Query 044386
Match_columns 598
No_of_seqs 237 out of 1623
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 04:17:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044386.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044386hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2isa_A Catalase; peroxidase, h 100.0 4E-143 1E-147 1166.2 47.1 473 1-480 5-479 (483)
2 1m7s_A Catalase; beta barrel, 100.0 7E-143 2E-147 1163.4 47.5 470 1-480 4-473 (484)
3 2j2m_A Catalase; functional cl 100.0 9E-143 3E-147 1164.3 47.1 479 1-487 8-489 (491)
4 3ttv_A Catalase HPII; heme ori 100.0 7E-143 2E-147 1205.6 46.3 474 1-481 80-568 (753)
5 1si8_A Catalase; N-terminal AR 100.0 7E-143 2E-147 1163.5 42.2 472 1-480 6-479 (484)
6 1gwe_A Catalase; oxidoreductas 100.0 6E-142 2E-146 1159.6 46.2 472 1-480 13-489 (503)
7 1qwl_A KATA catalase; beta bar 100.0 6E-142 2E-146 1159.6 46.2 471 1-478 8-486 (505)
8 1dgf_A Catalase; heme, NADPH, 100.0 4E-142 1E-146 1160.3 44.5 469 1-476 23-494 (497)
9 3ej6_A Catalase-3; heme, hydro 100.0 3E-141 1E-145 1186.7 47.9 472 1-480 24-510 (688)
10 1a4e_A Catalase A; oxidoreduct 100.0 4E-141 1E-145 1151.0 42.8 468 1-476 8-488 (488)
11 2iuf_A Catalase; oxidoreductas 100.0 7E-140 2E-144 1178.6 46.0 472 1-480 16-502 (688)
12 2xq1_A Peroxisomal catalase; o 100.0 9E-140 3E-144 1143.7 42.5 470 1-479 9-500 (509)
13 1sy7_A Catalase 1; heme oxidat 100.0 1E-133 3E-138 1139.9 44.8 473 1-480 20-505 (715)
14 3e4w_A Putative uncharacterize 100.0 8E-95 2.7E-99 755.1 30.3 301 26-345 12-313 (320)
15 1u5u_A Allene oxide synthase-l 100.0 7E-82 2.4E-86 669.4 19.1 301 22-351 39-371 (374)
16 3dy5_A Allene oxide synthase-l 100.0 4.4E-73 1.5E-77 665.4 16.7 312 22-356 39-375 (1066)
17 2lnb_A Z-DNA-binding protein 1 20.9 62 0.0021 26.9 2.8 52 438-492 10-63 (80)
No 1
>2isa_A Catalase; peroxidase, heme, oxidoreductase, iron, hydrogen peroxide; HET: OMT HEM; 1.97A {Vibrio salmonicida} PDB: 1m85_A* 1mqf_A* 1nm0_A* 2cag_A* 2cah_A* 1e93_A* 1h7k_A* 1h6n_A* 3hb6_A*
Probab=100.00 E-value=4.1e-143 Score=1166.23 Aligned_cols=473 Identities=41% Similarity=0.689 Sum_probs=459.2
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
|||++|+||.++++|+|+|++||+||||++|+|||+||+|||||+|++||||+||+|+|++++|++++|+|++|+++||+
T Consensus 5 ~tt~~g~pv~~~~~s~t~G~~Gp~ll~d~~l~ekl~~f~~eripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~~Gk~ 84 (483)
T 2isa_A 5 LTTAAGCPVAHNQNVQTAGKRGPQLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITKYTKAKIFSDIGKK 84 (483)
T ss_dssp CBCTTSCBCCCSSSCCEESTTSCBBTTCHHHHHHHHHHTTCCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSSTTCE
T ss_pred cccCCCCccCCCccceecCCCCCcccccHHHHHHHHHhcCCCCCcccccCCccEEEEEEEECCCchHhhhchhccCCCce
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFC 160 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl 160 (598)
|||+||||+++|++|++|+.||+|||||||||+||||||||||+||||++||++|++|+|++|++|.|++++++++|||+
T Consensus 85 tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlV~nN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~~df~ 164 (483)
T 2isa_A 85 TDMFARFSTVAGERGAADAERDIRGFSLKFYTEEGNWDLAGNNTPVFFLRDPLKFPDLNHAVKRDPRTNMRSAKNNWDFW 164 (483)
T ss_dssp EEEEEEEECSSCCTTSCSSCSSCCEEEEEEEETTEEEEEEEESSSCCSCSSGGGHHHHHHHHSBCTTTCSBCHHHHHHHH
T ss_pred eeEEEEeecCCCCCCCCCcCCCcCceEEEEecCCCccceeeeCCCccccCCHHHHHHHHHhcCCCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHH
Q 044386 161 SHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDL 240 (598)
Q Consensus 161 ~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL 240 (598)
+.+||++|+++|+|+++|+|+||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.++++.++||+++||
T Consensus 165 s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VK~h~~P~~Gv~~L~-~~ea~~~~g~d~d~~~~dL 243 (483)
T 2isa_A 165 TSLPEALHQVTIVMSDRGIPATYRHMHGFGSHTFSFINSDNERYWVKFHFVSQQGIKNLS-DAEAGELVGNDRESHQRDL 243 (483)
T ss_dssp HTCGGGHHHHHHHHSGGGSBSSGGGSCEECCSCEEEECTTCCEEEEEEEEEESSCCCBCC-HHHHHHHHHHCTTHHHHHH
T ss_pred HhChhHhhHHHHhhccCCCCCCcccccccccCceeEEcCCCCEEEEEEEEEeCCCCCCCC-HHHHHHhcCCChhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999998888999999999
Q ss_pred HHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceec
Q 044386 241 YDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYY 320 (598)
Q Consensus 241 ~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~p 320 (598)
+++|++|++|+|+|+||||+++|+.+++|||+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|||+||||+|
T Consensus 244 ~~aI~~g~~p~w~l~vQl~~~~d~~~~~~~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~p 323 (483)
T 2isa_A 244 LDSIDNQDFPKWTLKVQIMPEADAATVPYNPFDLTKVWPHKDYPLIEVGEFELNRNPQNYFAEVEQAAFNPANVVPGISF 323 (483)
T ss_dssp HHHHHTTCCCEEEEEEEEEEGGGGGTSSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEEC
T ss_pred HHHHHcCCCceEEEEEEeeChhhhhcCCCCCCCCCccCCcccCCceEEEEEEecCCCccchhhhhhhhcCcccCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCCCCCCCCCCccccc-CCCCCCcccCCCCCCCCCCCCCCCCCcccc
Q 044386 321 SNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFM-HRDEEVDYFPSRYDPTRHAERYPIPSDVIT 399 (598)
Q Consensus 321 S~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~v~n~~rDG~m~~~-~~~~~~nY~Pns~~~~~~~~~~~~~~~~v~ 399 (598)
|+|||||+|++||++||++|+|+||+|||||||+|||+||||||+|++. ++++.|||+|||++++...+.+..++..++
T Consensus 324 S~D~lLq~R~faY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~rdG~m~~~~~~~~~~~y~pn~~~~~~~~~~~~~~~~~~~ 403 (483)
T 2isa_A 324 SPDKMLQGRLFAYGDAQRYRLGVNHQHIPVNAPRCPVHSYHRDGAMRVDGNFGSTLGYEPNDQGQWAEQPDFSEPPLNLD 403 (483)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHCTTGGGSGGGSCSSCCCCCCCCCSSCCSCTTTTCCCCSSCTTCTTBCCGGGCCCCBCCC
T ss_pred CCChHHHHHHHHHHHHHHHhhcCcccccccCCCCccccCcccccccccccCCCCcccCCCCcCCCccCCCCCCCCccccc
Confidence 9999999999999999999999999999999999999999999999997 568899999999988665566777777889
Q ss_pred cceeeeeec-cCCCcccchhhhcCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhcChhhcCchHHHHHHHhCCC
Q 044386 400 GRREKACIE-KENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQISGSEASFSSQCEAKHLKVS 478 (598)
Q Consensus 400 G~~~r~~~~-~~dDf~Qar~fyr~ls~~EqerLI~Nia~~L~d~~v~~eIqeR~l~~f~kVDpdlg~~~~~rVA~~L~~~ 478 (598)
|.+.++.+. ++|||+|||+||++|++.||+|||+||+++|+ .|+++||+|++++|++||++|| ++||++||++
T Consensus 404 g~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~l~~~~~~~l~--~~~~~i~~~~~~~~~~~d~~~~----~~v~~~~~~~ 477 (483)
T 2isa_A 404 GAAAHWDHREDEDYFSQPGDLFGLMTAEKQAILFDNTARNLN--GVPKEIQLRHVTHCYKADPAYG----EGIGKLLGFD 477 (483)
T ss_dssp SCEECCCGGGCCCCSHHHHHHHHHSCHHHHHHHHHHHHHHTT--TSCHHHHHHHHHHHHHHCHHHH----HHHHHHHTCC
T ss_pred cceEeecccCCcchhhhHHHHHHcCCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHhCHHHH----HHHHHHhCCc
Confidence 998888765 67999999999999999999999999999999 6889999999999999999999 9999999987
Q ss_pred cc
Q 044386 479 LE 480 (598)
Q Consensus 479 ~~ 480 (598)
++
T Consensus 478 ~~ 479 (483)
T 2isa_A 478 IS 479 (483)
T ss_dssp GG
T ss_pred hh
Confidence 64
No 2
>1m7s_A Catalase; beta barrel, alpha helical domain, oxidoreductase; HET: HEM; 1.80A {Pseudomonas syringae} SCOP: e.5.1.1
Probab=100.00 E-value=7e-143 Score=1163.44 Aligned_cols=470 Identities=46% Similarity=0.822 Sum_probs=456.5
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
|||++|+||.++++|+|+|++||+||||++|+|||+||+|||||+|++||||+||+|+|++++|++++|+|+|| ++||+
T Consensus 4 ~tt~~G~pv~~~~~s~t~G~~Gp~ll~D~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F-~~Gk~ 82 (484)
T 1m7s_A 4 LTRDNGAVVGDNQNSQTAGAQGPVLLQDVQLLQKLQRFDRERIPERVVHARGTGVKGEFTASADISDLSKATVF-KSGEK 82 (484)
T ss_dssp CBCTTSCBCSCSSSCCEESTTSCBBTTCHHHHHHHHHHTTCCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGG-STTCE
T ss_pred ccCCCCCccCCCccceecCCCCCcccccHHHHHHHHHhcCCCCCccccCCCcceEEEEEEECCchHHhhhcccc-CCCCe
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999 78999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFC 160 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl 160 (598)
|||++|||+++|++|++|+.||+|||||||||+||||||||||+||||++||++|++|+|++|++|.|+++||+++|+|+
T Consensus 83 tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~~df~ 162 (484)
T 1m7s_A 83 TPVFVRFSSVVHGNHSPETLRDPHGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRTNLDNDSRRFDFF 162 (484)
T ss_dssp EEEEEEEECSSSCTTCCTTSCSCCEEEEEEEETTEEEEEEEESSSSCSCSCGGGHHHHHHHHSCCTTTSSCCHHHHHHHH
T ss_pred eEEEEEeccCCCCCCCCcccCCcCceEEEEecCCCcceeeecCCCccccCCHHHHHHHHHHhCcCCccCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHH
Q 044386 161 SHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDL 240 (598)
Q Consensus 161 ~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL 240 (598)
+.+||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.++++.++||+++||
T Consensus 163 s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VK~h~~P~~Gv~~L~-~~ea~~~~g~dpd~l~~DL 241 (484)
T 1m7s_A 163 SHVPEATRTLTLLYSNEGTPAGYRFMDGNGVHAYKLVNAKGEVHYVKFHWKSLQGIKNLD-PKEVAQVQSKDYSHLTNDL 241 (484)
T ss_dssp HTCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEEECTTSCEEEEEEEEEETTCCCBCC-HHHHHHHHHHCSCHHHHHH
T ss_pred HhChhHhhHHHHhhccCCCCCccccccccccCceeeEcCCCCEEEEEEEEEeCCCCCCCC-HHHHHHhcCCChhhhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999998888999999999
Q ss_pred HHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceec
Q 044386 241 YDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYY 320 (598)
Q Consensus 241 ~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~p 320 (598)
+++|++|++|+|+|+||||+++|+.+++|||+|+||+||| +|+++||+|+||+|++|+|++|||++|+|||+||||++
T Consensus 242 ~~aI~~g~~p~w~l~vQl~~~~d~~~~~~~~~D~Tk~Wpe--~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~~ 319 (484)
T 1m7s_A 242 VGAIKKGDFPKWDLYVQVLKPEELAKFDFDPLDATKIWPD--VPEKKIGQMVLNKNVDNFFQETEQVAMAPANLVPGIEP 319 (484)
T ss_dssp HHHHHTTCCCEEEEEEEEECGGGGGGSSSCTTCTTCCCSS--SCEEEEEEEEEEEECSCHHHHTTTCCCCTTCCCTTEEE
T ss_pred HHHHHcCCCceEEEEEEeecHHHhhcCCCCccCCCCcCCC--CCCEEeEEEEECCCcccchhhhhhhcccccccCCccCC
Confidence 9999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred CCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccCCCCCCCCCCCCCCCCCccccc
Q 044386 321 SNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITG 400 (598)
Q Consensus 321 S~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~~~~~~~~~~~~~~v~G 400 (598)
|+|||||+|+++|+|||++|+|+||+|||||||+|||+||||||+|++.++++.|||+|||++++...+.+..++..++|
T Consensus 320 S~DplLq~R~fsY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~rdG~m~~~~~~~~~~y~pn~~~~~~~~~~~~~~~~~~~g 399 (484)
T 1m7s_A 320 SEDRLLQGRVFSYADTQMYRLGANGLSLPVNQPKVAVNNGNQDGALNTGHTTSGVNYEPSRLEPRPADDKARYSELPLSG 399 (484)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTCTTGGGSGGGCCSSCCCSSCCCCTTCCCCCCCSCCSSSCSSSCCCCCGGGCCCCCBCCS
T ss_pred CCChHHHHHHHHHHHHHHHhhcCCcccCCCCCCCCcccCccccCcccccCCCCCCCcCCCcCCCCCCCCCCCCCCeeccc
Confidence 99999999999999999999999999999999999999999999999987789999999999876555567777788899
Q ss_pred ceeeeeeccCCCcccchhhhcCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhcChhhcCchHHHHHHHhCCCcc
Q 044386 401 RREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQISGSEASFSSQCEAKHLKVSLE 480 (598)
Q Consensus 401 ~~~r~~~~~~dDf~Qar~fyr~ls~~EqerLI~Nia~~L~d~~v~~eIqeR~l~~f~kVDpdlg~~~~~rVA~~L~~~~~ 480 (598)
.+.++...++|||+|||+||++|++.||+|||+||+++|+ .|+++||+|++++|++||++|| ++||++|+++.+
T Consensus 400 ~~~~~~~~~~d~~~q~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~i~~~~~~~~~~~d~~~~----~~v~~~~~~~~~ 473 (484)
T 1m7s_A 400 TTQQAKITREQNFKQAGDLYRSYSAKEKTDLVQKFGESLA--DTLTESKNIMLSYLYKEDPNYG----TRVAEVAKGDLS 473 (484)
T ss_dssp BEECCCCSCCCCSHHHHHHHHHSCHHHHHHHHHHHHHHHT--TSCHHHHHHHHHHHHHHCHHHH----HHHHHHTTCCHH
T ss_pred ceeeecCCCcchhhhHHHHHHhCCHHHHHHHHHHHHHHHh--ccCHHHHHHHHHHHHHhCHHHH----HHHHHHhCCChH
Confidence 9888877678999999999999999999999999999999 6889999999999999999999 999999997764
No 3
>2j2m_A Catalase; functional class, oxidoreductase; HET: HEM; 2.4A {Exiguobacterium oxidotolerans}
Probab=100.00 E-value=9e-143 Score=1164.27 Aligned_cols=479 Identities=46% Similarity=0.838 Sum_probs=457.9
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
|||++|+||.++++|+|+|++||+||||++|+|||+||+|||||+|++||||+||+|+|++++|++++|+|++|+++||+
T Consensus 8 ~tt~~G~pv~~~~~s~t~G~~Gp~ll~d~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~~Gk~ 87 (491)
T 2j2m_A 8 LTTNQGVPIGDNQNSRTAGRRGPTLLEDYQLIEKIAHFDRERVPERVVHARGFGAHGVFKVKNSMKKYTKAAFLQEEGTE 87 (491)
T ss_dssp CBCTTCCBCSCSSCCEESSTTSCBBTTCHHHHHHHHHHTTCCCBCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSSTTCE
T ss_pred cccCCCCccCCCccceecCCCCCcccccHHHHHHHHhhcCCCCCCccccCCcceeEEEEEECCcchHhhhchhccCCCcc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFC 160 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl 160 (598)
|||++|||+++|++|++|+.||+|||||||||+||||||||||+||||++||++|++|+|++|++|.|++++++++|||+
T Consensus 88 tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlV~nN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~wdf~ 167 (491)
T 2j2m_A 88 VPVFARFSTVIHGTHSPETLRDPRGFSVKFYTEEGNWDFVGNNLPVFFIRDAMKFPDMVHSLKPDPRTNIQDPDRYWDFM 167 (491)
T ss_dssp EEEEEEEECSSSCTTCCTTSCSCCEEEEEEEETTEEEEEEEESSSSCSCSSGGGHHHHHHHHSCCTTTCSCCHHHHHHHH
T ss_pred ceeEeeccCCCCCCCCCcccCCcCceEEEEecCCcceeeeecCCCccccCCHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHH
Q 044386 161 SHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDL 240 (598)
Q Consensus 161 ~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL 240 (598)
+.+||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.++++.++||+++||
T Consensus 168 s~~Pes~h~~~~l~sdrg~P~syr~m~g~g~htf~~vn~~G~~~~VK~h~~P~~Gv~~L~-~~ea~~~~g~d~d~~~~DL 246 (491)
T 2j2m_A 168 TLRPESTNMLMHIFTDEGIPASYRKMRGSSVHSFKWVNAHGNTVYIKLRWVPKEGVHNLS-ADEATEVQGKDFNHASNDT 246 (491)
T ss_dssp HHSGGGHHHHHHHTSGGGSBSCGGGCCEECCSCEEEECTTCCEEEEEEEEEETTCCCBCC-HHHHHHHHHHCTTHHHHHH
T ss_pred HhCchHHhHHHHHhccCCCCCChhhccCccccceeeEcCCCCEEEEEEEEEeCCCCCCCC-HHHHHHhcCCChhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999998888999999999
Q ss_pred HHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceec
Q 044386 241 YDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYY 320 (598)
Q Consensus 241 ~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~p 320 (598)
+++|++|++|+|+|+||||+++|+.+++|||+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|||+||||+|
T Consensus 247 ~~aI~~G~~p~w~l~vQl~~~~d~~~~~~~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~p 326 (491)
T 2j2m_A 247 FQAIENGDFPEWDLFVQVLDPADVENFDFDPLDATKDWFEDVIPFQHVGTMTLNKNVDNYFAETESVGFNPGVLVPGMLP 326 (491)
T ss_dssp HHHHHTTCCCEEEEEEEEECGGGGGGSSSCTTCTTCCCCTTTSCCEEEEEEEEEEECSCTCCCCCTCCCCTTCCCTTEEE
T ss_pred HHHHHcCCCCeEEEEEEeechhhhhcCCCCCCCCCccCCcccCCcEEEEEEEecCCCcchhhhhhhhhcCcccccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccCCCCCC-CCCCCCCCCCCcccc
Q 044386 321 SNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDP-TRHAERYPIPSDVIT 399 (598)
Q Consensus 321 S~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~-~~~~~~~~~~~~~v~ 399 (598)
|+|||||+|++||++||++|+|+||+|||||||+|||+||||||+|++.++++.|||+|||+++ +...+.+..++..++
T Consensus 327 S~D~lLq~R~faY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~rdG~m~~~~~~~~~~y~pn~~~~~~~~~~~~~~~~~~~~ 406 (491)
T 2j2m_A 327 SEDKLLQGRLFSYSDTQRHRIGPNYQQLPINCPFAQVNNYQRDGAMPFKQQTSSVNYEPNRYQDEPKQTPEYTEDTQPLH 406 (491)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTCTTGGGSTTTCCSSCCCCSCCCCSSCTTCCCCSCCSSSCSCTTSCBCCGGGSCCCEECC
T ss_pred CCChHHHHHHHHHHHHHHHhhcCccccCCCCCCCcccCCcchhhhcccccCCCCCCccCCcCCCCccCCCCCCCCCceec
Confidence 9999999999999999999999999999999999999999999999997568899999999986 444555667777889
Q ss_pred ccee-eeeeccCCCcccchhhhcCCCHHHHHHHHHHHHHHcCCCCCCHH-HHHHHHHHHHhcChhhcCchHHHHHHHhCC
Q 044386 400 GRRE-KACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHE-VRSIWVSYWSQISGSEASFSSQCEAKHLKV 477 (598)
Q Consensus 400 G~~~-r~~~~~~dDf~Qar~fyr~ls~~EqerLI~Nia~~L~d~~v~~e-IqeR~l~~f~kVDpdlg~~~~~rVA~~L~~ 477 (598)
|.+. ++.+.++|||+|||+||++|++.||+|||+||+++|+ .|+.+ ||+|++++|++||++|| ++||++||+
T Consensus 407 g~~~~~~~~~~~d~~~q~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~~i~~~~~~~~~~~d~~~~----~~v~~~~~~ 480 (491)
T 2j2m_A 407 DDIHGRLEIEKTNNFGQAGEVYRRMTEEEQMALLNNLVNDLQ--QVRHENTVLLAICNFYRADASLG----EKLSEALNV 480 (491)
T ss_dssp CSEEEECCCSCCCTTHHHHHHHHHSCHHHHHHHHHHHHHHHT--TCCCHHHHHHHHHHHHHHCHHHH----HHHHHHTTC
T ss_pred cceEeecccCCcchhhhhHHHHHcCCHHHHHHHHHHHHHHHc--CCCcHHHHHHHHHHHHHhCHHHH----HHHHHHhCC
Confidence 9988 6666678999999999999999999999999999999 68665 99999999999999999 999999998
Q ss_pred Ccchhhhhhh
Q 044386 478 SLELEHWMLL 487 (598)
Q Consensus 478 ~~~~~~~~~~ 487 (598)
+.. +-++.|
T Consensus 481 ~~~-~~~~~~ 489 (491)
T 2j2m_A 481 DIK-PFLQQM 489 (491)
T ss_dssp CCT-TC----
T ss_pred chH-HHHHHh
Confidence 665 445444
No 4
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=100.00 E-value=7.2e-143 Score=1205.59 Aligned_cols=474 Identities=43% Similarity=0.742 Sum_probs=454.6
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
|||++|+||.++++|+|+|.+||+||||++|+|||+||+|||||||++||||+||+|+|++++|++++|+|++|+++||+
T Consensus 80 ~Tt~~G~pv~~~~~s~t~g~rGp~llqD~~l~eklahFdrErIPER~vHAKG~gA~G~F~vt~d~s~~t~A~~F~~~Gk~ 159 (753)
T 3ttv_A 80 LTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKIAHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKI 159 (753)
T ss_dssp CBCTTSCBBSCTTCCEEESTTSCBBTTCHHHHHHHHHHHTCCCCCCSSCCSEEEEEEEEEESSCCTTTCCCGGGSCTTCC
T ss_pred cccCCCCccCCCccceecCCCCccHHHHHHHHHHHHHhcccCCCccccCCCcceEEEEEEECCchhHHHhhhhhcCCCce
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCCh----HHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEY----WRI 156 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~----~~~ 156 (598)
|||+||||+++|++|++|+.||+|||||||||+||||||||||+||||||||++|++|+|++|++|.|+++++ +++
T Consensus 160 tPv~vRFStv~G~~gs~Dt~rD~RGfAvKFyt~eGn~DlVgnN~PVFFirDp~kFpdfiha~k~~P~t~~~~~~~~~~~~ 239 (753)
T 3ttv_A 160 TPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTF 239 (753)
T ss_dssp EEEEEEEECSSSCTTSCTTSSSCCEEEEEEEETTEEEEEEEESSSSCSCSCGGGHHHHHHHHSCCTTTCCCTTCCCSHHH
T ss_pred eEEEEEecCCCCCCCCCccCCCCCcEEEEEEcCCCCcccccccCCccccCCHHHHHHHHHHhhcCCccCCCCcccchHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999875 699
Q ss_pred HHHHHhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchh
Q 044386 157 LDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHA 236 (598)
Q Consensus 157 ~dfl~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl 236 (598)
|||++.+||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.++.+.|+|||
T Consensus 240 wdF~s~~PEs~h~~~~l~sdrg~P~Syr~m~g~g~htf~~vn~~G~~~~VKfh~~p~~G~~~l~-~~EA~~~~g~dpD~l 318 (753)
T 3ttv_A 240 WDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLV-WDEAQKLTGRDPDFH 318 (753)
T ss_dssp HHHHHHCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEEECTTCCEEEEEEEEEETTCCCBCC-HHHHHHHHHHCTTHH
T ss_pred HHHHHhCHHHHHHHHHHhccCCCCCCcccCCcccccceEEEcCCCCEEEEEEEEEECCCCCCCC-HHHHHHhhCCCchHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999888999999
Q ss_pred HHHHHHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCC
Q 044386 237 TQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVP 316 (598)
Q Consensus 237 ~~dL~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvp 316 (598)
++||+++|++|+||+|+|+||||+++|+.+|+|||+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|+|+||
T Consensus 319 ~~DL~~~I~~G~~p~w~l~vQv~~~~d~~~~~f~~~D~TK~WPe~~~Pl~~VG~l~Lnrnp~n~fae~Eq~aF~P~~lvp 398 (753)
T 3ttv_A 319 RRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVP 398 (753)
T ss_dssp HHHHHHHHHHTCCCEEEEEEEEEEGGGTTCSSSCTTCTTSCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCT
T ss_pred HHHHHHHHhcCCCCeEEEEEEeechhhhhcCCCCCccCCccCCCcCccceeeeEEEecCCCcchhhhhhcceeccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceecCCChhhHhhhhhhHHHhHhhc-CCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccCCCCCC--CCCCC----
Q 044386 317 GIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDP--TRHAE---- 389 (598)
Q Consensus 317 Gi~pS~DpilqaR~~aY~dS~~~Rl-g~N~~qlPvN~P~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~--~~~~~---- 389 (598)
||++|+|||||+|+|+|+|||+||| |+||+|||||||+|||+||||||+|++.++++.|||+||||++ +...+
T Consensus 399 GI~~S~DplLq~R~fsY~dtqr~RlgG~N~~qlPvN~p~~~~~~~~rDG~m~~~~~~~~~~Y~pns~~~~~~~~~~~~~~ 478 (753)
T 3ttv_A 399 GLDFTNDPLLQGRLYSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPK 478 (753)
T ss_dssp TEECCCCHHHHHHHHHHHHHHHHHHTSTTGGGSGGGCCSSCCCCSCCCCTTCCCEECCSCSSSSCSTTTTCSBCCCCCSS
T ss_pred CcCCCCCcHhhhhhhhhHHHHHHhccCCCcccCCCCCCCCcccCccccccccccCCCCCCceeCCCCCCCCcccCccccc
Confidence 9999999999999999999999999 9999999999999999999999999999888999999999975 22221
Q ss_pred --CCCCCCcccccceeeeeec-cCCCcccchhhhcCCCHHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHHhcChhhcC
Q 044386 390 --RYPIPSDVITGRREKACIE-KENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRV-THEVRSIWVSYWSQISGSEAS 465 (598)
Q Consensus 390 --~~~~~~~~v~G~~~r~~~~-~~dDf~Qar~fyr~ls~~EqerLI~Nia~~L~d~~v-~~eIqeR~l~~f~kVDpdlg~ 465 (598)
.+..++..++|.+.|+... .+|||+|||+|||+|++.||+|||+||+++|+ .| +++||+||+++|++||++||
T Consensus 479 ~~~~~~~~~~~~g~~~~~~~~~~~d~f~Q~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~~i~~r~~~~~~~~d~~l~- 555 (753)
T 3ttv_A 479 RGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELS--KVVRPYIRERVVDQLAHIDLTLA- 555 (753)
T ss_dssp SCCBCCCCCEEEEEEEECCCGGGCCCSHHHHHHHHHSCHHHHHHHHHHHHHHHH--TCSSHHHHHHHHHHHHTTCHHHH-
T ss_pred ccccccCCcccccceEeecccCccchhHHHHHHHHhCCHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHCHHHH-
Confidence 2445566788988887654 57899999999999999999999999999999 56 68899999999999999999
Q ss_pred chHHHHHHHhCCCcch
Q 044386 466 FSSQCEAKHLKVSLEL 481 (598)
Q Consensus 466 ~~~~rVA~~L~~~~~~ 481 (598)
++||++||++++.
T Consensus 556 ---~~va~~l~~~~~~ 568 (753)
T 3ttv_A 556 ---QAVAKNLGIELTD 568 (753)
T ss_dssp ---HHHHHHHTCCCCH
T ss_pred ---HHHHHHhCCCCCC
Confidence 9999999998763
No 5
>1si8_A Catalase; N-terminal ARM, anti-parallel beta-barrel, wrapping region, terminal helical region, tetramer, heme group, oxidoreducta; HET: HEM; 2.30A {Enterococcus faecalis} SCOP: e.5.1.1
Probab=100.00 E-value=6.9e-143 Score=1163.48 Aligned_cols=472 Identities=42% Similarity=0.709 Sum_probs=456.8
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
|||++|+||.++++|+|+|++||+||||++|+|||+||+|||||+|++||||+||+|+|++++|++++|+|++|+++||+
T Consensus 6 ~tt~~G~pv~~~~~s~t~G~~Gp~ll~D~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~~Gk~ 85 (484)
T 1si8_A 6 LTTSQGSPVGDNQNSLTAGEFGPVLIQDVHLLEKLAHFNRERVPERVVHAKGAGAHGIFKVSQSMAQYTKADFLSEVGKE 85 (484)
T ss_dssp CBCTTSCBCSCSSSCEEESTTSCBBTTCHHHHHHHHHHHTCCCCCCSSCCSEEEEEEEEEESSCCTTTCCCGGGSSTTCE
T ss_pred cccCCCcccCCCccceecCCCCCcccccHHHHHHHHHhcCCCCCCccccCCcceeEEEEEECCchhHhhhchhccCCCce
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFC 160 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl 160 (598)
|||++|||+++|++|++|+.||+|||||||||+||||||||||+||||++||++|++|+|++|++|.|++++++++|||+
T Consensus 86 tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlV~nN~PvFfirD~~kFpd~i~a~k~~p~t~~~d~~~~wdf~ 165 (484)
T 1si8_A 86 TPLFARFSTVAGELGSSDTLRDPRGFALKFYTDEGNYDLVGNNTPIFFIRDAIKFPDFIHSQKRNPRTHLKSPEAVWDFW 165 (484)
T ss_dssp EEEEEEEECSSCCTTCCSSSSSCCEEEEEEEETTEEEEEEEESSSSCSCSCGGGHHHHHHHHSBCTTTCSBCHHHHHHHH
T ss_pred eeEEEEecCCCCCCCCCcccCCcCceEEEEecCCCceeeeeccCcccccCCHHHHHHHHHhcCCCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHH
Q 044386 161 SHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDL 240 (598)
Q Consensus 161 ~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL 240 (598)
+.+||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.++++.++||+++||
T Consensus 166 s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VK~h~~P~~Gv~~L~-~~ea~~~~g~d~d~~~~DL 244 (484)
T 1si8_A 166 SHSPESLHQVTILMSDRGIPLSFRHMHGFGSHTFKWVNAAGEVFFVKYHFKTNQGIKNLE-SQLAEEIAGKNPDFHIEDL 244 (484)
T ss_dssp HTCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEEECTTCCEEEEEEEEEETTCCCBCC-HHHHHHHHHHCTTHHHHHH
T ss_pred HhCchhHHHHHHHhccCCCCCCcccccccccCceEEEcCCCCEEEEEEEEEeCCCCCCCC-HHHHHHhcCCChhHhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999998888999999999
Q ss_pred HHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceec
Q 044386 241 YDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYY 320 (598)
Q Consensus 241 ~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~p 320 (598)
+++|++|++|+|+|+||||+++|+.+++|||+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|||+||||+|
T Consensus 245 ~~aI~~g~~p~w~l~vQl~~~~d~~~~~~~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~p 324 (484)
T 1si8_A 245 HNAIENQEFPSWTLSVQIIPYADALTMKETLFDVTKTVSQKEYPLIEVGTMTLNRNPENYFAEVEQVTFSPGNFVPGIEA 324 (484)
T ss_dssp HHHHHTTCCCEEEEEEEEEEHHHHTTCHHHHTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEEC
T ss_pred HHHHHCCCCceEEEEEEeecchhhhcCCCCCCcCCccCCcccCCeeEeEEEEECCCccccccccccccccccccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccCCCCCC-CCCCCCCCCCCcccc
Q 044386 321 SNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDP-TRHAERYPIPSDVIT 399 (598)
Q Consensus 321 S~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~-~~~~~~~~~~~~~v~ 399 (598)
|+|||||+|++||++||++|+|+||+|||||||+|||+||||||+|++.++++.|||+|||+++ +...+.+..++..++
T Consensus 325 S~D~lLq~R~fsY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~rdG~m~~~~~~~~~~y~pn~~~~~~~~~~~~~~~~~~~~ 404 (484)
T 1si8_A 325 SPDKLLQGRLFAYGDAHRHRVGANSHQLPINQAKAPVNNYQKDGNMRFNNGNSEINYEPNSYTETPKEDPTAKISSFEVE 404 (484)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTCTTGGGSGGGCCSSCCCCSCCCCTTCSCCCSCSCCCSSCSCTTSCBCCGGGCCCCCBCC
T ss_pred CCChhhhhHHHHHHHHHHHhhcCccccCCCCCCCCccCCCCcccccccccCCCCCCccCCcCCCCccCCCCCCCCCeeec
Confidence 9999999999999999999999999999999999999999999999999889999999999986 444455667777889
Q ss_pred cceeeeeeccCCCcccchhhhcCCCHHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHHhcChhhcCchHHHHHHHhCCC
Q 044386 400 GRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRV-THEVRSIWVSYWSQISGSEASFSSQCEAKHLKVS 478 (598)
Q Consensus 400 G~~~r~~~~~~dDf~Qar~fyr~ls~~EqerLI~Nia~~L~d~~v-~~eIqeR~l~~f~kVDpdlg~~~~~rVA~~L~~~ 478 (598)
|.+.++.+ ++|||+|||+|||+|++.||+|||+||+++|+ .| +++||+|++++|++||++|| ++||++||+.
T Consensus 405 g~~~~~~~-~~~~~~q~~~~~~~~~~~~~~~l~~~~~~~l~--~~~~~~i~~~~~~~~~~~d~~~~----~~v~~~~~~~ 477 (484)
T 1si8_A 405 GNVGNYSY-NQDHFTQANALYNLLPSEEKENLINNIAASLG--QVKNQEIIARQIDLFTRVNPEYG----ARVAQAIKQQ 477 (484)
T ss_dssp SBEEECCC-CCCCSHHHHHHHHHSCHHHHHHHHHHHHHHHT--TCCCHHHHHHHHHHHHHHCHHHH----HHHHHHHHTC
T ss_pred CceEEecc-ccchhhhHHHHHHcCCHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhCHHHH----HHHHHHhCCc
Confidence 99888776 78999999999999999999999999999999 68 78999999999999999999 9999999887
Q ss_pred cc
Q 044386 479 LE 480 (598)
Q Consensus 479 ~~ 480 (598)
..
T Consensus 478 ~~ 479 (484)
T 1si8_A 478 AH 479 (484)
T ss_dssp --
T ss_pred cc
Confidence 64
No 6
>1gwe_A Catalase; oxidoreductase, hdyrogen-peroxide:hydrogen peroxide oxidoreductase; HET: HEM; 0.88A {Micrococcus luteus} SCOP: e.5.1.1 PDB: 1gwh_A* 1hbz_A* 1gwf_A*
Probab=100.00 E-value=5.5e-142 Score=1159.62 Aligned_cols=472 Identities=38% Similarity=0.632 Sum_probs=455.7
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
|||++|+||.++++|+|+|++||+||||++|+|||+||+|||||+|++||||+||+|+|++++|++++|+|+||++ ||+
T Consensus 13 ~tt~~G~pv~~~~~s~t~G~~Gp~ll~D~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~di~~~t~A~~F~~-Gk~ 91 (503)
T 1gwe_A 13 STRQNGAPAVSDRQSLTVGSEGPIVLHDTHLLETHQHFNRMNIPERRPHAKGSGAFGEFEVTEDVSKYTKALVFQP-GTK 91 (503)
T ss_dssp CBCTTSSBCSCSSCCCBSTTTSCBCTTCHHHHHHHHHHTTCCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGST-TCE
T ss_pred eecCCCcccCCCccceecCCCCCcccccHHHHHHHHHhcCCCCCCcccCCCcceEEEEEEECCchHHhhhhhhccC-CCe
Confidence 6999999999999999999999999999999999999999999999999999999999999999999999999997 999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFC 160 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl 160 (598)
|||++|||+++|++|++|+.||+|||||||||+||||||||||+||||++||++|++|+|++|++|.|+++|++++|||+
T Consensus 92 tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~wdf~ 171 (503)
T 1gwe_A 92 TETLLRFSTVAGELGSPDTWRDVRGFALRFYTEEGNYDLVGNNTPIFFLRDPMKFTHFIRSQKRLPDSGLRDATMQWDFW 171 (503)
T ss_dssp EEEEEEEECSSSCTTSCTTSSCCCEEEEEEEETTEEEEEEEESSSCCSCSSGGGHHHHHHHHSBCTTTCCBCHHHHHHHH
T ss_pred eeEEEEeccCCCCCCCCcccCCcCceEEEEecCCCceeEeecCCCccccCCHHHHHHHHHhcCCCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHH
Q 044386 161 SHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDL 240 (598)
Q Consensus 161 ~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL 240 (598)
+.+||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.++++.++||+++||
T Consensus 172 s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VKfh~~P~~Gv~~L~-~~ea~~~~g~d~d~~~~DL 250 (503)
T 1gwe_A 172 TNNPESAHQVTYLMGPRGLPRTWREMNGYGSHTYLWVNAQGEKHWVKYHFISQQGVHNLS-NDEATKIAGENADFHRQDL 250 (503)
T ss_dssp HTCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEEECTTCCEEEEEEEEEETTCCCBCC-HHHHHHHHHHCTTHHHHHH
T ss_pred HhChhhhhHHHHhhccCCCCCCcccccccccCceEEEcCCCCEEEEEEEEEeCCCCCCCC-HHHHHHhcCCCccHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999998888999999999
Q ss_pred HHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceec
Q 044386 241 YDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYY 320 (598)
Q Consensus 241 ~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~p 320 (598)
+++|++|++|+|+|+||||+++|+.+++|||+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|||+||||+|
T Consensus 251 ~~aI~~G~~p~w~l~VQl~~~~d~~~~~~~~~D~Tk~WPe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~p 330 (503)
T 1gwe_A 251 FESIAKGDHPKWDLYIQAIPYEEGKTYRFNPFDLTKTISQKDYPRIKVGTLTLNRNPENHFAQIESAAFSPSNTVPGIGL 330 (503)
T ss_dssp HHHHHTTCCCEEEEEEEEEETTHHHHCSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEEC
T ss_pred HHHHHcCCCCeEEEEEEeeCHHHHhcCCCCCCcCceeCCcccCCceEEEEEEecCCCccccccccccccccccccCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccCCCCCC-CCCCCCCCCCCcccc
Q 044386 321 SNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDP-TRHAERYPIPSDVIT 399 (598)
Q Consensus 321 S~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~-~~~~~~~~~~~~~v~ 399 (598)
|+|||||+|+++|++||++|+|+||+|||||||+|||+||||||+|++.++++.|||+|||+++ +...+.+..++..++
T Consensus 331 S~DplLq~R~faY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~rdG~m~~~~~~~~~~y~pn~~~~~~~~~~~~~~~~~~~~ 410 (503)
T 1gwe_A 331 SPDRMLLGRAFAYHDAQLYRVGAHVNQLPVNRPKNAVHNYAFEGQMWYDHTGDRSTYVPNSNGDSWSDETGPVDDGWEAD 410 (503)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTCTTGGGSGGGCCSSCCCCSCCCCTTCCSCCTTCCSSSSCSSSCCCCCCCSSCTTCCCCC
T ss_pred CCChHHHHHHHHHHHHHHHhccCCcccCCcCCCCCccCCCchhhccccccCCCCCCcCCCcCCCCccCCCCCCCCCceec
Confidence 9999999999999999999999999999999999999999999999999889999999999986 445556667777889
Q ss_pred cceeeee--ec-cCCCcccchhhhc-CCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhcChhhcCchHHHHHHHh
Q 044386 400 GRREKAC--IE-KENNFKQPGERYR-SWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQISGSEASFSSQCEAKHL 475 (598)
Q Consensus 400 G~~~r~~--~~-~~dDf~Qar~fyr-~ls~~EqerLI~Nia~~L~d~~v~~eIqeR~l~~f~kVDpdlg~~~~~rVA~~L 475 (598)
|.+.+.. +. ++|||+|||+||+ +|++.||+|||+||+++|+ .|+++||+|++++|++||++|| ++||++|
T Consensus 411 g~~~~~~~~~~~~~d~~~Q~~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~i~~~~~~~~~~~d~~~~----~~v~~~l 484 (503)
T 1gwe_A 411 GTLTREAQALRADDDDFGQAGTLVREVFSDQERDDFVETVAGALK--GVRQDVQARAFEYWKNVDATIG----QRIEDEV 484 (503)
T ss_dssp CCCCCCCCCCCTTCCSSHHHHHHHHHTSCHHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHCHHHH----HHHHHHH
T ss_pred CceeEEeecCCCCcchhhhhHHHHHHcCCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHhCHHHH----HHHHHHh
Confidence 9855544 43 6789999999999 9999999999999999999 6889999999999999999999 9999999
Q ss_pred CCCcc
Q 044386 476 KVSLE 480 (598)
Q Consensus 476 ~~~~~ 480 (598)
++..+
T Consensus 485 ~~~~~ 489 (503)
T 1gwe_A 485 KRHEG 489 (503)
T ss_dssp HTTCC
T ss_pred CCCCc
Confidence 98775
No 7
>1qwl_A KATA catalase; beta barrel, azide complex, oxyferryl complex, oxidoreductas; HET: HEM; 1.60A {Helicobacter pylori} SCOP: e.5.1.1 PDB: 1qwm_A* 2a9e_A* 2iqf_A*
Probab=100.00 E-value=6.3e-142 Score=1159.61 Aligned_cols=471 Identities=45% Similarity=0.764 Sum_probs=454.8
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
|||++|+||.++++|+|+|++||+||||++|+|||+||+|||||+|++||||+||+|+|++++|++++|+|+||+++||+
T Consensus 8 ~tt~~G~pv~~~~~s~t~G~~Gp~ll~D~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~di~~~t~A~~F~~~Gk~ 87 (505)
T 1qwl_A 8 QTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKIFSKVGKK 87 (505)
T ss_dssp CBCTTSCBCSCSSCCCBSSTTSCBBTTCHHHHHHHHHHTTCCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSSTTCE
T ss_pred ccCCCCCccCCCccceecCCCCCCcCCcHHHHHHHHHhcCCCCCCccccCCcceeEEEEEECCCchHhhhchhccCCCce
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFC 160 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl 160 (598)
|||++|||+++|++|++|+.||+|||||||||+||||||||||+||||++||++|++|+|++|++|.|++++++++|+|+
T Consensus 88 tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~kFpd~iha~k~~p~t~~~d~~~~wdf~ 167 (505)
T 1qwl_A 88 TECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFW 167 (505)
T ss_dssp EEEEEEEECSSCCTTSCSSSSSCCEEEEEEEETTEEEEEEEESSSCCSCSSGGGHHHHHHHHSCCTTTCSCCHHHHHHHH
T ss_pred eeEEEEeccCCCCCCCCcccCCcCceEEEEecCCCceeEeecCCCccccCCHHHHHHHHHhcCCCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHH
Q 044386 161 SHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDL 240 (598)
Q Consensus 161 ~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL 240 (598)
+.+||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.++++.++||+++||
T Consensus 168 s~~PEs~h~~~~l~sdrg~P~syr~m~g~g~htf~~vn~~G~~~~VKfh~~P~~Gv~~L~-~~ea~~~~g~d~d~~~~DL 246 (505)
T 1qwl_A 168 SNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLT-NEEAAEIRKHDPDSNQRDL 246 (505)
T ss_dssp HHCGGGHHHHHHHHSGGGSBSSGGGSCEECCSCEEEECTTCCEEEEEEEEEETTCCCBCC-HHHHHHHHTTCTTHHHHHH
T ss_pred HhChhHHHHHHHHhccCCCCCCcccccccccCceeEEcCCCCEEEEEEEEEeCCCcCCCC-HHHHHHhcCCCccHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceec
Q 044386 241 YDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYY 320 (598)
Q Consensus 241 ~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~p 320 (598)
+++|++|++|+|+|+||||+++|+.+++|||+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|||+||||+|
T Consensus 247 ~~aI~~G~~p~w~l~VQl~~~~d~~~~~~~~~D~Tk~WPe~~~P~i~VG~L~Lnrnp~n~fae~EqlaF~P~~~vpGI~p 326 (505)
T 1qwl_A 247 FDAIARGDYPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYTQDYPLMEVGIVELNKNPENYFAEVEQAAFTPANVVPGIGY 326 (505)
T ss_dssp HHHHHTTCCCEEEEEEEEEEGGGTTTCSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEEC
T ss_pred HHHHHcCCCceEEEEEEeechHHhhcCCCCCCcCCeeCCccCCCceEEEEEEECCCcccchhhhhhhhcCccccCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccCCCCCCCCCCCCCCCCCccccc
Q 044386 321 SNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITG 400 (598)
Q Consensus 321 S~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~~~~~~~~~~~~~~v~G 400 (598)
|+|||||+|++||++||++|+|+||+|||||||+|||+||||||+|+..++++.|||+|||++++...+.+..++..++|
T Consensus 327 S~DplLq~R~fsY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~rdG~m~~~~~~~~~~y~pns~~~~~~~~~~~~~~~~~~g 406 (505)
T 1qwl_A 327 SPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAH 406 (505)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCTTGGGSGGGSCSSCCCCSCCCCTTCCCTTTTCCCCSSCSSSCCCCCGGGCCCCBCGGG
T ss_pred CCChhhhhHHhHHHHHHHHhccCCcccCCCCCCCCccCCCCccccccccCCCCCCCccCCcCCCccCCCCCCCCCccccC
Confidence 99999999999999999999999999999999999999999999999335688999999999876555566777778888
Q ss_pred -----ceeeeeec--cCCCcccchhhhcCCCHHHHHHHHHHHHHHcCCCCCC-HHHHHHHHHHHHhcChhhcCchHHHHH
Q 044386 401 -----RREKACIE--KENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVT-HEVRSIWVSYWSQISGSEASFSSQCEA 472 (598)
Q Consensus 401 -----~~~r~~~~--~~dDf~Qar~fyr~ls~~EqerLI~Nia~~L~d~~v~-~eIqeR~l~~f~kVDpdlg~~~~~rVA 472 (598)
.+.++.+. ++|||+|||+|||+|++.||+|||+||+++|+ .|+ ++||+|++++|++||++|| ++||
T Consensus 407 ~~~~~~~~~~~~~~~~~d~~~Q~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~~i~~~~~~~~~~~d~~~~----~~v~ 480 (505)
T 1qwl_A 407 IEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESLA--HVTHKEIVDKQLEHFKKADPKYA----EGVK 480 (505)
T ss_dssp TCSCCCBSCCCHHHHCCCCSHHHHHHHHHSCHHHHHHHHHHHHHHHT--TCCCHHHHHHHHHHHHHHCHHHH----HHHH
T ss_pred cccceeeEeeccCCCCcchhhhhHHHHHhCCHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHhCHHHH----HHHH
Confidence 67777654 67899999999999999999999999999999 687 8999999999999999999 9999
Q ss_pred HHhCCC
Q 044386 473 KHLKVS 478 (598)
Q Consensus 473 ~~L~~~ 478 (598)
++|+++
T Consensus 481 ~~l~~~ 486 (505)
T 1qwl_A 481 KALEKH 486 (505)
T ss_dssp HHHHHH
T ss_pred HHhCCC
Confidence 999854
No 8
>1dgf_A Catalase; heme, NADPH, hydrogen peroxide, oxidoreductase; HET: HEM NDP; 1.50A {Homo sapiens} SCOP: e.5.1.1 PDB: 1dgg_A* 1f4j_A* 1qqw_A* 1dgh_A* 1dgb_A* 3rgp_A* 3re8_A* 3rgs_A* 3nwl_A* 4blc_A* 1th2_A* 1th3_A* 1th4_A* 1tgu_A* 7cat_A* 8cat_A*
Probab=100.00 E-value=4.4e-142 Score=1160.28 Aligned_cols=469 Identities=43% Similarity=0.746 Sum_probs=455.9
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
|||++|+||.++++|+|+|++||+||||++|+|||+||+|||||+|++||||+||+|+|++++|++++|+|++|+++||+
T Consensus 23 ~tt~~G~pv~~~~~s~t~G~~Gp~ll~D~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~~Gk~ 102 (497)
T 1dgf_A 23 LTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKK 102 (497)
T ss_dssp CBCTTCCBCSCSSSCEEESTTSCBBTTCHHHHHHHHHHTTCCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSSTTCE
T ss_pred ccCCCCcccCCCccceecCCCCCcccccHHHHHHHHhhcCCCCCCcccCCCcceeEEEEEECCChhHhhhchhccCCCce
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFC 160 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl 160 (598)
|||+||||+++|++|++|+.||+|||||||||+||||||||||+||||++||++|++|+|++|++|.|++++++++|+|+
T Consensus 103 tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~wdf~ 182 (497)
T 1dgf_A 103 TPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFW 182 (497)
T ss_dssp EEEEEEEECSSSCTTSCSSSSSCCEEEEEEEETTEEEEEEEESSSSCSCSSGGGHHHHHHHHSBCTTTCSBCHHHHHHHH
T ss_pred eeEEEEeecCCCCCCCCCcCCCcCceEEEEecCCCceeEeecCCCccccCCHHHHHHHHHhcCCCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHH
Q 044386 161 SHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDL 240 (598)
Q Consensus 161 ~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL 240 (598)
+.+||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.++++.++||+++||
T Consensus 183 s~~PEs~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VKfh~~P~~Gv~~L~-~~ea~~~~g~d~d~~~~DL 261 (497)
T 1dgf_A 183 SLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLS-VEDAARLSQEDPDYGIRDL 261 (497)
T ss_dssp HHCGGGHHHHHHHTSGGGSBSSSTTSCEECCSCEEEECTTSCEEEEEEEEEETTCCCBCC-HHHHHHHHHHCTTHHHHHH
T ss_pred HhCchhhhHHHHHhccCCCCCCccccccccccceEEEcCCCCEEEEEEEEEeCCCCCCCC-HHHHHHhcCCCccHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999998888999999999
Q ss_pred HHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceec
Q 044386 241 YDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYY 320 (598)
Q Consensus 241 ~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~p 320 (598)
+++|++|++|+|+|+||||+++|+.+++|||+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|||+||||+|
T Consensus 262 ~~aI~~G~~p~w~l~vQl~~~~d~~~~~~~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~p 341 (497)
T 1dgf_A 262 FNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEA 341 (497)
T ss_dssp HHHHHTTCCCEEEEEEEEECHHHHHHCSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSSHHHHTTTCCCCTTCCCTTEEE
T ss_pred HHHHHcCCCceEEEEEEeechhhhhcCCCCCCcCceECCcccCCcEEEEEEEecCCCcccccccccccccccccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCC-CCCCCCCCCCCccccc-CCCCCCcccCCCCCCCCCCCCCCCCCccc
Q 044386 321 SNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFM-HRDEEVDYFPSRYDPTRHAERYPIPSDVI 398 (598)
Q Consensus 321 S~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P-~~~v~n~~rDG~m~~~-~~~~~~nY~Pns~~~~~~~~~~~~~~~~v 398 (598)
|+|||||+|++||++||++|+|+||+||||||| +|||+||||||+|++. ++++.|||+|||++++...+.+..++..+
T Consensus 342 S~D~lLq~R~fsY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~~rdG~m~~~~~~~~~~~y~pn~~~~~~~~~~~~~~~~~~ 421 (497)
T 1dgf_A 342 SPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALEHSIQY 421 (497)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTCTTGGGSGGGSCTTSCCCSSCCCCTTCCSCTTTTCCCSSSCSSCCCBCCGGGCCCCEEC
T ss_pred CCChhhhhHHhHHHHHHHHhhcCchhcccccccccccccCccccCccccccCCCCCccccCCCCCCCcCCCCCCCCcccc
Confidence 999999999999999999999999999999999 9999999999999997 56889999999998866556677777788
Q ss_pred ccceeeeeeccCCCcccchhhhc-CCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhcChhhcCchHHHHHHHhC
Q 044386 399 TGRREKACIEKENNFKQPGERYR-SWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQISGSEASFSSQCEAKHLK 476 (598)
Q Consensus 399 ~G~~~r~~~~~~dDf~Qar~fyr-~ls~~EqerLI~Nia~~L~d~~v~~eIqeR~l~~f~kVDpdlg~~~~~rVA~~L~ 476 (598)
+|.+.++.+.++|||+|||+||+ +|++.||+|||+||+++|+ .|+++||+|++++|++||++|| ++||++||
T Consensus 422 ~g~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~i~~~~~~~~~~~d~~~~----~~v~~~~~ 494 (497)
T 1dgf_A 422 SGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLK--DAQIFIQKKAVKNFTEVHPDYG----SHIQALLD 494 (497)
T ss_dssp CSEEEECCCTTSCCSHHHHHHHHHTSCHHHHHHHHHHHHHHHT--TSCHHHHHHHHHHHHHHCHHHH----HHHHHHHH
T ss_pred cCceeeecCCCcchhhhhHHHHHHcCCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHhCHHHH----HHHHHHhc
Confidence 99988887767899999999999 9999999999999999999 6889999999999999999999 99999985
No 9
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=100.00 E-value=2.9e-141 Score=1186.66 Aligned_cols=472 Identities=42% Similarity=0.701 Sum_probs=450.1
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
|||++|+||.+ ++|+|+|.+||+||||++|+|||+||+|||||||++||||+||+|+|++++|++++|+|++|+++||+
T Consensus 24 ~Tt~~G~pv~~-~~s~~~g~~Gp~llqD~~l~eklahFdrErIPeR~vHAKG~gA~G~F~vt~d~s~~t~A~~f~~~Gk~ 102 (688)
T 3ej6_A 24 MTTDFGGNIEE-QFSLKAGGRGSTLLEDFIFRQKLQHFDHERIPERVVHARGAGAHGIFTSYGDWSNITAASFLGAKDKQ 102 (688)
T ss_dssp CBCTTCCBCCC-SSCCEESTTCCBBTTCHHHHHHHHHHHTCCCCCCSSCCSEEEEEEEEEECSBCTTTCCCSTTBSTTCE
T ss_pred cccCCCCCcCC-CcceecCCCCchhHHHHHHHHHHHHhcccCCcccccccCceEEEEEEEECCCchHhhhhHhhcCCCce
Confidence 79999999996 89999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCCh----HHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEY----WRI 156 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~----~~~ 156 (598)
|||++|||+++|++|++|+.||+|||||||||+||||||||||+||||+|||++|++|+|++|++|.|+++++ +++
T Consensus 103 tPv~vRFStv~G~~gs~Dt~rD~RGfAvKFyt~eGn~DlVgnN~PVFFirDp~kFpdfiha~k~~P~t~~~~~~~~~~~~ 182 (688)
T 3ej6_A 103 TPVFVRFSTVAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIRFPDLIHSVKPSPDNEVPQAATAHDSA 182 (688)
T ss_dssp EEEEEEEECSSSCTTCCTTSSSCCEEEEEEEETTEEEEEEEESSSSCSCSSGGGHHHHHHHHSCBTTTTBSTTCCCSHHH
T ss_pred eEEEEEecCCCCCCCCcccCCCCccEEEEEEcCCCCcccccccCCccccCCHHHHHHHHHhhccCCCcCCCChhhhhhHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986 689
Q ss_pred HHHHHhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchh
Q 044386 157 LDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHA 236 (598)
Q Consensus 157 ~dfl~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl 236 (598)
|+|++.|||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.++.+.|+|||
T Consensus 183 wdF~s~~PEs~h~~~~l~sdrg~P~Syr~m~g~g~htf~~vn~~G~~~~VKfh~~p~~G~~~l~-~~EA~~~~g~dpD~l 261 (688)
T 3ej6_A 183 WDFFSSQPSALHTLFWAMSGNGIPRSYRHMDGFGIHTFRLVTEDGKSKLVKWHWKTKQGKAALV-WEEAQVLAGKNADFH 261 (688)
T ss_dssp HHHHHHSGGGHHHHHHHHSGGGSBSCSTTCCEECCSCEEEECTTSCEEEEEEEEEESSCCCBCC-HHHHHHHHHHCTTHH
T ss_pred HHHHHhChhhHHHHHHHhccCCCCCCcccCCcccccceEEEeCCCCEEEEEEEEEECCCCCCCC-HHHHHHhhCCCccHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999888999999
Q ss_pred HHHHHHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCC
Q 044386 237 TQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVP 316 (598)
Q Consensus 237 ~~dL~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvp 316 (598)
++||+++|++|+||+|+|+||||+++|+.+++|||+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|+|+||
T Consensus 262 ~~DL~~~I~~G~~p~w~l~vQv~~~~d~~~~~f~~~D~Tk~WPe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~lvp 341 (688)
T 3ej6_A 262 RQDLWDAIESGNAPSWELAVQLIDEDKAQAYGFDLLDPTKFLPEEFAPLQVLGEMTLNRNPMNYFAETEQISFQPGHIVR 341 (688)
T ss_dssp HHHHHHHHHTTCCCEEEEEEEEECGGGSSCSSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCT
T ss_pred HHHHHHHHhcCCCceEEEEEEEechhhhhhcCCCCCcCCeecCCccCcceEEEEEEEcCCccchhhhhhhcccCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceecCCChhhHhhhhhhHHHhHhhc-CCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccCCCCCC--CCCCCC---
Q 044386 317 GIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDP--TRHAER--- 390 (598)
Q Consensus 317 Gi~pS~DpilqaR~~aY~dS~~~Rl-g~N~~qlPvN~P~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~--~~~~~~--- 390 (598)
||++|+|||||+|+|+|+|||+||| |+||+|||||||+|||+||||||+|++...++.+||+|||+++ +...+.
T Consensus 342 GI~~S~DplLq~R~fsY~dtqr~Rl~G~N~~qlPvN~p~~~~~~~~rDG~m~~~~~~~~~~y~pn~~~~~~~~~~~~~~~ 421 (688)
T 3ej6_A 342 GVDFTEDPLLQGRLYSYLDTQLNRHRGPNFEQLPINRPVSGVHNNHRDGQGQAWIHKNIHHYSPSYLNKGYPAQANQTVG 421 (688)
T ss_dssp TEECCCCHHHHHHHHHHHHHHHHHHSSSCGGGSTTTCCSSCCCSSCCCCTTCCCEECCSCCSSSCTTTTTCSBCCCSSST
T ss_pred CcCCCCChHhhhhhhhhHHHHHhhccCCChhhCCCCCCCCCcCCcCcCCccccccCCCCCCcCCCCCCCCCCccCccccc
Confidence 9999999999999999999999998 9999999999999999999999999876556678999999963 322221
Q ss_pred ---CCCCCcccccceeeeeec-cCCCcccchhhhcCCCHHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHHhcChhhcC
Q 044386 391 ---YPIPSDVITGRREKACIE-KENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRV-THEVRSIWVSYWSQISGSEAS 465 (598)
Q Consensus 391 ---~~~~~~~v~G~~~r~~~~-~~dDf~Qar~fyr~ls~~EqerLI~Nia~~L~d~~v-~~eIqeR~l~~f~kVDpdlg~ 465 (598)
+..+...++|.+.|+.+. .+|||+|||+|||+|++.||+|||+||+++|+ .| +++||+||+++|++||++||
T Consensus 422 ~~~~~~~~~~~~g~~~~~~~~~~~d~~~Q~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~~i~~r~~~~~~~~d~~~~- 498 (688)
T 3ej6_A 422 RGFFTTPGRTASGVLNRELSATFDDHYTQPRLFFNSLTPVEQQFVINAIRFEAS--HVTNEQVKKNVLEQLNKISNDVA- 498 (688)
T ss_dssp TCCCCCTTCEEEEEEESSCCGGGCCCSHHHHHHHHTSCHHHHHHHHHHHHHHHT--TCCCHHHHHHHHHHHHHHCHHHH-
T ss_pred CccccCCCceeecceEeccCcCCcchhHHHHHHHHhCCHHHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHhCHHHH-
Confidence 334556789999887764 57899999999999999999999999999999 57 68999999999999999999
Q ss_pred chHHHHHHHhCCCcc
Q 044386 466 FSSQCEAKHLKVSLE 480 (598)
Q Consensus 466 ~~~~rVA~~L~~~~~ 480 (598)
++||++||+.++
T Consensus 499 ---~~va~~l~~~~~ 510 (688)
T 3ej6_A 499 ---KRVAVALGLEAP 510 (688)
T ss_dssp ---HHHHHHHTSCCC
T ss_pred ---HHHHHHhCCCCC
Confidence 999999998765
No 10
>1a4e_A Catalase A; oxidoreductase, peroxidase; HET: HEM; 2.40A {Saccharomyces cerevisiae} SCOP: e.5.1.1
Probab=100.00 E-value=3.6e-141 Score=1151.00 Aligned_cols=468 Identities=37% Similarity=0.615 Sum_probs=450.4
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
|||++|+||.++++|+|+|++||+||||++|+|||+||+|||||+|++||||+||+|+|++++|++++|+|++|+++||+
T Consensus 8 ~tt~~G~pv~~~~~s~t~G~~Gp~ll~D~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~~Gk~ 87 (488)
T 1a4e_A 8 VTNSTGNPINEPFVTQRIGEHGPLLLQDYNLIDSLAHFNRENIPQRNPHAHGSGAFGYFEVTDDITDICGSAMFSKIGKR 87 (488)
T ss_dssp CBCTTSCBCSSSSCEEEETTTSCBBTTCHHHHHHHHHHTTCCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSSTTCE
T ss_pred cccCCCCccCCCccceecCCCCCcccccHHHHHHHHhhcCCCCCccccCCCceEEEEEEEECCCchHhhhchhccCCCce
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFC 160 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl 160 (598)
|||++|||+++|++|++|+.||+|||||||||+||||||||||+||||++||++|++|+|++|++|.|++++++++|+|+
T Consensus 88 tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlV~nN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~wdf~ 167 (488)
T 1a4e_A 88 TKCLTRFSTVGGDKGSADTVRDPRGFATKFYTEEGNLDWVYNNTPVFFIRDPSKFPHFIHTQKRNPQTNLRDADMFWDFL 167 (488)
T ss_dssp EEEEEEEECSSSCTTCCSSSSSCCEEEEEEEETTEEEEEEEESSSSCSCSCTTHHHHHHHHHSCCTTTCSCCHHHHHHHH
T ss_pred eeEEEEeecCCCCCCCCCccCCcCceEEEEecCCCccceeeecCCccccCCHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hh--CchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHH
Q 044386 161 SH--LPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQ 238 (598)
Q Consensus 161 ~~--~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~ 238 (598)
+. +||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.++++.++||+++
T Consensus 168 s~~~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VKfh~~P~~Gv~~L~-~~ea~~~~g~d~d~~~~ 246 (488)
T 1a4e_A 168 TTPENQVAIHQVMILFSDRGTPANYRSMHGYSGHTYKWSNKNGDWHYVQVHIKTDQGIKNLT-IEEATKIAGSNPDYCQQ 246 (488)
T ss_dssp TSGGGGGGHHHHHHHHSGGGSBSCGGGCCEECCSCEEEECTTSCEEEEEEEEEESSCCCBCC-HHHHHHHHHHCTTHHHH
T ss_pred hccCChHHhhHHHHhhccCCCCCCccccccccccceEEEcCCCCEEEEEEEEEECCCCCCCC-HHHHHHhcCCChhHHHH
Confidence 99 9999999999999999999999999999999999999999999999999999999999 99999988889999999
Q ss_pred HHHHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCce
Q 044386 239 DLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGI 318 (598)
Q Consensus 239 dL~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi 318 (598)
||+++|++|++|+|+|+||||+++|+.+++|||+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|||+||||
T Consensus 247 dL~~~I~~g~~p~w~l~vQl~~~~d~~~~~f~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI 326 (488)
T 1a4e_A 247 DLFEAIQNGNYPSWTVYIQTMTERDAKKLPFSVFDLTKVWPQGQFPLRRVGKIVLNENPLNFFAQVEQAAFAPSTTVPYQ 326 (488)
T ss_dssp HHHHHHHTTCCCEEEEEEEEECHHHHHTSSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTE
T ss_pred HHHHHHHcCCCCeEEEEEEeecHHHHhcCCCCCCCCCCcCCcccCCceEEEEEEecCCCcchhhhhhhHhcCcccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCC--CCCCCCCCccccc-CCCCCCcccCCCCC---CCCCCCCCC
Q 044386 319 YYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCP--HRNNHYDGFMNFM-HRDEEVDYFPSRYD---PTRHAERYP 392 (598)
Q Consensus 319 ~pS~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~--v~n~~rDG~m~~~-~~~~~~nY~Pns~~---~~~~~~~~~ 392 (598)
+||+|||||+|++||++||++|+|+||+|||||||+|| ++||||||+|++. ++++.|||+|||++ ++...+.+.
T Consensus 327 ~pS~D~lLq~R~faY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~~~rdG~m~~~~~~~~~~~y~pn~~~~~~~~~~~~~~~ 406 (488)
T 1a4e_A 327 EASADPVLQARLFSYADAHRYRLGPNFHQIPVNCPYASKFFNPAIRDGPMNVNGNFGSEPTYLANDKSYTYIQQDRPIQQ 406 (488)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHTCTTGGGSGGGSCTTSCCCCTTSCCCTTCCSCTTTTCCSSCCTTSCCBCCCTTCCSST
T ss_pred CCCCChHHHHHHHHHHHHHHHhcccccccCCcCCCCCcccccChhhccccccccCCCCCcccccCccCCCCCCccCCCCc
Confidence 99999999999999999999999999999999999999 9999999999997 56899999999997 344444454
Q ss_pred CCCcccccceeeeeec---cCCCcccchhhhcCC--CHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhcChhhcCch
Q 044386 393 IPSDVITGRREKACIE---KENNFKQPGERYRSW--APDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQISGSEASFS 467 (598)
Q Consensus 393 ~~~~~v~G~~~r~~~~---~~dDf~Qar~fyr~l--s~~EqerLI~Nia~~L~d~~v~~eIqeR~l~~f~kVDpdlg~~~ 467 (598)
..+ .++|.+.++... ++|||+|||+||++| ++.||+|||+||+++|+ .|+++||+|++++|++||++||
T Consensus 407 ~~~-~~~g~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~i~~~~~~~~~~~d~~~~--- 480 (488)
T 1a4e_A 407 HQE-VWNGPAIPYHWATSPGDVDFVQARNLYRVLGKQPGQQKNLAYNIGIHVE--GACPQIQQRVYDMFARVDKGLS--- 480 (488)
T ss_dssp TSC-CEEECEEEECCCCCSSSHHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHT--TSCHHHHHHHHHHHHTTCHHHH---
T ss_pred CCC-CccccEEEeecccCCCcchhhhHHHHHHhcCCCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHhCHHHH---
Confidence 422 458988888764 678999999999999 99999999999999999 6899999999999999999999
Q ss_pred HHHHHHHhC
Q 044386 468 SQCEAKHLK 476 (598)
Q Consensus 468 ~~rVA~~L~ 476 (598)
++||++|+
T Consensus 481 -~~v~~~l~ 488 (488)
T 1a4e_A 481 -EAIKKVAE 488 (488)
T ss_dssp -HHHHHHHC
T ss_pred -HHHHHhhC
Confidence 99999985
No 11
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=100.00 E-value=6.8e-140 Score=1178.61 Aligned_cols=472 Identities=40% Similarity=0.689 Sum_probs=451.4
Q ss_pred CCCCCCccccCCCCccccCCCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCce
Q 044386 1 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQ 80 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~ 80 (598)
|||++|+|| ++++|+|+|.+||+||||++|+|||+||+|||||+|++||||+||+|+|++++|++++|+|+||+++||+
T Consensus 16 ~tt~~G~pv-~~~~s~~~g~~Gp~ll~D~~l~ekl~hFdreripeR~vHAKG~ga~G~F~vt~d~~~~t~A~~F~~~Gk~ 94 (688)
T 2iuf_A 16 LTSNVGGPI-QDENSLSAGQRGATLLQDFIFREKIQRFDHERVPERAVHARGTGAHGTFTSYGDWSNLTAASFLSAEGKE 94 (688)
T ss_dssp CBCTTSCBC-CCSSCCEESTTCCBCTTCHHHHHHHHHHHTCCCCCCSSCCSEEEEEEEEEESSCCTTTCCCGGGSSTTCE
T ss_pred eecCCCccc-CCccccccCCCCChhhhHHHHHHHHhhcccCCCccccccCCcceeEEEEEECCCchHhhhhhhhcCCCce
Confidence 699999999 9999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCCh----HHH
Q 044386 81 TPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEY----WRI 156 (598)
Q Consensus 81 tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~----~~~ 156 (598)
|||++|||+++|++|++|+.||+|||||||||+||||||||||+||||+|||++|++|+|++|++|.|+++++ +++
T Consensus 95 tPv~vRFStv~G~~gs~Dt~rd~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~kFpd~i~a~k~~P~t~~~~~~~a~~~~ 174 (688)
T 2iuf_A 95 TPMFTRFSTVAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKPRGDNQIPQAATAHDSA 174 (688)
T ss_dssp EEEEEEEECSSCCTTCCTTSSCCCEEEEEEEETTEEEEEEEESSSSCSCSCGGGHHHHHHHHSCCTTTCCSTTCCCSHHH
T ss_pred EEEEEEccCCCCCCCCCcccCCcCceEEEEecCCCCcceeeecCCccccCCHHHHHHHHHHhCCCCCCCCCchhhhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999994 799
Q ss_pred HHHHHhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchh
Q 044386 157 LDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHA 236 (598)
Q Consensus 157 ~dfl~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl 236 (598)
|+|++.+||++|+++|+|+++++|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.++.+.|+|||
T Consensus 175 ~df~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VKfh~~P~~G~~~L~-~~ea~~~~g~dpd~l 253 (688)
T 2iuf_A 175 WDFFSQQPSVLHTLLWAXAGHGIPRSFRHVNGFGVHTFRLVTDDGKTKLVKFHWKGLQGKASFV-WEEAQQTAGKNADFX 253 (688)
T ss_dssp HHHHHHSGGGHHHHHHHHTGGGSBSCGGGCCEEEEEEEEEECTTCCEEEEEEEEEESSCCCBCC-HHHHHHHHHHCTTHH
T ss_pred HHHHHhCcchHHHHHHHccCCCCCCCcccCCcccccceEEEccCCCEEEEEEEEEeCCCcCCCC-HHHHHHhcCCCcchh
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999998888899999
Q ss_pred HHHHHHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCC
Q 044386 237 TQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVP 316 (598)
Q Consensus 237 ~~dL~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvp 316 (598)
++||+++|++|+||+|+|+||||+++|+++|+|+|+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|||+||
T Consensus 254 ~~dL~~~I~~g~~p~w~l~vQl~~~~d~~~~~~~~~D~Tk~WPe~~~P~~~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vp 333 (688)
T 2iuf_A 254 RQDLFQSIQAGRFPEWELGVQIMQEQDQLKFGFDLLDPTKIVPEELVPVTILGKMQLNRNPXNYFAETEQVMFQPGHIVR 333 (688)
T ss_dssp HHHHHHHHHTTCCCEEEEEEEEECGGGTTTTSSCTTCTTCCCCTTTSCEEEEEEEEEEECCSSHHHHTTTCCCCTTCCCT
T ss_pred hHHHHHHHhcCCCceEEEEEEEechHHhhcCCCCCCcCCccCCcccCCceEEEEEEEcCCccchhhhhhhhcccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceecCCChhhHhhhhhhHHHhHhhcC-CCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccCCCCCC--CCCCC----
Q 044386 317 GIYYSNDKMLQCRIFAYGDTQRHRLG-PNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDP--TRHAE---- 389 (598)
Q Consensus 317 Gi~pS~DpilqaR~~aY~dS~~~Rlg-~N~~qlPvN~P~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~--~~~~~---- 389 (598)
||+||+|||||+|+++|+|||++|+| +||+|||||||+|||+||||||+|++.++++.|||+|||+++ +...+
T Consensus 334 GI~~S~DplLq~R~fsY~ds~r~Rlgg~N~~qlPvN~P~~~~~~~~rdG~m~~~~~~~~~~y~pns~~~~~~~~~~~~~~ 413 (688)
T 2iuf_A 334 GVDFTEDPLLQGRLFSYLDTQLNRHGGPNFEQLPINRPRAPIHNNNRDGAGQMFIPLDPNAYSPNTENKGSPKQANETVG 413 (688)
T ss_dssp TEECCCCHHHHHHHHHHHHHHHHHHSSSCGGGSTTTCCSSCCCCSCCCCTTCCCCCCCSCCCSSCSTTTTCSCCCCSSST
T ss_pred CcCCCCChHHHhHHhHHHHHHHHhccCCcccccccCCCCCccCCccccccccccCCCCCCccccCcCCCCCccccccccC
Confidence 99999999999999999999999995 999999999999999999999999998888899999999975 22222
Q ss_pred -CCCCCCccc-ccceeeeeecc-CCCcccchhhhcCCCHHHHHHHHHHHHHHcCCCCCC-HHHHHHHHHHHHhcChhhcC
Q 044386 390 -RYPIPSDVI-TGRREKACIEK-ENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVT-HEVRSIWVSYWSQISGSEAS 465 (598)
Q Consensus 390 -~~~~~~~~v-~G~~~r~~~~~-~dDf~Qar~fyr~ls~~EqerLI~Nia~~L~d~~v~-~eIqeR~l~~f~kVDpdlg~ 465 (598)
.+..++..+ +|.+.|+.+.+ +|||+|||+|||+|++.||+|||+||+++|+ .|. ++||+||+++|++||++||
T Consensus 414 ~~~~~~~~~~~~g~~~~~~~~~~~d~~~q~~~~~~~~~~~~~~~l~~~~~~~l~--~~~~~~i~~~~~~~~~~~d~~~~- 490 (688)
T 2iuf_A 414 KGFFTAPERTASGKLQRTLSTTFENNWSQPRLFWNSLVNAQKEFIVDAXRFETS--NVSSSVVRDDVIIQLNRISDNLA- 490 (688)
T ss_dssp TCCCCCTTCCCCSCEEECCCGGGCCCSHHHHHHHHTSCHHHHHHHHHC-CHHHH--TCCCHHHHHHHHHHHHHHCHHHH-
T ss_pred CCcccCccccccCceEEeccccccchhhhHHHHHHcCCHHHHHHHHHhcchhhc--CCCcHHHHHHHHHHHHHhCHHHH-
Confidence 444555666 89888877653 7999999999999999999999999999999 675 8999999999999999999
Q ss_pred chHHHHHHHhCCCcc
Q 044386 466 FSSQCEAKHLKVSLE 480 (598)
Q Consensus 466 ~~~~rVA~~L~~~~~ 480 (598)
++||++||++++
T Consensus 491 ---~~v~~~l~~~~p 502 (688)
T 2iuf_A 491 ---TRVASAIGVEAP 502 (688)
T ss_dssp ---HHHHTTTTCCCC
T ss_pred ---HHHHHHhCCCCC
Confidence 999999998765
No 12
>2xq1_A Peroxisomal catalase; oxidoreductase, hydrogen peroxide detoxification, PTS1; HET: HEM; 2.90A {Pichia angusta}
Probab=100.00 E-value=8.5e-140 Score=1143.74 Aligned_cols=470 Identities=38% Similarity=0.646 Sum_probs=450.1
Q ss_pred CCCCCCccccCCCCccccC----------CCCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhh
Q 044386 1 MTTNAGAPVWNDNHSLTVG----------SRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTC 70 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g----------~~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~ 70 (598)
|||++|+||.++++|+|+| .+||+||||++|+|||+||+|||||+|++||||+||+|+|++++|++++|+
T Consensus 9 ~tt~~G~pv~~~~~s~~~g~~~~~~~~~~~~Gp~ll~D~~l~ekl~~f~reripeR~vHAKG~ga~G~F~vt~dis~~t~ 88 (509)
T 2xq1_A 9 FTTSQGCPVSDPFTTQRIPLDSTGYKYAPPIGPLLLQDFKLIDTLSHFDRERIPERVVHAKGAGAYGVFEVTDDITDVCS 88 (509)
T ss_dssp CBCTTCCBCSCTTCEEECCBCCTTCSSCCCCCCBBTTCHHHHHHHHHHTTCCCCCCSSCCSEEEEEEEEEECSCCTTTCC
T ss_pred cccCCCcccCCCccceecccccccccccCCCCCcccccHHHHHHHHhhcCCCCCCccccCCcceeEEEEEECCchhHhhh
Confidence 6999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCC
Q 044386 71 ADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHI 150 (598)
Q Consensus 71 a~lF~~~Gk~tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~ 150 (598)
|++|+++||+|||+||||+++|++|++|+.||+|||||||||+||||||||||+||||++||++|++|+|++|++|.|++
T Consensus 89 A~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~kFpd~iha~k~~p~t~~ 168 (509)
T 2xq1_A 89 AKFLDTVGKKTRIFTRFSTVGGEKGSADTARDPRGFATKFYTEDGNLDLVYNNTPIFFIRDPIKFPHFIHTQKRNPATNL 168 (509)
T ss_dssp CGGGSSTTCEEEEEEEEECSSCCTTSCTTSSSCCEEEEEEEETTEEEEEEEESSSCCSCSSGGGHHHHHHHHSBCTTTCS
T ss_pred chhccCCCceeeEEEEeecCCCCCCCCCcCCCcCceEEEEecCCCceeeeecCCCccccCCHHHHHHHHHHhCCCCccCC
Confidence 99999899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcC
Q 044386 151 QEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGG 230 (598)
Q Consensus 151 ~d~~~~~dfl~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~ 230 (598)
+|++++|+|++.+||++|+++|+|+++|+|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.++++
T Consensus 169 ~d~~~~~df~s~~Pes~h~~~~l~sdrg~P~syr~m~g~g~htf~~vn~~G~~~~VKfh~~P~~Gv~~L~-~~ea~~~~g 247 (509)
T 2xq1_A 169 KDPNMFWDYLTANDESLHQVMYLFSNRGTPASYRTMNGYSGHTYKWYNSKGEWVYVQVHFIANQGVHNLL-DEEAGRLAG 247 (509)
T ss_dssp BCHHHHHHHHHHSGGGHHHHHHHHSGGGSBSCSTTCCEECCSCEEEECTTSCEEEEEEEEEETTCCCBCC-HHHHHHHHH
T ss_pred CCHHHHHHHHHhChhhhhhHHHhhccCCCCCChhhccCccccceeeecCCCCEEEEEEEEEeCCCCCCCC-HHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 999999888
Q ss_pred CCCchhHHHHHHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhcccccee
Q 044386 231 SNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFN 310 (598)
Q Consensus 231 ~d~dyl~~dL~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~ 310 (598)
.++||+++||+++|++|++|+|+|+||||+++|+.+++|||+|+||+|||+++|+++||+|+||+|++|+|++|||++|+
T Consensus 248 ~d~d~~~~DL~~~I~~g~~p~w~l~VQl~~~~d~~~~~f~~~D~Tk~WPe~~~P~i~VG~L~Lnrnp~n~fae~EqlaF~ 327 (509)
T 2xq1_A 248 EDPDHSTRDLWEAIEKGDYPSWECYIQTMTLEQSKKLPFSVFDLTKVWPHKDFPLRHFGRFTLNENPKNYYAETEQIAFS 327 (509)
T ss_dssp HCTTHHHHHHHHHHHHTCCCEEEEEEEEECHHHHTTCSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCC
T ss_pred CChhHHHHHHHHHHHcCCCceEEEEEEeecHHHHhcCCCCCCcCcccCCcccCCceEeEEEEECCCccchhhhhhhhhcC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCceecCCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCC--CCCCCCCCccccc-CCCCCCcccCCCCCCC--
Q 044386 311 PGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCP--HRNNHYDGFMNFM-HRDEEVDYFPSRYDPT-- 385 (598)
Q Consensus 311 P~~lvpGi~pS~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~--v~n~~rDG~m~~~-~~~~~~nY~Pns~~~~-- 385 (598)
|||+||||+||+|||||+|+++|++||++|+|+||+|||||||+|+ ++||||||+|++. ++++.|||+|||+++.
T Consensus 328 P~~~vpGI~pS~D~lLq~R~faY~ds~r~Rlg~N~~qlPvN~P~~~~~~~~~~rdG~m~~~~~~~~~~~y~pn~~~~~~~ 407 (509)
T 2xq1_A 328 PSHTVPGMEPSNDPVLQSRLFSYPDTHRHRLGPNYHQIPVNCPLKSGSFNPINRDGPMCVDGNLGGTPNYANAYNCPIQY 407 (509)
T ss_dssp TTCCCTTEEECSCHHHHHHHHHHHHHHHHHTCTTGGGSGGGSCCSSCCCCTTCCCCTTCCSCTTTTCCSSTTCTTCCCBC
T ss_pred ccccCCCcCCCCChHHHHHHHHHHHHHHHhhccccccCCccCCCCccccCCcccccccccccCCCCcccccccccCCCCC
Confidence 9999999999999999999999999999999999999999999999 9999999999997 5689999999999863
Q ss_pred --CCCCC--CCCCCcccccceeeeeec-cCCCcccchhhhcCC--CHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHh
Q 044386 386 --RHAER--YPIPSDVITGRREKACIE-KENNFKQPGERYRSW--APDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQ 458 (598)
Q Consensus 386 --~~~~~--~~~~~~~v~G~~~r~~~~-~~dDf~Qar~fyr~l--s~~EqerLI~Nia~~L~d~~v~~eIqeR~l~~f~k 458 (598)
...+. +..+ .++|.+.++... ++|||+|||+||++| ++.||+|||+||+++|+ .|+++||+|++++|++
T Consensus 408 ~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~l~~n~~~~l~--~~~~~i~~~~~~~~~~ 483 (509)
T 2xq1_A 408 AVSPKASGNKPDE--KYTGEVVPYHWEHTDYDYFQPKMFWKVLGRTPGEQESLVKNVANHVS--AADEFIQDRVYEYFSK 483 (509)
T ss_dssp CCC------CCCC--CEEECCEEECCCCCGGGGHHHHHHHHHTTSSTTHHHHHHHHHHHHHT--TSCHHHHHHHHHHHTT
T ss_pred CCcCCCcCCcCCC--CcccceEeecCCCCcchhhhHHHHHHhcCCCHHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHH
Confidence 33233 4443 458888888764 678999999999999 99999999999999999 6889999999999999
Q ss_pred cChhhcCchHHHHHHHhCCCc
Q 044386 459 ISGSEASFSSQCEAKHLKVSL 479 (598)
Q Consensus 459 VDpdlg~~~~~rVA~~L~~~~ 479 (598)
||++|| ++||++|++++
T Consensus 484 ~d~~~~----~~v~~~~~~~~ 500 (509)
T 2xq1_A 484 AEPIIG----DLIRKKVQELK 500 (509)
T ss_dssp TCHHHH----HHHHHHHHHHH
T ss_pred hCHHHH----HHHHHHhCCCC
Confidence 999999 99999997543
No 13
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=100.00 E-value=1e-133 Score=1139.86 Aligned_cols=473 Identities=43% Similarity=0.705 Sum_probs=452.7
Q ss_pred CCCCCCccccCCCCccccCC---CCCcccchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCC
Q 044386 1 MTTNAGAPVWNDNHSLTVGS---RGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAP 77 (598)
Q Consensus 1 ~t~~~G~p~~~~~~s~~~g~---~gp~ll~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~ 77 (598)
|||++|+||.++++|+|+|. +||+||||++|+|||+||+|||||+|++||||+||+|+|++++|++++|+|++|+++
T Consensus 20 ~t~~~g~p~~~~~~s~~~g~~~~~gp~ll~d~~~~ek~~hf~reripeR~vHAKG~ga~G~F~v~~d~~~~t~a~~f~~~ 99 (715)
T 1sy7_A 20 LTTDYGVKQTTADDWLRIVSDDKIGPSLLEDPFARERIMRFDHERIPERVVHARGSGAFGKFKVYESASDLTMAPVLTDT 99 (715)
T ss_dssp CBCTTSCBCSCSSCCCEEECSSCEEEECTTCHHHHHHHHHHHTCCCCCCSSSCSEEEEEEEEEESSCCTTTCCCGGGTCS
T ss_pred cccCCCcccCCCCceeccCCCCCCCchhHHHHHHHHHHhhhccCCCCccccCCCceeEEEEEEECCCchHhhhchhhcCC
Confidence 69999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeEEEEecCCCCCCCCCCCCCCCCceeEEEEeccCceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCCh----
Q 044386 78 GVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEY---- 153 (598)
Q Consensus 78 Gk~tPv~vRFS~~~g~~g~~D~~rd~RG~AIKf~~~eGn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~---- 153 (598)
||+|||++|||+++|++|++|+.||+|||||||||+||||||||||+||||++||++|++|+|++|++|.|+++++
T Consensus 100 Gk~tpv~vRFStv~g~~gs~D~~rd~RGfAvKf~t~eGn~Dlv~nN~PvFfird~~~F~~~i~a~k~~p~t~~~~~~~~~ 179 (715)
T 1sy7_A 100 SRETPVFVRFSTVLGSRGSADTVRDVRGFAVKFYTEEGNWDLVGNNIPVFFIQDAIKFPDVIHAGKPEPHNEVPQAQSAH 179 (715)
T ss_dssp SCCEEEEEEEECSSSCTTSCTTSSSCCEEEEEEEETTEEEEEEEESSSSCSCSSGGGHHHHHHHHSCBTTTTBCTTCCCS
T ss_pred CceEEEEEEeccCCCCCCCCcccCCcCceeEEEecCCCCcceeeeCCCccccCCHHHHHHHHHHcCCCCccCCCCcccch
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HHHHHHHHhCchhHhHHHHhhcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCC
Q 044386 154 WRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNH 233 (598)
Q Consensus 154 ~~~~dfl~~~Pes~~~~~~l~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~ 233 (598)
+++|+|++.+||++|+++|+|+++++|.||++|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||.++.+.++
T Consensus 180 ~~~~df~~~~Pes~h~~~~~~sdr~~p~s~r~m~~~g~htf~~vn~~G~~~~vk~~~~p~~g~~~l~-~~ea~~~~g~~~ 258 (715)
T 1sy7_A 180 NNFWDFQFNHTEATHMFTWAMSDRAIPRSLRMMQGFGVNTYTLINAQGKRHFVKFHWTPELGVHSLV-WDEALKLAGQDP 258 (715)
T ss_dssp HHHHHHHHHCGGGHHHHHHHTSGGGSBSCGGGSCEECCSCEEEECTTSCEEEEEEEEEETTCCCBCC-HHHHHHHHHHCT
T ss_pred hHHHHHHhhCchhHHHHHHhccCCCCCcccccccccccCCceeEcCCCcEEEEEeeEEcCCCCcCCC-HHHHHHhhCCCc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999 999999988899
Q ss_pred chhHHHHHHHHHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceeccc
Q 044386 234 SHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGI 313 (598)
Q Consensus 234 dyl~~dL~~~I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~ 313 (598)
|||++||+++|++|+||+|+|+||||+++|+++|+|||+|+||+|||+++|+++||+|+||+|++|+|++|||++|+|+|
T Consensus 259 d~l~~dL~~~i~~g~~p~w~l~vQ~~~~~d~~~~~~~~~D~Tk~Wp~~~~P~~~vG~l~Ln~n~~n~f~e~eq~aF~P~~ 338 (715)
T 1sy7_A 259 DFHRKDLWEAIENGAYPKWKFGIQAIAEEDEHKFDFDILDATKIWPEDLVPVRYIGEMELNRNPDEFFPQTEQIAFCTSH 338 (715)
T ss_dssp THHHHHHHHHHHTTCCCEEEEEEEEEEGGGTTCSSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTC
T ss_pred cHHHHHHHHHHhcCCCceEEEEEEeeChHHhccCCCCCCcCCccCCccCCCceEeEEEEEcCCcccchhhhhhhhcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceecCCChhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccCCCCCCCCC---C-C
Q 044386 314 VVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRH---A-E 389 (598)
Q Consensus 314 lvpGi~pS~DpilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~v~n~~rDG~m~~~~~~~~~nY~Pns~~~~~~---~-~ 389 (598)
+||||++|+|||||+|+|+|+|||++|+|+||+|||||||+|+++||||||+|++.++++.|||+||+...... . .
T Consensus 339 ~vpGI~~S~DplLq~R~fsY~ds~~~Rlg~n~~~lpvn~P~~~~~~~~rdg~~~~~~~~~~~~y~pn~~~~~~~~~~~~~ 418 (715)
T 1sy7_A 339 VVNGIGFSDDPLLQGRNFSYFDTQISRLGVNFQELPINRPVCPVMNFNRDGAMRHTISRGTVNYYPNRFDACPPASLKEG 418 (715)
T ss_dssp CCTTEECCCCTTHHHHHHHHHHTHHHHTCTTGGGSTTTCCSSCCCCCCCCCTTCCCCCCSSCCSSSCTTCCSCCCCTTTT
T ss_pred cCCCcCCCCChHHHHHhHHHHHHHhhhcCCChhhccccCCCccccccchhhhhccccCCCCcccccCCCcccCccccccC
Confidence 99999999999999999999999999999999999999999999999999999998888899999996421111 1 1
Q ss_pred CCCCCCcccccceeeeeecc-CCCcccchhhhcCCCHHHHHHHHHHHHHHcCCCCCC-HHHHHHHHHHHHhcChhhcCch
Q 044386 390 RYPIPSDVITGRREKACIEK-ENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVT-HEVRSIWVSYWSQISGSEASFS 467 (598)
Q Consensus 390 ~~~~~~~~v~G~~~r~~~~~-~dDf~Qar~fyr~ls~~EqerLI~Nia~~L~d~~v~-~eIqeR~l~~f~kVDpdlg~~~ 467 (598)
.|..++..++|.+.|+.+.+ +|||+|||+|||+|++.||+|||+||+++|+ +|. ++||+|++++|++||++||
T Consensus 419 ~~~~~~~~~~g~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~i~~~~~~~~~~~d~~~~--- 493 (715)
T 1sy7_A 419 GYLEYAQKVAGIKARARSAKFKEHFSQAQLFYNSMSPIEKQHMINAFGFELD--HCEDPVVYGRMVQRLADIDLGLA--- 493 (715)
T ss_dssp CCCCCCCCCCSCCCSCCCGGGGCCSHHHHHHHHHSCHHHHHHHHHHHHHHHH--TCCCHHHHHHHHHHHTTTCHHHH---
T ss_pred CccCCCccccccEEEeccCCccchhhhHHHHHHcCCHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHHhcCHHHH---
Confidence 45566678899988877654 6999999999999999999999999999999 675 8999999999999999999
Q ss_pred HHHHHHHhCCCcc
Q 044386 468 SQCEAKHLKVSLE 480 (598)
Q Consensus 468 ~~rVA~~L~~~~~ 480 (598)
++||++||++++
T Consensus 494 -~~v~~~~~~~~p 505 (715)
T 1sy7_A 494 -QTIAEMVGGEAP 505 (715)
T ss_dssp -HHHHHHHCSCCC
T ss_pred -HHHHHHhCCCCC
Confidence 999999997664
No 14
>3e4w_A Putative uncharacterized protein; heme enzyme, catalase, peroxidase, oxidoreductase; HET: HEM; 1.80A {Mycobacterium avium subsp} PDB: 3e4y_A*
Probab=100.00 E-value=8e-95 Score=755.11 Aligned_cols=301 Identities=22% Similarity=0.385 Sum_probs=291.9
Q ss_pred cchHHHHHHhhccCCCCCCcccCCCCceeeEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCCCCCCc
Q 044386 26 LEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRG 105 (598)
Q Consensus 26 l~d~~l~e~l~~f~re~~~eR~vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~tPv~vRFS~~~g~~g~~D~~rd~RG 105 (598)
|+|.+|||+|++|+||++++|++||||+||+|+|++++|++++|+|++|+ ||+|||+||||+++|++|++|+.||+||
T Consensus 12 ~~~~~lid~l~~~~~e~~~~R~vHAKG~~a~G~F~v~~d~~~~t~a~~f~--g~~tpv~vRFSt~~g~~g~~D~~rd~RG 89 (320)
T 3e4w_A 12 LTPDQAIDAIRGTGGAQPGCRALHAKGTLYRGTFTATRDAVMLSAAPHLD--GSTVPALIRFSNGSGNPKQRDGAPGVRG 89 (320)
T ss_dssp CCHHHHHHHHHHTTCCCTTSCSSSCSEEEEEEEEEECTTGGGTCCCGGGS--SCEEEEEEEEEESSSCTTCCTTSSCCEE
T ss_pred CCHHHHHHHHHHhcCCCCCCccCCCCeeeEEEEEEECCCchHHHhccccC--CceeEEEEEeccCCCCCCCCccCCCCCc
Confidence 79999999999999999999999999999999999999999999999995 8999999999999999999999999999
Q ss_pred eeEEEEeccCc-eeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHhHHHHhhcCCCCCCCcC
Q 044386 106 FAVKFYTREGN-WDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYR 184 (598)
Q Consensus 106 ~AIKf~~~eGn-~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl~~~Pes~~~~~~l~s~rg~P~Sy~ 184 (598)
||||||++||+ |||||||+||||++||++|++|+|++|++ +++|+++|+|++.+||++|+++|+|+++++|.||+
T Consensus 90 fAvKf~t~eG~~~Dlv~nN~PvFfird~~~F~~~i~a~k~~----~~d~~~~~df~~~~Pes~h~~~~l~s~rg~p~s~~ 165 (320)
T 3e4w_A 90 MAVKFTLPDGSTTDVSAQTARLLVSSTPEGFIDLLKAMRPG----LTTPLRLATHLLTHPRLLGALPLLREANRIPASYA 165 (320)
T ss_dssp EEEEEECTTSCEEEEEEESCSSCSCSSHHHHHHHHHHTSSS----TTHHHHHHHHHHHCHHHHTTHHHHHHHTCEESCGG
T ss_pred eEEEEEcCCCCeEeeeeccccceecCCHHHHhHHHHhhCCC----CCCHHHHHHHHHhCHhHHHHHHHHhccCCCCCCcc
Confidence 99999999996 99999999999999999999999999976 78999999999999999999999999999999999
Q ss_pred CCCCccccceEeEecCCCEEEEEEEEEeCCCCCcCCCHHHHHHhcCCCCchhHHHHHHHHHcCCCceEEEEEEEeCCCcc
Q 044386 185 HMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHE 264 (598)
Q Consensus 185 ~~~y~s~htf~~~n~~G~~~~VK~~~~P~~G~~~l~~~~ea~~l~~~d~dyl~~dL~~~I~~g~~~~w~l~vQl~~~~d~ 264 (598)
+|+|||+|||+|+|++|+.+||||||+|.+|+++|+ ++||. +.++|||++||+++|++|++ +|+|+||||+++|.
T Consensus 166 ~~~~~s~htf~~~n~~G~~~~vK~~~~p~~g~~~l~-~~ea~---~~~pd~l~~dL~~~i~~g~~-~w~l~vQ~~~~~d~ 240 (320)
T 3e4w_A 166 TTEYHGLHAFRWIAADGSARFVRYHLVPTAAEEYLS-ASDAR---GKDPDFLTDELAARLQDGPV-RFDFRVQIAGPTDS 240 (320)
T ss_dssp GSCEEEEEEEEEECTTSCEEEEEEEEEESSCCCEEC-HHHHH---TSCTTHHHHHHHHHHHHSCE-EEEEEEEECCTTCC
T ss_pred cCCccccccEEEEcCCCCEEEEEEEEEeCCCCCCCC-HHHhc---cCCccHHHHHHHHHHHhCCc-cEEEEEEecCCCCc
Confidence 999999999999999999999999999999999999 88875 46899999999999999995 99999999998774
Q ss_pred CCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceecCCChhhHhhhhhhHHHhHhhcCCC
Q 044386 265 DQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPN 344 (598)
Q Consensus 265 ~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~pS~DpilqaR~~aY~dS~~~Rlg~N 344 (598)
|+|+||+|||+ |+++||+|+||+|++|+|++|||++|+|||+||||+||+|||||+|+++|++|+++|+|.|
T Consensus 241 ------~~D~Tk~Wpe~--P~~~VG~l~Ln~n~~n~f~e~Eq~aF~P~~~vpGi~ps~D~llq~R~~aY~ds~r~Rlg~n 312 (320)
T 3e4w_A 241 ------TVDPSSAWQST--QIVTVGTVTITGPDTEREHGGDIVVFDPMRVTDGIEPSDDPVLRFRTLVYSASVKLRTGVD 312 (320)
T ss_dssp ------SSCTTSCCCCC--CEEEEEEEEEEEECCSSSSTTCCCCCCTTCCCTTEEECSCHHHHHHHHHHHHHHHHHHSCC
T ss_pred ------CCCCCCccCCC--CCEEeEEEEECCCCccchhcccceeeeccccCCccCCCCChHHHhHhHHHHHHHHhhcCCC
Confidence 78999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q 044386 345 Y 345 (598)
Q Consensus 345 ~ 345 (598)
-
T Consensus 313 ~ 313 (320)
T 3e4w_A 313 R 313 (320)
T ss_dssp C
T ss_pred C
Confidence 4
No 15
>1u5u_A Allene oxide synthase-lipoxygenase protein; catalase, heme, eicosanoid, fusion PR lyase; HET: HEM; 2.00A {Plexaura homomalla} SCOP: e.5.1.2
Probab=100.00 E-value=7e-82 Score=669.44 Aligned_cols=301 Identities=18% Similarity=0.245 Sum_probs=275.8
Q ss_pred CCcccchHHHHHHhhccCCCCCCc-cc-CCCCceeeEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCC
Q 044386 22 GPVLLEDYHLVEKLAHFARERIPE-RV-VHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPET 99 (598)
Q Consensus 22 gp~ll~d~~l~e~l~~f~re~~~e-R~-vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~tPv~vRFS~~~g~~g~~D~ 99 (598)
|-.|.+|.+|+|+|++|++ ++|+ |+ +||||+||+|+|++++| +++|+|++|+ +|++|||++||||+ |++|+
T Consensus 39 ~~~l~~~~~lv~~l~~~~~-~~p~~R~~vHAKG~ga~G~F~v~~d-~~~t~a~~F~-~gk~tpv~vRFSt~----gs~D~ 111 (374)
T 1u5u_A 39 GLKLKLKKEKFKTLFTLGT-TLKGFRRATHTVGTGGIGEITIVND-PKFPEHEFFT-AGRTFPARLRHANL----KYPDD 111 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHTTTSCSSSCSEEEEEEEEEECSS-CCSCCCSSSC-TTCEEEEEEEEEBS----SCSCT
T ss_pred cceeccHHHHHHHHHHhcC-CCCCccccCCCCeeeEEEEEEECCC-chhhcccccC-CCCeeeEEEEecCC----CCCCC
Confidence 5578899999999999999 7888 99 99999999999999999 9999999996 69999999999998 67888
Q ss_pred C-CCCCceeEEEEec--cCceeeeccC---CCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHhHHHHh
Q 044386 100 L-RDPRGFAVKFYTR--EGNWDLLGNS---IPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWF 173 (598)
Q Consensus 100 ~-rd~RG~AIKf~~~--eGn~DlV~nN---~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl~~~Pes~~~~~~l 173 (598)
. +|+||||||||++ +|+||||||| +||||++|+++| + ++++ |+++|+|++.+||++|++ +
T Consensus 112 ~~rd~RGfAvKf~t~d~~g~~Dlv~nNg~~~PvFfird~~~F---i-a~k~--------p~~~~df~~~~Pes~~~~--l 177 (374)
T 1u5u_A 112 AGADARSFSIKFADSDSDGPLDIVMNTGEANIFWNSPSLEDF---V-PVEE--------GDAAEEYVYKNPYYYYNL--V 177 (374)
T ss_dssp TSEECBEEEEESSSSSSCCSCEEEEEESSSCSCCSHHHHHHH---T-TCCT--------THHHHHHHTTCHHHHHHH--H
T ss_pred CCCCCCeEEEEEEecCCCCceEEEeecCCcccceecCCHHHH---H-hcCC--------hHHHHHHHhhCHHHHHHH--H
Confidence 7 9999999999999 8899999999 999999999999 3 6654 589999999999999986 7
Q ss_pred hcCCCCCCCcCCCCCccccceEeEecCCCEEEEEEEEEeC-----CCCC--cCCCHHHHH--------HhcCCCCchhHH
Q 044386 174 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPT-----CGVK--CLIDDEEAV--------KVGGSNHSHATQ 238 (598)
Q Consensus 174 ~s~rg~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~-----~G~~--~l~~~~ea~--------~l~~~d~dyl~~ 238 (598)
+++|++|.||++|+|||+|||+|+|++|+.+||||||+|. +|++ +|+ .+|+. ++.+.++|||++
T Consensus 178 ~s~r~~P~s~~~~~y~s~htf~~vn~~G~~~~vK~~~~P~~~~~~~g~~~~~l~-~ee~~~~~~~~r~~~~~~~~d~l~~ 256 (374)
T 1u5u_A 178 EALRRAPDTFAHLYYYSQVTMPFKAKDGKVRYCRYRALPGDVDIKEEDESGRLT-EEEQRKIWIFSRHENEKRPDDYLRK 256 (374)
T ss_dssp HHCEESCSCGGGCCEECCSCEEEECTTCCEEEEEEEEEESSSCCCGGGCTTCCC-HHHHTTTTCCSCCTTCCSCTTHHHH
T ss_pred hCcCCCCCCcccCCccccceEEEECCCCCEEEEEEEEEeCCcccccCcccCCCC-HHHHhhccccccccccCCCccHHHH
Confidence 8999999999999999999999999999999999999999 7875 888 87765 356789999999
Q ss_pred HHHHHHHcCCCceEEEEEEEeC--CCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCC
Q 044386 239 DLYDSIAAGNYPEWKLYIQTID--PDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVP 316 (598)
Q Consensus 239 dL~~~I~~g~~~~w~l~vQl~~--~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvp 316 (598)
||+++|++|+ |+|+|+||||+ ++|+ +||+|+||+|||+++|+++||+|+||+|+++. +|||++|+|||++|
T Consensus 257 dL~~~I~~g~-~~w~l~vQl~~~~~~d~----~~~~D~Tk~Wpe~~~P~i~VG~l~Ln~~~p~~--e~EqlaF~P~~~vp 329 (374)
T 1u5u_A 257 EYVERLQKGP-VNYRLQIQIHEASPDDT----ATIFHAGILWDKETHPWFDLAKVSIKTPLSPD--VLEKTAFNIANQPA 329 (374)
T ss_dssp HHHHHHHHSC-EEEEEEEEEEECCTTCC----GGGGCTTSCCCTTTSCCEEEEEEEEEEECCHH--HHHHCCCCTTCCCT
T ss_pred HHHHHHHcCC-ceEEEEEEEecCCcccc----cCcccCceeCCcccCCcEEEEEEEECCCCCch--hhhHhhcCccccCC
Confidence 9999999999 89999999999 6655 46999999999999999999999999996553 79999999999999
Q ss_pred ceec---C--CC--hhhHhhhhhhHHHhHhhcCCCCCCCCCC
Q 044386 317 GIYY---S--ND--KMLQCRIFAYGDTQRHRLGPNYLMLPVN 351 (598)
Q Consensus 317 Gi~p---S--~D--pilqaR~~aY~dS~~~Rlg~N~~qlPvN 351 (598)
||++ | +| ||||+|+++|++||++|+|.|+.|||.-
T Consensus 330 Gi~~s~pSs~~D~~~llq~R~~aY~ds~~~R~g~n~~~~~~~ 371 (374)
T 1u5u_A 330 SLGLLEAKSPEDYNSIGELRVAVYTWVQHLRKLKIGSLVPAG 371 (374)
T ss_dssp TSCCCCCSSSSSTTHHHHHHHHHHHHHHHHHHHTTTCCC---
T ss_pred CccccccccCCCcchHHHHHHHHHHHHHHhhcccchhccCCc
Confidence 9954 4 99 9999999999999999999999999864
No 16
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}
Probab=100.00 E-value=4.4e-73 Score=665.45 Aligned_cols=312 Identities=16% Similarity=0.193 Sum_probs=280.5
Q ss_pred CCcccchHHHHHHhhccCCCCCCccc-CCCCceeeEEEEEECCCCchhhhcccCCCCCceeeEEEEecCCCCCCCCCCCC
Q 044386 22 GPVLLEDYHLVEKLAHFARERIPERV-VHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETL 100 (598)
Q Consensus 22 gp~ll~d~~l~e~l~~f~re~~~eR~-vHAKG~ga~G~F~v~~d~~~~t~a~lF~~~Gk~tPv~vRFS~~~g~~g~~D~~ 100 (598)
|.++.++.++++.+.++.+.+++.|+ +||||+||+|+|+|++|+ ++|+|++|+. ||+|||++||||++| .+|+.
T Consensus 39 ~~~l~~~~~~~~~~~~~~g~~~g~Rr~vHAKG~ga~G~F~v~~d~-~~t~a~~F~~-gk~tpv~vRFStv~~---~Dd~~ 113 (1066)
T 3dy5_A 39 GLKLKLKKEKFKTLFTLGTTLKGFRRATHTVGTGGIGEITIVNDP-KFPEHEFFTA-GRTFPARLRHANLKY---PDDAG 113 (1066)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSSCSSSCSBCCEEEEEEECSSC-CSCCCSSSCT-TCCEEEEEECBBSSC---SCTTS
T ss_pred chhHHHHHHHHhhhhhhcCCCCCccccccCCeeeEEEEEEECCCH-HHHhhhhhcC-CCEEEEEEEcCCCCC---CCCCC
Confidence 57899999999999999999999885 999999999999999999 9999999985 999999999999854 34457
Q ss_pred CCCCceeEEEEecc--CceeeeccCCCcccccChHHHHHHHHHhCCCCCCCCCChHHHHHHHHhCchhHhHHHHhhcCCC
Q 044386 101 RDPRGFAVKFYTRE--GNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVG 178 (598)
Q Consensus 101 rd~RG~AIKf~~~e--Gn~DlV~nN~PVFfirdp~~F~~fi~a~k~~P~t~~~d~~~~~dfl~~~Pes~~~~~~l~s~rg 178 (598)
||+|||||||||+| |||||||||+||||+|||++|++|+|++++ +++|+|++.|||+ +++|+++++|
T Consensus 114 rd~RGfAvKf~t~e~Ggn~DlV~nN~PvFfird~~~F~~fi~a~kp---------~~~~df~~~~Pes--~~~~l~sdr~ 182 (1066)
T 3dy5_A 114 ADARSFSIKFADSDSDGPLDIVMNTGEANIFWNSPSLEDFVPVEEG---------DAAEEYVYKNPYY--YYNLVEALRR 182 (1066)
T ss_dssp CCBBEEEEESSSSSSCCSCEEEEESSSSCSCCSHHHHHTTTTCCTT---------HHHHHHHTSSHHH--HHTHHHHBCS
T ss_pred CCCceEEEEEEeCCCCceeeeeeccCCccccCCHHHHHHHHHhcCc---------hHHHHHHhhCcHH--HHHHHhccCC
Confidence 99999999999999 599999999999999999999999999962 6899999999999 7899999999
Q ss_pred CCCCcCCCCCccccceEeEecCCCEEEEEEEEEeC------CCCC-cCCCHHHHH--------HhcCCCCchhHHHHHHH
Q 044386 179 IPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPT------CGVK-CLIDDEEAV--------KVGGSNHSHATQDLYDS 243 (598)
Q Consensus 179 ~P~Sy~~~~y~s~htf~~~n~~G~~~~VK~~~~P~------~G~~-~l~~~~ea~--------~l~~~d~dyl~~dL~~~ 243 (598)
+|+||++|+|||+|||+|+|++|+.+||||||+|. +|++ +|+ .+||. ++.+.++|||++||+++
T Consensus 183 ~P~s~~~m~~~s~htf~~~n~~G~~~~VKf~~~P~~~~~~~~G~~~~l~-~ee~~~~~~~~r~~~~~~~pd~l~~dL~~~ 261 (1066)
T 3dy5_A 183 APDTFAHLYYYSQVTMPFKAKDGKVRYCRYRALPGDVDIKEEDESGRLT-EEEQRKIWIFSRHENEKRPDDYLRKEYVER 261 (1066)
T ss_dssp SCSCGGGCCEECCSCEEEECTTCCEEEEEEEEEECSSCCCGGGCTTCCC-HHHHHTCSCCSCCSSCCCCTTTTTTTTTTT
T ss_pred CCCCcccCCcccccceEEEcCCCCEEEEEEEEEECCccccccccccCCC-HHHHhhccccccccccCCCccHHHHHHHHH
Confidence 99999999999999999999999999999999994 5788 788 87765 46788999999999999
Q ss_pred HHcCCCceEEEEEEEeCCCccCCCCCCCCCCccccCCCCcCcEeeEEEEeCCCCCchhhhccccceecccCCCceecCCC
Q 044386 244 IAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSND 323 (598)
Q Consensus 244 I~~g~~~~w~l~vQl~~~~d~~~~~~di~D~Tk~Wpe~~~P~i~VG~L~L~~~~~n~f~e~EqlaF~P~~lvpGi~pS~D 323 (598)
|++|+ |+|+|+||||++++.+ ++||+|+||+|||+++|+++||+|+||+|++| ++|||++|+|||+||||++|+|
T Consensus 262 i~~g~-p~w~l~vQl~~~~~~d--~~d~~D~Tk~Wp~~~~P~i~VG~l~Lnrn~~n--ae~Eq~aF~P~~~vpGi~~s~d 336 (1066)
T 3dy5_A 262 LQKGP-VNYRLQIQIHEASPDD--TATIFHAGILWDKETHPWFDLAKVSIKTPLSP--DVLEKTAFNIANQPASLGLLEA 336 (1066)
T ss_dssp TTSSC-EEEEEEEEEEECCTTC--CGGGGCTTSCCCGGGSCCEEEEEEEEEEECCH--HHHTTCCCCTTCCCTTSCCCCC
T ss_pred HHcCC-ceEEEEEEEecCCcCC--CCCCCCCCeECCcccCceEEEEEEEECCCCCc--chhhhhccCccccCCCccCCCc
Confidence 99999 9999999999844444 35689999999999999999999999999998 7899999999999999999964
Q ss_pred -------hhhHhhhhhhHHHhHhhcCCCCCCCCCCCCCCC
Q 044386 324 -------KMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCP 356 (598)
Q Consensus 324 -------pilqaR~~aY~dS~~~Rlg~N~~qlPvN~P~~~ 356 (598)
+|+++|+.+|+.|+++|+..+- .||...+.+.
T Consensus 337 ks~~plgsI~raR~~vY~~s~~~R~~~~g-~l~~~~~~~~ 375 (1066)
T 3dy5_A 337 KSPEDYNSIGELRVAVYTWVQHLRKLKIG-SLVPAGQNAI 375 (1066)
T ss_dssp SSTTSTTHHHHHHHHHHHHHHHHHHHTSS-CC-----CCE
T ss_pred cccCCccHHHHHHHHHHHHHHHhhhcccc-cCCcccCcee
Confidence 4999999999999999986663 5666555553
No 17
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=20.92 E-value=62 Score=26.85 Aligned_cols=52 Identities=10% Similarity=0.075 Sum_probs=37.6
Q ss_pred HcCCCCCCHHHHHHHHHHHHhcChhhcCchHHHHHHHhCCCc-chhhh-hhhhhhhh
Q 044386 438 ALCDPRVTHEVRSIWVSYWSQISGSEASFSSQCEAKHLKVSL-ELEHW-MLLTCQER 492 (598)
Q Consensus 438 ~L~d~~v~~eIqeR~l~~f~kVDpdlg~~~~~rVA~~L~~~~-~~~~~-~~~~~~er 492 (598)
+|+||+.-.+..+++|+.+..+..-+. ...||+.+|++. ++.+. ..|.++++
T Consensus 10 ~~~~~~~~~d~eekVLe~LkeaG~Plk---ageIae~~GvdKKeVdKaik~LKkEgk 63 (80)
T 2lnb_A 10 HMADPGREGHLEQRILQVLTEAGSPVK---LAQLVKECQAPKRELNQVLYRMKKELK 63 (80)
T ss_dssp CSCCSCHHHHHHHHHHHHHHHHTSCEE---HHHHHHHHTSCHHHHHHHHHHHHHTTS
T ss_pred cccCCcccchHHHHHHHHHHHcCCCCC---HHHHHHHHCCCHHHHHHHHHHHHHcCC
Confidence 566665556899999999999977665 478999999987 44444 44555444
Done!