Query 044386
Match_columns 598
No_of_seqs 237 out of 1623
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 02:49:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044386.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044386hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0753 KatE Catalase [Inorgan 100.0 8E-156 2E-160 1228.1 38.9 474 1-480 16-493 (496)
2 KOG0047 Catalase [Inorganic io 100.0 3E-155 7E-160 1200.9 31.3 473 1-480 24-500 (505)
3 PLN02609 catalase 100.0 3E-144 6E-149 1169.5 44.4 473 1-480 17-491 (492)
4 cd08154 catalase_clade_1 Clade 100.0 7E-144 1E-148 1163.8 44.2 468 1-475 2-469 (469)
5 PRK11249 katE hydroperoxidase 100.0 1E-139 3E-144 1180.7 43.5 473 1-480 77-564 (752)
6 cd08156 catalase_clade_3 Clade 100.0 1E-132 3E-137 1069.7 41.3 427 42-475 1-429 (429)
7 cd08155 catalase_clade_2 Clade 100.0 2E-130 4E-135 1054.7 41.1 430 39-475 1-443 (443)
8 cd08157 catalase_fungal Fungal 100.0 5E-130 1E-134 1060.2 43.1 444 26-476 1-451 (451)
9 cd00328 catalase Catalase heme 100.0 6E-127 1E-131 1028.1 39.8 427 42-475 1-433 (433)
10 PF00199 Catalase: Catalase; 100.0 2E-109 3E-114 889.5 30.8 383 2-385 1-383 (384)
11 cd08153 srpA_like Catalase-lik 100.0 3.1E-72 6.7E-77 582.5 30.9 293 33-341 2-295 (295)
12 cd08150 catalase_like Catalase 100.0 1.5E-67 3.3E-72 544.4 29.7 279 44-341 1-283 (283)
13 cd08151 AOS Allene oxide synth 100.0 6.6E-67 1.4E-71 549.9 29.4 289 31-340 10-327 (328)
14 cd08152 y4iL_like Catalase-lik 100.0 4.8E-64 1E-68 523.5 26.8 280 43-342 2-305 (305)
15 PF06628 Catalase-rel: Catalas 99.8 4.3E-19 9.3E-24 146.7 5.5 66 405-476 2-68 (68)
16 PF11304 DUF3106: Protein of u 62.5 20 0.00044 32.4 5.9 12 482-493 90-101 (107)
17 PF11304 DUF3106: Protein of u 43.4 72 0.0016 28.8 6.2 14 422-435 40-53 (107)
18 TIGR03784 marine_sortase sorta 32.7 32 0.00069 33.8 2.4 45 274-320 39-87 (174)
19 PF14174 YycC: YycC-like prote 31.8 32 0.0007 27.2 1.7 24 458-487 5-28 (53)
20 TIGR03092 SASP_sspI small, aci 28.9 54 0.0012 27.3 2.7 23 418-440 43-65 (65)
21 PF14098 SSPI: Small, acid-sol 27.1 57 0.0012 27.2 2.5 22 418-439 44-65 (65)
22 TIGR00695 uxuA mannonate dehyd 26.0 90 0.002 34.7 4.6 26 415-440 157-182 (394)
23 PF13945 NST1: Salt tolerance 23.5 50 0.0011 33.1 1.9 18 416-433 107-124 (190)
No 1
>COG0753 KatE Catalase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-156 Score=1228.09 Aligned_cols=474 Identities=50% Similarity=0.875 Sum_probs=456.5
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
|||++|+||.++++|+|+|.+||+||||++|+|||+||||||||||+|||||.||+|+|++++|++++|+|.+|+++||+
T Consensus 16 lT~~~G~pv~dnqnsltaG~rGP~llqD~~l~Ekl~hFdrErIPERvvHAkG~GA~G~F~~t~dis~yT~A~~f~e~Gk~ 95 (496)
T COG0753 16 LTTNQGAPVADNQNSLTAGPRGPTLLQDFHLLEKLAHFDRERIPERVVHAKGSGAHGYFEVTEDISKYTKAKLFQEVGKK 95 (496)
T ss_pred eeccCCCcccCcccceeccCCCCeehhhHHHHHHHHhhccccCcchheecccccceeEEEeccchHhhhcchhhcccCcc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFC 160 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl 160 (598)
|||+||||+|+|++|++|++||+||||+||||+||||||||||+||||||||+|||+|+|++||+|.|++++++++|||+
T Consensus 96 TP~fvRFSTV~g~~gsaDt~RD~RGFA~KfYTeeGNwDlVGNNtPVFFirDa~KFPdfiH~~Kp~P~t~l~~~~~~wDF~ 175 (496)
T COG0753 96 TPVFVRFSTVAGERGSADTVRDVRGFALKFYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHAQKPDPRTNLRDADTFWDFW 175 (496)
T ss_pred cceEEEEEeccCCCCCcccccccccceEEEeeccccceeeccCcceEEeeChhhchhhhhhcCCCCCcccccchhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHH
Q 044386 161 SHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDL 240 (598)
Q Consensus 161 ~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL 240 (598)
+.+|||+||++|+||+||||+||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||+++.|.|+||+++||
T Consensus 176 s~~PES~H~vt~l~SDrGiP~syR~M~GfgvHtf~~vN~~Ge~~~VKfH~k~~qGik~Lt-~~EA~ki~g~d~d~~~~dL 254 (496)
T COG0753 176 SLNPESLHQVTWLMSDRGIPASYRHMEGFGVHTFKFVNAKGKRVWVKFHFKPKQGIKNLT-WDEAAKLAGKDPDYHQRDL 254 (496)
T ss_pred hcCcHHHHHHHHHhcCCCCChhhhcCCCccceeEEEEcCCCCEEEEEEEEEeccccccCC-HHHHHHHhccCccHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceec
Q 044386 241 YDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYY 320 (598)
Q Consensus 241 ~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~p 320 (598)
+++|++|+||+|+|+||+|+++|+.+++|||+|+||+||++++|+++||+|+|||||+|+|+||||+||+|+|+||||++
T Consensus 255 ~eaIe~Gd~P~W~l~VQvm~~~da~k~~f~~~D~TKvWp~~~~P~~~VG~m~LnrNpdN~FaE~EQaAF~p~nlVPGi~f 334 (496)
T COG0753 255 YEAIENGDFPEWDLYVQVMPEEDAEKFDFDPLDLTKLWPEEDYPLIEVGTMVLNRNPDNFFAEVEQAAFAPGNLVPGIDF 334 (496)
T ss_pred HHHHHcCCCCceEEEEEecChhHhhcCCCCCCccccccccccCCceEeeEEEEccCccchhhhhhhhccccccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccCCCCCCCCC---CCCCCCCCcc
Q 044386 321 SNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRH---AERYPIPSDV 397 (598)
Q Consensus 321 S~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~~~~---~~~~~~~~~~ 397 (598)
|+|||||+|+|+|+|+|+||+|+||+|||||+|+|||+||||||+|++.++.+.+||+||+++..+. ...+..++.+
T Consensus 335 S~D~lLQgRlFsY~DtqryRlG~N~~qlPvN~P~~p~~~~qrDG~m~~~~~~g~~~y~Pn~~~~~~~~~~~~~~~~~~~~ 414 (496)
T COG0753 335 SPDPLLQGRLFSYGDTQRYRLGPNYHQIPVNRPKCPVHNNQRDGQMRMGINTGPANYEPNSFGDNPEAPEQPGFVEPPER 414 (496)
T ss_pred CCChhhhhccccchhhhHhhcCCCcccccCCCCCCcccccccCCccccccCCCCcccCccccccCccccccccccCCcee
Confidence 9999999999999999999999999999999999999999999999987665669999999975322 3446777788
Q ss_pred cccceee-eeeccCCCcccchhhhcCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhcChhhcCchHHHHHHHhC
Q 044386 398 ITGRREK-ACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQISGSEASFSSQCEAKHLK 476 (598)
Q Consensus 398 v~G~~~r-~~~~~~dDf~Qar~fyr~ls~~EqerLI~Nia~~L~d~~v~~eIqeR~l~~f~kVDpdlg~~~~~rVA~~L~ 476 (598)
++|.+.+ .....+|||+|||+||++|++.||++|+.||+++|+. .+.++||+||++||++||++|| ++||++||
T Consensus 415 ~~g~~~~~~~~~~~d~f~Q~~~~~~~~~~~ek~~l~~n~~~~l~~-v~~~~i~~r~~~~f~~~d~~~~----~~va~~lg 489 (496)
T COG0753 415 VEGDKQRRRAISDDDYFSQPRALYRSLSDAEKQHLVDNIAFELSK-VTDPEIKERVLDHFYKIDPDLG----KGVAKALG 489 (496)
T ss_pred eccchhhhccccccccchhHHHHHHhCCHHHHHHHHHHHHHHhhc-CCcHHHHHHHHHHHHhcCHHHH----HHHHHHhc
Confidence 9999885 4446789999999999999999999999999999983 3357999999999999999999 99999999
Q ss_pred CCcc
Q 044386 477 VSLE 480 (598)
Q Consensus 477 ~~~~ 480 (598)
+.++
T Consensus 490 ~~~~ 493 (496)
T COG0753 490 LALE 493 (496)
T ss_pred cccc
Confidence 8875
No 2
>KOG0047 consensus Catalase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-155 Score=1200.86 Aligned_cols=473 Identities=49% Similarity=0.842 Sum_probs=460.7
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
+||++|+||.++.+|+|+|++||+||||++|+|+|+||||||||||+|||||+||+|+||||+||+++|+|.+|+++||+
T Consensus 24 ~Tt~~G~Pi~~~~a~~tvG~rGPiLlQD~~lld~~ahFDRERIPERVvHAkGagA~GyFEvThDIt~~~~a~~f~kvgk~ 103 (505)
T KOG0047|consen 24 ITTSNGAPIGNKTASQTVGPRGPILLQDYHLLDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYCKADIFSKVGKQ 103 (505)
T ss_pred EEcCCCCcccCCcceeecCCCCCeeeehhHHHHHHhhcchhcCchhhhccccCcceeEEEeechHHHHHHHHHHhhcccc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFC 160 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl 160 (598)
||++||||+|+|++|++||+||+|||||||||+|||||||+||+||||||||++||.|||++||+|+|+++|++++||||
T Consensus 104 Tp~~vRFSTV~gE~GSaDT~RDPRGFAvKFYTeeGn~DlVgNNtPVFFiRDpikFP~fIHtqKrNPQthlkD~~m~wDf~ 183 (505)
T KOG0047|consen 104 TPVLVRFSTVGGESGSADTARDPRGFAVKFYTEEGNWDLVGNNTPVFFIRDPIKFPSFIHTQKRNPQTHLKDPDMFWDFL 183 (505)
T ss_pred CceEEEEEeecccCCCcccccCCCcceEEEEeccccceeecCCcceEEeecccccchhhhccCCCchhcccCcchhHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHH
Q 044386 161 SHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDL 240 (598)
Q Consensus 161 ~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL 240 (598)
+.+|||+||+++||||||+|++|++|++||+|||+|+|++|+.+||||||+|.+|+++|+ .++|.++++.+|||.++||
T Consensus 184 t~~pEslHqv~~lFsDrGtP~~yrhM~Gyg~hTyk~vNk~G~~~YvkfH~ktdqGiKnLt-~e~A~~l~gs~pdya~~DL 262 (505)
T KOG0047|consen 184 TLRPESLHQVMFLFSDRGTPDGYRHMNGYGSHTYKMVNKEGKAHYVKFHFKTDQGIKNLT-VEEAARLAGSDPDYAIRDL 262 (505)
T ss_pred hcCHhhhhheeeeeccCCCCcccccccccccceEEEEccCCceEEEEEEEecCCCcccCC-HHHHHHhcCCCccHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceec
Q 044386 241 YDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYY 320 (598)
Q Consensus 241 ~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~p 320 (598)
+++|++|+||+|+|+||+|+++++++++|||+|.||+||++++|+++||+|+||+|+.|||+|+||+||+|+|+||||++
T Consensus 263 f~aI~~gnyPsW~~yIQvMt~~qa~K~~fnpfDvTKvWP~~~~PL~~VGk~vLn~Np~NyFaevEQ~AF~Pa~~VPGIe~ 342 (505)
T KOG0047|consen 263 FNAIENGNYPSWTMYIQVMTPEQAEKFRFNPFDVTKVWPHKDYPLIPVGKMVLNRNPDNYFAEVEQAAFSPAHIVPGIEP 342 (505)
T ss_pred HHHHHcCCCCceEEEEEeeCHhHhhcCCCCccceeccccCcCccccccceEEecCCchHHHHHHHHhccCccccCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCC-CCCCCCCCCCcccc-cCCCCCCcccCCCCCCCCCCCC-CCCCCcc
Q 044386 321 SNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-CPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAER-YPIPSDV 397 (598)
Q Consensus 321 S~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~-~~v~n~~rDG~m~~-~~~~~~~nY~Pns~~~~~~~~~-~~~~~~~ 397 (598)
|+|+|||+|+|+|+||||+|||+||.|||||||+ |-++|+||||+|++ +|+|+.|||.||++..+...++ +.+.+..
T Consensus 343 S~Dk~LQ~RlFSY~DthRHRLGpNy~QlPVNcPy~~~~~n~qrDG~Mn~~~nqg~~pNYfpn~~~~~~~~~~~~~~~~~~ 422 (505)
T KOG0047|consen 343 SPDKMLQGRLFSYPDTHRHRLGPNYLQLPVNCPYRVRAHNFQRDGPMNVNDNQGGAPNYFPNSFSGPRQQPDPVLEHTEV 422 (505)
T ss_pred CCchhheeeeeccCcccccccCCCeeecccCCCccccccccccCCceeeccCCCCCCCcCcccCCccccCCccccCCcee
Confidence 9999999999999999999999999999999999 77889999999999 5899999999999987766654 6677788
Q ss_pred cccceeeeeeccCCCcccchhhhc-CCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhcChhhcCchHHHHHHHhC
Q 044386 398 ITGRREKACIEKENNFKQPGERYR-SWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQISGSEASFSSQCEAKHLK 476 (598)
Q Consensus 398 v~G~~~r~~~~~~dDf~Qar~fyr-~ls~~EqerLI~Nia~~L~d~~v~~eIqeR~l~~f~kVDpdlg~~~~~rVA~~L~ 476 (598)
++|.+.|+.+.+++||+|||+||+ .|++++|+|||.||++||+ .+...||+||+++|.+||+||| +.++++|+
T Consensus 423 ~~G~~yr~~~~~d~nf~Qpr~fy~~vl~~~q~kr~v~n~~~hl~--~~~~~iq~r~~~~ft~v~~dlG----~~l~~~l~ 496 (505)
T KOG0047|consen 423 ASGDVYRYEIGDDNNFEQPRAFYEKVLDKEQQKRLVQNIAGHLS--EARDFIQKRAVKYFTQVHKDLG----RALAEALN 496 (505)
T ss_pred eecceEEeeccCcccccchHHHHHHHhcHHHHHHHHHHHHHHhh--cchHHHHHHHHHHHHhhchHHH----HHHHHHhc
Confidence 999999999888999999999998 5899999999999999999 5788899999999999999999 99999998
Q ss_pred CCcc
Q 044386 477 VSLE 480 (598)
Q Consensus 477 ~~~~ 480 (598)
+..+
T Consensus 497 ~~~~ 500 (505)
T KOG0047|consen 497 VKKA 500 (505)
T ss_pred CCcc
Confidence 8764
No 3
>PLN02609 catalase
Probab=100.00 E-value=2.7e-144 Score=1169.49 Aligned_cols=473 Identities=80% Similarity=1.349 Sum_probs=457.9
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
+||++|+||.++++|+|+|.+||+||||+||+|||+||+|||||+|++||||+||+|+|++++|++++|+|++|+++||+
T Consensus 17 ~Tt~~G~pv~~~~~s~t~g~~Gp~llqD~~l~eklahFdrErIpeR~vHAKG~ga~G~F~~t~d~s~~t~a~~f~~~g~~ 96 (492)
T PLN02609 17 FTTNSGAPVWNNNSSLTVGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISNLTCADFLRAPGVQ 96 (492)
T ss_pred cCcCCCeeCCCCccceecCCCCcchhhhHHHHHhhcccccccccccccccccceEEEEEEECCchhHHHhhhhccCCCce
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFC 160 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl 160 (598)
|||++|||+++|+++++|+.+|+|||||||++++|+|||||||+||||++||++|++||||+|++|.|+++||+++|+|+
T Consensus 97 ~pv~vRFS~~~G~~~s~D~~rd~RG~AiKf~~~~g~~D~v~nn~PvFf~rdp~~Fpd~i~a~k~~P~t~~~dp~~~~dF~ 176 (492)
T PLN02609 97 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDMVGNNFPVFFIRDGMKFPDMVHALKPNPKTHIQEPWRILDFL 176 (492)
T ss_pred eeEEEEcccCCCCCCCCCcCCCCCeeEEEEEcCCCceeEeeecCceeecCCHHHhhHHHhhcCCCCCCCCCChhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHH
Q 044386 161 SHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDL 240 (598)
Q Consensus 161 ~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL 240 (598)
+.|||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.+++|.++|||++||
T Consensus 177 ~~~PEs~h~~~~l~s~rg~P~syr~~~~~gvhtF~~vn~~G~~~~Vk~h~~p~~G~~~l~-~eeA~~~~g~~~d~l~~DL 255 (492)
T PLN02609 177 SHHPESLHMFTFLFDDRGIPQDYRHMEGFGVHTYKLINKAGKAHYVKFHWKPTCGVKNLL-DEEAVRVGGSNHSHATQDL 255 (492)
T ss_pred hcChHHHHHHHHHhcCCCCCCCcccCCcccccceEEECCCCCEEEEEEEEEeCCCCCCCC-HHHHHHhhCCCCcHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceec
Q 044386 241 YDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYY 320 (598)
Q Consensus 241 ~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~p 320 (598)
+++|++|++|+|+|+||||+++|+.+|+|||+|+||+||++++|+++||+|+||++++|+|++|||++|+|+++||||++
T Consensus 256 ~~~I~~G~~P~w~l~vQv~~~~d~~~~~f~~~D~Tk~WP~~~~p~i~vG~l~Ln~np~n~f~e~eq~aF~P~~lvpGI~~ 335 (492)
T PLN02609 256 YDSIAAGNYPEWKLFIQTMDPEDEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNRNIDNFFAENEQLAFCPAIVVPGIYY 335 (492)
T ss_pred HHHHhcCCCceeEEEEEEcCHHHHhcCCCCCCcCCceeCcccceeeEeEEEEEecCCcchhhhhhhhccccccCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccCCCCCCCCCCCCCCCCCccccc
Q 044386 321 SNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITG 400 (598)
Q Consensus 321 S~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~~~~~~~~~~~~~~v~G 400 (598)
|+|||||+|+|||+|||++|+|+||+|||||||+|+++||||||+|++.++++.|||+||++++++..+.+..++..+.|
T Consensus 336 S~DpmLq~R~faY~ds~~~Rlg~N~~qlPvN~p~~~~~n~~rdG~m~~~~~~~~~nY~pn~~~~~~~~~~~~~~~~~~~g 415 (492)
T PLN02609 336 SDDKLLQTRIFAYADTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPVRHAERVPIPHPPLSG 415 (492)
T ss_pred CCCcccccccccchhHhhccCCCChhhCcccCCCCCcCCCCcCCCccccCCCCCCCccCCCCCCCccCCCcCCCCceecc
Confidence 99999999999999999999999999999999999999999999999986789999999999987766666677778889
Q ss_pred ceeeeeeccCCCcccchhhhcCCCHHHHHHHHHHHHHHcCCCCCCH--HHHHHHHHHHHhcChhhcCchHHHHHHHhCCC
Q 044386 401 RREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTH--EVRSIWVSYWSQISGSEASFSSQCEAKHLKVS 478 (598)
Q Consensus 401 ~~~r~~~~~~dDf~Qar~fyr~ls~~EqerLI~Nia~~L~d~~v~~--eIqeR~l~~f~kVDpdlg~~~~~rVA~~L~~~ 478 (598)
.+.++.+.++|||+|||+||++|+++||+|||+||+++|+ .|++ +||.||+++|++||+||| ++||++|+++
T Consensus 416 ~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~~lv~n~~~~l~--~~~~~~~~r~~~~~~~~~~d~~lg----~~v~~~~~~~ 489 (492)
T PLN02609 416 RREKCKIEKENNFKQPGERYRSWSPDRQERFIKRWVDALS--DPRVTHEIRSIWISYWSQCDKSLG----QKLASRLNVK 489 (492)
T ss_pred ceEEccCCCCCcccchhHHHHhCCHHHHHHHHHHHHHHhh--cCchhHHHHHHHHHHHHHhCHHHH----HHHHHHhCCC
Confidence 8888776678999999999999999999999999999999 5755 578888999999999999 9999999976
Q ss_pred cc
Q 044386 479 LE 480 (598)
Q Consensus 479 ~~ 480 (598)
..
T Consensus 490 ~~ 491 (492)
T PLN02609 490 PS 491 (492)
T ss_pred CC
Confidence 53
No 4
>cd08154 catalase_clade_1 Clade 1 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 1 catalases are found in bacteria, algae, and plants; they have a relatively small subunit size of 55 to 69 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. They appear to form tetramers. In eukaryotic cells, catalases are located in peroxisomes.
Probab=100.00 E-value=6.8e-144 Score=1163.79 Aligned_cols=468 Identities=60% Similarity=1.004 Sum_probs=457.6
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
+||++|+||.++++|+|+|.+||+||||++|+|||+||+||+|++|++||||+||+|+|++++|++++|+|++|+++||+
T Consensus 2 ~t~~~G~pv~~~~~s~t~g~~Gp~llqD~~l~ekl~hf~reripeR~vHAKG~ga~G~F~vt~d~~~~t~a~~f~~~g~~ 81 (469)
T cd08154 2 LTTNQGAPVGDNQNSQTVGPRGPVLLEDYHLIEKLAHFDRERIPERVVHARGAGAHGYFEAYGDISDYTRASFLQEPGKK 81 (469)
T ss_pred ccCCCCcCcCCcccceecCCCCCchhhhHHHHHHhhhhccCCCccccccCceeeEEEEEEECCchhHHHhhhhccCCCcc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFC 160 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl 160 (598)
|||++|||+++|+++++|+.+|+|||||||++++|+|||||||+||||++||++|++||||+|++|.|+++||+++|+|+
T Consensus 82 ~Pv~vRFS~~~g~~~~~D~~rd~RGfAvKf~~~eg~~Dlv~nn~PvFfird~~~Fp~~i~a~k~~P~t~~~dp~~~~dF~ 161 (469)
T cd08154 82 TPVFVRFSTVIHGKGSPETLRDPRGFAVKFYTEEGNWDLVGNNLPVFFIRDAIKFPDMIHALKPSPVTNIQDPNRIFDFF 161 (469)
T ss_pred ceeEEecccCCCCCCCCccCCCCCeeEEEEEcCCCceeeeeecCCccccCCHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHH
Q 044386 161 SHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDL 240 (598)
Q Consensus 161 ~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL 240 (598)
+.|||++|+++|++++||+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.+++|.++|||++||
T Consensus 162 ~~~PEs~h~~~~l~s~rg~P~sy~~~~g~gvhtf~~vn~~G~~~~VK~h~~p~~G~~~l~-~eeA~~~~g~~~d~l~~dL 240 (469)
T cd08154 162 SHVPESTHMLTFLYSDWGTPASYRHMDGSGVHTYKWVNAEGKVVYVKYHWKPKQGVKNLT-AEEAAEVQGKNFNHATQDL 240 (469)
T ss_pred HcChHHHHHHHHHhcCCCCCCCcccCCccccceeEEEcCCCCEEEEEEEEEeCCCCCCCC-HHHHHHhhcCCCcHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceec
Q 044386 241 YDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYY 320 (598)
Q Consensus 241 ~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~p 320 (598)
+++|++|++|+|+|+||||+++|+.+++|||+|+||+||++++|+++||+|+||++++|+|++|||++|+|+++||||++
T Consensus 241 ~~~I~~G~~p~w~l~vQv~~~~D~~~~~f~~~D~Tk~WP~~~~p~i~vG~l~Ln~np~n~f~e~eq~aF~P~~lvpGI~~ 320 (469)
T cd08154 241 YDAIAAGNYPEWELYVQIMDPKDLDKLDFDPLDDTKIWPEDQFPLKPVGKMTLNKNPDNFFAEVEQVAFSPGNLVPGIEP 320 (469)
T ss_pred HHHHhcCCCceEEEEEEEcCHHHhhcCCCCCCcCCcccCCcccceEEeEEEEEecCCcchhhhhhhhhccccCCCCCcCC
Confidence 99999998899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccCCCCCCCCCCCCCCCCCccccc
Q 044386 321 SNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITG 400 (598)
Q Consensus 321 S~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~~~~~~~~~~~~~~v~G 400 (598)
|+|||||+|+|||+|||++|+|+||+|||||||+|+|+||||||+|++.++++.|||+|||++++...+.+..++..++|
T Consensus 321 S~DpmLq~R~faY~ds~r~Rlg~N~~qlPvN~p~~~~~~~~rdG~m~~~~~~~~~nY~pns~~~~~~~~~~~~~~~~~~g 400 (469)
T cd08154 321 SDDKMLQGRLFSYSDTQRYRLGPNYLQLPINAPKAAVHNNQRDGQMNYGHDTSDVNYEPSRLDGLPEAPKYPYSQPPLSG 400 (469)
T ss_pred CCCcccccccccchhHhhccCCCChhhCCCCCCCCCCCCCCcCCCccccCCCCCCcccCCCCCCCccCCCcCCCCeeEee
Confidence 99999999999999999999999999999999999999999999999988889999999999987777777778889999
Q ss_pred ceeeeeeccCCCcccchhhhcCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhcChhhcCchHHHHHHHh
Q 044386 401 RREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQISGSEASFSSQCEAKHL 475 (598)
Q Consensus 401 ~~~r~~~~~~dDf~Qar~fyr~ls~~EqerLI~Nia~~L~d~~v~~eIqeR~l~~f~kVDpdlg~~~~~rVA~~L 475 (598)
.+.++.+.++|||+|||+||++|+++||+|||+||+++|+ .|+++||+||+++|++||++|| ++||++|
T Consensus 401 ~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~i~~r~~~~~~~~d~~~~----~~v~~~~ 469 (469)
T cd08154 401 TTQQAPIAKTNNFKQAGERYRSFSEEEQENLIKNLVVDLS--DVNEEIKLRMLSYFSQADPDYG----ERVAEGL 469 (469)
T ss_pred eEEeccCCCCCcccCcHHHHHhCCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHhCHHHH----HHHHhhC
Confidence 9988877778999999999999999999999999999999 6889999999999999999999 9999875
No 5
>PRK11249 katE hydroperoxidase II; Provisional
Probab=100.00 E-value=1.3e-139 Score=1180.72 Aligned_cols=473 Identities=44% Similarity=0.773 Sum_probs=452.8
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
|||++|+||.++++|+|+|.+||+||||++|+|||+||||||||||+|||||.||+|+|+++++++++|+|.+|+++|++
T Consensus 77 ~tt~~G~pv~~~~~sl~~g~~Gp~ll~D~~l~ekl~hFdrEriPER~vHAkG~~a~G~F~~t~~~s~~t~A~~f~~~g~~ 156 (752)
T PRK11249 77 LTTNQGVRIADDQNSLRAGSRGPSLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKAAFLQDPGKI 156 (752)
T ss_pred eecCCCeecCCcccceecCCCCCchhhhHHHHHhhcccccccCchhheecccceEEEEEEECccHHHhhhcccccCCCce
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCC----hHHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE----YWRI 156 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d----~~~~ 156 (598)
|||++|||+++|++|++|+.||+|||||||||+||||||||||+|||||+||++|++|+||+|++|.+++++ ++++
T Consensus 157 tPv~~RFStv~G~~gs~Dt~rd~RGfAvKFyt~eGn~Dlvgnn~PvFfi~d~~kFpd~iha~k~~P~~~~~~~~~~~~~~ 236 (752)
T PRK11249 157 TPVFVRFSTVQGPRGSADTVRDIRGFATKFYTEEGNFDLVGNNTPVFFIQDAIKFPDFVHAVKPEPHNEIPQGQSAHDTF 236 (752)
T ss_pred eeEEEecccCCCCCCCCCcCCCCCceEEEEEcCCCccceeeecCcceecCCHHHhhHHHhhcCCCCCccCcccCCChHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997765 8999
Q ss_pred HHHHHhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchh
Q 044386 157 LDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHA 236 (598)
Q Consensus 157 ~dfl~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl 236 (598)
|||++.|||++|+++|+||+|++|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++++ ++||.++.+.|+||+
T Consensus 237 ~dF~s~~Pes~h~~~~~~s~r~~P~s~r~~~gfgvhtF~~vna~G~~~~VKfh~kP~~G~~~l~-~~Ea~~~~~~dpDfl 315 (752)
T PRK11249 237 WDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPVAGKASLV-WDEAQKLTGRDPDFH 315 (752)
T ss_pred HHHHhcChHHHHHHHHHhcCCCCCCCcccCCcccccceEEEcCCCCEEEEEEEEEECCccccCC-HHHHHHhcCCCccHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999989999999
Q ss_pred HHHHHHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCC
Q 044386 237 TQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVP 316 (598)
Q Consensus 237 ~~dL~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvp 316 (598)
++||+++|++|+||+|+|+||||+++|+++|+|||+|+||+|||+++|+++||||+||++++|+|++|||++|+|+|+||
T Consensus 316 r~DL~eaIe~G~~P~WeL~VQl~~~~d~~~~~f~i~D~TK~WPe~~~P~~~VGkLtLnrn~~n~fae~eqvaF~P~~lvp 395 (752)
T PRK11249 316 RRDLWEAIEAGDYPEYELGVQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAETEQVAFHPGHIVP 395 (752)
T ss_pred HHHHHHHHHcCCCceEEEEEEEcChHHhccCCCCCCcCCccCCcccCcceEeEEEEecCCCCcchhhhheeeccCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceecCCChhhHhhhhhhHHHhHhhcC-CCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccCCCCCC--CCCC-----
Q 044386 317 GIYYSNDKMLQCRIFAYGDTQRHRLG-PNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDP--TRHA----- 388 (598)
Q Consensus 317 Gi~pS~DpilqaR~~aY~dS~~~Rlg-~N~~qlPvN~P~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~--~~~~----- 388 (598)
||++|+|||||+|+|+|.|||++|+| +||+|||||||+||++||||||+|++.++.+.|||+|||+++ +...
T Consensus 396 GI~~S~DplLq~R~fsY~dtq~~Rlgg~N~~qlpvN~p~~~~~n~~rdG~~~~~~~~g~~~Y~pns~~~~~~~~~~~~~~ 475 (752)
T PRK11249 396 GIDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMTIDTGPANYEPNSINGNWPRETPPAPK 475 (752)
T ss_pred CccCCCCcccccccccchHHhhccCCCCchhhcccccccCCcCCCCcCCCCcccCCCCCCcccCCCCCCCCcccCccccc
Confidence 99999999999999999999999997 999999999999999999999999998766799999999964 2222
Q ss_pred -CCCCCCCcccccceeeeeec-cCCCcccchhhhcCCCHHHHHHHHHHHHHHcCCCCCC-HHHHHHHHHHHHhcChhhcC
Q 044386 389 -ERYPIPSDVITGRREKACIE-KENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVT-HEVRSIWVSYWSQISGSEAS 465 (598)
Q Consensus 389 -~~~~~~~~~v~G~~~r~~~~-~~dDf~Qar~fyr~ls~~EqerLI~Nia~~L~d~~v~-~eIqeR~l~~f~kVDpdlg~ 465 (598)
..+..++..++|.+.|+... .+|||+|||+||++|++.||+|||+|++++|+ +|. ++||+||+++|.+||++||
T Consensus 476 ~~~~~~~~~~~~g~~~r~~~~~~~d~~~Q~~~~~~~~~~~e~~~~~~~~~~~l~--~v~~~~i~~r~~~~~~~vd~~l~- 552 (752)
T PRK11249 476 RGGFESYQERVEGNKVRERSPSFGDYYSQPRLFWLSQTPIEQRHIIDAFSFELG--KVVRPYIRERVVDQLAHIDLTLA- 552 (752)
T ss_pred ccCccCCCceeeccEEeccCCCCCccccccHHHHhcCCHHHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHHHHHHH-
Confidence 22445667889988887764 57999999999999999999999999999999 675 8999999999999999999
Q ss_pred chHHHHHHHhCCCcc
Q 044386 466 FSSQCEAKHLKVSLE 480 (598)
Q Consensus 466 ~~~~rVA~~L~~~~~ 480 (598)
++||++||+++.
T Consensus 553 ---~~va~~l~~~~~ 564 (752)
T PRK11249 553 ---QAVAENLGIPLT 564 (752)
T ss_pred ---HHHHHHhCCCCC
Confidence 999999999654
No 6
>cd08156 catalase_clade_3 Clade 3 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 3 catalases are the most abundant subfamily and are found in all three kingdoms of life; they have a relatively small subunit size of 43 to 75 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. Clade 3 catalases also bind NADPH as a second redox-active cofactor. They form tetramers, and in eukaryotic cells, catalases are located in peroxisomes.
Probab=100.00 E-value=1.4e-132 Score=1069.66 Aligned_cols=427 Identities=45% Similarity=0.783 Sum_probs=415.8
Q ss_pred CCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeec
Q 044386 42 RIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLG 121 (598)
Q Consensus 42 ~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~ 121 (598)
|||||++||||+||+|+|++++|++++|+|++|+++||+|||++|||+++|++|++|+.||+|||||||||+||+|||||
T Consensus 1 rIPER~vHAKG~ga~G~F~~t~d~s~~t~A~~f~~~gk~tPv~vRFStv~G~~gs~Dt~rd~RGfAvKF~t~eG~~DlV~ 80 (429)
T cd08156 1 RIPERVVHAKGAGAFGTFEVTHDITKYTKAKIFSEVGKKTPVFVRFSTVAGERGSADTERDPRGFALKFYTEEGNWDLVG 80 (429)
T ss_pred CCCcccccCccceEEEEEEECCCchHHHhhhhccCCCceeeEEEecccCCCCCCCCccCCCcCeEEEEEEcCCCceeeee
Confidence 79999999999999999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred cCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCC
Q 044386 122 NSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNG 201 (598)
Q Consensus 122 nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G 201 (598)
||+||||++||++|++|+|++||+|.|+++|++++|+|++.|||++|+++|++++||+|+||++|+|||+|||+|+|++|
T Consensus 81 nn~PvFfirdp~~Fp~~i~a~k~~P~t~~~d~~~~~df~~~~Pes~h~~~~l~s~rg~P~sy~~~~~~gvhtf~~vn~~G 160 (429)
T cd08156 81 NNTPVFFIRDPIKFPDFIHTQKRNPQTNLKDPDMFWDFWSLSPESLHQVTILFSDRGIPDGYRHMNGYGSHTFSLVNAKG 160 (429)
T ss_pred ecCcccccCCHHHhhHhhhccCCCCCCCCCCHHHHHHHHhcChHHHHHHHHHhcCCCCCCCcccCCccccceEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHHHHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCC
Q 044386 202 KVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPED 281 (598)
Q Consensus 202 ~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~ 281 (598)
+.+||||||+|.+|+++|+ ++||.+++|.++|||++||+++|++|++|+|+|+||||+++|+.+++|||+|+||+||++
T Consensus 161 ~~~~Vk~h~~p~~G~~~l~-~eea~~~~g~~~d~l~~dL~~~I~~G~~P~w~l~vQv~~~~d~~~~~f~~~D~Tk~Wp~~ 239 (429)
T cd08156 161 ERFWVKFHFKTDQGIKNLT-NEEAAELAGEDPDYAQRDLFEAIERGDFPSWTLYVQVMPEEDAEKYRFNPFDLTKVWPHK 239 (429)
T ss_pred CEEEEEEEEEeCCCCCCCC-HHHHHHhhCCCCCHHHHHHHHHHhcCCCceEEEEEEEechhHhhcCCCCCCcCCccCCcc
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCcEeeEEEEeCCCCCchhhhccccceecccCCCceecCCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCCCCCCC
Q 044386 282 IIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNH 361 (598)
Q Consensus 282 ~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~pS~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~v~n~~ 361 (598)
++|+++||+|+||++++|+|++|||++|+|+++||||++|+|||||+|+|||+|||++|+|+||+|||||||+|+++|||
T Consensus 240 ~~p~i~vG~l~Ln~n~~n~f~e~eq~aF~P~~lvpGI~~S~Dp~Lq~R~faY~dt~~~Rlg~N~~qlPvN~p~~~~~n~~ 319 (429)
T cd08156 240 DYPLIEVGKLELNRNPENYFAEVEQAAFSPSNLVPGIGFSPDKMLQGRLFSYADAHRYRLGVNYHQLPVNRPKCPVNNYQ 319 (429)
T ss_pred CcceEEeEEEEEecCCcchhhhhheecccCcCCCCCccCCCCccccccccccHhhhhcCCCCCHhhCCCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccc-CCCCCCcccCCCCCCCCCCCCCCCCCcccccceeeeeec-cCCCcccchhhhcCCCHHHHHHHHHHHHHHc
Q 044386 362 YDGFMNFM-HRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIE-KENNFKQPGERYRSWAPDRQERFLNRWIKAL 439 (598)
Q Consensus 362 rDG~m~~~-~~~~~~nY~Pns~~~~~~~~~~~~~~~~v~G~~~r~~~~-~~dDf~Qar~fyr~ls~~EqerLI~Nia~~L 439 (598)
|||+|++. ++++.|||+|||++++...+.+..++..++|.+.|+.+. ++|||+|||+|||+|+++||+|||+||+++|
T Consensus 320 rdG~m~~~~~~~~~~nY~pns~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~d~f~Q~~~~~~~~~~~~q~~li~n~a~~l 399 (429)
T cd08156 320 RDGAMRVDGNGGGAPNYEPNSFGGPPEDPEYAEPPLPVSGDADRYNYRDDDDDYTQAGDLYRLVSEDERERLVENIAGHL 399 (429)
T ss_pred cCCCccccCCCCCCCcccCCCCCCCccCCCcCCCCceEeeeEEEccccCccchhhhhHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999997 677799999999998776667777788899999988765 7799999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcChhhcCchHHHHHHHh
Q 044386 440 CDPRVTHEVRSIWVSYWSQISGSEASFSSQCEAKHL 475 (598)
Q Consensus 440 ~d~~v~~eIqeR~l~~f~kVDpdlg~~~~~rVA~~L 475 (598)
+ +|+++||+||+++|++||+||| ++||++|
T Consensus 400 ~--~v~~~i~~r~~~~~~~~d~~lg----~~va~~l 429 (429)
T cd08156 400 K--GAPEFIQERQVAHFYKADPDYG----ERVAKAL 429 (429)
T ss_pred h--CCCHHHHHHHHHHHHhhCHHHH----HHHHhhC
Confidence 9 6899999999999999999999 9999875
No 7
>cd08155 catalase_clade_2 Clade 2 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 2 catalases are mostly found in bacteria and fungi; they have a large subunit size of 75 to 84 kDa, and bind a heme d group buried deep inside the structure. They appear to form tetramers. In eukaryotic cells, catalases are located in peroxisomes.
Probab=100.00 E-value=1.7e-130 Score=1054.72 Aligned_cols=430 Identities=47% Similarity=0.804 Sum_probs=412.6
Q ss_pred CCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCcee
Q 044386 39 ARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWD 118 (598)
Q Consensus 39 ~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~D 118 (598)
+|||||||++||||+||+|+|++++|++++|+|++|+++|++|||++|||+++|+++++|+.+|+|||||||++++|+||
T Consensus 1 ~rErIPER~vHAKG~ga~G~F~~t~d~~~~t~a~~f~~~g~~~pv~~RFS~~~g~~~s~D~~rd~RG~AiKf~~~~g~~D 80 (443)
T cd08155 1 DHERIPERVVHARGSGAHGYFQVYESLSQYTKAKFLQDPGKKTPVFVRFSTVAGSRGSADTVRDVRGFAVKFYTEEGNYD 80 (443)
T ss_pred CCccCccccccccccceEEEEEECCchhHHHhhhhccCCCceeeEEEEcccCCCCCCCCccCCCCCeEEEEEEcCCCcee
Confidence 69999999999999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred eeccCCCcccccChHHHHHHHHHhCCCCCCCCCCh----HHHHHHHHhCchhHhHHHHhhcCCCCCCCcCCCCCccccce
Q 044386 119 LLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEY----WRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTF 194 (598)
Q Consensus 119 lV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~----~~~~dfl~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf 194 (598)
|||||+||||++|+++|++||||+|++|.|+++|| +++|+|++.|||++|+++|++++||+|.||++|+|||+|||
T Consensus 81 ~v~nn~PvFf~rd~~~Fp~~i~a~k~~P~t~~~dp~~~~~~~~dF~~~~Pes~h~~~~l~s~rg~P~sy~~~~~~gvhtf 160 (443)
T cd08155 81 LVGNNIPVFFIQDAIKFPDLIHAVKPEPHNEMPQAQSAHDTFWDFVSLQPESAHMVMWAMSDRAIPRSYRMMEGFGVHTF 160 (443)
T ss_pred eeeecCCceecCCHHHhhHHHhhccCCCCCCCCCcchhhhhHHHHHhcChHHHHHHHHHhcCCCCCCCcccCCcccccce
Confidence 99999999999999999999999999999999998 56999999999999999999999999999999999999999
Q ss_pred EeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHHHHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCC
Q 044386 195 TLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDV 274 (598)
Q Consensus 195 ~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~ 274 (598)
+|+|++|+.+||||||+|.+|+++|+ ++||.++++.++|||++||+++|++|+||+|+|+||||+++|+.+++|||+|+
T Consensus 161 ~~vna~G~~~~Vk~~~~p~qG~~~l~-~eeA~~~~~~~~d~l~~dL~~~I~~G~~p~w~l~vQv~~~~d~~~~~f~~~D~ 239 (443)
T cd08155 161 RLVNAQGKSTFVKFHWKPVLGVHSLV-WDEAQKIAGKDPDFHRRDLWEAIESGDYPEWELGVQLIDEEDEFKFDFDILDP 239 (443)
T ss_pred EEEcCCCCEEEEEEEEEeCCCCCCCC-HHHHHHhhCCCCchHHHHHHHHHhcCCCceEEEEEEEcCHHHHhcCCCCCCcC
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceecCCChhhHhhhhhhHHHhHhhc-CCCCCCCCCCCC
Q 044386 275 TKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAP 353 (598)
Q Consensus 275 Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~pS~DpilqaR~~aY~dS~~~Rl-g~N~~qlPvN~P 353 (598)
||+||++++|+|+||+|+||++++|+|++|||++|+|+++||||++|+|||||+|+|||+|||+||+ |+||+|||||||
T Consensus 240 Tk~WP~~~~p~i~~G~l~Ln~np~n~f~e~eq~aF~P~~lvpGI~~S~DpmLq~R~faY~ds~r~RlgG~N~~qlPvN~P 319 (443)
T cd08155 240 TKLIPEELVPVQRVGKMVLNRNPDNFFAETEQVAFCPANVVPGIDFSNDPLLQGRLFSYLDTQLSRLGGPNFHELPINRP 319 (443)
T ss_pred CCcCCccccceEEeEEEEEecCCcchhhhhhhhcccCcCCCCCccCCCCcccccccccchHhhhccCCCCChhhCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 799999999999
Q ss_pred CCCCCCCCCCCcccccCCCCCCcccCCCCCCCCC--CC----CCCCCCcccccceeeeeecc-CCCcccchhhhcCCCHH
Q 044386 354 KCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRH--AE----RYPIPSDVITGRREKACIEK-ENNFKQPGERYRSWAPD 426 (598)
Q Consensus 354 ~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~~~~--~~----~~~~~~~~v~G~~~r~~~~~-~dDf~Qar~fyr~ls~~ 426 (598)
+|+|+||||||+|++.++++.|||+|||+++... .+ .+..++..++|.+.++.+.+ +|||+|||+||++|+++
T Consensus 320 ~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~Q~~~ly~~~~~~ 399 (443)
T cd08155 320 VCPVHNNQRDGHMRMTINKGRVNYFPNSLGAGPPRAASPAEGGFVHYPEKVEGPKIRIRSESFADHYSQARLFWNSMSPV 399 (443)
T ss_pred cCCcCCCCcCCCccccCCCCCCcccCCCCCCCCccccccccccccCCccceecceEecccCCCCccccccHHHHhcCCHH
Confidence 9999999999999998766799999999987432 22 35566778999988877655 79999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCC-HHHHHHHHHHHHhcChhhcCchHHHHHHHh
Q 044386 427 RQERFLNRWIKALCDPRVT-HEVRSIWVSYWSQISGSEASFSSQCEAKHL 475 (598)
Q Consensus 427 EqerLI~Nia~~L~d~~v~-~eIqeR~l~~f~kVDpdlg~~~~~rVA~~L 475 (598)
||+|||+||+++|+ .|+ ++||+||+++|++||+||| ++|+++|
T Consensus 400 e~~~lv~n~~~~l~--~~~~~~i~~~~~~~f~~~d~~~g----~~v~~~l 443 (443)
T cd08155 400 EKEHIISAFTFELS--KVETPEIRERVVDHLANIDEDLA----KKVAKGL 443 (443)
T ss_pred HHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHhhCHHHH----HHHHhhC
Confidence 99999999999999 677 7999999999999999999 9999875
No 8
>cd08157 catalase_fungal Fungal catalases similar to yeast catalases A and T. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. This family of fungal catalases has a relatively small subunit size, and binds a protoheme IX (heme b) group buried deep inside the structure. Fungal catalases also bind NADPH as a second redox-active cofactor. They form tetramers; in eukaryotic cells, catalases are typically located in peroxisomes. Saccharomyces cerevisiae catalase T is found in the cytoplasm, though.
Probab=100.00 E-value=5.4e-130 Score=1060.21 Aligned_cols=444 Identities=43% Similarity=0.739 Sum_probs=425.4
Q ss_pred cchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCc
Q 044386 26 LEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRG 105 (598)
Q Consensus 26 l~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~tPv~vRFS~~~g~~g~~D~~rd~RG 105 (598)
|||++|+|||+||+|||||+|++||||+||+|+|+|++|++++|+|++|+++||+|||++|||+++|+++++|+.+|+||
T Consensus 1 l~d~~l~e~l~~f~reripeR~vHAKG~ga~G~F~vt~d~s~~t~a~~f~~~gk~~pv~vRFSt~~g~~~~~D~~rd~RG 80 (451)
T cd08157 1 LQDFHLIDTLAHFDRERIPERVVHAKGAGAYGEFEVTDDISDITSADMLQGVGKKTPCLVRFSTVGGEKGSADTVRDPRG 80 (451)
T ss_pred CchHHHHHHHHhhccCCCccccccCCcccEEEEEEECCChhHHHhhhhccCCCceeeEEEecccCCCCCCCCCcCCCcCe
Confidence 79999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred eeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHhHHHHhhcCCCCCCCcCC
Q 044386 106 FAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRH 185 (598)
Q Consensus 106 ~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl~~~Pes~~~~~~l~s~rg~P~Sy~~ 185 (598)
|||||++++|+|||||||+||||++||++|++|+++++++|.|+++|++++|+|++.+||++|+++|+++++|+|.||++
T Consensus 81 ~AiKf~t~eg~~DlV~nn~PvFfird~~~F~~~i~a~~~~p~~~~~d~~~~~df~~~~Pes~~~~~~l~s~~g~p~sy~~ 160 (451)
T cd08157 81 FAVKFYTEEGNWDWVFNNTPVFFIRDPIKFPHFIHSQKRDPQTNLKDSTMFWDYLSQNPESIHQVMILFSDRGTPASYRS 160 (451)
T ss_pred EEEEEEcCCCceeeeeecCcccccCCHHHHHHHHHhcccCCCCCCCChHHHHHHHhhChHHHHHHHHHhccCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHHHHHHHcCCCceEEEEEEEeCCCccC
Q 044386 186 MEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHED 265 (598)
Q Consensus 186 ~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL~~~I~~g~~~~w~l~vQl~~~~d~~ 265 (598)
|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.++++.++|||++||+++|++|++|+|+|+||||+++|+.
T Consensus 161 ~~~~g~htf~~vn~~G~~~~vK~~~~P~~G~~~l~-~~ea~~~~~~~~d~l~~dL~~~i~~g~~p~w~l~vQl~~~~d~~ 239 (451)
T cd08157 161 MNGYSGHTYKWVNPDGSFKYVQFHLKSDQGPKFLT-GEEAARLAGSNPDYATKDLFEAIERGDYPSWTVYVQVMTPEQAE 239 (451)
T ss_pred CCccccceeEEECCCCCEEEEEEEEEECCCcccCC-HHHHHhhcCCCCChhHhhHHHHHhcCCCceEEEEEEEeCHHHHh
Confidence 99999999999999999999999999999999999 99999988899999999999999999988999999999999999
Q ss_pred CCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceecCCChhhHhhhhhhHHHhHhhcCCCC
Q 044386 266 QFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNY 345 (598)
Q Consensus 266 ~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~pS~DpilqaR~~aY~dS~~~Rlg~N~ 345 (598)
.++|+|+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|||+++||+||+|||||+|++||++||++|+|+||
T Consensus 240 ~~~f~i~D~Tk~WPe~~~P~~~vG~l~Ln~~~~~~~~e~eq~aF~P~~~vpGi~ps~DpiLq~R~~aY~ds~~~R~g~N~ 319 (451)
T cd08157 240 KLRFNIFDLTKVWPHKDFPLRPVGKLTLNENPKNYFAEIEQAAFSPSHMVPGIEPSADPVLQARLFSYPDAHRHRLGPNY 319 (451)
T ss_pred hCCCCCCcCCcccCcccCccEEeEEEEecCCChhHHhHhhhhcccccccCCCccCCCCchhcccccchHHHHHhccCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC-CCCCCC-CCCCccccc-CCCCCCcccCCCCCCCCC--CCCCCCCCcccccceeeeee-ccCCCcccchhh
Q 044386 346 LMLPVNAPK-CPHRNN-HYDGFMNFM-HRDEEVDYFPSRYDPTRH--AERYPIPSDVITGRREKACI-EKENNFKQPGER 419 (598)
Q Consensus 346 ~qlPvN~P~-~~v~n~-~rDG~m~~~-~~~~~~nY~Pns~~~~~~--~~~~~~~~~~v~G~~~r~~~-~~~dDf~Qar~f 419 (598)
+|||||||+ |+++|+ ||||+|++. ++++.|||.||++.+... ...+..++..++|.+.++.. .++|||+|||+|
T Consensus 320 ~qlPvN~p~~~~~~~~~~rdG~m~~~~~~~~~~nY~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~Q~~~~ 399 (451)
T cd08157 320 QQLPVNRPKTSPVYNPYQRDGPMSVNGNYGGDPNYVSSILPPTYFKKRVDADGHHENWVGEVVAFLTEITDEDFVQPRAL 399 (451)
T ss_pred hhCCCCCCCcCCCCCCcCcCCCCcccCCCCCCCCcCCCCCCCCCcccccccCCCCceeeeeeEeecccccccchhccHHH
Confidence 999999999 899876 999999997 668899999999986432 22345566689999988775 367999999999
Q ss_pred hcC-CCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhcChhhcCchHHHHHHHhC
Q 044386 420 YRS-WAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQISGSEASFSSQCEAKHLK 476 (598)
Q Consensus 420 yr~-ls~~EqerLI~Nia~~L~d~~v~~eIqeR~l~~f~kVDpdlg~~~~~rVA~~L~ 476 (598)
|++ |+++||++||+||+++|+ +|+++||+||+++|++||+||| ++||++|+
T Consensus 400 y~~~~~~~~k~~li~n~~~~l~--~~~~~i~~~~~~~~~~~d~~~g----~~v~~~~~ 451 (451)
T cd08157 400 WEVVGKPGQQERFVKNVAGHLS--GAPPEIRKRVYEIFARVNPDLG----KRIEKATE 451 (451)
T ss_pred HHhhCCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHhCHHHH----HHHHHhhC
Confidence 995 799999999999999999 6899999999999999999999 99999985
No 9
>cd00328 catalase Catalase heme-binding enzyme. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Most catalases exist as tetramers of 65KD subunits containing a protoheme IX group buried deep inside the structure. In eukaryotic cells, catalases are located in peroxisomes.
Probab=100.00 E-value=6e-127 Score=1028.14 Aligned_cols=427 Identities=47% Similarity=0.807 Sum_probs=408.3
Q ss_pred CCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeec
Q 044386 42 RIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLG 121 (598)
Q Consensus 42 ~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~ 121 (598)
|||||++||||+||+|+|++++|++++|+|++|+++|++|||++|||+++|+++++|+.+|+|||||||++++|+|||||
T Consensus 1 riPER~~HAKG~ga~G~F~v~~d~~~~t~a~~f~~~g~~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~~g~~D~v~ 80 (433)
T cd00328 1 RIPERVVHARGAGAFGYFTAYGDWSDISAAAFFSAIGKKTPVFVRFSTVVGGAGSADTVRDPHGFATKFYTEEGNFDLVG 80 (433)
T ss_pred CCCcccccCcccceEEEEEECCChhHHHhhhhccCCCceeeEEEecccCCCCCCCCccCCCCCeeEEEEecCCCceeEee
Confidence 79999999999999999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred cCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCC
Q 044386 122 NSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNG 201 (598)
Q Consensus 122 nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G 201 (598)
||+||||++|+++|++|+|++|++|.|+++|++++|+|++.|||++|+++|++++||+|+||++|+|||+|||+|+|++|
T Consensus 81 nn~PvFf~~d~~~F~~~i~a~k~~P~t~~~d~~~~~~f~~~~Pes~h~~~~~~s~r~~P~sy~~~~~~gvhtf~~vn~~G 160 (433)
T cd00328 81 NNTPIFFIRDAIKFPDFIHAQKPNPQTALPDADRFWDFLSLRPESLHQVSFLFSDRGIPAAYRHMNGYGSHTFKLVNANG 160 (433)
T ss_pred ecCceeecCCHHHhhHhhhccCCCCCCCCCCHHHHHHHHhcCHHHHHHHHHHhcCCCCCCCcccCCccccceEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHHHHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCC
Q 044386 202 KVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPED 281 (598)
Q Consensus 202 ~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~ 281 (598)
+.+||||||+|.+|+++|+ ++||.++++.++|||++||+++|++|++|+|+|+||||+++|+.+++|||+|+||+||++
T Consensus 161 ~~~~vk~~~~p~~G~~~l~-~eea~~~~~~~~d~l~~dL~~~i~~G~~P~w~l~vQv~~~~d~~~~~f~~~D~Tk~WP~~ 239 (433)
T cd00328 161 KVHYVKFHWKTDQGIANLV-WEEAARLAGEDPDYHRQDLFEAIEAGDYPSWELYIQVMTFNDAEKFPFNPLDPTKVWPEE 239 (433)
T ss_pred CEEEEEEEEEeCCCCCCCC-HHHHHHhhcCCCchhhhhHHHHHhCCCCceEEEEEEEcCHHHHhcCCCCCCcCCcccCCc
Confidence 9999999999999999999 999999989999999999999999999999999999999999999999999999999999
Q ss_pred CcCcEeeEEEEeCCCCCchhhhccccceecccCCCceecCCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCCCCCCC
Q 044386 282 IIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNH 361 (598)
Q Consensus 282 ~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~pS~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~v~n~~ 361 (598)
++|+++||+|+||++++|+|++|||++|+|+++||||++|+|||||+|++||+|||++|+|+||+|||||||+|+++|||
T Consensus 240 ~~p~i~vG~l~Ln~n~~n~f~e~eq~aF~P~~lvpGI~~S~DplLq~R~faY~ds~~~R~g~N~~qlpvN~p~~~~~n~~ 319 (433)
T cd00328 240 LVPLIVVGKLVLNRNPLNFFAEVEQAAFDPGHIVPGVEFSEDPLLQGRLFSYADTQLYRLGPNFQQLPVNRPYAPVHNNQ 319 (433)
T ss_pred CcccEEeEEEEeecCCcchhhhhhhhccCCcCCCCCccCCCCcccccccccchhhhhcCCCCCHhhCcccCCCCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCCCC----CCcccccceeeeee-ccCCCcccchhhhcCCCHHHHHHHHHHHH
Q 044386 362 YDGFMNFMHRDEEVDYFPSRYDPTRHAERYPI----PSDVITGRREKACI-EKENNFKQPGERYRSWAPDRQERFLNRWI 436 (598)
Q Consensus 362 rDG~m~~~~~~~~~nY~Pns~~~~~~~~~~~~----~~~~v~G~~~r~~~-~~~dDf~Qar~fyr~ls~~EqerLI~Nia 436 (598)
|||+|++.++.+.|||+|||+++......... ++..+.|.+.++.. .++|||+|||+||++|+++||+|||+||+
T Consensus 320 rdG~m~~~~~~~~~nY~pns~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~Q~~~~~~~~~~~ek~~lv~n~~ 399 (433)
T cd00328 320 RDGAGNMNDNTGVPNYEPNAKDVRYPAQGAPKFDRGHFSHWKSGVNREASTTNDDNFTQARLFYRSLTPGQQKRLVDAFR 399 (433)
T ss_pred cCCCccccCCCCCCCccCCCCCCCCCCcccccccCCCceeeecceEEecccCCcchhhhhHHHHhcCCHHHHHHHHHHHH
Confidence 99999998666699999999988655433322 34467787777664 46799999999999999999999999999
Q ss_pred HHcCCCCC-CHHHHHHHHHHHHhcChhhcCchHHHHHHHh
Q 044386 437 KALCDPRV-THEVRSIWVSYWSQISGSEASFSSQCEAKHL 475 (598)
Q Consensus 437 ~~L~d~~v-~~eIqeR~l~~f~kVDpdlg~~~~~rVA~~L 475 (598)
++|+ .| +++||+||+++|++||++|| ++||++|
T Consensus 400 ~~l~--~v~~~~i~~r~~~~f~~~d~~~g----~~va~~~ 433 (433)
T cd00328 400 FELA--DAVSPQIQQRVLDQFAKVDAAAA----KRVAKAL 433 (433)
T ss_pred HHHh--CCCCHHHHHHHHHHHHHhCHHHH----HHHHhhC
Confidence 9999 67 88999999999999999999 9999975
No 10
>PF00199 Catalase: Catalase; InterPro: IPR011614 Catalases (1.11.1.6 from EC) are antioxidant enzymes that catalyse the conversion of hydrogen peroxide to water and molecular oxygen, serving to protect cells from its toxic effects []. Hydrogen peroxide is produced as a consequence of oxidative cellular metabolism and can be converted to the highly reactive hydroxyl radical via transition metals, this radical being able to damage a wide variety of molecules within a cell, leading to oxidative stress and cell death. Catalases act to neutralise hydrogen peroxide toxicity, and are produced by all aerobic organisms ranging from bacteria to man. Most catalases are mono-functional, haem-containing enzymes, although there are also bifunctional haem-containing peroxidase/catalases (IPR000763 from INTERPRO) that are closely related to plant peroxidases, and non-haem, manganese-containing catalases (IPR007760 from INTERPRO) that are found in bacteria []. Based on a phylogenetic analysis, catalases can be classified into clade 1, 2 and 3. Clade 1 contains small subunit catalases from plants and a subset of bacteria; clade 2 contains large subunit catalases from fungi and a second subset of bacteria; and clade 3 contains small subunit catalases from bacteria, fungi, protists, animals, and plants [, ]. This entry represent the core-forming domain of mono-functional, haem-containing catalases. It does not cover the region that carries an immune-responsive amphipathic octa-peptide that is found in the C-terminal of some catalases (IPR010582 from INTERPRO).; GO: 0004096 catalase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 7CAT_A 3NWL_D 4BLC_D 1TH3_D 1TH4_A 1TGU_B 1TH2_D 3RGS_D 3RE8_D 3RGP_C ....
Probab=100.00 E-value=1.6e-109 Score=889.55 Aligned_cols=383 Identities=50% Similarity=0.826 Sum_probs=339.2
Q ss_pred CCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCcee
Q 044386 2 TTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQT 81 (598)
Q Consensus 2 t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~t 81 (598)
||++|+||.++++|+|+|++||++|||.+|+|+|++|+++++++|++||||+||+|+|++++++++++++++|+++||+|
T Consensus 1 t~~~g~~~~~~~~~~~~g~~gp~~~~~~~lvd~l~~~~~~~~~~R~~HAKG~~a~G~F~v~~~~~~~~~a~~F~~~Gk~~ 80 (384)
T PF00199_consen 1 TTSNGAPVANPENSQTVGSRGPLLLQDEQLVDKLEHFDGERPGERAVHAKGHGAKGEFEVTPDLPELTRAGLFAKPGKTY 80 (384)
T ss_dssp B-TTSSBBSSSSSEEEESTTSEBBTTHHHHHHHHHHHTT--TCS-SSS-SEEEEEEEEEESSCGTTT---GGGSSTT-EE
T ss_pred CCCCCcccCCCccceecCCCCCceeccHHHHHHhhccccccCccccccccceEEEEEEEECCcchHhhhcccccCCCccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHHH
Q 044386 82 PVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCS 161 (598)
Q Consensus 82 Pv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl~ 161 (598)
||++|||+++|+++++|+.+|+|||||||+++||+|||||+|+||||++|+++|++|+++++++|.++++++.++|+|++
T Consensus 81 pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~eG~~D~v~~n~PvF~~~d~~~F~~~~~a~~~~p~~~~~~~~~~~~~~~ 160 (384)
T PF00199_consen 81 PVIVRFSNAGGNPGSPDTARDPRGMAIKFFTDEGNWDFVMNNTPVFFARDPEKFLDFLKALKPDPATGLPDPNRLWAFLA 160 (384)
T ss_dssp EEEEEEEESSS-TTS-TTSSSBEEEEEEEEETTEEEEEEEESSSS-S-SSGGGHHHHHHHHSBBTTTTSBCHHHHHHHHH
T ss_pred ceeeeecccCCCCCCCccCCCcceeEeEEecccccceeeeccccceeccCchhccchhhhhcccccccccChHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHHH
Q 044386 162 HLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLY 241 (598)
Q Consensus 162 ~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL~ 241 (598)
.|||++|+++++.+++++|.||++++|||+|||+|+|++|+.+||||+|+|.+|++.++ .+|+.++.+.++|||++||+
T Consensus 161 ~~pe~~~~~~~~~~~~~~p~s~~~~~y~s~~tf~~~~~~G~~~~vK~~~~P~~g~~~l~-~~ea~~~~~~~pdyL~~dL~ 239 (384)
T PF00199_consen 161 AHPEALHQVAWLFSDRPTPASYAHMNYYSIHTFKFTNADGERRYVKYRLVPEQGVKPLT-DEEAAKIAGRDPDYLRDDLY 239 (384)
T ss_dssp HSGGGHHHHHHHHSGGGSBSSGGGS-EEEESEEEEEETTSEEEEEEEEEEETTBTTBE--HHHHHHHHHH-TTHHHHHHH
T ss_pred cChhhhhhhhhhhccCCCCCCccCCCcEeeeeEEeccccCcccEEEEEecCCCCcccCC-HHHhhhcccCCcchhhHHHH
Confidence 99999999999999899999999999999999999999999999999999999999999 99998877788999999999
Q ss_pred HHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceecC
Q 044386 242 DSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYS 321 (598)
Q Consensus 242 ~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~pS 321 (598)
++|+++..++|+|+|||++++|.++++|||+|+||+|||+++|+++||+|+|++++++++++||+|+|||||+++||+||
T Consensus 240 ~rL~~~~~~~~~l~vQl~~~~d~~~~~~~i~D~T~~Wpe~~~P~~~vg~L~l~~~~~~~~~~~e~l~F~P~~~~~Gi~~s 319 (384)
T PF00199_consen 240 ERLAAGGPVRWDLQVQLATPEDPMPFRFNIEDATKEWPEDRSPLIPVGTLTLNRNPPDFFAECEQLAFNPWHLPPGIEPS 319 (384)
T ss_dssp HHHHTTS-EEEEEEEEEEEGGGCTTSSSHTT-TTS--TTTTSEEEEEEEEEEEEE-SSHHHHTTT----TT--BTTEEE-
T ss_pred HHHhcCCceeEEEEEEecCcccccccCCCcccCCccCCCcCceeeeeeeEeecccccchhhhhhhhhccccccccceecC
Confidence 99994444899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccCCCCCCC
Q 044386 322 NDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPT 385 (598)
Q Consensus 322 ~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~~ 385 (598)
+|||||+|++||++|+++|+|+||+|||||||+|+++|++|||+|++.++++.|||+|||++++
T Consensus 320 ~Dpil~aR~~aY~~s~~~R~~~n~~~lp~n~p~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~ 383 (384)
T PF00199_consen 320 DDPILQARSFAYADSQRRRLGANYQQLPVNEPKCPVHNNQRDGAMRFGNQGSAPNYFPSSFGGP 383 (384)
T ss_dssp S-HHHHHHHHHHHHHHHHHTSTTGGGSGGGS-SSS-BSST---TT-TTTTTTS-SSSSCSSTTS
T ss_pred CCcchhcchhhhhhhhhccCCcccccCCCCCCCCCcCCCCCCCCCccCCCCCCCCcCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999864
No 11
>cd08153 srpA_like Catalase-like heme-binding proteins similar to the uncharacterized srpA. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes involved in the protection of cells from the toxic effects of peroxides. It catalyses the conversion of hydrogen peroxide to water and molecular oxygen. Several other related protein families share the catalase fold and bind to heme, but do not necessarily have catalase activity. This family contains uncharacterized proteins similar to the Synechococcus elongatus PCC 7942 periplasmic protein srpA, of mostly bacterial origin. The plasmid-encoded srpA is regulated by sulfate, but does not seem to function in its uptake or metabolism.
Probab=100.00 E-value=3.1e-72 Score=582.50 Aligned_cols=293 Identities=29% Similarity=0.453 Sum_probs=272.5
Q ss_pred HHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEEe
Q 044386 33 EKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYT 112 (598)
Q Consensus 33 e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~ 112 (598)
+.|..-.+.+.+.|++||||+||+|+|+|++++++++++++|+ |++|||++||||++|+++++|+.+|+|||||||++
T Consensus 2 ~~~~~~~g~~~~~R~~HaKG~~~~G~f~v~~~~~~~~~~~~f~--~~~~pv~vRfS~~~g~p~~~D~~~d~rG~AiK~~l 79 (295)
T cd08153 2 DALEALFGKHPGFRRNHAKGICVSGTFTPSGAAASLSRAPLFS--GGSVPVTGRFSLGGGNPKAPDDAANPRGMALKFRL 79 (295)
T ss_pred chhhhhcCCCCccccccCceeeEEEEEEECCCcchhhhccccC--CCceEEEEEeccCCCCCCCCCCCCCCCeEEEEEEc
Confidence 4455556667799999999999999999999999999999997 67899999999999999999999999999999998
Q ss_pred ccC-ceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHhHHHHhhcCCCCCCCcCCCCCccc
Q 044386 113 REG-NWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGV 191 (598)
Q Consensus 113 ~eG-n~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~ 191 (598)
++| +|||||+|+||||++|+++|++|+++++++ .++.+++.++++|++.||++.+++.++.+. +.|.||++++|||+
T Consensus 80 ~d~~~~D~v~~n~pvF~~~~~~~f~~~~~a~~~~-~~~~~~~~~~~~f~~~~P~~~~~~~~~~~~-~~p~s~~~~~y~s~ 157 (295)
T cd08153 80 PDGEQWRMVMNSFPVFPVRTPEEFLALLKAIAPD-ATGKPDPAKLKAFLAAHPEAAAFLAWIKTA-PPPASFANTTYYGV 157 (295)
T ss_pred CCCCeEeEeEecCcccccCCHHHHHHHHHhhCcC-cCCCCCHHHHHHHHhhCHHHHHHHHHHcCC-CCCCCcccCCccce
Confidence 888 799999999999999999999999999988 678889999999999999999999987554 79999999999999
Q ss_pred cceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHHHHHHHcCCCceEEEEEEEeCCCccCCCCCCC
Q 044386 192 QTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDP 271 (598)
Q Consensus 192 htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di 271 (598)
|||+|+|++|+.++|||+|+|..|++.|+ .+++.. .++|||++||.++|++|+ ++|+|+|||++++|. |
T Consensus 158 ~~f~f~~~~G~~~~vk~~~~P~~g~~~l~-~~~~~~---~~~d~l~~~l~~~l~~g~-~~f~l~vQl~~~~d~------i 226 (295)
T cd08153 158 NAFYFTNANGKRQPVRWRFVPEDGVKYLS-DEEAAK---LGPDFLFDELAQRLAQGP-VRWDLVLQLAEPGDP------T 226 (295)
T ss_pred eeEEEECCCCCEEEEEEEEEECCCCCCCC-HHHhcc---CCcchhHHHHHHHHHhCC-ceEEEEEEEcCCCCc------C
Confidence 99999999999999999999999999998 777543 568999999999999999 799999999998883 7
Q ss_pred CCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceecCCChhhHhhhhhhHHHhHhhc
Q 044386 272 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL 341 (598)
Q Consensus 272 ~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~pS~DpilqaR~~aY~dS~~~Rl 341 (598)
+|+||+|||+ +|+++||+|+|++++++.+++||+++|+|||+++||++|.|||||+|+++|++|+++|.
T Consensus 227 ~D~t~~Wpe~-~p~~~vg~l~l~~~~~~~~~~~e~l~F~P~~~~~gi~~~~Dpi~~~R~~aY~~s~~~R~ 295 (295)
T cd08153 227 DDPTKPWPAD-RKEVDAGTLTITKVAPDQGGACRDINFDPLVLPDGIEPSDDPLLAARSAAYAVSFSRRQ 295 (295)
T ss_pred CCCCccCCCC-CceeEEEEEEECCCCccchhhhhheeeCCccCCCCCCCCCChHHhhhhhHHHHHHhhcC
Confidence 8999999999 79999999999999666668899999999999999999999999999999999999995
No 12
>cd08150 catalase_like Catalase-like heme-binding proteins and protein domains. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes involved in the protection of cells from the toxic effects of peroxides. It catalyses the conversion of hydrogen peroxide to water and molecular oxygen. Several other related protein families share the catalase fold and bind to heme, but do not necessarily have catalase activity.
Probab=100.00 E-value=1.5e-67 Score=544.37 Aligned_cols=279 Identities=27% Similarity=0.380 Sum_probs=261.4
Q ss_pred CcccCCCCceeeEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEEec--cCceeeec
Q 044386 44 PERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTR--EGNWDLLG 121 (598)
Q Consensus 44 ~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~--eGn~DlV~ 121 (598)
++|.+||||.||+|+|+|++++++++++++|+ +|++|||++||||++| .+|+.+|+|||||||+++ +++|||||
T Consensus 1 g~R~~Hakg~~a~G~F~v~~~~~~~~~~~~f~-~~~~~pv~~RfS~~~g---~~D~~~~~RG~AiKf~~~~~~~~~D~v~ 76 (283)
T cd08150 1 GLRGQHFQGTCAFGTFEVLADLKERLRVGLFA-EGKVYPAYIRFSNGAG---IDDTKPDIRGFAIKFTGVADAGTLDFVL 76 (283)
T ss_pred CcCcccCCeeeEEEEEEEcCCcchhhhccccc-CCCeeEEEEEeCCCCC---CcccCCCCceEEEEEEecCCCceEeEEE
Confidence 58999999999999999999999999999998 6889999999999976 789999999999999999 56899999
Q ss_pred cCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCC
Q 044386 122 NSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNG 201 (598)
Q Consensus 122 nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G 201 (598)
+|+||||++|+++|.+++++..+.+ +++++++++++|+..||++++++.++++ +.|.||++++|||+|||+|+|++|
T Consensus 77 ~n~pvF~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~p~s~~~~~y~s~~~f~f~~~~g 153 (283)
T cd08150 77 NNTPVFFIRNTSDYEDFVAEFARSA-RGEPPLDFIAWYVEKRPEDLPNLLGARS--QVPDSYAAARYFSQVTFAFINGAG 153 (283)
T ss_pred eCCCcCccCCHHHHHHHHHhccCCc-cCCCChHHHHHHHHhChhHHHHHHHHhC--CCCCCccccceEeeeeEEEeccCC
Confidence 9999999999999999998887765 6789999999999999999999998876 789999999999999999999999
Q ss_pred CEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHHHHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCC
Q 044386 202 KVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPED 281 (598)
Q Consensus 202 ~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~ 281 (598)
+.++|||+++|.+|.+.++ ++++ ...++|||+++|.++|++|+ ++|+|+|||++++|.++ |+|+||+|||+
T Consensus 154 k~~~vr~~~~P~~g~~~l~-~~~~---~~~~~d~L~~~l~~rl~~~~-~~~~l~vQl~~~~d~~~----i~D~t~~Wpe~ 224 (283)
T cd08150 154 KYRVVRSKDNPVDGIPSLE-DHEL---EARPPDYLREELTERLQRGP-VVYDFRIQLNDDTDATT----IDNPTILWPTE 224 (283)
T ss_pred EEEEEEEEecccCCCcccc-hhhh---cCCCcCHHHHHHHHHHHhCC-ceEEEEEEEccccccCC----CCCCCcCCCCC
Confidence 9999999999999999998 6553 34678999999999999998 79999999999999864 99999999999
Q ss_pred CcCcEeeEEEEeCCCCCchhhhccccceecccCCCceecCCC--hhhHhhhhhhHHHhHhhc
Q 044386 282 IIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSND--KMLQCRIFAYGDTQRHRL 341 (598)
Q Consensus 282 ~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~pS~D--pilqaR~~aY~dS~~~Rl 341 (598)
+|+++||||+|++++.+ ++||+++|||.++++||++|+| ||||+|+++|.+|+++|+
T Consensus 225 -~p~~~vg~l~i~~~~~~--~~~~~~~f~p~~~~~gi~~~~d~g~i~~~R~~~Y~~S~~~R~ 283 (283)
T cd08150 225 -HPVEAVAKITIPPPTFT--AAQEAFAFNPFTPWHGLLETNDLGPILEVRRRVYTSSQGLRH 283 (283)
T ss_pred -CCceEEEEEEECCCCCc--HHHHHHhcCCCCCCCccCCCCCchHHHHHHHHHHHHHHHhhC
Confidence 99999999999998777 7899999999999999999999 999999999999999996
No 13
>cd08151 AOS Allene oxide synthase. Allene oxide synthase converts a fatty acid hydroperoxide to an allene oxide, which is an unstable epoxide. In corals, the enzyme is part of a eiconaosid synthesis pathway that is initiated by a lipoxygenase, which generates the fatty acid hydroperoxides in the first step. The structure of allene oxide synthase closely resembles that of catalase, but allene oxide synthase does not have catalase activity.
Probab=100.00 E-value=6.6e-67 Score=549.89 Aligned_cols=289 Identities=23% Similarity=0.311 Sum_probs=253.8
Q ss_pred HHHHhh---ccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCcee
Q 044386 31 LVEKLA---HFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFA 107 (598)
Q Consensus 31 l~e~l~---~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~tPv~vRFS~~~g~~g~~D~~rd~RG~A 107 (598)
++.+|+ .......+.|++||||+||+|+|+|++|++ ++++++|+ +|++|||++||||++|+ ++|+.+|+||||
T Consensus 10 ~~~~~~~~f~~~~~~~g~R~~HaKG~ga~G~F~v~~d~~-~~~a~~F~-~g~~~pv~~RfS~~~g~--~~D~~~d~RG~A 85 (328)
T cd08151 10 IELNLATMFAAATLKTGRRGTHTIGVGAKGVLTVLAESD-FPEHAFFT-AGKRFPVILRHANIVGG--DDDASLDGRGAA 85 (328)
T ss_pred HHHHHHHHHhhccCCCCcccccCceeeEEEEEEEcCCch-hhhhhhcC-CCCeEEEEEEecCCCCC--ccccccCCCeEE
Confidence 344444 333455689999999999999999999999 99999997 68899999999999887 889999999999
Q ss_pred EEEEec----cCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHhHHHHhhcCCCCCCCc
Q 044386 108 VKFYTR----EGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDY 183 (598)
Q Consensus 108 IKf~~~----eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl~~~Pes~~~~~~l~s~rg~P~Sy 183 (598)
|||+++ +|+|||||||+||||++|+++|++|+++..+ .....|...||++... ++.+.+++|.||
T Consensus 86 iKf~~~~~~~~~~~D~v~~n~pvF~~~d~~~F~~~~~a~~p---------~~~~~~~~~~p~~~~~--~~~~~~~~p~s~ 154 (328)
T cd08151 86 LRFLNAGDDDAGPLDLVMNTGESFGFWTAASFADFAGAGLP---------FREKAAKLRGPLARYA--VWASLRRAPDSY 154 (328)
T ss_pred EEEeccCCCCCCceeEEEecCCccccCCHHHHHHHHhcCCC---------cchhhhhhcCHHHHhh--hhhcccCCCCCc
Confidence 999999 6789999999999999999999999998532 2344555578877643 334678899999
Q ss_pred CCCCCccccceEeEecCCCEEEEEEEEEeC-CCCCcCCCHHHHHH--------------hcCCCCchhHHHHHHHHHcCC
Q 044386 184 RHMEGFGVQTFTLVNKNGKVHYVKFHWKPT-CGVKCLIDDEEAVK--------------VGGSNHSHATQDLYDSIAAGN 248 (598)
Q Consensus 184 ~~~~y~s~htf~~~n~~G~~~~VK~~~~P~-~G~~~l~~~~ea~~--------------l~~~d~dyl~~dL~~~I~~g~ 248 (598)
++++|||+|||+|+|++|+.+||||+|+|. +|++.+. .+++.+ ....++|||++||+++|++|+
T Consensus 155 ~~~~y~s~~~f~f~~~~G~~~~vK~~~~P~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~L~~dl~~rl~~g~ 233 (328)
T cd08151 155 TDLHYYSQICYEFVALDGKSRYARFRLLPPDADTEWDL-GEDVLETIFQRPRLYLPRLPGDTRPKDYLRNEFRQRLQSPG 233 (328)
T ss_pred ccccceeEeeEEEECCCCCEEEEEEEEEECCCCccccc-hhhhhhcccccccccchhhcccCCCccHHHHHHHHHHHhCC
Confidence 999999999999999999999999999994 6778887 666542 123478999999999999997
Q ss_pred CceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCC--ceecCCCh--
Q 044386 249 YPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVP--GIYYSNDK-- 324 (598)
Q Consensus 249 ~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvp--Gi~pS~Dp-- 324 (598)
++|+|+|||++++|.. +++|+|+||+|||+++|+++||+|+|++++++ ++||+++|||||+++ ||++|.||
T Consensus 234 -~~~~l~iQl~~~~d~~--~~~i~D~T~~Wpe~~~P~i~vg~l~l~~~~~~--~~~e~l~F~P~~~~~~~gi~~~~~~~d 308 (328)
T cd08151 234 -VRYRLQIQLREVSDDA--TAVALDCCRPWDEDEHPWLDLAVVRLGAPLPN--DELEKLAFNPGNTPESLGLPLAYCADD 308 (328)
T ss_pred -ceEEEEEEEechhhcC--CCCCCCCCccCCcccCceEEEEEEEECCCCCh--hhhHhhcccccccCCCCCccCCCChHH
Confidence 7999999999998865 56799999999999999999999999999874 689999999999999 99999999
Q ss_pred ---hhHhhhhhhHHHhHhh
Q 044386 325 ---MLQCRIFAYGDTQRHR 340 (598)
Q Consensus 325 ---ilqaR~~aY~dS~~~R 340 (598)
|+++|+.+|+.|+++|
T Consensus 309 ~gsi~~~R~~vY~~s~~~R 327 (328)
T cd08151 309 YASLGHLRSLVYEISQRLR 327 (328)
T ss_pred hhhHHHHHHHHHHHHHhhc
Confidence 9999999999999998
No 14
>cd08152 y4iL_like Catalase-like heme-binding proteins similar to the uncharacterized y4iL. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes involved in the protection of cells from the toxic effects of peroxides. It catalyses the conversion of hydrogen peroxide to water and molecular oxygen. Several other related protein families share the catalase fold and bind to heme, but do not necessarily have catalase activity. This family contains uncharacterized proteins similar to Rhizobium sp. NGR234 y4iL, of mostly bacterial origin.
Probab=100.00 E-value=4.8e-64 Score=523.51 Aligned_cols=280 Identities=20% Similarity=0.215 Sum_probs=248.8
Q ss_pred CCcccCCCCce-eeEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccC------
Q 044386 43 IPERVVHARGA-SAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREG------ 115 (598)
Q Consensus 43 ~~eR~vHAKG~-ga~G~F~v~~d~~~~t~a~lF~~~Gk~tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eG------ 115 (598)
.+.|++||||+ |++|+|+|++++++++++++|++ |++|||+|||||++|. +.+|..+|+|||||||++++|
T Consensus 2 ~~~R~~HaKg~G~v~G~F~v~~~~~~~~~~~~F~~-~~~~pv~vRfS~~~~~-~~~D~~~~~RG~AiK~~~~~G~~l~~~ 79 (305)
T cd08152 2 HALRDAHAKSHGCLKAEFTVLDDLPPELAQGLFAE-PGTYPAVIRFSNAPGD-ILDDSVPDPRGMAIKVLGVPGEKLLPE 79 (305)
T ss_pred CccccccCcccccceEEEEECCCchHHHhhhhcCC-CCeEEEEEEecCCCCC-CCCcccCCCCeEEEEEEcCcccccccc
Confidence 46899999999 68999999999999999999985 7899999999999998 789999999999999999866
Q ss_pred ----ceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHHHh-CchhHhHHHHhhcC-------CCCCCCc
Q 044386 116 ----NWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSH-LPESLSTFSWFFDD-------VGIPQDY 183 (598)
Q Consensus 116 ----n~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl~~-~Pes~~~~~~l~s~-------rg~P~Sy 183 (598)
+|||||+|+||||++|+++|++|++++++. ++. +.+.+.|+.. +|+....+.++... ...|.||
T Consensus 80 ~~~~~~D~v~~n~pvF~~~d~~~f~~~~~a~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~ 155 (305)
T cd08152 80 EDATTQDFVLVNHPVFFARDAKDYLALLKLLART--TSL--PDGAKAALSAPLRGALRVLEAAGGESPTLKLGGHPPAHP 155 (305)
T ss_pred cCCcccceeeecCceeecCCHHHHHHHHHHHHhh--cCC--chHHHHHHHHHHHHHHHHHHhhcccccccccccCCCCCc
Confidence 799999999999999999999999999854 443 4667778876 88777766665332 3568999
Q ss_pred CCCCCccccceEeEecCCCEEEEEEEEEeCCCCCc-CCCHHHHHHhcCCCCchhHHHHHHHHHcCCCceEEEEEEEeCCC
Q 044386 184 RHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKC-LIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPD 262 (598)
Q Consensus 184 ~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~-l~~~~ea~~l~~~d~dyl~~dL~~~I~~g~~~~w~l~vQl~~~~ 262 (598)
++++|||+|+|+|+|. +|||+++|.+|... ++ .+++. .+.++|||+++|.++|++|+ ++|+|+||+++++
T Consensus 156 ~~~~y~s~~~fr~g~~-----~vk~~~~P~~~~~~~l~-~~~~~--~~~~~d~L~~~L~~~l~~g~-~~f~l~vQl~~~~ 226 (305)
T cd08152 156 LGETYWSQAPYRFGDY-----VAKYSVVPASPALPALT-GKELD--LTDDPDALREALADFLAEND-AEFEFRIQLCTDL 226 (305)
T ss_pred cccceecccceeEcce-----eEEEEEEECCCccccCc-hhhhh--cCCCccHHHHHHHHHHHhCC-ceEEEEEEecCch
Confidence 9999999999999873 99999999998766 55 54431 35688999999999999999 7999999999999
Q ss_pred ccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCC----chhhhccccceecccCCCceecCCChhhHhhhhhhHHHhH
Q 044386 263 HEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNID----NFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQR 338 (598)
Q Consensus 263 d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~----n~f~e~EqlaF~P~~lvpGi~pS~DpilqaR~~aY~dS~~ 338 (598)
|.++ |+|+||+|||+++|+++||+|+|+++.. +..+.||+++|||||+++||+|+ |+|+++|+.+|..|++
T Consensus 227 d~~p----i~D~tv~W~e~~~p~i~vg~l~i~~~~~~~~~~~~~~~~~l~F~P~~~~~g~~p~-g~i~r~R~~vY~~S~~ 301 (305)
T cd08152 227 EKMP----IEDASVEWPEALSPFVPVATITIPPQDFDSPARQRAFDDNLSFNPWHGLAEHRPL-GSINRARKAVYEASSA 301 (305)
T ss_pred hhCC----CCcCCccCCCccCCCeEEEEEEECCCCccCHHHHhhhhhccccCccccccccCcC-hHHHHHHHHHHHHHHH
Confidence 9876 8899999999999999999999999976 55668999999999999999999 9999999999999999
Q ss_pred hhcC
Q 044386 339 HRLG 342 (598)
Q Consensus 339 ~Rlg 342 (598)
+|+.
T Consensus 302 ~R~~ 305 (305)
T cd08152 302 FRHE 305 (305)
T ss_pred HhcC
Confidence 9974
No 15
>PF06628 Catalase-rel: Catalase-related immune-responsive; InterPro: IPR010582 Catalases (1.11.1.6 from EC) are antioxidant enzymes that catalyse the conversion of hydrogen peroxide to water and molecular oxygen, serving to protect cells from its toxic effects []. Hydrogen peroxide is produced as a consequence of oxidative cellular metabolism and can be converted to the highly reactive hydroxyl radical via transition metals, this radical being able to damage a wide variety of molecules within a cell, leading to oxidative stress and cell death. Catalases act to neutralise hydrogen peroxide toxicity, and are produced by all aerobic organisms ranging from bacteria to man. Most catalases are mono-functional, haem-containing enzymes, although there are also bifunctional haem-containing peroxidase/catalases (IPR000763 from INTERPRO) that are closely related to plant peroxidases, and non-haem, manganese-containing catalases (IPR007760 from INTERPRO) that are found in bacteria []. This entry represents a small conserved region within catalase enzymes that carries the immune-responsive amphipathic octa-peptide that is recognised by T cells [].; PDB: 2CAH_A 1NM0_A 1H7K_A 1E93_A 1H6N_A 3HB6_A 2CAG_A 1M85_A 1MQF_A 1A4E_C ....
Probab=99.76 E-value=4.3e-19 Score=146.66 Aligned_cols=66 Identities=23% Similarity=0.365 Sum_probs=60.4
Q ss_pred eeeccCCCcccchhhhcCCCHHHHHHHHHHHHHHcCCCCCCHH-HHHHHHHHHHhcChhhcCchHHHHHHHhC
Q 044386 405 ACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHE-VRSIWVSYWSQISGSEASFSSQCEAKHLK 476 (598)
Q Consensus 405 ~~~~~~dDf~Qar~fyr~ls~~EqerLI~Nia~~L~d~~v~~e-IqeR~l~~f~kVDpdlg~~~~~rVA~~L~ 476 (598)
+.+.++|||+|||+||++|+++||++||+||+++|+ .|+++ ||+|++++|++||+||| ++|+++||
T Consensus 2 ~~~~~~ddf~Qa~~ly~~l~~~er~~lv~nia~~l~--~v~~~~i~~r~l~~f~~vd~~lg----~~v~~~lg 68 (68)
T PF06628_consen 2 YRSEKDDDFSQARDLYRVLSDEERERLVENIAGHLS--GVSDEEIQERVLAYFYKVDPDLG----QRVAEALG 68 (68)
T ss_dssp HGHGGGCSSHHHHHHHHHSSHHHHHHHHHHHHHHHT--TSSHHHHHHHHHHHHHHH-HHHH----HHHHHHHT
T ss_pred CCCCCCcchhhHHHHHHHCCHHHHHHHHHHHHHHHc--cCChhhHHHHHHHHHHHhCHHHH----HHHHHHcC
Confidence 344567999999999999999999999999999999 78877 99999999999999999 99999997
No 16
>PF11304 DUF3106: Protein of unknown function (DUF3106); InterPro: IPR021455 Some members in this family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently no function is known.
Probab=62.48 E-value=20 Score=32.36 Aligned_cols=12 Identities=33% Similarity=0.473 Sum_probs=7.2
Q ss_pred hhhhhhhhhhhc
Q 044386 482 EHWMLLTCQERE 493 (598)
Q Consensus 482 ~~~~~~~~~er~ 493 (598)
+..+.|+.+||+
T Consensus 90 ~~yq~l~~eeR~ 101 (107)
T PF11304_consen 90 EAYQQLPPEERQ 101 (107)
T ss_pred HHHHcCCHHHHH
Confidence 344666666665
No 17
>PF11304 DUF3106: Protein of unknown function (DUF3106); InterPro: IPR021455 Some members in this family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently no function is known.
Probab=43.39 E-value=72 Score=28.83 Aligned_cols=14 Identities=36% Similarity=0.658 Sum_probs=5.3
Q ss_pred CCCHHHHHHHHHHH
Q 044386 422 SWAPDRQERFLNRW 435 (598)
Q Consensus 422 ~ls~~EqerLI~Ni 435 (598)
.|+++||+++...+
T Consensus 40 ~mspeqq~r~~~rm 53 (107)
T PF11304_consen 40 SMSPEQQQRLRERM 53 (107)
T ss_pred cCCHHHHHHHHHHH
Confidence 33333333333333
No 18
>TIGR03784 marine_sortase sortase, marine proteobacterial type. Members of this protein family are sortase enzymes, cysteine transpeptidases involved in protein sorting activities. Members of this family tend to be found in proteobacteria, rather than in Gram-positive bacteria where sortases attach proteins to the Gram-positive cell wall or participate in pilin cross-linking. Many species with this sortase appear to contain a signal target sequence, a protein with a Vault protein inter-alpha-trypsin domain (pfam08487) and a von Willebrand factor type A domain (pfam00092), encoded by an adjacent gene. These sortases are designated subfamily 6 according to Comfort and Clubb (2004).
Probab=32.71 E-value=32 Score=33.78 Aligned_cols=45 Identities=27% Similarity=0.289 Sum_probs=30.4
Q ss_pred CccccCCCCcCcEeeEEEEeCCCCCch----hhhccccceecccCCCceec
Q 044386 274 VTKWWPEDIIPLQPVGRLVLNKNIDNF----FAENEMLAFNPGIVVPGIYY 320 (598)
Q Consensus 274 ~Tk~Wpe~~~P~i~VG~L~L~~~~~n~----f~e~EqlaF~P~~lvpGi~p 320 (598)
++|+||-.+. .+||+|+|++.-.+. -...+.|+|.|+|....-.|
T Consensus 39 ~~kpw~wadt--~pva~L~IP~lg~~~~V~~G~s~~~L~~G~G~~~~t~~P 87 (174)
T TIGR03784 39 EHKPWPWADT--YPVAKLSAPRLGASLYVLAGASGRNLAFGPGHMLATAQP 87 (174)
T ss_pred CCCCCccccC--ceeEEEEEccCCCceeEEecCCHHHHhheeEEecCCCCC
Confidence 5689998875 489999999864331 12346688888876544333
No 19
>PF14174 YycC: YycC-like protein
Probab=31.82 E-value=32 Score=27.21 Aligned_cols=24 Identities=42% Similarity=0.385 Sum_probs=19.7
Q ss_pred hcChhhcCchHHHHHHHhCCCcchhhhhhh
Q 044386 458 QISGSEASFSSQCEAKHLKVSLELEHWMLL 487 (598)
Q Consensus 458 kVDpdlg~~~~~rVA~~L~~~~~~~~~~~~ 487 (598)
+|++|-+ ..+|+.||+++ ||+|-|
T Consensus 5 qIS~eTA----~kLs~~L~vPl--E~lMHm 28 (53)
T PF14174_consen 5 QISPETA----VKLSKKLGVPL--EQLMHM 28 (53)
T ss_pred ccCHHHH----HHHHHHHCCcH--HHHhcC
Confidence 6889999 99999999987 455544
No 20
>TIGR03092 SASP_sspI small, acid-soluble spore protein I. This protein family is restricted to a subset of endospore-forming bacteria such as Bacillus subtilis, all of which are in the Firmicutes (low-GC Gram-positive) lineage. It is a minor SASP (small, acid-soluble spore protein) designated SspI. The gene in Bacillus subtilis previously was designated ysfA.
Probab=28.92 E-value=54 Score=27.34 Aligned_cols=23 Identities=4% Similarity=0.141 Sum_probs=20.1
Q ss_pred hhhcCCCHHHHHHHHHHHHHHcC
Q 044386 418 ERYRSWAPDRQERFLNRWIKALC 440 (598)
Q Consensus 418 ~fyr~ls~~EqerLI~Nia~~L~ 440 (598)
.+|+.+++.||+.|++.|..+|+
T Consensus 43 ~~W~~~~~~ek~~m~~~l~~~l~ 65 (65)
T TIGR03092 43 AIWKHANEQEKDEMLETLEQGVK 65 (65)
T ss_pred HHHHhcCHHHHHHHHHHHHHhcC
Confidence 47899999999999999988764
No 21
>PF14098 SSPI: Small, acid-soluble spore protein I
Probab=27.13 E-value=57 Score=27.24 Aligned_cols=22 Identities=9% Similarity=0.205 Sum_probs=19.0
Q ss_pred hhhcCCCHHHHHHHHHHHHHHc
Q 044386 418 ERYRSWAPDRQERFLNRWIKAL 439 (598)
Q Consensus 418 ~fyr~ls~~EqerLI~Nia~~L 439 (598)
..|+.+++.||+.|++.+..+|
T Consensus 44 ~~W~~~~~~ek~~m~~~l~~~l 65 (65)
T PF14098_consen 44 VIWKNSDESEKQEMVNTLEQGL 65 (65)
T ss_pred HHHHhCCHHHHHHHHHHHHhcC
Confidence 4789999999999999988764
No 22
>TIGR00695 uxuA mannonate dehydratase. This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.
Probab=26.01 E-value=90 Score=34.68 Aligned_cols=26 Identities=12% Similarity=0.065 Sum_probs=24.5
Q ss_pred cchhhhcCCCHHHHHHHHHHHHHHcC
Q 044386 415 QPGERYRSWAPDRQERFLNRWIKALC 440 (598)
Q Consensus 415 Qar~fyr~ls~~EqerLI~Nia~~L~ 440 (598)
++.++|+.|++++++.|..||...|.
T Consensus 157 ~a~~~f~~~~~~~~~~L~~~ii~~lp 182 (394)
T TIGR00695 157 RAVEEASDMSEQDIAQLTRNIIAGLP 182 (394)
T ss_pred HHHHHHHhCCHHHHHHhhhhhhhcCC
Confidence 88899999999999999999999886
No 23
>PF13945 NST1: Salt tolerance down-regulator
Probab=23.47 E-value=50 Score=33.11 Aligned_cols=18 Identities=11% Similarity=0.242 Sum_probs=15.9
Q ss_pred chhhhcCCCHHHHHHHHH
Q 044386 416 PGERYRSWAPDRQERFLN 433 (598)
Q Consensus 416 ar~fyr~ls~~EqerLI~ 433 (598)
=+.||.+|+++||..||.
T Consensus 107 LkeFW~SL~eeERr~LVk 124 (190)
T PF13945_consen 107 LKEFWESLSEEERRSLVK 124 (190)
T ss_pred HHHHHHccCHHHHHHHHH
Confidence 468999999999999984
Done!