. .|+++ .+|+|+++++++ ...+.++.+.
T Consensus 38 ~~~~C~~i~-~~~~G~EDi~~~~~G~-~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g 104 (355)
T 3sre_A 38 ELPNCNLVK-GIDNGSEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIG 104 (355)
T ss_dssp CCSCEEECT-TCCSCCCEEEECTTSE-EEEEECCC-----------CCEEEEEETTSSSCCEEECEEEC
T ss_pred CCCCCEEeC-CCCCCcceeEEcCCCe-EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccC
Confidence 344555553 3257999999999997 99998 799999999863 3466666664
No 3
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.86 E-value=0.016 Score=41.77 Aligned_cols=42 Identities=29% Similarity=0.272 Sum_probs=33.7
Q ss_pred cCCCCCCCceeecCCCCcceEE--------eecceEEEEeCCCCCeEEEEE
Q 044375 55 VTGALGPESIAFDPNGDGPYTG--------VANGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 55 ~~~~~GPEsiAfD~~G~g~YTG--------~~DGrIlR~~~~~~~w~~fA~ 97 (116)
..+..+||++++|++|+ +|.+ ..+|+|.+|+.....+..|..
T Consensus 14 ~~~~~~~~~~~~~~~g~-l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 63 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGD-FYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK 63 (314)
T ss_dssp ECCCTTCEEEEECTTSC-EEEEETTCEETTEECCEEEEECTTTCCEEEEEC
T ss_pred hccCCCccCceECCCCC-EEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe
Confidence 34578999999999997 8866 889999999976666766643
No 4
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.77 E-value=0.052 Score=42.68 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=28.1
Q ss_pred CCCCCCceeecCCCCcceEEeec--------------ceEEEEeCCCC
Q 044375 57 GALGPESIAFDPNGDGPYTGVAN--------------GRILKWQGDEL 90 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~YTG~~D--------------GrIlR~~~~~~ 90 (116)
..+.|.+|+|++||. +|.+..| |+|+|+++++.
T Consensus 133 ~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~ 179 (354)
T 3a9g_A 133 YIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGR 179 (354)
T ss_dssp SSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSC
T ss_pred CCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCC
Confidence 456789999999997 9998765 89999998765
No 5
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.65 E-value=0.07 Score=38.69 Aligned_cols=36 Identities=8% Similarity=0.053 Sum_probs=29.4
Q ss_pred CCCCCceeecCCCCcceEEeecceEEEEeCCCCCeEEE
Q 044375 58 ALGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEF 95 (116)
Q Consensus 58 ~~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~f 95 (116)
...|..+++|++|+ +|.+. +++|.+|++++.....+
T Consensus 217 ~~~p~~i~~d~~G~-l~v~~-~~~v~~~~~~g~~~~~~ 252 (296)
T 3e5z_A 217 PGKTDGLRVDAGGL-IWASA-GDGVHVLTPDGDELGRV 252 (296)
T ss_dssp SSCCCSEEEBTTSC-EEEEE-TTEEEEECTTSCEEEEE
T ss_pred CCCCCeEEECCCCC-EEEEc-CCeEEEECCCCCEEEEE
Confidence 35789999999997 99999 99999999876544444
No 6
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=94.55 E-value=0.063 Score=37.82 Aligned_cols=37 Identities=24% Similarity=0.362 Sum_probs=30.3
Q ss_pred CCCCCCCceeecCCCCcceEEeecceEEEEeCCCCCeE
Q 044375 56 TGALGPESIAFDPNGDGPYTGVANGRILKWQGDELGWT 93 (116)
Q Consensus 56 ~~~~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~ 93 (116)
.....|.++++|++|+ +|.+..+|+|.+|+.++....
T Consensus 64 ~~~~~p~~i~~~~~g~-l~v~~~~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 64 NGLYQPQGLAVDGAGT-VYVTDFNNRVVTLAAGSNNQT 100 (270)
T ss_dssp CSCCSCCCEEECTTCC-EEEEETTTEEEEECTTCSCCE
T ss_pred CCcCCcceeEECCCCC-EEEEcCCCEEEEEeCCCceEe
Confidence 3446899999999998 999888999999998765443
No 7
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.51 E-value=0.044 Score=42.78 Aligned_cols=32 Identities=31% Similarity=0.559 Sum_probs=27.1
Q ss_pred CCCCCCceeecCCCCcceEEeec--------------ceEEEEeCCC
Q 044375 57 GALGPESIAFDPNGDGPYTGVAN--------------GRILKWQGDE 89 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~YTG~~D--------------GrIlR~~~~~ 89 (116)
..+.|..++|++||. +|.+..| |+|+|+++++
T Consensus 133 ~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 133 GLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp CCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred CCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 346789999999996 9998754 8999999876
No 8
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.30 E-value=0.067 Score=38.79 Aligned_cols=45 Identities=18% Similarity=0.223 Sum_probs=35.1
Q ss_pred eeeccCCCCCCCceeecCCCC-cceEEeecceEEEEeCCCCCeEEEEE
Q 044375 51 RIIQVTGALGPESIAFDPNGD-GPYTGVANGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 51 e~l~~~~~~GPEsiAfD~~G~-g~YTG~~DGrIlR~~~~~~~w~~fA~ 97 (116)
+.+.. +..-||++++|++|+ -.+++..+|+|.+|++++. +..|..
T Consensus 21 ~~l~~-~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~ 66 (296)
T 3e5z_A 21 RRLAD-GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMH 66 (296)
T ss_dssp EEEEC-CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEES
T ss_pred EEEec-CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEEC
Confidence 44443 356899999999996 5778899999999998875 666653
No 9
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.23 E-value=0.075 Score=38.86 Aligned_cols=39 Identities=23% Similarity=0.300 Sum_probs=31.9
Q ss_pred CCCCCCceeecCCCCcce-EEeecceEEEEeCCCCCeEEEE
Q 044375 57 GALGPESIAFDPNGDGPY-TGVANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~Y-TG~~DGrIlR~~~~~~~w~~fA 96 (116)
...+||++++|++|+ +| ++..+|+|.+|+.++..+..+.
T Consensus 43 ~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp SCCCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEE
T ss_pred cCccccCcEECCCCC-EEEEECCCCEEEEEeCCCCcEEEEe
Confidence 456899999999998 77 6788999999998766666554
No 10
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.12 E-value=0.038 Score=43.49 Aligned_cols=44 Identities=18% Similarity=-0.008 Sum_probs=34.0
Q ss_pred ceeeccCCCCCCCceeecCCCCcceEEeecceEEEEeCCCCCeEEEEE
Q 044375 50 SRIIQVTGALGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 50 ae~l~~~~~~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA~ 97 (116)
+|++.. ++..|++|+|+++|+ +|.+-.+|+|++++.++. +.++.
T Consensus 21 ~~~va~-~l~~P~~ia~~pdG~-l~V~e~~g~I~~~d~~G~--~~~~~ 64 (354)
T 3a9g_A 21 ISEVAS-DLEVPWSIAPLGGGR-YLVTERPGRLVLISPSGK--KLVAS 64 (354)
T ss_dssp EEEEEC-SCSCEEEEEEEETTE-EEEEETTTEEEEECSSCE--EEEEE
T ss_pred EEEEeC-CCCCCeEEEEcCCCe-EEEEeCCCEEEEEeCCCc--eEeec
Confidence 444443 478999999999997 999999999999975543 55543
No 11
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.59 E-value=0.081 Score=41.39 Aligned_cols=31 Identities=13% Similarity=0.293 Sum_probs=26.7
Q ss_pred CCCCceeecCCCCcceEEeec--------------ceEEEEeCCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVAN--------------GRILKWQGDEL 90 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~D--------------GrIlR~~~~~~ 90 (116)
+.|..|+|++||. +|.++.| |+|+|+++++.
T Consensus 130 h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 130 HFGGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CCCCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred ccCccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 4578999999996 9999876 79999998765
No 12
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.55 E-value=0.11 Score=40.55 Aligned_cols=43 Identities=23% Similarity=0.333 Sum_probs=32.9
Q ss_pred ceeeccCCCCCCCceeecCCCCcceEEeecceEEEEeCCCCCeEEEE
Q 044375 50 SRIIQVTGALGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 50 ae~l~~~~~~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA 96 (116)
++.+.. ++.+|++++|+++|+ +|.+-.+|+|++++ ++ ..+.++
T Consensus 23 ~~~va~-~l~~P~~ia~~pdG~-l~V~e~~g~I~~i~-~g-~~~~~~ 65 (352)
T 2ism_A 23 VEEVVG-GLEVPWALAFLPDGG-MLIAERPGRIRLFR-EG-RLSTYA 65 (352)
T ss_dssp EEEEEC-CCSCEEEEEECTTSC-EEEEETTTEEEEEE-TT-EEEEEE
T ss_pred EEEEEC-CCCCceEEEEcCCCe-EEEEeCCCeEEEEE-CC-CccEee
Confidence 344443 467999999999998 99999999999998 43 344444
No 13
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.55 E-value=0.07 Score=43.76 Aligned_cols=33 Identities=15% Similarity=0.334 Sum_probs=28.3
Q ss_pred CCCCCCceeecCCCCcceEEeec---------------------------------ceEEEEeCCCC
Q 044375 57 GALGPESIAFDPNGDGPYTGVAN---------------------------------GRILKWQGDEL 90 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~YTG~~D---------------------------------GrIlR~~~~~~ 90 (116)
..+.+-.|+||+||. +|.++.| |+|+|+++++.
T Consensus 142 ~~H~~~~l~f~pDG~-Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ 207 (454)
T 1cru_A 142 KDHQSGRLVIGPDQK-IYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGS 207 (454)
T ss_dssp SSCCEEEEEECTTSC-EEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSC
T ss_pred CCCCCCeEeECCCCe-EEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCC
Confidence 457799999999997 9998765 79999998875
No 14
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=93.41 E-value=0.098 Score=36.81 Aligned_cols=31 Identities=29% Similarity=0.558 Sum_probs=24.6
Q ss_pred CCCceeecCCCCcceE-E-eecceEEEEeCCCCC
Q 044375 60 GPESIAFDPNGDGPYT-G-VANGRILKWQGDELG 91 (116)
Q Consensus 60 GPEsiAfD~~G~g~YT-G-~~DGrIlR~~~~~~~ 91 (116)
.|+++++|++|+ +|. + ..+|+|.+|+..+..
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~~ 57 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMYGRVVKLATGSTG 57 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSSCEEEEECC----
T ss_pred CccceEECCCCC-EEEEccCCCCcEEEecCCCcc
Confidence 999999999997 998 7 678999999875533
No 15
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.34 E-value=0.095 Score=41.41 Aligned_cols=38 Identities=24% Similarity=0.286 Sum_probs=30.9
Q ss_pred ceeeccCCCCCCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 50 SRIIQVTGALGPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 50 ae~l~~~~~~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
+..|.-.+..|=..+.||++|. +|++ .||+|+|+++..
T Consensus 79 ~t~IG~~Gw~~F~a~~fD~~G~-LYav-~dG~iyr~~pP~ 116 (236)
T 1tl2_A 79 AKKIGNGGWNQFQFLFFDPNGY-LYAV-SKDKLYKASPPQ 116 (236)
T ss_dssp CEEEECSCGGGCSEEEECTTSC-EEEE-ETTEEEEESCCC
T ss_pred ccEecccccccceEEEECCCCC-EEEe-CCCEEEEeCCCc
Confidence 4556665666668999999996 9999 999999998843
No 16
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.08 E-value=0.14 Score=41.28 Aligned_cols=51 Identities=24% Similarity=0.338 Sum_probs=36.8
Q ss_pred cccCceeecc----CCCCCCCceeecCCCCcceEEeec--------------ceEEEEeCCCC--------CeEEEEE
Q 044375 46 NLEGSRIIQV----TGALGPESIAFDPNGDGPYTGVAN--------------GRILKWQGDEL--------GWTEFAV 97 (116)
Q Consensus 46 ~L~~ae~l~~----~~~~GPEsiAfD~~G~g~YTG~~D--------------GrIlR~~~~~~--------~w~~fA~ 97 (116)
++.+.+.|.. +..+.+-+|+|++||. +|.++.| |+|+|++++++ ..+.||+
T Consensus 123 ~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~ 199 (347)
T 3das_A 123 QLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSY 199 (347)
T ss_dssp CBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEB
T ss_pred cCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEee
Confidence 4545554432 3456778899999996 9999864 99999998876 4555654
No 17
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.71 E-value=0.19 Score=35.35 Aligned_cols=39 Identities=21% Similarity=0.196 Sum_probs=32.0
Q ss_pred CCCCCCceeecCCCCcceEEee-cceEEEEeCCCCCeEEEEE
Q 044375 57 GALGPESIAFDPNGDGPYTGVA-NGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~YTG~~-DGrIlR~~~~~~~w~~fA~ 97 (116)
....|.++++|++|. +|.+.. +|+|.+|+.+ ..+..+..
T Consensus 13 ~~~~~~~i~~d~~g~-l~v~~~~~~~v~~~d~~-~~~~~~~~ 52 (299)
T 2z2n_A 13 QDTGPYGITVSDKGK-VWITQHKANMISCINLD-GKITEYPL 52 (299)
T ss_dssp SSCCEEEEEECTTSC-EEEEETTTTEEEEECTT-CCEEEEEC
T ss_pred cCCCccceEECCCCC-EEEEecCCCcEEEEcCC-CCeEEecC
Confidence 446899999999997 888877 7999999987 56776654
No 18
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.21 E-value=0.42 Score=35.54 Aligned_cols=36 Identities=22% Similarity=0.205 Sum_probs=29.2
Q ss_pred CCCCceeecCCCCcceEEe-ecceEEEEeCCCCCeEEEE
Q 044375 59 LGPESIAFDPNGDGPYTGV-ANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~~~~w~~fA 96 (116)
..||++++|++|+ +|... .+|+|+||++++ ....+.
T Consensus 32 ~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g-~~~~~~ 68 (306)
T 2p4o_A 32 TFLENLASAPDGT-IFVTNHEVGEIVSITPDG-NQQIHA 68 (306)
T ss_dssp CCEEEEEECTTSC-EEEEETTTTEEEEECTTC-CEEEEE
T ss_pred CCcceEEECCCCC-EEEEeCCCCeEEEECCCC-ceEEEE
Confidence 5899999999997 88775 789999999876 455443
No 19
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=91.91 E-value=0.16 Score=36.36 Aligned_cols=39 Identities=18% Similarity=0.180 Sum_probs=29.9
Q ss_pred CCCCCCCceeecCCCCcceEE-eecceEEEEeCCCCCeEEE
Q 044375 56 TGALGPESIAFDPNGDGPYTG-VANGRILKWQGDELGWTEF 95 (116)
Q Consensus 56 ~~~~GPEsiAfD~~G~g~YTG-~~DGrIlR~~~~~~~w~~f 95 (116)
+....|.++++|++|+ +|.+ ..+|+|.+|+.++.....|
T Consensus 27 g~~~~p~~v~~~~~g~-l~v~~~~~~~i~~~d~~g~~~~~~ 66 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQND-IIVADTNNHRIQIFDKEGRFKFQF 66 (286)
T ss_dssp TCBSCEEEEEECTTCC-EEEEEGGGTEEEEECTTSCEEEEE
T ss_pred CccCCCceEEECCCCC-EEEEECCCCEEEEECCCCcEEEEe
Confidence 4567899999999998 7766 6789999999775433333
No 20
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=91.70 E-value=0.32 Score=34.23 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=31.0
Q ss_pred CCCCCCceeecCCCCcceEEe-ecceEEEEeCCCCCeEEEE
Q 044375 57 GALGPESIAFDPNGDGPYTGV-ANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~~~~w~~fA 96 (116)
+...|.++++|++|. +|.+. .+|+|.++++. ..+..+.
T Consensus 18 ~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~-~~~~~~~ 56 (300)
T 2qc5_A 18 PDSGPYGITSSEDGK-VWFTQHKANKISSLDQS-GRIKEFE 56 (300)
T ss_dssp TTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEE
T ss_pred CCCCcceeeECCCCC-EEEEcCCCCeEEEECCC-CceEEEE
Confidence 457999999999997 88887 57999999987 4566654
No 21
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=91.67 E-value=0.27 Score=35.47 Aligned_cols=33 Identities=12% Similarity=0.273 Sum_probs=27.5
Q ss_pred CCCCceeecCCCCcceEEee-------cceEEEEeCCCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVA-------NGRILKWQGDELG 91 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~-------DGrIlR~~~~~~~ 91 (116)
.||.+++++++|+.+|++.. ||+|..|+.....
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~ 80 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE 80 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCC
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCe
Confidence 58999999999988999985 5689999876543
No 22
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=91.41 E-value=0.24 Score=40.47 Aligned_cols=42 Identities=21% Similarity=0.243 Sum_probs=33.7
Q ss_pred CCCCceeecCCCCcceE-Eeec-ceEEEEeCCCCCeEEEEEcCCC
Q 044375 59 LGPESIAFDPNGDGPYT-GVAN-GRILKWQGDELGWTEFAVTTSQ 101 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YT-G~~D-GrIlR~~~~~~~w~~fA~Ts~~ 101 (116)
.||.|+++|++|+ .|. +..- +.|+|+++++..-..|....++
T Consensus 137 ~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~ 180 (334)
T 2p9w_A 137 FGVVQSAQDRDGN-SYVAFALGMPAIARVSADGKTVSTFAWESGN 180 (334)
T ss_dssp EEEEEEEECTTSC-EEEEEEESSCEEEEECTTSCCEEEEEECCCC
T ss_pred cCCceeEECCCCC-EEEeCCCCCCeEEEEeCCCCEEeeeeecCCC
Confidence 3699999999997 888 7888 9999999998766666544443
No 23
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=90.52 E-value=0.33 Score=35.73 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=28.1
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCCCCeEEE
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEF 95 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~f 95 (116)
..|..+++|++|+ +|.+..+| |.+|++++.....+
T Consensus 239 ~~pdgi~~d~~G~-lwv~~~~g-v~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 239 GLPDGFCVDRGGW-LWSSSGTG-VCVFDSDGQLLGHI 273 (305)
T ss_dssp SCCCSEEECTTSC-EEECCSSE-EEEECTTSCEEEEE
T ss_pred CCCCeEEECCCCC-EEEecCCc-EEEECCCCCEEEEE
Confidence 4689999999997 99999665 99999876544444
No 24
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.41 E-value=0.41 Score=35.22 Aligned_cols=34 Identities=15% Similarity=0.288 Sum_probs=27.0
Q ss_pred CCCCceeecCCCCcceEEee-cceEEEEeCCCCCeE
Q 044375 59 LGPESIAFDPNGDGPYTGVA-NGRILKWQGDELGWT 93 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~-DGrIlR~~~~~~~w~ 93 (116)
..|..+++|++|+ +|.+.. +|+|.+|+++.....
T Consensus 199 ~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 199 QIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGKRL 233 (297)
T ss_dssp CEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCCEE
T ss_pred CCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCceEE
Confidence 4699999999996 999876 578999998743333
No 25
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.21 E-value=0.54 Score=38.45 Aligned_cols=46 Identities=11% Similarity=0.206 Sum_probs=34.0
Q ss_pred ceeeccCCCCCCCceeecCCCCcceEEeecc-eEEEEeCCCCCeEEEEE
Q 044375 50 SRIIQVTGALGPESIAFDPNGDGPYTGVANG-RILKWQGDELGWTEFAV 97 (116)
Q Consensus 50 ae~l~~~~~~GPEsiAfD~~G~g~YTG~~DG-rIlR~~~~~~~w~~fA~ 97 (116)
++++. .++..|.+|+|+++|+ +|.+..+| ||++++..+...+.++.
T Consensus 19 ~~~~a-~~l~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~~ 65 (454)
T 1cru_A 19 KKVIL-SNLNKPHALLWGPDNQ-IWLTERATGKILRVNPESGSVKTVFQ 65 (454)
T ss_dssp EEEEE-CCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred EEEEE-CCCCCceEEEEcCCCc-EEEEEcCCCEEEEEECCCCcEeEEec
Confidence 34443 3478999999999998 99998886 89999865444555543
No 26
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.02 E-value=0.45 Score=38.35 Aligned_cols=45 Identities=24% Similarity=0.215 Sum_probs=33.7
Q ss_pred CceeeccCCCCCCCceeecCCCCcceEEee-cceEEEEeCCCCCeEEE
Q 044375 49 GSRIIQVTGALGPESIAFDPNGDGPYTGVA-NGRILKWQGDELGWTEF 95 (116)
Q Consensus 49 ~ae~l~~~~~~GPEsiAfD~~G~g~YTG~~-DGrIlR~~~~~~~w~~f 95 (116)
.++++. .++..|.+|+|+++|+ +|.+-. .|+|+++..++...+.+
T Consensus 23 ~~~~va-~gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v 68 (347)
T 3das_A 23 VLRTVA-TGLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTEL 68 (347)
T ss_dssp EEEEEE-CCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEE
T ss_pred eeEEee-cCCCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeee
Confidence 344443 4578999999999997 888888 99999998654344433
No 27
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=89.91 E-value=0.28 Score=36.65 Aligned_cols=34 Identities=18% Similarity=0.263 Sum_probs=27.7
Q ss_pred CCCCCCCceeecCCCCcceEE-eecceEEEEeCCCC
Q 044375 56 TGALGPESIAFDPNGDGPYTG-VANGRILKWQGDEL 90 (116)
Q Consensus 56 ~~~~GPEsiAfD~~G~g~YTG-~~DGrIlR~~~~~~ 90 (116)
+....|.++++|++|+ +|.. ..+++|.+|+.++.
T Consensus 88 ~~~~~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~ 122 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGN-YWVTDVALHQVFKLDPHSK 122 (329)
T ss_dssp TTCSSEEEEEECTTSC-EEEEETTTTEEEEECTTCS
T ss_pred CccCCceEEEECCCCC-EEEEECCCCEEEEEeCCCC
Confidence 4567899999999998 6655 55799999998764
No 28
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=89.72 E-value=0.59 Score=37.01 Aligned_cols=39 Identities=13% Similarity=-0.056 Sum_probs=31.5
Q ss_pred CCCCCCceeecC-CCCcceEEeecceEEEEeCCCCCeEEEE
Q 044375 57 GALGPESIAFDP-NGDGPYTGVANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 57 ~~~GPEsiAfD~-~G~g~YTG~~DGrIlR~~~~~~~w~~fA 96 (116)
...+|.++++|+ +| .+|....+|+|.||+.++.....++
T Consensus 217 ~~~~p~~iav~p~~g-~lyv~d~~~~I~~~d~~~~~~~~~~ 256 (409)
T 3hrp_A 217 FSGKIGAVALDETEE-WLYFVDSNKNFGRFNVKTQEVTLIK 256 (409)
T ss_dssp SCSCCCBCEECTTSS-EEEEECTTCEEEEEETTTCCEEEEE
T ss_pred hcCCcEEEEEeCCCC-eEEEEECCCcEEEEECCCCCEEEEe
Confidence 456899999999 56 5999888999999998766555554
No 29
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.60 E-value=0.33 Score=40.27 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=25.9
Q ss_pred CCCCCceeecCCCCcceEEeec------------------ceEEEEeCCCC
Q 044375 58 ALGPESIAFDPNGDGPYTGVAN------------------GRILKWQGDEL 90 (116)
Q Consensus 58 ~~GPEsiAfD~~G~g~YTG~~D------------------GrIlR~~~~~~ 90 (116)
.+.--.|+|++||. +|.++.| |+|+|+++++.
T Consensus 138 ~H~g~~l~fgpDG~-LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~ 187 (463)
T 2wg3_C 138 KHLGGQLLFGPDGF-LYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTD 187 (463)
T ss_dssp SSCEEEEEECTTSC-EEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCC
T ss_pred cccCCcEeECCCCc-EEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCC
Confidence 34556799999997 9999876 67999999873
No 30
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=89.37 E-value=0.72 Score=34.37 Aligned_cols=39 Identities=21% Similarity=0.363 Sum_probs=29.3
Q ss_pred CCCCCCceeecC-CCCcceEEe--ecceEEEEeCCCCCeEEEE
Q 044375 57 GALGPESIAFDP-NGDGPYTGV--ANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 57 ~~~GPEsiAfD~-~G~g~YTG~--~DGrIlR~~~~~~~w~~fA 96 (116)
....|.+++||+ +|. +|... .+++|.+|+.++.-...|.
T Consensus 141 ~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~~~~g~~~~~~~ 182 (329)
T 3fvz_A 141 HFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQFSPSGKFVTQWG 182 (329)
T ss_dssp CCSSEEEEEECTTTCC-EEEEECSSCCEEEEECTTSCEEEEEC
T ss_pred ccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEEcCCCCEEEEec
Confidence 345799999999 786 88877 4899999997765444443
No 31
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=89.27 E-value=0.46 Score=33.37 Aligned_cols=37 Identities=8% Similarity=0.113 Sum_probs=29.7
Q ss_pred CCCCCceeecCCCCcceEEee-cceEEEEeCCCCCeEEEE
Q 044375 58 ALGPESIAFDPNGDGPYTGVA-NGRILKWQGDELGWTEFA 96 (116)
Q Consensus 58 ~~GPEsiAfD~~G~g~YTG~~-DGrIlR~~~~~~~w~~fA 96 (116)
...|.++++|++|. +|.+.. +|+|.+|+.++ .+..|.
T Consensus 56 ~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g-~~~~~~ 93 (299)
T 2z2n_A 56 DAKVMCLTISSDGE-VWFTENAANKIGRITKKG-IIKEYT 93 (299)
T ss_dssp TCCEEEEEECTTSC-EEEEETTTTEEEEECTTS-CEEEEE
T ss_pred cCceeeEEECCCCC-EEEeCCCCCeEEEECCCC-cEEEEe
Confidence 46899999999997 887766 79999999764 466665
No 32
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=88.98 E-value=0.26 Score=38.48 Aligned_cols=33 Identities=24% Similarity=0.471 Sum_probs=28.5
Q ss_pred CCCCCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 57 GALGPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
++..|.+|+|+++|+.+|.+-.+|+|++++.++
T Consensus 16 ~l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g 48 (353)
T 2g8s_A 16 KLDHPWALAFLPDNHGMLITLRGGELRHWQAGK 48 (353)
T ss_dssp EESSEEEEEECSTTCCEEEEETTTEEEEEETTT
T ss_pred CCCCcEEEEEcCCCCEEEEEeCCceEEEEeCCC
Confidence 467999999999996589999999999998654
No 33
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=88.91 E-value=0.56 Score=33.47 Aligned_cols=39 Identities=15% Similarity=0.144 Sum_probs=29.7
Q ss_pred CCCCCCCceeecCCCCcceEEe-ecceEEEEeCCCCCeEEE
Q 044375 56 TGALGPESIAFDPNGDGPYTGV-ANGRILKWQGDELGWTEF 95 (116)
Q Consensus 56 ~~~~GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~~~~w~~f 95 (116)
+....|.++++|++|+ +|.+. .+++|.+|+.++.....|
T Consensus 118 ~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~~~~~ 157 (286)
T 1q7f_A 118 TILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGNVLHKF 157 (286)
T ss_dssp TTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEEEEE
T ss_pred ccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCCEEEEe
Confidence 4456899999999997 88775 579999999766444444
No 34
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=88.89 E-value=0.37 Score=38.01 Aligned_cols=49 Identities=20% Similarity=0.219 Sum_probs=39.3
Q ss_pred cccCccc-cccCceeeccCCCCCCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 39 CIEGSNN-NLEGSRIIQVTGALGPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 39 ~i~a~N~-~L~~ae~l~~~~~~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
+....|+ -+.++.++.-++...-.++||+++|. +|+. .+|.++|+++..
T Consensus 20 ~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~-LYaV-~~G~Ly~~~~~t 69 (236)
T 1tl2_A 20 YPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGE-LYGV-LNDKIYKGTPPT 69 (236)
T ss_dssp CCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSC-EEEE-ETTEEEEESCCC
T ss_pred CCCCcccchhhhccccCccccccceeEEECCCcc-EEEE-eCCeEEEECCCC
Confidence 3344553 34678888887788999999999997 9999 999999998744
No 35
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=88.80 E-value=0.4 Score=35.62 Aligned_cols=37 Identities=11% Similarity=0.108 Sum_probs=29.2
Q ss_pred CCCCceeecCCCCcceEEeec-----------ceEEEEeCCCCCeEEEE
Q 044375 59 LGPESIAFDPNGDGPYTGVAN-----------GRILKWQGDELGWTEFA 96 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~D-----------GrIlR~~~~~~~w~~fA 96 (116)
.||..+++|++|+ +|.+... ++|+++++++.-...|.
T Consensus 229 ~gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~ 276 (322)
T 2fp8_A 229 PNPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIP 276 (322)
T ss_dssp SSEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEE
T ss_pred CCCCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCEEEEEE
Confidence 4699999999997 9999865 89999998764344443
No 36
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=88.80 E-value=0.29 Score=37.76 Aligned_cols=31 Identities=19% Similarity=0.362 Sum_probs=26.1
Q ss_pred CCCCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 58 ALGPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 58 ~~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
...||.||||++|. +|-...--.++|+....
T Consensus 223 ~~qpEGia~d~~G~-lyIvsE~n~~y~f~~~~ 253 (255)
T 3qqz_A 223 IKQAEGVAMDASGN-IYIVSEPNRFYRFTPQS 253 (255)
T ss_dssp CCSEEEEEECTTCC-EEEEETTTEEEEEEC--
T ss_pred cCCCCeeEECCCCC-EEEEcCCceEEEEEecC
Confidence 46899999999997 99999888999987653
No 37
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=88.57 E-value=0.3 Score=34.88 Aligned_cols=27 Identities=22% Similarity=0.532 Sum_probs=23.5
Q ss_pred CceeecCCCCcceEEeecceEEEEeCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~ 88 (116)
-+++|.++|+.++||..||.|.-|+-.
T Consensus 310 ~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 310 TSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 467999999999999999999988753
No 38
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=88.44 E-value=0.74 Score=32.18 Aligned_cols=38 Identities=13% Similarity=0.235 Sum_probs=30.4
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC-CCeEEEEE
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE-LGWTEFAV 97 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~-~~w~~fA~ 97 (116)
.-.+++|.++|+.++||..||.|.-|+-.. ..|..+..
T Consensus 308 ~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 346 (351)
T 3f3f_A 308 EVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSV 346 (351)
T ss_dssp CEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred cEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhheee
Confidence 457789999999899999999999998743 45666554
No 39
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=87.89 E-value=0.86 Score=32.31 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=28.5
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDEL 90 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~ 90 (116)
.+|.+++|+++|+.+|++..||.|..|+....
T Consensus 280 ~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 280 HSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp SCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred CceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 57999999999988999999999999997653
No 40
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=87.28 E-value=0.56 Score=34.35 Aligned_cols=36 Identities=22% Similarity=0.288 Sum_probs=28.6
Q ss_pred CCCCCceeecCCCCcceEEee---cceEEEEeCCCCCeEE
Q 044375 58 ALGPESIAFDPNGDGPYTGVA---NGRILKWQGDELGWTE 94 (116)
Q Consensus 58 ~~GPEsiAfD~~G~g~YTG~~---DGrIlR~~~~~~~w~~ 94 (116)
...|..++|+++|+ +|++.. ||.|..|+.++..++.
T Consensus 39 ~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~ 77 (347)
T 3hfq_A 39 TQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHK 77 (347)
T ss_dssp CSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEE
T ss_pred cCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEE
Confidence 46899999999998 999887 6899999875444433
No 41
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=87.16 E-value=0.91 Score=31.81 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=30.6
Q ss_pred CCCCCceeecCCCCcceEEee-cceEEEEeCCCCCeEEEEE
Q 044375 58 ALGPESIAFDPNGDGPYTGVA-NGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 58 ~~GPEsiAfD~~G~g~YTG~~-DGrIlR~~~~~~~w~~fA~ 97 (116)
...|.++++|++|. +|.+.. +|+|.+++.+ ..+..|..
T Consensus 61 ~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~-g~~~~~~~ 99 (300)
T 2qc5_A 61 DAKVMCLIVSSLGD-IWFTENGANKIGKLSKK-GGFTEYPL 99 (300)
T ss_dssp TCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEEC
T ss_pred CCcceeEEECCCCC-EEEEecCCCeEEEECCC-CCeEEecC
Confidence 46899999999997 888876 7899999987 45666654
No 42
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=86.58 E-value=0.5 Score=33.39 Aligned_cols=27 Identities=19% Similarity=0.363 Sum_probs=23.6
Q ss_pred CceeecCCCCcceEEeecceEEEEeCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~ 88 (116)
-+++|.++|+.++||..||.|.-|+-.
T Consensus 288 ~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 288 LSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp EEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 467999999989999999999999754
No 43
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=86.21 E-value=2 Score=32.44 Aligned_cols=42 Identities=12% Similarity=0.046 Sum_probs=31.0
Q ss_pred CCCCCCCceeecCCCCcceEE-eecceEEEEeCCCCCeEEEEE
Q 044375 56 TGALGPESIAFDPNGDGPYTG-VANGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 56 ~~~~GPEsiAfD~~G~g~YTG-~~DGrIlR~~~~~~~w~~fA~ 97 (116)
.++..|+.+|+|..++.+|.. ..+++|.+++.++.....+..
T Consensus 74 ~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 116 (316)
T 1ijq_A 74 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR 116 (316)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE
T ss_pred CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE
Confidence 456799999999765569876 567899999887655454443
No 44
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=86.08 E-value=0.74 Score=34.14 Aligned_cols=30 Identities=20% Similarity=0.387 Sum_probs=25.9
Q ss_pred CCCCceeecCCCCcceEEee-cceEEEEeCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVA-NGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~-DGrIlR~~~~~ 89 (116)
..|..|++|++|+ +|.+.. .++|.++++++
T Consensus 212 ~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~G 242 (306)
T 2p4o_A 212 TNIDDFAFDVEGN-LYGATHIYNSVVRIAPDR 242 (306)
T ss_dssp CCCSSEEEBTTCC-EEEECBTTCCEEEECTTC
T ss_pred CCCCCeEECCCCC-EEEEeCCCCeEEEECCCC
Confidence 4799999999997 898876 58999999864
No 45
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=86.06 E-value=0.82 Score=33.23 Aligned_cols=36 Identities=22% Similarity=0.458 Sum_probs=28.0
Q ss_pred CCCCceeecCCCCcceEEee-cceEEEEeCCCCCeEEE
Q 044375 59 LGPESIAFDPNGDGPYTGVA-NGRILKWQGDELGWTEF 95 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~-DGrIlR~~~~~~~w~~f 95 (116)
..|..+++|++|+ +|.+.. +|+|.+|++++.....+
T Consensus 233 ~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~g~~~~~~ 269 (333)
T 2dg1_A 233 EGPDSCCIDSDDN-LYVAMYGQGRVLVFNKRGYPIGQI 269 (333)
T ss_dssp SEEEEEEEBTTCC-EEEEEETTTEEEEECTTSCEEEEE
T ss_pred CCCCceEECCCCC-EEEEEcCCCEEEEECCCCCEEEEE
Confidence 4688999999997 898875 68999999865434444
No 46
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=85.93 E-value=1.2 Score=32.75 Aligned_cols=49 Identities=16% Similarity=0.108 Sum_probs=35.6
Q ss_pred CceeeccCCCCCCCceeecCCCC-cceEEeecceEEEEeCCCCCeEEEEEcC
Q 044375 49 GSRIIQVTGALGPESIAFDPNGD-GPYTGVANGRILKWQGDELGWTEFAVTT 99 (116)
Q Consensus 49 ~ae~l~~~~~~GPEsiAfD~~G~-g~YTG~~DGrIlR~~~~~~~w~~fA~Ts 99 (116)
..|.+..+ ..-+|..+++++|+ -++++..+|+|.||+.++ ....|...+
T Consensus 36 ~~~~l~~~-~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-~~~~~~~~~ 85 (305)
T 3dr2_A 36 RLLTLYDQ-ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-TVDVLLDAT 85 (305)
T ss_dssp CCEEEECC-CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-CEEEEEESC
T ss_pred ceEEEecC-CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-CEEEEeCCC
Confidence 34445444 45689999999987 478888999999999854 466665443
No 47
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=85.79 E-value=1.7 Score=31.15 Aligned_cols=40 Identities=25% Similarity=0.214 Sum_probs=29.5
Q ss_pred CCCCCCceeecCCCCcceEEeec---ceEEEEeCCCCCeEEEE
Q 044375 57 GALGPESIAFDPNGDGPYTGVAN---GRILKWQGDELGWTEFA 96 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~YTG~~D---GrIlR~~~~~~~w~~fA 96 (116)
+..+|.++++|++++.+|..... ++|.++..++...+.+.
T Consensus 120 ~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~ 162 (267)
T 1npe_A 120 GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILA 162 (267)
T ss_dssp SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEE
T ss_pred CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEE
Confidence 45789999999965559988754 79999987765444443
No 48
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=85.44 E-value=0.55 Score=34.66 Aligned_cols=26 Identities=27% Similarity=0.543 Sum_probs=23.4
Q ss_pred CceeecCCCCcceEEeecceEEEEeC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQG 87 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~ 87 (116)
-+++|.++|+.+++|..||.|.-|+-
T Consensus 290 ~~~~~spdg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 290 VSLAWSADGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred eEEEECCCCCEEEEeecCceEEEEEE
Confidence 37899999999999999999988874
No 49
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=85.28 E-value=0.72 Score=33.16 Aligned_cols=32 Identities=22% Similarity=0.354 Sum_probs=28.2
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDEL 90 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~ 90 (116)
..|.+++++++|+.+|++..||+|..|+....
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~ 216 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNADGELITIDTADN 216 (353)
T ss_dssp TTCCCCEEETTTTEEEEECTTSEEEEEETTTT
T ss_pred CccceEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 45999999999988999999999999987643
No 50
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=85.11 E-value=1.8 Score=30.69 Aligned_cols=38 Identities=16% Similarity=0.117 Sum_probs=28.5
Q ss_pred CCCceeecCCCCcceEEe-ecceEEEE--eCCCCCeEEEEE
Q 044375 60 GPESIAFDPNGDGPYTGV-ANGRILKW--QGDELGWTEFAV 97 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~-~DGrIlR~--~~~~~~w~~fA~ 97 (116)
+|.+++|+++|+.+|++. .||.|.-| +.....++....
T Consensus 278 ~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 278 QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGR 318 (343)
T ss_dssp SCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEE
T ss_pred ccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccc
Confidence 499999999998899998 57888777 544444655443
No 51
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=84.64 E-value=1.2 Score=32.86 Aligned_cols=38 Identities=18% Similarity=0.329 Sum_probs=29.3
Q ss_pred cCCCCCCCceeecCCCCcceEEe-ecceEEEEeCCCCCe
Q 044375 55 VTGALGPESIAFDPNGDGPYTGV-ANGRILKWQGDELGW 92 (116)
Q Consensus 55 ~~~~~GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~~~~w 92 (116)
.....||.+++|+++|+.+|++. .+++|..|+.+...+
T Consensus 207 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 207 VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML 245 (361)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE
T ss_pred cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce
Confidence 34456899999999998788887 589998887654333
No 52
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=84.42 E-value=1.7 Score=30.97 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=26.2
Q ss_pred CCCCceeecCCCCcceEEeec----------------ceEEEEeCCCCCeEE
Q 044375 59 LGPESIAFDPNGDGPYTGVAN----------------GRILKWQGDELGWTE 94 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~D----------------GrIlR~~~~~~~w~~ 94 (116)
..|.++++|++|+ +|.+... ++|++++.+ .....
T Consensus 117 ~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 117 QGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp BCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred cCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 4689999999997 8887753 799999876 34443
No 53
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=84.05 E-value=1.9 Score=30.58 Aligned_cols=37 Identities=19% Similarity=0.187 Sum_probs=29.2
Q ss_pred CCCCCceeecCCCCcceEEeec-ceEEEEeCC--CCCeEE
Q 044375 58 ALGPESIAFDPNGDGPYTGVAN-GRILKWQGD--ELGWTE 94 (116)
Q Consensus 58 ~~GPEsiAfD~~G~g~YTG~~D-GrIlR~~~~--~~~w~~ 94 (116)
...|..++|+++|+.+|++..+ |.|..|+-+ +..+..
T Consensus 37 ~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~ 76 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTF 76 (343)
T ss_dssp SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceee
Confidence 3579999999999889999987 899888765 444443
No 54
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=83.93 E-value=2.6 Score=30.67 Aligned_cols=35 Identities=11% Similarity=-0.035 Sum_probs=26.3
Q ss_pred CCCCceeecCCCCcceEEeec-ceEEEE--eCCCCCeE
Q 044375 59 LGPESIAFDPNGDGPYTGVAN-GRILKW--QGDELGWT 93 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~D-GrIlR~--~~~~~~w~ 93 (116)
..|.+++|++||+.+|++..+ ++|..| +......+
T Consensus 286 ~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 286 DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 479999999999889998876 776666 55444444
No 55
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=83.47 E-value=2.1 Score=32.28 Aligned_cols=41 Identities=17% Similarity=0.084 Sum_probs=30.2
Q ss_pred CCCCCCCceeecCCCCcceEEeec--ceEEEEeCCCCCeEEEE
Q 044375 56 TGALGPESIAFDPNGDGPYTGVAN--GRILKWQGDELGWTEFA 96 (116)
Q Consensus 56 ~~~~GPEsiAfD~~G~g~YTG~~D--GrIlR~~~~~~~w~~fA 96 (116)
.....|.++|+|++++.+|..-.+ ++|.|++.++..-+.+.
T Consensus 117 ~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~ 159 (316)
T 1ijq_A 117 ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 159 (316)
T ss_dssp CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEE
Confidence 456789999999865568876543 79999988776555544
No 56
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=83.35 E-value=2.8 Score=29.92 Aligned_cols=40 Identities=23% Similarity=0.095 Sum_probs=29.0
Q ss_pred CCCCCCCceeecCCCCcceEEe-ecceEEEEeCCCCCeEEE
Q 044375 56 TGALGPESIAFDPNGDGPYTGV-ANGRILKWQGDELGWTEF 95 (116)
Q Consensus 56 ~~~~GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~~~~w~~f 95 (116)
.+..+|+.+++|++++.+|..- .+++|.+++.++.....+
T Consensus 76 ~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 76 QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 3457999999999765688664 468999988776443333
No 57
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=83.31 E-value=1.2 Score=35.10 Aligned_cols=41 Identities=15% Similarity=-0.164 Sum_probs=31.5
Q ss_pred CCCCCCceeecCCCCcceEEee-cceEEEEeCCCCCeEEEEEc
Q 044375 57 GALGPESIAFDPNGDGPYTGVA-NGRILKWQGDELGWTEFAVT 98 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~YTG~~-DGrIlR~~~~~~~w~~fA~T 98 (116)
++..|..+++|++|+ +|.... +++|.+|+.++.....+...
T Consensus 129 ~~~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~~~~~~~ 170 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKVTTVHPG 170 (409)
T ss_dssp CCCCEEEEEECSTTE-EEEEETTTTEEEEEETTTTEEEEEEET
T ss_pred ccCCceEEEEeCCCC-EEEEecCCCcEEEEECCCCEEEEeecc
Confidence 456899999999997 887765 58999999876555555443
No 58
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=83.18 E-value=1.4 Score=31.52 Aligned_cols=31 Identities=26% Similarity=0.337 Sum_probs=27.6
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.+|.+++|+++|+.+|++..||.|..|+...
T Consensus 295 ~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 295 HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp SCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred CCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 4789999999998899999999999999754
No 59
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=83.17 E-value=0.93 Score=33.58 Aligned_cols=26 Identities=23% Similarity=0.442 Sum_probs=23.2
Q ss_pred CceeecCCCCcceEEeecceEEEEeC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQG 87 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~ 87 (116)
.+++|+++|..+++|..||.|.-|+-
T Consensus 313 ~~~~~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 313 TSLAWNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp EEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred EEEEECCCCCeEEEecCCceEEEEEE
Confidence 47899999999999999999988864
No 60
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=82.98 E-value=1.8 Score=31.74 Aligned_cols=38 Identities=13% Similarity=0.087 Sum_probs=30.9
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCCCCeEEEEEc
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAVT 98 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA~T 98 (116)
..|..++++++|+ +|.+. +++|.+|+.+...++.++..
T Consensus 54 ~~~~~i~~~~dG~-l~v~~-~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 54 APVSSVALRQSGG-YVATI-GTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp SCEEEEEEBTTSS-EEEEE-TTEEEEEETTTTEEEEEEEC
T ss_pred CceEEEEECCCCC-EEEEE-CCeEEEEECCCCcEEEEEec
Confidence 3688999999998 99987 67899999876667776654
No 61
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=82.83 E-value=1.4 Score=35.55 Aligned_cols=39 Identities=15% Similarity=-0.090 Sum_probs=30.8
Q ss_pred CCCCCCceeecCC---CCcceEEeecceEEEEeCCCCCeEEEE
Q 044375 57 GALGPESIAFDPN---GDGPYTGVANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 57 ~~~GPEsiAfD~~---G~g~YTG~~DGrIlR~~~~~~~w~~fA 96 (116)
++..|+.+++|++ |. +|..-..++|.|+++.+.....++
T Consensus 137 ~~~~P~gvavd~~s~~g~-Lyv~D~~~~I~~id~~~g~v~~~~ 178 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDD-LYWVGQRDAFRHVDFVNQYVDIKT 178 (433)
T ss_dssp CCSCCCEEEECTTTTTCE-EEEECBTSCEEEEETTTTEEEEEC
T ss_pred ccCCCceEEEccccCCCE-EEEEeCCCCEEEEECCCCEEEEee
Confidence 5678999999984 65 999877799999998655555554
No 62
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=82.59 E-value=1.1 Score=31.83 Aligned_cols=28 Identities=21% Similarity=0.536 Sum_probs=25.0
Q ss_pred CceeecCCCCcceEEeecceEEEEeCCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.+++|.++|+.+++|..||.|.-|+...
T Consensus 219 ~~~~~s~~~~~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 219 NTVTVSPDGSLCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp EEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEEecc
Confidence 5789999999899999999999998654
No 63
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=82.37 E-value=2.9 Score=29.52 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=26.8
Q ss_pred CCCceeecCCCCcceEEe------------ecceEEEEeCCCC
Q 044375 60 GPESIAFDPNGDGPYTGV------------ANGRILKWQGDEL 90 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~------------~DGrIlR~~~~~~ 90 (116)
+|.+++++++|+.+|++. .|++|..|+....
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 125 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL 125 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC
Confidence 799999999998799986 5799999997653
No 64
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=82.34 E-value=1.7 Score=32.75 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=27.2
Q ss_pred CCCceeecCCCCcceEEe-ecceEEEEeCCCCCeEEEEE
Q 044375 60 GPESIAFDPNGDGPYTGV-ANGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~~~~w~~fA~ 97 (116)
.|..+++|++|. +|.+. .+++|.+|++.+..+..++.
T Consensus 249 ~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G~~~~~~~ 286 (343)
T 2qe8_A 249 ICDGISIDKDHN-IYVGDLAHSAIGVITSADRAYKLLVT 286 (343)
T ss_dssp SCSCEEECTTCC-EEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred CCceEEECCCCC-EEEEccCCCeEEEEECCCCCEEEEEE
Confidence 689999999997 66654 57899999982334555543
No 65
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=82.31 E-value=1.1 Score=32.51 Aligned_cols=27 Identities=15% Similarity=0.119 Sum_probs=24.1
Q ss_pred CceeecCCCCcceEEeecceEEEEeCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~ 88 (116)
-+++|+++|+.+.||..||.|.-|+.+
T Consensus 13 ~~~~~s~~g~~las~s~D~~v~iw~~~ 39 (297)
T 2pm7_B 13 HDAVMDYYGKRMATCSSDKTIKIFEVE 39 (297)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEBC
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEecC
Confidence 478999999999999999999999764
No 66
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=81.64 E-value=1.5 Score=34.17 Aligned_cols=29 Identities=17% Similarity=0.454 Sum_probs=25.0
Q ss_pred CceeecCCCCcceEEeecceEEEEeCCCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGDEL 90 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~~~ 90 (116)
-++||.+||+-+.||..||.|.-|+..+.
T Consensus 20 ~~~a~spdg~~las~~~d~~v~iWd~~~~ 48 (577)
T 2ymu_A 20 RGVAFSPDGQTIASASDDKTVKLWNRNGQ 48 (577)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEECTTSC
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 46899999998999999999999986543
No 67
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=81.11 E-value=1.2 Score=33.67 Aligned_cols=28 Identities=14% Similarity=0.317 Sum_probs=24.9
Q ss_pred CceeecCCCCcceEEeecceEEEEeCCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
-+++|.++|..++||..||.|.-|+-.+
T Consensus 348 ~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 348 SCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred EEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 5689999999999999999999998654
No 68
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=80.99 E-value=1.5 Score=30.85 Aligned_cols=27 Identities=19% Similarity=0.389 Sum_probs=24.4
Q ss_pred ceeecCCCCcceEEeecceEEEEeCCC
Q 044375 63 SIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 63 siAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
+++|.++|+.+.+|..||.|.-|+...
T Consensus 72 ~v~~~~~~~~l~sgs~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 72 SVAWIKEGNYLAVGTSSAEVQLWDVQQ 98 (318)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEECCCCCEEEEEECCCcEEEeecCC
Confidence 689999999999999999999998754
No 69
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=80.97 E-value=1.4 Score=32.07 Aligned_cols=30 Identities=23% Similarity=0.397 Sum_probs=26.2
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.-.+++|.++|..+.||..||.|.-|+...
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~ 44 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYET 44 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 446889999999899999999999998754
No 70
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=80.35 E-value=1.8 Score=31.05 Aligned_cols=39 Identities=10% Similarity=0.176 Sum_probs=29.7
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCC-CCCeEEEEEc
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGD-ELGWTEFAVT 98 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~-~~~w~~fA~T 98 (116)
..-+++|+++|+.+++|..||.|.-|+-. +..|..+...
T Consensus 258 ~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 297 (379)
T 3jrp_A 258 VLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEV 297 (379)
T ss_dssp CEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEEEEE
T ss_pred cEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCccccccce
Confidence 34577999999999999999999988764 3456655443
No 71
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=80.26 E-value=1.7 Score=30.96 Aligned_cols=30 Identities=30% Similarity=0.413 Sum_probs=26.1
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
...+++|.++|+.+++|..||.|.-|+-..
T Consensus 275 ~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVGSDGRFSFWDKDA 304 (368)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred ceEEEEEecCCCEEEEEccCCeEEEEECCC
Confidence 356789999998899999999999998754
No 72
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=79.80 E-value=3 Score=30.55 Aligned_cols=37 Identities=5% Similarity=0.192 Sum_probs=28.6
Q ss_pred CceeecCCCCcceEEeecceEEEEeCC-CCCeEEEEEc
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGD-ELGWTEFAVT 98 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~-~~~w~~fA~T 98 (116)
-+++|.++|+.+.+|..||.|.-|+.. +..|......
T Consensus 266 ~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~~ 303 (316)
T 3bg1_A 266 WHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303 (316)
T ss_dssp EEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEEC
T ss_pred EEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeeec
Confidence 478999999889999999999999864 3357654433
No 73
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=79.63 E-value=3.6 Score=30.21 Aligned_cols=29 Identities=10% Similarity=0.123 Sum_probs=24.0
Q ss_pred CCCCCCceeecCCCCcceEEeec----ceEEEE
Q 044375 57 GALGPESIAFDPNGDGPYTGVAN----GRILKW 85 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~YTG~~D----GrIlR~ 85 (116)
....|..++|+++|+-+|++..| |+|..|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~ 80 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAF 80 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEE
Confidence 45689999999999889999986 777544
No 74
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=79.48 E-value=1.3 Score=33.76 Aligned_cols=26 Identities=19% Similarity=0.435 Sum_probs=23.2
Q ss_pred CceeecCCCCcceEEeecceEEEEeC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQG 87 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~ 87 (116)
-+++|.++|.-+.||..||.|.-|+-
T Consensus 368 ~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 368 LSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp EEEEECTTSSCEEEEETTTEEEEECC
T ss_pred EEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 46899999999999999999999875
No 75
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=79.46 E-value=1.9 Score=33.03 Aligned_cols=34 Identities=15% Similarity=0.052 Sum_probs=27.4
Q ss_pred eeccCCCCCCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 52 IIQVTGALGPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 52 ~l~~~~~~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.+..+. |.+|+|++||+.+|++.. +.|.-|+...
T Consensus 301 ~i~~~~---p~~ia~spdg~~l~v~n~-~~v~v~D~~t 334 (361)
T 2oiz_A 301 RIPGRD---ALSMTIDQQRNLMLTLDG-GNVNVYDISQ 334 (361)
T ss_dssp EEECTT---CCEEEEETTTTEEEEECS-SCEEEEECSS
T ss_pred EEecCC---eeEEEECCCCCEEEEeCC-CeEEEEECCC
Confidence 344444 999999999999998886 9999998654
No 76
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=79.33 E-value=1.5 Score=30.58 Aligned_cols=29 Identities=17% Similarity=0.133 Sum_probs=25.2
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~ 88 (116)
.--+++|+++|..+++|..||.|.-|+..
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 41 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLD 41 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEEC
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECC
Confidence 44678999999889999999999999765
No 77
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=79.17 E-value=1.9 Score=30.72 Aligned_cols=30 Identities=23% Similarity=0.365 Sum_probs=26.1
Q ss_pred CCCceeecCCCCcceEEeec------------ceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVAN------------GRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~D------------GrIlR~~~~~ 89 (116)
.|.+++|+++|+.+|++..| +.|..|+...
T Consensus 93 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 93 SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp CSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred cccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC
Confidence 38999999999889999987 9999998643
No 78
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=79.11 E-value=2.3 Score=30.45 Aligned_cols=33 Identities=3% Similarity=-0.180 Sum_probs=27.0
Q ss_pred CCCCCceeecCCCCcceEEee-cceEEEEeCCCCC
Q 044375 58 ALGPESIAFDPNGDGPYTGVA-NGRILKWQGDELG 91 (116)
Q Consensus 58 ~~GPEsiAfD~~G~g~YTG~~-DGrIlR~~~~~~~ 91 (116)
...| +++|+++|+.+|++.. |++|..|+.....
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~ 73 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP 73 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 4466 9999999987888877 8999999986544
No 79
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=79.00 E-value=4.8 Score=30.97 Aligned_cols=44 Identities=23% Similarity=0.096 Sum_probs=30.6
Q ss_pred eeccCCCCCCCceeecCCCCcceEEee-cceEEEEeCCCCCeEEE
Q 044375 52 IIQVTGALGPESIAFDPNGDGPYTGVA-NGRILKWQGDELGWTEF 95 (116)
Q Consensus 52 ~l~~~~~~GPEsiAfD~~G~g~YTG~~-DGrIlR~~~~~~~w~~f 95 (116)
.+...+...|+.+|+|..++.+|..-. .++|.+++.++...+.+
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l 153 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 153 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE
Confidence 333345678999999986556887654 57899988776544433
No 80
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=78.96 E-value=2.5 Score=30.33 Aligned_cols=32 Identities=25% Similarity=0.351 Sum_probs=26.8
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDELG 91 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~ 91 (116)
.--+++|.++|+.+++|..||.|.-|+.....
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 56 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 56 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc
Confidence 44678999999989999999999999875443
No 81
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=78.83 E-value=1.5 Score=31.26 Aligned_cols=28 Identities=11% Similarity=0.249 Sum_probs=24.5
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQG 87 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~ 87 (116)
.-.+++|.++|+.+++|..||.|.-|+-
T Consensus 337 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 337 AIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred ceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 4457899999999999999999999974
No 82
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=78.83 E-value=3.2 Score=32.02 Aligned_cols=43 Identities=23% Similarity=0.122 Sum_probs=30.1
Q ss_pred eccCCCCCCCceeecCCCCcceEEee-c-ceEEEEeCCCCCeEEE
Q 044375 53 IQVTGALGPESIAFDPNGDGPYTGVA-N-GRILKWQGDELGWTEF 95 (116)
Q Consensus 53 l~~~~~~GPEsiAfD~~G~g~YTG~~-D-GrIlR~~~~~~~w~~f 95 (116)
+....+..|.++|+|++++.+|-.-. + ++|.|++.++...+.+
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 197 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII 197 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEES
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence 33356678999999986556886643 3 8999998776544433
No 83
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=78.78 E-value=1.3 Score=33.02 Aligned_cols=31 Identities=23% Similarity=0.426 Sum_probs=25.9
Q ss_pred ceeecCCCCcceEEeecceEEEEeCCCCCeE
Q 044375 63 SIAFDPNGDGPYTGVANGRILKWQGDELGWT 93 (116)
Q Consensus 63 siAfD~~G~g~YTG~~DGrIlR~~~~~~~w~ 93 (116)
.++|.++|..+.||..||.|.-|+..+..|.
T Consensus 21 ~l~~sp~g~~las~~~D~~i~iw~~~~~~~~ 51 (345)
T 3fm0_A 21 FLAWNPAGTLLASCGGDRRIRIWGTEGDSWI 51 (345)
T ss_dssp EEEECTTSSCEEEEETTSCEEEEEEETTEEE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEEcCCCcce
Confidence 6899999998999999999999976554443
No 84
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=78.68 E-value=2.3 Score=30.82 Aligned_cols=33 Identities=12% Similarity=0.301 Sum_probs=26.5
Q ss_pred CceeecCCCCcceEEeecceEEEEeCC-CCCeEE
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGD-ELGWTE 94 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~-~~~w~~ 94 (116)
.+++|.++|+.+.+|..||.|.-|+.. ...|+.
T Consensus 258 ~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~ 291 (297)
T 2pm7_B 258 WRASWSLSGNVLALSGGDNKVTLWKENLEGKWEP 291 (297)
T ss_dssp EEEEECSSSCCEEEEETTSCEEEEEECTTSCEEE
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEe
Confidence 467999999989999999999989764 334764
No 85
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=78.63 E-value=2.8 Score=29.82 Aligned_cols=30 Identities=10% Similarity=0.245 Sum_probs=26.0
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.--+++|.++|..+++|..||.|.-|+...
T Consensus 34 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 63 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKDSSASVWYSLN 63 (369)
T ss_dssp CEEEEEECTTSCEEEEEESSSCEEEEETTT
T ss_pred eEEEEEEcCCCCEEEEEeCCCEEEEEeCCC
Confidence 456789999999899999999999998654
No 86
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=78.47 E-value=2.3 Score=31.86 Aligned_cols=31 Identities=16% Similarity=0.257 Sum_probs=25.5
Q ss_pred CCCCceeecCCCCcceEEee-cceEEEEeCCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVA-NGRILKWQGDEL 90 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~-DGrIlR~~~~~~ 90 (116)
..|..+++|++|. +|.+.. +|+|.+|++++.
T Consensus 230 ~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g~ 261 (326)
T 2ghs_A 230 GGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGN 261 (326)
T ss_dssp SEEEEEEECTTSC-EEEEEETTTEEEEECTTCC
T ss_pred CCCCeeEECCCCC-EEEEEeCCCEEEEECCCCC
Confidence 3588899999997 998875 589999998654
No 87
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=78.30 E-value=4.8 Score=31.44 Aligned_cols=44 Identities=25% Similarity=0.138 Sum_probs=31.4
Q ss_pred eccCCCCCCCceeecCCCCcceEEee-c-ceEEEEeCCCCCeEEEE
Q 044375 53 IQVTGALGPESIAFDPNGDGPYTGVA-N-GRILKWQGDELGWTEFA 96 (116)
Q Consensus 53 l~~~~~~GPEsiAfD~~G~g~YTG~~-D-GrIlR~~~~~~~w~~fA 96 (116)
+...++..|.+||+|++++.+|-.-. + ++|.|++.++.....+.
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 241 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 241 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence 33355678999999986656887643 3 79999988775555444
No 88
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=78.08 E-value=2.2 Score=30.47 Aligned_cols=30 Identities=30% Similarity=0.402 Sum_probs=26.2
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
...+++|.++|+.+++|..||.|.-|+...
T Consensus 253 ~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred eEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 455789999998899999999999998764
No 89
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=78.01 E-value=3 Score=31.07 Aligned_cols=31 Identities=10% Similarity=0.010 Sum_probs=26.5
Q ss_pred eeecCCCCcceEEeecceEEEEeCCCCCeEE
Q 044375 64 IAFDPNGDGPYTGVANGRILKWQGDELGWTE 94 (116)
Q Consensus 64 iAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~ 94 (116)
++|.++|..+++|..||.|.-|+-.......
T Consensus 348 ~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 348 CCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp EEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred EEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 8999999989999999999999987654443
No 90
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=77.65 E-value=1.9 Score=32.88 Aligned_cols=28 Identities=18% Similarity=0.378 Sum_probs=25.0
Q ss_pred CceeecCCCCcceEEeecceEEEEeCCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
-+++|.++|..+.+|..||.|.-|+...
T Consensus 151 ~sv~fspdg~~lasgs~Dg~v~iWd~~~ 178 (420)
T 4gga_A 151 SSVAWIKEGNYLAVGTSSAEVQLWDVQQ 178 (420)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEEECCCCCEEEEEECCCeEEEEEcCC
Confidence 3789999999999999999999998754
No 91
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=77.35 E-value=2.8 Score=35.72 Aligned_cols=48 Identities=17% Similarity=0.162 Sum_probs=36.3
Q ss_pred eeeccCCCCCCCceeecCCCCcce-EEeecceEEEEeCCCCCeEEEEEc
Q 044375 51 RIIQVTGALGPESIAFDPNGDGPY-TGVANGRILKWQGDELGWTEFAVT 98 (116)
Q Consensus 51 e~l~~~~~~GPEsiAfD~~G~g~Y-TG~~DGrIlR~~~~~~~w~~fA~T 98 (116)
..++++++..|..++||+.++.+| |-..+++|.|+..++...+.+..+
T Consensus 29 ~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~ 77 (628)
T 4a0p_A 29 VAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF 77 (628)
T ss_dssp EECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred eEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC
Confidence 345666778999999998655588 557789999999887666665544
No 92
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=77.26 E-value=1.7 Score=35.99 Aligned_cols=29 Identities=21% Similarity=0.137 Sum_probs=24.6
Q ss_pred CCCCceeecCCCCcceEEe--------ecceEEEEeCC
Q 044375 59 LGPESIAFDPNGDGPYTGV--------ANGRILKWQGD 88 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~--------~DGrIlR~~~~ 88 (116)
..|-+|++|+||. +|... .+|||+|+...
T Consensus 336 ~r~~~v~~~pdG~-Lyv~~~~~~~~~~~~G~I~Ri~~p 372 (463)
T 2wg3_C 336 GHILGFGEDELGE-VYILSSSKSMTQTHNGKLYKIVDP 372 (463)
T ss_dssp SEEEEEEECTTCC-EEEEEESSCGGGCSSEEEEEEECT
T ss_pred CcceEEEECCCCC-EEEEeccCCcccCCCCcEEEecCc
Confidence 3588999999997 99988 48999999843
No 93
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=77.21 E-value=2.8 Score=30.08 Aligned_cols=33 Identities=12% Similarity=0.023 Sum_probs=26.1
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCCCCeE
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDELGWT 93 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~ 93 (116)
--+++|.++|..+.+|..||.|.-|+-....+.
T Consensus 14 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 46 (379)
T 3jrp_A 14 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK 46 (379)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEEEETTEEE
T ss_pred EEEEEEcCCCCEEEEEECCCcEEEEecCCCcce
Confidence 456899999988999999999999986533333
No 94
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=77.08 E-value=1.7 Score=31.62 Aligned_cols=29 Identities=24% Similarity=0.414 Sum_probs=25.5
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
-.+++|.++|+.++||..||.|.-|+...
T Consensus 337 v~~~~~s~~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 337 VDCCVFQSNFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEEECC
T ss_pred EEEEEEcCCCCEEEEECCCCeEEEEeCCC
Confidence 35789999999899999999999998754
No 95
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=77.02 E-value=2.8 Score=31.37 Aligned_cols=47 Identities=17% Similarity=0.143 Sum_probs=32.6
Q ss_pred CceeeccCCCCCCCceeecCCC-CcceEEeecceEEEEeCCCCCeEEE
Q 044375 49 GSRIIQVTGALGPESIAFDPNG-DGPYTGVANGRILKWQGDELGWTEF 95 (116)
Q Consensus 49 ~ae~l~~~~~~GPEsiAfD~~G-~g~YTG~~DGrIlR~~~~~~~w~~f 95 (116)
++|.+......-||..++|+++ .-.+++..+|+|.+|+.++.....|
T Consensus 39 ~~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~ 86 (326)
T 2ghs_A 39 AGRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVH 86 (326)
T ss_dssp CCEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred ceEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 3566655455568999999974 4456777889999999876444433
No 96
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=76.96 E-value=2.6 Score=31.51 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=28.9
Q ss_pred CCCCCCceeecCCCCcceEEe-ecceEEEEeCCCCCe
Q 044375 57 GALGPESIAFDPNGDGPYTGV-ANGRILKWQGDELGW 92 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~~~~w 92 (116)
....|+.++++++|+ +|.+. .+++|.+|+......
T Consensus 82 ~~~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 82 GFTSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYEI 117 (328)
T ss_dssp CCSSEEEEEEEETTE-EEEEEBSCSEEEEEETTTTEE
T ss_pred CCCCCcEEEEeCCCe-EEEEECCCCeEEEEECCCCeE
Confidence 346899999988885 99998 899999999865443
No 97
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=76.91 E-value=5.2 Score=31.91 Aligned_cols=69 Identities=3% Similarity=-0.207 Sum_probs=43.3
Q ss_pred HhhhhcccCcCccCCCCCCccccCcccc------------ccC---ceeeccCCCCCCCceeecCCCCcceEEe------
Q 044375 19 SVIISINQTNTTLRNLFCAPCIEGSNNN------------LEG---SRIIQVTGALGPESIAFDPNGDGPYTGV------ 77 (116)
Q Consensus 19 ~~~~~~~~~~~~~~~~f~~~~i~a~N~~------------L~~---ae~l~~~~~~GPEsiAfD~~G~g~YTG~------ 77 (116)
+.-+..+.+....+|.+.++.++-.|.. +.. ...+..+ ..| .++|++||+-+|.+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG--~~P-~i~~spDg~~lyVan~~~~r~ 89 (368)
T 1mda_H 13 SAAAASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGA--FLS-LAVAGHSGSDFALASTSFARS 89 (368)
T ss_dssp HHTTCCCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC--TTC-EEEECTTSSCEEEEEEEETTT
T ss_pred ccccCCCccccccCCCCCCCeEEEECCccCCccceEEEEECCCCeEEEEEeCC--CCC-ceEECCCCCEEEEEccccccc
Confidence 3344555555566666555554433331 122 2334445 368 899999999999997
Q ss_pred ----ecceEEEEeCCCC
Q 044375 78 ----ANGRILKWQGDEL 90 (116)
Q Consensus 78 ----~DGrIlR~~~~~~ 90 (116)
.|+.|..|+....
T Consensus 90 ~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 90 AKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp TSSSEEEEEEEECTTTC
T ss_pred ccCCCCCEEEEEECCCC
Confidence 4788999987643
No 98
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=76.90 E-value=4.6 Score=28.35 Aligned_cols=32 Identities=16% Similarity=0.111 Sum_probs=26.4
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDELG 91 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~ 91 (116)
...+++|.++|+.+++|..||.|.-|+.....
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 130 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT 130 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC-
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC
Confidence 34578999999889999999999999876544
No 99
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=76.80 E-value=4.2 Score=30.41 Aligned_cols=33 Identities=12% Similarity=0.239 Sum_probs=26.6
Q ss_pred CCCCCceeecCCCCcceEEe-----ecceEEEEeCCCC
Q 044375 58 ALGPESIAFDPNGDGPYTGV-----ANGRILKWQGDEL 90 (116)
Q Consensus 58 ~~GPEsiAfD~~G~g~YTG~-----~DGrIlR~~~~~~ 90 (116)
..+|..+++|++++.+|.+. .+|+|.+|+.++.
T Consensus 266 ~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~ 303 (328)
T 3dsm_A 266 DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGK 303 (328)
T ss_dssp SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCC
T ss_pred CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCC
Confidence 35799999998544599885 6899999998854
No 100
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=76.51 E-value=2.4 Score=31.95 Aligned_cols=28 Identities=18% Similarity=0.442 Sum_probs=24.9
Q ss_pred CceeecCCCCcceEEeecceEEEEeCCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
-+++|.++|+.++||..||.|.-|+...
T Consensus 70 ~~~~~sp~~~~l~s~s~D~~v~iWd~~~ 97 (380)
T 3iz6_a 70 YSLDWTPEKNWIVSASQDGRLIVWNALT 97 (380)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 5789999998899999999999998654
No 101
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=76.46 E-value=3.1 Score=33.43 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=27.1
Q ss_pred CCCCCCceeecC-CCCcceEE-eecceEEEEeCCCCCe
Q 044375 57 GALGPESIAFDP-NGDGPYTG-VANGRILKWQGDELGW 92 (116)
Q Consensus 57 ~~~GPEsiAfD~-~G~g~YTG-~~DGrIlR~~~~~~~w 92 (116)
...+|.++++|+ +|. +|.+ ..+|+|.|++++....
T Consensus 226 ~~~~P~giavd~~~G~-lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 226 NARGAKTCAVHPQNGK-IYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp ECSSBCCCEECTTTCC-EEECBTTCSEEEEECTTTCCE
T ss_pred ccCCCCEEEEeCCCCe-EEEEECCCCEEEEEECCCCeE
Confidence 457899999999 776 9955 4678999999874333
No 102
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=76.44 E-value=2.2 Score=32.41 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=25.8
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
+--+++|.++|+.+.+|..||.|.-|+...
T Consensus 271 ~V~~~~~Spdg~~lasgs~D~~V~iwd~~~ 300 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLASNDNSIALVKLKD 300 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred CeEeEEECCCCCceEEEcCCCEEEEEECCC
Confidence 345789999999999999999999998654
No 103
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=76.16 E-value=3 Score=31.30 Aligned_cols=29 Identities=7% Similarity=0.242 Sum_probs=25.4
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
--+++|.++|+.++||..||.|.-|+...
T Consensus 67 V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~ 95 (354)
T 2pbi_B 67 VLCMDWCKDKRRIVSSSQDGKVIVWDSFT 95 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 35789999999999999999999998654
No 104
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=76.09 E-value=5.8 Score=30.97 Aligned_cols=43 Identities=23% Similarity=0.115 Sum_probs=30.1
Q ss_pred eccCCCCCCCceeecCCCCcceEEe-ecceEEEEeCCCCCeEEE
Q 044375 53 IQVTGALGPESIAFDPNGDGPYTGV-ANGRILKWQGDELGWTEF 95 (116)
Q Consensus 53 l~~~~~~GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~~~~w~~f 95 (116)
+...+..+|+.+|+|+.++.+|..- ..++|.+++.++...+.+
T Consensus 153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l 196 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 196 (386)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEE
T ss_pred EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEe
Confidence 3344567999999998655688765 467899888776544443
No 105
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=75.92 E-value=2.8 Score=30.01 Aligned_cols=29 Identities=17% Similarity=0.244 Sum_probs=24.2
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDEL 90 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~~ 90 (116)
.-++++|++|. +|.|+.+|.|.++++++.
T Consensus 217 ~~~~~~~~~g~-l~v~t~~~gl~~~~~~g~ 245 (330)
T 3hxj_A 217 VTRPAISEDGT-IYVTSLDGHLYAINPDGT 245 (330)
T ss_dssp CSCCEECTTSC-EEEEETTTEEEEECTTSC
T ss_pred eeceEECCCCe-EEEEcCCCeEEEECCCCC
Confidence 56778999986 999999999999976543
No 106
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=75.88 E-value=2.3 Score=37.16 Aligned_cols=30 Identities=10% Similarity=0.159 Sum_probs=26.7
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDEL 90 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~~ 90 (116)
=.+++|.|||+-+++|..||.|.-|+..+.
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 457999999999999999999999997654
No 107
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=75.82 E-value=2.8 Score=30.17 Aligned_cols=32 Identities=6% Similarity=-0.056 Sum_probs=27.0
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDELG 91 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~ 91 (116)
.--+++|.++|+-+++|..||.|.-|+.+...
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~ 41 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNK 41 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc
Confidence 44678999999989999999999999876543
No 108
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=75.72 E-value=2.5 Score=31.53 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=27.1
Q ss_pred CCCCCceeecCCCCcceEEee---------------cceEEEEeCCC
Q 044375 58 ALGPESIAFDPNGDGPYTGVA---------------NGRILKWQGDE 89 (116)
Q Consensus 58 ~~GPEsiAfD~~G~g~YTG~~---------------DGrIlR~~~~~ 89 (116)
..+|.+++|+++|+.+|++.. ||+|..|+...
T Consensus 344 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 344 FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 357889999999988999887 68999998754
No 109
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=75.46 E-value=2.7 Score=31.05 Aligned_cols=29 Identities=7% Similarity=0.292 Sum_probs=25.1
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
=-+++|.++|+.++||..||.|.-|+...
T Consensus 58 v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~ 86 (340)
T 1got_B 58 IYAMHWGTDSRLLLSASQDGKLIIWDSYT 86 (340)
T ss_dssp EEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 35789999999899999999999998643
No 110
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=75.38 E-value=4.4 Score=29.42 Aligned_cols=28 Identities=18% Similarity=0.350 Sum_probs=24.7
Q ss_pred CceeecCCCCcceEEeecceEEEEeCCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.+++|.++|..+++|..||.|.-|+...
T Consensus 232 ~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 232 SFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 4678999998899999999999999754
No 111
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=75.22 E-value=2.2 Score=30.33 Aligned_cols=30 Identities=20% Similarity=0.276 Sum_probs=25.6
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
..-+++|.++|+.+++|..||.|.-|+-+.
T Consensus 317 ~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 317 PLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 456789999999999999999999997653
No 112
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=74.83 E-value=2.2 Score=31.51 Aligned_cols=28 Identities=25% Similarity=0.464 Sum_probs=24.8
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQG 87 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~ 87 (116)
.-.+++|.++|+.+.+|..||.|.-|+.
T Consensus 215 ~v~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 215 NVNHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred cceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 3467899999998999999999999986
No 113
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=74.83 E-value=2.2 Score=31.78 Aligned_cols=28 Identities=25% Similarity=0.527 Sum_probs=24.5
Q ss_pred CceeecCCCCcceEEeecceEEEEeCCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
-+++|+++|..+.+|..||.|.-|+...
T Consensus 32 ~~v~~s~~g~~la~g~~dg~v~iw~~~~ 59 (447)
T 3dw8_B 32 STVEFNHSGELLATGDKGGRVVIFQQEQ 59 (447)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEEECC
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEEecC
Confidence 4679999999899999999999998654
No 114
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=74.82 E-value=2.3 Score=32.05 Aligned_cols=28 Identities=14% Similarity=0.133 Sum_probs=23.0
Q ss_pred CceeecC-CCCcceEEeecceEEEEeCCC
Q 044375 62 ESIAFDP-NGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 62 EsiAfD~-~G~g~YTG~~DGrIlR~~~~~ 89 (116)
-+++|.| +|..++||..||.|..|+-..
T Consensus 315 ~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 315 TGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 4689987 787789999999999998643
No 115
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=74.68 E-value=2.1 Score=31.14 Aligned_cols=29 Identities=3% Similarity=-0.225 Sum_probs=25.4
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~ 88 (116)
..-+++|.++|+.+++|..||.|.-|+-+
T Consensus 396 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 396 YIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred ceEEEEccCCCceEEEEecCceEEEEeec
Confidence 56789999999889999999999988754
No 116
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=74.62 E-value=3.2 Score=31.88 Aligned_cols=36 Identities=19% Similarity=0.294 Sum_probs=28.9
Q ss_pred CCCceeecC--CCCcceEEeecc----eEEEEeCCCCCeEEEE
Q 044375 60 GPESIAFDP--NGDGPYTGVANG----RILKWQGDELGWTEFA 96 (116)
Q Consensus 60 GPEsiAfD~--~G~g~YTG~~DG----rIlR~~~~~~~w~~fA 96 (116)
.-.+|++|+ .+. +|.|+..| .|+|....+..|+.+.
T Consensus 56 ~v~~i~~dp~~~~~-l~~g~~~g~~g~gl~~s~D~G~tW~~~~ 97 (394)
T 3b7f_A 56 TIHHIVQDPREPER-MLMAARTGHLGPTVFRSDDGGGNWTEAT 97 (394)
T ss_dssp EEEEEEECSSSTTC-EEEEEEC--CCEEEEEESSTTSCCEECS
T ss_pred ceEEEEECCCCCCe-EEEEecCCCCCccEEEeCCCCCCceECC
Confidence 457899998 664 99999999 8999877777898765
No 117
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=74.51 E-value=2.2 Score=31.60 Aligned_cols=30 Identities=13% Similarity=0.165 Sum_probs=26.1
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~ 88 (116)
....+++|+++|+.+++|..||.|..|+..
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~ 86 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTI 86 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECC
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEec
Confidence 345689999999999999999999999754
No 118
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=74.29 E-value=2.8 Score=31.42 Aligned_cols=29 Identities=24% Similarity=0.407 Sum_probs=23.2
Q ss_pred CCCCCceeecCCCCcceEEee-cceEEEEe
Q 044375 58 ALGPESIAFDPNGDGPYTGVA-NGRILKWQ 86 (116)
Q Consensus 58 ~~GPEsiAfD~~G~g~YTG~~-DGrIlR~~ 86 (116)
..||.+++|+++|+.+|++.. +++|..|+
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence 468999999999988998875 67766654
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=74.13 E-value=3.8 Score=29.07 Aligned_cols=32 Identities=9% Similarity=0.203 Sum_probs=27.0
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDELG 91 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~ 91 (116)
.-.+++|.++|+.+++|..||.|.-|+.....
T Consensus 88 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 119 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ 119 (368)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCC
Confidence 45678999999889999999999999876544
No 120
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=74.03 E-value=2.4 Score=29.83 Aligned_cols=28 Identities=11% Similarity=0.047 Sum_probs=24.5
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEe
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQ 86 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~ 86 (116)
....++++.++|+.+++|..||.|.-|+
T Consensus 307 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 307 SSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp SCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 4567889999999899999999998886
No 121
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=73.94 E-value=4.3 Score=29.03 Aligned_cols=34 Identities=12% Similarity=0.106 Sum_probs=27.4
Q ss_pred CCCCceeecCCCCcceEEee-cceEEEEeCCCCCe
Q 044375 59 LGPESIAFDPNGDGPYTGVA-NGRILKWQGDELGW 92 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~-DGrIlR~~~~~~~w 92 (116)
.+|.+++|+++|+.+|.+.. ++.|..|+......
T Consensus 221 ~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 221 NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 68999999999987887764 78899998765433
No 122
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=73.57 E-value=1.8 Score=31.76 Aligned_cols=28 Identities=11% Similarity=0.063 Sum_probs=24.2
Q ss_pred CceeecCCCCcceEEeecceEEEEeCCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
-+++|+++|+.+.||..||.|.-|+...
T Consensus 17 ~~v~~s~~g~~lasgs~D~~v~lwd~~~ 44 (316)
T 3bg1_A 17 HDAQMDYYGTRLATCSSDRSVKIFDVRN 44 (316)
T ss_dssp EEEEECGGGCEEEEEETTTEEEEEEEET
T ss_pred EEeeEcCCCCEEEEEeCCCeEEEEEecC
Confidence 4689999999999999999999887643
No 123
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=73.32 E-value=4.7 Score=30.18 Aligned_cols=32 Identities=9% Similarity=0.080 Sum_probs=25.4
Q ss_pred CCCCCCCceeecCCCCcceEEeecceEEEEeCC
Q 044375 56 TGALGPESIAFDPNGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 56 ~~~~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~ 88 (116)
+....|..++|+++|+.+|++..| .|..|+.+
T Consensus 37 ~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~ 68 (365)
T 1jof_A 37 PQDEPISWMTFDHERKNIYGAAMK-KWSSFAVK 68 (365)
T ss_dssp CTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEE
T ss_pred CCCCCCcEEEECCCCCEEEEEccc-eEEEEEEC
Confidence 444579999999999889998887 77777653
No 124
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=73.27 E-value=2.8 Score=31.81 Aligned_cols=28 Identities=14% Similarity=0.271 Sum_probs=24.8
Q ss_pred CceeecCCCCcceEEeecceEEEEeCCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.+++|.++|+.+++|..||.|.-|+...
T Consensus 131 ~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 131 STVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 4789999999999999999999998654
No 125
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=73.14 E-value=3.8 Score=29.75 Aligned_cols=30 Identities=27% Similarity=0.533 Sum_probs=25.3
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.--+++|.++|..+++|..||.|.-|+..+
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 139 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTG 139 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 345789999999899999999999998544
No 126
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=73.03 E-value=3 Score=29.73 Aligned_cols=29 Identities=10% Similarity=0.093 Sum_probs=24.3
Q ss_pred CCCceeecCCCCcce-EEeecceEEEEeCC
Q 044375 60 GPESIAFDPNGDGPY-TGVANGRILKWQGD 88 (116)
Q Consensus 60 GPEsiAfD~~G~g~Y-TG~~DGrIlR~~~~ 88 (116)
.--+++|.++|+.++ +|..||.|.-|+-.
T Consensus 323 ~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 323 PISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp CEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 345789999998787 89999999999754
No 127
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=72.95 E-value=4.4 Score=30.96 Aligned_cols=31 Identities=10% Similarity=-0.240 Sum_probs=25.6
Q ss_pred CCCCceeecCCCCcceEEee--cceEEEEeCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVA--NGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~--DGrIlR~~~~~ 89 (116)
..|..++|++||+.+|++.. ++.|..|+.+.
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK 140 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTT
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCC
Confidence 47999999999999999874 57888777654
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=72.92 E-value=2.2 Score=31.80 Aligned_cols=30 Identities=13% Similarity=0.177 Sum_probs=25.9
Q ss_pred CCCCceeecCCCCcceEEee-cceEEEEeCC
Q 044375 59 LGPESIAFDPNGDGPYTGVA-NGRILKWQGD 88 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~-DGrIlR~~~~ 88 (116)
..|.+++|+++|+.+|++.. ||.|.-|+.+
T Consensus 401 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 401 NQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp SSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred CCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 47899999999988898876 9999999865
No 129
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=72.80 E-value=2.3 Score=29.66 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=26.3
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCCCCe
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDELGW 92 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w 92 (116)
...+++|.++|+ +++|..||.|.-|+.....+
T Consensus 268 ~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 268 SIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp CEEEEEECTTSC-EEEEETTSCEEEEESCGGGC
T ss_pred eEEEEEEccCCC-EEEEeCCCcEEEEeCCCCce
Confidence 345789999998 99999999999998765443
No 130
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=72.70 E-value=3.8 Score=31.83 Aligned_cols=36 Identities=14% Similarity=0.324 Sum_probs=28.3
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCCCCeEEE
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEF 95 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~f 95 (116)
..-+++|.++|+.+.+|..||.|.-|+.++.....+
T Consensus 510 ~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~ 545 (577)
T 2ymu_A 510 SVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL 545 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEE
T ss_pred CEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEE
Confidence 346789999999999999999999998655433333
No 131
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=72.45 E-value=2.7 Score=31.88 Aligned_cols=28 Identities=18% Similarity=0.375 Sum_probs=24.2
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~ 88 (116)
-.+++|.++|+.+++|..||.|.-|+-.
T Consensus 259 v~~v~~~~~g~~l~s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 259 VYSVVFTRDGQSVVSGSLDRSVKLWNLQ 286 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 4578999999999999999999999764
No 132
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=72.44 E-value=2.7 Score=31.84 Aligned_cols=28 Identities=11% Similarity=-0.009 Sum_probs=25.0
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~ 88 (116)
--+++|.|||+-+.+|..||.|.-|+-+
T Consensus 315 V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 315 ITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 3689999999999999999999999864
No 133
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=72.29 E-value=2.5 Score=31.76 Aligned_cols=28 Identities=18% Similarity=0.354 Sum_probs=24.0
Q ss_pred CCCCceeecCCCCcceEEeecc-eEEEEe
Q 044375 59 LGPESIAFDPNGDGPYTGVANG-RILKWQ 86 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DG-rIlR~~ 86 (116)
.||..|+++++|+.+|.+..+| +|++++
T Consensus 195 ~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 195 LGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp CCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred cccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 4789999999998899988777 888885
No 134
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=72.27 E-value=5 Score=30.76 Aligned_cols=44 Identities=18% Similarity=0.014 Sum_probs=31.4
Q ss_pred eccCCCCCCCceeecCCCCcceEEee--cceEEEEeCCCCCeEEEE
Q 044375 53 IQVTGALGPESIAFDPNGDGPYTGVA--NGRILKWQGDELGWTEFA 96 (116)
Q Consensus 53 l~~~~~~GPEsiAfD~~G~g~YTG~~--DGrIlR~~~~~~~w~~fA 96 (116)
+.......|.++|+|+.++.+|-.-. .++|.|++.++..-+.+.
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 161 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 161 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE
Confidence 33356678999999986555888763 589999988765444443
No 135
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=72.17 E-value=3.5 Score=30.28 Aligned_cols=30 Identities=17% Similarity=0.350 Sum_probs=25.8
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.-.+++|.++|+.+.+|..||.|.-|+...
T Consensus 198 ~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 198 NINTLTASPDGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 345789999999899999999999998754
No 136
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=72.07 E-value=2.7 Score=31.03 Aligned_cols=27 Identities=19% Similarity=0.340 Sum_probs=24.2
Q ss_pred CceeecCCCCcceEEeecceEEEEeCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~ 88 (116)
.+++|.++|+.+++|..||.|.-|+..
T Consensus 111 ~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 111 KGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 478999999999999999999999873
No 137
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=72.01 E-value=3.8 Score=29.67 Aligned_cols=31 Identities=19% Similarity=0.401 Sum_probs=26.4
Q ss_pred CCCCceeecC-CCCcceEEeecceEEEEeCCC
Q 044375 59 LGPESIAFDP-NGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~-~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.+--+++|.+ +|.-+++|..||.|.-|+...
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~ 75 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLEN 75 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCC
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCC
Confidence 3456789999 998899999999999998754
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=71.82 E-value=3.1 Score=34.13 Aligned_cols=28 Identities=11% Similarity=-0.110 Sum_probs=26.1
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQG 87 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~ 87 (116)
.|.+++|++||+.+|++..||.|..|+.
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~ 207 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDL 207 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEEC
Confidence 3889999999999999999999999998
No 139
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=71.77 E-value=6.3 Score=29.20 Aligned_cols=32 Identities=13% Similarity=0.310 Sum_probs=25.8
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCCCCe
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDELGW 92 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w 92 (116)
=.+++|.++|+.+++|..||.|.-|+.....+
T Consensus 64 v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~ 95 (345)
T 3fm0_A 64 VRKVAWSPCGNYLASASFDATTCIWKKNQDDF 95 (345)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEECCC-E
T ss_pred EEEEEECCCCCEEEEEECCCcEEEEEccCCCe
Confidence 35789999999899999999999997654443
No 140
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=71.69 E-value=4 Score=30.22 Aligned_cols=30 Identities=20% Similarity=0.269 Sum_probs=26.2
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.-.+++|.++|+.+++|..||.|.-|+...
T Consensus 208 ~v~~l~~spd~~~l~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 208 PIRSLTFSPDSQLLVTASDDGYIKIYDVQH 237 (321)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEETTT
T ss_pred ceeEEEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 347899999999899999999999998654
No 141
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=71.38 E-value=2.8 Score=31.03 Aligned_cols=25 Identities=16% Similarity=0.304 Sum_probs=22.2
Q ss_pred CceeecCCCCcceEEeecceEEEEe
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQ 86 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~ 86 (116)
.+++|.++|..+.||..||.|.-|+
T Consensus 316 ~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 316 SCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEcCCCCEEEEEcCCccEEecC
Confidence 4689999998899999999998884
No 142
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=71.38 E-value=5.6 Score=27.70 Aligned_cols=30 Identities=20% Similarity=0.219 Sum_probs=25.4
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDEL 90 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~ 90 (116)
...+++|.++|. +++|..||.|.-|+....
T Consensus 227 ~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~~ 256 (313)
T 3odt_A 227 FVYCIKLLPNGD-IVSCGEDRTVRIWSKENG 256 (313)
T ss_dssp CEEEEEECTTSC-EEEEETTSEEEEECTTTC
T ss_pred eEEEEEEecCCC-EEEEecCCEEEEEECCCC
Confidence 456789999996 999999999999987543
No 143
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=71.29 E-value=2.5 Score=35.56 Aligned_cols=30 Identities=7% Similarity=-0.053 Sum_probs=27.5
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~ 88 (116)
..|+.++|++||+.+|++..||.|..|+..
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECC
Confidence 478999999999999999999999999974
No 144
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=71.28 E-value=3.2 Score=29.57 Aligned_cols=34 Identities=26% Similarity=0.254 Sum_probs=27.9
Q ss_pred CCCCceeecCCCC-cceEEeecceEEEEeC-CCCCe
Q 044375 59 LGPESIAFDPNGD-GPYTGVANGRILKWQG-DELGW 92 (116)
Q Consensus 59 ~GPEsiAfD~~G~-g~YTG~~DGrIlR~~~-~~~~w 92 (116)
....+++|.++|. .+++|..||.|..|+. .....
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 92 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF 92 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE
T ss_pred CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce
Confidence 3556889999998 8999999999999987 55443
No 145
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=71.21 E-value=6.3 Score=31.42 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=27.3
Q ss_pred CCCCCCceeecC-CCCcceEE-eecceEEEEeCCCCCe
Q 044375 57 GALGPESIAFDP-NGDGPYTG-VANGRILKWQGDELGW 92 (116)
Q Consensus 57 ~~~GPEsiAfD~-~G~g~YTG-~~DGrIlR~~~~~~~w 92 (116)
...+|.++++|+ +|. +|.. ..++||+|++.++...
T Consensus 224 ~~~~p~giavdp~~g~-lyv~d~~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 224 KGQNCNGAETHPINGE-LYFNSWNAGQVFRYDFTTQET 260 (430)
T ss_dssp ECSSCCCEEECTTTCC-EEEEETTTTEEEEEETTTTEE
T ss_pred cCCCceEEEEeCCCCE-EEEEECCCCEEEEEECCCCcE
Confidence 356899999999 676 8865 4679999999875433
No 146
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=71.18 E-value=7.2 Score=28.63 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=28.1
Q ss_pred CCCCceeecCCC-CcceEEeecceEEEEeCCCCCeE
Q 044375 59 LGPESIAFDPNG-DGPYTGVANGRILKWQGDELGWT 93 (116)
Q Consensus 59 ~GPEsiAfD~~G-~g~YTG~~DGrIlR~~~~~~~w~ 93 (116)
..--+++|.++| +-+++|..||.|.-|+.......
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 109 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT 109 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc
Confidence 345678999998 77999999999999988654443
No 147
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=71.08 E-value=2.8 Score=34.39 Aligned_cols=25 Identities=24% Similarity=0.578 Sum_probs=22.8
Q ss_pred ceeecCCCCcceEEeecceEEEEeC
Q 044375 63 SIAFDPNGDGPYTGVANGRILKWQG 87 (116)
Q Consensus 63 siAfD~~G~g~YTG~~DGrIlR~~~ 87 (116)
+++|.++|+.+++|..||.|.-|+-
T Consensus 667 ~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 667 SLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC
T ss_pred eEEEcCCCCEEEEEcCCCeEEEEec
Confidence 6789999999999999999999974
No 148
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=70.80 E-value=4.2 Score=30.07 Aligned_cols=30 Identities=13% Similarity=0.341 Sum_probs=26.0
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.-.+++|.++|+.+++|..||.|.-|+...
T Consensus 141 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 170 (420)
T 3vl1_A 141 EITKLKFFPSGEALISSSQDMQLKIWSVKD 170 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ccEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 456789999998899999999999998753
No 149
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=70.63 E-value=3.5 Score=32.91 Aligned_cols=40 Identities=15% Similarity=0.040 Sum_probs=31.2
Q ss_pred CCCCCCCceeecC--CCCcceEEeecceEEEEeCCCCCeEEEE
Q 044375 56 TGALGPESIAFDP--NGDGPYTGVANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 56 ~~~~GPEsiAfD~--~G~g~YTG~~DGrIlR~~~~~~~w~~fA 96 (116)
.++..|+.+|+|+ +|. +|..-..++|.+++.++.....+.
T Consensus 134 ~~~~~P~~lavdp~~~g~-Lyv~d~~~~I~~id~~~~~v~~~~ 175 (430)
T 3tc9_A 134 GGFGGAVWLSFDPKNHNH-LYLVGEQHPTRLIDFEKEYVSTVY 175 (430)
T ss_dssp BCCSCCCEEEEETTEEEE-EEEEEBTEEEEEEETTTTEEEEEE
T ss_pred cCCCCCCEEEECCCCCCe-EEEEeCCCcEEEEECCCCEEEEEe
Confidence 3567899999996 464 999988899999998765555554
No 150
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=70.62 E-value=3.7 Score=29.24 Aligned_cols=31 Identities=13% Similarity=0.109 Sum_probs=26.9
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
...-+++|+++|+.+++|..||.|.-|+...
T Consensus 162 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 162 DEVLSADYDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEESCS
T ss_pred CceeEEEECCCCCEEEEecCCCCEEEEECCC
Confidence 4567889999998899999999999998653
No 151
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=70.58 E-value=3.7 Score=30.17 Aligned_cols=31 Identities=6% Similarity=-0.191 Sum_probs=26.6
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDEL 90 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~ 90 (116)
...+++|.++|..+++|..||.|.-|+-...
T Consensus 172 ~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 4678899999998999999999999987543
No 152
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=70.26 E-value=4.9 Score=29.62 Aligned_cols=30 Identities=7% Similarity=0.217 Sum_probs=25.0
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.-.+++|.++|..+.||..||.|.-|+...
T Consensus 155 ~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 155 DVKHVIWHPSEALLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEET
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 345789999998899999999999887543
No 153
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=70.13 E-value=3.9 Score=30.65 Aligned_cols=30 Identities=13% Similarity=0.193 Sum_probs=25.3
Q ss_pred CCCceeecCCCCcceEEeecce-EEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGR-ILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGr-IlR~~~~~ 89 (116)
.-.+++|.++|..+.||..||. |.-|+...
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 3468899999998999999998 88888653
No 154
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=70.04 E-value=2.5 Score=32.47 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=24.4
Q ss_pred CceeecCCCCcceEEeecceEEEEeCCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
-+++|.++|..++||..||.|.-|+...
T Consensus 300 ~~~~~spdg~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 300 NAACFSPDGARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp EECCBCTTSSEEEEEESSSCEEEEESSS
T ss_pred cceeECCCCCeeEEEcCCCEEEEEECCC
Confidence 4678999999999999999999998643
No 155
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=70.02 E-value=3.7 Score=31.05 Aligned_cols=27 Identities=30% Similarity=0.527 Sum_probs=24.3
Q ss_pred ceeecCCCCcceEEeecceEEEEeCCC
Q 044375 63 SIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 63 siAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
+++|.++|+.+++|..||.|.-|+...
T Consensus 128 ~v~~s~dg~~l~s~~~d~~i~iwd~~~ 154 (393)
T 1erj_A 128 SVCFSPDGKFLATGAEDRLIRIWDIEN 154 (393)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 789999999899999999999998754
No 156
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=69.65 E-value=7.4 Score=29.76 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=26.9
Q ss_pred CceeecC-CCCcceEEeecceEEEEeCCCCCeEEEE
Q 044375 62 ESIAFDP-NGDGPYTGVANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 62 EsiAfD~-~G~g~YTG~~DGrIlR~~~~~~~w~~fA 96 (116)
-+++|.+ +|.-++||..||.|.-|+-.+.....+.
T Consensus 168 ~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 203 (435)
T 4e54_B 168 TGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFA 203 (435)
T ss_dssp CEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEE
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEe
Confidence 4689986 6777999999999999987654444443
No 157
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=69.57 E-value=9.9 Score=33.58 Aligned_cols=42 Identities=12% Similarity=0.054 Sum_probs=31.0
Q ss_pred cCCCCCCCceeecCCCCcceEE-eecceEEEEeCCCCCeEEEE
Q 044375 55 VTGALGPESIAFDPNGDGPYTG-VANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 55 ~~~~~GPEsiAfD~~G~g~YTG-~~DGrIlR~~~~~~~w~~fA 96 (116)
..++..|+.||+|..|+.+|.. ...++|.+++.++.....+.
T Consensus 467 ~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~ 509 (791)
T 3m0c_C 467 SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF 509 (791)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE
T ss_pred ecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEE
Confidence 3467899999999888668865 45688988887765544443
No 158
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=69.48 E-value=5.4 Score=28.63 Aligned_cols=32 Identities=9% Similarity=0.151 Sum_probs=26.7
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDELG 91 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~ 91 (116)
...+++|.++|+.+++|..||.|.-|+.....
T Consensus 54 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred cccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 45678999999989999999999999865443
No 159
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=69.27 E-value=3.6 Score=30.23 Aligned_cols=31 Identities=16% Similarity=0.215 Sum_probs=26.3
Q ss_pred CCCCceeecCCCCcc-eEEeecceEEEEeCCC
Q 044375 59 LGPESIAFDPNGDGP-YTGVANGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~-YTG~~DGrIlR~~~~~ 89 (116)
.+|.+++|+++|+.+ +++..||.|..|+...
T Consensus 116 ~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 478999999999878 5788899999998754
No 160
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=69.22 E-value=2.8 Score=34.31 Aligned_cols=27 Identities=15% Similarity=0.278 Sum_probs=23.8
Q ss_pred CCCc-eeecCCCCcceEEeecceEEEEe
Q 044375 60 GPES-IAFDPNGDGPYTGVANGRILKWQ 86 (116)
Q Consensus 60 GPEs-iAfD~~G~g~YTG~~DGrIlR~~ 86 (116)
++-+ ++|.|||+.+++|..||.|.-|+
T Consensus 327 ~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 327 QHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred CeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 4565 79999999999999999999886
No 161
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=69.16 E-value=5 Score=28.71 Aligned_cols=32 Identities=13% Similarity=0.252 Sum_probs=27.2
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDEL 90 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~ 90 (116)
.+-.+++|.++|+.+++|..||.|.-|+....
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~ 97 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 97 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCC
Confidence 45568999999999999999999999987543
No 162
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=69.15 E-value=3.5 Score=30.93 Aligned_cols=26 Identities=15% Similarity=0.415 Sum_probs=22.6
Q ss_pred CCceeecCCCCcceEEeecceEEEEe
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQ 86 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~ 86 (116)
-.+++|.++|+.+.+|..||.|.-|+
T Consensus 329 v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 329 VSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEEECCCCCEEEEEcCCCCEEecC
Confidence 35789999999899999999998874
No 163
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=69.09 E-value=3.9 Score=30.78 Aligned_cols=31 Identities=16% Similarity=0.188 Sum_probs=26.9
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
...-+++|.++|..+++|..||.|.-|+-..
T Consensus 350 ~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 350 TRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp SCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 4567889999999899999999999998754
No 164
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=69.04 E-value=4.1 Score=30.15 Aligned_cols=29 Identities=14% Similarity=0.268 Sum_probs=25.2
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.-+++|.++|..+++|..||.|.-|+...
T Consensus 251 v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 251 VLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 35789999998899999999999998654
No 165
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=68.78 E-value=4.5 Score=30.99 Aligned_cols=29 Identities=10% Similarity=0.232 Sum_probs=25.2
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
-.+++|+++|+.+++|..||.|.-|+...
T Consensus 341 v~~v~~~~~g~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 341 VRGVLFHSGGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp EEEEEECSSSSCEEEEETTTEEEEECCTT
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 35789999999899999999999998743
No 166
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=68.63 E-value=6.1 Score=32.11 Aligned_cols=37 Identities=22% Similarity=0.283 Sum_probs=28.3
Q ss_pred CCCCceeecCCCCcceEEe-ecceEEEEeCCCCCeEEE
Q 044375 59 LGPESIAFDPNGDGPYTGV-ANGRILKWQGDELGWTEF 95 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~~~~w~~f 95 (116)
.=||++++|+.++.+|.+. ..|+|.+|++.+..-++.
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~ 50 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV 50 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE
Confidence 3599999988444599988 799999999875544444
No 167
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=68.60 E-value=9.3 Score=29.23 Aligned_cols=44 Identities=16% Similarity=0.040 Sum_probs=32.4
Q ss_pred eccCCCCCCCceeecCCCCcceEEe-ecceEEEEeCCCCCeEEEE
Q 044375 53 IQVTGALGPESIAFDPNGDGPYTGV-ANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 53 l~~~~~~GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~~~~w~~fA 96 (116)
+...++..|..||+|++++.+|-.- ..++|.+++.++..-..|.
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 204 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV 204 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEe
Confidence 3335677899999998666698774 4689999988765555555
No 168
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=68.32 E-value=5.5 Score=28.41 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=23.5
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
+-++++|++|. +|.|+.+|.|.++++++
T Consensus 257 ~~~~~~~~~g~-l~v~t~~ggl~~~d~~g 284 (330)
T 3hxj_A 257 ESSPVIGNTDT-IYFGSYDGHLYAINPDG 284 (330)
T ss_dssp CSCCEECTTSC-EEEECTTCEEEEECTTS
T ss_pred cccceEcCCCe-EEEecCCCCEEEECCCC
Confidence 34678888886 99999999999999754
No 169
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=68.22 E-value=8 Score=30.44 Aligned_cols=45 Identities=11% Similarity=-0.057 Sum_probs=33.0
Q ss_pred eccCCCCCCCceeecCCCCcceEEe-ecceEEEEeCCCCCeEEEEE
Q 044375 53 IQVTGALGPESIAFDPNGDGPYTGV-ANGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 53 l~~~~~~GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~~~~w~~fA~ 97 (116)
+...++..|..||+|++++.+|-.- ..++|.+++.++.....+..
T Consensus 240 ~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~ 285 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE 285 (400)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEE
T ss_pred EEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEe
Confidence 3335667999999998766699874 45789999887765555554
No 170
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=67.91 E-value=9.7 Score=29.97 Aligned_cols=41 Identities=17% Similarity=0.073 Sum_probs=29.4
Q ss_pred CCCCCCCceeecCCCCcceEEee--cceEEEEeCCCCCeEEEE
Q 044375 56 TGALGPESIAFDPNGDGPYTGVA--NGRILKWQGDELGWTEFA 96 (116)
Q Consensus 56 ~~~~GPEsiAfD~~G~g~YTG~~--DGrIlR~~~~~~~w~~fA 96 (116)
..+..|.+||+|+.++.+|-.-. .++|.|++.++..-..+.
T Consensus 199 ~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 199 ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 45667999999996556887652 379999987765444443
No 171
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=67.78 E-value=5.2 Score=30.69 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=26.6
Q ss_pred ceeecC---CCCcceEEeecceEEEEeCCCCCeEEEE
Q 044375 63 SIAFDP---NGDGPYTGVANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 63 siAfD~---~G~g~YTG~~DGrIlR~~~~~~~w~~fA 96 (116)
++++|+ .+ .+|.|+.+|.|+|....+..|+.+.
T Consensus 119 ~l~~~~~~~~~-~l~~g~~~ggl~~S~DgG~tW~~~~ 154 (394)
T 3b7f_A 119 WLTPGHASEPG-TWYAGTSPQGLFRSTDHGASWEPVA 154 (394)
T ss_dssp EEEECCTTSTT-CEEEEEETTEEEEESSTTSBCEECH
T ss_pred EEEeCCCCCCC-EEEEEecCCcEEEEcCCCCCeEECc
Confidence 478885 45 4999999999999987777898764
No 172
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=67.60 E-value=5.1 Score=30.04 Aligned_cols=29 Identities=3% Similarity=-0.052 Sum_probs=25.0
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
--+++|.++|..+.+|..||.|.-|+-..
T Consensus 243 v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 243 VVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp EEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred EEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 35789999999899999999999998643
No 173
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=67.56 E-value=5.1 Score=29.26 Aligned_cols=30 Identities=17% Similarity=0.326 Sum_probs=25.8
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
..-+++|.++|+.+++|..||.|.-|+-..
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 345789999999999999999999998754
No 174
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=67.47 E-value=4.7 Score=30.55 Aligned_cols=28 Identities=7% Similarity=0.004 Sum_probs=22.7
Q ss_pred CceeecCCCCc-ceEEeecceEEEEeCCC
Q 044375 62 ESIAFDPNGDG-PYTGVANGRILKWQGDE 89 (116)
Q Consensus 62 EsiAfD~~G~g-~YTG~~DGrIlR~~~~~ 89 (116)
-+++|.++|+. ++||..||.|+.|.-+.
T Consensus 303 ~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 303 RDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 57899999865 45888999999998654
No 175
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=67.24 E-value=3 Score=30.50 Aligned_cols=30 Identities=10% Similarity=0.117 Sum_probs=24.5
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
..-+++|.++|+.+++|..||.|.-|+...
T Consensus 207 ~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 207 WVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp SEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 346789999999899999999999887643
No 176
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=66.59 E-value=5.7 Score=29.69 Aligned_cols=30 Identities=13% Similarity=0.106 Sum_probs=26.3
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
...++++.++|..+++|..||.|.-|+...
T Consensus 178 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 178 TIYSVDWSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred ceEEEEECCCCCEEEEEecCCcEEEEeCCC
Confidence 456889999998899999999999999754
No 177
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=65.72 E-value=13 Score=28.81 Aligned_cols=35 Identities=17% Similarity=0.043 Sum_probs=28.3
Q ss_pred CCCceeecCCCCcceEEeecc---eEEEEeCCCCCeEE
Q 044375 60 GPESIAFDPNGDGPYTGVANG---RILKWQGDELGWTE 94 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DG---rIlR~~~~~~~w~~ 94 (116)
..++++|.++|+.++++..|+ +|+.|+.+++....
T Consensus 355 ~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~ 392 (415)
T 2hqs_A 355 LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKAR 392 (415)
T ss_dssp SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEE
T ss_pred CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEE
Confidence 678899999999888888888 89999877654443
No 178
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=65.60 E-value=16 Score=29.93 Aligned_cols=74 Identities=5% Similarity=-0.184 Sum_probs=45.3
Q ss_pred HHHHHHhhhhcccCcCccCCCCCCccccCcccc------------ccC---ceeeccCCCCCCCceeecCCCCcceEEe-
Q 044375 14 VIAIVSVIISINQTNTTLRNLFCAPCIEGSNNN------------LEG---SRIIQVTGALGPESIAFDPNGDGPYTGV- 77 (116)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~f~~~~i~a~N~~------------L~~---ae~l~~~~~~GPEsiAfD~~G~g~YTG~- 77 (116)
++++.-..+|-+.+..- +|..++..++-.|.. +.. ...|..+ ..| .+++++||+-+|.+.
T Consensus 62 ~~~~~~~~~~~~~~~~~-~p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG--~~P-gia~SpDgk~lyVan~ 137 (426)
T 3c75_H 62 AAAALAAGEADEPVILE-APAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG--FLP-HPVAAEDGSFFAQAST 137 (426)
T ss_dssp HHHHHHSSCCCCCCBCC-CCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC--SSC-EEEECTTSSCEEEEEE
T ss_pred hhccccccCCccccccc-cCCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC--CCC-ceEECCCCCEEEEEec
Confidence 33444455666665544 665555544433331 112 2234444 368 999999999999997
Q ss_pred ---------ecceEEEEeCCCCC
Q 044375 78 ---------ANGRILKWQGDELG 91 (116)
Q Consensus 78 ---------~DGrIlR~~~~~~~ 91 (116)
.++.|..|+.....
T Consensus 138 ~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 138 VFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp EEEETTEEEEEEEEEEECTTTCC
T ss_pred cccccccCCCCCEEEEEECCCCc
Confidence 46788888876543
No 179
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=65.51 E-value=15 Score=31.14 Aligned_cols=45 Identities=18% Similarity=0.037 Sum_probs=32.6
Q ss_pred eeccCCCCCCCceeecCCCCcceEEee--cceEEEEeCCCCCeEEEE
Q 044375 52 IIQVTGALGPESIAFDPNGDGPYTGVA--NGRILKWQGDELGWTEFA 96 (116)
Q Consensus 52 ~l~~~~~~GPEsiAfD~~G~g~YTG~~--DGrIlR~~~~~~~w~~fA 96 (116)
.+....+..|.+||+|+.++.+|-.-. .++|.|...++...+.+.
T Consensus 120 ~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~ 166 (619)
T 3s94_A 120 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 166 (619)
T ss_dssp EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEE
Confidence 344466789999999997545887652 489999988776555544
No 180
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=65.04 E-value=6.9 Score=31.72 Aligned_cols=29 Identities=17% Similarity=0.381 Sum_probs=25.4
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
--+++|.++|+-+++|..||.|.-|+...
T Consensus 327 v~~l~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 327 ITALSSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEECCC
Confidence 45789999999999999999999998654
No 181
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=65.03 E-value=8.4 Score=32.99 Aligned_cols=40 Identities=13% Similarity=0.067 Sum_probs=27.5
Q ss_pred CCCCCCceeecCCCCcceEE-eecceEEEEeCCCCCeEEEE
Q 044375 57 GALGPESIAFDPNGDGPYTG-VANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~YTG-~~DGrIlR~~~~~~~w~~fA 96 (116)
++..|+.||+|..++.+|.. ...++|.+++.++.....+.
T Consensus 451 ~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~ 491 (699)
T 1n7d_A 451 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF 491 (699)
T ss_dssp CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEEC
T ss_pred CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEE
Confidence 45689999999765569876 45689999987765444443
No 182
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=64.98 E-value=5.5 Score=29.96 Aligned_cols=28 Identities=11% Similarity=0.275 Sum_probs=24.7
Q ss_pred CceeecCCCCcceEEeecceEEEEeCCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.+++|.++|+.+++|..||.|.-|+...
T Consensus 143 ~~v~~spdg~~l~sgs~dg~v~iwd~~~ 170 (357)
T 4g56_B 143 KTLSVFSDGTQAVSGGKDFSVKVWDLSQ 170 (357)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 5689999999899999999999998654
No 183
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=64.96 E-value=6 Score=30.25 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=24.6
Q ss_pred CceeecCCCCcceEEeecceEEEEeCCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.+++|.++|..+.||..||.|.-|+...
T Consensus 112 ~~~~~~p~~~~l~s~s~Dg~i~vwd~~~ 139 (410)
T 1vyh_C 112 TRVIFHPVFSVMVSASEDATIKVWDYET 139 (410)
T ss_dssp EEEEECSSSSEEEEEESSSCEEEEETTT
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 4789999998899999999999998654
No 184
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=64.88 E-value=6.4 Score=31.05 Aligned_cols=30 Identities=20% Similarity=0.473 Sum_probs=26.6
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~ 88 (116)
...-++++.++|..+++|..||.|.-|+..
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 356788999999999999999999999876
No 185
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=64.74 E-value=5.4 Score=32.34 Aligned_cols=29 Identities=14% Similarity=0.423 Sum_probs=25.4
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
--+++|.++|+-+.||..||.|.-|+-+.
T Consensus 539 V~~v~fspdg~~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 539 VACVSWSPDNVRLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred eeEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 35789999999999999999999998754
No 186
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=64.56 E-value=4.7 Score=30.23 Aligned_cols=30 Identities=23% Similarity=0.168 Sum_probs=26.2
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
...+++|+++|..+++|..||.|.-|+...
T Consensus 216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 216 AVSSICIDEECCVLILGTTRGIIDIWDIRF 245 (437)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEEcCC
Confidence 456789999999899999999999998754
No 187
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=64.52 E-value=7.4 Score=28.47 Aligned_cols=31 Identities=13% Similarity=0.262 Sum_probs=25.6
Q ss_pred CCCCceeecCCCCcce-EEeecceEEEEeCCC
Q 044375 59 LGPESIAFDPNGDGPY-TGVANGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~Y-TG~~DGrIlR~~~~~ 89 (116)
.+|.+++|+++|+.+| ++..||.|..|+...
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~ 63 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTAT 63 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTT
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCC
Confidence 4688999999997674 666899999999754
No 188
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=64.26 E-value=5.1 Score=29.21 Aligned_cols=29 Identities=17% Similarity=0.130 Sum_probs=25.2
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQG 87 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~ 87 (116)
....+++|.++|+.+++|..||.|.-|+.
T Consensus 147 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 147 STILSLDWHPNNVLLAAGCADRKAYVLSA 175 (377)
T ss_dssp SCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred CCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence 34568899999988999999999999985
No 189
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=63.93 E-value=7.6 Score=28.50 Aligned_cols=30 Identities=20% Similarity=0.092 Sum_probs=26.0
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDEL 90 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~~ 90 (116)
..+++|.++|..+++|..||.|.-|+..+.
T Consensus 166 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 195 (383)
T 3ei3_B 166 YCCVDVSVSRQMLATGDSTGRLLLLGLDGH 195 (383)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTSC
T ss_pred eEEEEECCCCCEEEEECCCCCEEEEECCCC
Confidence 568899999999999999999999987543
No 190
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=63.51 E-value=5.6 Score=34.91 Aligned_cols=42 Identities=38% Similarity=0.744 Sum_probs=30.9
Q ss_pred CCCCCCCceeecC-CCCcceEEeec----------------------ceEEEEeCCCC-------CeEEEEEc
Q 044375 56 TGALGPESIAFDP-NGDGPYTGVAN----------------------GRILKWQGDEL-------GWTEFAVT 98 (116)
Q Consensus 56 ~~~~GPEsiAfD~-~G~g~YTG~~D----------------------GrIlR~~~~~~-------~w~~fA~T 98 (116)
....-||++++++ +|+ +|..+.+ |+|+||.+++. .|+.|...
T Consensus 381 T~mdRpEdi~v~p~~g~-vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~ 452 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQ-VYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVA 452 (592)
T ss_dssp CCEECEEEEEECTTTCC-EEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEEC
T ss_pred ccccCccceeEcCCCCE-EEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEc
Confidence 3446799999998 565 9988643 89999986432 28888754
No 191
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=62.81 E-value=7.5 Score=29.01 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=25.8
Q ss_pred CCCceeecC-CCCcceEEeecceEEEEeCCCC
Q 044375 60 GPESIAFDP-NGDGPYTGVANGRILKWQGDEL 90 (116)
Q Consensus 60 GPEsiAfD~-~G~g~YTG~~DGrIlR~~~~~~ 90 (116)
.--+++|.+ +|..+++|..||.|.-|+-...
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 345789999 8888999999999999987543
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=62.71 E-value=9.8 Score=29.63 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=28.9
Q ss_pred eeccCCCCCCCceeecCCCC-cceEEe-ecceEEEEeCCC
Q 044375 52 IIQVTGALGPESIAFDPNGD-GPYTGV-ANGRILKWQGDE 89 (116)
Q Consensus 52 ~l~~~~~~GPEsiAfD~~G~-g~YTG~-~DGrIlR~~~~~ 89 (116)
.|.+++ +|.+++|++||+ -+|++- .++.|.-|+...
T Consensus 313 ~i~~g~--~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 313 QISLGH--DVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred EEECCC--CcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 344443 699999999998 799987 589999998764
No 193
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=62.49 E-value=5.6 Score=29.03 Aligned_cols=30 Identities=13% Similarity=0.116 Sum_probs=24.9
Q ss_pred CCCCceeecCCC----------CcceEEeecceEEEEeCC
Q 044375 59 LGPESIAFDPNG----------DGPYTGVANGRILKWQGD 88 (116)
Q Consensus 59 ~GPEsiAfD~~G----------~g~YTG~~DGrIlR~~~~ 88 (116)
....+++|.++| ..+++|..||.|.-|+-.
T Consensus 355 ~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 355 PGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp CCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred CceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 345688999998 579999999999999754
No 194
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=62.46 E-value=6.4 Score=28.81 Aligned_cols=30 Identities=13% Similarity=0.173 Sum_probs=25.7
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
..-+++|.++|..+++|..||.|.-|+...
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~ 98 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNE 98 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSS
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeeccc
Confidence 345789999998899999999999998754
No 195
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=62.22 E-value=5.4 Score=29.90 Aligned_cols=29 Identities=28% Similarity=0.286 Sum_probs=24.9
Q ss_pred CCCceeecC-CCCcceEEeecceEEEEeCC
Q 044375 60 GPESIAFDP-NGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 60 GPEsiAfD~-~G~g~YTG~~DGrIlR~~~~ 88 (116)
.--+++|.+ +|..++||..||.|.-|+..
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~ 94 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQGVIKIWNLK 94 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETTSEEEEEEHH
T ss_pred ceEEEEECCCCCCEEEEecCCceEEEeECc
Confidence 456789999 99889999999999999753
No 196
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=61.25 E-value=6.9 Score=30.26 Aligned_cols=31 Identities=23% Similarity=0.305 Sum_probs=26.6
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
....+++|.++|+.+.+|..||.|.-|+...
T Consensus 489 ~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 519 (615)
T 1pgu_A 489 AKPSYISISPSETYIAAGDVMGKILLYDLQS 519 (615)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CceEEEEECCCCCEEEEcCCCCeEEEeeCCC
Confidence 3456789999999999999999999998753
No 197
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=60.41 E-value=12 Score=25.31 Aligned_cols=33 Identities=12% Similarity=0.066 Sum_probs=25.5
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC-CCeE
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE-LGWT 93 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~-~~w~ 93 (116)
...+++|.++|+.++++ .||.|..|+.++ ....
T Consensus 43 ~v~~~~~spdg~~l~~~-~~~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLN-SEGLLYRLSLAGDPSPE 76 (297)
T ss_dssp CCEEEEECTTSSEEEEE-ETTEEEEEESSSCCSCE
T ss_pred ceEeeEECCCCCEEEEE-cCCeEEEEeCCCCCCce
Confidence 56789999999866665 599999998766 4433
No 198
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=60.22 E-value=7.2 Score=29.86 Aligned_cols=30 Identities=10% Similarity=0.117 Sum_probs=25.9
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~ 88 (116)
..+.+++|+++|..+++|..||.|..|+-.
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADKFGDVYSIDIN 179 (450)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEecC
Confidence 356789999999989999999999999753
No 199
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=60.13 E-value=9.4 Score=27.91 Aligned_cols=31 Identities=13% Similarity=0.215 Sum_probs=26.0
Q ss_pred CCCCceeecC-CCCcceEEeecceEEEEeCCC
Q 044375 59 LGPESIAFDP-NGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~-~G~g~YTG~~DGrIlR~~~~~ 89 (116)
...-+++|.+ +|..+++|..||.|.-|+...
T Consensus 263 ~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 263 KGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp SCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred CceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 3456889998 888899999999999998654
No 200
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=59.99 E-value=19 Score=30.59 Aligned_cols=44 Identities=23% Similarity=0.081 Sum_probs=30.6
Q ss_pred eeeccCCCCCCCceeecCCCCcceEEee-cceEEEEeCCCCCeEE
Q 044375 51 RIIQVTGALGPESIAFDPNGDGPYTGVA-NGRILKWQGDELGWTE 94 (116)
Q Consensus 51 e~l~~~~~~GPEsiAfD~~G~g~YTG~~-DGrIlR~~~~~~~w~~ 94 (116)
+.+...+...|+.+|+|..++.+|..-. .++|.+.+.++..-+.
T Consensus 72 ~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 72 EHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred EEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 3343445568999999987666987654 5789998877654333
No 201
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=59.68 E-value=7.4 Score=29.42 Aligned_cols=31 Identities=13% Similarity=0.110 Sum_probs=26.4
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
..-.+++++++|..+++|..||.|.-|+...
T Consensus 311 ~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 341 (464)
T 3v7d_B 311 DRIYSTIYDHERKRCISASMDTTIRIWDLEN 341 (464)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 3456789999999899999999999998754
No 202
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=59.65 E-value=12 Score=31.66 Aligned_cols=46 Identities=17% Similarity=0.044 Sum_probs=33.7
Q ss_pred eccCCCCCCCceeecCCCCcceEE-eecceEEEEeCCCCCeEEEEEc
Q 044375 53 IQVTGALGPESIAFDPNGDGPYTG-VANGRILKWQGDELGWTEFAVT 98 (116)
Q Consensus 53 l~~~~~~GPEsiAfD~~G~g~YTG-~~DGrIlR~~~~~~~w~~fA~T 98 (116)
+++.++..|-.++||+.++.+|-. ...++|.|+..++..++.+..+
T Consensus 343 ~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~ 389 (619)
T 3s94_A 343 LQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTA 389 (619)
T ss_dssp CCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred EeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEEC
Confidence 344556778899999854458855 5689999999988777766543
No 203
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=59.40 E-value=11 Score=28.23 Aligned_cols=30 Identities=17% Similarity=0.258 Sum_probs=25.7
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDEL 90 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~~ 90 (116)
-.+++|.++|.-+++|..||.|.-|+....
T Consensus 137 v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~ 166 (401)
T 4aez_A 137 VASVKWSHDGSFLSVGLGNGLVDIYDVESQ 166 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EEEEEECCCCCEEEEECCCCeEEEEECcCC
Confidence 457899999988999999999999987543
No 204
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=59.39 E-value=10 Score=30.16 Aligned_cols=32 Identities=9% Similarity=-0.023 Sum_probs=27.0
Q ss_pred CceeecCCCCcceEEeecc--eEEEEeCCCCCeE
Q 044375 62 ESIAFDPNGDGPYTGVANG--RILKWQGDELGWT 93 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DG--rIlR~~~~~~~w~ 93 (116)
.+++|.+||+.+|++..|| +|++|+.++....
T Consensus 198 ~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 198 SSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred ccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 5789999999999888899 9999998765544
No 205
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=58.56 E-value=6.5 Score=34.37 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=26.3
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
....+++|+++|+-+.+|..||.|.-|+..+
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~ 48 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQ 48 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTT
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 3567899999999899999999999997653
No 206
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=57.65 E-value=19 Score=31.82 Aligned_cols=42 Identities=17% Similarity=0.082 Sum_probs=31.0
Q ss_pred CCCCCCCceeecCCCCcceEEee-c-ceEEEEeCCCCCeEEEEE
Q 044375 56 TGALGPESIAFDPNGDGPYTGVA-N-GRILKWQGDELGWTEFAV 97 (116)
Q Consensus 56 ~~~~GPEsiAfD~~G~g~YTG~~-D-GrIlR~~~~~~~w~~fA~ 97 (116)
..+..|.+||+|+.++.+|-.-. + ++|.|+..++.....+..
T Consensus 511 ~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~ 554 (791)
T 3m0c_C 511 ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 554 (791)
T ss_dssp CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC
T ss_pred CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe
Confidence 45678999999997556987653 2 799999887765555544
No 207
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=57.49 E-value=9.8 Score=32.00 Aligned_cols=33 Identities=12% Similarity=0.023 Sum_probs=26.0
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCCCCeE
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDELGWT 93 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~ 93 (116)
--+++|.++|..++||..||.|.-|+..+..+.
T Consensus 12 V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~ 44 (753)
T 3jro_A 12 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK 44 (753)
T ss_dssp EEEECCCSSSCCEEEEETTTEEEEEEEETTEEE
T ss_pred eEEEEECCCCCeEEEEECCCcEEEEecCCCCCc
Confidence 346789999988999999999999976543333
No 208
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=56.50 E-value=9.5 Score=27.04 Aligned_cols=29 Identities=17% Similarity=0.181 Sum_probs=24.7
Q ss_pred CCCCceeecC---CCCcceEEeecceEEEEeC
Q 044375 59 LGPESIAFDP---NGDGPYTGVANGRILKWQG 87 (116)
Q Consensus 59 ~GPEsiAfD~---~G~g~YTG~~DGrIlR~~~ 87 (116)
....+++|.+ +|..+++|..||.|.-|+.
T Consensus 210 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 210 NGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp SCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred CceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 3567889998 8888999999999998864
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=56.35 E-value=17 Score=28.28 Aligned_cols=31 Identities=10% Similarity=-0.325 Sum_probs=25.4
Q ss_pred CCCCceeecCCCCcceEEee--cceEEEEeCCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVA--NGRILKWQGDEL 90 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~--DGrIlR~~~~~~ 90 (116)
..|+.+++++||+.+|.+.. ++.|..++ ...
T Consensus 125 ~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~ 157 (373)
T 2mad_H 125 PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGG 157 (373)
T ss_pred CCccceEECCCCCEEEEEecCCCCeEEEEE-CCC
Confidence 46999999999999999874 57788888 543
No 210
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=56.19 E-value=14 Score=28.53 Aligned_cols=29 Identities=21% Similarity=0.379 Sum_probs=25.3
Q ss_pred CCceeecCC-CCcceEEeecceEEEEeCCC
Q 044375 61 PESIAFDPN-GDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 61 PEsiAfD~~-G~g~YTG~~DGrIlR~~~~~ 89 (116)
-.+++|.++ |+.+++|..||.|.-|+...
T Consensus 209 v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 238 (615)
T 1pgu_A 209 VRDVEFSPDSGEFVITVGSDRKISCFDGKS 238 (615)
T ss_dssp EEEEEECSTTCCEEEEEETTCCEEEEETTT
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence 457899999 98899999999999998654
No 211
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=54.86 E-value=9.9 Score=30.20 Aligned_cols=34 Identities=15% Similarity=-0.128 Sum_probs=27.0
Q ss_pred CceeecCCCCcceEEeec----ceEEEEeCCCCCeEEE
Q 044375 62 ESIAFDPNGDGPYTGVAN----GRILKWQGDELGWTEF 95 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~D----GrIlR~~~~~~~w~~f 95 (116)
-+++|++||+.++++..| +.|+.|+.++..+..+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l 190 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF 190 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe
Confidence 688999999989988888 8899998655455443
No 212
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=54.62 E-value=22 Score=30.37 Aligned_cols=42 Identities=12% Similarity=-0.072 Sum_probs=30.7
Q ss_pred CCCCCCCceeecCCCCcceEEe-ecceEEEEeCCCCCeEEEEE
Q 044375 56 TGALGPESIAFDPNGDGPYTGV-ANGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 56 ~~~~GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~~~~w~~fA~ 97 (116)
.++..|..||+|++++.+|..- ..++|.+++.++.....+..
T Consensus 537 ~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~ 579 (699)
T 1n7d_A 537 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE 579 (699)
T ss_dssp SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECC
T ss_pred CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEe
Confidence 4567899999998765688775 45689999887655555543
No 213
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=53.50 E-value=11 Score=32.88 Aligned_cols=31 Identities=26% Similarity=0.247 Sum_probs=26.6
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDELG 91 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~ 91 (116)
-.+++|+++|..+++|..||.|.-|+.....
T Consensus 101 V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~ 131 (902)
T 2oaj_A 101 ITSIDTDASLDWMLIGLQNGSMIVYDIDRDQ 131 (902)
T ss_dssp EEEEECCTTCSEEEEEETTSCEEEEETTTTE
T ss_pred EEEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 3578999999999999999999999876543
No 214
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=53.37 E-value=17 Score=31.82 Aligned_cols=39 Identities=18% Similarity=0.229 Sum_probs=30.3
Q ss_pred CCCCCceeecCCCCcceEEeecc-------------eEEEEeCCCCCeEEEEE
Q 044375 58 ALGPESIAFDPNGDGPYTGVANG-------------RILKWQGDELGWTEFAV 97 (116)
Q Consensus 58 ~~GPEsiAfD~~G~g~YTG~~DG-------------rIlR~~~~~~~w~~fA~ 97 (116)
+.+|.+|+||++|. +|-++-.+ .++++.++...-..|+.
T Consensus 475 fnsPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~ 526 (592)
T 4a9v_A 475 FNSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV 526 (592)
T ss_dssp CCCEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEE
T ss_pred cCCCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEe
Confidence 57899999999996 99865332 89999886666777774
No 215
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=53.20 E-value=24 Score=23.79 Aligned_cols=34 Identities=15% Similarity=-0.104 Sum_probs=25.5
Q ss_pred CCceeecCCCCcceEEeec-----------ceEEEEeCCCCCeEE
Q 044375 61 PESIAFDPNGDGPYTGVAN-----------GRILKWQGDELGWTE 94 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~D-----------GrIlR~~~~~~~w~~ 94 (116)
..+++|+++|+.++++..| ++|..|+..+.....
T Consensus 219 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 263 (297)
T 2ojh_A 219 DWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET 263 (297)
T ss_dssp EEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE
T ss_pred cCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCcee
Confidence 3457899999888888877 679999876654433
No 216
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=52.53 E-value=8.5 Score=31.66 Aligned_cols=30 Identities=13% Similarity=0.109 Sum_probs=25.5
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.--+++|.++|..+.+|..||.|.-|+...
T Consensus 399 ~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 399 TITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred ceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 346889999999899999999999887644
No 217
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=51.77 E-value=22 Score=27.33 Aligned_cols=41 Identities=2% Similarity=-0.062 Sum_probs=30.5
Q ss_pred ceeeccCCCCCCCceeecCCCCcceEEee---cceEEEEeCCCCC
Q 044375 50 SRIIQVTGALGPESIAFDPNGDGPYTGVA---NGRILKWQGDELG 91 (116)
Q Consensus 50 ae~l~~~~~~GPEsiAfD~~G~g~YTG~~---DGrIlR~~~~~~~ 91 (116)
.+.++.+....|+-++|+++|. +|.+.. +++|.+++.....
T Consensus 12 v~~~p~~~~~f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~ 55 (266)
T 2iwa_A 12 LNEFPHDPYAFTQGLVYAENDT-LFESTGLYGRSSVRQVALQTGK 55 (266)
T ss_dssp EEEEECCTTCCEEEEEECSTTE-EEEEECSTTTCEEEEEETTTCC
T ss_pred EEEEECCCCCCcccEEEeCCCe-EEEECCCCCCCEEEEEECCCCC
Confidence 3446666555688999999886 999875 5789998876543
No 218
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=51.62 E-value=12 Score=27.30 Aligned_cols=31 Identities=10% Similarity=-0.250 Sum_probs=25.1
Q ss_pred CCceeecC--CCCcceEEeecceEEEEeCCCCC
Q 044375 61 PESIAFDP--NGDGPYTGVANGRILKWQGDELG 91 (116)
Q Consensus 61 PEsiAfD~--~G~g~YTG~~DGrIlR~~~~~~~ 91 (116)
-.++++.+ +|+.+.+|..||.|.-|+.....
T Consensus 128 v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~ 160 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS 160 (343)
T ss_dssp EEEEECCC---CCEEEEEETTCCEEEEESSSSC
T ss_pred EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc
Confidence 45789999 99889999999999999876543
No 219
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=51.40 E-value=11 Score=30.88 Aligned_cols=31 Identities=10% Similarity=0.132 Sum_probs=26.6
Q ss_pred CCCCceeecC----CCCcceEEee-cceEEEEeCCC
Q 044375 59 LGPESIAFDP----NGDGPYTGVA-NGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~----~G~g~YTG~~-DGrIlR~~~~~ 89 (116)
.+|.+++|++ +|+-+|++.. |+.|.-|+...
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc
Confidence 5899999999 9998999985 89998887643
No 220
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=51.05 E-value=18 Score=30.45 Aligned_cols=34 Identities=15% Similarity=0.307 Sum_probs=28.5
Q ss_pred ceeecCCCCcceEEeecceEEEEeCCCCCeEEEEE
Q 044375 63 SIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 63 siAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA~ 97 (116)
+++.|++|. ++.|+.+|-|.+++.....+..|..
T Consensus 361 ~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~ 394 (795)
T 4a2l_A 361 CIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTL 394 (795)
T ss_dssp EEEECTTSC-EEEEESSSCEEEECTTTCCEEEECC
T ss_pred EEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEec
Confidence 567899997 9999999999999987767777653
No 221
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=51.05 E-value=21 Score=28.96 Aligned_cols=34 Identities=6% Similarity=-0.077 Sum_probs=27.9
Q ss_pred CCCceeecCCCCcceEEee-cc-----eEEEEeCCCCCeE
Q 044375 60 GPESIAFDPNGDGPYTGVA-NG-----RILKWQGDELGWT 93 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~-DG-----rIlR~~~~~~~w~ 93 (116)
.+-+++|.+||+.++++.. || .|+.|+.++....
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~ 77 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR 77 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCcee
Confidence 4678899999998999888 98 8999998665544
No 222
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=50.88 E-value=39 Score=24.77 Aligned_cols=38 Identities=11% Similarity=0.013 Sum_probs=28.2
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCCCCeEEEEEcCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAVTTS 100 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA~Ts~ 100 (116)
.+|.+++++++|+ +|. ..+++|..|++++ -..|.+..+
T Consensus 37 ~~~~~~~~~pdG~-ilv-s~~~~V~~~d~~G--~~~W~~~~~ 74 (276)
T 3no2_A 37 WECNSVAATKAGE-ILF-SYSKGAKMITRDG--RELWNIAAP 74 (276)
T ss_dssp CCCCEEEECTTSC-EEE-ECBSEEEEECTTS--CEEEEEECC
T ss_pred CCCcCeEECCCCC-EEE-eCCCCEEEECCCC--CEEEEEcCC
Confidence 5799999999998 666 6689999999843 344555443
No 223
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=50.78 E-value=20 Score=27.41 Aligned_cols=32 Identities=13% Similarity=0.049 Sum_probs=26.5
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDELG 91 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~ 91 (116)
....+++|. +|+.+++|..||.|.-|+-....
T Consensus 242 ~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 242 HFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp SCEEEEEEC-STTEEEEEESSSEEEEEETTTCC
T ss_pred CceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc
Confidence 345788999 99889999999999999976533
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=50.63 E-value=17 Score=30.78 Aligned_cols=18 Identities=17% Similarity=0.409 Sum_probs=17.3
Q ss_pred CCCceeecCCCCcceEEe
Q 044375 60 GPESIAFDPNGDGPYTGV 77 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~ 77 (116)
||..|++++||+.+|...
T Consensus 382 gPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 382 APQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCCEEECTTSSEEEEEC
T ss_pred CCCEEEEcCCCCEEEEEc
Confidence 899999999999999998
No 225
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=50.46 E-value=13 Score=30.34 Aligned_cols=29 Identities=17% Similarity=0.401 Sum_probs=25.2
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
-.+++|.++|+.+.||..||.|.-|+...
T Consensus 433 v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~ 461 (694)
T 3dm0_A 433 VEDVVLSSDGQFALSGSWDGELRLWDLAA 461 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 45789999999899999999999998653
No 226
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=50.29 E-value=14 Score=29.56 Aligned_cols=31 Identities=6% Similarity=-0.134 Sum_probs=25.0
Q ss_pred CCCCCCceeecCCCCcceEEee------------------cceEEEEeCC
Q 044375 57 GALGPESIAFDPNGDGPYTGVA------------------NGRILKWQGD 88 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~YTG~~------------------DGrIlR~~~~ 88 (116)
....|.|+++|++|+ .|.+.. .|+|+|+++.
T Consensus 163 ~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 163 LLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp TCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred CCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 456899999999996 777642 4899999874
No 227
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=50.28 E-value=58 Score=26.36 Aligned_cols=31 Identities=10% Similarity=0.023 Sum_probs=24.5
Q ss_pred CCCCceeecCCCCcceEEe----------ecceEEEEeCCCC
Q 044375 59 LGPESIAFDPNGDGPYTGV----------ANGRILKWQGDEL 90 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~----------~DGrIlR~~~~~~ 90 (116)
.+|. +++++||+-+|.+. .++.|-.|+....
T Consensus 79 ~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 79 FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL 119 (386)
T ss_dssp SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 5785 99999999999986 3677888876543
No 228
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=50.11 E-value=16 Score=30.66 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=27.7
Q ss_pred CceeecCCCCcceEEeecceEEEEeCCCCCeEEEE
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA 96 (116)
-+++.|++|+ ++.|+.++-|.+++++...++.|.
T Consensus 498 ~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 498 RSIAQDSEGR-FWIGTFGGGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp EEEEECTTCC-EEEEESSSCEEEECTTCCEEEEEC
T ss_pred EEEEEcCCCC-EEEEEcCCCEEEEeCCCCeEEEcc
Confidence 4678999997 999999777999998776677654
No 229
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=50.09 E-value=67 Score=23.23 Aligned_cols=29 Identities=10% Similarity=0.134 Sum_probs=24.4
Q ss_pred ceeecCCCCcceEEeecceEEEEeCCCCC
Q 044375 63 SIAFDPNGDGPYTGVANGRILKWQGDELG 91 (116)
Q Consensus 63 siAfD~~G~g~YTG~~DGrIlR~~~~~~~ 91 (116)
+.++.+||+.+|.+..|+.|++|+.++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLE 113 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 56899999889999999999999876543
No 230
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=49.20 E-value=15 Score=29.41 Aligned_cols=36 Identities=11% Similarity=0.064 Sum_probs=25.8
Q ss_pred CCCCceeecCCCCcceEEeecc--eEEEEeCCCCCeEE
Q 044375 59 LGPESIAFDPNGDGPYTGVANG--RILKWQGDELGWTE 94 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DG--rIlR~~~~~~~w~~ 94 (116)
..+.+++|.+||+-.|++..|| +|++|+.++..++.
T Consensus 242 ~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~ 279 (662)
T 3azo_A 242 EAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQ 279 (662)
T ss_dssp BCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEE
T ss_pred ceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceee
Confidence 3456788999998556666778 89999875544543
No 231
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=48.65 E-value=16 Score=26.90 Aligned_cols=38 Identities=11% Similarity=-0.051 Sum_probs=29.1
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCCCCeEEEEEcC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAVTT 99 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA~Ts 99 (116)
.|..++++++|+.+++...||+|..|+.++. ..|.+..
T Consensus 126 ~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~--~~w~~~~ 163 (276)
T 3no2_A 126 QFRQINKNKKGNYLVPLFATSEVREIAPNGQ--LLNSVKL 163 (276)
T ss_dssp SCSCCEECTTSCEEEEETTTTEEEEECTTSC--EEEEEEC
T ss_pred cccCceECCCCCEEEEecCCCEEEEECCCCC--EEEEEEC
Confidence 4667889999998888889999999998743 3444443
No 232
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=48.29 E-value=17 Score=29.54 Aligned_cols=30 Identities=23% Similarity=0.397 Sum_probs=26.1
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
..-+++|.++|.-+.+|..||.|.-|+...
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~ 44 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYET 44 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 456889999999899999999999998654
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=47.50 E-value=17 Score=28.91 Aligned_cols=36 Identities=6% Similarity=0.038 Sum_probs=27.3
Q ss_pred CCCceeecCCCCcceEEee--cceEEEEeCCCCCeEEEEE
Q 044375 60 GPESIAFDPNGDGPYTGVA--NGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~--DGrIlR~~~~~~~w~~fA~ 97 (116)
+|..|+|++||+-+|.... ++.|--|+... |+.-+.
T Consensus 315 ~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t--~kvv~~ 352 (368)
T 1mda_H 315 DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS--DQDQSS 352 (368)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEESSS--CEEEEE
T ss_pred CcceEEECCCCCEEEEEccCCCCeEEEEECCC--CcEEEE
Confidence 7999999999975566655 89999998763 554443
No 234
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=47.39 E-value=14 Score=32.87 Aligned_cols=31 Identities=32% Similarity=0.724 Sum_probs=26.9
Q ss_pred CCCCCCceeecCCCCcceEEe-ecceEEEEeCC
Q 044375 57 GALGPESIAFDPNGDGPYTGV-ANGRILKWQGD 88 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~ 88 (116)
...||=..+||++|. .||.+ -|..|+||+-+
T Consensus 376 ~GlGPlHt~Fd~~G~-aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 376 LGLGPLHTTFDGRGN-AYTTLFIDSQVVKWNME 407 (638)
T ss_dssp CCSCEEEEEECSSSE-EEEEETTTTEEEEEEHH
T ss_pred CCCcccEEEECCCCc-eEeeeeecceEEEEecc
Confidence 347999999999995 99998 89999999754
No 235
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=46.20 E-value=19 Score=29.42 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=27.6
Q ss_pred eccCCCCCCCceeecCCCCcceEEeecceEEEEeCC
Q 044375 53 IQVTGALGPESIAFDPNGDGPYTGVANGRILKWQGD 88 (116)
Q Consensus 53 l~~~~~~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~ 88 (116)
+.++ ..||.+++|+..+-+|.|-.|--|+|++.+
T Consensus 176 f~lg--sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 176 FKMN--SQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EECS--SCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred ecCC--CCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 4444 479999999865569999999999999954
No 236
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=43.99 E-value=17 Score=29.53 Aligned_cols=31 Identities=13% Similarity=-0.033 Sum_probs=26.2
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDELG 91 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~ 91 (116)
-.+++|.++|+.+.+|..||.|.-|+.....
T Consensus 58 v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~ 88 (814)
T 3mkq_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGE 88 (814)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 4578999999889999999999999875443
No 237
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=43.86 E-value=30 Score=28.04 Aligned_cols=32 Identities=9% Similarity=-0.093 Sum_probs=25.8
Q ss_pred CCCCceeecCCCCcceEEee--cceEEEEeCCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVA--NGRILKWQGDEL 90 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~--DGrIlR~~~~~~ 90 (116)
..|..++|++||+.+|.+-. ++.|.-|+....
T Consensus 137 ~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~ 170 (386)
T 3sjl_D 137 TYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 170 (386)
T ss_dssp CCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred CCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC
Confidence 47999999999999999864 678877776543
No 238
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=43.32 E-value=18 Score=29.61 Aligned_cols=37 Identities=11% Similarity=0.130 Sum_probs=29.8
Q ss_pred eeeccCCCCCCCceeecCCCC-cceEEe-ecceEEEEeCCC
Q 044375 51 RIIQVTGALGPESIAFDPNGD-GPYTGV-ANGRILKWQGDE 89 (116)
Q Consensus 51 e~l~~~~~~GPEsiAfD~~G~-g~YTG~-~DGrIlR~~~~~ 89 (116)
..|.++. +|.+++|++||+ -+|+.- .+|.|.-|+...
T Consensus 364 ~~I~vg~--~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 364 NKIELGH--EIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EEEEEEE--EECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred EEEECCC--CcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 3455443 699999999998 899998 599999998764
No 239
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=43.07 E-value=24 Score=30.61 Aligned_cols=30 Identities=17% Similarity=0.198 Sum_probs=25.8
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.--+++|.++|+.+.+|..||.|.-|+...
T Consensus 659 ~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence 345789999999899999999999998754
No 240
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=42.87 E-value=19 Score=31.07 Aligned_cols=41 Identities=34% Similarity=0.700 Sum_probs=30.1
Q ss_pred CCCCCCceeecC-CCCcceEEee----------------------cceEEEEeCCCC-------CeEEEEEc
Q 044375 57 GALGPESIAFDP-NGDGPYTGVA----------------------NGRILKWQGDEL-------GWTEFAVT 98 (116)
Q Consensus 57 ~~~GPEsiAfD~-~G~g~YTG~~----------------------DGrIlR~~~~~~-------~w~~fA~T 98 (116)
....||++++++ +|+ +|..+. .|.|+||.+++. .|+.|...
T Consensus 382 ~f~RpEgi~~~p~~g~-vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~ 452 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQ-VYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVA 452 (592)
T ss_dssp CEECEEEEEECTTTCC-EEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEEC
T ss_pred EEeccceeEEcCCCCE-EEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEec
Confidence 457899999997 565 997765 389999976422 37777654
No 241
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=42.17 E-value=25 Score=29.51 Aligned_cols=33 Identities=15% Similarity=0.410 Sum_probs=26.2
Q ss_pred CceeecCC--CCcceEEeecceEEEEeCCCCCeEE
Q 044375 62 ESIAFDPN--GDGPYTGVANGRILKWQGDELGWTE 94 (116)
Q Consensus 62 EsiAfD~~--G~g~YTG~~DGrIlR~~~~~~~w~~ 94 (116)
-+++|.++ |..+++|..||.|.-|+.....|..
T Consensus 57 ~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~ 91 (753)
T 3jro_A 57 WRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQ 91 (753)
T ss_dssp EEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEE
T ss_pred EEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccc
Confidence 46788776 8889999999999999876654443
No 242
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=41.17 E-value=23 Score=30.24 Aligned_cols=33 Identities=21% Similarity=0.470 Sum_probs=27.3
Q ss_pred CceeecCC--CCcceEEeecceEEEEeCCCCCeEEE
Q 044375 62 ESIAFDPN--GDGPYTGVANGRILKWQGDELGWTEF 95 (116)
Q Consensus 62 EsiAfD~~--G~g~YTG~~DGrIlR~~~~~~~w~~f 95 (116)
-+|+|++. +. +|.|+..|.|+|....+..|+..
T Consensus 26 ~~i~~~p~~~~~-~~~~~~~ggv~rS~D~G~tW~~i 60 (737)
T 2cn3_A 26 PGIVFNETEKDL-IYARAAIGGAYRWDPSTETWIPL 60 (737)
T ss_dssp CEEEECSSSTTC-EEEECSSSCEEEEETTTTEEEEC
T ss_pred eEEEECCCCCCE-EEEEecCCcEEEeCCCCCCEEEC
Confidence 36899875 54 99999999999998777788873
No 243
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=41.12 E-value=22 Score=30.88 Aligned_cols=29 Identities=10% Similarity=0.156 Sum_probs=25.0
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
--+++|.++|+.+++|..||.|.-|+...
T Consensus 618 v~~~~~s~~~~~l~s~~~d~~i~vw~~~~ 646 (1249)
T 3sfz_A 618 VYHACFSQDGQRIASCGADKTLQVFKAET 646 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 34679999999999999999999998754
No 244
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=40.35 E-value=21 Score=26.85 Aligned_cols=30 Identities=13% Similarity=0.253 Sum_probs=25.0
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.+-.+++|.++| -+++|..||.|.-|+...
T Consensus 163 ~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 163 GGVWALKYAHGG-ILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp SCEEEEEECSTT-EEEEEETTSCEEEEETTT
T ss_pred cCEEEEEEcCCC-EEEEEeCCCCEEEEECCC
Confidence 455678898888 599999999999998754
No 245
>3sui_B Transient receptor potential cation channel subfa member 1; calmodulin, calcium-calmodulin, TRPV1, TRPV1 C-terminus, CAL complex, thermosensor; 1.95A {Rattus norvegicus}
Probab=39.42 E-value=12 Score=21.62 Aligned_cols=33 Identities=27% Similarity=0.531 Sum_probs=19.2
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCCCCeEEEEEcCCCc
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAVTTSQR 102 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA~Ts~~r 102 (116)
|||.+-- -+--....||| .++.|++|+-..--|
T Consensus 1 gpe~ikr-----~lsfslrsgrv-----sgrnwknf~lvpllr 33 (37)
T 3sui_B 1 GPEGVKR-----TLSFSLRSGRV-----SGRNWKNFALVPLLR 33 (37)
T ss_pred Cchhhcc-----ccceEeecccc-----ccccccccchhhhhh
Confidence 6675531 24445556654 355799998665443
No 246
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=39.28 E-value=57 Score=24.37 Aligned_cols=47 Identities=11% Similarity=0.090 Sum_probs=31.2
Q ss_pred CceeeccCCCCCCCceeecCCCCcceEEeecceEEEEeCCCCCeEEEE
Q 044375 49 GSRIIQVTGALGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 49 ~ae~l~~~~~~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA 96 (116)
..+.+..+....--+|+|.+++. .|....+|.|+|....+..|+...
T Consensus 26 ~W~~~~~~~~~~~~~v~~~~~~~-~~~~G~~g~i~~s~DgG~tW~~~~ 72 (327)
T 2xbg_A 26 PWEAIQLPTTATILDMSFIDRHH-GWLVGVNATLMETRDGGQTWEPRT 72 (327)
T ss_dssp CEEEEECSCSSCEEEEEESSSSC-EEEEETTTEEEEESSTTSSCEECC
T ss_pred CceEeecCCCCcEEEEEECCCCc-EEEEcCCCeEEEeCCCCCCCeECC
Confidence 34445444333456778877776 666778999999865566788754
No 247
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=37.39 E-value=24 Score=26.93 Aligned_cols=31 Identities=19% Similarity=0.350 Sum_probs=26.0
Q ss_pred CCCCceeecCCCCc-ceEEeecceEEEEeCCC
Q 044375 59 LGPESIAFDPNGDG-PYTGVANGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~~G~g-~YTG~~DGrIlR~~~~~ 89 (116)
.++.+++|.++|.. +++|..||.|.-|+-..
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 56789999999874 66999999999998754
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=37.17 E-value=29 Score=30.28 Aligned_cols=32 Identities=34% Similarity=0.730 Sum_probs=26.1
Q ss_pred CCCCCCceeecCCCCcceEEe-ecceEEEEeCCC
Q 044375 57 GALGPESIAFDPNGDGPYTGV-ANGRILKWQGDE 89 (116)
Q Consensus 57 ~~~GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~~ 89 (116)
...||..++||++| ..||.. .|+.|.+|+-+.
T Consensus 329 vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 329 LGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred CCCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 34699999999999 599765 689999998643
No 249
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=36.88 E-value=20 Score=29.69 Aligned_cols=26 Identities=19% Similarity=0.231 Sum_probs=20.1
Q ss_pred CceeecCCCC--cceEEeecceEEEEeC
Q 044375 62 ESIAFDPNGD--GPYTGVANGRILKWQG 87 (116)
Q Consensus 62 EsiAfD~~G~--g~YTG~~DGrIlR~~~ 87 (116)
-+||+|..+. .+|.|+.||+|+|+.-
T Consensus 408 T~iav~~~~~~tV~FlGT~~G~l~Kv~~ 435 (527)
T 4fww_A 408 TALYVTRLDNVTVAHMGTMDGRILQVEL 435 (527)
T ss_dssp EEEEEEEETTEEEEEEEETTSEEEEEEC
T ss_pred EEEEEeccCCEEEEEEECCCCeEEEEEE
Confidence 4667777542 5899999999999864
No 250
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=36.15 E-value=24 Score=29.66 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=28.0
Q ss_pred ceeecCCCCcceEEeecceEEEEeCCCCCeEEEEE
Q 044375 63 SIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 63 siAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA~ 97 (116)
++..|++|. ++.|+.+|-|.++++....+..|..
T Consensus 314 ~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~ 347 (795)
T 4a2l_A 314 SIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRN 347 (795)
T ss_dssp EEEECTTSC-EEEEESSSCEEEECGGGGSSEEECC
T ss_pred EEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcC
Confidence 578899996 9999999999999876666766643
No 251
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=35.72 E-value=41 Score=28.31 Aligned_cols=44 Identities=23% Similarity=0.243 Sum_probs=30.2
Q ss_pred cCCCCCCCceeecCCCCcceEEe-ecceEEEEeCCCCC-e----EEEEEc
Q 044375 55 VTGALGPESIAFDPNGDGPYTGV-ANGRILKWQGDELG-W----TEFAVT 98 (116)
Q Consensus 55 ~~~~~GPEsiAfD~~G~g~YTG~-~DGrIlR~~~~~~~-w----~~fA~T 98 (116)
++....|-.||||++|+.+|..- ...||+|++.++.. + ..||-+
T Consensus 306 ~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~ 355 (496)
T 3kya_A 306 IADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGG 355 (496)
T ss_dssp CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEB
T ss_pred cCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCC
Confidence 34445677899999997678774 56899997665432 2 466665
No 252
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=35.67 E-value=28 Score=26.51 Aligned_cols=30 Identities=13% Similarity=0.251 Sum_probs=25.6
Q ss_pred CCCceeecCCCC-cceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGD-GPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~-g~YTG~~DGrIlR~~~~~ 89 (116)
..-++++.++|. .+++|..||.|.-|+...
T Consensus 183 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 213 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSASDDHTICLWDINA 213 (430)
T ss_dssp CCCCEEECTTSTTEEEEECTTSCEEEEETTS
T ss_pred CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCC
Confidence 457899999886 799999999999998754
No 253
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=35.35 E-value=39 Score=25.33 Aligned_cols=35 Identities=14% Similarity=0.213 Sum_probs=26.7
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCCCCeEEEE
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA 96 (116)
--++++++++. +|.+..+|.|++-...+..|+...
T Consensus 252 ~~~v~~~~~~~-~~~~g~~g~i~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 252 FLDLAYRTPNE-VWLAGGAGALLCSQDGGQTWQQDV 286 (327)
T ss_dssp EEEEEESSSSC-EEEEESTTCEEEESSTTSSCEECG
T ss_pred eEEEEecCCCE-EEEEeCCCeEEEeCCCCcccEEcC
Confidence 34677888886 899888999988665567798654
No 254
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=35.34 E-value=34 Score=29.62 Aligned_cols=34 Identities=21% Similarity=0.463 Sum_probs=26.8
Q ss_pred CceeecCC-CCcceEEeecceEEEEeCCCCCeEEE
Q 044375 62 ESIAFDPN-GDGPYTGVANGRILKWQGDELGWTEF 95 (116)
Q Consensus 62 EsiAfD~~-G~g~YTG~~DGrIlR~~~~~~~w~~f 95 (116)
-+|++++. ...+|.|..+|.|+|....+..|+..
T Consensus 18 ~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~ 52 (789)
T 1sqj_A 18 TGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPL 52 (789)
T ss_dssp EEEEECSSSTTCEEEEESSSCEEEEETTTTEEEES
T ss_pred EEEEECCCCCCEEEEEecCCCEEEecCCCCCeeEC
Confidence 45788874 23499999999999998777789874
No 255
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=34.76 E-value=61 Score=24.85 Aligned_cols=35 Identities=11% Similarity=-0.038 Sum_probs=26.3
Q ss_pred CCCceeecCCCCcceEEeecc---eEEEEeCCCCCeEE
Q 044375 60 GPESIAFDPNGDGPYTGVANG---RILKWQGDELGWTE 94 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DG---rIlR~~~~~~~w~~ 94 (116)
...+++|.++|+.++++..|+ .|+.|+........
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~ 217 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ 217 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE
Confidence 345679999998888888886 89999876544443
No 256
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=34.62 E-value=44 Score=27.93 Aligned_cols=34 Identities=15% Similarity=0.108 Sum_probs=28.3
Q ss_pred ceeecCCCCcceEEeecceEEEEeCCCCCeEEEEE
Q 044375 63 SIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 63 siAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA~ 97 (116)
++..|++|. ++.|+.+|-|.+++.....+..|.+
T Consensus 317 ~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~ 350 (781)
T 3v9f_A 317 YIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSY 350 (781)
T ss_dssp EEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC-
T ss_pred EEEEeCCCC-EEEEecCCeEEEeCCCCCcceeecc
Confidence 578899996 9999999999999987767777654
No 257
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=34.42 E-value=37 Score=29.23 Aligned_cols=36 Identities=17% Similarity=0.424 Sum_probs=28.8
Q ss_pred CceeecCCC-CcceEEeecceEEEEeCCCCCeEEEEE
Q 044375 62 ESIAFDPNG-DGPYTGVANGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 62 EsiAfD~~G-~g~YTG~~DGrIlR~~~~~~~w~~fA~ 97 (116)
-+|++++.+ ..+|.++..|.|+|....+..|+....
T Consensus 24 ~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~ 60 (763)
T 3a0f_A 24 SGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITD 60 (763)
T ss_dssp EEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCT
T ss_pred eEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECcc
Confidence 468888864 459999999999999877778887544
No 258
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=34.38 E-value=22 Score=26.88 Aligned_cols=23 Identities=9% Similarity=0.140 Sum_probs=16.7
Q ss_pred CceeecCCCCcceEEeecceEEEE
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKW 85 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~ 85 (116)
.+++|.+||+.+-+++.|| |+.|
T Consensus 363 ~svafspdG~~LA~as~~G-v~lv 385 (393)
T 4gq1_A 363 VDFCWHQDGSHLAIATEGS-VLLT 385 (393)
T ss_dssp EEEEECTTSSEEEEEESSE-EEEE
T ss_pred EEEEEcCCCCEEEEEeCCC-eEEE
Confidence 5789999999777776665 4433
No 259
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=33.67 E-value=62 Score=26.93 Aligned_cols=33 Identities=12% Similarity=0.257 Sum_probs=27.0
Q ss_pred ceeecCCCCcceEEeecceEEEEeCCCCCeEEEEE
Q 044375 63 SIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAV 97 (116)
Q Consensus 63 siAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA~ 97 (116)
+|..|++|+ ++.|+ +|-|.++++....++.|..
T Consensus 377 ~i~~d~~g~-lWigt-~~GL~~~~~~~~~~~~~~~ 409 (758)
T 3ott_A 377 HIYEDKEQQ-LWIAT-DGSINRYDYATRQFIHYNI 409 (758)
T ss_dssp EEEECTTSC-EEEEE-TTEEEEEETTTTEEEEEEE
T ss_pred EEEECCCCC-EEEEe-CCcHhhcCcCCCcEEEeec
Confidence 567799997 99999 6789999987767877764
No 260
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=33.28 E-value=1.3e+02 Score=21.46 Aligned_cols=28 Identities=7% Similarity=-0.047 Sum_probs=23.0
Q ss_pred eeecCCCCcceEEeecceEEEEeCCCCC
Q 044375 64 IAFDPNGDGPYTGVANGRILKWQGDELG 91 (116)
Q Consensus 64 iAfD~~G~g~YTG~~DGrIlR~~~~~~~ 91 (116)
+++.+||+.++.+..++.|+.|+.++..
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 6789999889888888899999876543
No 261
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=32.83 E-value=18 Score=28.41 Aligned_cols=28 Identities=7% Similarity=-0.107 Sum_probs=23.8
Q ss_pred CCCceeecCCCCcce----EEeecceEEEEeC
Q 044375 60 GPESIAFDPNGDGPY----TGVANGRILKWQG 87 (116)
Q Consensus 60 GPEsiAfD~~G~g~Y----TG~~DGrIlR~~~ 87 (116)
...+++|.++|+.++ +|..||.|.-|+.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~ 125 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDV 125 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEH
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEc
Confidence 367899999998888 7888999998864
No 262
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=32.75 E-value=36 Score=25.90 Aligned_cols=37 Identities=5% Similarity=0.004 Sum_probs=27.3
Q ss_pred CCCCceeecCCCCcceE-EeecceEEEEeCCCCCeEEE
Q 044375 59 LGPESIAFDPNGDGPYT-GVANGRILKWQGDELGWTEF 95 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YT-G~~DGrIlR~~~~~~~w~~f 95 (116)
.-+..+++|++++.+|+ .-.+++|++++..+.-+..+
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i 64 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTI 64 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEE
Confidence 45778899988766997 66788999988775434443
No 263
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=31.87 E-value=21 Score=28.71 Aligned_cols=29 Identities=10% Similarity=0.212 Sum_probs=23.3
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
-+.+++|.+||+.+|+ ..||.|..|+..+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~ 46 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVET 46 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGG
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCC
Confidence 3778899999986666 6899999997643
No 264
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=30.28 E-value=74 Score=27.63 Aligned_cols=32 Identities=13% Similarity=-0.008 Sum_probs=27.1
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDELG 91 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~ 91 (116)
.+.+++|.+||+.++++..|+.|..|+.....
T Consensus 380 ~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~ 411 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVANDRFEIMTVDLETGK 411 (1045)
T ss_dssp SEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred ceeeeEECCCCCEEEEECCCCeEEEEECCCCc
Confidence 45688999999989999999999999876543
No 265
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=29.56 E-value=29 Score=28.93 Aligned_cols=33 Identities=15% Similarity=0.368 Sum_probs=24.5
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCCCCeEEE
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDELGWTEF 95 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~f 95 (116)
+-++..|.+|. ++.|+.+| |.++++....++.|
T Consensus 519 ~~~i~~d~~g~-lWigt~~G-l~~~~~~~~~~~~~ 551 (758)
T 3ott_A 519 PNYLLCDEDGL-LWVGFHGG-VMRINPKDESQQSI 551 (758)
T ss_dssp EEEEEECTTSC-EEEEETTE-EEEECC--CCCCBC
T ss_pred cceEEECCCCC-EEEEecCc-eEEEecCCCceEEe
Confidence 45678899997 99999755 99999876666655
No 266
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=28.65 E-value=34 Score=28.02 Aligned_cols=28 Identities=14% Similarity=0.203 Sum_probs=22.8
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
-.+++|.+++. +++|..||.|.-|+...
T Consensus 269 v~sv~~s~~~~-lasgs~DgtV~lWD~~~ 296 (524)
T 2j04_B 269 ITTFDFLSPTT-VVCGFKNGFVAEFDLTD 296 (524)
T ss_dssp EEEEEESSSSE-EEEEETTSEEEEEETTB
T ss_pred EEEEEecCCCe-EEEEeCCCEEEEEECCC
Confidence 34688887764 99999999999998753
No 267
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=28.36 E-value=83 Score=25.38 Aligned_cols=20 Identities=5% Similarity=0.028 Sum_probs=17.8
Q ss_pred CCceeecCCCCcceEEeecc
Q 044375 61 PESIAFDPNGDGPYTGVANG 80 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DG 80 (116)
+.++++.+||+.++++..|+
T Consensus 211 ~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 211 HTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp CCSEEECTTSSCEEEEEEEC
T ss_pred ccceEECCCCCEEEEEEEcC
Confidence 57899999999899998887
No 268
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=27.71 E-value=1.1e+02 Score=21.94 Aligned_cols=31 Identities=16% Similarity=-0.017 Sum_probs=21.5
Q ss_pred CCceeecCCCCcceEEeec-----ceEEEEeCCCCC
Q 044375 61 PESIAFDPNGDGPYTGVAN-----GRILKWQGDELG 91 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~D-----GrIlR~~~~~~~ 91 (116)
+.+++|.++|+.+|.+..+ +.|..|+.....
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE 275 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCC
Confidence 3446999999877766655 458888865433
No 269
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=26.88 E-value=36 Score=25.63 Aligned_cols=25 Identities=12% Similarity=0.295 Sum_probs=20.3
Q ss_pred eecCCCCcceEEeecceEEEEeCCC
Q 044375 65 AFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 65 AfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
++..+|+.+++|..||.|.-|+...
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~~ 148 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAVT 148 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTT
T ss_pred EEEEcCCEEEEEECCCcEEEEECCC
Confidence 4455577899999999999998754
No 270
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=26.77 E-value=49 Score=26.39 Aligned_cols=29 Identities=7% Similarity=-0.103 Sum_probs=24.1
Q ss_pred CCceeecCCCCcceEEeec----------ceEEEEeCCC
Q 044375 61 PESIAFDPNGDGPYTGVAN----------GRILKWQGDE 89 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~D----------GrIlR~~~~~ 89 (116)
..+++|.+||+.+|.+..| ..|++|+.++
T Consensus 132 ~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 132 WADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred ccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 4578899999989988888 6899998765
No 271
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=26.51 E-value=85 Score=23.96 Aligned_cols=30 Identities=7% Similarity=0.141 Sum_probs=26.0
Q ss_pred CCceeecCCCCcceEEeecceEEEEeCCCC
Q 044375 61 PESIAFDPNGDGPYTGVANGRILKWQGDEL 90 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGrIlR~~~~~~ 90 (116)
||-..+.+||+-+|++-.+++|..+++...
T Consensus 107 ~~g~glt~Dg~~l~vs~gs~~l~viD~~t~ 136 (266)
T 2iwa_A 107 KDGWGLATDGKILYGSDGTSILYEIDPHTF 136 (266)
T ss_dssp SSCCEEEECSSSEEEECSSSEEEEECTTTC
T ss_pred CCeEEEEECCCEEEEECCCCeEEEEECCCC
Confidence 888888888888999998999999998653
No 272
>2x8n_A CV0863; non-uniform sampling, multidimensional decomposition, abacus, fragment monte carlo, structural genomics; NMR {Chromobacterium violaceum atcc 12472}
Probab=26.37 E-value=36 Score=23.42 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=29.3
Q ss_pred CCCceeecCCCCcceEEeecceEEEEeCCCCCeEEEEEcCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFAVTTSQ 101 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA~Ts~~ 101 (116)
-+.++.||++...++....|||.+.+-... +..+.+.|+.
T Consensus 26 ~a~~V~~~~~~~~l~v~L~dGr~l~~Pl~~--~p~L~~At~e 65 (111)
T 2x8n_A 26 TLRSVQYRSEEGVIVFILANDRELKFRPDD--LQATYGATPE 65 (111)
T ss_dssp CEEEEEEETTTTEEEEEETTCCEEEECTTT--SSTTTTCCTT
T ss_pred eeEEEEEEccCCEEEEEECCCCEEEeeHHH--HHHHhcCCHH
Confidence 467889977777799999999999986542 3444555444
No 273
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=26.31 E-value=68 Score=25.95 Aligned_cols=31 Identities=6% Similarity=0.075 Sum_probs=24.9
Q ss_pred CCCceeecCCCCcceEEee---------cceEEEEeCCCC
Q 044375 60 GPESIAFDPNGDGPYTGVA---------NGRILKWQGDEL 90 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~---------DGrIlR~~~~~~ 90 (116)
+..+++|.+||+-++.+.. |+.|..|+.++.
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g 100 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG 100 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC
Confidence 4678999999997887776 789999986543
No 274
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=26.06 E-value=1.1e+02 Score=25.46 Aligned_cols=31 Identities=13% Similarity=0.044 Sum_probs=24.8
Q ss_pred CCCCceeec----CCCCcceEEeec-ceEEEEeCCC
Q 044375 59 LGPESIAFD----PNGDGPYTGVAN-GRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD----~~G~g~YTG~~D-GrIlR~~~~~ 89 (116)
.+|+.++|+ +||+.+|++..+ +.|.-|+...
T Consensus 240 ~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 240 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 589999999 699889988765 7777777543
No 275
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=25.98 E-value=40 Score=29.39 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=19.3
Q ss_pred CceeecC----CCC---cceEEeecceEEEEeC
Q 044375 62 ESIAFDP----NGD---GPYTGVANGRILKWQG 87 (116)
Q Consensus 62 EsiAfD~----~G~---g~YTG~~DGrIlR~~~ 87 (116)
-+||+|. +|+ .+|-|+.||+|+|+.-
T Consensus 400 T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~ 432 (663)
T 1olz_A 400 TQIVVDRTQALDGTVYDVMFVSTDRGALHKAIS 432 (663)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTSEEEEEEE
T ss_pred EEEEEEEEeccCCCceEEEEEEcCCcEEEEEEe
Confidence 4677753 443 6899999999999843
No 276
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=25.67 E-value=31 Score=25.96 Aligned_cols=27 Identities=19% Similarity=-0.040 Sum_probs=21.1
Q ss_pred CCceeecCCCCcceEEeecce----EEEEeC
Q 044375 61 PESIAFDPNGDGPYTGVANGR----ILKWQG 87 (116)
Q Consensus 61 PEsiAfD~~G~g~YTG~~DGr----IlR~~~ 87 (116)
.-+++|+++|..+++|..||. |.-|+=
T Consensus 410 v~~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 410 VWRIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp EEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred EEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 456899999988899999997 555543
No 277
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=25.13 E-value=63 Score=24.31 Aligned_cols=25 Identities=12% Similarity=0.352 Sum_probs=20.2
Q ss_pred eecCCCCcceEEeecceEEEEeCCC
Q 044375 65 AFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 65 AfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
++..+|+.+++|..||.|.-|+...
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~ 162 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNT 162 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSS
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCC
Confidence 4455677899999999999998654
No 278
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=25.06 E-value=91 Score=25.00 Aligned_cols=32 Identities=6% Similarity=-0.075 Sum_probs=25.0
Q ss_pred CCCceeecCCCCcceEEeec---------ceEEEEeCCCCC
Q 044375 60 GPESIAFDPNGDGPYTGVAN---------GRILKWQGDELG 91 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~D---------GrIlR~~~~~~~ 91 (116)
+..+++|.+||+-++++..| +.|+.|+.++..
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 102 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD 102 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc
Confidence 47899999999878887764 778888876543
No 279
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=25.00 E-value=40 Score=28.39 Aligned_cols=45 Identities=18% Similarity=0.063 Sum_probs=32.6
Q ss_pred cCCCCCCCceeecCC-CCcceEEeec-ceEEEEeCCCCCeEEEEEcC
Q 044375 55 VTGALGPESIAFDPN-GDGPYTGVAN-GRILKWQGDELGWTEFAVTT 99 (116)
Q Consensus 55 ~~~~~GPEsiAfD~~-G~g~YTG~~D-GrIlR~~~~~~~w~~fA~Ts 99 (116)
......|.-|+|||. ++.+|..-.+ ++|.+++..+.....++..+
T Consensus 135 ~~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~ 181 (496)
T 3kya_A 135 CCGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNIN 181 (496)
T ss_dssp CBCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCT
T ss_pred ccccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccC
Confidence 344567999999983 3349998875 78889998776666666543
No 280
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=24.36 E-value=77 Score=23.83 Aligned_cols=27 Identities=11% Similarity=0.246 Sum_probs=21.0
Q ss_pred CceeecCCCCcceEEeecceEEEEeCCCC
Q 044375 62 ESIAFDPNGDGPYTGVANGRILKWQGDEL 90 (116)
Q Consensus 62 EsiAfD~~G~g~YTG~~DGrIlR~~~~~~ 90 (116)
-++++ +|+.+++|..||.|.-|+....
T Consensus 177 ~~l~~--~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 177 LCLQY--DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp EEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred EEEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence 34555 5667999999999999987543
No 281
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=23.86 E-value=92 Score=25.02 Aligned_cols=31 Identities=10% Similarity=0.229 Sum_probs=25.2
Q ss_pred CCCceeecCCCCcceEEeecc-----eEEEEeCCCC
Q 044375 60 GPESIAFDPNGDGPYTGVANG-----RILKWQGDEL 90 (116)
Q Consensus 60 GPEsiAfD~~G~g~YTG~~DG-----rIlR~~~~~~ 90 (116)
++.+++|.+||+.+|++..|+ +|+.|+....
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 345789999998899988886 8999987654
No 282
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=22.66 E-value=89 Score=23.74 Aligned_cols=25 Identities=4% Similarity=0.123 Sum_probs=16.9
Q ss_pred ceeecCCCCcceEEeecceEEEEeCCC
Q 044375 63 SIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 63 siAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
+.+++ +| -+|+|+.||.|.-|+...
T Consensus 4 sP~v~-~~-~v~~gs~dg~v~a~d~~t 28 (369)
T 2hz6_A 4 TVTLP-ET-LLFVSTLDGSLHAVSKRT 28 (369)
T ss_dssp ----C-TT-EEEEEETTSEEEEEETTT
T ss_pred CCeee-CC-EEEEEcCCCEEEEEECCC
Confidence 44554 34 599999999999999644
No 283
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=22.44 E-value=1.5e+02 Score=23.76 Aligned_cols=30 Identities=27% Similarity=0.340 Sum_probs=24.2
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCC
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~ 89 (116)
....+++|.+||+.++. +.|+.|+.|+..+
T Consensus 121 ~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~ 150 (706)
T 2z3z_A 121 EETASLDFSPVGDRVAY-VRNHNLYIARGGK 150 (706)
T ss_dssp TCCTTCEECTTSSEEEE-EETTEEEEEECBC
T ss_pred ccccCCcCCCCCCEEEE-EECCeEEEEecCc
Confidence 35678899999986777 6899999998654
No 284
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=21.72 E-value=31 Score=26.06 Aligned_cols=28 Identities=7% Similarity=0.108 Sum_probs=22.5
Q ss_pred CceeecC--------CCCcceEEeecceEEEEeCCC
Q 044375 62 ESIAFDP--------NGDGPYTGVANGRILKWQGDE 89 (116)
Q Consensus 62 EsiAfD~--------~G~g~YTG~~DGrIlR~~~~~ 89 (116)
.+++|.+ ||+.+.+|..|+.|.-|+...
T Consensus 140 ~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 140 NDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp EEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred EEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 4678865 788899999999999998643
No 285
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=21.06 E-value=95 Score=22.70 Aligned_cols=38 Identities=16% Similarity=0.222 Sum_probs=26.3
Q ss_pred CCCCceeecCCCCcceEEeecceEEEEeCCCCCeEEEE
Q 044375 59 LGPESIAFDPNGDGPYTGVANGRILKWQGDELGWTEFA 96 (116)
Q Consensus 59 ~GPEsiAfD~~G~g~YTG~~DGrIlR~~~~~~~w~~fA 96 (116)
-|=|=+.|.++|+..-+|+..|..--++..+..|.+|-
T Consensus 110 RGlEp~eF~p~~~w~a~~~esG~f~dvDLse~eW~DYD 147 (164)
T 1zso_A 110 RGIELIDFFPSNNFIVEDTKGKLYYDVNLSDQNWCDYN 147 (164)
T ss_dssp ESEEEEEECCCSCEEEEETTSCEEEEECCTTSCEEEEE
T ss_pred CCeeeEEEecCCcEEEEECCCCcEEeeecCCCceeccc
Confidence 36677788888865556666774445777766799874
No 286
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=20.91 E-value=54 Score=27.70 Aligned_cols=45 Identities=11% Similarity=0.153 Sum_probs=30.6
Q ss_pred eeccC-CCCCCCceee--cCCCCcceEEee------cceEEEEeCCCCCeEEEE
Q 044375 52 IIQVT-GALGPESIAF--DPNGDGPYTGVA------NGRILKWQGDELGWTEFA 96 (116)
Q Consensus 52 ~l~~~-~~~GPEsiAf--D~~G~g~YTG~~------DGrIlR~~~~~~~w~~fA 96 (116)
.|.++ ...||-.|.| +++|+..|.+.. ++.|+.|..++..|+.-.
T Consensus 243 tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~ 296 (462)
T 2ece_A 243 SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEK 296 (462)
T ss_dssp EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEE
T ss_pred EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEE
Confidence 45554 3457887755 999999999985 668876655444565443
No 287
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=20.06 E-value=22 Score=26.37 Aligned_cols=12 Identities=33% Similarity=0.396 Sum_probs=0.0
Q ss_pred CCchhhHHHHHH
Q 044375 1 MNRNKKIVASAA 12 (116)
Q Consensus 1 ~~~~~~~~~~a~ 12 (116)
|+.+|+++.+++
T Consensus 25 Mk~~kk~~la~~ 36 (175)
T 3lay_A 25 MKRNNKSAIALI 36 (175)
T ss_dssp ------------
T ss_pred HHHHHHHHHHHH
Confidence 667677666555
Done!