Query 044384
Match_columns 322
No_of_seqs 222 out of 1318
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 04:14:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044384.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044384hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1E-46 3.5E-51 351.9 23.7 286 3-302 13-313 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 8.9E-42 3E-46 323.3 24.2 301 1-302 6-335 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 1E-37 3.5E-42 294.9 28.3 284 3-302 6-308 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 6.9E-38 2.3E-42 294.2 24.8 291 2-302 6-311 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 8.8E-38 3E-42 294.2 21.5 286 3-301 9-316 (463)
6 2iya_A OLEI, oleandomycin glyc 99.9 6.8E-23 2.3E-27 190.6 23.7 263 1-300 10-293 (424)
7 1iir_A Glycosyltransferase GTF 99.9 7.2E-21 2.5E-25 176.6 15.4 252 4-302 1-277 (415)
8 1rrv_A Glycosyltransferase GTF 99.8 1.3E-19 4.5E-24 168.1 13.8 253 4-302 1-278 (416)
9 4amg_A Snogd; transferase, pol 99.8 5.6E-18 1.9E-22 155.8 16.7 122 3-137 22-158 (400)
10 2iyf_A OLED, oleandomycin glyc 99.8 4.1E-17 1.4E-21 151.7 22.2 241 1-294 5-257 (430)
11 3ia7_A CALG4; glycosysltransfe 99.7 8.9E-16 3E-20 141.0 23.0 241 1-294 2-256 (402)
12 3rsc_A CALG2; TDP, enediyne, s 99.7 6.1E-15 2.1E-19 136.3 22.0 239 3-294 20-272 (415)
13 2p6p_A Glycosyl transferase; X 99.6 1.8E-14 6.3E-19 131.7 17.0 225 4-300 1-253 (384)
14 3h4t_A Glycosyltransferase GTF 99.6 1.6E-15 5.6E-20 140.0 9.6 247 4-302 1-260 (404)
15 2yjn_A ERYCIII, glycosyltransf 99.6 2.6E-14 9E-19 133.3 15.7 123 3-137 20-174 (441)
16 3otg_A CALG1; calicheamicin, T 99.2 2.4E-09 8.4E-14 98.3 21.6 119 3-136 20-159 (412)
17 3oti_A CALG3; calicheamicin, T 99.1 3.8E-10 1.3E-14 103.6 12.7 117 3-135 20-158 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.0 1.3E-09 4.3E-14 99.6 10.8 119 3-136 1-143 (391)
19 4fzr_A SSFS6; structural genom 99.0 7.2E-10 2.4E-14 101.6 8.0 120 3-137 15-153 (398)
20 3s2u_A UDP-N-acetylglucosamine 98.5 3.7E-07 1.3E-11 82.7 10.9 114 1-134 1-121 (365)
21 1f0k_A MURG, UDP-N-acetylgluco 97.9 6E-05 2.1E-09 67.5 11.2 118 1-135 2-126 (364)
22 2o6l_A UDP-glucuronosyltransfe 96.7 0.00096 3.3E-08 52.9 3.6 48 254-301 6-61 (170)
23 3fro_A GLGA glycogen synthase; 96.5 0.033 1.1E-06 50.5 12.9 132 2-135 1-152 (439)
24 3okp_A GDP-mannose-dependent a 96.2 0.019 6.5E-07 51.3 9.2 109 1-135 2-116 (394)
25 2iuy_A Avigt4, glycosyltransfe 95.8 0.0093 3.2E-07 52.6 5.3 41 1-41 1-57 (342)
26 3c48_A Predicted glycosyltrans 95.8 0.045 1.6E-06 49.8 9.9 120 3-136 20-153 (438)
27 2r60_A Glycosyl transferase, g 95.6 0.039 1.3E-06 51.4 8.8 123 4-135 8-150 (499)
28 2jjm_A Glycosyl transferase, g 94.6 0.41 1.4E-05 42.7 12.2 112 4-136 16-133 (394)
29 2iw1_A Lipopolysaccharide core 93.4 0.29 9.9E-06 43.1 8.7 37 5-41 2-41 (374)
30 2gek_A Phosphatidylinositol ma 92.7 0.54 1.8E-05 41.9 9.5 40 3-42 20-63 (406)
31 1v4v_A UDP-N-acetylglucosamine 91.3 1.6 5.6E-05 38.4 10.9 112 4-135 6-122 (376)
32 3beo_A UDP-N-acetylglucosamine 90.0 2.3 8E-05 37.2 10.6 38 3-41 8-47 (375)
33 2x6q_A Trehalose-synthase TRET 89.3 0.54 1.8E-05 42.3 5.9 42 1-42 38-81 (416)
34 3ot5_A UDP-N-acetylglucosamine 89.2 0.98 3.3E-05 40.8 7.5 112 1-135 25-145 (403)
35 3dzc_A UDP-N-acetylglucosamine 88.7 1.4 4.7E-05 39.7 8.2 115 1-135 23-142 (396)
36 1vgv_A UDP-N-acetylglucosamine 88.3 2 6.8E-05 37.9 9.0 34 5-39 2-36 (384)
37 1g5t_A COB(I)alamin adenosyltr 85.1 13 0.00044 29.8 11.1 97 4-117 29-130 (196)
38 1psw_A ADP-heptose LPS heptosy 84.2 9.2 0.00031 33.1 11.0 102 5-134 2-108 (348)
39 3s28_A Sucrose synthase 1; gly 83.3 0.93 3.2E-05 45.0 4.3 105 22-134 318-436 (816)
40 2x0d_A WSAF; GT4 family, trans 82.9 0.88 3E-05 41.3 3.8 39 3-41 46-89 (413)
41 3tov_A Glycosyl transferase fa 81.6 6.6 0.00023 34.5 9.0 105 3-134 8-117 (349)
42 1id1_A Putative potassium chan 81.5 1.7 6E-05 33.0 4.6 35 1-40 1-35 (153)
43 3vue_A GBSS-I, granule-bound s 80.7 1.9 6.6E-05 40.5 5.4 38 3-40 9-52 (536)
44 1ccw_A Protein (glutamate muta 80.3 4.3 0.00015 30.5 6.2 43 1-43 1-43 (137)
45 2hy7_A Glucuronosyltransferase 80.1 11 0.00038 33.6 10.1 36 3-40 14-52 (406)
46 1rzu_A Glycogen synthase 1; gl 79.6 1.7 5.8E-05 39.8 4.5 37 5-41 2-44 (485)
47 2qzs_A Glycogen synthase; glyc 78.7 2 6.7E-05 39.4 4.7 37 5-41 2-44 (485)
48 3bfv_A CAPA1, CAPB2, membrane 78.3 18 0.00062 30.4 10.3 38 4-41 82-121 (271)
49 2wqk_A 5'-nucleotidase SURE; S 77.3 4 0.00014 34.3 5.7 24 19-43 16-39 (251)
50 3hbm_A UDP-sugar hydrolase; PS 76.9 3.2 0.00011 35.5 5.1 92 6-136 3-101 (282)
51 4dzz_A Plasmid partitioning pr 75.2 15 0.00053 28.8 8.7 32 11-42 10-41 (206)
52 4hwg_A UDP-N-acetylglucosamine 74.9 16 0.00056 32.5 9.5 105 11-135 16-124 (385)
53 3cio_A ETK, tyrosine-protein k 73.8 24 0.00081 30.1 10.0 38 4-41 104-143 (299)
54 2lpm_A Two-component response 73.6 2.7 9.1E-05 31.0 3.3 30 106-135 52-86 (123)
55 3to5_A CHEY homolog; alpha(5)b 71.7 4.4 0.00015 30.3 4.2 35 106-140 56-99 (134)
56 2phj_A 5'-nucleotidase SURE; S 71.7 7.2 0.00025 32.6 5.8 28 16-44 13-40 (251)
57 3oti_A CALG3; calicheamicin, T 65.2 3.1 0.00011 37.0 2.5 44 258-301 221-273 (398)
58 3qjg_A Epidermin biosynthesis 63.0 12 0.00043 29.3 5.3 40 4-44 6-45 (175)
59 3qxc_A Dethiobiotin synthetase 62.3 20 0.00067 29.7 6.8 34 5-38 22-57 (242)
60 3gl9_A Response regulator; bet 61.7 12 0.00041 26.5 4.8 34 106-139 45-87 (122)
61 3la6_A Tyrosine-protein kinase 60.6 66 0.0023 27.1 10.0 39 4-42 92-132 (286)
62 3q9l_A Septum site-determining 58.8 69 0.0024 25.9 9.7 37 5-41 3-41 (260)
63 3zqu_A Probable aromatic acid 57.8 20 0.0007 28.9 5.9 43 3-46 4-46 (209)
64 2yxb_A Coenzyme B12-dependent 57.2 62 0.0021 24.7 10.8 39 3-41 18-56 (161)
65 2r8r_A Sensor protein; KDPD, P 56.8 15 0.00052 30.1 5.0 39 3-41 6-44 (228)
66 1y80_A Predicted cobalamin bin 55.8 24 0.00082 28.2 6.1 43 3-45 88-130 (210)
67 3t6k_A Response regulator rece 54.2 20 0.00068 25.9 5.0 34 106-139 47-89 (136)
68 1mvl_A PPC decarboxylase athal 53.1 22 0.00074 28.8 5.3 41 3-45 19-59 (209)
69 3vot_A L-amino acid ligase, BL 51.3 54 0.0018 29.2 8.3 26 106-131 74-101 (425)
70 1lss_A TRK system potassium up 50.9 22 0.00075 25.7 4.8 33 3-40 4-36 (140)
71 3lqk_A Dipicolinate synthase s 50.3 22 0.00075 28.6 4.9 39 3-42 7-46 (201)
72 1g63_A Epidermin modifying enz 50.2 19 0.00064 28.4 4.4 43 1-45 1-43 (181)
73 3llv_A Exopolyphosphatase-rela 50.1 16 0.00055 26.8 3.9 33 4-41 7-39 (141)
74 2i2x_B MTAC, methyltransferase 49.9 34 0.0012 28.5 6.2 38 3-40 123-160 (258)
75 2ejb_A Probable aromatic acid 49.5 31 0.001 27.4 5.6 42 5-47 3-44 (189)
76 3f6p_A Transcriptional regulat 49.3 27 0.00092 24.4 5.0 34 106-139 45-84 (120)
77 4fzr_A SSFS6; structural genom 48.9 4.5 0.00016 35.9 0.7 45 257-301 215-274 (398)
78 3gpi_A NAD-dependent epimerase 48.1 22 0.00075 29.7 4.9 35 1-40 1-35 (286)
79 3oy2_A Glycosyltransferase B73 47.3 17 0.00058 32.1 4.2 36 5-41 2-40 (413)
80 3m6m_D Sensory/regulatory prot 47.0 24 0.00084 25.7 4.5 33 106-138 57-100 (143)
81 2yvq_A Carbamoyl-phosphate syn 46.5 32 0.0011 25.8 5.1 89 15-133 34-130 (143)
82 3mcu_A Dipicolinate synthase, 45.6 27 0.00092 28.2 4.7 40 3-43 5-45 (207)
83 1sbz_A Probable aromatic acid 44.7 37 0.0013 27.1 5.4 41 5-46 2-43 (197)
84 4b4o_A Epimerase family protei 44.2 15 0.00052 30.9 3.2 33 5-41 2-34 (298)
85 3hr8_A Protein RECA; alpha and 44.1 1E+02 0.0035 27.0 8.7 37 6-42 64-100 (356)
86 1qzu_A Hypothetical protein MD 42.9 23 0.00077 28.6 3.9 42 3-45 19-61 (206)
87 4dim_A Phosphoribosylglycinami 42.4 84 0.0029 27.6 8.1 35 1-40 5-39 (403)
88 1hdo_A Biliverdin IX beta redu 42.3 58 0.002 25.1 6.4 36 1-40 1-36 (206)
89 3ezx_A MMCP 1, monomethylamine 42.2 51 0.0018 26.6 6.0 43 3-45 92-134 (215)
90 3lyu_A Putative hydrogenase; t 42.0 22 0.00074 26.5 3.5 36 5-43 20-55 (142)
91 1p3y_1 MRSD protein; flavoprot 42.0 20 0.00068 28.6 3.4 40 4-44 9-48 (194)
92 4gi5_A Quinone reductase; prot 41.2 47 0.0016 28.1 5.8 39 1-39 20-61 (280)
93 2gk4_A Conserved hypothetical 40.5 21 0.00073 29.3 3.4 21 20-40 32-52 (232)
94 3mc3_A DSRE/DSRF-like family p 40.3 42 0.0014 24.7 4.9 37 5-41 17-56 (134)
95 1dbw_A Transcriptional regulat 39.5 51 0.0018 22.9 5.2 34 106-139 46-86 (126)
96 2xj4_A MIPZ; replication, cell 39.5 32 0.0011 28.9 4.6 41 1-41 1-43 (286)
97 3gt7_A Sensor protein; structu 39.5 43 0.0015 24.6 4.9 34 106-139 50-92 (154)
98 1xp8_A RECA protein, recombina 38.8 45 0.0015 29.4 5.5 39 6-44 77-115 (366)
99 3kkl_A Probable chaperone prot 38.0 59 0.002 26.8 5.8 41 1-41 1-52 (244)
100 3zzm_A Bifunctional purine bio 37.8 2.3E+02 0.0079 26.2 10.0 39 5-48 11-49 (523)
101 2q5c_A NTRC family transcripti 37.8 23 0.00079 28.2 3.2 43 91-139 129-171 (196)
102 3qvl_A Putative hydantoin race 37.8 58 0.002 26.8 5.8 30 106-135 68-98 (245)
103 3c3m_A Response regulator rece 37.3 58 0.002 23.2 5.2 32 106-137 46-86 (138)
104 1e2b_A Enzyme IIB-cellobiose; 37.0 57 0.0019 23.0 4.9 39 1-39 1-39 (106)
105 3a10_A Response regulator; pho 36.3 66 0.0023 21.8 5.3 32 106-137 44-82 (116)
106 2w36_A Endonuclease V; hypoxan 35.7 15 0.00052 30.0 1.8 42 92-137 92-140 (225)
107 2rjn_A Response regulator rece 35.4 55 0.0019 23.9 4.9 34 106-139 50-90 (154)
108 3kkj_A Amine oxidase, flavin-c 35.3 21 0.0007 28.7 2.6 19 20-38 14-32 (336)
109 2zts_A Putative uncharacterize 35.2 1.7E+02 0.0057 23.2 8.7 41 6-46 33-74 (251)
110 3ghy_A Ketopantoate reductase 34.6 27 0.00094 30.2 3.4 35 1-40 1-35 (335)
111 3a28_C L-2.3-butanediol dehydr 34.5 1.7E+02 0.0059 23.6 8.4 22 19-40 14-35 (258)
112 3cu5_A Two component transcrip 34.4 60 0.002 23.3 4.9 31 106-136 48-85 (141)
113 2qr3_A Two-component system re 34.1 72 0.0024 22.5 5.3 34 106-139 46-91 (140)
114 1tmy_A CHEY protein, TMY; chem 34.1 52 0.0018 22.6 4.4 34 106-139 46-86 (120)
115 2qxy_A Response regulator; reg 34.0 55 0.0019 23.3 4.7 33 106-139 47-86 (142)
116 2bi7_A UDP-galactopyranose mut 34.0 55 0.0019 28.8 5.4 35 1-40 1-35 (384)
117 1ehi_A LMDDL2, D-alanine:D-lac 33.7 35 0.0012 30.1 4.0 38 1-39 1-44 (377)
118 3nhm_A Response regulator; pro 33.5 68 0.0023 22.4 5.1 32 106-137 46-86 (133)
119 3ksu_A 3-oxoacyl-acyl carrier 33.4 1.6E+02 0.0055 24.0 8.0 32 5-39 12-43 (262)
120 1zgz_A Torcad operon transcrip 33.3 71 0.0024 21.9 5.1 34 106-139 45-84 (122)
121 3eod_A Protein HNR; response r 33.2 58 0.002 22.8 4.6 34 106-139 50-90 (130)
122 1bg6_A N-(1-D-carboxylethyl)-L 33.2 31 0.001 29.9 3.5 35 1-40 2-36 (359)
123 3hv2_A Response regulator/HD d 33.1 67 0.0023 23.3 5.1 34 106-139 57-97 (153)
124 3h1g_A Chemotaxis protein CHEY 32.9 75 0.0025 22.2 5.2 34 106-139 50-92 (129)
125 3r3s_A Oxidoreductase; structu 32.9 1.3E+02 0.0043 25.2 7.4 33 5-40 50-82 (294)
126 3cg0_A Response regulator rece 32.7 57 0.0019 23.1 4.5 34 106-139 53-93 (140)
127 3rqi_A Response regulator prot 32.6 39 0.0013 25.9 3.8 34 106-139 50-90 (184)
128 1jx7_A Hypothetical protein YC 32.6 64 0.0022 22.6 4.7 29 14-42 15-45 (117)
129 4e7p_A Response regulator; DNA 32.5 63 0.0022 23.4 4.8 43 94-139 56-105 (150)
130 3b2n_A Uncharacterized protein 32.3 50 0.0017 23.4 4.1 34 106-139 48-88 (133)
131 2pju_A Propionate catabolism o 32.1 63 0.0022 26.3 5.0 41 90-136 140-180 (225)
132 1u94_A RECA protein, recombina 32.0 86 0.003 27.4 6.2 37 6-42 66-102 (356)
133 3kjh_A CO dehydrogenase/acetyl 31.9 33 0.0011 27.7 3.3 37 5-41 2-38 (254)
134 1p6q_A CHEY2; chemotaxis, sign 31.8 65 0.0022 22.4 4.7 33 106-138 50-91 (129)
135 2rdm_A Response regulator rece 31.5 76 0.0026 22.1 5.0 32 107-138 50-89 (132)
136 2a9o_A Response regulator; ess 31.5 60 0.002 22.2 4.3 34 106-139 44-83 (120)
137 3kht_A Response regulator; PSI 31.3 81 0.0028 22.5 5.2 33 106-138 50-91 (144)
138 3n0r_A Response regulator; sig 31.1 63 0.0022 27.2 5.1 32 106-137 204-242 (286)
139 1p9o_A Phosphopantothenoylcyst 30.9 29 0.001 29.9 2.9 22 20-41 68-89 (313)
140 2bw0_A 10-FTHFDH, 10-formyltet 30.8 72 0.0024 27.7 5.4 34 1-39 20-53 (329)
141 2d1p_B TUSC, hypothetical UPF0 30.7 98 0.0033 22.0 5.4 40 1-41 1-42 (119)
142 1srr_A SPO0F, sporulation resp 30.5 55 0.0019 22.7 4.0 34 106-139 46-86 (124)
143 3lrx_A Putative hydrogenase; a 30.5 33 0.0011 26.0 2.9 36 5-43 25-60 (158)
144 3lte_A Response regulator; str 30.2 81 0.0028 22.0 5.0 33 106-138 49-89 (132)
145 3q0i_A Methionyl-tRNA formyltr 30.2 77 0.0026 27.3 5.5 37 1-42 5-41 (318)
146 1xhf_A DYE resistance, aerobic 30.1 91 0.0031 21.3 5.2 34 106-139 46-85 (123)
147 1jbe_A Chemotaxis protein CHEY 29.8 83 0.0028 21.8 4.9 33 106-138 48-89 (128)
148 3crn_A Response regulator rece 29.7 71 0.0024 22.5 4.6 33 106-138 46-85 (132)
149 3grc_A Sensor protein, kinase; 29.7 74 0.0025 22.5 4.7 33 106-138 49-90 (140)
150 2qzj_A Two-component response 29.7 72 0.0025 22.7 4.6 34 106-139 47-86 (136)
151 1kjn_A MTH0777; hypotethical p 29.3 95 0.0033 23.5 5.0 41 6-46 10-51 (157)
152 2jk1_A HUPR, hydrogenase trans 29.3 85 0.0029 22.2 5.0 33 106-138 43-82 (139)
153 1yio_A Response regulatory pro 29.2 62 0.0021 25.1 4.5 32 106-137 47-85 (208)
154 1u7z_A Coenzyme A biosynthesis 29.1 43 0.0015 27.4 3.4 22 19-40 36-57 (226)
155 2g1u_A Hypothetical protein TM 29.0 69 0.0024 23.8 4.5 33 3-40 19-51 (155)
156 2pl1_A Transcriptional regulat 28.9 1.1E+02 0.0037 20.8 5.4 34 106-139 43-83 (121)
157 2qs7_A Uncharacterized protein 28.9 63 0.0021 24.1 4.2 39 5-43 9-48 (144)
158 1mb3_A Cell division response 28.8 70 0.0024 22.0 4.4 32 106-137 44-84 (124)
159 3q9s_A DNA-binding response re 27.9 78 0.0027 25.7 5.0 34 106-139 80-119 (249)
160 3ew7_A LMO0794 protein; Q8Y8U8 27.8 42 0.0014 26.3 3.2 21 20-40 13-33 (221)
161 2a5l_A Trp repressor binding p 27.6 92 0.0031 24.1 5.2 40 1-40 3-43 (200)
162 2llz_A Uncharacterized protein 27.6 28 0.00095 24.2 1.7 20 275-294 56-75 (100)
163 4fu0_A D-alanine--D-alanine li 27.5 35 0.0012 29.8 2.9 37 1-38 1-42 (357)
164 2r85_A PURP protein PF1517; AT 27.5 65 0.0022 27.3 4.6 35 2-42 1-35 (334)
165 3jte_A Response regulator rece 27.4 93 0.0032 22.1 5.0 34 106-139 48-88 (143)
166 3cz5_A Two-component response 27.4 1.1E+02 0.0037 22.1 5.4 34 106-139 50-90 (153)
167 4dgk_A Phytoene dehydrogenase; 27.4 48 0.0016 30.1 3.9 31 1-38 1-31 (501)
168 3dqz_A Alpha-hydroxynitrIle ly 27.3 48 0.0016 26.2 3.5 39 1-40 1-40 (258)
169 2z1m_A GDP-D-mannose dehydrata 27.2 57 0.002 27.6 4.2 36 1-40 1-36 (345)
170 3e8x_A Putative NAD-dependent 27.2 43 0.0015 26.8 3.2 22 20-41 34-55 (236)
171 2vrn_A Protease I, DR1199; cys 27.1 1.5E+02 0.005 22.8 6.3 40 1-41 7-46 (190)
172 4ds3_A Phosphoribosylglycinami 27.1 2.4E+02 0.0082 22.5 8.6 108 1-137 5-117 (209)
173 1dhr_A Dihydropteridine reduct 27.0 79 0.0027 25.4 4.9 32 5-39 8-39 (241)
174 3i42_A Response regulator rece 26.8 88 0.003 21.6 4.6 32 106-137 46-86 (127)
175 3kto_A Response regulator rece 26.7 41 0.0014 24.0 2.8 34 106-139 49-91 (136)
176 2ew2_A 2-dehydropantoate 2-red 26.5 45 0.0015 28.1 3.3 34 2-40 2-35 (316)
177 4g6h_A Rotenone-insensitive NA 26.4 32 0.0011 31.8 2.5 34 3-41 42-75 (502)
178 2gt1_A Lipopolysaccharide hept 26.4 76 0.0026 26.9 4.8 42 5-46 2-45 (326)
179 3eq2_A Probable two-component 26.0 91 0.0031 27.3 5.4 34 106-139 48-88 (394)
180 3c97_A Signal transduction his 25.7 1.1E+02 0.0037 21.7 5.0 22 106-127 53-76 (140)
181 1qyd_A Pinoresinol-lariciresin 25.7 73 0.0025 26.6 4.6 36 1-40 1-37 (313)
182 3mm4_A Histidine kinase homolo 25.5 74 0.0025 24.9 4.3 32 107-138 119-161 (206)
183 3h2s_A Putative NADH-flavin re 25.5 49 0.0017 26.1 3.2 21 20-40 13-33 (224)
184 4gbj_A 6-phosphogluconate dehy 25.4 69 0.0024 27.2 4.3 33 1-39 4-36 (297)
185 2r25_B Osmosensing histidine p 25.3 1.3E+02 0.0046 21.0 5.4 34 106-139 51-92 (133)
186 1qyc_A Phenylcoumaran benzylic 25.0 77 0.0026 26.4 4.6 36 1-40 1-37 (308)
187 1yrb_A ATP(GTP)binding protein 25.0 83 0.0028 25.5 4.7 38 4-42 15-52 (262)
188 1qkk_A DCTD, C4-dicarboxylate 25.0 77 0.0026 23.0 4.1 34 106-139 46-86 (155)
189 3eul_A Possible nitrate/nitrit 24.7 86 0.003 22.6 4.3 34 106-139 60-100 (152)
190 1ys7_A Transcriptional regulat 24.7 93 0.0032 24.5 4.8 31 106-136 50-87 (233)
191 1rw7_A YDR533CP; alpha-beta sa 24.6 1.5E+02 0.0053 24.0 6.2 41 1-41 1-52 (243)
192 3hdg_A Uncharacterized protein 24.6 89 0.003 22.0 4.3 33 106-138 50-89 (137)
193 1kgs_A DRRD, DNA binding respo 24.6 1.6E+02 0.0055 22.9 6.3 34 106-139 45-85 (225)
194 4e3z_A Putative oxidoreductase 24.5 95 0.0033 25.5 5.0 36 1-39 23-58 (272)
195 3eag_A UDP-N-acetylmuramate:L- 24.4 79 0.0027 27.1 4.6 32 4-39 5-36 (326)
196 3c6x_A Hydroxynitrilase; atomi 24.3 70 0.0024 25.8 4.0 38 1-39 1-38 (257)
197 3i6i_A Putative leucoanthocyan 24.2 82 0.0028 26.9 4.7 37 1-41 8-44 (346)
198 3r0j_A Possible two component 24.1 79 0.0027 25.5 4.3 34 106-139 66-106 (250)
199 3f67_A Putative dienelactone h 24.1 1.2E+02 0.004 23.6 5.3 34 6-39 34-67 (241)
200 3fwz_A Inner membrane protein 23.9 52 0.0018 24.1 2.9 33 4-41 8-40 (140)
201 3egr_A Phenylacetate-COA oxyge 23.8 26 0.00088 24.4 1.0 48 259-308 10-66 (96)
202 3hzh_A Chemotaxis response reg 23.8 85 0.0029 22.9 4.2 32 107-138 83-121 (157)
203 3tsa_A SPNG, NDP-rhamnosyltran 23.8 44 0.0015 29.1 2.8 35 258-292 207-244 (391)
204 3obb_A Probable 3-hydroxyisobu 23.7 58 0.002 27.7 3.5 31 5-40 5-35 (300)
205 3cmw_A Protein RECA, recombina 23.7 2E+02 0.0068 31.1 8.0 104 6-135 386-517 (1706)
206 3hyw_A Sulfide-quinone reducta 23.7 71 0.0024 28.5 4.2 35 1-41 1-37 (430)
207 3cfy_A Putative LUXO repressor 23.7 96 0.0033 22.0 4.4 33 106-138 47-86 (137)
208 2hy5_A Putative sulfurtransfer 23.6 56 0.0019 23.7 3.0 35 7-41 5-42 (130)
209 3sju_A Keto reductase; short-c 23.5 92 0.0031 25.8 4.7 34 4-40 24-57 (279)
210 3ouz_A Biotin carboxylase; str 23.4 3.9E+02 0.013 23.7 9.3 36 1-41 4-39 (446)
211 4ao6_A Esterase; hydrolase, th 23.4 63 0.0022 26.3 3.6 36 5-40 57-94 (259)
212 2vou_A 2,6-dihydroxypyridine h 23.3 1.2E+02 0.0041 26.4 5.7 33 2-39 4-36 (397)
213 1cp2_A CP2, nitrogenase iron p 23.3 64 0.0022 26.4 3.6 36 6-41 4-39 (269)
214 1g3q_A MIND ATPase, cell divis 23.2 70 0.0024 25.5 3.8 30 12-41 12-41 (237)
215 4e12_A Diketoreductase; oxidor 23.1 1E+02 0.0036 25.6 5.0 35 1-40 2-36 (283)
216 1hyq_A MIND, cell division inh 23.1 77 0.0026 25.8 4.1 31 11-41 11-41 (263)
217 2ixd_A LMBE-related protein; h 22.9 87 0.003 25.7 4.3 38 1-39 1-39 (242)
218 3bul_A Methionine synthase; tr 22.9 1.4E+02 0.0046 28.2 6.0 43 3-45 98-140 (579)
219 2vqe_B 30S ribosomal protein S 22.8 16 0.00056 30.5 -0.2 33 107-139 158-192 (256)
220 1e4e_A Vancomycin/teicoplanin 22.7 55 0.0019 28.2 3.2 39 1-40 1-44 (343)
221 3kcn_A Adenylate cyclase homol 22.7 1.4E+02 0.0047 21.5 5.1 33 107-139 48-87 (151)
222 3p9x_A Phosphoribosylglycinami 22.7 1.2E+02 0.0042 24.3 5.0 46 92-137 15-61 (211)
223 1xjc_A MOBB protein homolog; s 22.7 1.4E+02 0.0048 22.9 5.2 37 5-41 6-42 (169)
224 1vi6_A 30S ribosomal protein S 22.7 63 0.0022 26.0 3.2 31 107-137 115-147 (208)
225 1rcu_A Conserved hypothetical 22.4 1.4E+02 0.0049 23.6 5.3 33 4-36 24-63 (195)
226 2gkg_A Response regulator homo 22.2 1.2E+02 0.004 20.7 4.5 33 106-139 48-90 (127)
227 3oid_A Enoyl-[acyl-carrier-pro 22.1 1.1E+02 0.0037 25.0 4.8 36 1-39 1-36 (258)
228 3ug7_A Arsenical pump-driving 21.9 1.2E+02 0.004 26.4 5.2 38 5-42 27-65 (349)
229 4h62_V Mediator of RNA polymer 21.9 52 0.0018 16.8 1.6 16 277-292 3-19 (31)
230 1zh2_A KDP operon transcriptio 21.9 81 0.0028 21.4 3.5 34 106-139 44-83 (121)
231 1i3c_A Response regulator RCP1 21.9 93 0.0032 22.4 4.0 34 106-139 60-102 (149)
232 1a04_A Nitrate/nitrite respons 21.7 98 0.0033 24.1 4.3 34 106-139 50-90 (215)
233 1zi8_A Carboxymethylenebutenol 21.7 1.4E+02 0.0047 23.1 5.3 34 6-39 30-63 (236)
234 2qv0_A Protein MRKE; structura 21.7 1.4E+02 0.0048 21.1 4.9 22 106-127 54-77 (143)
235 1lgh_B LH II, B800/850, light 21.7 31 0.001 20.3 0.8 18 277-294 3-20 (45)
236 3goc_A Endonuclease V; alpha-b 21.6 1.1E+02 0.0037 25.2 4.4 43 91-137 95-144 (237)
237 3n53_A Response regulator rece 21.5 85 0.0029 22.2 3.7 32 106-137 45-85 (140)
238 3h5i_A Response regulator/sens 21.5 1.6E+02 0.0056 20.7 5.3 31 106-136 49-86 (140)
239 3cg4_A Response regulator rece 21.5 1.1E+02 0.0039 21.5 4.4 21 106-126 50-72 (142)
240 3s40_A Diacylglycerol kinase; 21.4 1.2E+02 0.0041 25.6 5.1 37 5-41 10-49 (304)
241 1mvo_A PHOP response regulator 21.2 1.1E+02 0.0039 21.3 4.3 32 106-137 46-84 (136)
242 4dll_A 2-hydroxy-3-oxopropiona 21.1 1.2E+02 0.0042 25.8 5.1 32 4-40 32-63 (320)
243 4ds3_A Phosphoribosylglycinami 21.0 1.3E+02 0.0045 24.1 4.9 45 92-136 20-65 (209)
244 2qjw_A Uncharacterized protein 20.9 1.3E+02 0.0044 22.0 4.7 38 1-38 2-40 (176)
245 3f6c_A Positive transcription 20.9 1.1E+02 0.0036 21.4 4.1 32 106-137 45-83 (134)
246 3oz2_A Digeranylgeranylglycero 20.9 51 0.0017 28.4 2.6 19 20-38 16-34 (397)
247 2j48_A Two-component sensor ki 20.8 1.3E+02 0.0045 19.9 4.5 32 106-137 44-84 (119)
248 2ayx_A Sensor kinase protein R 20.8 87 0.003 25.5 3.9 33 106-138 172-211 (254)
249 4hb9_A Similarities with proba 20.8 59 0.002 28.3 3.1 29 4-37 2-30 (412)
250 2afh_E Nitrogenase iron protei 20.7 80 0.0027 26.3 3.7 36 6-41 5-40 (289)
251 3dqp_A Oxidoreductase YLBE; al 20.6 59 0.002 25.6 2.8 21 20-40 13-33 (219)
252 3osu_A 3-oxoacyl-[acyl-carrier 20.4 1.5E+02 0.0051 23.8 5.3 36 1-39 1-36 (246)
253 2xci_A KDO-transferase, 3-deox 20.4 3.8E+02 0.013 23.1 8.3 33 8-41 44-76 (374)
254 3c3w_A Two component transcrip 20.2 69 0.0024 25.4 3.1 33 106-138 46-85 (225)
255 3ius_A Uncharacterized conserv 20.2 1.6E+02 0.0054 24.1 5.5 33 4-41 6-38 (286)
256 3ged_A Short-chain dehydrogena 20.2 3.6E+02 0.012 22.0 9.7 34 1-39 1-34 (247)
257 3heb_A Response regulator rece 20.2 1.5E+02 0.0051 21.2 4.9 34 106-139 58-100 (152)
258 3pnx_A Putative sulfurtransfer 20.1 2.1E+02 0.007 21.8 5.6 46 1-46 2-48 (160)
259 2ehd_A Oxidoreductase, oxidore 20.1 72 0.0025 25.4 3.2 22 19-40 17-38 (234)
260 2b69_A UDP-glucuronate decarbo 20.1 1E+02 0.0035 26.2 4.4 33 3-39 27-59 (343)
261 2dkn_A 3-alpha-hydroxysteroid 20.0 72 0.0025 25.6 3.2 21 19-39 13-33 (255)
262 2d1p_A TUSD, hypothetical UPF0 20.0 1.8E+02 0.0063 21.5 5.2 36 6-41 16-54 (140)
263 3o26_A Salutaridine reductase; 20.0 1.2E+02 0.0042 25.1 4.8 34 4-40 12-45 (311)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1e-46 Score=351.89 Aligned_cols=286 Identities=20% Similarity=0.329 Sum_probs=213.8
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCC--CEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCCC-CCCCHH
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWE-DRNDFG 79 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rG--h~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~-~~~~~~ 79 (322)
+.||+++|+|++||++||++|||+|++|| +.|||++|..+..++.... ....++|+|+.+|++++.+. ...+..
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~---~~~~~~i~~~~ipdglp~~~~~~~~~~ 89 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS---NEFLPNIKYYNVHDGLPKGYVSSGNPR 89 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSS---SCCCTTEEEEECCCCCCTTCCCCSCTT
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccc---ccCCCCceEEecCCCCCCCccccCChH
Confidence 67999999999999999999999999999 9999999976655442211 01124799999999988763 222322
Q ss_pred HHHHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHHhhhhhhhc-CCcC
Q 044384 80 KLIEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGGVFWSSSAASVALVFRIPKLIDD-GIID 158 (322)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~~-g~~~ 158 (322)
..+..+.+.+.+.+++.++++..+...++||||+|+|++|+.++|+++|||++.||+++++.++.+.+++.+... +...
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~ 169 (454)
T 3hbf_A 90 EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKE 169 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCc
Confidence 333333333444555555554221115799999999999999999999999999999999999988877765433 1111
Q ss_pred CCCCCCCccccccCCCCCCCCccccccccccCCchhhHHHHHHHHHHHhccCCCEEEEcCchhccHHHHhh----CCCce
Q 044384 159 SHGTPMSMQMFLIAPNMPEMNSRDCFWAHIGDLTTQKIFFDLLDRNTRAMRAVNFHFCNSTYELESEAFTM----FPELL 234 (322)
Q Consensus 159 ~~~~~~~~~~~~~vP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ns~~~le~~~~~~----~p~v~ 234 (322)
. ..+..+..+||++.++.+++| .+... +......+++.+..+..++++++++|||++||+++.+. +|+++
T Consensus 170 ---~-~~~~~~~~iPg~p~~~~~dlp-~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~ 243 (454)
T 3hbf_A 170 ---V-HDVKSIDVLPGFPELKASDLP-EGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLL 243 (454)
T ss_dssp ---H-TTSSCBCCSTTSCCBCGGGSC-TTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEE
T ss_pred ---c-ccccccccCCCCCCcChhhCc-hhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEE
Confidence 0 112234469999999999999 44432 22334556666777788899999999999999986443 57999
Q ss_pred eeccCCCCCCCCCCCCCCCcCCCccccccCCCCCCcEEEEecCCcccCCHHHHHHHHHcc-------eeeecCCC
Q 044384 235 PIGPLTASNRQGNSAGYFWREDSNCLKWLDQQQPSSVIYAAFGSLTILDQVQFQEFVDAR-------FWLRLPTT 302 (322)
Q Consensus 235 ~VGpl~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIYvSfGS~~~l~~~q~~ela~~l-------lWv~r~~~ 302 (322)
+|||++...... ....+++|++|||+|++++||||||||+..++.+|+++++.|| ||++|++.
T Consensus 244 ~vGPl~~~~~~~-----~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~ 313 (454)
T 3hbf_A 244 NVGPFNLTTPQR-----KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP 313 (454)
T ss_dssp ECCCHHHHSCCS-----CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH
T ss_pred EECCcccccccc-----cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc
Confidence 999998643221 0124578999999998999999999999999999999999999 99999853
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=8.9e-42 Score=323.27 Aligned_cols=301 Identities=28% Similarity=0.531 Sum_probs=209.8
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCC-CCCCCeEEEecCCCCCCCC----CC
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKN-YLEEQIRLVSIPDGMEPWE----DR 75 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~-~~~~~i~~~~i~~~~~~~~----~~ 75 (322)
|+++||+++|+|++||++||++||++|++|||+|||+++..+...+.+...... ...++++++.+|++++... ..
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 346799999999999999999999999999999999999876554432210000 0013799999998776521 12
Q ss_pred CCHHHHHHHHHHHchHHHHHHHHHHhccC-CCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHHhhhhhhhc
Q 044384 76 NDFGKLIEKFLQVMPRKLEELIEEINSRE-DEKIDCFIADGNMGWSLEVAKKMNVRGGVFWSSSAASVALVFRIPKLIDD 154 (322)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~~ 154 (322)
.+...++..+...+.+.++++++++..+. ..++||||+|.++.|+..+|+++|||++.++++++.....+.+++.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 34444555544567888999998875320 15799999999999999999999999999999999887776556655555
Q ss_pred CCcCCCCC--CCC---ccccccCCCCCCCCccccccccccCCchhhHHHHHHHHHHHhccCCCEEEEcCchhccHHHH--
Q 044384 155 GIIDSHGT--PMS---MQMFLIAPNMPEMNSRDCFWAHIGDLTTQKIFFDLLDRNTRAMRAVNFHFCNSTYELESEAF-- 227 (322)
Q Consensus 155 g~~~~~~~--~~~---~~~~~~vP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ns~~~le~~~~-- 227 (322)
|+.|.... ... +.....+||++.++..+++ .+....+......+++.+..+..++++++|+||+++||+++.
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~ 244 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINA 244 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHH
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCc-hhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHH
Confidence 66552110 000 1122357888777777887 444332222334455555666778899999999999999753
Q ss_pred --hhCCCceeeccCCCC-CCCC-----CCC-CCCCcCCCccccccCCCCCCcEEEEecCCcccCCHHHHHHHHHcc----
Q 044384 228 --TMFPELLPIGPLTAS-NRQG-----NSA-GYFWREDSNCLKWLDQQQPSSVIYAAFGSLTILDQVQFQEFVDAR---- 294 (322)
Q Consensus 228 --~~~p~v~~VGpl~~~-~~~~-----~~~-~~~~~~~~~~~~wLd~~~~~sVIYvSfGS~~~l~~~q~~ela~~l---- 294 (322)
+.+|++++|||++.. +... +.. ...++.+.+|.+|||++++++||||||||...++.+|+++++.+|
T Consensus 245 ~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 324 (482)
T 2pq6_A 245 LSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCK 324 (482)
T ss_dssp HHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 334789999999863 1110 000 112224457999999998899999999999999999999999999
Q ss_pred ---eeeecCCC
Q 044384 295 ---FWLRLPTT 302 (322)
Q Consensus 295 ---lWv~r~~~ 302 (322)
||+++++.
T Consensus 325 ~~~l~~~~~~~ 335 (482)
T 2pq6_A 325 KSFLWIIRPDL 335 (482)
T ss_dssp CEEEEECCGGG
T ss_pred CcEEEEEcCCc
Confidence 99999754
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1e-37 Score=294.86 Aligned_cols=284 Identities=25% Similarity=0.388 Sum_probs=200.0
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhC-CCEEEEEeCccc--hhhHHhhhccCCCCCCCeEEEecCCCC-CCCCCCCCH
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYY--HKRVVESLQGKNYLEEQIRLVSIPDGM-EPWEDRNDF 78 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~r-Gh~VT~it~~~~--~~~~~~~~~~~~~~~~~i~~~~i~~~~-~~~~~~~~~ 78 (322)
++||+++|+|++||++||++|+++|++| ||+||++++..+ ...+.... .....+++|+.+|+.. +......+.
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~---~~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVL---DSLPSSISSVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHH---C-CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhc---cccCCCceEEEcCCCCCCCCCCchhH
Confidence 4799999999999999999999999998 999999999863 22222210 0002479999998652 211111233
Q ss_pred HHHHHHHHHHchHHHHHHHHHHhccCCCCc-cEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHHhhhhhhhcCCc
Q 044384 79 GKLIEKFLQVMPRKLEELIEEINSREDEKI-DCFIADGNMGWSLEVAKKMNVRGGVFWSSSAASVALVFRIPKLIDDGII 157 (322)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-d~vI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~~g~~ 157 (322)
...+......+.+.++++++++.. . .++ ||||+|.++.|+..+|+++|||++.++++++.....+.++|.+...+..
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~-~-~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVE-G-GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHH-T-TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhhhHHHHHHHHHhcc-C-CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 332323334567788888887632 1 468 9999999999999999999999999999999888777666654432221
Q ss_pred CCCCCCCCccccccCCCCCCCCccccccccccCCchhhHHHHHHHHHHHhccCCCEEEEcCchhccHHHHhh-------C
Q 044384 158 DSHGTPMSMQMFLIAPNMPEMNSRDCFWAHIGDLTTQKIFFDLLDRNTRAMRAVNFHFCNSTYELESEAFTM-------F 230 (322)
Q Consensus 158 ~~~~~~~~~~~~~~vP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ns~~~le~~~~~~-------~ 230 (322)
+ +...+. ...+||+++++..+++. ...... ...++.+.+.....++++++++||+++||+.+... .
T Consensus 161 ~---~~~~~~-~~~~Pg~~p~~~~~l~~-~~~~~~--~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~ 233 (480)
T 2vch_A 161 E---FRELTE-PLMLPGCVPVAGKDFLD-PAQDRK--DDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDK 233 (480)
T ss_dssp C---GGGCSS-CBCCTTCCCBCGGGSCG-GGSCTT--SHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTC
T ss_pred c---ccccCC-cccCCCCCCCChHHCch-hhhcCC--chHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCC
Confidence 1 100011 22578888777777773 332211 12333444455567788999999999999876542 3
Q ss_pred CCceeeccCCCCCCCCCCCCCCCcCCCccccccCCCCCCcEEEEecCCcccCCHHHHHHHHHcc-------eeeecCCC
Q 044384 231 PELLPIGPLTASNRQGNSAGYFWREDSNCLKWLDQQQPSSVIYAAFGSLTILDQVQFQEFVDAR-------FWLRLPTT 302 (322)
Q Consensus 231 p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIYvSfGS~~~l~~~q~~ela~~l-------lWv~r~~~ 302 (322)
|++++|||++....... .++++++|.+|||+|++++||||||||+..++.+|+++++.|| ||++|.+.
T Consensus 234 ~~v~~vGpl~~~~~~~~----~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~ 308 (480)
T 2vch_A 234 PPVYPVGPLVNIGKQEA----KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPS 308 (480)
T ss_dssp CCEEECCCCCCCSCSCC---------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred CcEEEEecccccccccc----CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcc
Confidence 68999999987432110 0135678999999998899999999999999999999999999 99999864
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=6.9e-38 Score=294.25 Aligned_cols=291 Identities=21% Similarity=0.336 Sum_probs=195.2
Q ss_pred CCCeEEEEcCCCCcChHHHHHHHHHHHhCC--CEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCCC-CCCCH
Q 044384 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWE-DRNDF 78 (322)
Q Consensus 2 ~~~hv~~~p~p~~gH~~p~~~la~~La~rG--h~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~-~~~~~ 78 (322)
++.||+++|+|++||++||++||++|++|| +.||++++..+..++.... ......+|+++.++++++... ...+.
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~--~~~~~~~i~~~~i~~glp~~~~~~~~~ 83 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDS--MHTMQCNIKSYDISDGVPEGYVFAGRP 83 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTCCCCCCT
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccc--cccCCCceEEEeCCCCCCCcccccCCh
Confidence 457999999999999999999999999986 5568888865444332210 000124799999998877642 11122
Q ss_pred HHHHHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHHhhhhhhhc-CCc
Q 044384 79 GKLIEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGGVFWSSSAASVALVFRIPKLIDD-GII 157 (322)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~~-g~~ 157 (322)
...+..+.+.+.+.++++++++..+...++||||+|.++.|+..+|+++|||+|.++++++..+..+.+.+.+... |..
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (456)
T 2c1x_A 84 QEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVS 163 (456)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSS
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCc
Confidence 2223333333344555666544321015799999999999999999999999999999998877765544432211 321
Q ss_pred CCCCCCCCccccccCCCCCCCCccccccccccCCchhhHHHHHHHHHHHhccCCCEEEEcCchhccHHHH----hhCCCc
Q 044384 158 DSHGTPMSMQMFLIAPNMPEMNSRDCFWAHIGDLTTQKIFFDLLDRNTRAMRAVNFHFCNSTYELESEAF----TMFPEL 233 (322)
Q Consensus 158 ~~~~~~~~~~~~~~vP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ns~~~le~~~~----~~~p~v 233 (322)
+. ....++...++||++.++..++| .............+++.+..+..++++++++||+++||+++. +.+|++
T Consensus 164 ~~--~~~~~~~~~~~pg~~~~~~~~lp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~ 240 (456)
T 2c1x_A 164 GI--QGREDELLNFIPGMSKVRFRDLQ-EGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTY 240 (456)
T ss_dssp CC--TTCTTCBCTTSTTCTTCBGGGSC-TTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCE
T ss_pred cc--ccccccccccCCCCCcccHHhCc-hhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCE
Confidence 10 00112234468999888888888 332221112223344444555667899999999999999743 345899
Q ss_pred eeeccCCCCCCCCCCCCCCCcCCCccccccCCCCCCcEEEEecCCcccCCHHHHHHHHHcc-------eeeecCCC
Q 044384 234 LPIGPLTASNRQGNSAGYFWREDSNCLKWLDQQQPSSVIYAAFGSLTILDQVQFQEFVDAR-------FWLRLPTT 302 (322)
Q Consensus 234 ~~VGpl~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIYvSfGS~~~l~~~q~~ela~~l-------lWv~r~~~ 302 (322)
++|||++....... ++.+.+|.+|||++++++||||||||...++.+++++++.|| ||+++++.
T Consensus 241 ~~vGpl~~~~~~~~-----~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~ 311 (456)
T 2c1x_A 241 LNIGPFNLITPPPV-----VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA 311 (456)
T ss_dssp EECCCHHHHC--------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG
T ss_pred EEecCcccCccccc-----ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc
Confidence 99999986332110 113457999999988899999999999988999999999998 99998753
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=8.8e-38 Score=294.17 Aligned_cols=286 Identities=20% Similarity=0.263 Sum_probs=199.4
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCccchhh-HHhhhccCCCCCCCeEEEecCCC-CCCCCCCCCH
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYYHKR-VVESLQGKNYLEEQIRLVSIPDG-MEPWEDRNDF 78 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~r--Gh~VT~it~~~~~~~-~~~~~~~~~~~~~~i~~~~i~~~-~~~~~~~~~~ 78 (322)
++||+++|+|++||++||++||++|++| ||+|||+++..+... +.....+......+++|+.+|++ ++..+.....
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~~ 88 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQELLKSP 88 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGGGGSH
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcccccCCc
Confidence 5799999999999999999999999999 999999999865311 11111000011247999999976 3321111111
Q ss_pred HHHHHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHHhhhhhhhcCCcC
Q 044384 79 GKLIEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGGVFWSSSAASVALVFRIPKLIDDGIID 158 (322)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~~g~~~ 158 (322)
...+......+.+.++++++++ . + .++||||+|.++.|+..+|+++|||+++++++++..+..+.+++.+...+ +
T Consensus 89 ~~~~~~~~~~~~~~~~~ll~~~-~-~-~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~--~ 163 (463)
T 2acv_A 89 EFYILTFLESLIPHVKATIKTI-L-S-NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEE--V 163 (463)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHH-C-C-TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTC--C
T ss_pred cHHHHHHHHhhhHHHHHHHHhc-c-C-CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccC--C
Confidence 1112222345677888888876 1 2 57999999999999999999999999999999998887776666432111 1
Q ss_pred CCCCCCCcc--ccccCCCC-CCCCccccccccccCCchhhHHHHHHHHHHHhccCCCEEEEcCchhccHHHHhh------
Q 044384 159 SHGTPMSMQ--MFLIAPNM-PEMNSRDCFWAHIGDLTTQKIFFDLLDRNTRAMRAVNFHFCNSTYELESEAFTM------ 229 (322)
Q Consensus 159 ~~~~~~~~~--~~~~vP~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ns~~~le~~~~~~------ 229 (322)
+...+. ....+||+ ++++..+++..+. .. ...+..+.+.....++++++++||+++||+++.+.
T Consensus 164 ---~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~-~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~ 236 (463)
T 2acv_A 164 ---FDDSDRDHQLLNIPGISNQVPSNVLPDACF-NK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDE 236 (463)
T ss_dssp ---CCCSSGGGCEECCTTCSSCEEGGGSCHHHH-CT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCT
T ss_pred ---CCCccccCceeECCCCCCCCChHHCchhhc-CC---chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccc
Confidence 111111 03368998 7777777773222 11 11333444455567788999999999999986543
Q ss_pred -CCCceeeccCCCCCCCCCCCCCCCcCCCccccccCCCCCCcEEEEecCCcc-cCCHHHHHHHHHcc-------eeeecC
Q 044384 230 -FPELLPIGPLTASNRQGNSAGYFWREDSNCLKWLDQQQPSSVIYAAFGSLT-ILDQVQFQEFVDAR-------FWLRLP 300 (322)
Q Consensus 230 -~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIYvSfGS~~-~l~~~q~~ela~~l-------lWv~r~ 300 (322)
.|+++.|||++........ ...+.++.+|.+|||++++++||||||||+. .++.+|+++++.+| ||++++
T Consensus 237 p~~~v~~vGpl~~~~~~~~~-~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 315 (463)
T 2acv_A 237 KIPPIYAVGPLLDLKGQPNP-KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSA 315 (463)
T ss_dssp TSCCEEECCCCCCSSCCCBT-TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCC
T ss_pred cCCcEEEeCCCccccccccc-ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECC
Confidence 4689999999864320100 0001245689999999988999999999999 89999999999999 999997
Q ss_pred C
Q 044384 301 T 301 (322)
Q Consensus 301 ~ 301 (322)
+
T Consensus 316 ~ 316 (463)
T 2acv_A 316 E 316 (463)
T ss_dssp C
T ss_pred C
Confidence 4
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.91 E-value=6.8e-23 Score=190.62 Aligned_cols=263 Identities=17% Similarity=0.128 Sum_probs=154.6
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCCC-C----C
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWE-D----R 75 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~-~----~ 75 (322)
|.++||+++|++++||++|+++|+++|++|||+||++++......+.. .+++++.++..++... . .
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA---------AGATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------HTCEEEECCCCSCCTTCTTCCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEecCccccccccchhhcc
Confidence 566799999999999999999999999999999999999876654433 2688888886554321 1 1
Q ss_pred CCHHHHHHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHHhhhhhhhcC
Q 044384 76 NDFGKLIEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGGVFWSSSAASVALVFRIPKLIDDG 155 (322)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~~g 155 (322)
.+....+..+.+.......++.+.+.. .++||||+|.+..|+..+|+++|||++.+++..+.........+. ...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~-~~~~ 156 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYAD---DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPA-VQDP 156 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTT---SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGG-GSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccc-cccc
Confidence 233333322222222223333333322 579999999988899999999999999998776421111000000 0001
Q ss_pred CcCCCCCCCCccccccCCC-CCC-CC-ccccccccccCCchhhHHHHHHHH------HHHhccCCCEEEEcCchhccHHH
Q 044384 156 IIDSHGTPMSMQMFLIAPN-MPE-MN-SRDCFWAHIGDLTTQKIFFDLLDR------NTRAMRAVNFHFCNSTYELESEA 226 (322)
Q Consensus 156 ~~~~~~~~~~~~~~~~vP~-~~~-~~-~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~vl~Ns~~~le~~~ 226 (322)
... ..... ..|. ... .. ....+ .+. .....+.+++.+ ........+.+++|+..+++++.
T Consensus 157 ~~~------~~~~~-~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~ 225 (424)
T 2iya_A 157 TAD------RGEEA-AAPAGTGDAEEGAEAED-GLV---RFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG 225 (424)
T ss_dssp CC----------------------------HH-HHH---HHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG
T ss_pred ccc------ccccc-ccccccccchhhhccch-hHH---HHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc
Confidence 000 00000 0000 000 00 00000 000 000001111110 00111246789999999999864
Q ss_pred HhhCCCceeeccCCCCCCCCCCCCCCCcCCCccccccCCCCCCcEEEEecCCcccCCHHHHHHHHHcc-------eeeec
Q 044384 227 FTMFPELLPIGPLTASNRQGNSAGYFWREDSNCLKWLDQQQPSSVIYAAFGSLTILDQVQFQEFVDAR-------FWLRL 299 (322)
Q Consensus 227 ~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIYvSfGS~~~l~~~q~~ela~~l-------lWv~r 299 (322)
.+..++++.|||+..... +..+|++.++++++|||+|||......+++.+++.+| +|++.
T Consensus 226 ~~~~~~~~~vGp~~~~~~-------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g 292 (424)
T 2iya_A 226 DTVGDNYTFVGPTYGDRS-------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVG 292 (424)
T ss_dssp GGCCTTEEECCCCCCCCG-------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECC
T ss_pred cCCCCCEEEeCCCCCCcc-------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEEC
Confidence 334468999999764111 1347888777789999999999877888999999887 57664
Q ss_pred C
Q 044384 300 P 300 (322)
Q Consensus 300 ~ 300 (322)
+
T Consensus 293 ~ 293 (424)
T 2iya_A 293 R 293 (424)
T ss_dssp T
T ss_pred C
Confidence 4
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.85 E-value=7.2e-21 Score=176.58 Aligned_cols=252 Identities=13% Similarity=0.120 Sum_probs=143.6
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCC-CC-CCCHHHH
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPW-ED-RNDFGKL 81 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~-~~-~~~~~~~ 81 (322)
+||++++.++.||++|+++|+++|++|||+||++++......+.. .+++++.++...... .. .......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~---------~g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE---------VGVPHVPVGPSARAPIQRAKPLTAED 71 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEECCC-------CCSCCCHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH---------cCCeeeeCCCCHHHHhhcccccchHH
Confidence 479999999999999999999999999999999999875544432 368888887543211 01 1111111
Q ss_pred HHHHHHHchHHHHHHHHHHhccCCCCccEEEecC-Ccch--HHHHHHHcCCceEEEccchHHHHHHHHhhhhhhhcCCcC
Q 044384 82 IEKFLQVMPRKLEELIEEINSREDEKIDCFIADG-NMGW--SLEVAKKMNVRGGVFWSSSAASVALVFRIPKLIDDGIID 158 (322)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~-~~~~--~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~~g~~~ 158 (322)
+.. .+.....++++++.... .+|||||+|. +..| +..+|+++|||.+.++++++.... .+.|
T Consensus 72 ~~~---~~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-----------~~~p 136 (415)
T 1iir_A 72 VRR---FTTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------PYYP 136 (415)
T ss_dssp HHH---HHHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSC
T ss_pred HHH---HHHHHHHHHHHHHHHHh-cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------cccC
Confidence 111 11222233333332111 5799999998 5678 889999999999999877643210 1111
Q ss_pred CCCCCCCccccccCCCCCCCCccccccccccCCchhhHHHHHHHHHH------------HhccCCCEEEEcCchhccH-H
Q 044384 159 SHGTPMSMQMFLIAPNMPEMNSRDCFWAHIGDLTTQKIFFDLLDRNT------------RAMRAVNFHFCNSTYELES-E 225 (322)
Q Consensus 159 ~~~~~~~~~~~~~vP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~vl~Ns~~~le~-~ 225 (322)
.. . ... .+|+ ......+...+.. ..........+.... +..... .+++|+++++++ +
T Consensus 137 ~~---~--~~~-~~~~--~~~~n~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~ 206 (415)
T 1iir_A 137 PP---P--LGE-PSTQ--DTIDIPAQWERNN-QSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ 206 (415)
T ss_dssp CC---C--------------CHHHHHHHHHH-HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC
T ss_pred Cc---c--CCc-cccc--hHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC
Confidence 00 0 000 0110 0000001000000 000000000000011 011122 689999999987 4
Q ss_pred HHhhCCCceeeccCCCCCCCCCCCCCCCcCCCccccccCCCCCCcEEEEecCCcccCCHHHHHHHHHcc-------eeee
Q 044384 226 AFTMFPELLPIGPLTASNRQGNSAGYFWREDSNCLKWLDQQQPSSVIYAAFGSLTILDQVQFQEFVDAR-------FWLR 298 (322)
Q Consensus 226 ~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIYvSfGS~~~l~~~q~~ela~~l-------lWv~ 298 (322)
. ... +++.|||++..... +.+.+|.+|||++ +++|||||||.. .+.+.+++++.+| +|+.
T Consensus 207 ~-~~~-~~~~vG~~~~~~~~--------~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~ 273 (415)
T 1iir_A 207 P-TDL-DAVQTGAWILPDER--------PLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSR 273 (415)
T ss_dssp C-CSS-CCEECCCCCCCCCC--------CCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECT
T ss_pred c-ccC-CeEeeCCCccCccc--------CCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEe
Confidence 2 222 89999999864321 2567899999875 379999999987 6788888888887 8888
Q ss_pred cCCC
Q 044384 299 LPTT 302 (322)
Q Consensus 299 r~~~ 302 (322)
+...
T Consensus 274 g~~~ 277 (415)
T 1iir_A 274 GWAD 277 (415)
T ss_dssp TCTT
T ss_pred CCCc
Confidence 7643
No 8
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.81 E-value=1.3e-19 Score=168.09 Aligned_cols=253 Identities=12% Similarity=0.005 Sum_probs=145.7
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCCCC---CCCHHH
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWED---RNDFGK 80 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~---~~~~~~ 80 (322)
+||++++.++.||++|+++|+++|++|||+||++++....+.+.. .+++++.++........ ......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE---------VGVPHVPVGLPQHMMLQEGMPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------HTCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH---------cCCeeeecCCCHHHHHhhccccchhH
Confidence 479999999999999999999999999999999999765544433 25788887754211100 011111
Q ss_pred HHHHHHHHchHHHHHHHHHHhccCCCCccEEEecCC-cch--HHHHHHHcCCceEEEccchHHHHHHHHhhhhhhhcCCc
Q 044384 81 LIEKFLQVMPRKLEELIEEINSREDEKIDCFIADGN-MGW--SLEVAKKMNVRGGVFWSSSAASVALVFRIPKLIDDGII 157 (322)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~-~~~--~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~~g~~ 157 (322)
.+..+ ......++++.+.... .+|||||+|.+ ..| +..+|+++|||.+.+++++..... ...
T Consensus 72 ~~~~~---~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~-----------~~~ 136 (416)
T 1rrv_A 72 EEQRL---AAMTVEMQFDAVPGAA-EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS-----------PHL 136 (416)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHT-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSS
T ss_pred HHHHH---HHHHHHHHHHHHHHHh-cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-----------ccc
Confidence 11111 1112233333332111 57999999975 456 788999999999988776532100 000
Q ss_pred CCCCCCCCccccccCCCCCCCCcccccccccc-C-CchhhHHHHHHHHH---------HHhccCCCEEEEcCchhccHHH
Q 044384 158 DSHGTPMSMQMFLIAPNMPEMNSRDCFWAHIG-D-LTTQKIFFDLLDRN---------TRAMRAVNFHFCNSTYELESEA 226 (322)
Q Consensus 158 ~~~~~~~~~~~~~~vP~~~~~~~~~l~~~~~~-~-~~~~~~~~~~~~~~---------~~~~~~~~~vl~Ns~~~le~~~ 226 (322)
| . .. .....++. . ...+...+.. . ........+.+.+. .+...+. .+++|++++++++.
T Consensus 137 p-~---~~--~~~~~~~r--~-~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~ 206 (416)
T 1rrv_A 137 P-P---AY--DEPTTPGV--T-DIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQ 206 (416)
T ss_dssp C-C---CB--CSCCCTTC--C-CHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCCC
T ss_pred C-C---CC--CCCCCchH--H-HHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCCC
Confidence 0 0 00 00000110 0 0000000000 0 00000000000000 1111233 68999999998752
Q ss_pred HhhCCCceeeccCCCCCCCCCCCCCCCcCCCccccccCCCCCCcEEEEecCCccc-CCHHHHHHHHHcc-------eeee
Q 044384 227 FTMFPELLPIGPLTASNRQGNSAGYFWREDSNCLKWLDQQQPSSVIYAAFGSLTI-LDQVQFQEFVDAR-------FWLR 298 (322)
Q Consensus 227 ~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIYvSfGS~~~-l~~~q~~ela~~l-------lWv~ 298 (322)
. .. +++.|||++.+... +.+.+|.+|||++ +++|||||||... .+.+++++++.+| +|+.
T Consensus 207 ~-~~-~~~~vG~~~~~~~~--------~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~ 274 (416)
T 1rrv_A 207 P-DV-DAVQTGAWLLSDER--------PLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSR 274 (416)
T ss_dssp S-SC-CCEECCCCCCCCCC--------CCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred C-CC-CeeeECCCccCccC--------CCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEe
Confidence 1 22 89999999874321 2567899999875 3799999999863 5678888888887 8887
Q ss_pred cCCC
Q 044384 299 LPTT 302 (322)
Q Consensus 299 r~~~ 302 (322)
+...
T Consensus 275 g~~~ 278 (416)
T 1rrv_A 275 GWTE 278 (416)
T ss_dssp TTTT
T ss_pred CCcc
Confidence 7653
No 9
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.77 E-value=5.6e-18 Score=155.84 Aligned_cols=122 Identities=16% Similarity=0.183 Sum_probs=79.3
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCC-------C--
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPW-------E-- 73 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~-------~-- 73 (322)
.++|+++|+|++||++|+++||++|++|||+||++|+....... . .++.++.+....... .
T Consensus 22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~---------~g~~~~~~~~~~~~~~~~~~~~~~~ 91 (400)
T 4amg_A 22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-E---------AGLCAVDVSPGVNYAKLFVPDDTDV 91 (400)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-T---------TTCEEEESSTTCCSHHHHSCCC---
T ss_pred CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-h---------cCCeeEecCCchhHhhhcccccccc
Confidence 56899999999999999999999999999999999987654322 1 245555554322110 0
Q ss_pred --C----CCCHHHHHHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcchHHHHHHHcCCceEEEccc
Q 044384 74 --D----RNDFGKLIEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGGVFWSS 137 (322)
Q Consensus 74 --~----~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~~ 137 (322)
. ..........+.......+.++++.+.. .+||+||+|.+..|+..+|+++|+|.+.+...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~ 158 (400)
T 4amg_A 92 TDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS---WRPDLVVHTPTQGAGPLTAAALQLPCVELPLG 158 (400)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHTTCCEEECCSS
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECcchHHHHHHHHHcCCCceeeccc
Confidence 0 0011111111111122223333333222 46999999999999999999999999877544
No 10
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.77 E-value=4.1e-17 Score=151.68 Aligned_cols=241 Identities=17% Similarity=0.117 Sum_probs=139.3
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCCC-C----C
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWE-D----R 75 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~-~----~ 75 (322)
|+++||++++.++.||++|+++|+++|+++||+||++++......+.. .+++++.++...+... . .
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~ 75 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA---------TGPRPVLYHSTLPGPDADPEAWG 75 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TSCEEEECCCCSCCTTSCGGGGC
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEEcCCcCccccccccccc
Confidence 445699999999999999999999999999999999998765443322 3688888876433221 1 1
Q ss_pred CCHHHHHHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHHhhhhhhhcC
Q 044384 76 NDFGKLIEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGGVFWSSSAASVALVFRIPKLIDDG 155 (322)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~~g 155 (322)
.+....+..+...+...+.++.+.+.. .+||+||+|.+..|+..+|+++|+|.+.+++......... ..+ ..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~-~~~---~~~ 148 (430)
T 2iyf_A 76 STLLDNVEPFLNDAIQALPQLADAYAD---DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYE-EEV---AEP 148 (430)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHH-HHT---HHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccc-ccc---ccc
Confidence 233222222222122223333333322 5799999998877888999999999999886543110000 000 000
Q ss_pred CcCCCCCCCCccccccCCCCCCCCccccccccccCCchhhHHHHHHHH------HHHhccCCCEEEEcCchhccHHHHhh
Q 044384 156 IIDSHGTPMSMQMFLIAPNMPEMNSRDCFWAHIGDLTTQKIFFDLLDR------NTRAMRAVNFHFCNSTYELESEAFTM 229 (322)
Q Consensus 156 ~~~~~~~~~~~~~~~~vP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~vl~Ns~~~le~~~~~~ 229 (322)
..+ .....|+ .. .+ .....+.+.+ .......++.+++|+..+++......
T Consensus 149 ~~~---------~~~~~~~--------~~-~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 204 (430)
T 2iyf_A 149 MWR---------EPRQTER--------GR-AY------YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRV 204 (430)
T ss_dssp HHH---------HHHHSHH--------HH-HH------HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGS
T ss_pred hhh---------hhccchH--------HH-HH------HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccC
Confidence 000 0000000 00 00 0000111110 00111246789999999998753223
Q ss_pred CCC-ceeeccCCCCCCCCCCCCCCCcCCCccccccCCCCCCcEEEEecCCcccCCHHHHHHHHHcc
Q 044384 230 FPE-LLPIGPLTASNRQGNSAGYFWREDSNCLKWLDQQQPSSVIYAAFGSLTILDQVQFQEFVDAR 294 (322)
Q Consensus 230 ~p~-v~~VGpl~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIYvSfGS~~~l~~~q~~ela~~l 294 (322)
.++ ++.|||...... +..+|++.++++.+||+++||......+++.+++.+|
T Consensus 205 ~~~~v~~vG~~~~~~~-------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l 257 (430)
T 2iyf_A 205 DEDVYTFVGACQGDRA-------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAF 257 (430)
T ss_dssp CTTTEEECCCCC------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHH
T ss_pred CCccEEEeCCcCCCCC-------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHH
Confidence 357 999998653211 1235776656678999999999866778888888776
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.72 E-value=8.9e-16 Score=141.02 Aligned_cols=241 Identities=17% Similarity=0.199 Sum_probs=137.7
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCCC-----CC
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWE-----DR 75 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~-----~~ 75 (322)
|.++||++++.++.||++|++.|+++|++|||+||++++....+.+.. .+++++.++...+... ..
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~ 72 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA---------AGAEVVLYKSEFDTFHVPEVVKQ 72 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH---------TTCEEEECCCGGGTSSSSSSSCC
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH---------cCCEEEecccccccccccccccc
Confidence 666799999999999999999999999999999999998765554433 3688888774332211 11
Q ss_pred CCHHHHHHH-HHHHchHHHHHHHHHHhccCCCCccEEEec-CCcchHHHHHHHcCCceEEEccchHHHHHHHHhhhhhhh
Q 044384 76 NDFGKLIEK-FLQVMPRKLEELIEEINSREDEKIDCFIAD-GNMGWSLEVAKKMNVRGGVFWSSSAASVALVFRIPKLID 153 (322)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D-~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~ 153 (322)
.+....+.. +.......+.++.+.+.. .+||+||+| .+..++..+|+++|+|.+.+.+....... +...+.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~~ 148 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGD---NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKELWK 148 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-ccccccccc
Confidence 222222222 222222233344444332 679999999 77788889999999999987643321100 000000000
Q ss_pred cCCcCCCCCCCCccccccCCCCCCCCccccccccccCCchhhHHHHHHHH------HHHhccCC-CEEEEcCchhccHHH
Q 044384 154 DGIIDSHGTPMSMQMFLIAPNMPEMNSRDCFWAHIGDLTTQKIFFDLLDR------NTRAMRAV-NFHFCNSTYELESEA 226 (322)
Q Consensus 154 ~g~~~~~~~~~~~~~~~~vP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~vl~Ns~~~le~~~ 226 (322)
.+ ....+. ... .+ .....+...+ ........ +..++.+-.+++...
T Consensus 149 ~~----------------~~~~~~----~~~-~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 201 (402)
T 3ia7_A 149 SN----------------GQRHPA----DVE-AV------HSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFA 201 (402)
T ss_dssp HH----------------TCCCGG----GSH-HH------HHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTG
T ss_pred cc----------------cccChh----hHH-HH------HHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCcc
Confidence 00 000000 000 00 0000000000 00011112 556677777776542
Q ss_pred HhhCCCceeeccCCCCCCCCCCCCCCCcCCCccccccCCCCCCcEEEEecCCcccCCHHHHHHHHHcc
Q 044384 227 FTMFPELLPIGPLTASNRQGNSAGYFWREDSNCLKWLDQQQPSSVIYAAFGSLTILDQVQFQEFVDAR 294 (322)
Q Consensus 227 ~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIYvSfGS~~~l~~~q~~ela~~l 294 (322)
.....++..|||+..... +..+|+...+++.+||+++||...-..+.+.+++.++
T Consensus 202 ~~~~~~~~~vGp~~~~~~-------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~ 256 (402)
T 3ia7_A 202 ETFDERFAFVGPTLTGRD-------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAF 256 (402)
T ss_dssp GGCCTTEEECCCCCCC-----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHH
T ss_pred ccCCCCeEEeCCCCCCcc-------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHH
Confidence 222346888999764221 2234665555678999999999876777888888887
No 12
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.67 E-value=6.1e-15 Score=136.30 Aligned_cols=239 Identities=15% Similarity=0.152 Sum_probs=136.9
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCCCC-----CCC
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWED-----RND 77 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~-----~~~ 77 (322)
++||++++.++.||++|+++|+++|.+|||+|+++++....+.+.. .++++..++...+.... ...
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA---------AGATVVPYQSEIIDADAAEVFGSDD 90 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCEEEECCCSTTTCCHHHHHHSSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---------cCCEEEeccccccccccchhhcccc
Confidence 3589999999999999999999999999999999998766655533 36888888754432210 001
Q ss_pred HHHHHHH-HHHHchHHHHHHHHHHhccCCCCccEEEec-CCcchHHHHHHHcCCceEEEccchHHHHHHHHhhhhhhhcC
Q 044384 78 FGKLIEK-FLQVMPRKLEELIEEINSREDEKIDCFIAD-GNMGWSLEVAKKMNVRGGVFWSSSAASVALVFRIPKLIDDG 155 (322)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D-~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~~g 155 (322)
....+.. +.......+.++.+.+.. .+||+||+| .+..++..+|+++|||.+.+.+....... +...+.+..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~~-- 164 (415)
T 3rsc_A 91 LGVRPHLMYLRENVSVLRATAEALDG---DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQDMVT-- 164 (415)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHSS---SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-ccccccccc--
Confidence 1111111 112222223333333332 579999999 77778889999999999987644321000 000000000
Q ss_pred CcCCCCCCCCccccccCCCCCCCCccccccccccCCchhhHHHHHHHHH------HHhccC-CCEEEEcCchhccHHHHh
Q 044384 156 IIDSHGTPMSMQMFLIAPNMPEMNSRDCFWAHIGDLTTQKIFFDLLDRN------TRAMRA-VNFHFCNSTYELESEAFT 228 (322)
Q Consensus 156 ~~~~~~~~~~~~~~~~vP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~vl~Ns~~~le~~~~~ 228 (322)
.+.+..+.. .. .+ ...+.++..+. ...... .+..++.+-.+++.....
T Consensus 165 --------------~~~~~~p~~----~~-~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 219 (415)
T 3rsc_A 165 --------------LAGTIDPLD----LP-VF------RDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDT 219 (415)
T ss_dssp --------------HHTCCCGGG----CH-HH------HHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGG
T ss_pred --------------ccccCChhh----HH-HH------HHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCccc
Confidence 000000000 00 00 00001111000 011111 267777877777764322
Q ss_pred hCCCceeeccCCCCCCCCCCCCCCCcCCCccccccCCCCCCcEEEEecCCcccCCHHHHHHHHHcc
Q 044384 229 MFPELLPIGPLTASNRQGNSAGYFWREDSNCLKWLDQQQPSSVIYAAFGSLTILDQVQFQEFVDAR 294 (322)
Q Consensus 229 ~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIYvSfGS~~~l~~~q~~ela~~l 294 (322)
...++..|||...... +..+|+...+++.+|||++||...-..+.+.+++.++
T Consensus 220 ~~~~~~~vGp~~~~~~-------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al 272 (415)
T 3rsc_A 220 FDDRFVFVGPCFDDRR-------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAF 272 (415)
T ss_dssp CCTTEEECCCCCCCCG-------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHH
T ss_pred CCCceEEeCCCCCCcc-------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHH
Confidence 2346888999764221 2335666556678999999999866777888888887
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.61 E-value=1.8e-14 Score=131.73 Aligned_cols=225 Identities=10% Similarity=0.035 Sum_probs=130.9
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCC------------CC
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGM------------EP 71 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~------------~~ 71 (322)
+||++++.++.||++|+++|+++|+++||+||++++......+.. .+++++.++... +.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG---------VGLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---------CCCEEEEeCCcchHHHHhhhcccCcc
Confidence 379999999999999999999999999999999998765443322 357777776432 00
Q ss_pred CCCCC-CHHHHH-HH-HHHHchHHHHHHHHHHhccCCCCccEEEecCCcchHHHHHHHcCCceEEEccchHHHHHHHHhh
Q 044384 72 WEDRN-DFGKLI-EK-FLQVMPRKLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGGVFWSSSAASVALVFRI 148 (322)
Q Consensus 72 ~~~~~-~~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~ 148 (322)
..... .....+ .. +...+...+.++.+.+.. .+||+||+|.+..|+..+|+.+|+|.+.++....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~--------- 139 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA---WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAV--------- 139 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC---------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCc---------
Confidence 00010 111111 11 111112223333333322 4699999998878888999999999998753210
Q ss_pred hhhhhcCCcCCCCCCCCccccccCCCCCCCCccccccccccCCchhhHHHHHHHHH-HHhccCCCEEEEcCchhccHHHH
Q 044384 149 PKLIDDGIIDSHGTPMSMQMFLIAPNMPEMNSRDCFWAHIGDLTTQKIFFDLLDRN-TRAMRAVNFHFCNSTYELESEAF 227 (322)
Q Consensus 149 ~~l~~~g~~~~~~~~~~~~~~~~vP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vl~Ns~~~le~~~~ 227 (322)
...++ . . .+ .....+...+. ....+.++.+++|+...++.+.
T Consensus 140 ----------------------~~~~~-----~--~-~~------~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~- 182 (384)
T 2p6p_A 140 ----------------------DADGI-----H--P-GA------DAELRPELSELGLERLPAPDLFIDICPPSLRPAN- 182 (384)
T ss_dssp ----------------------CCTTT-----H--H-HH------HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT-
T ss_pred ----------------------ccchh-----h--H-HH------HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC-
Confidence 00000 0 0 00 00000111100 0011126789999999887642
Q ss_pred hhCCCceeeccCCCCCCCCCCCCCCCcCCCccccccCCCCCCcEEEEecCCcccC-----CHHHHHHHHHcc-------e
Q 044384 228 TMFPELLPIGPLTASNRQGNSAGYFWREDSNCLKWLDQQQPSSVIYAAFGSLTIL-----DQVQFQEFVDAR-------F 295 (322)
Q Consensus 228 ~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIYvSfGS~~~l-----~~~q~~ela~~l-------l 295 (322)
+ .+. ..++.+ + . . .+.++.+|++.++++++|||+|||.... +.+.+.+++.+| +
T Consensus 183 ~-~~~-~~~~~~-~--~-~--------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 248 (384)
T 2p6p_A 183 A-APA-RMMRHV-A--T-S--------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELI 248 (384)
T ss_dssp S-CCC-EECCCC-C--C-C--------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEE
T ss_pred C-CCC-CceEec-C--C-C--------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEE
Confidence 1 221 122222 0 0 0 1235778998766678999999998754 557778887777 7
Q ss_pred eeecC
Q 044384 296 WLRLP 300 (322)
Q Consensus 296 Wv~r~ 300 (322)
|+...
T Consensus 249 ~~~g~ 253 (384)
T 2p6p_A 249 VAAPD 253 (384)
T ss_dssp EECCH
T ss_pred EEeCC
Confidence 87654
No 14
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.60 E-value=1.6e-15 Score=140.02 Aligned_cols=247 Identities=13% Similarity=0.090 Sum_probs=135.5
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCCC--CCCCHHHH
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWE--DRNDFGKL 81 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~--~~~~~~~~ 81 (322)
+||++++.+..||++|++.|+++|.+|||+|+++++......+.. .++++..++....... ........
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~---------~g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE---------VGVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH---------TTCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH---------cCCceeecCCCHHHHhccccCCHHHH
Confidence 369999999999999999999999999999999998765554433 3577777763221100 00000000
Q ss_pred HHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcchH---HHHHHHcCCceEEEccchHHHHHHHHh-hhhhhhcCCc
Q 044384 82 IEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMGWS---LEVAKKMNVRGGVFWSSSAASVALVFR-IPKLIDDGII 157 (322)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~---~~vA~~l~iP~i~~~~~~~~~~~~~~~-~~~l~~~g~~ 157 (322)
...+.......++++.+.+ .++|+||+|....++ ..+|+++|||++.+..+.......+.. ...+......
T Consensus 72 ~~~~~~~~~~~~~~l~~~~-----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~~~ 146 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGAD 146 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh-----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHHHH
Confidence 0111111222223332222 358999999776544 678999999999876554310000000 0000000000
Q ss_pred CCCCCCCCccccccCCCCCCCCccccccccccCCchhhHHHHHHHHHHHhccCCCEEEEcCchhccHHHHhhCCCceeec
Q 044384 158 DSHGTPMSMQMFLIAPNMPEMNSRDCFWAHIGDLTTQKIFFDLLDRNTRAMRAVNFHFCNSTYELESEAFTMFPELLPIG 237 (322)
Q Consensus 158 ~~~~~~~~~~~~~~vP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ns~~~le~~~~~~~p~v~~VG 237 (322)
.. +...-+....--|+++. . . ..+ . ...+..++|+...+.+.. +..++++.+|
T Consensus 147 ~~--~~~~~~~~~~~lgl~~~------------~---~-~~~-------~-~~~~~~l~~~~~~l~p~~-~~~~~~~~~G 199 (404)
T 3h4t_A 147 RL--FGDAVNSHRASIGLPPV------------E---H-LYD-------Y-GYTDQPWLAADPVLSPLR-PTDLGTVQTG 199 (404)
T ss_dssp HH--HHHHHHHHHHHTTCCCC------------C---C-HHH-------H-HHCSSCEECSCTTTSCCC-TTCCSCCBCC
T ss_pred HH--hHHHHHHHHHHcCCCCC------------c---c-hhh-------c-cccCCeEEeeCcceeCCC-CCCCCeEEeC
Confidence 00 00000000000000000 0 0 000 0 012234667777776542 3345788999
Q ss_pred cCCCCCCCCCCCCCCCcCCCccccccCCCCCCcEEEEecCCcccCCHHHHHHHHHcc-------eeeecCCC
Q 044384 238 PLTASNRQGNSAGYFWREDSNCLKWLDQQQPSSVIYAAFGSLTILDQVQFQEFVDAR-------FWLRLPTT 302 (322)
Q Consensus 238 pl~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIYvSfGS~~~l~~~q~~ela~~l-------lWv~r~~~ 302 (322)
+++..... .+++++.+||+. .+.+|||+|||+.. +.+.++.++.+| +|+...+.
T Consensus 200 ~~~~~~~~--------~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~ 260 (404)
T 3h4t_A 200 AWILPDQR--------PLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAG 260 (404)
T ss_dssp CCCCCCCC--------CCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTT
T ss_pred ccccCCCC--------CCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 88764322 267789999986 34799999999987 778888888887 88876543
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.58 E-value=2.6e-14 Score=133.33 Aligned_cols=123 Identities=12% Similarity=0.096 Sum_probs=82.9
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCC-C---------
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEP-W--------- 72 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~-~--------- 72 (322)
.+||++++.++.||++|+++|+++|.++||+||++++....+.+.. .+++++.++..... .
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~---------~G~~~~~i~~~~~~~~~~~~~~~~~ 90 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA---------AGLTAVPVGTDVDLVDFMTHAGHDI 90 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TTCCEEECSCCCCHHHHHHHTTHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh---------CCCceeecCCccchHHHhhhhhccc
Confidence 4689999999999999999999999999999999998765443322 36888888754210 0
Q ss_pred ------CC-----CC--CHHHH---HHHHHHH----c-hH-HHHHHHHHHhccCCCCccEEEecCCcchHHHHHHHcCCc
Q 044384 73 ------ED-----RN--DFGKL---IEKFLQV----M-PR-KLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVR 130 (322)
Q Consensus 73 ------~~-----~~--~~~~~---~~~~~~~----~-~~-~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l~iP 130 (322)
.. .. ....+ ...+... + .. .+.++++.+.. .+||+||+|.+..++..+|+++|||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~aA~~lgiP 167 (441)
T 2yjn_A 91 IDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAVTGTP 167 (441)
T ss_dssp HHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHHTCC
T ss_pred ccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---cCCCEEEecCcchhHHHHHHHcCCC
Confidence 00 10 11111 1111111 1 12 44555543332 4799999999878888999999999
Q ss_pred eEEEccc
Q 044384 131 GGVFWSS 137 (322)
Q Consensus 131 ~i~~~~~ 137 (322)
.+.+...
T Consensus 168 ~v~~~~~ 174 (441)
T 2yjn_A 168 HARLLWG 174 (441)
T ss_dssp EEEECSS
T ss_pred EEEEecC
Confidence 9988644
No 16
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.20 E-value=2.4e-09 Score=98.30 Aligned_cols=119 Identities=17% Similarity=0.076 Sum_probs=78.0
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCC--------------
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDG-------------- 68 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~-------------- 68 (322)
++||+++..++.||+++++.|+++|.++||+|+++++......+.. .++++..++..
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK---------LGFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCEEEECCCCHHHHHHHHHHHHHS
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh---------cCCceeecCcccccchhhhhhhhhc
Confidence 4689999999999999999999999999999999998754333322 36788777631
Q ss_pred ---CCCCC---CCCCHHHHHHHH-HHHchHHHHHHHHHHhccCCCCccEEEecCCcchHHHHHHHcCCceEEEcc
Q 044384 69 ---MEPWE---DRNDFGKLIEKF-LQVMPRKLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGGVFWS 136 (322)
Q Consensus 69 ---~~~~~---~~~~~~~~~~~~-~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~ 136 (322)
.+... ........+... ...+...+.+++++ .+||+||+|....++..+|+++|+|.|....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~ 159 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER------LRPDLVVQEISNYGAGLAALKAGIPTICHGV 159 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHTCCEEEECC
T ss_pred ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh------cCCCEEEECchhhHHHHHHHHcCCCEEEecc
Confidence 00000 001111111111 11112334444444 5799999997777777889999999887643
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.13 E-value=3.8e-10 Score=103.56 Aligned_cols=117 Identities=17% Similarity=0.241 Sum_probs=80.9
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCC------------
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGME------------ 70 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~------------ 70 (322)
.+||+++..++.||++|++.|+++|.++||+|+++++ .....+.. .+++++.++....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA---------AGLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT---------TTCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh---------CCCeeEecCCccCHHHHhhhcccCC
Confidence 3689999999999999999999999999999999998 55444432 3688888764311
Q ss_pred ----------CCCCCCCHHHHHHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcchHHHHHHHcCCceEEEc
Q 044384 71 ----------PWEDRNDFGKLIEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGGVFW 135 (322)
Q Consensus 71 ----------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~ 135 (322)
...........+......+...+.+++++ .+||+||+|....++..+|+.+|+|.+...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~pDlVv~d~~~~~~~~aA~~~giP~v~~~ 158 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD------YRPDLVVYEQGATVGLLAADRAGVPAVQRN 158 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHTCCEEEEC
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCEEEECchhhHHHHHHHHcCCCEEEEe
Confidence 00011111122222222233445555555 579999999777778889999999998765
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.01 E-value=1.3e-09 Score=99.65 Aligned_cols=119 Identities=13% Similarity=0.082 Sum_probs=75.7
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEec-CCCCC----------C
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSI-PDGME----------P 71 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i-~~~~~----------~ 71 (322)
++||+++..++.||+++++.|+++|.++||+|+++++....+.+.. .+++++.+ ..... .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG---------AGLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH---------BTCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh---------CCCceeeecCCccchhhhhhhcccc
Confidence 3689999999999999999999999999999999998654443332 25666666 22110 0
Q ss_pred CC----CC--CCHHHHHHHHHHHc-------hHHHHHHHHHHhccCCCCccEEEecCCcchHHHHHHHcCCceEEEcc
Q 044384 72 WE----DR--NDFGKLIEKFLQVM-------PRKLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGGVFWS 136 (322)
Q Consensus 72 ~~----~~--~~~~~~~~~~~~~~-------~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~ 136 (322)
.. .. ......+......+ ...+.+++++ .+||+||+|.+..++..+|+.+|+|.+.+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~ 143 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA------WRPSVLLVDVCALIGRVLGGLLDLPVVLHRW 143 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHTTCCEEEECC
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh------cCCCEEEeCcchhHHHHHHHHhCCCEEEEec
Confidence 00 00 00111111111111 2223344444 5799999998667777889999999988753
No 19
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=98.99 E-value=7.2e-10 Score=101.64 Aligned_cols=120 Identities=16% Similarity=0.138 Sum_probs=77.8
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCC---------CCC
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGME---------PWE 73 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~---------~~~ 73 (322)
++||++++.++.||++|++.|+++|.++||+|+++++....+.+.. .++.++.++.... ...
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG---------AGLPFAPTCPSLDMPEVLSWDREGN 85 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH---------TTCCEEEEESSCCHHHHHSBCTTSC
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh---------CCCeeEecCCccchHhhhhhhccCc
Confidence 4689999999999999999999999999999999998655444433 2466665542100 000
Q ss_pred ---CCCCHHHHH----HHHHHHch---HHHHHHHHHHhccCCCCccEEEecCCcchHHHHHHHcCCceEEEccc
Q 044384 74 ---DRNDFGKLI----EKFLQVMP---RKLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGGVFWSS 137 (322)
Q Consensus 74 ---~~~~~~~~~----~~~~~~~~---~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~~ 137 (322)
......... ..+..... ..+.+++++ .+||+||+|....++..+|+.+|+|.+.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~ 153 (398)
T 4fzr_A 86 RTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER------WKPDLVLTETYSLTGPLVAATLGIPWIEQSIR 153 (398)
T ss_dssp BCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCSEEEEETTCTHHHHHHHHHTCCEEEECCS
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh------CCCCEEEECccccHHHHHHHhhCCCEEEeccC
Confidence 001111111 11111111 223333433 57999999987778888999999999876643
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.55 E-value=3.7e-07 Score=82.70 Aligned_cols=114 Identities=20% Similarity=0.239 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccch-hhHHhhhccCCCCCCCeEEEecCC-CCCCCCCC---
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH-KRVVESLQGKNYLEEQIRLVSIPD-GMEPWEDR--- 75 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~-~~~~~~~~~~~~~~~~i~~~~i~~-~~~~~~~~--- 75 (322)
|++ +|++..-...||++|.++||++|.+|||+|+|+++.... ..+... .++.+..++- +++.....
T Consensus 1 M~~-~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~--------~g~~~~~i~~~~~~~~~~~~~~ 71 (365)
T 3s2u_A 1 MKG-NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK--------AGLPLHLIQVSGLRGKGLKSLV 71 (365)
T ss_dssp --C-EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG--------GTCCEEECC-------------
T ss_pred CCC-cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh--------cCCcEEEEECCCcCCCCHHHHH
Confidence 665 677655433499999999999999999999999876432 222111 2567776663 22111000
Q ss_pred CCHHHHHHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcch--HHHHHHHcCCceEEE
Q 044384 76 NDFGKLIEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMGW--SLEVAKKMNVRGGVF 134 (322)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~vA~~l~iP~i~~ 134 (322)
.....++..+ ....+++++ .+||+||++....+ +...|+.+|+|.++.
T Consensus 72 ~~~~~~~~~~-----~~~~~~l~~------~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 72 KAPLELLKSL-----FQALRVIRQ------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp -CHHHHHHHH-----HHHHHHHHH------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHH-----HHHHHHHHh------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 1111111111 123445555 57999999966543 345688899999875
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=97.93 E-value=6e-05 Score=67.46 Aligned_cols=118 Identities=21% Similarity=0.257 Sum_probs=69.2
Q ss_pred CCC--CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCC-CCCCCCCCC
Q 044384 1 MSS--PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDG-MEPWEDRND 77 (322)
Q Consensus 1 m~~--~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~-~~~~~~~~~ 77 (322)
|.+ ++|+++.....||..++..|+++|+++||+|++++....... .... ..++++..++.. +.. ..
T Consensus 2 M~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~--~~~~-----~~g~~~~~~~~~~~~~----~~ 70 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEA--DLVP-----KHGIEIDFIRISGLRG----KG 70 (364)
T ss_dssp -----CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHH--HHGG-----GGTCEEEECCCCCCTT----CC
T ss_pred CCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchh--hhcc-----ccCCceEEecCCccCc----Cc
Confidence 454 689999866669999999999999999999999998643211 1110 025776666531 111 11
Q ss_pred HHHHHHHHHH--HchHHHHHHHHHHhccCCCCccEEEecCCc--chHHHHHHHcCCceEEEc
Q 044384 78 FGKLIEKFLQ--VMPRKLEELIEEINSREDEKIDCFIADGNM--GWSLEVAKKMNVRGGVFW 135 (322)
Q Consensus 78 ~~~~~~~~~~--~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~--~~~~~vA~~l~iP~i~~~ 135 (322)
....+..... .....+.+++++ .+||+|+++... ..+..+++.+|+|.+...
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 126 (364)
T 1f0k_A 71 IKALIAAPLRIFNAWRQARAIMKA------YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHE 126 (364)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHH------HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh------cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEe
Confidence 1111100000 011223444444 469999998654 234567788899988654
No 22
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=96.73 E-value=0.00096 Score=52.91 Aligned_cols=48 Identities=10% Similarity=0.162 Sum_probs=40.4
Q ss_pred cCCCccccccCCCCCCcEEEEecCCcc-cCCHHHHHHHHHcc-------eeeecCC
Q 044384 254 REDSNCLKWLDQQQPSSVIYAAFGSLT-ILDQVQFQEFVDAR-------FWLRLPT 301 (322)
Q Consensus 254 ~~~~~~~~wLd~~~~~sVIYvSfGS~~-~l~~~q~~ela~~l-------lWv~r~~ 301 (322)
++++++.+|+++++++.+|||+|||.. ..+.+.+.+++.+| +|+...+
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~ 61 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN 61 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc
Confidence 378899999998767789999999986 56888889988887 8888654
No 23
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=96.51 E-value=0.033 Score=50.52 Aligned_cols=132 Identities=17% Similarity=0.061 Sum_probs=67.8
Q ss_pred CCCeEEEEcC---C--CCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHh---------h--hccCCCCCCCeEEEec
Q 044384 2 SSPHVLVMPG---P--AQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVE---------S--LQGKNYLEEQIRLVSI 65 (322)
Q Consensus 2 ~~~hv~~~p~---p--~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~---------~--~~~~~~~~~~i~~~~i 65 (322)
++++|+++.. | ..|--.-+..|+++|+++||+|+++++......-.. . .........++++..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 3578888772 2 357777899999999999999999996532210000 0 0000001135665555
Q ss_pred CCCCCCCC-CCCCHHHH-HHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcch--HHHHHHHcCCceEEEc
Q 044384 66 PDGMEPWE-DRNDFGKL-IEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMGW--SLEVAKKMNVRGGVFW 135 (322)
Q Consensus 66 ~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~vA~~l~iP~i~~~ 135 (322)
+...-... ........ ...+. .....+..+++.+.... .++|+|.+-..... +..+++..++|.|...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~ 152 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAV-TFGRASVLLLNDLLREE-PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTI 152 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHH-HHHHHHHHHHHHHTTTS-CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEE
T ss_pred cchhccccccccCCcchhhhhhH-HHHHHHHHHHHHHhccC-CCCeEEEecchhhhhhHHHHhhccCCCEEEEe
Confidence 43110000 01111111 21111 12233445555542111 57999998765432 3456677899987643
No 24
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=96.20 E-value=0.019 Score=51.32 Aligned_cols=109 Identities=14% Similarity=0.080 Sum_probs=66.3
Q ss_pred CCCCeEEEEcC--C--CCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCCCCCC
Q 044384 1 MSSPHVLVMPG--P--AQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWEDRN 76 (322)
Q Consensus 1 m~~~hv~~~p~--p--~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 76 (322)
|++++|+++.. + ..|+-..+..+++.| +||+|++++............ ...++++..++..... .
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~ 70 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRSVML----P 70 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSSSCC----S
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEccccccc----c
Confidence 45678888864 3 468889999999999 799999999875543111110 0135677666542111 0
Q ss_pred CHHHHHHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcc--hHHHHHHHcCCceEEEc
Q 044384 77 DFGKLIEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMG--WSLEVAKKMNVRGGVFW 135 (322)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l~iP~i~~~ 135 (322)
.. .....+.+++++ .++|+|++....+ +...+++++++|.+++.
T Consensus 71 ~~---------~~~~~l~~~~~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~ 116 (394)
T 3okp_A 71 TP---------TTAHAMAEIIRE------REIDNVWFGAAAPLALMAGTAKQAGASKVIAS 116 (394)
T ss_dssp CH---------HHHHHHHHHHHH------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEE
T ss_pred ch---------hhHHHHHHHHHh------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEE
Confidence 11 011234455655 5799999865543 45567889999855543
No 25
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=95.84 E-value=0.0093 Score=52.55 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=33.0
Q ss_pred CCCCeEEEEcCC----------------CCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 1 MSSPHVLVMPGP----------------AQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 1 m~~~hv~~~p~p----------------~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
|+++||+++... ..|.-.-...+++.|+++||+|++++...
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~ 57 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPG 57 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTT
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 788888888754 25778889999999999999999998754
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=95.79 E-value=0.045 Score=49.77 Aligned_cols=120 Identities=14% Similarity=0.109 Sum_probs=64.2
Q ss_pred CCeEEEEcC---C--------CCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCC
Q 044384 3 SPHVLVMPG---P--------AQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEP 71 (322)
Q Consensus 3 ~~hv~~~p~---p--------~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~ 71 (322)
+++|+++.. | ..|+-..+..|++.|+++||+|++++........ ... ....++++..++.....
T Consensus 20 mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-~~~----~~~~~v~v~~~~~~~~~ 94 (438)
T 3c48_A 20 HMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQG-EIV----RVAENLRVINIAAGPYE 94 (438)
T ss_dssp CCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGC-SEE----EEETTEEEEEECCSCSS
T ss_pred hheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCc-ccc----cccCCeEEEEecCCCcc
Confidence 468888874 2 3588999999999999999999999875432110 000 00135676666532111
Q ss_pred CCCCCCHHHHHHHHHHHchHHHHHH-HHHHhccCCCCccEEEecCCcc--hHHHHHHHcCCceEEEcc
Q 044384 72 WEDRNDFGKLIEKFLQVMPRKLEEL-IEEINSREDEKIDCFIADGNMG--WSLEVAKKMNVRGGVFWS 136 (322)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~l-l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l~iP~i~~~~ 136 (322)
..........+..+. ..+.+. ++.. .++|+|++..... .+..+++.+++|.|...-
T Consensus 95 ~~~~~~~~~~~~~~~----~~~~~~~~~~~-----~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h 153 (438)
T 3c48_A 95 GLSKEELPTQLAAFT----GGMLSFTRREK-----VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAH 153 (438)
T ss_dssp SCCGGGGGGGHHHHH----HHHHHHHHHHT-----CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECS
T ss_pred ccchhHHHHHHHHHH----HHHHHHHHhcc-----CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEec
Confidence 101111111111111 111122 3321 2499999875432 233467778999876543
No 27
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=95.59 E-value=0.039 Score=51.36 Aligned_cols=123 Identities=16% Similarity=0.217 Sum_probs=65.5
Q ss_pred CeEEEEcC---C------------CCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhcc-CCCC--CCCeEEEec
Q 044384 4 PHVLVMPG---P------------AQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQG-KNYL--EEQIRLVSI 65 (322)
Q Consensus 4 ~hv~~~p~---p------------~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~-~~~~--~~~i~~~~i 65 (322)
+||+++.. | ..|.-..+..|++.|+++||+|++++.......... +.. .... ..+++++.+
T Consensus 8 MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~~~~~~~~gv~v~~~ 86 (499)
T 2r60_A 8 KHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPE-FSGEIDYYQETNKVRIVRI 86 (499)
T ss_dssp CEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGG-GCCSEEECTTCSSEEEEEE
T ss_pred ceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccc-hhhhHHhccCCCCeEEEEe
Confidence 68888874 2 357888999999999999999999987532211000 000 0000 136777777
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcc--hHHHHHHHcCCceEEEc
Q 044384 66 PDGMEPWEDRNDFGKLIEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMG--WSLEVAKKMNVRGGVFW 135 (322)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l~iP~i~~~ 135 (322)
+...............+..+ ...+.+++++.. .++|+|.+-.... .+..+++.+|+|.|...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~~----~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~ 150 (499)
T 2r60_A 87 PFGGDKFLPKEELWPYLHEY----VNKIINFYREEG----KFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTG 150 (499)
T ss_dssp CCSCSSCCCGGGCGGGHHHH----HHHHHHHHHHHT----CCCSEEEEEHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred cCCCcCCcCHHHHHHHHHHH----HHHHHHHHHhcC----CCCCEEEEcCCcchHHHHHHHHhcCCcEEEEc
Confidence 63211110000111111111 112334444311 3699998865432 23346777899987543
No 28
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=94.55 E-value=0.41 Score=42.71 Aligned_cols=112 Identities=13% Similarity=0.177 Sum_probs=60.3
Q ss_pred CeEEEEcCCC-CcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCCCCCCCHHHHH
Q 044384 4 PHVLVMPGPA-QGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWEDRNDFGKLI 82 (322)
Q Consensus 4 ~hv~~~p~p~-~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~ 82 (322)
+++....+|. .|.-.-...|+++|+++||+|++++...... ... ...++.+..++............ . .
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~-------~~~~i~~~~~~~~~~~~~~~~~~-~-~ 85 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNK-------VYPNIYFHEVTVNQYSVFQYPPY-D-L 85 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C-------CCTTEEEECCCCC----CCSCCH-H-H
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-ccc-------cCCceEEEecccccccccccccc-c-H
Confidence 3566666665 4788899999999999999999998753221 100 11356665544210000000000 0 0
Q ss_pred HHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcc--hHHHHHHHc---CCceEEEcc
Q 044384 83 EKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMG--WSLEVAKKM---NVRGGVFWS 136 (322)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l---~iP~i~~~~ 136 (322)
. ....+.+++++ .++|+|++....+ +...++.++ ++|.|...-
T Consensus 86 ~-----~~~~l~~~l~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h 133 (394)
T 2jjm_A 86 A-----LASKMAEVAQR------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLH 133 (394)
T ss_dssp H-----HHHHHHHHHHH------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECC
T ss_pred H-----HHHHHHHHHHH------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEe
Confidence 0 11224455554 4699999875443 233445544 589876543
No 29
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=93.38 E-value=0.29 Score=43.13 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=30.0
Q ss_pred eEEEEc---CCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 5 HVLVMP---GPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 5 hv~~~p---~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
+|+++. .|..|.-.-+..++++|+++||+|++++...
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 41 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSW 41 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEE
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCC
Confidence 366653 2456888899999999999999999999763
No 30
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=92.68 E-value=0.54 Score=41.88 Aligned_cols=40 Identities=13% Similarity=0.147 Sum_probs=31.5
Q ss_pred CCeEEEEcC---CC-CcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 044384 3 SPHVLVMPG---PA-QGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (322)
Q Consensus 3 ~~hv~~~p~---p~-~gH~~p~~~la~~La~rGh~VT~it~~~~ 42 (322)
+++|+++.. +. .|+-.-+..+++.|+++||+|++++....
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 63 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASP 63 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCT
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCc
Confidence 457887763 22 57778999999999999999999998643
No 31
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=91.30 E-value=1.6 Score=38.37 Aligned_cols=112 Identities=13% Similarity=0.084 Sum_probs=56.8
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhC-CCEEEEEeCccchhhHHhhhccCCCCCCCeEE-EecCCCCCCCCCCCCHHHH
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYYHKRVVESLQGKNYLEEQIRL-VSIPDGMEPWEDRNDFGKL 81 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~r-Gh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~-~~i~~~~~~~~~~~~~~~~ 81 (322)
++|+++... .+.......++++|.++ ||+|.++++............. .++.+ ..++-. .........
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~----~~~~~~~~~ 75 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSL-----FGIQEDRNLDVM----QERQALPDL 75 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHT-----TTCCCSEECCCC----SSCCCHHHH
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHH-----cCCCcccccccC----CCCccHHHH
Confidence 478877632 33445567889999998 7998877664332211111100 12221 122210 011111111
Q ss_pred HHHHHHHchHHHHHHHHHHhccCCCCccEEEe--cCCcch-HHHHHHHcCCceEEEc
Q 044384 82 IEKFLQVMPRKLEELIEEINSREDEKIDCFIA--DGNMGW-SLEVAKKMNVRGGVFW 135 (322)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~--D~~~~~-~~~vA~~l~iP~i~~~ 135 (322)
... ....+.+++++ .+||+|++ +....+ +..+|+.+|+|.+.+.
T Consensus 76 ~~~----~~~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 122 (376)
T 1v4v_A 76 AAR----ILPQAARALKE------MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVE 122 (376)
T ss_dssp HHH----HHHHHHHHHHH------TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEET
T ss_pred HHH----HHHHHHHHHHH------cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEe
Confidence 111 11234455555 67999998 322334 3467888999987654
No 32
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=89.95 E-value=2.3 Score=37.21 Aligned_cols=38 Identities=16% Similarity=0.122 Sum_probs=28.9
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhC-C-CEEEEEeCcc
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKH-G-FRVTFVNTDY 41 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~r-G-h~VT~it~~~ 41 (322)
+++|+++. ...++......++++|+++ | |+|+++++..
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~ 47 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQ 47 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCS
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCC
Confidence 46888886 3357778889999999987 5 8887777653
No 33
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=89.25 E-value=0.54 Score=42.26 Aligned_cols=42 Identities=10% Similarity=0.078 Sum_probs=34.1
Q ss_pred CCCCeEEEEcCC--CCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 044384 1 MSSPHVLVMPGP--AQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (322)
Q Consensus 1 m~~~hv~~~p~p--~~gH~~p~~~la~~La~rGh~VT~it~~~~ 42 (322)
|++++|+++... ..|+-..+..|++.|+++||+|++++....
T Consensus 38 ~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGP 81 (416)
T ss_dssp TTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred hhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence 567788777543 358899999999999999999999887543
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=89.15 E-value=0.98 Score=40.84 Aligned_cols=112 Identities=16% Similarity=0.166 Sum_probs=58.3
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCccch---hhHHhhhccCCCCCCCeEE-EecCCCCCCCCC
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYYH---KRVVESLQGKNYLEEQIRL-VSIPDGMEPWED 74 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~r--Gh~VT~it~~~~~---~~~~~~~~~~~~~~~~i~~-~~i~~~~~~~~~ 74 (322)
|++++|+++. ...+.++-+..|.++|.++ |+++.++.+.... ......+ +++. ..+. ....
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~--------~i~~~~~l~----v~~~ 91 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIF--------DIKPDIDLD----IMKK 91 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHT--------TCCCSEECC----CCC-
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhc--------CCCCCcccc----cCCC
Confidence 5555777665 4456788889999999987 6888766554321 1111111 1210 1111 1001
Q ss_pred CCCHHHHHHHHHHHchHHHHHHHHHHhccCCCCccEEEe--cCCcch-HHHHHHHcCCceEEEc
Q 044384 75 RNDFGKLIEKFLQVMPRKLEELIEEINSREDEKIDCFIA--DGNMGW-SLEVAKKMNVRGGVFW 135 (322)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~--D~~~~~-~~~vA~~l~iP~i~~~ 135 (322)
....... .. ..-..+.+++++ .+||+|++ |....+ +...|.++|||.+.+.
T Consensus 92 ~~~~~~~---~~-~~~~~l~~~l~~------~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 92 GQTLAEI---TS-RVMNGINEVIAA------ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp CCCHHHH---HH-HHHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCHHHH---HH-HHHHHHHHHHHH------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 1122211 11 122235566666 57898876 323334 3567889999987654
No 35
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=88.69 E-value=1.4 Score=39.70 Aligned_cols=115 Identities=13% Similarity=0.111 Sum_probs=59.3
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhC-CCEEEEEeCccchhhHHhhhccCCCCCCCeE-EEecCCCCCCCCCCCCH
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYYHKRVVESLQGKNYLEEQIR-LVSIPDGMEPWEDRNDF 78 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~r-Gh~VT~it~~~~~~~~~~~~~~~~~~~~~i~-~~~i~~~~~~~~~~~~~ 78 (322)
|++++|+++. ...+.++-+.+|.++|.++ |+++.++.+............. -+++ ...+. + .......
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~-----~~i~~~~~l~--~--~~~~~~~ 92 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLEL-----FSITPDFDLN--I--MEPGQTL 92 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHH-----TTCCCSEECC--C--CCTTCCH
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh-----cCCCCceeee--c--CCCCCCH
Confidence 3445676655 5567788889999999987 7888766554332111111100 0121 00111 0 0011122
Q ss_pred HHHHHHHHHHchHHHHHHHHHHhccCCCCccEEEe--cCCcchH-HHHHHHcCCceEEEc
Q 044384 79 GKLIEKFLQVMPRKLEELIEEINSREDEKIDCFIA--DGNMGWS-LEVAKKMNVRGGVFW 135 (322)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~--D~~~~~~-~~vA~~l~iP~i~~~ 135 (322)
.... . ..-..+.+++++ .+||+|++ |....++ ...|.++|||.+.+.
T Consensus 93 ~~~~---~-~~~~~l~~~l~~------~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ 142 (396)
T 3dzc_A 93 NGVT---S-KILLGMQQVLSS------EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp HHHH---H-HHHHHHHHHHHH------HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred HHHH---H-HHHHHHHHHHHh------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 2211 1 122235566666 57898876 3333344 467888999987663
No 36
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=88.35 E-value=2 Score=37.86 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=25.8
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhCCC-EEEEEeC
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGF-RVTFVNT 39 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~rGh-~VT~it~ 39 (322)
+|+++. ...++...+.+|+++|.++|+ ++.++.+
T Consensus 2 kIl~v~-~~~~~~~~~~~l~~~L~~~g~~~~~v~~~ 36 (384)
T 1vgv_A 2 KVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVT 36 (384)
T ss_dssp EEEEEE-CSHHHHHHHHHHHHHHHHSTTCEEEEEEC
T ss_pred eEEEEe-cccHHHHHHHHHHHHHHhCCCCceEEEEc
Confidence 577664 235778888999999999994 8877654
No 37
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=85.08 E-value=13 Score=29.84 Aligned_cols=97 Identities=11% Similarity=0.080 Sum_probs=60.1
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccch-----hhHHhhhccCCCCCCCeEEEecCCCCCCCCCCCCH
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH-----KRVVESLQGKNYLEEQIRLVSIPDGMEPWEDRNDF 78 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~-----~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~ 78 (322)
..|.++.-+|.|-....+.++.+.+.+|++|-|+..-+.. ..+.... .+++.....++... ..+.
T Consensus 29 g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L--------~v~~~~~g~gf~~~--~~~~ 98 (196)
T 1g5t_A 29 GIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH--------GVEFQVMATGFTWE--TQNR 98 (196)
T ss_dssp CCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG--------TCEEEECCTTCCCC--GGGH
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC--------CcEEEEcccccccC--CCCc
Confidence 4689999999999999999999999999999999654321 1111211 37777776544321 1111
Q ss_pred HHHHHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCc
Q 044384 79 GKLIEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNM 117 (322)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~ 117 (322)
.... ......+..+.+.+.. .++|+||.|-+.
T Consensus 99 ~~~~----~~a~~~l~~a~~~l~~---~~yDlvILDEi~ 130 (196)
T 1g5t_A 99 EADT----AACMAVWQHGKRMLAD---PLLDMVVLDELT 130 (196)
T ss_dssp HHHH----HHHHHHHHHHHHHTTC---TTCSEEEEETHH
T ss_pred HHHH----HHHHHHHHHHHHHHhc---CCCCEEEEeCCC
Confidence 1111 1122334444444432 579999999653
No 38
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=84.23 E-value=9.2 Score=33.11 Aligned_cols=102 Identities=10% Similarity=0.019 Sum_probs=62.0
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCccchhhHHhhhccCCCCCCCe-EEEecCCCCCCCCCCCCHHHH
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYYHKRVVESLQGKNYLEEQI-RLVSIPDGMEPWEDRNDFGKL 81 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~r--Gh~VT~it~~~~~~~~~~~~~~~~~~~~~i-~~~~i~~~~~~~~~~~~~~~~ 81 (322)
+|+++-.-+.|-+.-...+.+.|.++ |.+|++++.......+... +.+ +++.++.. .. ..
T Consensus 2 kILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~~--~~--~~----- 64 (348)
T 1psw_A 2 KILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPLG--HG--AL----- 64 (348)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC----------------
T ss_pred eEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecCC--cc--cc-----
Confidence 68888877779999999999999986 8999999987554433211 344 33333210 00 00
Q ss_pred HHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCc-chHHHHHHHcCCce-EEE
Q 044384 82 IEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNM-GWSLEVAKKMNVRG-GVF 134 (322)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~-~~~~~vA~~l~iP~-i~~ 134 (322)
.-..+.++.+.+.. .+||++| |... .-...++...|+|. +.+
T Consensus 65 -------~~~~~~~l~~~l~~---~~~D~vi-d~~~~~~sa~~~~~~~~~~~ig~ 108 (348)
T 1psw_A 65 -------EIGERRKLGHSLRE---KRYDRAY-VLPNSFKSALVPLFAGIPHRTGW 108 (348)
T ss_dssp -------CHHHHHHHHHHTTT---TTCSEEE-ECSCCSGGGHHHHHTTCSEEEEE
T ss_pred -------chHHHHHHHHHHHh---cCCCEEE-ECCCChHHHHHHHHhCCCEEecc
Confidence 01123345555543 5799988 5443 23446777788987 444
No 39
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=83.30 E-value=0.93 Score=45.00 Aligned_cols=105 Identities=20% Similarity=0.260 Sum_probs=52.9
Q ss_pred HHHHHHHhCCCEEE----EEeCccchhhHHhhhccC---CCCCCCeEEEecCCCCCC-----CCCCCCHHHHHHHHHHHc
Q 044384 22 EFSQCLAKHGFRVT----FVNTDYYHKRVVESLQGK---NYLEEQIRLVSIPDGMEP-----WEDRNDFGKLIEKFLQVM 89 (322)
Q Consensus 22 ~la~~La~rGh~VT----~it~~~~~~~~~~~~~~~---~~~~~~i~~~~i~~~~~~-----~~~~~~~~~~~~~~~~~~ 89 (322)
+|+++|+++||+|| ++|...... ....+... -....+++++.+|-+... .-....+..++..+.
T Consensus 318 ela~~L~~~G~~V~~~V~v~Tr~~~~~-~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~--- 393 (816)
T 3s28_A 318 EMLQRIKQQGLNIKPRILILTRLLPDA-VGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYT--- 393 (816)
T ss_dssp HHHHHHHHTTCCCCCEEEEEEECCTTC-TTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHH---
T ss_pred HHHHHHHHCCCccceeeEEEeCCCCCC-CCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHH---
Confidence 58888899999998 777653221 11111100 011136777777632211 111112222222221
Q ss_pred hHHHHHHHHHHhccCCCCccEEEecCCcc--hHHHHHHHcCCceEEE
Q 044384 90 PRKLEELIEEINSREDEKIDCFIADGNMG--WSLEVAKKMNVRGGVF 134 (322)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l~iP~i~~ 134 (322)
...+..+++.. . .+||+|.+-.... .+..+|+.+|+|.|..
T Consensus 394 ~~~l~~il~~~---~-~~PDVIHsH~~~sglva~llar~~gvP~V~T 436 (816)
T 3s28_A 394 EDAAVELSKEL---N-GKPDLIIGNYSDGNLVASLLAHKLGVTQCTI 436 (816)
T ss_dssp HHHHHHHHHHC---S-SCCSEEEEEHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhc---C-CCCeEEEeCCchHHHHHHHHHHHcCCCEEEE
Confidence 12233444431 1 4699998864332 3456788899998754
No 40
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=82.90 E-value=0.88 Score=41.28 Aligned_cols=39 Identities=13% Similarity=0.200 Sum_probs=28.1
Q ss_pred CCeEEEEcCC---C--CcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 3 SPHVLVMPGP---A--QGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 3 ~~hv~~~p~p---~--~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
+++|+++... + .|=...+..++++|+++||+|++++...
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 3567766522 2 1223458899999999999999999863
No 41
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=81.63 E-value=6.6 Score=34.48 Aligned_cols=105 Identities=20% Similarity=0.140 Sum_probs=65.7
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCccchhhHHhhhccCCCCCCCeE-EEecCCCCCCCCCCCCHH
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYYHKRVVESLQGKNYLEEQIR-LVSIPDGMEPWEDRNDFG 79 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~r--Gh~VT~it~~~~~~~~~~~~~~~~~~~~~i~-~~~i~~~~~~~~~~~~~~ 79 (322)
..+|+++-..+.|-++-..++.+.|.++ +.+||+++.......+... +.|+ ++.++.. ...
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~--------~~~ 71 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDKK--------GRH 71 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECCS--------SHH
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCcc--------ccc
Confidence 4589999998999999999999999986 8999999987655433221 3443 4444321 111
Q ss_pred HHHHHHHHHchHHHHHHHHHHhccCCCCc-cEEEecCCcchHHHHHHHcCCce-EEE
Q 044384 80 KLIEKFLQVMPRKLEELIEEINSREDEKI-DCFIADGNMGWSLEVAKKMNVRG-GVF 134 (322)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-d~vI~D~~~~~~~~vA~~l~iP~-i~~ 134 (322)
..+. .+.++++++.. .+| |++|.=.-..-...++...|+|. +++
T Consensus 72 ~~~~--------~~~~l~~~Lr~---~~y~D~vidl~~~~rs~~l~~~~~a~~riG~ 117 (349)
T 3tov_A 72 NSIS--------GLNEVAREINA---KGKTDIVINLHPNERTSYLAWKIHAPITTGM 117 (349)
T ss_dssp HHHH--------HHHHHHHHHHH---HCCCCEEEECCCSHHHHHHHHHHCCSEEEEC
T ss_pred ccHH--------HHHHHHHHHhh---CCCCeEEEECCCChHHHHHHHHhCCCeEEec
Confidence 0011 12234444433 469 98885333334556788889985 444
No 42
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=81.53 E-value=1.7 Score=33.03 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=29.0
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
|.+.|++++ |.|++- ..+++.|.++||+|+++...
T Consensus 1 ~~~~~vlI~---G~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVC---GHSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEE---CCSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEE---CCCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 788899988 456554 78999999999999999874
No 43
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=80.75 E-value=1.9 Score=40.51 Aligned_cols=38 Identities=21% Similarity=0.289 Sum_probs=29.7
Q ss_pred CCeEEEEcC---C---CCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 3 SPHVLVMPG---P---AQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 3 ~~hv~~~p~---p---~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
++||+++.. | ..|=-..+-.|+++|+++||+|+++++.
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 568998853 3 2344467889999999999999999964
No 44
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=80.27 E-value=4.3 Score=30.48 Aligned_cols=43 Identities=12% Similarity=0.122 Sum_probs=37.3
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccch
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~ 43 (322)
|.+.++++...++-.|-+-..-++..|..+|++|..+...-..
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~ 43 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQ 43 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 7788999999899999999999999999999999987664333
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=80.15 E-value=11 Score=33.65 Aligned_cols=36 Identities=19% Similarity=0.190 Sum_probs=24.5
Q ss_pred CCeEEEEc---CCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 3 SPHVLVMP---GPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 3 ~~hv~~~p---~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
+++|+++. +| .+.-.....++++|+++| +||+++..
T Consensus 14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 14 RPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 46788877 44 222223456788999999 99999543
No 46
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=79.58 E-value=1.7 Score=39.83 Aligned_cols=37 Identities=24% Similarity=0.365 Sum_probs=28.9
Q ss_pred eEEEEcC---C---CCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 5 HVLVMPG---P---AQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 5 hv~~~p~---p---~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
||+++.. | ..|=-.-+..|+++|+++||+|+++++..
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred eEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 5777653 2 34566788999999999999999998753
No 47
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=78.70 E-value=2 Score=39.42 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=28.5
Q ss_pred eEEEEcC---C---CCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 5 HVLVMPG---P---AQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 5 hv~~~p~---p---~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
||+++.. | ..|=-.-+..|+++|+++||+|+++++..
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 2 QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred eEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 5777753 2 24556778899999999999999999753
No 48
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=78.27 E-value=18 Score=30.37 Aligned_cols=38 Identities=18% Similarity=0.399 Sum_probs=31.4
Q ss_pred CeEEEEcC--CCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 4 PHVLVMPG--PAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 4 ~hv~~~p~--p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
.+++++.. ++-|-..-...||..||++|.+|-+|-...
T Consensus 82 ~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 82 VQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp CCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45666653 577999999999999999999999987654
No 49
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=77.25 E-value=4 Score=34.27 Aligned_cols=24 Identities=25% Similarity=0.301 Sum_probs=18.3
Q ss_pred HHHHHHHHHHhCCCEEEEEeCccch
Q 044384 19 PLLEFSQCLAKHGFRVTFVNTDYYH 43 (322)
Q Consensus 19 p~~~la~~La~rGh~VT~it~~~~~ 43 (322)
=+..|+++|.+.| +|+++.+..+.
T Consensus 16 Gi~~L~~~l~~~g-~V~VvAP~~~~ 39 (251)
T 2wqk_A 16 GINALREALKSLG-RVVVVAPDRNL 39 (251)
T ss_dssp HHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred HHHHHHHHHHhCC-CEEEEeeCCCC
Confidence 4677888888888 69988876554
No 50
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=76.95 E-value=3.2 Score=35.53 Aligned_cols=92 Identities=18% Similarity=0.138 Sum_probs=54.9
Q ss_pred EEEEc----CCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCCCCCCCHHHH
Q 044384 6 VLVMP----GPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWEDRNDFGKL 81 (322)
Q Consensus 6 v~~~p----~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 81 (322)
|++.. .-|.||+.=.+.||++|. +|+|++.......+ .. -++.+..++. .+.
T Consensus 3 i~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~-~~--------~g~~v~~l~~--------~d~--- 58 (282)
T 3hbm_A 3 VLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLI-DE--------IPYPVYELSS--------ESI--- 58 (282)
T ss_dssp EEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCG-GG--------CCSCEEECSS--------SCH---
T ss_pred EEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHhHH-HH--------CCCeEEEcCc--------cCH---
Confidence 55554 336799999999999998 79999865322111 11 1344444432 011
Q ss_pred HHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcc---hHHHHHHHcCCceEEEcc
Q 044384 82 IEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMG---WSLEVAKKMNVRGGVFWS 136 (322)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~---~~~~vA~~l~iP~i~~~~ 136 (322)
..+.+++++ .++|+||.|.... |-..+....+++.+++--
T Consensus 59 ---------~~~~~~l~~------~~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD 101 (282)
T 3hbm_A 59 ---------YELINLIKE------EKFELLIIDHYGISVDDEKLIKLETGVKILSFDD 101 (282)
T ss_dssp ---------HHHHHHHHH------HTCSEEEEECTTCCHHHHHHHHHHHCCEEEEECS
T ss_pred ---------HHHHHHHHh------CCCCEEEEECCCCCHHHHHHHHHhcCcEEEEEec
Confidence 123344544 3589999998853 333455556888777643
No 51
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=75.20 E-value=15 Score=28.77 Aligned_cols=32 Identities=19% Similarity=0.463 Sum_probs=27.8
Q ss_pred CCCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 044384 11 GPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (322)
Q Consensus 11 ~p~~gH~~p~~~la~~La~rGh~VT~it~~~~ 42 (322)
-.|-|-..-...||..|+++|++|.++-..+.
T Consensus 10 kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 10 KGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 35679999999999999999999999987644
No 52
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=74.90 E-value=16 Score=32.45 Aligned_cols=105 Identities=21% Similarity=0.177 Sum_probs=56.5
Q ss_pred CCCCcChHHHHHHHHHHHhCCCEEEEEeCccchh-hHHhhhccCCCCCCCeEEEecCCC-CCCCCCCCCHHHHHHHHHHH
Q 044384 11 GPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHK-RVVESLQGKNYLEEQIRLVSIPDG-MEPWEDRNDFGKLIEKFLQV 88 (322)
Q Consensus 11 ~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~-~~~~~~~~~~~~~~~i~~~~i~~~-~~~~~~~~~~~~~~~~~~~~ 88 (322)
+...--++-|.++.++|.++ ++..++.|..... .+....- .++.+ .-|+. +... . .........
T Consensus 16 ~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~------~~~~i-~~~~~~l~~~-~-~~~~~~~~~---- 81 (385)
T 4hwg_A 16 VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF------DDMGI-RKPDYFLEVA-A-DNTAKSIGL---- 81 (385)
T ss_dssp ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH------C-CCC-CCCSEECCCC-C-CCSHHHHHH----
T ss_pred EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH------hhCCC-CCCceecCCC-C-CCHHHHHHH----
Confidence 35567888899999999887 8988777653322 2222110 11111 01111 1111 1 111221111
Q ss_pred chHHHHHHHHHHhccCCCCccEEEe--cCCcchHHHHHHHcCCceEEEc
Q 044384 89 MPRKLEELIEEINSREDEKIDCFIA--DGNMGWSLEVAKKMNVRGGVFW 135 (322)
Q Consensus 89 ~~~~~~~ll~~l~~~~~~~~d~vI~--D~~~~~~~~vA~~l~iP~i~~~ 135 (322)
+-..+.+++++ .+||+||+ |....++...|.++|||.+.+.
T Consensus 82 ~~~~l~~~l~~------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~e 124 (385)
T 4hwg_A 82 VIEKVDEVLEK------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHME 124 (385)
T ss_dssp HHHHHHHHHHH------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHh------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEe
Confidence 22335666766 56897776 4445566778889999977654
No 53
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=73.82 E-value=24 Score=30.14 Aligned_cols=38 Identities=21% Similarity=0.502 Sum_probs=31.0
Q ss_pred CeEEEEcC--CCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 4 PHVLVMPG--PAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 4 ~hv~~~p~--p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
.+++++.. ++-|-..-...||..||++|.+|-+|-...
T Consensus 104 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 104 NNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp CCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 35555554 577999999999999999999999997654
No 54
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=73.64 E-value=2.7 Score=31.01 Aligned_cols=30 Identities=30% Similarity=0.051 Sum_probs=21.3
Q ss_pred CCccEEEecCCcc--hHHHHHHH---cCCceEEEc
Q 044384 106 EKIDCFIADGNMG--WSLEVAKK---MNVRGGVFW 135 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~---l~iP~i~~~ 135 (322)
.+||+||+|..++ .+..++++ .++|.|.++
T Consensus 52 ~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 5799999999986 34556555 477866543
No 55
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=71.65 E-value=4.4 Score=30.27 Aligned_cols=35 Identities=14% Similarity=0.200 Sum_probs=25.6
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccchHH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-------NVRGGVFWSSSAA 140 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~~~ 140 (322)
.+||+||+|..++ .+..+++++ ++|.|.+++.+..
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~ 99 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKR 99 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCCH
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCCH
Confidence 4699999999987 466777665 4787777665443
No 56
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=71.65 E-value=7.2 Score=32.62 Aligned_cols=28 Identities=21% Similarity=0.216 Sum_probs=21.5
Q ss_pred ChHHHHHHHHHHHhCCCEEEEEeCccchh
Q 044384 16 HVIPLLEFSQCLAKHGFRVTFVNTDYYHK 44 (322)
Q Consensus 16 H~~p~~~la~~La~rGh~VT~it~~~~~~ 44 (322)
|--=+..|.+.|.+.| +|+++.+..+..
T Consensus 13 ~apGi~aL~~~l~~~g-~V~VVAP~~~~S 40 (251)
T 2phj_A 13 FSPGINALREALKSLG-RVVVVAPDRNLS 40 (251)
T ss_dssp TCHHHHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred CCHHHHHHHHHHHhcC-CEEEEecCCCcc
Confidence 3345778899999888 999999876543
No 57
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=65.22 E-value=3.1 Score=37.00 Aligned_cols=44 Identities=7% Similarity=-0.025 Sum_probs=31.9
Q ss_pred ccccccCCCCCCcEEEEecCCcccC--CHHHHHHHHHcc-------eeeecCC
Q 044384 258 NCLKWLDQQQPSSVIYAAFGSLTIL--DQVQFQEFVDAR-------FWLRLPT 301 (322)
Q Consensus 258 ~~~~wLd~~~~~sVIYvSfGS~~~l--~~~q~~ela~~l-------lWv~r~~ 301 (322)
...+|++..+.+.+|||++||.... ..+.+.+++.+| +|+..++
T Consensus 221 ~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~ 273 (398)
T 3oti_A 221 VLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDL 273 (398)
T ss_dssp ECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTS
T ss_pred CCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCc
Confidence 4557887666678999999998643 556677777776 7776554
No 58
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=62.97 E-value=12 Score=29.29 Aligned_cols=40 Identities=15% Similarity=0.058 Sum_probs=29.8
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchh
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHK 44 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~ 44 (322)
.||++.-..+ +...-...+.++|.++|++|+++.+..-.+
T Consensus 6 k~IllgvTGs-~aa~k~~~ll~~L~~~g~~V~vv~T~~A~~ 45 (175)
T 3qjg_A 6 ENVLICLCGS-VNSINISHYIIELKSKFDEVNVIASTNGRK 45 (175)
T ss_dssp CEEEEEECSS-GGGGGHHHHHHHHTTTCSEEEEEECTGGGG
T ss_pred CEEEEEEeCH-HHHHHHHHHHHHHHHCCCEEEEEECcCHHH
Confidence 3666555444 444458899999999999999999875543
No 59
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=62.28 E-value=20 Score=29.72 Aligned_cols=34 Identities=15% Similarity=0.267 Sum_probs=27.3
Q ss_pred eEEEEc--CCCCcChHHHHHHHHHHHhCCCEEEEEe
Q 044384 5 HVLVMP--GPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (322)
Q Consensus 5 hv~~~p--~p~~gH~~p~~~la~~La~rGh~VT~it 38 (322)
+.+++. -.+-|-......|++.|.++|.+|.++=
T Consensus 22 k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 22 HMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp EEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 444444 3566999999999999999999999974
No 60
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=61.73 E-value=12 Score=26.52 Aligned_cols=34 Identities=18% Similarity=0.036 Sum_probs=23.8
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-------NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+++++ ++|.++++....
T Consensus 45 ~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 87 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87 (122)
T ss_dssp BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCS
T ss_pred cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCc
Confidence 5699999998875 455666554 478777766543
No 61
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=60.57 E-value=66 Score=27.11 Aligned_cols=39 Identities=21% Similarity=0.386 Sum_probs=31.4
Q ss_pred CeEEEEc--CCCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 044384 4 PHVLVMP--GPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (322)
Q Consensus 4 ~hv~~~p--~p~~gH~~p~~~la~~La~rGh~VT~it~~~~ 42 (322)
.++++|. -++-|-......||..||++|.+|-+|-....
T Consensus 92 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 92 NNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp CCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 3555555 35779999999999999999999999977643
No 62
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=58.79 E-value=69 Score=25.94 Aligned_cols=37 Identities=14% Similarity=0.258 Sum_probs=29.6
Q ss_pred eEEEEc--CCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 5 HVLVMP--GPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 5 hv~~~p--~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
+++.+. -.|-|-..-...||..|+++|++|-++=...
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 344443 3466999999999999999999999987654
No 63
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=57.83 E-value=20 Score=28.94 Aligned_cols=43 Identities=16% Similarity=0.192 Sum_probs=32.1
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhH
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRV 46 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~ 46 (322)
+.||++--..+.|-+. ...|.++|.++|++|.++.|..-.+.+
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi 46 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVM 46 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHH
Confidence 3466666555555555 889999999999999999997655444
No 64
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=57.23 E-value=62 Score=24.67 Aligned_cols=39 Identities=23% Similarity=0.239 Sum_probs=34.2
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
+.++++...++-.|-+-..-++..|..+|++|.++-..-
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~ 56 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQ 56 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBC
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 468888888999999999999999999999999876543
No 65
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=56.82 E-value=15 Score=30.15 Aligned_cols=39 Identities=18% Similarity=0.286 Sum_probs=34.1
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
+.++++.--||-|-..-++.+|.+|+++|++|.++...+
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 346777778889999999999999999999999888765
No 66
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=55.76 E-value=24 Score=28.25 Aligned_cols=43 Identities=16% Similarity=0.078 Sum_probs=36.4
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhh
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKR 45 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~ 45 (322)
+.++++.+.++-.|-+...-++..|..+|++|.++...-..+.
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~ 130 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGK 130 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 3579999999999999999999999999999998876543333
No 67
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=54.23 E-value=20 Score=25.89 Aligned_cols=34 Identities=12% Similarity=0.065 Sum_probs=23.0
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-------NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+++++ ++|.++++....
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~ 89 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGD 89 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCC
Confidence 5699999998875 345555443 577777766543
No 68
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=53.09 E-value=22 Score=28.79 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=31.9
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhh
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKR 45 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~ 45 (322)
+.||++.-..+.+-+. ...+.++|.++| +|.++.+..-.+.
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~f 59 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHF 59 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGT
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHh
Confidence 4578777777766655 889999999999 9999998755443
No 69
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=51.29 E-value=54 Score=29.24 Aligned_cols=26 Identities=15% Similarity=0.346 Sum_probs=18.5
Q ss_pred CCccEEEe--cCCcchHHHHHHHcCCce
Q 044384 106 EKIDCFIA--DGNMGWSLEVAKKMNVRG 131 (322)
Q Consensus 106 ~~~d~vI~--D~~~~~~~~vA~~l~iP~ 131 (322)
.++|.|++ |.....+..+|++||+|.
T Consensus 74 ~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 74 FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 57898885 333345567899999983
No 70
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=50.85 E-value=22 Score=25.71 Aligned_cols=33 Identities=15% Similarity=0.416 Sum_probs=24.5
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
.+|++++ |.|.+ -..+++.|.++||+|+++...
T Consensus 4 ~m~i~Ii---G~G~i--G~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIA---GIGRV--GYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEE---CCSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE---CCCHH--HHHHHHHHHhCCCeEEEEECC
Confidence 3577777 44655 456889999999999998764
No 71
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=50.27 E-value=22 Score=28.57 Aligned_cols=39 Identities=21% Similarity=0.053 Sum_probs=29.7
Q ss_pred CCeEEEEcCCCCcChH-HHHHHHHHHHhCCCEEEEEeCccc
Q 044384 3 SPHVLVMPGPAQGHVI-PLLEFSQCLAKHGFRVTFVNTDYY 42 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~-p~~~la~~La~rGh~VT~it~~~~ 42 (322)
..||++--. |.+... =...+.++|.++|++|+++.+..-
T Consensus 7 ~k~I~lgiT-Gs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 7 GKHVGFGLT-GSHCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp TCEEEEECC-SCGGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCEEEEEEE-ChHHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 446665544 446666 789999999999999999988643
No 72
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=50.16 E-value=19 Score=28.43 Aligned_cols=43 Identities=16% Similarity=0.117 Sum_probs=30.5
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhh
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKR 45 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~ 45 (322)
|.+ ||++.-..+ +...=...+.++|.++|++|.++.+..-.+.
T Consensus 1 ~~k-~IllgvTGs-~aa~k~~~l~~~L~~~g~~V~vv~T~~A~~f 43 (181)
T 1g63_A 1 MYG-KLLICATAS-INVININHYIVELKQHFDEVNILFSPSSKNF 43 (181)
T ss_dssp CCC-CEEEEECSC-GGGGGHHHHHHHHTTTSSCEEEEECGGGGGT
T ss_pred CCC-EEEEEEECH-HHHHHHHHHHHHHHHCCCEEEEEEchhHHHH
Confidence 444 555554444 4444678999999999999999998765443
No 73
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=50.08 E-value=16 Score=26.84 Aligned_cols=33 Identities=15% Similarity=0.140 Sum_probs=25.5
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
.|++++ |.|. --..+++.|.++||+|+++...+
T Consensus 7 ~~v~I~---G~G~--iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVI---GSEA--AGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEE---CCSH--HHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEE---CCCH--HHHHHHHHHHHCCCeEEEEECCH
Confidence 478877 3465 46789999999999999987643
No 74
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=49.91 E-value=34 Score=28.51 Aligned_cols=38 Identities=18% Similarity=0.158 Sum_probs=34.3
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
+.++++.+.++-.|-+...-++..|..+|++|.++...
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 45899999999999999999999999999999988654
No 75
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=49.47 E-value=31 Score=27.38 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=32.5
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHH
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVV 47 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~ 47 (322)
||++.-..+.|-+ =...+.++|.++|++|.++.|..-.+.+.
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~ 44 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK 44 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence 6777776666644 57889999999999999999976554443
No 76
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=49.34 E-value=27 Score=24.40 Aligned_cols=34 Identities=12% Similarity=0.062 Sum_probs=22.9
Q ss_pred CCccEEEecCCcc--hHHHHHHH----cCCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKK----MNVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~----l~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..++++ .++|.++++....
T Consensus 45 ~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~ 84 (120)
T 3f6p_A 45 LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDS 84 (120)
T ss_dssp TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 5699999998875 34444443 4678777765543
No 77
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=48.89 E-value=4.5 Score=35.86 Aligned_cols=45 Identities=11% Similarity=0.160 Sum_probs=25.4
Q ss_pred CccccccCCCCCCcEEEEecCCcccC--------CHHHHHHHHHcc-------eeeecCC
Q 044384 257 SNCLKWLDQQQPSSVIYAAFGSLTIL--------DQVQFQEFVDAR-------FWLRLPT 301 (322)
Q Consensus 257 ~~~~~wLd~~~~~sVIYvSfGS~~~l--------~~~q~~ela~~l-------lWv~r~~ 301 (322)
.++.+|++..+.+.+|||++||.... ..+.+++++.+| +|+...+
T Consensus 215 ~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~ 274 (398)
T 4fzr_A 215 DQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDK 274 (398)
T ss_dssp CCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC-
T ss_pred CCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 34667887655678999999998632 345677777776 6665543
No 78
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=48.14 E-value=22 Score=29.65 Aligned_cols=35 Identities=29% Similarity=0.338 Sum_probs=26.5
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
|++++|++.- + | .--.+|+++|+++||+|+.++-.
T Consensus 1 M~~~~ilVtG--a-G--~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAG--C-G--DLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEEC--C-S--HHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEEC--C-C--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 6767788773 3 5 45678999999999999988754
No 79
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=47.33 E-value=17 Score=32.07 Aligned_cols=36 Identities=8% Similarity=0.116 Sum_probs=27.5
Q ss_pred eEEEEc--CC-CCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 5 HVLVMP--GP-AQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 5 hv~~~p--~p-~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
+|+++. +| ..|.-.-...|+++|+++ |+|++++...
T Consensus 2 kI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~ 40 (413)
T 3oy2_A 2 KLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHA 40 (413)
T ss_dssp EEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESC
T ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecC
Confidence 466653 23 357778889999999999 9999988653
No 80
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=47.03 E-value=24 Score=25.67 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=22.6
Q ss_pred CCccEEEecCCcc--hHHHHHHHc---------CCceEEEccch
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM---------NVRGGVFWSSS 138 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l---------~iP~i~~~~~~ 138 (322)
.+||+||+|..++ .+..+++++ .+|.++++...
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 5699999998875 355665544 26777776543
No 81
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=46.51 E-value=32 Score=25.77 Aligned_cols=89 Identities=13% Similarity=0.064 Sum_probs=49.4
Q ss_pred cChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCCCCCCCHHHHHHHHHHHchHHHH
Q 044384 15 GHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWEDRNDFGKLIEKFLQVMPRKLE 94 (322)
Q Consensus 15 gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (322)
..-.-+++++++|.+.|+++ +.|....+.+.. .++....+.... ++.. ....+.+.
T Consensus 34 ~dK~~l~~~a~~l~~lGf~i--~AT~GTa~~L~~---------~Gi~v~~v~k~~-egg~------------~~~~~~i~ 89 (143)
T 2yvq_A 34 SFRPRFLGVAEQLHNEGFKL--FATEATSDWLNA---------NNVPATPVAWPS-QEGQ------------NPSLSSIR 89 (143)
T ss_dssp GGHHHHHHHHHHHHTTTCEE--EEEHHHHHHHHH---------TTCCCEEECCGG-GC-----------------CBCHH
T ss_pred cchHHHHHHHHHHHHCCCEE--EECchHHHHHHH---------cCCeEEEEEecc-CCCc------------ccccccHH
Confidence 34566889999999999864 455555544433 234444433211 0000 00003355
Q ss_pred HHHHHHhccCCCCccEEEecCCc--------chHHHHHHHcCCceEE
Q 044384 95 ELIEEINSREDEKIDCFIADGNM--------GWSLEVAKKMNVRGGV 133 (322)
Q Consensus 95 ~ll~~l~~~~~~~~d~vI~D~~~--------~~~~~vA~~l~iP~i~ 133 (322)
+++++ .++|+||.=.-- ......|-.+|||++.
T Consensus 90 d~i~~------g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 90 KLIRD------GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp HHHHT------TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred HHHHC------CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 55554 679999984432 1223568889999663
No 82
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=45.62 E-value=27 Score=28.19 Aligned_cols=40 Identities=10% Similarity=-0.059 Sum_probs=28.2
Q ss_pred CCeEEEEcCCCCcChHH-HHHHHHHHHhCCCEEEEEeCccch
Q 044384 3 SPHVLVMPGPAQGHVIP-LLEFSQCLAKHGFRVTFVNTDYYH 43 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p-~~~la~~La~rGh~VT~it~~~~~ 43 (322)
..||++--..+ +...- ...+.++|.++|++|.++.|..-.
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 45676655444 55554 789999999999999999886443
No 83
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=44.67 E-value=37 Score=27.11 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=30.0
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhC-CCEEEEEeCccchhhH
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYYHKRV 46 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~r-Gh~VT~it~~~~~~~~ 46 (322)
+|++--..+.|- .-...+.++|.++ |++|.++.|..-.+.+
T Consensus 2 ~IllgvTGsiaa-~k~~~ll~~L~~~~g~~V~vv~T~~A~~fi 43 (197)
T 1sbz_A 2 KLIVGMTGATGA-PLGVALLQALREMPNVETHLVMSKWAKTTI 43 (197)
T ss_dssp EEEEEECSSSCH-HHHHHHHHHHHTCTTCEEEEEECHHHHHHH
T ss_pred EEEEEEeChHHH-HHHHHHHHHHHhccCCEEEEEECchHHHHh
Confidence 455555445444 4589999999999 9999999987655444
No 84
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=44.21 E-value=15 Score=30.94 Aligned_cols=33 Identities=30% Similarity=0.361 Sum_probs=23.3
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
||++.- |.|.+ -.+|+++|.++||+|+.++-.+
T Consensus 2 kILVTG--atGfI--G~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 2 RVLVGG--GTGFI--GTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp EEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEECCC
Confidence 455443 34433 3678999999999999987643
No 85
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=44.13 E-value=1e+02 Score=26.98 Aligned_cols=37 Identities=16% Similarity=0.142 Sum_probs=31.5
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 044384 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (322)
Q Consensus 6 v~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~ 42 (322)
++++-.|+.|-..-+++++..++.+|..|.++++...
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s 100 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHA 100 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 4556678889999999999999999999999988754
No 86
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=42.86 E-value=23 Score=28.61 Aligned_cols=42 Identities=24% Similarity=0.186 Sum_probs=28.7
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHh-CCCEEEEEeCccchhh
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYYHKR 45 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~-rGh~VT~it~~~~~~~ 45 (322)
+.||++.-..+.+ ..-...+.++|.+ +|++|.++.|....+.
T Consensus 19 ~k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A~~f 61 (206)
T 1qzu_A 19 KFHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERAKHF 61 (206)
T ss_dssp SEEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGGGGS
T ss_pred CCEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhHHHH
Confidence 3466665555544 5556899999998 8999999998755433
No 87
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=42.41 E-value=84 Score=27.60 Aligned_cols=35 Identities=11% Similarity=0.170 Sum_probs=24.6
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
|...+|+++- .|.. -+.+++.+.+.|++|.++...
T Consensus 5 ~~~~~ilI~g---~g~~--~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 5 YDNKRLLILG---AGRG--QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp -CCCEEEEEC---CCGG--GHHHHHHHHHHTCEEEEEECS
T ss_pred cCCCEEEEEC---CcHh--HHHHHHHHHHCCCEEEEEcCC
Confidence 3556787774 3322 466889999999999999754
No 88
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=42.27 E-value=58 Score=25.08 Aligned_cols=36 Identities=22% Similarity=0.289 Sum_probs=25.9
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
|+.+++++.- +.| .--.+++++|+++||+|+.++-.
T Consensus 1 M~~~~ilVtG--atG--~iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 1 MAVKKIAIFG--ATG--QTGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCCCEEEEES--TTS--HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEEc--CCc--HHHHHHHHHHHHCCCeEEEEEeC
Confidence 6655666653 333 34578999999999999988754
No 89
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=42.22 E-value=51 Score=26.56 Aligned_cols=43 Identities=14% Similarity=0.188 Sum_probs=36.4
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhh
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKR 45 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~ 45 (322)
+.++++.+.++-.|-+...-++..|..+|++|..+-..-..+.
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~ 134 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNEN 134 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHH
Confidence 4589999999999999999999999999999999866533333
No 90
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=42.01 E-value=22 Score=26.55 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=28.0
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccch
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~ 43 (322)
+++++. |..=+.|++.+++.|+++|.+|+++ .....
T Consensus 20 ~~llIa--GG~GiaPl~sm~~~l~~~~~~v~l~-g~R~~ 55 (142)
T 3lyu_A 20 KILAIG--AYTGIVEVYPIAKAWQEIGNDVTTL-HVTFE 55 (142)
T ss_dssp EEEEEE--ETTHHHHHHHHHHHHHHTTCEEEEE-EEEEG
T ss_pred eEEEEE--CcCcHHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 455553 5555899999999999999999999 65443
No 91
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=41.98 E-value=20 Score=28.63 Aligned_cols=40 Identities=8% Similarity=-0.009 Sum_probs=29.3
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchh
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHK 44 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~ 44 (322)
.||++.-..+.+ ..-...+.++|.++|++|.++.+..-.+
T Consensus 9 k~IllgvTGs~a-a~k~~~l~~~L~~~g~~V~vv~T~~A~~ 48 (194)
T 1p3y_1 9 KKLLIGICGSIS-SVGISSYLLYFKSFFKEIRVVMTKTAED 48 (194)
T ss_dssp CEEEEEECSCGG-GGGTHHHHHHHTTTSSEEEEEECHHHHH
T ss_pred CEEEEEEECHHH-HHHHHHHHHHHHHCCCEEEEEEchhHHH
Confidence 466655554444 4457899999999999999999875443
No 92
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=41.22 E-value=47 Score=28.14 Aligned_cols=39 Identities=18% Similarity=0.158 Sum_probs=23.9
Q ss_pred CCCCeEEEE-cCCCCcChHH--HHHHHHHHHhCCCEEEEEeC
Q 044384 1 MSSPHVLVM-PGPAQGHVIP--LLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 1 m~~~hv~~~-p~p~~gH~~p--~~~la~~La~rGh~VT~it~ 39 (322)
|+.+||+++ ..|-...++- ...+.+.|.++||+|+++--
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 555665544 4665543332 34567788889999998743
No 93
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=40.50 E-value=21 Score=29.35 Aligned_cols=21 Identities=19% Similarity=0.322 Sum_probs=18.5
Q ss_pred HHHHHHHHHhCCCEEEEEeCc
Q 044384 20 LLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 20 ~~~la~~La~rGh~VT~it~~ 40 (322)
-.++|++++++|++||+++..
T Consensus 32 G~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 32 GKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp HHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999999875
No 94
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=40.34 E-value=42 Score=24.66 Aligned_cols=37 Identities=8% Similarity=0.038 Sum_probs=26.0
Q ss_pred eEEEEcCCC---CcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 5 HVLVMPGPA---QGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 5 hv~~~p~p~---~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
+++++-.-+ ......-+.+|...++.||+|+++-+..
T Consensus 17 kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~d 56 (134)
T 3mc3_A 17 XILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIX 56 (134)
T ss_dssp EEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred eEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeC
Confidence 555554433 4566677777888888999999887754
No 95
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=39.54 E-value=51 Score=22.95 Aligned_cols=34 Identities=15% Similarity=0.194 Sum_probs=22.4
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.++|+||+|..++ .+..+.+++ ++|.++++....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (126)
T 1dbw_A 46 VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGD 86 (126)
T ss_dssp CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 4689999998765 344554443 567777765443
No 96
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=39.51 E-value=32 Score=28.86 Aligned_cols=41 Identities=20% Similarity=0.323 Sum_probs=31.2
Q ss_pred CCCCeEEEEcC--CCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 1 MSSPHVLVMPG--PAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 1 m~~~hv~~~p~--p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
|+.++++.|.. .|-|-..-...||..|+++|.+|.++=...
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 55555666643 466999999999999999999999987665
No 97
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=39.50 E-value=43 Score=24.61 Aligned_cols=34 Identities=15% Similarity=0.033 Sum_probs=22.3
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-------NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+++.+ ++|.|++.....
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~ 92 (154)
T 3gt7_A 50 TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSD 92 (154)
T ss_dssp CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCCS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCCC
Confidence 5699999998764 344554432 577777765443
No 98
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=38.78 E-value=45 Score=29.41 Aligned_cols=39 Identities=13% Similarity=0.118 Sum_probs=33.3
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchh
Q 044384 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHK 44 (322)
Q Consensus 6 v~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~ 44 (322)
+++.--|+.|-..-.++++..++.+|..|.|+++.....
T Consensus 77 i~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~~ 115 (366)
T 1xp8_A 77 TEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALD 115 (366)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCChh
Confidence 556677899999999999999999999999999976443
No 99
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=37.98 E-value=59 Score=26.77 Aligned_cols=41 Identities=29% Similarity=0.475 Sum_probs=27.3
Q ss_pred CCCCeEEEEcCCCCc-----------ChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 1 MSSPHVLVMPGPAQG-----------HVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 1 m~~~hv~~~p~p~~g-----------H~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
|..++|+++-....+ ...=+..-...|.+.|++|+++++..
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 666778887764322 22456666777888999999999753
No 100
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=37.82 E-value=2.3e+02 Score=26.16 Aligned_cols=39 Identities=15% Similarity=0.246 Sum_probs=26.1
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHh
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVE 48 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~ 48 (322)
+-+++.. ++-.-+..+++.|.+.|++| ++|....+.+..
T Consensus 11 ~~aLISV---sDK~glvelAk~L~~lGfeI--~ATgGTak~L~e 49 (523)
T 3zzm_A 11 RRALISV---YDKTGLVDLAQGLSAAGVEI--ISTGSTAKTIAD 49 (523)
T ss_dssp CEEEEEE---SSCTTHHHHHHHHHHTTCEE--EECHHHHHHHHT
T ss_pred cEEEEEE---eccccHHHHHHHHHHCCCEE--EEcchHHHHHHH
Confidence 4455554 34455789999999999776 466666655544
No 101
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=37.80 E-value=23 Score=28.19 Aligned_cols=43 Identities=19% Similarity=0.291 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhccCCCCccEEEecCCcchHHHHHHHcCCceEEEccchH
Q 044384 91 RKLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGGVFWSSSA 139 (322)
Q Consensus 91 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~~~~ 139 (322)
+.+++.++++.+ ..+++||.|.. +..+|+++|+|.+.+.++--
T Consensus 129 ~e~~~~i~~l~~---~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 129 DEITTLISKVKT---ENIKIVVSGKT---VTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp GGHHHHHHHHHH---TTCCEEEECHH---HHHHHHHTTCEEEECCCCHH
T ss_pred HHHHHHHHHHHH---CCCeEEECCHH---HHHHHHHcCCcEEEEecCHH
Confidence 456777777765 46999999854 57899999999998877443
No 102
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=37.77 E-value=58 Score=26.84 Aligned_cols=30 Identities=7% Similarity=-0.193 Sum_probs=21.0
Q ss_pred CCccEEEecCCcchHH-HHHHHcCCceEEEc
Q 044384 106 EKIDCFIADGNMGWSL-EVAKKMNVRGGVFW 135 (322)
Q Consensus 106 ~~~d~vI~D~~~~~~~-~vA~~l~iP~i~~~ 135 (322)
..+|+||+-.+...+. .+.+.+++|.+.+.
T Consensus 68 ~g~d~iviaCnt~~~l~~lr~~~~iPvigi~ 98 (245)
T 3qvl_A 68 QGVDGHVIASFGDPGLLAARELAQGPVIGIA 98 (245)
T ss_dssp HTCSEEEEC-CCCTTHHHHHHHCSSCEEEHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHcCCCEECcc
Confidence 3589999998864344 56667899988763
No 103
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=37.25 E-value=58 Score=23.22 Aligned_cols=32 Identities=13% Similarity=0.048 Sum_probs=21.4
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccc
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-------NVRGGVFWSS 137 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-------~iP~i~~~~~ 137 (322)
.+||+||+|..++ .+..+++.+ ++|.++++..
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 4689999998875 345555443 4677776554
No 104
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=37.01 E-value=57 Score=22.96 Aligned_cols=39 Identities=10% Similarity=0.122 Sum_probs=30.5
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
|++.+|+++...|.|=-.-...+-+.+.++|.++.+...
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 777789999988887667777777777889988776543
No 105
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=36.26 E-value=66 Score=21.83 Aligned_cols=32 Identities=25% Similarity=0.187 Sum_probs=20.7
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccc
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSS 137 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~ 137 (322)
.+||+||.|..++ .+..+.+.+ ++|.+.++..
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 44 GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 4699999998764 344444443 4676666543
No 106
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=35.74 E-value=15 Score=30.05 Aligned_cols=42 Identities=21% Similarity=0.134 Sum_probs=26.6
Q ss_pred HHHHHHHHHhccCCCCccEEEecCCcch---HHHHHHHc----CCceEEEccc
Q 044384 92 KLEELIEEINSREDEKIDCFIADGNMGW---SLEVAKKM----NVRGGVFWSS 137 (322)
Q Consensus 92 ~~~~ll~~l~~~~~~~~d~vI~D~~~~~---~~~vA~~l----~iP~i~~~~~ 137 (322)
.+.++++++. .+||+|++|-.... ..++|.++ |+|.|++.=+
T Consensus 92 ~~l~al~~L~----~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 92 LFLKAWEKLR----TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp HHHHHHTTCC----SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred HHHHHHHhcC----CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 3445555543 46999999976432 34555554 8899987533
No 107
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=35.45 E-value=55 Score=23.86 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=22.2
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+++.+ ++|.|++.....
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 50 TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999998764 344444433 578777765544
No 108
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=35.34 E-value=21 Score=28.65 Aligned_cols=19 Identities=26% Similarity=0.363 Sum_probs=16.5
Q ss_pred HHHHHHHHHhCCCEEEEEe
Q 044384 20 LLEFSQCLAKHGFRVTFVN 38 (322)
Q Consensus 20 ~~~la~~La~rGh~VT~it 38 (322)
-+.+|..|+++|++||++=
T Consensus 14 GL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 14 GLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEE
Confidence 4778899999999999983
No 109
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=35.24 E-value=1.7e+02 Score=23.21 Aligned_cols=41 Identities=22% Similarity=0.195 Sum_probs=31.1
Q ss_pred EEEEcCCCCcChHHHHHHHHHHH-hCCCEEEEEeCccchhhH
Q 044384 6 VLVMPGPAQGHVIPLLEFSQCLA-KHGFRVTFVNTDYYHKRV 46 (322)
Q Consensus 6 v~~~p~p~~gH~~p~~~la~~La-~rGh~VT~it~~~~~~~~ 46 (322)
+++.--||.|-..-.++++...+ +.|..|.+++.......+
T Consensus 33 ~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~ 74 (251)
T 2zts_A 33 VLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDL 74 (251)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHH
Confidence 45666789999999999987754 557889999887654443
No 110
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=34.58 E-value=27 Score=30.17 Aligned_cols=35 Identities=17% Similarity=0.124 Sum_probs=25.8
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
|..++|+++- .|. .-..++..|++.||+||++...
T Consensus 1 M~~mkI~IiG---aG~--~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 1 MSLTRICIVG---AGA--VGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp -CCCCEEEES---CCH--HHHHHHHHHHHTTCCEEEECCH
T ss_pred CCCCEEEEEC---cCH--HHHHHHHHHHHCCCEEEEEECh
Confidence 6667888884 442 3356788999999999999864
No 111
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=34.52 E-value=1.7e+02 Score=23.57 Aligned_cols=22 Identities=23% Similarity=0.243 Sum_probs=18.1
Q ss_pred HHHHHHHHHHhCCCEEEEEeCc
Q 044384 19 PLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 19 p~~~la~~La~rGh~VT~it~~ 40 (322)
--.+++++|+++|++|+++...
T Consensus 14 IG~~ia~~l~~~G~~V~~~~r~ 35 (258)
T 3a28_C 14 IGRGISEKLAADGFDIAVADLP 35 (258)
T ss_dssp HHHHHHHHHHHHTCEEEEEECG
T ss_pred HHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999999999999887654
No 112
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=34.38 E-value=60 Score=23.31 Aligned_cols=31 Identities=10% Similarity=0.104 Sum_probs=20.0
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEcc
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWS 136 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~ 136 (322)
.+||+||+|.-++ .+..+++++ ++|.|+++.
T Consensus 48 ~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 48 HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 4699999998764 345555443 466666544
No 113
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=34.14 E-value=72 Score=22.53 Aligned_cols=34 Identities=15% Similarity=0.102 Sum_probs=21.9
Q ss_pred CCccEEEecCCcc-------hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG-------WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~-------~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.++|+||+|.-++ .+..+.+.+ ++|.|++.....
T Consensus 46 ~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 91 (140)
T 2qr3_A 46 ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYAD 91 (140)
T ss_dssp SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGG
T ss_pred CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 5699999997754 234443332 578887765544
No 114
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=34.11 E-value=52 Score=22.59 Aligned_cols=34 Identities=21% Similarity=0.090 Sum_probs=22.2
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.++|+||.|..++ .+..+++++ ++|.+.++....
T Consensus 46 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (120)
T 1tmy_A 46 LKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQ 86 (120)
T ss_dssp HCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCC
Confidence 3589999998875 344555443 577777665543
No 115
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=34.02 E-value=55 Score=23.34 Aligned_cols=33 Identities=24% Similarity=0.320 Sum_probs=21.3
Q ss_pred CCccEEEecCCcch--HHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMGW--SLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|. ++. +..+.+.+ ++|.|++.....
T Consensus 47 ~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~~ 86 (142)
T 2qxy_A 47 EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYVD 86 (142)
T ss_dssp SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCCC
T ss_pred cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCCC
Confidence 5699999999 642 33444332 578887765543
No 116
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=34.01 E-value=55 Score=28.82 Aligned_cols=35 Identities=23% Similarity=0.410 Sum_probs=25.9
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
|.+.+++++- .| ..-+..|.+|+++|++||++-..
T Consensus 1 m~~~~v~iiG---~G--~~Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 1 MKSKKILIVG---AG--FSGAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp -CCCEEEEEC---CS--HHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCcCCEEEEC---cC--HHHHHHHHHHHHCCCcEEEEEec
Confidence 6677888773 33 34677899999999999998653
No 117
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=33.73 E-value=35 Score=30.07 Aligned_cols=38 Identities=11% Similarity=0.170 Sum_probs=27.5
Q ss_pred CCCCeEEEEcCCCCcC-----hHHHHHHHHHH-HhCCCEEEEEeC
Q 044384 1 MSSPHVLVMPGPAQGH-----VIPLLEFSQCL-AKHGFRVTFVNT 39 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH-----~~p~~~la~~L-a~rGh~VT~it~ 39 (322)
|.+++|+++- .|+|. +.....++++| .++||+|+.+..
T Consensus 1 m~k~~v~vl~-gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 1 MTKKRVALIF-GGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp --CEEEEEEE-ECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCCcEEEEEe-CCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 7777888775 34544 34578899999 999999999864
No 118
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=33.49 E-value=68 Score=22.45 Aligned_cols=32 Identities=16% Similarity=0.088 Sum_probs=20.2
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccc
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-------NVRGGVFWSS 137 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-------~iP~i~~~~~ 137 (322)
.+||+||+|..++ .+..+.+.+ ++|.|++...
T Consensus 46 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 5699999998764 344443322 5677766543
No 119
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=33.38 E-value=1.6e+02 Score=23.95 Aligned_cols=32 Identities=13% Similarity=0.126 Sum_probs=23.7
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
+++++.-.+.| --.+++++|+++|++|.++..
T Consensus 12 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 46666644443 457899999999999988753
No 120
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=33.30 E-value=71 Score=21.89 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=22.2
Q ss_pred CCccEEEecCCcc--hHHHHHHHc----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l----~iP~i~~~~~~~ 139 (322)
.+||+||+|.-++ .+..+++.+ ++|.++++....
T Consensus 45 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 84 (122)
T 1zgz_A 45 QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSD 84 (122)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCCC
Confidence 4699999998764 345555544 467766655443
No 121
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=33.21 E-value=58 Score=22.75 Aligned_cols=34 Identities=18% Similarity=0.101 Sum_probs=20.5
Q ss_pred CCccEEEecCCcch--HHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMGW--SLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++. +..+.+.+ ++|.+++.....
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~ 90 (130)
T 3eod_A 50 FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATEN 90 (130)
T ss_dssp CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCC
Confidence 56999999987642 33444332 578777766543
No 122
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=33.17 E-value=31 Score=29.89 Aligned_cols=35 Identities=26% Similarity=0.216 Sum_probs=24.5
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
|.+++|+++- .|.+ -..++..|+++||+|+++...
T Consensus 2 m~~mki~iiG---~G~~--G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLG---LGNG--GHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEEC---CSHH--HHHHHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEEC---CCHH--HHHHHHHHHhCCCEEEEEeCC
Confidence 5667888884 3432 345788899999999988654
No 123
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=33.10 E-value=67 Score=23.35 Aligned_cols=34 Identities=6% Similarity=0.104 Sum_probs=22.4
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+.+++ ++|.|++.....
T Consensus 57 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 97 (153)
T 3hv2_A 57 REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPD 97 (153)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCC
T ss_pred CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCC
Confidence 5699999998864 344444433 577777765543
No 124
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=32.93 E-value=75 Score=22.24 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=22.6
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-------NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~~ 139 (322)
.++|+||+|..++ .+..+++.+ ++|.++++....
T Consensus 50 ~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~~ 92 (129)
T 3h1g_A 50 ADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEGG 92 (129)
T ss_dssp TTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCCS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCCC
Confidence 3689999998875 345555543 467777765543
No 125
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=32.86 E-value=1.3e+02 Score=25.16 Aligned_cols=33 Identities=12% Similarity=-0.011 Sum_probs=23.0
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
+.+++.-.+. ---.+++++|+++|++|.++...
T Consensus 50 k~vlVTGas~---GIG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 50 RKALVTGGDS---GIGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp CEEEEETTTS---HHHHHHHHHHHHTTCEEEEECCG
T ss_pred CEEEEeCCCc---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4555654333 23578999999999999876543
No 126
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=32.68 E-value=57 Score=23.10 Aligned_cols=34 Identities=21% Similarity=0.025 Sum_probs=22.4
Q ss_pred CCccEEEecCCcc---hHHHHHHH----cCCceEEEccchH
Q 044384 106 EKIDCFIADGNMG---WSLEVAKK----MNVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~---~~~~vA~~----l~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+++. -++|.|++.....
T Consensus 53 ~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 53 LRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD 93 (140)
T ss_dssp HCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred CCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC
Confidence 3599999997663 34444444 3688887766544
No 127
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=32.61 E-value=39 Score=25.87 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=22.5
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+++.+ ++|.|+++....
T Consensus 50 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~~ 90 (184)
T 3rqi_A 50 EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYAS 90 (184)
T ss_dssp SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSCC
T ss_pred CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 5699999998875 344444432 577777766543
No 128
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=32.59 E-value=64 Score=22.55 Aligned_cols=29 Identities=7% Similarity=0.043 Sum_probs=22.4
Q ss_pred CcChHHHHHHHHHHHhC-CC-EEEEEeCccc
Q 044384 14 QGHVIPLLEFSQCLAKH-GF-RVTFVNTDYY 42 (322)
Q Consensus 14 ~gH~~p~~~la~~La~r-Gh-~VT~it~~~~ 42 (322)
.......+.++..+++. || +|+++-...-
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~dg 45 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMSDA 45 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECGGG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEchH
Confidence 34556678889999888 99 9999877543
No 129
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=32.49 E-value=63 Score=23.40 Aligned_cols=43 Identities=26% Similarity=0.225 Sum_probs=26.1
Q ss_pred HHHHHHHhccCCCCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 94 EELIEEINSREDEKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.++++.+.. .+||+||+|.-++ .+..+++.+ ++|.|++.....
T Consensus 56 ~~al~~l~~---~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 105 (150)
T 4e7p_A 56 QEAIQLLEK---ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKR 105 (150)
T ss_dssp HHHHHHHTT---SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHHHhhc---cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 344444432 5699999998764 344554432 577777765543
No 130
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=32.27 E-value=50 Score=23.38 Aligned_cols=34 Identities=21% Similarity=0.140 Sum_probs=22.0
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+++++ ++|.++++....
T Consensus 48 ~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 88 (133)
T 3b2n_A 48 YNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKR 88 (133)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCCC
Confidence 3589999998875 344554443 467777765443
No 131
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=32.09 E-value=63 Score=26.32 Aligned_cols=41 Identities=15% Similarity=0.299 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHhccCCCCccEEEecCCcchHHHHHHHcCCceEEEcc
Q 044384 90 PRKLEELIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGGVFWS 136 (322)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~ 136 (322)
.+.+++.++++.+ ..+++||.|.. +..+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~---~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKA---NGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHH---TTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHH---CCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 3567777877765 46999999854 57899999999998884
No 132
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=32.02 E-value=86 Score=27.43 Aligned_cols=37 Identities=14% Similarity=0.227 Sum_probs=32.2
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 044384 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (322)
Q Consensus 6 v~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~ 42 (322)
+++.--|+.|-..-.++++..++.+|..|.++++...
T Consensus 66 i~I~G~pGsGKTtLal~la~~~~~~g~~vlyid~E~s 102 (356)
T 1u94_A 66 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHA 102 (356)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5666678899999999999999999999999998654
No 133
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=31.90 E-value=33 Score=27.71 Aligned_cols=37 Identities=14% Similarity=0.054 Sum_probs=31.0
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
+|++..-.|-|=..-...||..|+++|++|-++-...
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4777555667999999999999999999999986654
No 134
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=31.78 E-value=65 Score=22.38 Aligned_cols=33 Identities=15% Similarity=0.041 Sum_probs=21.2
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccch
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-------NVRGGVFWSSS 138 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~ 138 (322)
.++|+||+|..++ .+..+++++ ++|.++++...
T Consensus 50 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 91 (129)
T 1p6q_A 50 NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQG 91 (129)
T ss_dssp SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCCC
Confidence 4699999998775 455665554 34555555443
No 135
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=31.53 E-value=76 Score=22.10 Aligned_cols=32 Identities=19% Similarity=0.102 Sum_probs=20.6
Q ss_pred CccEEEecCCcch---HHHHHHHc-----CCceEEEccch
Q 044384 107 KIDCFIADGNMGW---SLEVAKKM-----NVRGGVFWSSS 138 (322)
Q Consensus 107 ~~d~vI~D~~~~~---~~~vA~~l-----~iP~i~~~~~~ 138 (322)
+||+||+|..++. +..+++++ ++|.|++....
T Consensus 50 ~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 89 (132)
T 2rdm_A 50 AIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHA 89 (132)
T ss_dssp CCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred CCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCc
Confidence 6999999987642 44444433 57777765443
No 136
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=31.48 E-value=60 Score=22.15 Aligned_cols=34 Identities=29% Similarity=0.172 Sum_probs=22.3
Q ss_pred CCccEEEecCCcc--hHHHHHHH----cCCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKK----MNVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~----l~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+++. -++|.++++....
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (120)
T 2a9o_A 44 EQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDS 83 (120)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCS
T ss_pred CCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCc
Confidence 3589999998764 34444443 3678777766543
No 137
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=31.32 E-value=81 Score=22.47 Aligned_cols=33 Identities=18% Similarity=0.125 Sum_probs=21.6
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccch
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-------NVRGGVFWSSS 138 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~ 138 (322)
.+||+||+|..++ .+..+.+.+ ++|.|++....
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (144)
T 3kht_A 50 AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNV 91 (144)
T ss_dssp CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCC
Confidence 5699999998865 344444432 46777776543
No 138
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=31.08 E-value=63 Score=27.15 Aligned_cols=32 Identities=13% Similarity=0.073 Sum_probs=21.8
Q ss_pred CCccEEEecCCcc-h--HHHHH----HHcCCceEEEccc
Q 044384 106 EKIDCFIADGNMG-W--SLEVA----KKMNVRGGVFWSS 137 (322)
Q Consensus 106 ~~~d~vI~D~~~~-~--~~~vA----~~l~iP~i~~~~~ 137 (322)
.+||+||+|..++ . +..++ ...++|.|+++..
T Consensus 204 ~~~dlvl~D~~MPd~mdG~e~~~~ir~~~~~piI~lT~~ 242 (286)
T 3n0r_A 204 RTPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFITAF 242 (286)
T ss_dssp CCCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEEESC
T ss_pred CCCCEEEEcCCCCCCCCHHHHHHHHHhcCCCCEEEEeCC
Confidence 5699999999887 2 22222 2237898887664
No 139
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=30.89 E-value=29 Score=29.94 Aligned_cols=22 Identities=14% Similarity=0.188 Sum_probs=18.7
Q ss_pred HHHHHHHHHhCCCEEEEEeCcc
Q 044384 20 LLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 20 ~~~la~~La~rGh~VT~it~~~ 41 (322)
-.++|++++.+|++||+++.+.
T Consensus 68 G~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 68 GATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHHCCCEEEEEecCC
Confidence 4578899999999999998753
No 140
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=30.78 E-value=72 Score=27.66 Aligned_cols=34 Identities=26% Similarity=0.166 Sum_probs=23.4
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
|.+++|+|+ | --+.-.++.++|.++||+|..+.+
T Consensus 20 ~~~mrIvf~---G--~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 20 FQSMKIAVI---G--QSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp -CCCEEEEE---C--CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEE---c--CcHHHHHHHHHHHHCCCeEEEEEe
Confidence 455789988 2 223344577889999999987766
No 141
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=30.74 E-value=98 Score=22.05 Aligned_cols=40 Identities=10% Similarity=-0.015 Sum_probs=27.3
Q ss_pred CCCCeEEEEcCCCCcCh--HHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 1 MSSPHVLVMPGPAQGHV--IPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~--~p~~~la~~La~rGh~VT~it~~~ 41 (322)
|++ -++++..+-+|+. .-.+.++..+++.||+|+++-...
T Consensus 1 Mkk-~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~D 42 (119)
T 2d1p_B 1 MKR-IAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIAD 42 (119)
T ss_dssp CCC-EEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGG
T ss_pred CcE-EEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehH
Confidence 655 3444455555666 556778888888999999886653
No 142
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=30.49 E-value=55 Score=22.68 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=21.9
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|.-++ .+..+++++ ++|.+.++....
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (124)
T 1srr_A 46 ERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGE 86 (124)
T ss_dssp HCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccCc
Confidence 3589999998764 344544443 577777765443
No 143
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=30.48 E-value=33 Score=26.01 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=27.1
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccch
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~ 43 (322)
+++++. +..=+.|++.+++.|.++|.+|+++ ...+.
T Consensus 25 ~~llIa--GG~GItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 25 KILAIG--AYTGIVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp EEEEEE--ETTHHHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred eEEEEE--ccCcHHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 455553 3333899999999999999999999 65443
No 144
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=30.25 E-value=81 Score=21.98 Aligned_cols=33 Identities=18% Similarity=0.030 Sum_probs=20.7
Q ss_pred CCccEEEecCCcc--hHHHHHHHc------CCceEEEccch
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM------NVRGGVFWSSS 138 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l------~iP~i~~~~~~ 138 (322)
.+||+||+|..++ .+..+++.+ ..|.|++.+..
T Consensus 49 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~~ 89 (132)
T 3lte_A 49 FEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSGL 89 (132)
T ss_dssp TCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECCS
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeCC
Confidence 5699999998875 345555443 34556555543
No 145
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=30.18 E-value=77 Score=27.32 Aligned_cols=37 Identities=14% Similarity=0.036 Sum_probs=24.9
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~ 42 (322)
|++++|+|+-.|.. ..+..++|.++||+|..|.+.+.
T Consensus 5 ~~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~pd 41 (318)
T 3q0i_A 5 SQSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQPE 41 (318)
T ss_dssp --CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECCCC
T ss_pred ccCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcCCC
Confidence 56779998866533 23456778888999988777543
No 146
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=30.13 E-value=91 Score=21.33 Aligned_cols=34 Identities=24% Similarity=0.176 Sum_probs=22.1
Q ss_pred CCccEEEecCCcc--hHHHHHHHc----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l----~iP~i~~~~~~~ 139 (322)
.++|+||+|..++ .+..+++.+ ++|.+.++....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 85 (123)
T 1xhf_A 46 YDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDN 85 (123)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCCS
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCCC
Confidence 5699999998764 344444443 577777665443
No 147
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=29.77 E-value=83 Score=21.76 Aligned_cols=33 Identities=21% Similarity=0.121 Sum_probs=21.5
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccch
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-------NVRGGVFWSSS 138 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~ 138 (322)
.+||+||+|..++ .+..+++.+ .+|.+.++...
T Consensus 48 ~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~ 89 (128)
T 1jbe_A 48 GGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEA 89 (128)
T ss_dssp CCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCc
Confidence 4699999998875 355555543 35666665543
No 148
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=29.74 E-value=71 Score=22.46 Aligned_cols=33 Identities=9% Similarity=-0.020 Sum_probs=21.4
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccch
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSS 138 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~ 138 (322)
.++|+||.|..++ .+..+++.+ ++|.++++...
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (132)
T 3crn_A 46 EFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYA 85 (132)
T ss_dssp SCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCC
T ss_pred CCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccc
Confidence 4699999998764 344444433 56777766544
No 149
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=29.66 E-value=74 Score=22.53 Aligned_cols=33 Identities=9% Similarity=0.082 Sum_probs=21.4
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccch
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-------NVRGGVFWSSS 138 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~ 138 (322)
.+||+||+|..++ .+..+.+++ ++|.|++....
T Consensus 49 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 49 RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 5699999998764 344444432 56777665543
No 150
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=29.65 E-value=72 Score=22.68 Aligned_cols=34 Identities=12% Similarity=-0.021 Sum_probs=22.8
Q ss_pred CCccEEEecCCcc--hHHHHHHHc----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l----~iP~i~~~~~~~ 139 (322)
.+||+||.|..++ .+..+++.+ .+|.+++.....
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~~ 86 (136)
T 2qzj_A 47 NKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYINE 86 (136)
T ss_dssp CCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCCC
Confidence 5689999998764 345555543 578777765443
No 151
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=29.27 E-value=95 Score=23.55 Aligned_cols=41 Identities=27% Similarity=0.304 Sum_probs=29.0
Q ss_pred EEEEcCCCC-cChHHHHHHHHHHHhCCCEEEEEeCccchhhH
Q 044384 6 VLVMPGPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRV 46 (322)
Q Consensus 6 v~~~p~p~~-gH~~p~~~la~~La~rGh~VT~it~~~~~~~~ 46 (322)
++++-.|-. ..+-..+-++..|-++||+||+..++...+.+
T Consensus 10 LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLl 51 (157)
T 1kjn_A 10 LMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLV 51 (157)
T ss_dssp EEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred eEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhe
Confidence 444555654 44555677888999999999999887555444
No 152
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=29.25 E-value=85 Score=22.24 Aligned_cols=33 Identities=12% Similarity=0.139 Sum_probs=21.3
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccch
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSS 138 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~ 138 (322)
.++|+||+|..++ .+..+.+.+ ++|.|+++...
T Consensus 43 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (139)
T 2jk1_A 43 EWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYT 82 (139)
T ss_dssp SCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESCT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 4699999998875 344444433 46777665543
No 153
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=29.16 E-value=62 Score=25.10 Aligned_cols=32 Identities=16% Similarity=0.278 Sum_probs=21.9
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccc
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSS 137 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~ 137 (322)
.+||+||+|..++ .+..+++.+ ++|.|+++..
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 85 (208)
T 1yio_A 47 EQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAH 85 (208)
T ss_dssp TSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 5699999998875 445555443 5777777554
No 154
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=29.05 E-value=43 Score=27.39 Aligned_cols=22 Identities=23% Similarity=0.261 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhCCCEEEEEeCc
Q 044384 19 PLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 19 p~~~la~~La~rGh~VT~it~~ 40 (322)
--.++|++|+++|++|+++...
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEEECC
Confidence 4568899999999999998654
No 155
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=28.99 E-value=69 Score=23.77 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=24.4
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
..+++++ |.|.+- ..+++.|.++|++|+++...
T Consensus 19 ~~~v~Ii---G~G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIF---GCGRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEE---CCSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEE---CCCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 3478877 445443 56788999999999998764
No 156
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=28.88 E-value=1.1e+02 Score=20.81 Aligned_cols=34 Identities=15% Similarity=0.050 Sum_probs=22.0
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||++|.|..++ .+..+.+.+ ++|.++++....
T Consensus 43 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 83 (121)
T 2pl1_A 43 HIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARES 83 (121)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCC
Confidence 4689999998764 344444432 577777765443
No 157
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=28.86 E-value=63 Score=24.10 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=29.1
Q ss_pred eEEEEcCC-CCcChHHHHHHHHHHHhCCCEEEEEeCccch
Q 044384 5 HVLVMPGP-AQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (322)
Q Consensus 5 hv~~~p~p-~~gH~~p~~~la~~La~rGh~VT~it~~~~~ 43 (322)
+++++-+- ..-...+.+.+|...++.|++|+++-+..-.
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv 48 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGL 48 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHH
Confidence 45444443 4567778888898888999999999887544
No 158
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=28.84 E-value=70 Score=21.97 Aligned_cols=32 Identities=22% Similarity=0.137 Sum_probs=19.7
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccc
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-------NVRGGVFWSS 137 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-------~iP~i~~~~~ 137 (322)
.+||+||.|..++ .+..+++++ ++|.++++..
T Consensus 44 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 44 NKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp HCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 3589999998775 344554443 4677766543
No 159
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=27.86 E-value=78 Score=25.66 Aligned_cols=34 Identities=12% Similarity=0.080 Sum_probs=23.3
Q ss_pred CCccEEEecCCcch--HHHHHHHc----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMGW--SLEVAKKM----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~vA~~l----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++. +..+++++ ++|.|+++....
T Consensus 80 ~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~~ 119 (249)
T 3q9s_A 80 DHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARDT 119 (249)
T ss_dssp SCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCCS
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCCC
Confidence 56999999998763 44555443 578777766543
No 160
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=27.79 E-value=42 Score=26.32 Aligned_cols=21 Identities=14% Similarity=0.077 Sum_probs=18.1
Q ss_pred HHHHHHHHHhCCCEEEEEeCc
Q 044384 20 LLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 20 ~~~la~~La~rGh~VT~it~~ 40 (322)
-.+++++|+++||+|+.++-.
T Consensus 13 G~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 13 GSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHhCCCEEEEEEcC
Confidence 468999999999999988764
No 161
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=27.61 E-value=92 Score=24.07 Aligned_cols=40 Identities=23% Similarity=0.371 Sum_probs=25.2
Q ss_pred CCCCeEEEEcCCCCcChHHHH-HHHHHHHhCCCEEEEEeCc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLL-EFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~-~la~~La~rGh~VT~it~~ 40 (322)
|..++++++-....|+..-+. .+++.|.+.|++|+++.-.
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 554567766655567755443 4556666789999988654
No 162
>2llz_A Uncharacterized protein YJDK; RNAse, biofilm, unknown function; NMR {Escherichia coli}
Probab=27.56 E-value=28 Score=24.24 Aligned_cols=20 Identities=15% Similarity=0.370 Sum_probs=17.6
Q ss_pred ecCCcccCCHHHHHHHHHcc
Q 044384 275 AFGSLTILDQVQFQEFVDAR 294 (322)
Q Consensus 275 SfGS~~~l~~~q~~ela~~l 294 (322)
|||=.+.+++++++++|.||
T Consensus 56 sFgliS~l~~~ev~~La~~L 75 (100)
T 2llz_A 56 SFAITTSLAASEIEDLIRLK 75 (100)
T ss_dssp EEEECCCSCHHHHHHHHHHG
T ss_pred ceeeeccCCHHHHHHHHHHH
Confidence 56667789999999999998
No 163
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=27.55 E-value=35 Score=29.77 Aligned_cols=37 Identities=8% Similarity=0.086 Sum_probs=26.6
Q ss_pred CCCCeEEEEcCCCCc--Ch---HHHHHHHHHHHhCCCEEEEEe
Q 044384 1 MSSPHVLVMPGPAQG--HV---IPLLEFSQCLAKHGFRVTFVN 38 (322)
Q Consensus 1 m~~~hv~~~p~p~~g--H~---~p~~~la~~La~rGh~VT~it 38 (322)
|++.+|+++- .|.| |- ..-..+++.|-+.||+|+.|-
T Consensus 1 M~kkkv~vl~-GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIF-GGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEE-ECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEE-CCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 8888988773 3444 43 445678899999999999874
No 164
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=27.47 E-value=65 Score=27.29 Aligned_cols=35 Identities=9% Similarity=0.112 Sum_probs=26.0
Q ss_pred CCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 044384 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (322)
Q Consensus 2 ~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~ 42 (322)
=+++|+++-. | ....+++++.++||+|.++.....
T Consensus 1 m~m~Ililg~---g---~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 1 MKVRIATYAS---H---SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CCSEEEEESS---T---THHHHHHHHHHTTCCEEEESCGGG
T ss_pred CceEEEEECC---h---hHHHHHHHHHhCCCEEEEEECCCC
Confidence 0457887753 2 567899999999999998877543
No 165
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=27.44 E-value=93 Score=22.06 Aligned_cols=34 Identities=15% Similarity=0.260 Sum_probs=22.0
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+.+.+ ++|.|++.....
T Consensus 48 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 88 (143)
T 3jte_A 48 NSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGD 88 (143)
T ss_dssp TTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 4699999998764 344444433 577777665443
No 166
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=27.37 E-value=1.1e+02 Score=22.12 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=21.9
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+++.+ ++|.|++.....
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (153)
T 3cz5_A 50 TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQG 90 (153)
T ss_dssp TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCS
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 4699999998764 344444332 578777765543
No 167
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=27.35 E-value=48 Score=30.13 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=22.4
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEe
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it 38 (322)
|+ ||+|+ |.||- -+.-|..|+++|++||++=
T Consensus 1 Mk--~VvVI---GaG~~--GL~aA~~La~~G~~V~VlE 31 (501)
T 4dgk_A 1 MK--PTTVI---GAGFG--GLALAIRLQAAGIPVLLLE 31 (501)
T ss_dssp CC--CEEEE---CCHHH--HHHHHHHHHHTTCCEEEEC
T ss_pred CC--CEEEE---CCcHH--HHHHHHHHHHCCCcEEEEc
Confidence 55 47777 55543 3556778999999999973
No 168
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=27.35 E-value=48 Score=26.24 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=25.3
Q ss_pred CCC-CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 1 MSS-PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 1 m~~-~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
|.+ +.|++++-. .+...-+..++..|+++|++|..+-..
T Consensus 1 me~g~~vv~lHG~-~~~~~~~~~~~~~l~~~g~~vi~~D~~ 40 (258)
T 3dqz_A 1 MERKHHFVLVHNA-YHGAWIWYKLKPLLESAGHRVTAVELA 40 (258)
T ss_dssp --CCCEEEEECCT-TCCGGGGTTHHHHHHHTTCEEEEECCT
T ss_pred CCCCCcEEEECCC-CCccccHHHHHHHHHhCCCEEEEecCC
Confidence 555 456665543 344455778999999999998766543
No 169
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=27.24 E-value=57 Score=27.65 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=23.7
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
|+.+++++.- +.|. --.+++++|+++||+|+.+.-.
T Consensus 1 m~~~~vlVtG--atG~--iG~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALITG--IRGQ--DGAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp --CCEEEEET--TTSH--HHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEEC--CCCh--HHHHHHHHHHHCCCEEEEEECC
Confidence 5555666553 3343 2468899999999999987654
No 170
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=27.21 E-value=43 Score=26.82 Aligned_cols=22 Identities=9% Similarity=-0.035 Sum_probs=18.6
Q ss_pred HHHHHHHHHhCCCEEEEEeCcc
Q 044384 20 LLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 20 ~~~la~~La~rGh~VT~it~~~ 41 (322)
-.+++++|+++||+|+.++-..
T Consensus 34 G~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 34 ARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp HHHHHHHHHHTTCEEEEEESSG
T ss_pred HHHHHHHHHhCCCeEEEEECCh
Confidence 4688999999999999987643
No 171
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=27.14 E-value=1.5e+02 Score=22.78 Aligned_cols=40 Identities=8% Similarity=0.157 Sum_probs=28.7
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
|+..+|+++-+++.. ..-+......|...|++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 345689988877654 3445556667778899999998753
No 172
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=27.07 E-value=2.4e+02 Score=22.50 Aligned_cols=108 Identities=13% Similarity=0.058 Sum_probs=56.9
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCC--CEEEEEeCccc-hhhHHhhhccCCCCCCCeEEEecCCC-CCCCCCCC
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYY-HKRVVESLQGKNYLEEQIRLVSIPDG-MEPWEDRN 76 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rG--h~VT~it~~~~-~~~~~~~~~~~~~~~~~i~~~~i~~~-~~~~~~~~ 76 (322)
|.+.+++++-+ |.||. +.++.+++.+.+ ++|..+.+... ........ ..+|.+..++.. +..
T Consensus 5 m~~~ri~vl~S-G~gsn--l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~------~~gIp~~~~~~~~~~~----- 70 (209)
T 4ds3_A 5 MKRNRVVIFIS-GGGSN--MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAE------AAGIATQVFKRKDFAS----- 70 (209)
T ss_dssp -CCEEEEEEES-SCCHH--HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHH------HTTCCEEECCGGGSSS-----
T ss_pred CCCccEEEEEE-CCcHH--HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHH------HcCCCEEEeCccccCC-----
Confidence 77778887754 44554 566777776543 78887766432 21111110 135666555421 100
Q ss_pred CHHHHHHHHHHHchHHHHHHHHHHhccCCCCccEEEecCCcc-hHHHHHHHcCCceEEEccc
Q 044384 77 DFGKLIEKFLQVMPRKLEELIEEINSREDEKIDCFIADGNMG-WSLEVAKKMNVRGGVFWSS 137 (322)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~-~~~~vA~~l~iP~i~~~~~ 137 (322)
.....+.+.+.|++ .++|+||+=.|+. -...+-+.+.-.++-+.++
T Consensus 71 ---------r~~~d~~~~~~l~~------~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 71 ---------KEAHEDAILAALDV------LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp ---------HHHHHHHHHHHHHH------HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred ---------HHHHHHHHHHHHHh------cCCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 01112344455555 4689999887653 3345555665556666555
No 173
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=27.00 E-value=79 Score=25.42 Aligned_cols=32 Identities=9% Similarity=0.073 Sum_probs=22.6
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
+.+++.-.+. ---.+++++|+++|++|+++.-
T Consensus 8 k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 8 RRVLVYGGRG---ALGSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp CEEEEETTTS---HHHHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEECCCc---HHHHHHHHHHHhCCCEEEEEeC
Confidence 4555553332 2457899999999999988754
No 174
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=26.76 E-value=88 Score=21.61 Aligned_cols=32 Identities=16% Similarity=0.043 Sum_probs=19.8
Q ss_pred CCccEEEecCCcc--hHHHHHHH-------cCCceEEEccc
Q 044384 106 EKIDCFIADGNMG--WSLEVAKK-------MNVRGGVFWSS 137 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~-------l~iP~i~~~~~ 137 (322)
.+||+||+|..++ .+..++++ -++|.+++...
T Consensus 46 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 46 RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECC
Confidence 5699999998764 34444443 24566665543
No 175
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=26.69 E-value=41 Score=23.98 Aligned_cols=34 Identities=18% Similarity=0.182 Sum_probs=22.7
Q ss_pred CCccEEEecCCcch----HHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMGW----SLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~~----~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++. +..+++++ ++|.|+++....
T Consensus 49 ~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 91 (136)
T 3kto_A 49 DDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASSSD 91 (136)
T ss_dssp TTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSCC
T ss_pred cCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcCCC
Confidence 56999999988754 34444433 578777766543
No 176
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=26.53 E-value=45 Score=28.07 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=23.9
Q ss_pred CCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 2 ~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
.+++|+++- .|.+ -..++..|+++||+|+++...
T Consensus 2 ~~m~i~iiG---~G~~--G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 2 NAMKIAIAG---AGAM--GSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp --CEEEEEC---CSHH--HHHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEEC---cCHH--HHHHHHHHHhCCCcEEEEECC
Confidence 345788774 3433 356788999999999998764
No 177
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=26.43 E-value=32 Score=31.76 Aligned_cols=34 Identities=18% Similarity=0.447 Sum_probs=25.2
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
|+||+++- .|+- -+.+|++|.++|++||+|...+
T Consensus 42 KprVVIIG---gG~A--Gl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILG---SGWG--AISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEEC---SSHH--HHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEEC---CcHH--HHHHHHHhhhCCCcEEEECCCC
Confidence 57898884 3322 2567899999999999998653
No 178
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=26.35 E-value=76 Score=26.89 Aligned_cols=42 Identities=17% Similarity=0.263 Sum_probs=36.0
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCccchhhH
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYYHKRV 46 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~r--Gh~VT~it~~~~~~~~ 46 (322)
+|+++-..+.|-+.-..++.+.|.++ +.+||+++.......+
T Consensus 2 ~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~ 45 (326)
T 2gt1_A 2 RVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIP 45 (326)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHH
T ss_pred eEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHH
Confidence 68888888889999999999999986 8999999987665443
No 179
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=26.04 E-value=91 Score=27.30 Aligned_cols=34 Identities=24% Similarity=0.202 Sum_probs=22.0
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+++++ ++|.|+++...-
T Consensus 48 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~pii~lt~~~~ 88 (394)
T 3eq2_A 48 EQPDLVICDLRMPQIDGLELIRRIRQTASETPIIVLSGAGV 88 (394)
T ss_dssp SCCSEEEECCCSSSSCTHHHHHHHHHTTCCCCEEEC---CH
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhCCCCcEEEEEcCCC
Confidence 5699999999876 355665554 578777765543
No 180
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=25.70 E-value=1.1e+02 Score=21.65 Aligned_cols=22 Identities=27% Similarity=0.339 Sum_probs=15.1
Q ss_pred CCccEEEecCCcc--hHHHHHHHc
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM 127 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l 127 (322)
.+||+||+|..++ .+..+++.+
T Consensus 53 ~~~dlvllD~~lp~~~g~~~~~~l 76 (140)
T 3c97_A 53 RQFDVIIMDIQMPVMDGLEAVSEI 76 (140)
T ss_dssp SCCSEEEECTTCCSSCHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHH
Confidence 4699999998764 345555443
No 181
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=25.69 E-value=73 Score=26.60 Aligned_cols=36 Identities=14% Similarity=0.154 Sum_probs=24.9
Q ss_pred CC-CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 1 MS-SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 1 m~-~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
|. ++++++.- +.|.+ -.+++++|+++||+|+.++-.
T Consensus 1 M~~~~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 1 MDKKSRVLIVG--GTGYI--GKRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp -CCCCCEEEES--TTSTT--HHHHHHHHHHTTCCEEEECCS
T ss_pred CCCCCEEEEEc--CCcHH--HHHHHHHHHhCCCcEEEEECC
Confidence 54 44666663 34544 467889999999999988765
No 182
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=25.53 E-value=74 Score=24.89 Aligned_cols=32 Identities=13% Similarity=0.055 Sum_probs=21.9
Q ss_pred CccEEEecCCcc--hHHHHHHH---------cCCceEEEccch
Q 044384 107 KIDCFIADGNMG--WSLEVAKK---------MNVRGGVFWSSS 138 (322)
Q Consensus 107 ~~d~vI~D~~~~--~~~~vA~~---------l~iP~i~~~~~~ 138 (322)
+||+||+|..++ .+..+++. -++|.|+++...
T Consensus 119 ~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~ 161 (206)
T 3mm4_A 119 PFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHD 161 (206)
T ss_dssp SCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCC
Confidence 699999998875 34444433 357888777654
No 183
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=25.46 E-value=49 Score=26.06 Aligned_cols=21 Identities=19% Similarity=0.069 Sum_probs=18.1
Q ss_pred HHHHHHHHHhCCCEEEEEeCc
Q 044384 20 LLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 20 ~~~la~~La~rGh~VT~it~~ 40 (322)
-.+++++|+++||+|+.++-.
T Consensus 13 G~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 13 GSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEEec
Confidence 478999999999999988764
No 184
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=25.35 E-value=69 Score=27.16 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=23.4
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
|.+ +|.|+-..-.| .++|+.|+++||+|+++..
T Consensus 4 Ms~-kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~dr 36 (297)
T 4gbj_A 4 MSE-KIAFLGLGNLG-----TPIAEILLEAGYELVVWNR 36 (297)
T ss_dssp CCC-EEEEECCSTTH-----HHHHHHHHHTTCEEEEC--
T ss_pred CCC-cEEEEecHHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 543 68887554444 5789999999999998653
No 185
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=25.32 E-value=1.3e+02 Score=21.03 Aligned_cols=34 Identities=15% Similarity=0.002 Sum_probs=21.4
Q ss_pred CCccEEEecCCcc--hHHHHHHHc------CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM------NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l------~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+++.+ .+|.|+++....
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~~ 92 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAFAD 92 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESCCS
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECCCC
Confidence 4689999998875 344444332 457666655443
No 186
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=25.05 E-value=77 Score=26.39 Aligned_cols=36 Identities=14% Similarity=0.233 Sum_probs=24.4
Q ss_pred CC-CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 1 MS-SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 1 m~-~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
|. +++|+++- +.|.+ -.+++++|+++||+|+.++-.
T Consensus 1 M~~~~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 1 MGSRSRILLIG--ATGYI--GRHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp -CCCCCEEEES--TTSTT--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEEEc--CCcHH--HHHHHHHHHhCCCCEEEEECC
Confidence 55 44566664 33443 357889999999999987654
No 187
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=25.03 E-value=83 Score=25.50 Aligned_cols=38 Identities=24% Similarity=0.331 Sum_probs=32.5
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~ 42 (322)
..+++...+|-|=..-...|+..|+ +|.+|.++...+.
T Consensus 15 ~i~~~~GkgGvGKTTl~~~La~~l~-~g~~v~vvd~D~~ 52 (262)
T 1yrb_A 15 MIVVFVGTAGSGKTTLTGEFGRYLE-DNYKVAYVNLDTG 52 (262)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHT-TTSCEEEEECCSS
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 3466777888999999999999999 9999999987653
No 188
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=24.99 E-value=77 Score=23.01 Aligned_cols=34 Identities=15% Similarity=0.070 Sum_probs=22.4
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+.+.+ ++|.|++.....
T Consensus 46 ~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~ 86 (155)
T 1qkk_A 46 DFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGD 86 (155)
T ss_dssp TCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGG
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 4699999998764 344444432 678887766544
No 189
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=24.71 E-value=86 Score=22.63 Aligned_cols=34 Identities=18% Similarity=0.029 Sum_probs=21.6
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+.+.+ ++|.|++....-
T Consensus 60 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 100 (152)
T 3eul_A 60 HLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDE 100 (152)
T ss_dssp HCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCC
Confidence 4699999998764 344444433 467776665443
No 190
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=24.68 E-value=93 Score=24.50 Aligned_cols=31 Identities=23% Similarity=0.234 Sum_probs=20.4
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEcc
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWS 136 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~ 136 (322)
.+||+||+|..++ .+..+++.+ ++|.++++.
T Consensus 50 ~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~ 87 (233)
T 1ys7_A 50 NRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSA 87 (233)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEc
Confidence 5699999998775 344544443 567766643
No 191
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=24.61 E-value=1.5e+02 Score=23.97 Aligned_cols=41 Identities=27% Similarity=0.344 Sum_probs=26.5
Q ss_pred CCCCeEEEEcCCCCc-----------ChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 1 MSSPHVLVMPGPAQG-----------HVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 1 m~~~hv~~~p~p~~g-----------H~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
|.+++|+++-....+ ...=+......|.+.|++|+++++..
T Consensus 1 m~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp -CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 444567766543221 33456666677888999999998754
No 192
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=24.61 E-value=89 Score=21.97 Aligned_cols=33 Identities=24% Similarity=0.123 Sum_probs=20.5
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccch
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSS 138 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~ 138 (322)
.+||+||+|..++ .+..+++.+ ++|.+++....
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 89 (137)
T 3hdg_A 50 HAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFS 89 (137)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCc
Confidence 4699999998764 344444433 46666555443
No 193
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=24.57 E-value=1.6e+02 Score=22.87 Aligned_cols=34 Identities=26% Similarity=0.145 Sum_probs=22.8
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+++.+ ++|.|+++....
T Consensus 45 ~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~ 85 (225)
T 1kgs_A 45 EPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSD 85 (225)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSCH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 5699999998875 344444433 578877766544
No 194
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=24.46 E-value=95 Score=25.46 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=24.6
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
|.+.+++++.-.+. ---.+++++|+++|++|.++..
T Consensus 23 m~~~k~vlITGas~---gIG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSR---GIGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCc---hHHHHHHHHHHHCCCEEEEEcC
Confidence 33445666764433 2457999999999999987644
No 195
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=24.42 E-value=79 Score=27.10 Aligned_cols=32 Identities=13% Similarity=0.153 Sum_probs=24.4
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
.|+.|+-..+.| |-.+|+.|+++|++|+..=.
T Consensus 5 ~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 5 KHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 367777655555 55799999999999998744
No 196
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=24.32 E-value=70 Score=25.80 Aligned_cols=38 Identities=21% Similarity=0.312 Sum_probs=26.6
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
|.+..|+++.-.+.++.. ...++..|+++||+|..+--
T Consensus 1 ~~~~~vvllHG~~~~~~~-w~~~~~~L~~~g~~via~Dl 38 (257)
T 3c6x_A 1 MAFAHFVLIHTICHGAWI-WHKLKPLLEALGHKVTALDL 38 (257)
T ss_dssp -CCCEEEEECCTTCCGGG-GTTHHHHHHHTTCEEEEECC
T ss_pred CCCCcEEEEcCCccCcCC-HHHHHHHHHhCCCEEEEeCC
Confidence 677778888755544443 46788899999999876543
No 197
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=24.24 E-value=82 Score=26.91 Aligned_cols=37 Identities=11% Similarity=-0.078 Sum_probs=24.8
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
|++++|++.- +.|. --.+++++|+++||+|+.++-..
T Consensus 8 M~~~~IlVtG--atG~--iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAG--ATGF--IGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEEC--TTSH--HHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEEC--CCcH--HHHHHHHHHHHCCCCEEEEECCC
Confidence 4445676664 4453 34678999999999999987654
No 198
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=24.10 E-value=79 Score=25.50 Aligned_cols=34 Identities=15% Similarity=0.172 Sum_probs=23.0
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+++.+ ++|.++++....
T Consensus 66 ~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~ 106 (250)
T 3r0j_A 66 TRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARDS 106 (250)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECSTT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 4699999998875 345555443 578777766543
No 199
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=24.10 E-value=1.2e+02 Score=23.62 Aligned_cols=34 Identities=12% Similarity=0.190 Sum_probs=26.3
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 6 v~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
++++-....|+..-+..+++.|+++|+.|..+..
T Consensus 34 ~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 34 IVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred EEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 4555555667778899999999999998877654
No 200
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=23.90 E-value=52 Score=24.06 Aligned_cols=33 Identities=15% Similarity=0.187 Sum_probs=25.0
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
.|++++ |.|. .-..+++.|.++|++|+++...+
T Consensus 8 ~~viIi---G~G~--~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLV---GYGR--VGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEE---CCSH--HHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEE---CcCH--HHHHHHHHHHHCCCCEEEEECCH
Confidence 477777 3444 35678899999999999998754
No 201
>3egr_A Phenylacetate-COA oxygenase subunit PAAB; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; 2.65A {Ralstonia eutropha JMP134}
Probab=23.83 E-value=26 Score=24.40 Aligned_cols=48 Identities=15% Similarity=0.167 Sum_probs=33.6
Q ss_pred cccccCCCCCCcEEEEecCCcccCCHHHHHHHHHcc---------eeeecCCCCCCCCC
Q 044384 259 CLKWLDQQQPSSVIYAAFGSLTILDQVQFQEFVDAR---------FWLRLPTTRMSARS 308 (322)
Q Consensus 259 ~~~wLd~~~~~sVIYvSfGS~~~l~~~q~~ela~~l---------lWv~r~~~~~~~~~ 308 (322)
++=|..++ .|--+.--||+-.-+.+...+.|.-+ |||++.......+.
T Consensus 10 wEVFvr~~--~g~~h~HvGSvhApd~e~Al~~Ar~~f~RR~e~vsiWVVp~~~I~~~~p 66 (96)
T 3egr_A 10 WEVFVRSK--QGLEHKHCGSLHATDAQQALHMARDVYTRRQEGVSIWVVPSTAITASAP 66 (96)
T ss_dssp EEEEEECT--TCSSCEEEEEEECSSHHHHHHHHHHHTTTTCTTCEEEEEEGGGCEECCC
T ss_pred EEEEEeCC--CCCCceeeecccCCCHHHHHHHHHHHhccccCCceEEEeeHHHeeecCh
Confidence 44455442 34455666998888999888888877 99999977654333
No 202
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=23.83 E-value=85 Score=22.94 Aligned_cols=32 Identities=16% Similarity=0.060 Sum_probs=21.2
Q ss_pred CccEEEecCCcc--hHHHHHHHc-----CCceEEEccch
Q 044384 107 KIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSS 138 (322)
Q Consensus 107 ~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~ 138 (322)
++|+||+|..++ .+..+++++ ++|.|++....
T Consensus 83 ~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 121 (157)
T 3hzh_A 83 NIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALG 121 (157)
T ss_dssp GCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred CCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccC
Confidence 689999998764 344444443 57877766543
No 203
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=23.81 E-value=44 Score=29.12 Aligned_cols=35 Identities=6% Similarity=0.131 Sum_probs=23.9
Q ss_pred ccccccCCCCCCcEEEEecCCcc---cCCHHHHHHHHH
Q 044384 258 NCLKWLDQQQPSSVIYAAFGSLT---ILDQVQFQEFVD 292 (322)
Q Consensus 258 ~~~~wLd~~~~~sVIYvSfGS~~---~l~~~q~~ela~ 292 (322)
...+|+...+++.+||+++||.. ..+.+.++.++.
T Consensus 207 ~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~ 244 (391)
T 3tsa_A 207 AFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAA 244 (391)
T ss_dssp ECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHH
T ss_pred CCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHH
Confidence 45578876667789999999984 243555555543
No 204
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=23.71 E-value=58 Score=27.71 Aligned_cols=31 Identities=13% Similarity=0.188 Sum_probs=24.2
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
+|.|+-....| .++|+.|+++||+|++..-.
T Consensus 5 kIgfIGlG~MG-----~~mA~~L~~~G~~v~v~dr~ 35 (300)
T 3obb_A 5 QIAFIGLGHMG-----APMATNLLKAGYLLNVFDLV 35 (300)
T ss_dssp EEEEECCSTTH-----HHHHHHHHHTTCEEEEECSS
T ss_pred EEEEeeehHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 57777655555 47899999999999998654
No 205
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=23.69 E-value=2e+02 Score=31.12 Aligned_cols=104 Identities=10% Similarity=0.043 Sum_probs=0.0
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhhHHhhhccCCCCCCCeEEEecCCCCCCCCCCCCHHHHHHHH
Q 044384 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWEDRNDFGKLIEKF 85 (322)
Q Consensus 6 v~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~ 85 (322)
+++.--|+.|-..-.++++...+.+|..|.|++.+.......... .++....+--.-+..
T Consensus 386 ilI~G~pGsGKTtLaLq~a~~~~~~G~~vlyis~E~s~~~~~a~~-------lGvd~~~L~i~~~~~------------- 445 (1706)
T 3cmw_A 386 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARK-------LGVDIDNLLCSQPDT------------- 445 (1706)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEECTTSCCCHHHHHH-------TTCCGGGCEEECCSS-------------
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHH-------cCCCHHHeEEcCCCC-------------
Q ss_pred HHHchHHHHHHHHHHhccCCCCccEEEecCCcchH----------------------------HHHHHHcCCceEEEc
Q 044384 86 LQVMPRKLEELIEEINSREDEKIDCFIADGNMGWS----------------------------LEVAKKMNVRGGVFW 135 (322)
Q Consensus 86 ~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~----------------------------~~vA~~l~iP~i~~~ 135 (322)
.......++.++++ .++|+||.|....-. ..+|+++|+|.+.+.
T Consensus 446 ~e~~l~~l~~lv~~------~~~~lVVIDSL~al~~~~e~e~~~g~~~~~~q~r~~s~~Lr~L~~~ak~~~v~VI~in 517 (1706)
T 3cmw_A 446 GEQALEICDALARS------GAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFIN 517 (1706)
T ss_dssp HHHHHHHHHHHHHH------TCCSEEEESCSTTCCCHHHHHSCTTCCCTTHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHh------cCCCEEEECCHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCEEEEEe
No 206
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=23.67 E-value=71 Score=28.53 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=21.6
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCcc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDY 41 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~r--Gh~VT~it~~~ 41 (322)
|+| ||+++- .|.+.+ ..|+.|+++ +++||+|...+
T Consensus 1 M~K-~VvIIG-gG~aGl----~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 1 MAK-HVVVIG-GGVGGI----ATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp -CC-EEEEEC-SSHHHH----HHHHHHHHHCTTCEEEEECSSS
T ss_pred CCC-cEEEEC-CCHHHH----HHHHHHhccCcCCeEEEEcCCC
Confidence 776 888873 233333 345556654 49999998754
No 207
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=23.66 E-value=96 Score=21.99 Aligned_cols=33 Identities=12% Similarity=-0.051 Sum_probs=21.1
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccch
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSS 138 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~ 138 (322)
.++|+||+|..++ .+..+++.+ ++|.+++....
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~ 86 (137)
T 3cfy_A 47 SKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHG 86 (137)
T ss_dssp HCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecC
Confidence 3589999998764 345554443 46666665544
No 208
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=23.60 E-value=56 Score=23.74 Aligned_cols=35 Identities=9% Similarity=0.066 Sum_probs=24.7
Q ss_pred EEEcCCCCc--ChHHHHHHHHHHHhCCCEE-EEEeCcc
Q 044384 7 LVMPGPAQG--HVIPLLEFSQCLAKHGFRV-TFVNTDY 41 (322)
Q Consensus 7 ~~~p~p~~g--H~~p~~~la~~La~rGh~V-T~it~~~ 41 (322)
+++..+-.| .....+.+++.+++.||+| +++-...
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~d 42 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHD 42 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEech
Confidence 344444343 4566788899999999999 8877653
No 209
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=23.55 E-value=92 Score=25.80 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=23.7
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
.+++++.-.+.| --.+++++|+++|++|.++...
T Consensus 24 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 24 PQTAFVTGVSSG---IGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp -CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356666644432 4578999999999999877643
No 210
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=23.41 E-value=3.9e+02 Score=23.66 Aligned_cols=36 Identities=17% Similarity=0.259 Sum_probs=25.3
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
|...+|++. +.|. .-+.+++.+.+.|++|.++.+..
T Consensus 4 m~~~kiLI~---g~g~--~a~~i~~aa~~~G~~~v~v~~~~ 39 (446)
T 3ouz_A 4 MEIKSILIA---NRGE--IALRALRTIKEMGKKAICVYSEA 39 (446)
T ss_dssp TCCCEEEEC---CCHH--HHHHHHHHHHHTTCEEEEEEEGG
T ss_pred cccceEEEE---CCCH--HHHHHHHHHHHcCCEEEEEEcCc
Confidence 334467664 4444 45788999999999999886543
No 211
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=23.39 E-value=63 Score=26.31 Aligned_cols=36 Identities=8% Similarity=0.157 Sum_probs=23.4
Q ss_pred eEEEEcCCCCcCh--HHHHHHHHHHHhCCCEEEEEeCc
Q 044384 5 HVLVMPGPAQGHV--IPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 5 hv~~~p~p~~gH~--~p~~~la~~La~rGh~VT~it~~ 40 (322)
-++++...+.+|- .-+..+++.|+++|+.|-.+-..
T Consensus 57 p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 57 RLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp EEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 4677777777773 35789999999999988876543
No 212
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=23.30 E-value=1.2e+02 Score=26.44 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=24.0
Q ss_pred CCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 2 ~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
.+.+|+|+ |.| ..-+.+|..|+++|++|+++--
T Consensus 4 ~~~~V~IV---GaG--~aGl~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 4 TTDRIAVV---GGS--ISGLTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CCSEEEEE---CCS--HHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCcEEEE---CCC--HHHHHHHHHHHhCCCCEEEEec
Confidence 34577777 333 3457788889999999999853
No 213
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=23.28 E-value=64 Score=26.42 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=29.2
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 6 v~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
|++..-.|-|-..-...||..|+++|++|.++=..+
T Consensus 4 I~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D~ 39 (269)
T 1cp2_A 4 VAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP 39 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred EEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCCC
Confidence 455445567999999999999999999999985543
No 214
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=23.21 E-value=70 Score=25.48 Aligned_cols=30 Identities=23% Similarity=0.290 Sum_probs=26.7
Q ss_pred CCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 12 PAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 12 p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
.|-|-..-...||..|+++|++|-++-...
T Consensus 12 gGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 12 GGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp TTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 466999999999999999999999997754
No 215
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=23.12 E-value=1e+02 Score=25.61 Aligned_cols=35 Identities=26% Similarity=0.247 Sum_probs=25.5
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
|...+|+++ |.|. .-..+|+.|+++||+|+++...
T Consensus 2 m~~~kV~VI---GaG~--mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 2 TGITNVTVL---GTGV--LGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CSCCEEEEE---CCSH--HHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCEEEEE---CCCH--HHHHHHHHHHhCCCeEEEEeCC
Confidence 344578888 4443 3467889999999999998654
No 216
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=23.05 E-value=77 Score=25.81 Aligned_cols=31 Identities=26% Similarity=0.334 Sum_probs=27.1
Q ss_pred CCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 11 GPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 11 ~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
-.|-|-..-...||..|+++|++|.++-...
T Consensus 11 kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 11 KGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp SSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4566999999999999999999999997654
No 217
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=22.92 E-value=87 Score=25.70 Aligned_cols=38 Identities=18% Similarity=0.176 Sum_probs=21.9
Q ss_pred CCCCe-EEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 1 MSSPH-VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 1 m~~~h-v~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
|.+.+ +++.|.|.-= .+-+-....+++++|++|++++-
T Consensus 1 ~~~~~vL~v~aHPDDe-~l~~Ggtia~~~~~G~~V~vv~l 39 (242)
T 2ixd_A 1 MSGLHILAFGAHADDV-EIGMAGTIAKYTKQGYEVGICDL 39 (242)
T ss_dssp -CCCSEEEEESSTTHH-HHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCccEEEEEeCCChH-HHhHHHHHHHHHHCCCeEEEEEE
Confidence 44444 4555555432 22334455677889999998754
No 218
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=22.88 E-value=1.4e+02 Score=28.24 Aligned_cols=43 Identities=7% Similarity=0.014 Sum_probs=36.5
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccchhh
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKR 45 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~~~~~ 45 (322)
+.+|++.+.++-.|-+...-++..|..+|++|..+...-....
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~ 140 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEK 140 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 4589999999999999999999999999999998866543333
No 219
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=22.76 E-value=16 Score=30.53 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=25.0
Q ss_pred Ccc-EEEecCCc-chHHHHHHHcCCceEEEccchH
Q 044384 107 KID-CFIADGNM-GWSLEVAKKMNVRGGVFWSSSA 139 (322)
Q Consensus 107 ~~d-~vI~D~~~-~~~~~vA~~l~iP~i~~~~~~~ 139 (322)
.|| +||+|.-- .-+..-|.++|||.|++.-+.+
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADTDS 192 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTS
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 477 55678765 4677889999999999875544
No 220
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=22.74 E-value=55 Score=28.21 Aligned_cols=39 Identities=13% Similarity=0.271 Sum_probs=28.0
Q ss_pred CCCCeEEEEcCCCCc--ChH---HHHHHHHHHHhCCCEEEEEeCc
Q 044384 1 MSSPHVLVMPGPAQG--HVI---PLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 1 m~~~hv~~~p~p~~g--H~~---p~~~la~~La~rGh~VT~it~~ 40 (322)
|.+++|+++. .|+| |-. ....++++|.+.||+|..+...
T Consensus 1 m~~~~v~vl~-gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 1 MNRIKVAILF-GGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp -CCEEEEEEE-ECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEe-CCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 7777888776 3455 333 5677899999999999988653
No 221
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=22.73 E-value=1.4e+02 Score=21.49 Aligned_cols=33 Identities=18% Similarity=0.077 Sum_probs=20.7
Q ss_pred CccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 107 KIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 107 ~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
++|+||+|..++ .+..+++.+ ++|.|++.....
T Consensus 48 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 87 (151)
T 3kcn_A 48 PFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQD 87 (151)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGGG
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 479999998764 344444432 567776665443
No 222
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=22.70 E-value=1.2e+02 Score=24.29 Aligned_cols=46 Identities=13% Similarity=0.090 Sum_probs=31.2
Q ss_pred HHHHHHHHHhccC-CCCccEEEecCCcchHHHHHHHcCCceEEEccc
Q 044384 92 KLEELIEEINSRE-DEKIDCFIADGNMGWSLEVAKKMNVRGGVFWSS 137 (322)
Q Consensus 92 ~~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~~ 137 (322)
.++++++...... +..+.+||+|---..+...|.++|||...+.+.
T Consensus 15 nl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~ 61 (211)
T 3p9x_A 15 NAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPK 61 (211)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGG
T ss_pred HHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChh
Confidence 4566666543221 124789999865455678999999999877654
No 223
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=22.70 E-value=1.4e+02 Score=22.92 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=31.1
Q ss_pred eEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 5 hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
-+.+.-.++.|-..-+..|+++|..+|.+|.++...+
T Consensus 6 ~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 6 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 3566667788999999999999999999999888654
No 224
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=22.67 E-value=63 Score=26.00 Aligned_cols=31 Identities=13% Similarity=0.188 Sum_probs=23.9
Q ss_pred Ccc-EEEecCCc-chHHHHHHHcCCceEEEccc
Q 044384 107 KID-CFIADGNM-GWSLEVAKKMNVRGGVFWSS 137 (322)
Q Consensus 107 ~~d-~vI~D~~~-~~~~~vA~~l~iP~i~~~~~ 137 (322)
.|| ++|+|.-. ..+..-|.++|||.|+++-+
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 147 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCDS 147 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeCC
Confidence 466 56688765 46778899999999998654
No 225
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=22.43 E-value=1.4e+02 Score=23.59 Aligned_cols=33 Identities=27% Similarity=0.236 Sum_probs=24.4
Q ss_pred CeEEEEcCCC---C----cChHHHHHHHHHHHhCCCEEEE
Q 044384 4 PHVLVMPGPA---Q----GHVIPLLEFSQCLAKHGFRVTF 36 (322)
Q Consensus 4 ~hv~~~p~p~---~----gH~~p~~~la~~La~rGh~VT~ 36 (322)
..|.+|.... . -...-..+|++.||++|+.|..
T Consensus 24 ~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVs 63 (195)
T 1rcu_A 24 KKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFN 63 (195)
T ss_dssp CEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEe
Confidence 4688887532 2 5678889999999999976554
No 226
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=22.20 E-value=1.2e+02 Score=20.71 Aligned_cols=33 Identities=12% Similarity=0.124 Sum_probs=20.7
Q ss_pred CCccEEEecCCcc---hHHHHHHH-------cCCceEEEccchH
Q 044384 106 EKIDCFIADGNMG---WSLEVAKK-------MNVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~---~~~~vA~~-------l~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+.+. -++|.+++ ....
T Consensus 48 ~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~-~~~~ 90 (127)
T 2gkg_A 48 DRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII-GNPD 90 (127)
T ss_dssp HCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE-ECGG
T ss_pred cCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE-ecCC
Confidence 3589999998765 33443333 35788877 5443
No 227
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=22.13 E-value=1.1e+02 Score=25.01 Aligned_cols=36 Identities=14% Similarity=0.188 Sum_probs=24.2
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
|.+.+.+++.-.+. ---.+++++|+++|++|.++..
T Consensus 1 M~~~k~vlVTGas~---gIG~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 1 MEQNKCALVTGSSR---GVGKAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp --CCCEEEESSCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEecCCc---hHHHHHHHHHHHCCCEEEEEcC
Confidence 55556777764333 2357899999999999998633
No 228
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=21.95 E-value=1.2e+02 Score=26.37 Aligned_cols=38 Identities=24% Similarity=0.309 Sum_probs=31.8
Q ss_pred eEEEEcC-CCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 044384 5 HVLVMPG-PAQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (322)
Q Consensus 5 hv~~~p~-p~~gH~~p~~~la~~La~rGh~VT~it~~~~ 42 (322)
.++++.. +|-|-......||..||++|++|-++..+..
T Consensus 27 ~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 27 KYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4555554 5669999999999999999999999999863
No 229
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=21.91 E-value=52 Score=16.77 Aligned_cols=16 Identities=38% Similarity=0.547 Sum_probs=8.6
Q ss_pred CCcc-cCCHHHHHHHHH
Q 044384 277 GSLT-ILDQVQFQEFVD 292 (322)
Q Consensus 277 GS~~-~l~~~q~~ela~ 292 (322)
||-+ .+++.|++|+..
T Consensus 3 gsgvtrfdekqieelld 19 (31)
T 4h62_V 3 GSGVTRFDEKQIEELLD 19 (31)
T ss_dssp -------CHHHHHHHHH
T ss_pred CCccccccHHHHHHHHH
Confidence 5543 688999999875
No 230
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=21.91 E-value=81 Score=21.44 Aligned_cols=34 Identities=24% Similarity=0.163 Sum_probs=22.1
Q ss_pred CCccEEEecCCcc--hHHHHHHHc----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l----~iP~i~~~~~~~ 139 (322)
.++|+||+|..++ .+..+++++ .+|.+.++....
T Consensus 44 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (121)
T 1zh2_A 44 RKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSE 83 (121)
T ss_dssp HCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCS
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEEEECCCC
Confidence 3589999998764 345555443 467777765443
No 231
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=21.86 E-value=93 Score=22.43 Aligned_cols=34 Identities=18% Similarity=0.113 Sum_probs=22.1
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-------CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-------NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~~ 139 (322)
.++|+||+|..++ .+..+++.+ ++|.|+++....
T Consensus 60 ~~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~~ 102 (149)
T 1i3c_A 60 PRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHN 102 (149)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCCC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCCC
Confidence 3689999998875 344444443 467777766543
No 232
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=21.75 E-value=98 Score=24.06 Aligned_cols=34 Identities=32% Similarity=0.201 Sum_probs=22.3
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..+++.+ ++|.++++....
T Consensus 50 ~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls~~~~ 90 (215)
T 1a04_A 50 LDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNH 90 (215)
T ss_dssp HCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECCCC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEECCCC
Confidence 3589999998875 345555443 467776665543
No 233
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=21.70 E-value=1.4e+02 Score=23.05 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=25.2
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 6 v~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
++++-....|...-+..+++.|+++|+.|..+..
T Consensus 30 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 30 VIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 4444445556677889999999999998876654
No 234
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=21.69 E-value=1.4e+02 Score=21.05 Aligned_cols=22 Identities=23% Similarity=0.324 Sum_probs=16.0
Q ss_pred CCccEEEecCCcc--hHHHHHHHc
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM 127 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l 127 (322)
.+||+||+|..++ .+..+++.+
T Consensus 54 ~~~dlvi~d~~l~~~~g~~~~~~l 77 (143)
T 2qv0_A 54 NKVDAIFLDINIPSLDGVLLAQNI 77 (143)
T ss_dssp CCCSEEEECSSCSSSCHHHHHHHH
T ss_pred CCCCEEEEecCCCCCCHHHHHHHH
Confidence 4699999998764 455666655
No 235
>1lgh_B LH II, B800/850, light harvesting complex II; bacteriochlorophyll, dexter energy transfer, foerster exciton transfer mechanism; HET: BCL LYC DET HTO; 2.40A {Phaeospirillum molischianum} SCOP: f.3.1.1
Probab=21.66 E-value=31 Score=20.34 Aligned_cols=18 Identities=22% Similarity=0.056 Sum_probs=13.7
Q ss_pred CCcccCCHHHHHHHHHcc
Q 044384 277 GSLTILDQVQFQEFVDAR 294 (322)
Q Consensus 277 GS~~~l~~~q~~ela~~l 294 (322)
+|...|+++|.+|+-.-+
T Consensus 3 ~s~tGLT~~EA~EfH~~~ 20 (45)
T 1lgh_B 3 RSLSGLTEEEAIAVHDQF 20 (45)
T ss_dssp CCSSSCCHHHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHH
Confidence 456678999999986655
No 236
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=21.57 E-value=1.1e+02 Score=25.20 Aligned_cols=43 Identities=5% Similarity=-0.062 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhccCCCCccEEEecCCcc---hHHHH----HHHcCCceEEEccc
Q 044384 91 RKLEELIEEINSREDEKIDCFIADGNMG---WSLEV----AKKMNVRGGVFWSS 137 (322)
Q Consensus 91 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~---~~~~v----A~~l~iP~i~~~~~ 137 (322)
+.+.++++++. .+||+|++|-... =..++ .-.+|+|.|++.=+
T Consensus 95 P~ll~al~~L~----~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs 144 (237)
T 3goc_A 95 PTVLAALDALP----CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAKN 144 (237)
T ss_dssp HHHHHHHHTSS----SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEESS
T ss_pred HHHHHHHHhcC----CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeecc
Confidence 34555666653 4699999997632 12344 44457899887433
No 237
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=21.50 E-value=85 Score=22.22 Aligned_cols=32 Identities=28% Similarity=0.147 Sum_probs=18.0
Q ss_pred CCccEEEecCCcch--HHHHHHH-------cCCceEEEccc
Q 044384 106 EKIDCFIADGNMGW--SLEVAKK-------MNVRGGVFWSS 137 (322)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~vA~~-------l~iP~i~~~~~ 137 (322)
.+||+||+|..++. +..+++. -++|.|++...
T Consensus 45 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 45 HHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp HCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 46899999987642 3333332 35676666543
No 238
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=21.48 E-value=1.6e+02 Score=20.68 Aligned_cols=31 Identities=13% Similarity=0.002 Sum_probs=19.8
Q ss_pred CCccEEEecCCcc---hHHHHHHH----cCCceEEEcc
Q 044384 106 EKIDCFIADGNMG---WSLEVAKK----MNVRGGVFWS 136 (322)
Q Consensus 106 ~~~d~vI~D~~~~---~~~~vA~~----l~iP~i~~~~ 136 (322)
.+||+||+|..++ .+..+++. -++|.|+++.
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~ 86 (140)
T 3h5i_A 49 WYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTA 86 (140)
T ss_dssp CCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEES
T ss_pred CCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEEC
Confidence 4699999998763 24444433 3677766654
No 239
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=21.46 E-value=1.1e+02 Score=21.50 Aligned_cols=21 Identities=10% Similarity=-0.072 Sum_probs=14.0
Q ss_pred CCccEEEecCCcc--hHHHHHHH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKK 126 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~ 126 (322)
.++|+||+|..++ .+..+.+.
T Consensus 50 ~~~dlii~d~~l~~~~g~~~~~~ 72 (142)
T 3cg4_A 50 GFSGVVLLDIMMPGMDGWDTIRA 72 (142)
T ss_dssp CCCEEEEEESCCSSSCHHHHHHH
T ss_pred cCCCEEEEeCCCCCCCHHHHHHH
Confidence 5699999998764 34444433
No 240
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=21.35 E-value=1.2e+02 Score=25.63 Aligned_cols=37 Identities=24% Similarity=0.283 Sum_probs=24.9
Q ss_pred eEEEEcCC--CCcCh-HHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 5 HVLVMPGP--AQGHV-IPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 5 hv~~~p~p--~~gH~-~p~~~la~~La~rGh~VT~it~~~ 41 (322)
+++++-.| +.|.. .-..++.+.|.++|+++++..+..
T Consensus 10 ~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~ 49 (304)
T 3s40_A 10 KVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE 49 (304)
T ss_dssp SEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS
T ss_pred EEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC
Confidence 45555444 55542 345677888899999999987654
No 241
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=21.25 E-value=1.1e+02 Score=21.30 Aligned_cols=32 Identities=22% Similarity=0.139 Sum_probs=20.1
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccc
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSS 137 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~ 137 (322)
.+||+||+|..++ .+..+++.+ .+|.++++..
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (136)
T 1mvo_A 46 EKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAK 84 (136)
T ss_dssp HCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECT
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEECC
Confidence 3589999998764 344444433 4676666543
No 242
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=21.05 E-value=1.2e+02 Score=25.77 Aligned_cols=32 Identities=16% Similarity=0.326 Sum_probs=23.8
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
++|.++-....| ..+++.|+++||+|+++...
T Consensus 32 ~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 478888443333 67888999999999988654
No 243
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=20.95 E-value=1.3e+02 Score=24.05 Aligned_cols=45 Identities=20% Similarity=0.222 Sum_probs=29.8
Q ss_pred HHHHHHHHHhccC-CCCccEEEecCCcchHHHHHHHcCCceEEEcc
Q 044384 92 KLEELIEEINSRE-DEKIDCFIADGNMGWSLEVAKKMNVRGGVFWS 136 (322)
Q Consensus 92 ~~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~vA~~l~iP~i~~~~ 136 (322)
.++++++.+.... +..+.+||+|.--..+...|+++|||...+..
T Consensus 20 nl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 20 NMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKR 65 (209)
T ss_dssp HHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCc
Confidence 3556666654321 02468899985444567899999999887754
No 244
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=20.91 E-value=1.3e+02 Score=22.01 Aligned_cols=38 Identities=16% Similarity=0.276 Sum_probs=24.3
Q ss_pred CCCCeEEEEcCCCCcCh-HHHHHHHHHHHhCCCEEEEEe
Q 044384 1 MSSPHVLVMPGPAQGHV-IPLLEFSQCLAKHGFRVTFVN 38 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~-~p~~~la~~La~rGh~VT~it 38 (322)
|.++.|+++.-.+.+.. .-+..+++.|+++|+.|..+.
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d 40 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPD 40 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCC
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeC
Confidence 34556676664443222 246689999999998776443
No 245
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=20.91 E-value=1.1e+02 Score=21.37 Aligned_cols=32 Identities=16% Similarity=0.045 Sum_probs=20.4
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccc
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSS 137 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~ 137 (322)
.+||+||+|..++ .+..+.+++ ++|.++++..
T Consensus 45 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 83 (134)
T 3f6c_A 45 LKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAK 83 (134)
T ss_dssp HCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC
T ss_pred cCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCC
Confidence 3589999998764 344554443 4676666544
No 246
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=20.87 E-value=51 Score=28.45 Aligned_cols=19 Identities=16% Similarity=0.195 Sum_probs=16.2
Q ss_pred HHHHHHHHHhCCCEEEEEe
Q 044384 20 LLEFSQCLAKHGFRVTFVN 38 (322)
Q Consensus 20 ~~~la~~La~rGh~VT~it 38 (322)
-+.+|..|+++|++|+++=
T Consensus 16 Gl~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 16 GSTAARYAAKYGLKTLMIE 34 (397)
T ss_dssp HHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHCCCcEEEEe
Confidence 3667889999999999983
No 247
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=20.81 E-value=1.3e+02 Score=19.91 Aligned_cols=32 Identities=6% Similarity=-0.164 Sum_probs=20.0
Q ss_pred CCccEEEecCCcc--hHHHHHHH-------cCCceEEEccc
Q 044384 106 EKIDCFIADGNMG--WSLEVAKK-------MNVRGGVFWSS 137 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~-------l~iP~i~~~~~ 137 (322)
.++|+||+|..++ .+..+.+. -++|.|++...
T Consensus 44 ~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~ 84 (119)
T 2j48_A 44 LQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGE 84 (119)
T ss_dssp HCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESS
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCC
Confidence 3589999997754 33333333 35777776654
No 248
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=20.80 E-value=87 Score=25.51 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=22.0
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccch
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSS 138 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~ 138 (322)
.+||+||+|..++ .+..+++++ ++|.|+++...
T Consensus 172 ~~~dlvl~D~~mp~~~G~~l~~~ir~~~~~~piI~lt~~~ 211 (254)
T 2ayx_A 172 NHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANA 211 (254)
T ss_dssp SCCSEEEEEESSCSSCCHHHHHHHHHHHCCSCEEEEESST
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 5699999998775 344444332 67888776544
No 249
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=20.80 E-value=59 Score=28.28 Aligned_cols=29 Identities=34% Similarity=0.434 Sum_probs=21.5
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEE
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFV 37 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~i 37 (322)
+||+|+- .| ..-+.+|..|+++|++||++
T Consensus 2 m~V~IVG---aG--paGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIG---AG--IGGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEEC---CS--HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEC---cC--HHHHHHHHHHHhCCCCEEEE
Confidence 5677773 33 23467888899999999998
No 250
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=20.68 E-value=80 Score=26.27 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=29.4
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 6 v~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
|++..-.|-|-..-...||..|+++|++|.+|=..+
T Consensus 5 Iavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~ 40 (289)
T 2afh_E 5 CAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40 (289)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred EEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 455445567999999999999999999999986554
No 251
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=20.59 E-value=59 Score=25.62 Aligned_cols=21 Identities=5% Similarity=0.040 Sum_probs=18.1
Q ss_pred HHHHHHHHHhCCCEEEEEeCc
Q 044384 20 LLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 20 ~~~la~~La~rGh~VT~it~~ 40 (322)
-.+++++|+++||+|+.+.-.
T Consensus 13 G~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 13 GKSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp HHHHHHHHTTSSCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 468999999999999988754
No 252
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=20.45 E-value=1.5e+02 Score=23.81 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=24.7
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
|-+.+.+++.-.+. ---.+++++|+++|++|.++..
T Consensus 1 Ml~~k~~lVTGas~---gIG~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 1 MKMTKSALVTGASR---GIGRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp CCCSCEEEETTCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCC---hHHHHHHHHHHHCCCEEEEEeC
Confidence 43445666653333 2457899999999999988754
No 253
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=20.40 E-value=3.8e+02 Score=23.05 Aligned_cols=33 Identities=12% Similarity=0.115 Sum_probs=25.2
Q ss_pred EEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 8 VMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 8 ~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
.+-..+.|-......|+++|.++| +|.+.++.+
T Consensus 44 wih~~s~G~~~~~~~L~~~L~~~~-~v~v~~~~~ 76 (374)
T 2xci_A 44 WVHTASIGEFNTFLPILKELKREH-RILLTYFSP 76 (374)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHHS-CEEEEESCG
T ss_pred EEEcCCHHHHHHHHHHHHHHHhcC-CEEEEEcCC
Confidence 344456677889999999999999 887666543
No 254
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=20.22 E-value=69 Score=25.39 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=21.2
Q ss_pred CCccEEEecCCcc--hHHHHHHHc-----CCceEEEccch
Q 044384 106 EKIDCFIADGNMG--WSLEVAKKM-----NVRGGVFWSSS 138 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~ 138 (322)
.+||+||+|..++ .+..+++.+ ++|.++++...
T Consensus 46 ~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~ 85 (225)
T 3c3w_A 46 ARPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTSYT 85 (225)
T ss_dssp HCCSEEEECSEETTEEHHHHHHHHHHHCTTCEEEEGGGSS
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHhCCCCcEEEEECCC
Confidence 3589999998765 344554443 56776665543
No 255
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=20.21 E-value=1.6e+02 Score=24.08 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=24.3
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~~ 41 (322)
++|++.- + |. --.+++++|.++||+|+.++-..
T Consensus 6 ~~ilVtG--a-G~--iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFG--H-GY--TARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEET--C-CH--HHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEEC--C-cH--HHHHHHHHHHHCCCEEEEEEcCh
Confidence 3666664 3 43 34688999999999999987654
No 256
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=20.16 E-value=3.6e+02 Score=21.98 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=24.8
Q ss_pred CCCCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 1 m~~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
|.| .++++-.+.| --.++|++|++.|.+|.++-.
T Consensus 1 MnK--~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~ 34 (247)
T 3ged_A 1 MNR--GVIVTGGGHG---IGKQICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp -CC--EEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCC--EEEEecCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 554 6677755554 457899999999999987754
No 257
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=20.15 E-value=1.5e+02 Score=21.24 Aligned_cols=34 Identities=9% Similarity=0.079 Sum_probs=22.3
Q ss_pred CCccEEEecCCcc--hHHHHHHH-------cCCceEEEccchH
Q 044384 106 EKIDCFIADGNMG--WSLEVAKK-------MNVRGGVFWSSSA 139 (322)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~-------l~iP~i~~~~~~~ 139 (322)
.+||+||+|..++ .+..++++ -++|.|+++....
T Consensus 58 ~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~~~ 100 (152)
T 3heb_A 58 GRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTTDD 100 (152)
T ss_dssp TCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESCCC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecCCC
Confidence 5799999998764 34444433 2567777766543
No 258
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=20.10 E-value=2.1e+02 Score=21.82 Aligned_cols=46 Identities=9% Similarity=0.039 Sum_probs=33.0
Q ss_pred CCCCeEEEEcCCCC-cChHHHHHHHHHHHhCCCEEEEEeCccchhhH
Q 044384 1 MSSPHVLVMPGPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRV 46 (322)
Q Consensus 1 m~~~hv~~~p~p~~-gH~~p~~~la~~La~rGh~VT~it~~~~~~~~ 46 (322)
|.+.++.++-+-+. --..+-.-+|..-++-|++||++-|..-...+
T Consensus 2 m~~~kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l 48 (160)
T 3pnx_A 2 MENKKMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLL 48 (160)
T ss_dssp CTTCEEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGG
T ss_pred CCCCcEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHh
Confidence 55566666665553 55677777888888999999999887654433
No 259
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=20.10 E-value=72 Score=25.38 Aligned_cols=22 Identities=23% Similarity=0.289 Sum_probs=18.2
Q ss_pred HHHHHHHHHHhCCCEEEEEeCc
Q 044384 19 PLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 19 p~~~la~~La~rGh~VT~it~~ 40 (322)
--.+++++|+++|++|+++...
T Consensus 17 iG~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 17 IGEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp HHHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHHCCCEEEEEECC
Confidence 3578999999999999987653
No 260
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=20.09 E-value=1e+02 Score=26.16 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=23.1
Q ss_pred CCeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 044384 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 3 ~~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~ 39 (322)
.+++++.- +.|. --.+++++|+++||+|+.+.-
T Consensus 27 ~~~vlVtG--atG~--iG~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITG--GAGF--VGSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp CCEEEEET--TTSH--HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEEc--CccH--HHHHHHHHHHHCCCEEEEEeC
Confidence 34565553 3343 346889999999999998865
No 261
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=20.04 E-value=72 Score=25.59 Aligned_cols=21 Identities=19% Similarity=0.183 Sum_probs=17.5
Q ss_pred HHHHHHHHHHhCCCEEEEEeC
Q 044384 19 PLLEFSQCLAKHGFRVTFVNT 39 (322)
Q Consensus 19 p~~~la~~La~rGh~VT~it~ 39 (322)
--.+++++|+++|++|+++.-
T Consensus 13 iG~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 13 IGAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp HHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHhCCCEEEEEeC
Confidence 356889999999999998754
No 262
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=20.03 E-value=1.8e+02 Score=21.45 Aligned_cols=36 Identities=25% Similarity=0.414 Sum_probs=24.1
Q ss_pred EEEEcCCCCcChHHH--HHHHHHHHhCCCEE-EEEeCcc
Q 044384 6 VLVMPGPAQGHVIPL--LEFSQCLAKHGFRV-TFVNTDY 41 (322)
Q Consensus 6 v~~~p~p~~gH~~p~--~~la~~La~rGh~V-T~it~~~ 41 (322)
++++..|-+|+-... +.+|+.+++.||+| +++-...
T Consensus 16 ~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~D 54 (140)
T 2d1p_A 16 AIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYRE 54 (140)
T ss_dssp EEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEech
Confidence 344455556665554 56777888899999 8776543
No 263
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=20.02 E-value=1.2e+02 Score=25.07 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=24.3
Q ss_pred CeEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 044384 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (322)
Q Consensus 4 ~hv~~~p~p~~gH~~p~~~la~~La~rGh~VT~it~~ 40 (322)
.+++++.-.+.| --.+++++|+++|++|.++.-.
T Consensus 12 ~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 12 RRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356667644432 4568999999999999887654
Done!