Your job contains 1 sequence.
>044388
MGTELMRVCIKEENDEVPSVPPGFESFASFTLKRVQDTEKHDCDITSCSASASASESLSV
HMETEVKVADAAKAARPLRRRPGINYGLLDHSSEDESDSGKLGQNFTARPCLPKGVIRGC
PTCSDCQKVTARWRPEDSCRPDLEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVP
PSSWKPPCPLKEKPIWDSSTFVTRVQRVDKLQNRNSMRKVSRIHNHSRRKRRRSTRMAVD
CGSDSGNVSASGDVGCYEDERFGFEPGPAFTLNTFQKYADLFKAQYFSRDKNDAKGLGAN
TAVLEEHWEPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDE
RYIKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMH
WGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCV
QNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKL
LLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSS
QTMKMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNFCSCAWGSKFFLYR
YDTSELNILVEALEGKLSAVYRWARLDLGLALSSFISRDNMDFDKLSHSMDGPVLKM
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044388
(717 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2025635 - symbol:PKDM7D species:3702 "Arabidop... 2455 5.2e-255 1
TAIR|locus:2196979 - symbol:JMJ18 "Jumonji domain-contain... 1710 4.6e-176 1
TAIR|locus:2128659 - symbol:JMJ14 "JUMONJI 14" species:37... 1696 1.4e-174 1
TAIR|locus:2044697 - symbol:MEE27 "maternal effect embryo... 1585 8.1e-163 1
TAIR|locus:2064910 - symbol:AT2G38950 species:3702 "Arabi... 1035 6.4e-136 3
ZFIN|ZDB-GENE-030131-5379 - symbol:kdm5ba "lysine (K)-spe... 740 2.0e-95 3
UNIPROTKB|Q5F3R2 - symbol:KDM5B "Lysine-specific demethyl... 741 2.2e-94 3
MGI|MGI:1922855 - symbol:Kdm5b "lysine (K)-specific demet... 734 5.4e-94 3
UNIPROTKB|Q9UGL1 - symbol:KDM5B "Lysine-specific demethyl... 734 5.4e-94 3
RGD|1565602 - symbol:Kdm5b "lysine (K)-specific demethyla... 734 5.4e-94 3
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 730 6.2e-93 3
UNIPROTKB|F1NRC4 - symbol:KDM5B "Lysine-specific demethyl... 741 2.0e-92 3
UNIPROTKB|F1NUR9 - symbol:KDM5B "Lysine-specific demethyl... 741 2.1e-92 3
ZFIN|ZDB-GENE-030424-1 - symbol:kdm5bb "lysine (K)-specif... 726 3.1e-92 3
FB|FBgn0031759 - symbol:lid "little imaginal discs" speci... 702 1.4e-91 3
RGD|1305429 - symbol:Kdm5a "lysine (K)-specific demethyla... 736 5.8e-86 2
UNIPROTKB|E9PSW7 - symbol:Jarid1a "Protein Jarid1a" speci... 736 5.8e-86 2
UNIPROTKB|B4E1Y0 - symbol:KDM5D "Lysine-specific demethyl... 712 2.4e-85 2
UNIPROTKB|Q30DN6 - symbol:KDM5D "Lysine-specific demethyl... 736 5.0e-85 2
UNIPROTKB|F1MQ59 - symbol:KDM5A "Uncharacterized protein"... 737 8.0e-85 2
MGI|MGI:2136980 - symbol:Kdm5a "lysine (K)-specific demet... 741 9.9e-85 2
UNIPROTKB|F1Q4J4 - symbol:KDM5A "Uncharacterized protein"... 736 1.3e-84 2
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 733 1.8e-84 3
UNIPROTKB|F5H1F7 - symbol:KDM5A "Lysine-specific demethyl... 734 1.8e-84 2
UNIPROTKB|P29375 - symbol:KDM5A "Lysine-specific demethyl... 734 2.1e-84 2
UNIPROTKB|E9PSM3 - symbol:Jarid1a "Protein Jarid1a" speci... 736 2.7e-84 2
UNIPROTKB|E2R0S2 - symbol:KDM5C "Lysine-specific demethyl... 727 5.4e-84 2
UNIPROTKB|Q38JA7 - symbol:KDM5C "Lysine-specific demethyl... 727 6.1e-84 2
UNIPROTKB|F1PJS3 - symbol:KDM5B "Uncharacterized protein"... 734 9.1e-84 3
UNIPROTKB|D4A3B4 - symbol:D4A3B4 "Uncharacterized protein... 724 1.3e-83 2
MGI|MGI:99781 - symbol:Kdm5c "lysine (K)-specific demethy... 722 2.1e-83 2
UNIPROTKB|F1MYV2 - symbol:KDM5C "Uncharacterized protein"... 722 2.1e-83 2
UNIPROTKB|B0QZ44 - symbol:KDM5C "Smcy homolog, X-linked (... 722 2.1e-83 2
UNIPROTKB|P41229 - symbol:KDM5C "Lysine-specific demethyl... 722 2.1e-83 2
UNIPROTKB|K7GNM7 - symbol:KDM5C "Lysine-specific demethyl... 722 2.1e-83 2
UNIPROTKB|F1RUI7 - symbol:KDM5C "Lysine-specific demethyl... 722 2.3e-83 2
UNIPROTKB|F1NN75 - symbol:KDM5A "Uncharacterized protein"... 740 3.0e-83 2
UNIPROTKB|Q9BY66 - symbol:KDM5D "Lysine-specific demethyl... 712 7.0e-83 2
UNIPROTKB|E9PFH2 - symbol:KDM5D "Lysine-specific demethyl... 712 7.1e-83 2
UNIPROTKB|A1YVX4 - symbol:KDM5C "Lysine-specific demethyl... 717 8.1e-83 2
ZFIN|ZDB-GENE-060810-94 - symbol:kdm5c "lysine (K)-specif... 716 1.0e-82 2
MGI|MGI:99780 - symbol:Kdm5d "lysine (K)-specific demethy... 703 1.2e-82 3
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 734 1.5e-82 2
ASPGD|ASPL0000010243 - symbol:AN8211 species:162425 "Emer... 704 8.6e-82 2
UNIPROTKB|G4N2P7 - symbol:MGG_04878 "Lid2 complex compone... 701 5.2e-81 2
DICTYBASE|DDB_G0268778 - symbol:rbbB "putative Retinoblas... 619 1.5e-79 4
POMBASE|SPAC1002.05c - symbol:jmj2 "histone demethylase J... 534 1.6e-72 3
TAIR|locus:2031290 - symbol:AT1G63490 species:3702 "Arabi... 733 5.7e-72 1
UNIPROTKB|E7EV89 - symbol:KDM5A "Lysine-specific demethyl... 616 7.7e-70 2
UNIPROTKB|I3L8V3 - symbol:KDM5A "Uncharacterized protein"... 705 1.4e-69 1
CGD|CAL0000662 - symbol:orf19.5651 species:5476 "Candida ... 554 1.4e-62 2
WB|WBGene00004319 - symbol:rbr-2 species:6239 "Caenorhabd... 644 7.6e-62 1
UNIPROTKB|Q23541 - symbol:rbr-2 "Lysine-specific demethyl... 644 7.6e-62 1
ZFIN|ZDB-GENE-060503-246 - symbol:jarid2b "jumonji, AT ri... 434 5.1e-51 3
UNIPROTKB|F1MH56 - symbol:JARID2 "Uncharacterized protein... 415 4.0e-49 2
UNIPROTKB|F1RUJ7 - symbol:JARID2 "Uncharacterized protein... 413 6.7e-49 2
UNIPROTKB|F1P6D5 - symbol:JARID2 "Uncharacterized protein... 418 1.2e-48 2
UNIPROTKB|J9NWC2 - symbol:JARID2 "Uncharacterized protein... 418 1.3e-48 2
UNIPROTKB|F1NWZ0 - symbol:JARID2 "Protein Jumonji" specie... 420 1.7e-48 2
UNIPROTKB|Q5F363 - symbol:JARID2 "Protein Jumonji" specie... 420 1.8e-48 2
SGD|S000003880 - symbol:JHD2 "JmjC domain family histone ... 445 2.7e-48 2
MGI|MGI:104813 - symbol:Jarid2 "jumonji, AT rich interact... 415 3.4e-48 2
UNIPROTKB|Q92833 - symbol:JARID2 "Protein Jumonji" specie... 410 3.6e-47 2
ZFIN|ZDB-GENE-061218-1 - symbol:jarid2a "jumonji, AT rich... 388 2.5e-43 3
TAIR|locus:2146653 - symbol:ELF6 "EARLY FLOWERING 6" spec... 405 5.3e-41 2
TAIR|locus:504955644 - symbol:REF6 "relative of early flo... 384 3.0e-38 2
RGD|1591045 - symbol:Kdm4d "lysine (K)-specific demethyla... 363 3.8e-37 2
MGI|MGI:3606484 - symbol:Kdm4d "lysine (K)-specific demet... 362 6.1e-37 2
FB|FBgn0036004 - symbol:Jarid2 "Jumonji, AT rich interact... 340 1.6e-36 2
UNIPROTKB|Q6B0I6 - symbol:KDM4D "Lysine-specific demethyl... 355 2.4e-36 2
UNIPROTKB|B2RXH2 - symbol:KDM4E "Lysine-specific demethyl... 355 5.8e-36 2
RGD|1307528 - symbol:Kdm4c "lysine (K)-specific demethyla... 352 6.1e-35 4
MGI|MGI:1924054 - symbol:Kdm4c "lysine (K)-specific demet... 352 6.2e-35 4
FB|FBgn0053182 - symbol:Kdm4B "Histone demethylase 4B" sp... 355 7.0e-35 2
UNIPROTKB|Q9H3R0 - symbol:KDM4C "Lysine-specific demethyl... 352 7.9e-35 4
ZFIN|ZDB-GENE-030131-6279 - symbol:kdm4ab "lysine (K)-spe... 354 8.7e-35 3
ZFIN|ZDB-GENE-070705-160 - symbol:si:ch211-262l3.1 "si:ch... 354 8.7e-35 3
UNIPROTKB|F1SMN9 - symbol:F1SMN9 "Uncharacterized protein... 352 1.0e-34 4
UNIPROTKB|E1BX38 - symbol:Gga.52669 "Uncharacterized prot... 360 6.0e-34 2
UNIPROTKB|E1C6D5 - symbol:KDM4A "Uncharacterized protein"... 356 9.3e-34 3
UNIPROTKB|O75164 - symbol:KDM4A "Lysine-specific demethyl... 346 1.8e-33 2
UNIPROTKB|Q5RD88 - symbol:KDM4A "Lysine-specific demethyl... 346 1.8e-33 2
UNIPROTKB|E1BPL5 - symbol:KDM4A "Uncharacterized protein"... 346 1.8e-33 2
UNIPROTKB|F1PHR7 - symbol:KDM4C "Uncharacterized protein"... 352 2.0e-33 3
UNIPROTKB|E1BA41 - symbol:KDM4B "Uncharacterized protein"... 349 2.0e-33 2
MGI|MGI:2446210 - symbol:Kdm4a "lysine (K)-specific demet... 345 2.4e-33 2
MGI|MGI:2442355 - symbol:Kdm4b "lysine (K)-specific demet... 352 3.6e-33 2
UNIPROTKB|E2RFE0 - symbol:KDM4A "Uncharacterized protein"... 346 3.8e-33 2
UNIPROTKB|F5GX28 - symbol:KDM4B "Lysine-specific demethyl... 346 4.6e-33 2
UNIPROTKB|O94953 - symbol:KDM4B "Lysine-specific demethyl... 344 7.0e-33 2
UNIPROTKB|E2R243 - symbol:KDM4B "Uncharacterized protein"... 344 7.9e-33 2
ZFIN|ZDB-GENE-120215-3 - symbol:si:ch211-215f22.3 "si:ch2... 348 1.2e-32 2
ZFIN|ZDB-GENE-070209-38 - symbol:zgc:153957 "zgc:153957" ... 353 4.1e-32 2
SGD|S000000971 - symbol:RPH1 "JmjC domain-containing hist... 337 8.5e-32 2
ZFIN|ZDB-GENE-060503-664 - symbol:kdm4b "lysine (K)-speci... 341 1.1e-31 3
FB|FBgn0033233 - symbol:Kdm4A "Histone demethylase 4A" sp... 330 6.1e-31 2
ASPGD|ASPL0000057825 - symbol:AN1060 species:162425 "Emer... 356 5.3e-30 2
UNIPROTKB|F1N9S1 - symbol:F1N9S1 "Uncharacterized protein... 342 2.2e-29 3
CGD|CAL0004209 - symbol:orf19.2730 species:5476 "Candida ... 305 9.6e-29 3
UNIPROTKB|Q5AF79 - symbol:RPH2 "Potential jumonji-like tr... 305 9.6e-29 3
WARNING: Descriptions of 20 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2025635 [details] [associations]
symbol:PKDM7D species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045492
"xylan biosynthetic process" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026 KO:K11446 EMBL:AB493442
IPI:IPI00545403 RefSeq:NP_001184940.1 RefSeq:NP_172338.4
UniGene:At.26858 ProteinModelPortal:C0SUT9 PaxDb:C0SUT9
PRIDE:C0SUT9 EnsemblPlants:AT1G08620.1 EnsemblPlants:AT1G08620.2
GeneID:837384 KEGG:ath:AT1G08620 TAIR:At1g08620 OMA:GMNELET
PhylomeDB:C0SUT9 ProtClustDB:CLSN2722602 Genevestigator:C0SUT9
Uniprot:C0SUT9
Length = 1209
Score = 2455 (869.3 bits), Expect = 5.2e-255, P = 5.2e-255
Identities = 463/713 (64%), Positives = 535/713 (75%)
Query: 1 MGTELMRVCIKEENDEVPSVPPGFESFASFTLKRVQDTEKHDCDITXXXXXXXXXXXXXV 60
MGTELMR+C+KE++D++PSVPPGFES+A+FTLKRV D T +
Sbjct: 1 MGTELMRICVKEDSDDLPSVPPGFESYATFTLKRVVPATTSDKAKTPAIESVSATEQAKM 60
Query: 61 HMETEVKVXXXXXXXXXXXXXPGINYGLLDHXXXXXXXXGKLG-----QNFTARPCLPKG 115
+E++ P IN+ D QN +P LPKG
Sbjct: 61 EVESD-----EAKAARALRRRPWINHSGCDDDGDCAANNDNAASQNPDQNCDVKPALPKG 115
Query: 116 VIRGCPTCSDCQKVTARWRPEDSCRPDLEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGI 175
V+RGC C DCQKVTARW P+++ RPDLEDAPVFYP+EEEF+DTL YIA IRP+AE YGI
Sbjct: 116 VVRGCEECKDCQKVTARWHPDEARRPDLEDAPVFYPSEEEFEDTLNYIAKIRPEAEKYGI 175
Query: 176 CRIVPPSSWKPPCPLKEKPIWDSSTFVTRVQRVDKLQNRNSMRKVXXXXXXXXXXXXXXX 235
CRIVPP SWKPPCPLKEK +W+ S F TRVQRVDKLQNR+SM+K+
Sbjct: 176 CRIVPPPSWKPPCPLKEKQVWEGSKFTTRVQRVDKLQNRSSMKKISKLPNQMRKKKRKCM 235
Query: 236 XMAVDCGSDSGNVSASGDVGCYEDERFGFEPGPAFTLNTFQKYADLFKAQYFSRDKN--D 293
M +D ++ S G E E FGFEPGP FTL FQKYAD FKAQYF + + D
Sbjct: 236 KMGMDSVTNGMGDPCSASTGMNELETFGFEPGPGFTLKDFQKYADEFKAQYFKKSETSTD 295
Query: 294 AKGLGANTAVLEEHWEPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPK-TLN 352
K N+ + WEP +E++EGEYWRIV+KATEEIEVLYGADLET VFGSGFPK + +
Sbjct: 296 DKCKVDNSI---DCWEPALEDVEGEYWRIVDKATEEIEVLYGADLETGVFGSGFPKISSS 352
Query: 353 QVGSASDERYIKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHH 412
S+S+++Y KSGWNLNNFPRLPGS+L YE DISGVLVPWLYIGMCFSSFCWHVEDHH
Sbjct: 353 HNASSSEDKYAKSGWNLNNFPRLPGSLLKYEGSDISGVLVPWLYIGMCFSSFCWHVEDHH 412
Query: 413 LYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSE 472
LYSLNYMHWGAPK+WYGV GKDA+KLEEAMRKHL DLFEEQPDLLHKLVTQLSPS LK+
Sbjct: 413 LYSLNYMHWGAPKLWYGVGGKDAVKLEEAMRKHLPDLFEEQPDLLHKLVTQLSPSKLKTA 472
Query: 473 GLPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRK 532
G+PV+RCVQ+AGEFVLTFPRAYH+GFN GFNCAEAVNVAPVDWLPHGQIAIELY +QGRK
Sbjct: 473 GVPVHRCVQHAGEFVLTFPRAYHAGFNSGFNCAEAVNVAPVDWLPHGQIAIELYCQQGRK 532
Query: 533 TSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERAR 592
TSISHDKLLLGAARE V+A WELNLL+KNT DNLRWK F KDGILAK LK R+DMER R
Sbjct: 533 TSISHDKLLLGAAREVVKADWELNLLRKNTVDNLRWKAFSAKDGILAKTLKARIDMERTR 592
Query: 593 REFLSSSSQTMKMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNFCSCAW 652
REFL +SS +KM SNFDAT+EREC +C FDLHLSA GC CS ++Y+CL H K CSC W
Sbjct: 593 REFLCNSSLALKMHSNFDATNERECCICFFDLHLSAAGCRCSPEKYSCLTHVKELCSCPW 652
Query: 653 GSKFFLYRYDTSELNILVEALEGKLSAVYRWARLDLGLALSSFISRDNMDFDK 705
+K+FL+RYD ELN+LVEA+EGKLS+VYRWAR DLGLALS+ +S M+ D+
Sbjct: 653 VTKYFLFRYDIDELNVLVEAVEGKLSSVYRWARQDLGLALSTDVSGSKMEIDE 705
>TAIR|locus:2196979 [details] [associations]
symbol:JMJ18 "Jumonji domain-containing protein 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 GO:GO:0048573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0032453 KO:K11446
IPI:IPI00545873 RefSeq:NP_001185118.1 RefSeq:NP_174367.6
UniGene:At.27326 UniGene:At.74914 ProteinModelPortal:F4I6G4
SMR:F4I6G4 PRIDE:F4I6G4 EnsemblPlants:AT1G30810.1
EnsemblPlants:AT1G30810.2 GeneID:839963 KEGG:ath:AT1G30810
OMA:NCERECF Uniprot:F4I6G4
Length = 819
Score = 1710 (607.0 bits), Expect = 4.6e-176, P = 4.6e-176
Identities = 336/580 (57%), Positives = 402/580 (69%)
Query: 114 KGVIRGCPTCSDCQKVTARWRPEDSCRPDLEDAPVFYPTEEEFQDTLKYIASIRPKAEPY 173
K I P+ +KV ARW P+++ RP + DAPVF P+ EEF D L YI IRP AEPY
Sbjct: 27 KDTIMEQPSSPRHRKVVARWLPDEAQRPIINDAPVFTPSLEEFVDPLAYIEKIRPLAEPY 86
Query: 174 GICRIVPPSSWKPPCPLKEKPIWDSSTFVTRVQRVDKLQNRNSMRKVXXXXXXXXXXXXX 233
GICRI+PPS+WKPPC LKEK IW+ + F TR+Q VD LQNR M+K
Sbjct: 87 GICRIIPPSTWKPPCRLKEKSIWEQTKFPTRIQTVDLLQNREPMKKKPKSRKRKRRRNSR 146
Query: 234 XXXMAVDCGSDSGNVSASGDVGCYEDERFGFEPGPAFTLNTFQKYADLFKAQYFSRDKND 293
GS ++S + +E+FGF G FTL+ F+KYA FK YF +K D
Sbjct: 147 MGSSKRRSGSSPAESTSSPEA----EEKFGFNSGSDFTLDEFEKYALHFKDSYF--EKKD 200
Query: 294 AKGLGANTAVLEEHWEPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQ 353
+ G +++ W P V++IEGEYWRIVE+ T+E+EV YGADLE V GSGF K +
Sbjct: 201 SGG-----DIVK--WTPSVDDIEGEYWRIVEQPTDEVEVYYGADLENGVLGSGFYKRAEK 253
Query: 354 VGSASDERYIKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHL 413
+ E+Y SGWNLNN PRLPGSVLS+E DISGVLVPWLY+GMCFSSFCWHVEDHHL
Sbjct: 254 FTGSDMEQYTLSGWNLNNLPRLPGSVLSFEDCDISGVLVPWLYVGMCFSSFCWHVEDHHL 313
Query: 414 YSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEG 473
YSLNY H+G PK+WYGVPG +A LE+AMRKHL DLFEEQPDLLH LVTQ SPSILK EG
Sbjct: 314 YSLNYHHFGEPKVWYGVPGSNATALEKAMRKHLPDLFEEQPDLLHGLVTQFSPSILKDEG 373
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKT 533
+ YR VQN+GE+VLTFPRAYH+GFNCGFNCAEAVNVAPVDWL HGQ A+ELY ++ RKT
Sbjct: 374 VQAYRVVQNSGEYVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLAHGQNAVELYSKETRKT 433
Query: 534 SISHDKLLLGAAREAVRAHWELNLL--KKNTSDNLRWKDFCGKDGILAKALKKRVDMERA 591
S+SHDKLLLGAA EAV+A WEL+ K+NT+ NLRWK FCGK+G L A++ R+ ME
Sbjct: 434 SLSHDKLLLGAAYEAVKALWELSASEGKENTT-NLRWKSFCGKNGTLTNAIQARLQMEEG 492
Query: 592 RREFLSSSSQTMK-MESNFDATSERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNFCSC 650
R L S ++K ME +FD+ EREC C +DLHLSA GC CS + YACL HA + CSC
Sbjct: 493 RITALGRDSSSLKKMEKDFDSNCERECFSCFYDLHLSASGCKCSPEEYACLKHADDLCSC 552
Query: 651 AWGSKFFLYRYDTSELNILVEALEGKLSAVYRWARLDLGL 690
F L RY EL+ LV ALEG+ + WA LG+
Sbjct: 553 DVKDGFILLRYTMDELSSLVRALEGESDDLKIWASKVLGI 592
>TAIR|locus:2128659 [details] [associations]
symbol:JMJ14 "JUMONJI 14" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
[GO:0009910 "negative regulation of flower development"
evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005654 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0009910 GO:GO:0048573
EMBL:AL161553 EMBL:AL080253 GO:GO:0010216 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 EMBL:BT002486 EMBL:BT010548 IPI:IPI00516310
IPI:IPI00656704 PIR:T10582 RefSeq:NP_001031681.1 RefSeq:NP_193773.2
UniGene:At.43482 ProteinModelPortal:Q8GUI6 SMR:Q8GUI6 IntAct:Q8GUI6
PaxDb:Q8GUI6 PRIDE:Q8GUI6 EnsemblPlants:AT4G20400.1 GeneID:827788
KEGG:ath:AT4G20400 TAIR:At4g20400 HOGENOM:HOG000241335
InParanoid:Q8GUI6 KO:K11446 OMA:VQRSGEF PhylomeDB:Q8GUI6
ProtClustDB:CLSN2679960 Genevestigator:Q8GUI6 Uniprot:Q8GUI6
Length = 954
Score = 1696 (602.1 bits), Expect = 1.4e-174, P = 1.4e-174
Identities = 320/559 (57%), Positives = 391/559 (69%)
Query: 128 KVTARWRPEDSCRPDLEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPP 187
K+TARW P ++CRP ++DAP+FYPT E+F D L YI +R KAE YGICRIVPP +W+PP
Sbjct: 38 KITARWNPSEACRPLVDDAPIFYPTNEDFDDPLGYIEKLRSKAESYGICRIVPPVAWRPP 97
Query: 188 CPLKEKPIWDSSTFVTRVQRVDKLQNRNSMRKVXXXXXXXXXXXXXX--XXMAVDCGSDS 245
CPLKEK IW++S F TR+Q +D LQNR ++K D G D+
Sbjct: 98 CPLKEKKIWENSKFPTRIQFIDLLQNREPIKKSTKTKKRKRRRISKIGYTRRKRDSGCDT 157
Query: 246 GNVSASGDVGCYEDERFGFEPGPAFTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLE 305
+ S S D + +FGF+ GP FTL FQKY + FK YF + D G A+
Sbjct: 158 AS-SGSSD----SEGKFGFQTGPDFTLEEFQKYDEYFKECYFQSE--DHPGSKASE---N 207
Query: 306 EHWEPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKS 365
+ ++P V+++EGEYWRIVE+AT+E+EV YGADLET FGSGFPK + ++Y +
Sbjct: 208 KKFKPKVKDLEGEYWRIVEQATDEVEVYYGADLETKKFGSGFPKYKPGYPISEADQYSQC 267
Query: 366 GWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPK 425
GWNLNN RLPGSVL++ES DISGV+VPWLY+GMCFS+FCWHVEDHHLYS+NY+H G PK
Sbjct: 268 GWNLNNLSRLPGSVLAFESCDISGVIVPWLYVGMCFSTFCWHVEDHHLYSMNYLHTGDPK 327
Query: 426 MWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGE 485
+WYG+PG A E M+K L DLFEEQPDLLH+LVTQLSP ILK EG+PVYR VQ +GE
Sbjct: 328 VWYGIPGNHAESFENVMKKRLPDLFEEQPDLLHQLVTQLSPRILKEEGVPVYRAVQRSGE 387
Query: 486 FVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAA 545
F+LTFP+AYHSGFNCGFNCAEAVNVAPVDWL HGQ A+E Y +Q RK+S+SHDKLLLGAA
Sbjct: 388 FILTFPKAYHSGFNCGFNCAEAVNVAPVDWLVHGQNAVEGYSKQRRKSSLSHDKLLLGAA 447
Query: 546 REAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKM 605
EA WEL+L KK T RWK C +DG+L KA+KKRV ME R L KM
Sbjct: 448 MEATYCLWELSLSKKKTPVIARWKRVCSEDGLLTKAVKKRVQMEEERLNHLQDGFSLRKM 507
Query: 606 ESNFDATSERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNFCSCAWGSKFFLYRYDTSE 665
E +FD EREC +C +DLH+SA C CS +R+ACLIHAK+ CSC ++ L R+ E
Sbjct: 508 EGDFDNKRERECFLCFYDLHMSASSCKCSPNRFACLIHAKDLCSCESKDRYILIRHTLDE 567
Query: 666 LNILVEALEGKLSAVYRWA 684
L LV ALEG L A+ WA
Sbjct: 568 LWALVRALEGDLDAIDLWA 586
>TAIR|locus:2044697 [details] [associations]
symbol:MEE27 "maternal effect embryo arrest 27"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009555
GO:GO:0003700 GO:GO:0009793 EMBL:AC004238 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
HOGENOM:HOG000241335 KO:K11446 IPI:IPI00542103 PIR:T00470
RefSeq:NP_181034.1 UniGene:At.53035 ProteinModelPortal:O64752
SMR:O64752 EnsemblPlants:AT2G34880.1 GeneID:818053
KEGG:ath:AT2G34880 TAIR:At2g34880 InParanoid:O64752 OMA:DICSCEG
PhylomeDB:O64752 ProtClustDB:CLSN2683666 ArrayExpress:O64752
Genevestigator:O64752 Uniprot:O64752
Length = 806
Score = 1585 (563.0 bits), Expect = 8.1e-163, P = 8.1e-163
Identities = 314/560 (56%), Positives = 381/560 (68%)
Query: 128 KVTARWRPEDSCRPDLEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPP 187
KV ARW P + RPD+ +APVF+PT EEF+DTL YI IRP AE +GICRIVPPS+W PP
Sbjct: 43 KVLARWDPANEKRPDIGEAPVFHPTSEEFEDTLAYIEKIRPLAESFGICRIVPPSNWSPP 102
Query: 188 CPLKEKPIWDSSTFVTRVQRVDKLQNRNSMRKVXXXXXXXXXXXXXXXXMAVDCGSDSGN 247
C LK IW + F TRVQ VD LQNR ++K V +G+
Sbjct: 103 CRLKGDSIWKNKNFPTRVQFVDLLQNRGPVKK---KTPKGRKRKRGKYSRTVAPKKRNGS 159
Query: 248 VSASGDVG-CYEDERFGFEPGPAFTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEE 306
VS S E+E FGFE GP FTL F+KYA FK YF R N +G
Sbjct: 160 VSKSVSTPKATEEENFGFESGPEFTLEKFEKYAQDFKDSYFERKDN----VG-------- 207
Query: 307 HWEPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASD-ERYIKS 365
+P VE IEGEYWRI+EK T E++VLYG DLE + GSGF K + +D ++YI S
Sbjct: 208 --DPSVEEIEGEYWRIIEKETNEVKVLYGTDLENPILGSGFSKGVKIPTRRNDMDKYISS 265
Query: 366 GWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPK 425
GWNLNN RL GS+LS+E +ISGV VPWLY+GMCFS+FCWHVED+HLYSLNY H+G PK
Sbjct: 266 GWNLNNLARLQGSLLSFEDCEISGVQVPWLYVGMCFSTFCWHVEDNHLYSLNYHHFGEPK 325
Query: 426 MWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGE 485
+WYGVPG A LE+AMRKHL DLF+EQPDLLH+LVTQ SP+ILK+EG+PVYR VQNAGE
Sbjct: 326 VWYGVPGSHATGLEKAMRKHLPDLFDEQPDLLHELVTQFSPTILKNEGVPVYRAVQNAGE 385
Query: 486 FVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAA 545
+VLTFPRAYHSGFNCGFNCAEAVNVAPVDWL HGQ A+E+Y ++ RKTS+SHDK+LLGAA
Sbjct: 386 YVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQNAVEIYSQETRKTSLSHDKILLGAA 445
Query: 546 REAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKM 605
EAV++ L+ ++ + WK FCGKDGI+ KA++ R+ ME R E L + +KM
Sbjct: 446 FEAVKS---LSAHGEDNTKRFSWKRFCGKDGIITKAIEARLRMEEKRIEALGNGFSLVKM 502
Query: 606 ESNFDATSERECSVCLFDLHLSAVGC-HCSS-DRYACLIHAKNFCSCAWGSKFFLYRYDT 663
+ +FD+ EREC C DLHLSA GC +CSS + Y C H + CSC +F RY
Sbjct: 503 DKDFDSNCERECISCFSDLHLSATGCKNCSSLEEYGCTKH--DICSCEGKDRFIFLRYTI 560
Query: 664 SELNILVEALEGKLSAVYRW 683
EL+ LV ALEG+ + W
Sbjct: 561 DELSSLVRALEGESDDLKAW 580
>TAIR|locus:2064910 [details] [associations]
symbol:AT2G38950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003700 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 HOGENOM:HOG000241335
KO:K11446 EMBL:AY127026 EMBL:BT001088 IPI:IPI00539605
RefSeq:NP_181429.2 UniGene:At.37227 ProteinModelPortal:Q8L7T6
SMR:Q8L7T6 PRIDE:Q8L7T6 EnsemblPlants:AT2G38950.1 GeneID:818480
KEGG:ath:AT2G38950 TAIR:At2g38950 eggNOG:NOG308887
InParanoid:Q8L7T6 OMA:FDCGFNC PhylomeDB:Q8L7T6
ProtClustDB:CLSN2918209 Genevestigator:Q8L7T6 Uniprot:Q8L7T6
Length = 708
Score = 1035 (369.4 bits), Expect = 6.4e-136, Sum P(3) = 6.4e-136
Identities = 206/442 (46%), Positives = 283/442 (64%)
Query: 265 EPGPAFTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGEYWRIVE 324
E GP +TL +F+ +AD +K +F K++ G ++ L+ + E +V +IE EY +IVE
Sbjct: 201 ERGPGYTLKSFKNFADTYKKSHFGM-KDEVLGSENSSPSLKPN-ELIVADIEKEYRQIVE 258
Query: 325 KATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWNLNNFPRLPGSVLSYES 384
EI VLYG DL+T FGSGFP + + S+ SGWNLN+ +LPGS+LS E
Sbjct: 259 SPLIEIGVLYGNDLDTATFGSGFP-----LSAPSESSKYSSGWNLNSTAKLPGSLLSLE- 312
Query: 385 GDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRK 444
D V VP L +GMC SS W E LYSL Y+H GAP++WY V G K + AM+
Sbjct: 313 -DCESVCVPRLSVGMCLSSQFWKSEKERLYSLCYLHVGAPRVWYSVAGCHRSKFKAAMKS 371
Query: 445 HLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCGFNC 504
+ ++ EQP H V +SP L EG+PV RCVQ+ G++V+ FP +Y+S F+CGFNC
Sbjct: 372 FILEMSGEQPKKSHNPVMMMSPYQLSVEGIPVTRCVQHPGQYVIIFPGSYYSAFDCGFNC 431
Query: 505 AEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSD 564
E N AP+DWLPHG IA+++ +E + + IS+DKLL AAREAV+ E L KKNT+
Sbjct: 432 LEKANFAPLDWLPHGDIAVQVNQEMSKTSLISYDKLLFSAAREAVKCLKEYGLSKKNTAC 491
Query: 565 NLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNFDATSERECSVCLFDL 624
RW D CG DG+ + +K R+ +E+ RREFL SS ++ +M+ ++DA ++REC VCL DL
Sbjct: 492 YTRWNDSCGTDGLFSNIIKSRIKLEKNRREFLISSLESQRMDKSYDAVNKRECCVCLGDL 551
Query: 625 HLSAVGCHCSSDRYACLIHAKNFCSCAWGSKFFLYRYDTSELNILVEALEGK-LSAVYRW 683
+LSAV C CS++RY+CL H + C+C K FLYRY ELN+LVEALEGK LS+++RW
Sbjct: 552 YLSAVNCSCSANRYSCLNHMRKLCACPCDRKSFLYRYTMDELNLLVEALEGKKLSSMFRW 611
Query: 684 ARLDLGLALSSFISRDNMDFDK 705
A +D S + + DK
Sbjct: 612 AGIDQKFCASPATTSSKPEEDK 633
Score = 265 (98.3 bits), Expect = 6.4e-136, Sum P(3) = 6.4e-136
Identities = 49/79 (62%), Positives = 62/79 (78%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFV 202
LE+APVF PTEEEF+DTL YI+S+R +AEPYGIC +VPP SWKPPC LKEK IW++STF
Sbjct: 105 LEEAPVFNPTEEEFRDTLSYISSLRDRAEPYGICCVVPPPSWKPPCLLKEKQIWEASTFF 164
Query: 203 TRVQRVD-KLQNRNSMRKV 220
+VQ + +NR ++V
Sbjct: 165 PQVQLFGIQTENRKIKKEV 183
Score = 67 (28.6 bits), Expect = 6.4e-136, Sum P(3) = 6.4e-136
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 1 MGTELMRVCIKEENDEVPSVPPGFESFASFTLKRV-QDTE 39
MG E + +K N + S PPGF S SF L+ V +D E
Sbjct: 1 MGIEGVSTYLKSGNMDTISAPPGFVSQTSFVLRNVPRDKE 40
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 740 (265.6 bits), Expect = 2.0e-95, Sum P(3) = 2.0e-95
Identities = 150/296 (50%), Positives = 187/296 (63%)
Query: 262 FGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGEYW 320
FGFE P +TL TF AD FK+ YF N V H P E +E E+W
Sbjct: 336 FGFEQAPRDYTLRTFGDMADSFKSDYF------------NMPV---HMVP-TELVEKEFW 379
Query: 321 RIVEKATEEIEVLYGADLETCVFGSGFP-KTLNQVGSASDERYIKSGWNLNNFPRLPGSV 379
R+V E++ V YGAD+ + FGSGFP K S +E Y+ SGWNLNN P L SV
Sbjct: 380 RLVSTIEEDVTVEYGADIASKDFGSGFPVKNGTFKVSPEEEGYLTSGWNLNNMPVLEASV 439
Query: 380 LSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLE 439
L++ + DI G+ +PWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYG PG A +LE
Sbjct: 440 LTHVTADICGMKLPWLYVGMCFSSFCWHIEDHWSYSVNYLHWGEPKTWYGAPGYAAEQLE 499
Query: 440 EAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFN 499
+ M+ +LFE QPDLLH+LVT ++P++L G+P+YR Q AGEFV+TFPRAYHSGFN
Sbjct: 500 DVMKGLAPELFESQPDLLHQLVTIMNPNLLMEHGVPIYRTNQCAGEFVITFPRAYHSGFN 559
Query: 500 CGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWEL 555
GFN AEAVN DWLP G+ +E YR R SHD++ A +A EL
Sbjct: 560 QGFNFAEAVNFCTADWLPLGRQCVEHYRSLYRYCVFSHDEMACNIAAKADSLELEL 615
Score = 138 (53.6 bits), Expect = 2.0e-95, Sum P(3) = 2.0e-95
Identities = 38/143 (26%), Positives = 65/143 (45%)
Query: 546 REAVRAHWEL--NLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTM 603
R V +H E+ N+ K +D+L + C + K + + E+ RE
Sbjct: 591 RYCVFSHDEMACNIAAK--ADSLELELACA----VQKDMNAMIQEEKILREKAYKLGMWH 644
Query: 604 KMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNFCSCAWGSKFFLYRY 661
+ ++D ER+C+ C +LSA+ C CS ++ CL H ++ CSC + Y+Y
Sbjct: 645 SQQVDYDILPDEERQCAKCRTTCYLSAITCPCSPEQVVCLHHTQDLCSCPARNYTLNYKY 704
Query: 662 DTSELNILVEALEGKLSAVYRWA 684
+EL +AL + + WA
Sbjct: 705 TLAELKTFFQALTARAESYDDWA 727
Score = 137 (53.3 bits), Expect = 2.0e-95, Sum P(3) = 2.0e-95
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPP--CPLKEKPIWDSSTFV 202
+ PVF P+ EEF D +I IRP AE GIC+I PP W+PP C + D F
Sbjct: 7 ECPVFEPSWEEFADPFGFINKIRPIAENTGICKIRPPPGWQPPFACDV------DRLHFT 60
Query: 203 TRVQRVDKLQNRNSMR 218
R+QR+++L+ + ++
Sbjct: 61 PRIQRLNELEAQTRVK 76
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 741 (265.9 bits), Expect = 2.2e-94, Sum P(3) = 2.2e-94
Identities = 149/291 (51%), Positives = 188/291 (64%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL TF + AD FK+ YF N V H P E +E E
Sbjct: 341 EAFGFEQAARDYTLRTFGEMADAFKSDYF------------NMPV---HMVP-TELVEKE 384
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + +E Y+ SGWNLNN P +
Sbjct: 385 FWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMPVMEQ 444
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DI G+ +PWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYG PG A +
Sbjct: 445 SVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQ 504
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LE+ M+K +LFE QPDLLH+LVT ++P+ L + G+PVYR Q AGEFV+TFPRAYHSG
Sbjct: 505 LEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSG 564
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREA 548
FN GFN AEAVN VDWLP G+ IE YR R SHD+++ A +A
Sbjct: 565 FNQGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKA 615
Score = 139 (54.0 bits), Expect = 2.2e-94, Sum P(3) = 2.2e-94
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPP--CPLKEKPIWDSSTFV 202
+ PVF P+ EEF D +I IRP AE GIC++ PP W+PP C + D F
Sbjct: 9 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDV------DKLHFT 62
Query: 203 TRVQRVDKLQNRNSMR 218
R+QR+++L+ + ++
Sbjct: 63 PRIQRLNELEAQTRVK 78
Score = 126 (49.4 bits), Expect = 2.2e-94, Sum P(3) = 2.2e-94
Identities = 49/174 (28%), Positives = 76/174 (43%)
Query: 530 GRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKK----R 585
GR+ I H +LL +R V +H E+ + +D L D ++A ++K
Sbjct: 586 GRQC-IEHYRLL---SRYCVFSHDEMICKMASKADIL--------DVVVASTVQKDMAIM 633
Query: 586 VDMERARREFLSSSSQTMKMESNFDA--TSERECSVCLFDLHLSAVGCHCSSDRYACLIH 643
+D E+ RE + T F+ ER+C C +SAV C C CL H
Sbjct: 634 IDDEKMLREKVQKLGVTDSERVAFELFPDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYH 693
Query: 644 AKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWARLDLGLALSSFIS 697
++ CSC YRY EL ++ AL+ + + WA ++ AL + IS
Sbjct: 694 VEDLCSCPTYQYKLGYRYTLEELYPMMNALKMRAESYNEWAS-NVNEALEAKIS 746
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 734 (263.4 bits), Expect = 5.4e-94, Sum P(3) = 5.4e-94
Identities = 148/291 (50%), Positives = 188/291 (64%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL TF + AD FK+ YF N V H P E +E E
Sbjct: 366 EAFGFEQAARDYTLRTFGEMADAFKSDYF------------NMPV---HMVP-TELVEKE 409
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP ++ S +E Y+ SGWNLNN P +
Sbjct: 410 FWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKISPEEEEYLDSGWNLNNMPVMEQ 469
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DI G+ +PWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVPG A +
Sbjct: 470 SVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQ 529
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LE M+K +LF QPDLLH+LVT ++P+ L + +PVYR Q AGEFV+TFPRAYHSG
Sbjct: 530 LENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSG 589
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREA 548
FN GFN AEAVN VDWLP G+ +E YR R SHD+++ A +A
Sbjct: 590 FNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKA 640
Score = 139 (54.0 bits), Expect = 5.4e-94, Sum P(3) = 5.4e-94
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPP--CPLKEKPIWDSSTFV 202
+ PVF P+ EEF D +I IRP AE GIC++ PP W+PP C + D F
Sbjct: 31 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDV------DKLHFT 84
Query: 203 TRVQRVDKLQNRNSMR 218
R+QR+++L+ + ++
Sbjct: 85 PRIQRLNELEAQTRVK 100
Score = 130 (50.8 bits), Expect = 5.4e-94, Sum P(3) = 5.4e-94
Identities = 37/131 (28%), Positives = 63/131 (48%)
Query: 575 DGILAKALKK----RVDMERARREFLSSSS--QTMKMESNFDATSERECSVCLFDLHLSA 628
D ++A ++K ++ E+A RE + + +M+ ER+C C +SA
Sbjct: 644 DVVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCIKCKTTCFMSA 703
Query: 629 VGCHCSSDRYACLIHAKNFCSCAWGSKFFL-YRYDTSELNILVEALEGKLSAVYRWARLD 687
+ C C CL H K CSC K+ L YRY +L ++ AL+ + + WA L+
Sbjct: 704 ISCSCKPGLLVCLHHVKELCSCP-PYKYNLRYRYTLDDLYPMMNALKLRAESYNEWA-LN 761
Query: 688 LGLALSSFISR 698
+ AL + I++
Sbjct: 762 VNEALEAKINK 772
Score = 38 (18.4 bits), Expect = 2.2e-83, Sum P(3) = 2.2e-83
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 31 TLKRVQDTEKHDCDI 45
T+K+ + TEK DC++
Sbjct: 276 TIKQ-EPTEKKDCEL 289
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 734 (263.4 bits), Expect = 5.4e-94, Sum P(3) = 5.4e-94
Identities = 148/291 (50%), Positives = 188/291 (64%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL TF + AD FK+ YF N V H P E +E E
Sbjct: 366 EAFGFEQAARDYTLRTFGEMADAFKSDYF------------NMPV---HMVP-TELVEKE 409
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP ++ S +E Y+ SGWNLNN P +
Sbjct: 410 FWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQ 469
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DI G+ +PWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVPG A +
Sbjct: 470 SVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQ 529
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LE M+K +LF QPDLLH+LVT ++P+ L + +PVYR Q AGEFV+TFPRAYHSG
Sbjct: 530 LENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSG 589
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREA 548
FN GFN AEAVN VDWLP G+ +E YR R SHD+++ A +A
Sbjct: 590 FNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKA 640
Score = 139 (54.0 bits), Expect = 5.4e-94, Sum P(3) = 5.4e-94
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPP--CPLKEKPIWDSSTFV 202
+ PVF P+ EEF D +I IRP AE GIC++ PP W+PP C + D F
Sbjct: 31 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDV------DKLHFT 84
Query: 203 TRVQRVDKLQNRNSMR 218
R+QR+++L+ + ++
Sbjct: 85 PRIQRLNELEAQTRVK 100
Score = 130 (50.8 bits), Expect = 5.4e-94, Sum P(3) = 5.4e-94
Identities = 37/131 (28%), Positives = 63/131 (48%)
Query: 575 DGILAKALKK----RVDMERARREFLSSSS--QTMKMESNFDATSERECSVCLFDLHLSA 628
D ++A ++K ++ E+A RE + + +M+ ER+C C +SA
Sbjct: 644 DVVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSA 703
Query: 629 VGCHCSSDRYACLIHAKNFCSCAWGSKFFL-YRYDTSELNILVEALEGKLSAVYRWARLD 687
+ C C CL H K CSC K+ L YRY +L ++ AL+ + + WA L+
Sbjct: 704 ISCSCKPGLLVCLHHVKELCSCP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA-LN 761
Query: 688 LGLALSSFISR 698
+ AL + I++
Sbjct: 762 VNEALEAKINK 772
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 734 (263.4 bits), Expect = 5.4e-94, Sum P(3) = 5.4e-94
Identities = 148/291 (50%), Positives = 188/291 (64%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL TF + AD FK+ YF N V H P E +E E
Sbjct: 368 EAFGFEQAARDYTLRTFGEMADAFKSDYF------------NMPV---HMVP-TELVEKE 411
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP ++ S +E Y+ SGWNLNN P +
Sbjct: 412 FWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKISPEEEEYLDSGWNLNNMPVMEQ 471
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DI G+ +PWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVPG A +
Sbjct: 472 SVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQ 531
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LE M+K +LF QPDLLH+LVT ++P+ L + +PVYR Q AGEFV+TFPRAYHSG
Sbjct: 532 LENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSG 591
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREA 548
FN GFN AEAVN VDWLP G+ +E YR R SHD+++ A +A
Sbjct: 592 FNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKA 642
Score = 139 (54.0 bits), Expect = 5.4e-94, Sum P(3) = 5.4e-94
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPP--CPLKEKPIWDSSTFV 202
+ PVF P+ EEF D +I IRP AE GIC++ PP W+PP C + D F
Sbjct: 31 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDV------DKLHFT 84
Query: 203 TRVQRVDKLQNRNSMR 218
R+QR+++L+ + ++
Sbjct: 85 PRIQRLNELEAQTRVK 100
Score = 130 (50.8 bits), Expect = 5.4e-94, Sum P(3) = 5.4e-94
Identities = 37/131 (28%), Positives = 63/131 (48%)
Query: 575 DGILAKALKK----RVDMERARREFLSSSS--QTMKMESNFDATSERECSVCLFDLHLSA 628
D ++A ++K ++ E+A RE + + +M+ ER+C C +SA
Sbjct: 646 DVVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCIKCKTTCFMSA 705
Query: 629 VGCHCSSDRYACLIHAKNFCSCAWGSKFFL-YRYDTSELNILVEALEGKLSAVYRWARLD 687
+ C C CL H K CSC K+ L YRY +L ++ AL+ + + WA L+
Sbjct: 706 ISCSCKPGLLVCLHHVKELCSCP-PYKYNLRYRYTLDDLYPMMNALKLRAESYNEWA-LN 763
Query: 688 LGLALSSFISR 698
+ AL + I++
Sbjct: 764 VNEALEAKINK 774
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 730 (262.0 bits), Expect = 6.2e-93, Sum P(3) = 6.2e-93
Identities = 148/291 (50%), Positives = 188/291 (64%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL TF + AD FK+ YF N V H P E +E E
Sbjct: 365 EAFGFEQAARDYTLRTFGEMADAFKSDYF------------NMPV---HMVP-TELVEKE 408
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP +V S +E Y+ SGWNLNN P +
Sbjct: 409 FWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKVKLSPEEEEYLDSGWNLNNMPVMEQ 468
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DI G+ +PWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVPG A +
Sbjct: 469 SVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGFAAEQ 528
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LE M++ +LF QPDLLH+LVT ++P+ L + +PVYR Q AGEFV+TFPRAYHSG
Sbjct: 529 LEAVMKRLAPELFVSQPDLLHQLVTIMNPNTLMTHQVPVYRTNQCAGEFVITFPRAYHSG 588
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREA 548
FN GFN AEAVN VDWLP G+ +E YR R SHD+++ A +A
Sbjct: 589 FNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICRMASKA 639
Score = 130 (50.8 bits), Expect = 6.2e-93, Sum P(3) = 6.2e-93
Identities = 37/131 (28%), Positives = 63/131 (48%)
Query: 575 DGILAKALKK----RVDMERARREFLSSSS--QTMKMESNFDATSERECSVCLFDLHLSA 628
D ++A ++K ++ E+A RE + + +M+ ER+C C +SA
Sbjct: 643 DVVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSA 702
Query: 629 VGCHCSSDRYACLIHAKNFCSCAWGSKFFL-YRYDTSELNILVEALEGKLSAVYRWARLD 687
+ C C CL H K CSC K+ L YRY +L ++ AL+ + + WA L+
Sbjct: 703 ISCSCKPGLLVCLHHVKELCSCP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA-LN 760
Query: 688 LGLALSSFISR 698
+ AL + I++
Sbjct: 761 VNEALEAKINK 771
Score = 126 (49.4 bits), Expect = 6.2e-93, Sum P(3) = 6.2e-93
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 132 RWR-PEDSCRPDLEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPP--C 188
RW P P E PVF P+ E F D +I IRP AE GIC++ PP W+PP C
Sbjct: 18 RWPGPLGEFLPPPE-CPVFEPSWE-FADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFAC 75
Query: 189 PLKEKPIWDSSTFVTRVQRVDKLQNRNSMR 218
+ D F R+QR+++L+ + ++
Sbjct: 76 DV------DKLHFTPRIQRLNELEAQTRVK 99
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 741 (265.9 bits), Expect = 2.0e-92, Sum P(3) = 2.0e-92
Identities = 149/291 (51%), Positives = 188/291 (64%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL TF + AD FK+ YF N V H P E +E E
Sbjct: 329 EAFGFEQAARDYTLRTFGEMADAFKSDYF------------NMPV---HMVP-TELVEKE 372
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + +E Y+ SGWNLNN P +
Sbjct: 373 FWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMPVMEQ 432
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DI G+ +PWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYG PG A +
Sbjct: 433 SVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQ 492
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LE+ M+K +LFE QPDLLH+LVT ++P+ L + G+PVYR Q AGEFV+TFPRAYHSG
Sbjct: 493 LEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSG 552
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREA 548
FN GFN AEAVN VDWLP G+ IE YR R SHD+++ A +A
Sbjct: 553 FNQGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKA 603
Score = 126 (49.4 bits), Expect = 2.0e-92, Sum P(3) = 2.0e-92
Identities = 49/174 (28%), Positives = 76/174 (43%)
Query: 530 GRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKK----R 585
GR+ I H +LL +R V +H E+ + +D L D ++A ++K
Sbjct: 574 GRQC-IEHYRLL---SRYCVFSHDEMICKMASKADIL--------DVVVASTVQKDMAIM 621
Query: 586 VDMERARREFLSSSSQTMKMESNFDA--TSERECSVCLFDLHLSAVGCHCSSDRYACLIH 643
+D E+ RE + T F+ ER+C C +SAV C C CL H
Sbjct: 622 IDDEKMLREKVQKLGVTDSERVAFELFPDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYH 681
Query: 644 AKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWARLDLGLALSSFIS 697
++ CSC YRY EL ++ AL+ + + WA ++ AL + IS
Sbjct: 682 VEDLCSCPTYQYKLGYRYTLEELYPMMNALKMRAESYNEWAS-NVNEALEAKIS 734
Score = 120 (47.3 bits), Expect = 2.0e-92, Sum P(3) = 2.0e-92
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 148 VFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPP--CPLKEKPIWDSSTFVTRV 205
VF P+ EEF D +I +RP AE GIC++ PP W+PP C + D F R+
Sbjct: 1 VFEPSWEEFADPFAFIM-LRPIAEQTGICKVRPPPDWQPPFACDV------DKLHFTPRI 53
Query: 206 QRVDKLQNRNSMR 218
QR+++L+ + ++
Sbjct: 54 QRLNELEAQTRVK 66
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 741 (265.9 bits), Expect = 2.1e-92, Sum P(3) = 2.1e-92
Identities = 149/291 (51%), Positives = 188/291 (64%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL TF + AD FK+ YF N V H P E +E E
Sbjct: 340 EAFGFEQAARDYTLRTFGEMADAFKSDYF------------NMPV---HMVP-TELVEKE 383
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + +E Y+ SGWNLNN P +
Sbjct: 384 FWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMPVMEQ 443
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DI G+ +PWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYG PG A +
Sbjct: 444 SVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQ 503
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LE+ M+K +LFE QPDLLH+LVT ++P+ L + G+PVYR Q AGEFV+TFPRAYHSG
Sbjct: 504 LEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSG 563
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREA 548
FN GFN AEAVN VDWLP G+ IE YR R SHD+++ A +A
Sbjct: 564 FNQGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKA 614
Score = 126 (49.4 bits), Expect = 2.1e-92, Sum P(3) = 2.1e-92
Identities = 49/174 (28%), Positives = 76/174 (43%)
Query: 530 GRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKK----R 585
GR+ I H +LL +R V +H E+ + +D L D ++A ++K
Sbjct: 585 GRQC-IEHYRLL---SRYCVFSHDEMICKMASKADIL--------DVVVASTVQKDMAIM 632
Query: 586 VDMERARREFLSSSSQTMKMESNFDA--TSERECSVCLFDLHLSAVGCHCSSDRYACLIH 643
+D E+ RE + T F+ ER+C C +SAV C C CL H
Sbjct: 633 IDDEKMLREKVQKLGVTDSERVAFELFPDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYH 692
Query: 644 AKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWARLDLGLALSSFIS 697
++ CSC YRY EL ++ AL+ + + WA ++ AL + IS
Sbjct: 693 VEDLCSCPTYQYKLGYRYTLEELYPMMNALKMRAESYNEWAS-NVNEALEAKIS 745
Score = 120 (47.3 bits), Expect = 2.1e-92, Sum P(3) = 2.1e-92
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 148 VFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPP--CPLKEKPIWDSSTFVTRV 205
VF P+ EEF D +I +RP AE GIC++ PP W+PP C + D F R+
Sbjct: 12 VFEPSWEEFADPFAFIM-LRPIAEQTGICKVRPPPDWQPPFACDV------DKLHFTPRI 64
Query: 206 QRVDKLQNRNSMR 218
QR+++L+ + ++
Sbjct: 65 QRLNELEAQTRVK 77
>ZFIN|ZDB-GENE-030424-1 [details] [associations]
symbol:kdm5bb "lysine (K)-specific demethylase 5Bb"
species:7955 "Danio rerio" [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030424-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CABZ01042196 EMBL:BX664742
Ensembl:ENSDART00000005583 Bgee:G1K2I1 Uniprot:G1K2I1
Length = 1522
Score = 726 (260.6 bits), Expect = 3.1e-92, Sum P(3) = 3.1e-92
Identities = 143/295 (48%), Positives = 189/295 (64%)
Query: 256 CYEDERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVEN 314
C E FGFE +TL F + AD FK+ YF N V H P E
Sbjct: 367 CKPQEAFGFEQAHRDYTLKAFGEMADSFKSDYF------------NMPV---HMVP-TEL 410
Query: 315 IEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSAS-DERYIKSGWNLNNFP 373
+E E+WR+V E++ V YGAD+ + FGSGFP + A DE+Y++ GWNLNN
Sbjct: 411 VEKEFWRLVGTIQEDVTVEYGADIASKEFGSGFPIKGGRFKIAPHDEKYLQCGWNLNNMA 470
Query: 374 RLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGK 433
+ SVL++ + DI G+ +PWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYG PG
Sbjct: 471 MMTPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGF 530
Query: 434 DALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRA 493
A +LE M+K +LF+ QPDLLH+LVT ++P+ L + G+P+YR Q AGEFV+TFPR+
Sbjct: 531 AAEQLEAVMKKLAPELFDSQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRS 590
Query: 494 YHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREA 548
YHSGFN GFN AEAVN VDW+P G+ ++ YR+ R SHD+++ A +A
Sbjct: 591 YHSGFNQGFNFAEAVNFCTVDWMPLGRQCVDHYRQLHRYCVFSHDEMVCNMAMKA 645
Score = 140 (54.3 bits), Expect = 3.1e-92, Sum P(3) = 3.1e-92
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPP--CPLKEKPIWDSSTFV 202
+ PVF P+ EEF+D +I IRP AE GIC++ PP W+PP C + D F
Sbjct: 14 ECPVFEPSWEEFKDPFAFINKIRPIAEKTGICKVRPPPDWQPPFACDV------DRLHFT 67
Query: 203 TRVQRVDKLQNRNSMR 218
R+QR+++L+ + ++
Sbjct: 68 PRIQRLNELEAQTRVK 83
Score = 120 (47.3 bits), Expect = 3.1e-92, Sum P(3) = 3.1e-92
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 565 NLRWKDFCGKDGILAKALKKRVDM----ERARREFLSSS--SQTMKMESNFDATSERECS 618
N+ K C D +LA A++K + + ER RE + +Q + + A ER+C
Sbjct: 640 NMAMKADC-LDVVLASAVQKDMQLMIKEERELREKVRKMGVAQCELFQYDLLADDERQCV 698
Query: 619 VCLFDLHLSAVGCHCSSDRYACLIHAKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLS 678
C +LSA+ C C CL H + CSC + YR+ +L ++ A+ +
Sbjct: 699 KCRTTCYLSALTCPCRPGVQVCLYHTHDLCSCPISNYTLNYRFTLDDLYPMMNAVRQRAE 758
Query: 679 AVYRWA 684
WA
Sbjct: 759 YYDDWA 764
>FB|FBgn0031759 [details] [associations]
symbol:lid "little imaginal discs" species:7227 "Drosophila
melanogaster" [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IMP] [GO:0043992
"histone acetyltransferase activity (H3-K9 specific)" evidence=IMP]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0043970 "histone H3-K9 acetylation" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0007275 GO:GO:0045893 EMBL:AE014134
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 GO:GO:0045475 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0070822 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 OMA:TEMVERE
EMBL:AY095051 RefSeq:NP_001245908.1 RefSeq:NP_001245909.1
RefSeq:NP_001245910.1 RefSeq:NP_523486.1 RefSeq:NP_723140.1
UniGene:Dm.2779 PDB:2LM1 PDBsum:2LM1 ProteinModelPortal:Q9VMJ7
SMR:Q9VMJ7 DIP:DIP-29330N IntAct:Q9VMJ7 MINT:MINT-1672742
STRING:Q9VMJ7 PaxDb:Q9VMJ7 PRIDE:Q9VMJ7 EnsemblMetazoa:FBtr0079231
EnsemblMetazoa:FBtr0079232 EnsemblMetazoa:FBtr0307069
EnsemblMetazoa:FBtr0307070 EnsemblMetazoa:FBtr0307071 GeneID:33837
KEGG:dme:Dmel_CG9088 CTD:33837 FlyBase:FBgn0031759
InParanoid:Q9VMJ7 OrthoDB:EOG408KPT PhylomeDB:Q9VMJ7
GenomeRNAi:33837 NextBio:785524 Bgee:Q9VMJ7 GO:GO:0043992
Uniprot:Q9VMJ7
Length = 1838
Score = 702 (252.2 bits), Expect = 1.4e-91, Sum P(3) = 1.4e-91
Identities = 139/292 (47%), Positives = 180/292 (61%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL F + AD FK +YF + H P E +E E
Sbjct: 505 EAFGFEQAEREYTLQQFGQMADQFKQEYFRKPV---------------HLVP-TEMVERE 548
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWNLNNFPRLPGS 378
+WRIV E++ V YGADL T GSGFP + D+ Y +S WNLNN P L S
Sbjct: 549 FWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDS 608
Query: 379 VLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKL 438
+L + + DISG+ PW+Y+GMCF++FCWH EDH YS+NY+HWG PK WYGVPG A +
Sbjct: 609 ILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQF 668
Query: 439 EEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGF 498
EE M++ +LF QPDLLH+LVT ++P+IL + +PV+R Q+AGEFV+TFPRAYH+GF
Sbjct: 669 EETMKQAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGF 728
Query: 499 NCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVR 550
N G+N AEAVN AP DWL G+ + Y R SHD+L+ A E +
Sbjct: 729 NQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAK 780
Score = 151 (58.2 bits), Expect = 1.4e-91, Sum P(3) = 1.4e-91
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF PT EEF++ L YI+ IR AE GI +I+PP++W PP + D FV R
Sbjct: 160 ECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKILPPATWSPPFAVDV----DKLRFVPR 215
Query: 205 VQRVDKLQNRNSMR 218
VQR+++L+ + ++
Sbjct: 216 VQRLNELEAKTRVK 229
Score = 133 (51.9 bits), Expect = 1.4e-91, Sum P(3) = 1.4e-91
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 582 LKKRVDMERARREFLSSSSQTMKMESNFDATS--ERECSVCLFDLHLSAVGCHCSSDRYA 639
+ + VD E+ R+ L T F+ + ER C C LSAV C C+
Sbjct: 793 MAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIV 852
Query: 640 CLIHAKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRW 683
CL H C CA +YRY E+ ++++ L+ K + RW
Sbjct: 853 CLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERW 896
>RGD|1305429 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISO]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 RGD:1305429 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 HOGENOM:HOG000290719 HOVERGEN:HBG068574
IPI:IPI00781814 EMBL:BC099835 UniGene:Rn.206273 UniGene:Rn.224608
ProteinModelPortal:Q499M6 UCSC:RGD:1305429 InParanoid:Q499M6
Genevestigator:Q499M6 Uniprot:Q499M6
Length = 1099
Score = 736 (264.1 bits), Expect = 5.8e-86, Sum P(2) = 5.8e-86
Identities = 179/432 (41%), Positives = 239/432 (55%)
Query: 260 ERFGFEPG-PAFTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FK+ YF N V H P E +E E
Sbjct: 350 EAFGFEQAIREYTLQSFGEMADNFKSDYF------------NMPV---HMVP-TELVEKE 393
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFP-KTLNQVGSASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP K + +E Y SGWNLNN P L
Sbjct: 394 FWRLVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMPVLEQ 453
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DISG+ VPWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVP A +
Sbjct: 454 SVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQ 513
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE MR+ +LFE QPDLLH+LVT ++P++L G+PVYR Q AGEFV+TFPRAYHSG
Sbjct: 514 LEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSG 573
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAARE--------AV 549
FN G+N AEAVN DWLP G+ + YR R SH++L+ A + A
Sbjct: 574 FNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAA 633
Query: 550 RAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNF 609
EL L+ T + R ++ + G++ ++ V E S+ +T S
Sbjct: 634 MVCKELTLM---TEEETRLRESVVQMGVVMS--EEEVFELVPDDERQCSACRTTCFLSAL 688
Query: 610 DATSERECSVCLFDLHLSAVGCHCSSDRYACLIHA---KNFCSCAWGSKFFLYRYDTSEL 666
+ E VCL+ H + + C C CL + ++ S +G K YDT +
Sbjct: 689 TCSCNPERLVCLY--HPTDL-CSCPMQN-KCLRYRYPLEDLPSLLYGVKVRAQSYDTW-V 743
Query: 667 NILVEALEGKLS 678
N + EAL +
Sbjct: 744 NRVTEALSASFN 755
Score = 152 (58.6 bits), Expect = 5.8e-86, Sum P(2) = 5.8e-86
Identities = 32/74 (43%), Positives = 43/74 (58%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EEF D L +I IRP AE GIC+I PP W+PP + K F R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKTF----RFTPR 73
Query: 205 VQRVDKLQNRNSMR 218
VQR+++L+ +R
Sbjct: 74 VQRLNELEAMTRVR 87
Score = 145 (56.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 48/167 (28%), Positives = 74/167 (44%)
Query: 530 GRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDME 589
GR+ ++H + L R V +H EL + K +D D G ++ K L + E
Sbjct: 595 GRQC-VNHYRRL---RRHCVFSHEEL--IFKMAADP-ECLDV-GLAAMVCKELTLMTEEE 646
Query: 590 RARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNF 647
RE + M E F+ ER+CS C LSA+ C C+ +R CL H +
Sbjct: 647 TRLRESVVQMGVVMSEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 706
Query: 648 CSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA-RLDLGLALS 693
CSC +K YRY +L L+ ++ + + W R+ L+ S
Sbjct: 707 CSCPMQNKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVNRVTEALSAS 753
>UNIPROTKB|E9PSW7 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00781814
Ensembl:ENSRNOT00000056198 OMA:IRTRTRN ArrayExpress:E9PSW7
Uniprot:E9PSW7
Length = 1099
Score = 736 (264.1 bits), Expect = 5.8e-86, Sum P(2) = 5.8e-86
Identities = 179/432 (41%), Positives = 239/432 (55%)
Query: 260 ERFGFEPG-PAFTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FK+ YF N V H P E +E E
Sbjct: 350 EAFGFEQAIREYTLQSFGEMADNFKSDYF------------NMPV---HMVP-TELVEKE 393
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFP-KTLNQVGSASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP K + +E Y SGWNLNN P L
Sbjct: 394 FWRLVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMPVLEQ 453
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DISG+ VPWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVP A +
Sbjct: 454 SVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQ 513
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE MR+ +LFE QPDLLH+LVT ++P++L G+PVYR Q AGEFV+TFPRAYHSG
Sbjct: 514 LEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSG 573
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAARE--------AV 549
FN G+N AEAVN DWLP G+ + YR R SH++L+ A + A
Sbjct: 574 FNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAA 633
Query: 550 RAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNF 609
EL L+ T + R ++ + G++ ++ V E S+ +T S
Sbjct: 634 MVCKELTLM---TEEETRLRESVVQMGVVMS--EEEVFELVPDDERQCSACRTTCFLSAL 688
Query: 610 DATSERECSVCLFDLHLSAVGCHCSSDRYACLIHA---KNFCSCAWGSKFFLYRYDTSEL 666
+ E VCL+ H + + C C CL + ++ S +G K YDT +
Sbjct: 689 TCSCNPERLVCLY--HPTDL-CSCPMQN-KCLRYRYPLEDLPSLLYGVKVRAQSYDTW-V 743
Query: 667 NILVEALEGKLS 678
N + EAL +
Sbjct: 744 NRVTEALSASFN 755
Score = 152 (58.6 bits), Expect = 5.8e-86, Sum P(2) = 5.8e-86
Identities = 32/74 (43%), Positives = 43/74 (58%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EEF D L +I IRP AE GIC+I PP W+PP + K F R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKTF----RFTPR 73
Query: 205 VQRVDKLQNRNSMR 218
VQR+++L+ +R
Sbjct: 74 VQRLNELEAMTRVR 87
Score = 145 (56.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 48/167 (28%), Positives = 74/167 (44%)
Query: 530 GRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDME 589
GR+ ++H + L R V +H EL + K +D D G ++ K L + E
Sbjct: 595 GRQC-VNHYRRL---RRHCVFSHEEL--IFKMAADP-ECLDV-GLAAMVCKELTLMTEEE 646
Query: 590 RARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNF 647
RE + M E F+ ER+CS C LSA+ C C+ +R CL H +
Sbjct: 647 TRLRESVVQMGVVMSEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 706
Query: 648 CSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA-RLDLGLALS 693
CSC +K YRY +L L+ ++ + + W R+ L+ S
Sbjct: 707 CSCPMQNKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVNRVTEALSAS 753
>UNIPROTKB|B4E1Y0 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 UniGene:Hs.80358 HGNC:HGNC:11115 ChiTaRS:KDM5D
HOVERGEN:HBG068574 EMBL:AK304027 IPI:IPI01013623 SMR:B4E1Y0
STRING:B4E1Y0 Ensembl:ENST00000535647 UCSC:uc004fuh.2
Uniprot:B4E1Y0
Length = 888
Score = 712 (255.7 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 168/388 (43%), Positives = 224/388 (57%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE ++L +F + AD FK+ YF N V H P E +E E
Sbjct: 371 EAFGFEQATQEYSLQSFGEMADSFKSDYF------------NMPV---HMVP-TELVEKE 414
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDER-YIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + ++ + +E+ Y SGWNLN P L
Sbjct: 415 FWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLDQ 474
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A
Sbjct: 475 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEH 534
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M+ +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 535 LEEVMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 594
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 595 FNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--AFPETLDLNL 652
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSS-QTMKMESN--FDAT 612
+ + ++ L KAL ++ + ER E L Q +K ++ A
Sbjct: 653 A---VAVHKEMFIMVQEERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCFLSAL 709
Query: 613 SERECS---VCLFDLHLSAVGCHCSSDR 637
+ +C VCL H++ + C CSS R
Sbjct: 710 ACYDCPDGLVCLS--HINDL-CKCSSSR 734
Score = 161 (61.7 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EFQD L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQNRNSMR 218
VQR+++L+ + ++
Sbjct: 69 VQRLNELEAQTRVK 82
Score = 121 (47.7 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 29/101 (28%), Positives = 43/101 (42%)
Query: 586 VDMERARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIH 643
V ER R+ L T F+ ER+C C LSA+ C+ D CL H
Sbjct: 664 VQEERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 723
Query: 644 AKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
+ C C+ ++ YRY EL ++ L+ + + WA
Sbjct: 724 INDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWA 764
Score = 45 (20.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 515 WLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKN 561
W ++A+E+ E GRK S + L ARE + EL KN
Sbjct: 763 WANKVRVALEV--EDGRKRSFEELRALESEARERRFPNSELLQRLKN 807
>UNIPROTKB|Q30DN6 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 EMBL:DQ156494 RefSeq:NP_001106929.1 UniGene:Cfa.38975
ProteinModelPortal:Q30DN6 SMR:Q30DN6 GeneID:100134936
KEGG:cfa:100134936 CTD:8284 NextBio:20789320 Uniprot:Q30DN6
Length = 1545
Score = 736 (264.1 bits), Expect = 5.0e-85, Sum P(2) = 5.0e-85
Identities = 171/388 (44%), Positives = 226/388 (58%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FKA YFS + H P E +E E
Sbjct: 374 EAFGFEQATQEYTLQSFGEMADSFKADYFS---------------MPVHMVP-TELVEKE 417
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQ-VGSASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + +Q + S +E Y SGWNLN P L
Sbjct: 418 FWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSQRILSPEEEEYATSGWNLNVMPVLDQ 477
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A +
Sbjct: 478 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEQ 537
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M++ +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 538 LEEVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 597
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 598 FNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--AFPEKLDLNL 655
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSS-QTMKMESN--FDAT 612
+ + ++ L KAL ++ + ER E L Q +K ++ A
Sbjct: 656 A---VAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSAL 712
Query: 613 SERECS---VCLFDLHLSAVGCHCSSDR 637
+ +C VCL H++ + C CSS R
Sbjct: 713 ACYDCPDGLVCLS--HINDL-CKCSSSR 737
Score = 157 (60.3 bits), Expect = 5.0e-85, Sum P(2) = 5.0e-85
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF PT EF+D L YI IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPTWAEFRDPLDYITKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQNRNSMR 218
+QR+++L+ + ++
Sbjct: 69 IQRLNELEAQTRVK 82
Score = 120 (47.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 29/101 (28%), Positives = 43/101 (42%)
Query: 586 VDMERARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIH 643
V ER R+ L T F+ ER+C C LSA+ C+ D CL H
Sbjct: 667 VQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 726
Query: 644 AKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
+ C C+ ++ YRY EL ++ L+ + + WA
Sbjct: 727 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKIRAESFDTWA 767
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 515 WLPHGQIAIELYREQGRKTSISHDKLLLGAARE 547
W ++A+E+ E GRK S + L ARE
Sbjct: 766 WANKVRVALEV--EDGRKRSFEELRALESEARE 796
>UNIPROTKB|F1MQ59 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:DAAA02014587
IPI:IPI00715082 Ensembl:ENSBTAT00000027280 Uniprot:F1MQ59
Length = 1693
Score = 737 (264.5 bits), Expect = 8.0e-85, Sum P(2) = 8.0e-85
Identities = 180/432 (41%), Positives = 240/432 (55%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FK+ YF N V H P E +E E
Sbjct: 350 EAFGFEQAVREYTLQSFGEMADNFKSDYF------------NMPV---HMVP-TELVEKE 393
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFP-KTLNQVGSASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP K + +E Y SGWNLNN P L
Sbjct: 394 FWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNNMPVLEQ 453
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DISG+ VPWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVP A +
Sbjct: 454 SVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQ 513
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE MR+ +LFE QPDLLH+LVT ++P++L G+PVYR Q AGEFV+TFPRAYHSG
Sbjct: 514 LEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSG 573
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAARE--------AV 549
FN G+N AEAVN DWLP G+ + YR R SH++L+ A + A
Sbjct: 574 FNQGYNFAEAVNFCTADWLPIGRQCVSHYRRLRRHCVFSHEELIFKMAADPECLDVGLAA 633
Query: 550 RAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNF 609
EL LL T + R ++ + G+L ++ V E S+ +T S
Sbjct: 634 MVCKELTLL---TEEETRLRESVMQMGVLMS--EEEVFELVPDDERQCSACRTTCFLSAL 688
Query: 610 DATSERECSVCLFDLHLSAVGCHCSSDRYACLIHA---KNFCSCAWGSKFFLYRYDTSEL 666
+ E VCL+ H + + C C + CL + ++ S +G K YDT +
Sbjct: 689 TCSCNPERLVCLY--HPTDL-CPCPMQK-KCLRYRYPLEDLPSLLYGVKVRAQSYDTW-V 743
Query: 667 NILVEALEGKLS 678
+ + EAL +
Sbjct: 744 SRVTEALSANFN 755
Score = 156 (60.0 bits), Expect = 8.0e-85, Sum P(2) = 8.0e-85
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EEF D L +I IRP AE GIC+I PP W+PP + K S F R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPMAEKTGICKIRPPKDWQPPFACEVK----SFRFTPR 73
Query: 205 VQRVDKLQNRNSMR 218
VQR+++L+ +R
Sbjct: 74 VQRLNELEAMTRVR 87
Score = 140 (54.3 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 45/156 (28%), Positives = 67/156 (42%)
Query: 530 GRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDME 589
GR+ +SH + L R V +H EL + K +D D G ++ K L + E
Sbjct: 595 GRQC-VSHYRRL---RRHCVFSHEEL--IFKMAADP-ECLDV-GLAAMVCKELTLLTEEE 646
Query: 590 RARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNF 647
RE + M E F+ ER+CS C LSA+ C C+ +R CL H +
Sbjct: 647 TRLRESVMQMGVLMSEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 706
Query: 648 CSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRW 683
C C K YRY +L L+ ++ + + W
Sbjct: 707 CPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTW 742
Score = 40 (19.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 286 YFSRDKNDAKGLGANTAVLEEHWEPLV-ENIEGEYWRIVEKATEEIEVL 333
Y S K+ ++G G++T + PLV ++E + A ++E L
Sbjct: 1403 YSSASKSCSQGKGSSTPRKQPRKSPLVPRSLEPPVLELSPGAKAQLEEL 1451
>MGI|MGI:2136980 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:2136980 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927
HOGENOM:HOG000290719 OMA:ECSKPRE ChiTaRS:KDM5A EMBL:AC155720
EMBL:AC078896 EMBL:AK135085 EMBL:AK144877 EMBL:AK166055
EMBL:BC080691 IPI:IPI00849089 RefSeq:NP_666109.2 UniGene:Mm.404761
UniGene:Mm.463658 ProteinModelPortal:Q3UXZ9 SMR:Q3UXZ9
IntAct:Q3UXZ9 STRING:Q3UXZ9 PhosphoSite:Q3UXZ9 PaxDb:Q3UXZ9
PRIDE:Q3UXZ9 Ensembl:ENSMUST00000100996 GeneID:214899
KEGG:mmu:214899 UCSC:uc009dne.2 InParanoid:Q3UXZ9 NextBio:374501
Bgee:Q3UXZ9 CleanEx:MM_RBP2 Genevestigator:Q3UXZ9 Uniprot:Q3UXZ9
Length = 1690
Score = 741 (265.9 bits), Expect = 9.9e-85, Sum P(2) = 9.9e-85
Identities = 180/432 (41%), Positives = 239/432 (55%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FK+ YF N V H P E +E E
Sbjct: 350 EAFGFEQAVREYTLQSFGEMADNFKSDYF------------NMPV---HMVP-TELVEKE 393
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSA-SDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFPK Q +E Y SGWNLNN P L
Sbjct: 394 FWRLVSSIEEDVIVEYGADISSKDFGSGFPKKDGQRKMLPEEEEYALSGWNLNNMPVLEQ 453
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DISG+ VPWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVP A +
Sbjct: 454 SVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQ 513
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE MR+ +LFE QPDLLH+LVT ++P++L G+PVYR Q AGEFV+TFPRAYHSG
Sbjct: 514 LEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSG 573
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAARE--------AV 549
FN G+N AEAVN DWLP G+ + YR R SH++L+ A + A
Sbjct: 574 FNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAA 633
Query: 550 RAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNF 609
EL L+ T + R ++ + G++ ++ V E S+ +T S
Sbjct: 634 MVCKELTLM---TEEETRLRESVVQMGVVMS--EEEVFELVPDDERQCSACRTTCFLSAL 688
Query: 610 DATSERECSVCLFDLHLSAVGCHCSSDRYACLIHA---KNFCSCAWGSKFFLYRYDTSEL 666
+ E VCL+ H + + C C CL + ++ S +G K YDT +
Sbjct: 689 TCSCNPERLVCLY--HPTDL-CSCPMQN-KCLRYRYPLEDLPSLLYGVKVRAQSYDTW-V 743
Query: 667 NILVEALEGKLS 678
N + EAL +
Sbjct: 744 NRVTEALSASFN 755
Score = 151 (58.2 bits), Expect = 9.9e-85, Sum P(2) = 9.9e-85
Identities = 32/74 (43%), Positives = 43/74 (58%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EEF D L +I IRP AE GIC+I PP W+PP + K F R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPFAEKTGICKIRPPKDWQPPFACEVKTF----RFTPR 73
Query: 205 VQRVDKLQNRNSMR 218
VQR+++L+ +R
Sbjct: 74 VQRLNELEAMTRVR 87
Score = 145 (56.1 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 48/167 (28%), Positives = 74/167 (44%)
Query: 530 GRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDME 589
GR+ ++H + L R V +H EL + K +D D G ++ K L + E
Sbjct: 595 GRQC-VNHYRRL---RRHCVFSHEEL--IFKMAADP-ECLDV-GLAAMVCKELTLMTEEE 646
Query: 590 RARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNF 647
RE + M E F+ ER+CS C LSA+ C C+ +R CL H +
Sbjct: 647 TRLRESVVQMGVVMSEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 706
Query: 648 CSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA-RLDLGLALS 693
CSC +K YRY +L L+ ++ + + W R+ L+ S
Sbjct: 707 CSCPMQNKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVNRVTEALSAS 753
>UNIPROTKB|F1Q4J4 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927 OMA:ECSKPRE
EMBL:AAEX03015319 EMBL:AAEX03015320 RefSeq:XP_854690.3
Ensembl:ENSCAFT00000025008 GeneID:477727 KEGG:cfa:477727
Uniprot:F1Q4J4
Length = 1688
Score = 736 (264.1 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 180/432 (41%), Positives = 240/432 (55%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FK+ YF N V H P E +E E
Sbjct: 350 EAFGFEQAVREYTLQSFGEMADNFKSDYF------------NMPV---HMVP-TELVEKE 393
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFP-KTLNQVGSASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP K + +E Y SGWNLNN P L
Sbjct: 394 FWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNNMPVLEQ 453
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DISG+ VPWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVP A +
Sbjct: 454 SVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQ 513
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE MR+ +LFE QPDLLH+LVT ++P+IL G+PVYR Q AGEFV+TFPRAYHSG
Sbjct: 514 LEEVMRELAPELFESQPDLLHQLVTIMNPNILMEHGVPVYRTNQCAGEFVVTFPRAYHSG 573
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAARE--------AV 549
FN G+N AEAVN DWLP G+ + YR R SH++L+ A + A
Sbjct: 574 FNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAA 633
Query: 550 RAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNF 609
EL L+ T + R ++ + G+L ++ V E S+ +T S
Sbjct: 634 MVCKELTLM---TEEETRLRESVVQMGVLMS--EEEVFELVPDDERQCSACRTTCFLSAL 688
Query: 610 DATSERECSVCLFDLHLSAVGCHCSSDRYACLIHA---KNFCSCAWGSKFFLYRYDTSEL 666
+ E VCL+ H + + C C + CL + ++ S +G K YDT +
Sbjct: 689 TCSCNPERLVCLY--HPNDL-CPCPMQK-KCLRYRYPLEDLPSLLYGVKVRAQSYDTW-V 743
Query: 667 NILVEALEGKLS 678
+ + EAL +
Sbjct: 744 SRVTEALSANFN 755
Score = 155 (59.6 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EEF D L +I IRP AE GIC+I PP W+PP + K S F R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVK----SFRFTPR 73
Query: 205 VQRVDKLQNRNSMR 218
VQR+++L+ +R
Sbjct: 74 VQRLNELEAMTRVR 87
Score = 138 (53.6 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 44/156 (28%), Positives = 67/156 (42%)
Query: 530 GRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDME 589
GR+ ++H + L R V +H EL + K +D D G ++ K L + E
Sbjct: 595 GRQC-VNHYRRL---RRHCVFSHEEL--IFKMAADP-ECLDV-GLAAMVCKELTLMTEEE 646
Query: 590 RARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNF 647
RE + M E F+ ER+CS C LSA+ C C+ +R CL H +
Sbjct: 647 TRLRESVVQMGVLMSEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPNDL 706
Query: 648 CSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRW 683
C C K YRY +L L+ ++ + + W
Sbjct: 707 CPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTW 742
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 733 (263.1 bits), Expect = 1.8e-84, Sum P(3) = 1.8e-84
Identities = 149/291 (51%), Positives = 188/291 (64%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL TF + AD FK+ YF N V H P E +E E
Sbjct: 306 EAFGFEQAARDYTLRTFGEMADAFKSDYF------------NMPV---HMVP-TELVEKE 349
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP +V S +E Y+ SGWNLNN P +
Sbjct: 350 FWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKVKLSPEEEEYLDSGWNLNNMPVMEQ 409
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DI G+ +PWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVPG A +
Sbjct: 410 SVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQ 469
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LE M+K +LF QPDLLH+LVT ++P+ L + +PVYR Q AGEFV+TFPRAYHSG
Sbjct: 470 LETVMKKLAPELFISQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSG 529
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREA 548
FN GFN AEAVN VDWLP G+ +E YR R SHD+++ A +A
Sbjct: 530 FNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKA 580
Score = 122 (48.0 bits), Expect = 1.8e-84, Sum P(3) = 1.8e-84
Identities = 36/131 (27%), Positives = 63/131 (48%)
Query: 575 DGILAKALKK----RVDMERARREFLSSSS--QTMKMESNFDATSERECSVCLFDLHLSA 628
D ++A ++K ++ E+A RE + + +M+ ER+C C +SA
Sbjct: 584 DVVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSA 643
Query: 629 VGCHCSSDRYACLIHAKNFCSCAWGSKFFL-YRYDTSELNILVEALEGKLSAVYRWARLD 687
+ C C CL H + CSC K+ L YRY +L ++ AL+ + + WA L+
Sbjct: 644 LSCCCKPGLLVCLHHVQELCSCP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA-LN 701
Query: 688 LGLALSSFISR 698
+ AL + I++
Sbjct: 702 VNEALEAKINK 712
Score = 56 (24.8 bits), Expect = 1.8e-84, Sum P(3) = 1.8e-84
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 176 CRIVPPSSWKPP--CPLKEKPIWDSSTFVTRVQRVDKLQNRNSMR 218
C++ P W+PP C + D F R+QR+++L+ + ++
Sbjct: 2 CKVRDPHDWQPPFACDV------DKLHFTPRIQRLNELEAQTRVK 40
>UNIPROTKB|F5H1F7 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A IPI:IPI01018722
ProteinModelPortal:F5H1F7 SMR:F5H1F7 Ensembl:ENST00000382815
ArrayExpress:F5H1F7 Bgee:F5H1F7 Uniprot:F5H1F7
Length = 1636
Score = 734 (263.4 bits), Expect = 1.8e-84, Sum P(2) = 1.8e-84
Identities = 179/432 (41%), Positives = 240/432 (55%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FK+ YF N V H P E +E E
Sbjct: 350 EAFGFEQAVREYTLQSFGEMADNFKSDYF------------NMPV---HMVP-TELVEKE 393
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFP-KTLNQVGSASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP K + +E Y SGWNLNN P L
Sbjct: 394 FWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQ 453
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DISG+ VPWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVP A +
Sbjct: 454 SVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQ 513
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE MR+ +LFE QPDLLH+LVT ++P++L G+PVYR Q AGEFV+TFPRAYHSG
Sbjct: 514 LEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSG 573
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAARE--------AV 549
FN G+N AEAVN DWLP G+ + YR R SH++L+ A + A
Sbjct: 574 FNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAA 633
Query: 550 RAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNF 609
EL L+ T + R ++ + G+L ++ V E S+ +T S
Sbjct: 634 MVCKELTLM---TEEETRLRESVVQMGVLMS--EEEVFELVPDDERQCSACRTTCFLSAL 688
Query: 610 DATSERECSVCLFDLHLSAVGCHCSSDRYACLIHA---KNFCSCAWGSKFFLYRYDTSEL 666
+ E VCL+ H + + C C + CL + ++ S +G K YDT +
Sbjct: 689 TCSCNPERLVCLY--HPTDL-CPCPMQK-KCLRYRYPLEDLPSLLYGVKVRAQSYDTW-V 743
Query: 667 NILVEALEGKLS 678
+ + EAL +
Sbjct: 744 SRVTEALSANFN 755
Score = 155 (59.6 bits), Expect = 1.8e-84, Sum P(2) = 1.8e-84
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EEF D L +I IRP AE GIC+I PP W+PP + K S F R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVK----SFRFTPR 73
Query: 205 VQRVDKLQNRNSMR 218
VQR+++L+ +R
Sbjct: 74 VQRLNELEAMTRVR 87
Score = 137 (53.3 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 44/156 (28%), Positives = 67/156 (42%)
Query: 530 GRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDME 589
GR+ ++H + L R V +H EL + K +D D G ++ K L + E
Sbjct: 595 GRQC-VNHYRRL---RRHCVFSHEEL--IFKMAADP-ECLDV-GLAAMVCKELTLMTEEE 646
Query: 590 RARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNF 647
RE + M E F+ ER+CS C LSA+ C C+ +R CL H +
Sbjct: 647 TRLRESVVQMGVLMSEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 706
Query: 648 CSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRW 683
C C K YRY +L L+ ++ + + W
Sbjct: 707 CPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTW 742
>UNIPROTKB|P29375 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0016568 GO:GO:0006366
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 eggNOG:NOG327026 KO:K11446 EMBL:S66431 EMBL:AB209999
EMBL:BC048307 EMBL:BC053893 EMBL:BC110916 IPI:IPI00021363
IPI:IPI01014284 PIR:I78879 RefSeq:NP_001036068.1 UniGene:Hs.76272
PDB:2JXJ PDB:2KGG PDB:2KGI PDB:3GL6 PDBsum:2JXJ PDBsum:2KGG
PDBsum:2KGI PDBsum:3GL6 ProteinModelPortal:P29375 SMR:P29375
DIP:DIP-472N IntAct:P29375 STRING:P29375 PhosphoSite:P29375
DMDM:215274124 PaxDb:P29375 PRIDE:P29375 Ensembl:ENST00000399788
GeneID:5927 KEGG:hsa:5927 UCSC:uc001qif.1 CTD:5927
GeneCards:GC12M000389 H-InvDB:HIX0010308 HGNC:HGNC:9886
HPA:HPA006201 MIM:180202 neXtProt:NX_P29375 PharmGKB:PA34250
HOGENOM:HOG000290719 OMA:ECSKPRE OrthoDB:EOG4GB758 ChiTaRS:KDM5A
EvolutionaryTrace:P29375 GenomeRNAi:5927 NextBio:23088
ArrayExpress:P29375 Bgee:P29375 CleanEx:HS_JARID1A CleanEx:HS_RBP2
Genevestigator:P29375 GermOnline:ENSG00000073614 Uniprot:P29375
Length = 1690
Score = 734 (263.4 bits), Expect = 2.1e-84, Sum P(2) = 2.1e-84
Identities = 179/432 (41%), Positives = 240/432 (55%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FK+ YF N V H P E +E E
Sbjct: 350 EAFGFEQAVREYTLQSFGEMADNFKSDYF------------NMPV---HMVP-TELVEKE 393
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFP-KTLNQVGSASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP K + +E Y SGWNLNN P L
Sbjct: 394 FWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQ 453
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DISG+ VPWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVP A +
Sbjct: 454 SVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQ 513
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE MR+ +LFE QPDLLH+LVT ++P++L G+PVYR Q AGEFV+TFPRAYHSG
Sbjct: 514 LEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSG 573
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAARE--------AV 549
FN G+N AEAVN DWLP G+ + YR R SH++L+ A + A
Sbjct: 574 FNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAA 633
Query: 550 RAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNF 609
EL L+ T + R ++ + G+L ++ V E S+ +T S
Sbjct: 634 MVCKELTLM---TEEETRLRESVVQMGVLMS--EEEVFELVPDDERQCSACRTTCFLSAL 688
Query: 610 DATSERECSVCLFDLHLSAVGCHCSSDRYACLIHA---KNFCSCAWGSKFFLYRYDTSEL 666
+ E VCL+ H + + C C + CL + ++ S +G K YDT +
Sbjct: 689 TCSCNPERLVCLY--HPTDL-CPCPMQK-KCLRYRYPLEDLPSLLYGVKVRAQSYDTW-V 743
Query: 667 NILVEALEGKLS 678
+ + EAL +
Sbjct: 744 SRVTEALSANFN 755
Score = 155 (59.6 bits), Expect = 2.1e-84, Sum P(2) = 2.1e-84
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EEF D L +I IRP AE GIC+I PP W+PP + K S F R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVK----SFRFTPR 73
Query: 205 VQRVDKLQNRNSMR 218
VQR+++L+ +R
Sbjct: 74 VQRLNELEAMTRVR 87
Score = 137 (53.3 bits), Expect = 9.0e-16, Sum P(2) = 9.0e-16
Identities = 44/156 (28%), Positives = 67/156 (42%)
Query: 530 GRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDME 589
GR+ ++H + L R V +H EL + K +D D G ++ K L + E
Sbjct: 595 GRQC-VNHYRRL---RRHCVFSHEEL--IFKMAADP-ECLDV-GLAAMVCKELTLMTEEE 646
Query: 590 RARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNF 647
RE + M E F+ ER+CS C LSA+ C C+ +R CL H +
Sbjct: 647 TRLRESVVQMGVLMSEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 706
Query: 648 CSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRW 683
C C K YRY +L L+ ++ + + W
Sbjct: 707 CPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTW 742
>UNIPROTKB|E9PSM3 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005737 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 IPI:IPI00365351
Ensembl:ENSRNOT00000034548 NextBio:665124 ArrayExpress:E9PSM3
Uniprot:E9PSM3
Length = 1690
Score = 736 (264.1 bits), Expect = 2.7e-84, Sum P(2) = 2.7e-84
Identities = 179/432 (41%), Positives = 239/432 (55%)
Query: 260 ERFGFEPG-PAFTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FK+ YF N V H P E +E E
Sbjct: 350 EAFGFEQAIREYTLQSFGEMADNFKSDYF------------NMPV---HMVP-TELVEKE 393
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFP-KTLNQVGSASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP K + +E Y SGWNLNN P L
Sbjct: 394 FWRLVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMPVLEQ 453
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DISG+ VPWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVP A +
Sbjct: 454 SVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQ 513
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE MR+ +LFE QPDLLH+LVT ++P++L G+PVYR Q AGEFV+TFPRAYHSG
Sbjct: 514 LEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSG 573
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAARE--------AV 549
FN G+N AEAVN DWLP G+ + YR R SH++L+ A + A
Sbjct: 574 FNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAA 633
Query: 550 RAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNF 609
EL L+ T + R ++ + G++ ++ V E S+ +T S
Sbjct: 634 MVCKELTLM---TEEETRLRESVVQMGVVMS--EEEVFELVPDDERQCSACRTTCFLSAL 688
Query: 610 DATSERECSVCLFDLHLSAVGCHCSSDRYACLIHA---KNFCSCAWGSKFFLYRYDTSEL 666
+ E VCL+ H + + C C CL + ++ S +G K YDT +
Sbjct: 689 TCSCNPERLVCLY--HPTDL-CSCPMQN-KCLRYRYPLEDLPSLLYGVKVRAQSYDTW-V 743
Query: 667 NILVEALEGKLS 678
N + EAL +
Sbjct: 744 NRVTEALSASFN 755
Score = 152 (58.6 bits), Expect = 2.7e-84, Sum P(2) = 2.7e-84
Identities = 32/74 (43%), Positives = 43/74 (58%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EEF D L +I IRP AE GIC+I PP W+PP + K F R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKTF----RFTPR 73
Query: 205 VQRVDKLQNRNSMR 218
VQR+++L+ +R
Sbjct: 74 VQRLNELEAMTRVR 87
Score = 145 (56.1 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 48/167 (28%), Positives = 74/167 (44%)
Query: 530 GRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDME 589
GR+ ++H + L R V +H EL + K +D D G ++ K L + E
Sbjct: 595 GRQC-VNHYRRL---RRHCVFSHEEL--IFKMAADP-ECLDV-GLAAMVCKELTLMTEEE 646
Query: 590 RARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNF 647
RE + M E F+ ER+CS C LSA+ C C+ +R CL H +
Sbjct: 647 TRLRESVVQMGVVMSEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 706
Query: 648 CSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA-RLDLGLALS 693
CSC +K YRY +L L+ ++ + + W R+ L+ S
Sbjct: 707 CSCPMQNKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVNRVTEALSAS 753
>UNIPROTKB|E2R0S2 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ISWQGRA EMBL:AAEX03026384
Ensembl:ENSCAFT00000025665 Uniprot:E2R0S2
Length = 1520
Score = 727 (261.0 bits), Expect = 5.4e-84, Sum P(2) = 5.4e-84
Identities = 172/388 (44%), Positives = 223/388 (57%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FKA YF N V H P E +E E
Sbjct: 381 EAFGFEQATREYTLQSFGEMADSFKADYF------------NMPV---HMVP-TELVEKE 424
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + N+ + +E Y SGWNLN P L
Sbjct: 425 FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDNKRHLTPEEEEYATSGWNLNVMPVLEQ 484
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A
Sbjct: 485 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEH 544
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M+K +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 545 LEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 604
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 605 FNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNL 662
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSS-QTMKMESN--FDAT 612
+ ++ L KAL ++ + ER E L Q +K ++ A
Sbjct: 663 AAAVHKEMFIMVQ---EERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSAL 719
Query: 613 SERECS---VCLFDLHLSAVGCHCSSDR 637
+ +C VCL H++ + C CSS R
Sbjct: 720 ACYDCPDGLVCLS--HINDL-CKCSSSR 744
Score = 156 (60.0 bits), Expect = 5.4e-84, Sum P(2) = 5.4e-84
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EF+D L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQNRNSMR 218
+QR+++L+ + ++
Sbjct: 69 IQRLNELEAQTRVK 82
Score = 122 (48.0 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 33/113 (29%), Positives = 48/113 (42%)
Query: 578 LAKALKKR----VDMERARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGC 631
LA A+ K V ER R+ L T F+ ER+C C LSA+ C
Sbjct: 662 LAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALAC 721
Query: 632 HCSSDRYACLIHAKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
+ D CL H + C C+ ++ YRY EL ++ L+ + + WA
Sbjct: 722 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA 774
Score = 47 (21.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 515 WLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKN 561
W ++A+E+ E GRK S+ + L ARE + EL KN
Sbjct: 773 WANKVRVALEV--EDGRKRSLEELRALESEARERRFPNSELLQRLKN 817
>UNIPROTKB|Q38JA7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 KO:K11446 EMBL:DQ223016 RefSeq:NP_001041497.1
UniGene:Cfa.46487 ProteinModelPortal:Q38JA7 SMR:Q38JA7 PRIDE:Q38JA7
GeneID:491894 KEGG:cfa:491894 CTD:8242 InParanoid:Q38JA7
OrthoDB:EOG4894KP NextBio:20864597 Uniprot:Q38JA7
Length = 1556
Score = 727 (261.0 bits), Expect = 6.1e-84, Sum P(2) = 6.1e-84
Identities = 172/388 (44%), Positives = 223/388 (57%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FKA YF N V H P E +E E
Sbjct: 381 EAFGFEQATREYTLQSFGEMADSFKADYF------------NMPV---HMVP-TELVEKE 424
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + N+ + +E Y SGWNLN P L
Sbjct: 425 FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDNKRHLTPEEEEYATSGWNLNVMPVLEQ 484
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A
Sbjct: 485 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEH 544
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M+K +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 545 LEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 604
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 605 FNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNL 662
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSS-QTMKMESN--FDAT 612
+ ++ L KAL ++ + ER E L Q +K ++ A
Sbjct: 663 AAAVHKEMFIMVQ---EERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSAL 719
Query: 613 SERECS---VCLFDLHLSAVGCHCSSDR 637
+ +C VCL H++ + C CSS R
Sbjct: 720 ACYDCPDGLVCLS--HINDL-CKCSSSR 744
Score = 156 (60.0 bits), Expect = 6.1e-84, Sum P(2) = 6.1e-84
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EF+D L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQNRNSMR 218
+QR+++L+ + ++
Sbjct: 69 IQRLNELEAQTRVK 82
Score = 122 (48.0 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 33/113 (29%), Positives = 48/113 (42%)
Query: 578 LAKALKKR----VDMERARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGC 631
LA A+ K V ER R+ L T F+ ER+C C LSA+ C
Sbjct: 662 LAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALAC 721
Query: 632 HCSSDRYACLIHAKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
+ D CL H + C C+ ++ YRY EL ++ L+ + + WA
Sbjct: 722 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA 774
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 515 WLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKN 561
W ++A+E+ E GRK S+ + L ARE + EL KN
Sbjct: 773 WANKVRVALEV--EDGRKRSLEELRALESEARERRFPNSELLQRLKN 817
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDE 360
+P E +E + R+ E E +LE G G P+TL GS S +
Sbjct: 1468 DPAREELEPK--RVRSSGPEAEEAQEEEELEEETGGEGPPQTLPTTGSPSTQ 1517
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 734 (263.4 bits), Expect = 9.1e-84, Sum P(3) = 9.1e-84
Identities = 148/291 (50%), Positives = 188/291 (64%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL TF + AD FK+ YF N V H P E +E E
Sbjct: 298 EAFGFEQAARDYTLRTFGEMADAFKSDYF------------NMPV---HMVP-TELVEKE 341
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP ++ S +E Y+ SGWNLNN P +
Sbjct: 342 FWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQ 401
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DI G+ +PWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVPG A +
Sbjct: 402 SVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQ 461
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LE M+K +LF QPDLLH+LVT ++P+ L + +PVYR Q AGEFV+TFPRAYHSG
Sbjct: 462 LENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSG 521
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREA 548
FN GFN AEAVN VDWLP G+ +E YR R SHD+++ A +A
Sbjct: 522 FNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKA 572
Score = 130 (50.8 bits), Expect = 9.1e-84, Sum P(3) = 9.1e-84
Identities = 37/131 (28%), Positives = 63/131 (48%)
Query: 575 DGILAKALKK----RVDMERARREFLSSSS--QTMKMESNFDATSERECSVCLFDLHLSA 628
D ++A ++K ++ E+A RE + + +M+ ER+C C +SA
Sbjct: 576 DVVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCIKCKTTCFMSA 635
Query: 629 VGCHCSSDRYACLIHAKNFCSCAWGSKFFL-YRYDTSELNILVEALEGKLSAVYRWARLD 687
+ C C CL H K CSC K+ L YRY +L ++ AL+ + + WA L+
Sbjct: 636 ISCSCKPGLLVCLHHVKELCSCP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA-LN 693
Query: 688 LGLALSSFISR 698
+ AL + I++
Sbjct: 694 VNEALEAKINK 704
Score = 40 (19.1 bits), Expect = 9.1e-84, Sum P(3) = 9.1e-84
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 184 WKPP--CPLKEKPIWDSSTFVTRVQRVDKLQNRNSMR 218
W+PP C + D F R+QR+++L+ + ++
Sbjct: 2 WQPPFACDV------DKLHFTPRIQRLNELEAQTRVK 32
>UNIPROTKB|D4A3B4 [details] [associations]
symbol:D4A3B4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00949627
Ensembl:ENSRNOT00000067288 ArrayExpress:D4A3B4 Uniprot:D4A3B4
Length = 1490
Score = 724 (259.9 bits), Expect = 1.3e-83, Sum P(2) = 1.3e-83
Identities = 168/387 (43%), Positives = 223/387 (57%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FKA YF N V H P E +E E
Sbjct: 340 EAFGFEQATREYTLQSFGEMADSFKADYF------------NMPV---HMVP-TELVEKE 383
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + ++ + +E Y SGWNLN P L
Sbjct: 384 FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQ 443
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A
Sbjct: 444 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEH 503
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M+K +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 504 LEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 563
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 564 FNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNL 621
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNFDATSEREC 617
+ ++ L KAL ++ + A+R+ L + + +++ N T
Sbjct: 622 AAAVHKEMFIMVQ---EERRLRKALLEK-GLSEAKRQGLKTEPKDVRLCINCVTTEMMSA 677
Query: 618 SVC-----LFDL--HLSAVGCHCSSDR 637
+ C +F L H + + C CSS R
Sbjct: 678 NPCFVKPFVFILISHXNGL-CKCSSSR 703
Score = 155 (59.6 bits), Expect = 1.3e-83, Sum P(2) = 1.3e-83
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EF+D L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQ 212
+QR+++L+
Sbjct: 69 IQRLNELE 76
Score = 73 (30.8 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 20/96 (20%), Positives = 36/96 (37%)
Query: 590 RARREFLSSS-SQTMKMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNFC 648
R R+ L S+ + + R C C+ +SA C + + H C
Sbjct: 638 RLRKALLEKGLSEAKRQGLKTEPKDVRLCINCVTTEMMSANPCFVKPFVFILISHXNGLC 697
Query: 649 SCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
C+ ++ RY EL ++ L+ + + WA
Sbjct: 698 KCSSSRQYLRSRYTLDELPAMLHKLKVRAESFDTWA 733
Score = 48 (22.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 515 WLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKN 561
W ++A+E+ E GRK S+ + L ARE + EL KN
Sbjct: 732 WATKVRVALEV--EDGRKRSLEELRALESEARERRFPNSELLQRLKN 776
>MGI|MGI:99781 [details] [associations]
symbol:Kdm5c "lysine (K)-specific demethylase 5C"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99781 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0032453
KO:K11446 CTD:8242 OrthoDB:EOG4894KP ChiTaRS:KDM5C EMBL:AF127245
EMBL:AK008105 EMBL:AK155279 EMBL:AK155427 EMBL:AK155651
EMBL:AK158340 EMBL:AK011577 EMBL:BC043096 EMBL:BC054550 EMBL:Z29651
EMBL:AK129096 EMBL:L29563 EMBL:AF039894 IPI:IPI00112611
IPI:IPI00221399 IPI:IPI00776021 PIR:I48775 PIR:I84689
RefSeq:NP_038696.2 UniGene:Mm.142655 ProteinModelPortal:P41230
SMR:P41230 STRING:P41230 PhosphoSite:P41230 PaxDb:P41230
PRIDE:P41230 Ensembl:ENSMUST00000082177 Ensembl:ENSMUST00000112584
Ensembl:ENSMUST00000112588 GeneID:20591 KEGG:mmu:20591
UCSC:uc009uqc.2 UCSC:uc009uqd.2 UCSC:uc009uqe.2 InParanoid:P41230
NextBio:298901 Bgee:P41230 Genevestigator:P41230
GermOnline:ENSMUSG00000025332 Uniprot:P41230
Length = 1554
Score = 722 (259.2 bits), Expect = 2.1e-83, Sum P(2) = 2.1e-83
Identities = 171/388 (44%), Positives = 223/388 (57%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FKA YF N V H P E +E E
Sbjct: 381 EAFGFEQATREYTLQSFGEMADSFKADYF------------NMPV---HMVP-TELVEKE 424
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + ++ + +E Y SGWNLN P L
Sbjct: 425 FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQ 484
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A
Sbjct: 485 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEH 544
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M+K +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 545 LEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 604
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 605 FNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNL 662
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSS-QTMKMESN--FDAT 612
+ ++ L KAL ++ + ER E L Q +K ++ A
Sbjct: 663 AAAVHKEMFIMVQ---EERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSAL 719
Query: 613 SERECS---VCLFDLHLSAVGCHCSSDR 637
+ +C VCL H++ + C CSS R
Sbjct: 720 ACYDCPDGLVCLS--HINDL-CKCSSSR 744
Score = 156 (60.0 bits), Expect = 2.1e-83, Sum P(2) = 2.1e-83
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EF+D L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQNRNSMR 218
+QR+++L+ + ++
Sbjct: 69 IQRLNELEAQTRVK 82
Score = 122 (48.0 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 33/113 (29%), Positives = 48/113 (42%)
Query: 578 LAKALKKR----VDMERARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGC 631
LA A+ K V ER R+ L T F+ ER+C C LSA+ C
Sbjct: 662 LAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALAC 721
Query: 632 HCSSDRYACLIHAKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
+ D CL H + C C+ ++ YRY EL ++ L+ + + WA
Sbjct: 722 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA 774
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 515 WLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKN 561
W ++A+E+ E GRK S+ + L ARE + EL KN
Sbjct: 773 WANKVRVALEV--EDGRKRSLEELRALESEARERRFPNSELLQRLKN 817
>UNIPROTKB|F1MYV2 [details] [associations]
symbol:KDM5C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 KO:K11446 CTD:8242
OMA:ISWQGRA EMBL:DAAA02073278 IPI:IPI00703369 RefSeq:NP_776610.2
UniGene:Bt.8145 PRIDE:F1MYV2 Ensembl:ENSBTAT00000019893
GeneID:281490 KEGG:bta:281490 NextBio:20805465 ArrayExpress:F1MYV2
Uniprot:F1MYV2
Length = 1555
Score = 722 (259.2 bits), Expect = 2.1e-83, Sum P(2) = 2.1e-83
Identities = 171/388 (44%), Positives = 223/388 (57%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FKA YF N V H P E +E E
Sbjct: 381 EAFGFEQATREYTLQSFGEMADSFKADYF------------NMPV---HMVP-TELVEKE 424
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + ++ + +E Y SGWNLN P L
Sbjct: 425 FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQ 484
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A
Sbjct: 485 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEH 544
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M+K +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 545 LEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 604
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 605 FNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNL 662
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSS-QTMKMESN--FDAT 612
+ ++ L KAL ++ + ER E L Q +K ++ A
Sbjct: 663 AAAVHKEMFIMVQ---EERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSAL 719
Query: 613 SERECS---VCLFDLHLSAVGCHCSSDR 637
+ +C VCL H++ + C CSS R
Sbjct: 720 ACYDCPDGLVCLS--HINDL-CKCSSSR 744
Score = 156 (60.0 bits), Expect = 2.1e-83, Sum P(2) = 2.1e-83
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EF+D L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQNRNSMR 218
+QR+++L+ + ++
Sbjct: 69 IQRLNELEAQTRVK 82
Score = 122 (48.0 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 33/113 (29%), Positives = 48/113 (42%)
Query: 578 LAKALKKR----VDMERARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGC 631
LA A+ K V ER R+ L T F+ ER+C C LSA+ C
Sbjct: 662 LAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALAC 721
Query: 632 HCSSDRYACLIHAKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
+ D CL H + C C+ ++ YRY EL ++ L+ + + WA
Sbjct: 722 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA 774
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 515 WLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKN 561
W ++A+E+ E GRK S+ + L ARE + EL KN
Sbjct: 773 WANKVRVALEV--EDGRKRSLEELRALESEARERRFPNSELLQRLKN 817
>UNIPROTKB|B0QZ44 [details] [associations]
symbol:KDM5C "Smcy homolog, X-linked (Mouse), isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:CH471154 EMBL:AL139396 HOGENOM:HOG000290719
UniGene:Hs.631768 HGNC:HGNC:11114 ChiTaRS:KDM5C IPI:IPI00879547
SMR:B0QZ44 Ensembl:ENST00000404049 UCSC:uc004dsa.3
HOVERGEN:HBG068574 Uniprot:B0QZ44
Length = 1559
Score = 722 (259.2 bits), Expect = 2.1e-83, Sum P(2) = 2.1e-83
Identities = 171/388 (44%), Positives = 223/388 (57%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FKA YF N V H P E +E E
Sbjct: 380 EAFGFEQATREYTLQSFGEMADSFKADYF------------NMPV---HMVP-TELVEKE 423
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + ++ + +E Y SGWNLN P L
Sbjct: 424 FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQ 483
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A
Sbjct: 484 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEH 543
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M+K +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 544 LEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 603
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 604 FNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNL 661
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSS-QTMKMESN--FDAT 612
+ ++ L KAL ++ + ER E L Q +K ++ A
Sbjct: 662 AAAVHKEMFIMVQ---EERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSAL 718
Query: 613 SERECS---VCLFDLHLSAVGCHCSSDR 637
+ +C VCL H++ + C CSS R
Sbjct: 719 ACYDCPDGLVCLS--HINDL-CKCSSSR 743
Score = 156 (60.0 bits), Expect = 2.1e-83, Sum P(2) = 2.1e-83
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EF+D L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQNRNSMR 218
+QR+++L+ + ++
Sbjct: 69 IQRLNELEAQTRVK 82
Score = 122 (48.0 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 33/113 (29%), Positives = 48/113 (42%)
Query: 578 LAKALKKR----VDMERARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGC 631
LA A+ K V ER R+ L T F+ ER+C C LSA+ C
Sbjct: 661 LAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALAC 720
Query: 632 HCSSDRYACLIHAKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
+ D CL H + C C+ ++ YRY EL ++ L+ + + WA
Sbjct: 721 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA 773
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 515 WLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKN 561
W ++A+E+ E GRK S+ + L ARE + EL KN
Sbjct: 772 WANKVRVALEV--EDGRKRSLEELRALESEARERRFPNSELLQQLKN 816
Score = 41 (19.5 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDE 360
+P E +E + R+ E EV +LE G G P + GS S +
Sbjct: 1470 DPAREELEPK--RVRSSGPEAEEVQEEEELEEETGGEGPPAPIPTTGSPSTQ 1519
>UNIPROTKB|P41229 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AL139396
eggNOG:NOG327026 GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719
CTD:8242 OrthoDB:EOG4894KP EMBL:L25270 EMBL:AK304732 EMBL:BC054499
EMBL:Z29650 IPI:IPI00013185 IPI:IPI00219412 IPI:IPI00640875
IPI:IPI01012687 PIR:I54361 RefSeq:NP_001140174.1 RefSeq:NP_004178.2
UniGene:Hs.631768 PDB:2JRZ PDBsum:2JRZ ProteinModelPortal:P41229
SMR:P41229 DIP:DIP-39663N IntAct:P41229 STRING:P41229
PhosphoSite:P41229 DMDM:117949812 PaxDb:P41229 PRIDE:P41229
DNASU:8242 Ensembl:ENST00000375379 Ensembl:ENST00000375383
Ensembl:ENST00000375401 Ensembl:ENST00000452825 GeneID:8242
KEGG:hsa:8242 UCSC:uc004drz.3 GeneCards:GC0XM053237 HGNC:HGNC:11114
MIM:300534 MIM:314690 neXtProt:NX_P41229 Orphanet:85279
PharmGKB:PA35964 InParanoid:P41229 OMA:ISWQGRA PhylomeDB:P41229
ChiTaRS:KDM5C EvolutionaryTrace:P41229 GenomeRNAi:8242
NextBio:31002 ArrayExpress:P41229 Bgee:P41229 CleanEx:HS_JARID1C
Genevestigator:P41229 GermOnline:ENSG00000126012 Uniprot:P41229
Length = 1560
Score = 722 (259.2 bits), Expect = 2.1e-83, Sum P(2) = 2.1e-83
Identities = 171/388 (44%), Positives = 223/388 (57%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FKA YF N V H P E +E E
Sbjct: 381 EAFGFEQATREYTLQSFGEMADSFKADYF------------NMPV---HMVP-TELVEKE 424
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + ++ + +E Y SGWNLN P L
Sbjct: 425 FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQ 484
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A
Sbjct: 485 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEH 544
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M+K +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 545 LEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 604
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 605 FNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNL 662
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSS-QTMKMESN--FDAT 612
+ ++ L KAL ++ + ER E L Q +K ++ A
Sbjct: 663 AAAVHKEMFIMVQ---EERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSAL 719
Query: 613 SERECS---VCLFDLHLSAVGCHCSSDR 637
+ +C VCL H++ + C CSS R
Sbjct: 720 ACYDCPDGLVCLS--HINDL-CKCSSSR 744
Score = 156 (60.0 bits), Expect = 2.1e-83, Sum P(2) = 2.1e-83
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EF+D L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQNRNSMR 218
+QR+++L+ + ++
Sbjct: 69 IQRLNELEAQTRVK 82
Score = 122 (48.0 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 33/113 (29%), Positives = 48/113 (42%)
Query: 578 LAKALKKR----VDMERARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGC 631
LA A+ K V ER R+ L T F+ ER+C C LSA+ C
Sbjct: 662 LAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALAC 721
Query: 632 HCSSDRYACLIHAKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
+ D CL H + C C+ ++ YRY EL ++ L+ + + WA
Sbjct: 722 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA 774
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 515 WLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKN 561
W ++A+E+ E GRK S+ + L ARE + EL KN
Sbjct: 773 WANKVRVALEV--EDGRKRSLEELRALESEARERRFPNSELLQQLKN 817
Score = 41 (19.5 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDE 360
+P E +E + R+ E EV +LE G G P + GS S +
Sbjct: 1471 DPAREELEPK--RVRSSGPEAEEVQEEEELEEETGGEGPPAPIPTTGSPSTQ 1520
>UNIPROTKB|K7GNM7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:FP102491
Ensembl:ENSSSCT00000032687 Uniprot:K7GNM7
Length = 1560
Score = 722 (259.2 bits), Expect = 2.1e-83, Sum P(2) = 2.1e-83
Identities = 171/388 (44%), Positives = 223/388 (57%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FKA YF N V H P E +E E
Sbjct: 381 EAFGFEQATREYTLQSFGEMADSFKADYF------------NMPV---HMVP-TELVEKE 424
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + ++ + +E Y SGWNLN P L
Sbjct: 425 FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQ 484
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A
Sbjct: 485 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEH 544
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M+K +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 545 LEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 604
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 605 FNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNL 662
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSS-QTMKMESN--FDAT 612
+ ++ L KAL ++ + ER E L Q +K ++ A
Sbjct: 663 AAAVHKEMFIMVQ---EERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSAL 719
Query: 613 SERECS---VCLFDLHLSAVGCHCSSDR 637
+ +C VCL H++ + C CSS R
Sbjct: 720 ACYDCPDGLVCLS--HINDL-CKCSSSR 744
Score = 156 (60.0 bits), Expect = 2.1e-83, Sum P(2) = 2.1e-83
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EF+D L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQNRNSMR 218
+QR+++L+ + ++
Sbjct: 69 IQRLNELEAQTRVK 82
Score = 122 (48.0 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 33/113 (29%), Positives = 48/113 (42%)
Query: 578 LAKALKKR----VDMERARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGC 631
LA A+ K V ER R+ L T F+ ER+C C LSA+ C
Sbjct: 662 LAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALAC 721
Query: 632 HCSSDRYACLIHAKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
+ D CL H + C C+ ++ YRY EL ++ L+ + + WA
Sbjct: 722 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA 774
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 515 WLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKN 561
W ++A+E+ E GRK S+ + L ARE + EL KN
Sbjct: 773 WANKVRVALEV--EDGRKRSLEELRALESEARERRFPNSELLQRLKN 817
Score = 41 (19.5 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDE 360
+P E +E + R+ E E +LE G G P+ L GS S +
Sbjct: 1471 DPAREELEPK--RVRSSGPEAEEAQEEEELEEETGGEGPPQPLPATGSPSTQ 1520
>UNIPROTKB|F1RUI7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 OMA:ISWQGRA
EMBL:FP102491 Ensembl:ENSSSCT00000013473 ArrayExpress:F1RUI7
Uniprot:F1RUI7
Length = 1516
Score = 722 (259.2 bits), Expect = 2.3e-83, Sum P(2) = 2.3e-83
Identities = 171/388 (44%), Positives = 223/388 (57%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FKA YF N V H P E +E E
Sbjct: 340 EAFGFEQATREYTLQSFGEMADSFKADYF------------NMPV---HMVP-TELVEKE 383
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + ++ + +E Y SGWNLN P L
Sbjct: 384 FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQ 443
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A
Sbjct: 444 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEH 503
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M+K +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 504 LEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 563
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 564 FNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNL 621
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSS-QTMKMESN--FDAT 612
+ ++ L KAL ++ + ER E L Q +K ++ A
Sbjct: 622 AAAVHKEMFIMVQ---EERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSAL 678
Query: 613 SERECS---VCLFDLHLSAVGCHCSSDR 637
+ +C VCL H++ + C CSS R
Sbjct: 679 ACYDCPDGLVCLS--HINDL-CKCSSSR 703
Score = 155 (59.6 bits), Expect = 2.3e-83, Sum P(2) = 2.3e-83
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EF+D L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQ 212
+QR+++L+
Sbjct: 69 IQRLNELE 76
Score = 122 (48.0 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 33/113 (29%), Positives = 48/113 (42%)
Query: 578 LAKALKKR----VDMERARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGC 631
LA A+ K V ER R+ L T F+ ER+C C LSA+ C
Sbjct: 621 LAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALAC 680
Query: 632 HCSSDRYACLIHAKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
+ D CL H + C C+ ++ YRY EL ++ L+ + + WA
Sbjct: 681 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA 733
Score = 47 (21.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 515 WLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKN 561
W ++A+E+ E GRK S+ + L ARE + EL KN
Sbjct: 732 WANKVRVALEV--EDGRKRSLEELRALESEARERRFPNSELLQRLKN 776
Score = 41 (19.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDE 360
+P E +E + R+ E E +LE G G P+ L GS S +
Sbjct: 1427 DPAREELEPK--RVRSSGPEAEEAQEEEELEEETGGEGPPQPLPATGSPSTQ 1476
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 740 (265.6 bits), Expect = 3.0e-83, Sum P(2) = 3.0e-83
Identities = 177/429 (41%), Positives = 241/429 (56%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FK+ YF N V H P E +E E
Sbjct: 353 EAFGFEQAVREYTLQSFGEMADNFKSDYF------------NMPV---HMVP-TELVEKE 396
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFP-KTLNQVGSASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP K + +E Y SGWNLNN P L
Sbjct: 397 FWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKLMPEEEDYALSGWNLNNMPILEQ 456
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DISG+ VPWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVP A +
Sbjct: 457 SVLAHINADISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQ 516
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LE+ M++ +LFE QPDLLH+LVT ++P++L G+PVYR Q AGEFV+TFPRAYHSG
Sbjct: 517 LEDVMKELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSG 576
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLL--LGAAREAVRAHWEL 555
FN G+N AEAVN DWLP G+ + YR GR SH++L+ + A E +
Sbjct: 577 FNQGYNFAEAVNFCTADWLPIGRQCVSHYRRLGRHCVFSHEELIFKMAADPECLDVGLAA 636
Query: 556 NLLKKNT---SDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNFDAT 612
+ K+ T + R ++ + G+L ++ V E ++ +T S +
Sbjct: 637 MVCKEMTLMIEEETRLRETVVQMGVLMS--EEEVFELVPDDERQCTACRTTCFLSALTCS 694
Query: 613 SERECSVCLFDLHLSAVGCHCSSDRYACLIHA---KNFCSCAWGSKFFLYRYDTSELNIL 669
E VCL+ H S + C C CL + ++ S +G K YDT ++ +
Sbjct: 695 CNPERLVCLY--HPSDL-CPCPMQN-KCLRYRYPLEDLPSLLYGVKVRAQSYDTW-VSRV 749
Query: 670 VEALEGKLS 678
EAL L+
Sbjct: 750 TEALSANLN 758
Score = 141 (54.7 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 43/156 (27%), Positives = 69/156 (44%)
Query: 530 GRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDME 589
GR+ +SH + L R V +H EL + K +D D G ++ K + ++ E
Sbjct: 598 GRQC-VSHYRRL---GRHCVFSHEEL--IFKMAADP-ECLDV-GLAAMVCKEMTLMIEEE 649
Query: 590 RARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNF 647
RE + M E F+ ER+C+ C LSA+ C C+ +R CL H +
Sbjct: 650 TRLRETVVQMGVLMSEEEVFELVPDDERQCTACRTTCFLSALTCSCNPERLVCLYHPSDL 709
Query: 648 CSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRW 683
C C +K YRY +L L+ ++ + + W
Sbjct: 710 CPCPMQNKCLRYRYPLEDLPSLLYGVKVRAQSYDTW 745
Score = 138 (53.6 bits), Expect = 3.0e-83, Sum P(2) = 3.0e-83
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EEF D L +I IR AE GIC+I PP W+PP + + S F R
Sbjct: 22 ECPVFEPSWEEFSDPLGFIGRIRGLAEKTGICKIRPPKDWQPPFACEVQ----SFRFTPR 77
Query: 205 VQRVDKLQ 212
+QR+++L+
Sbjct: 78 IQRLNELE 85
>UNIPROTKB|Q9BY66 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0007283 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 DrugBank:DB00126
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:CH471202 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:U52191 EMBL:D87072 EMBL:AF273841 EMBL:AC010889
EMBL:BC132721 EMBL:BC144102 EMBL:BC146767 EMBL:U52365 EMBL:AF134849
IPI:IPI00219940 IPI:IPI00329577 IPI:IPI00922879
RefSeq:NP_001140177.1 RefSeq:NP_001140178.1 RefSeq:NP_004644.2
UniGene:Hs.80358 PDB:2E6R PDB:2YQE PDBsum:2E6R PDBsum:2YQE
ProteinModelPortal:Q9BY66 SMR:Q9BY66 IntAct:Q9BY66 STRING:Q9BY66
PhosphoSite:Q9BY66 DMDM:17368706 PaxDb:Q9BY66 PRIDE:Q9BY66
Ensembl:ENST00000317961 Ensembl:ENST00000382806
Ensembl:ENST00000541639 GeneID:8284 KEGG:hsa:8284 UCSC:uc004fug.3
UCSC:uc010nwy.3 GeneCards:GC0YM021865 HGNC:HGNC:11115 MIM:426000
neXtProt:NX_Q9BY66 PharmGKB:PA35965 InParanoid:Q9BY66 OMA:TEMVERE
PhylomeDB:Q9BY66 ChiTaRS:KDM5D EvolutionaryTrace:Q9BY66
GenomeRNAi:8284 NextBio:31049 ArrayExpress:Q9BY66 Bgee:Q9BY66
CleanEx:HS_JARID1D Genevestigator:Q9BY66 GermOnline:ENSG00000012817
Uniprot:Q9BY66
Length = 1539
Score = 712 (255.7 bits), Expect = 7.0e-83, Sum P(2) = 7.0e-83
Identities = 168/388 (43%), Positives = 224/388 (57%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE ++L +F + AD FK+ YF N V H P E +E E
Sbjct: 371 EAFGFEQATQEYSLQSFGEMADSFKSDYF------------NMPV---HMVP-TELVEKE 414
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDER-YIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + ++ + +E+ Y SGWNLN P L
Sbjct: 415 FWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLDQ 474
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A
Sbjct: 475 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEH 534
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M+ +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 535 LEEVMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 594
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 595 FNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--AFPETLDLNL 652
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSS-QTMKMESN--FDAT 612
+ + ++ L KAL ++ + ER E L Q +K ++ A
Sbjct: 653 A---VAVHKEMFIMVQEERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCFLSAL 709
Query: 613 SERECS---VCLFDLHLSAVGCHCSSDR 637
+ +C VCL H++ + C CSS R
Sbjct: 710 ACYDCPDGLVCLS--HINDL-CKCSSSR 734
Score = 161 (61.7 bits), Expect = 7.0e-83, Sum P(2) = 7.0e-83
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EFQD L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQNRNSMR 218
VQR+++L+ + ++
Sbjct: 69 VQRLNELEAQTRVK 82
Score = 121 (47.7 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 29/101 (28%), Positives = 43/101 (42%)
Query: 586 VDMERARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIH 643
V ER R+ L T F+ ER+C C LSA+ C+ D CL H
Sbjct: 664 VQEERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 723
Query: 644 AKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
+ C C+ ++ YRY EL ++ L+ + + WA
Sbjct: 724 INDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWA 764
Score = 45 (20.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 515 WLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKN 561
W ++A+E+ E GRK S + L ARE + EL KN
Sbjct: 763 WANKVRVALEV--EDGRKRSFEELRALESEARERRFPNSELLQRLKN 807
>UNIPROTKB|E9PFH2 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D IPI:IPI00644955
ProteinModelPortal:E9PFH2 SMR:E9PFH2 PRIDE:E9PFH2
Ensembl:ENST00000440077 ArrayExpress:E9PFH2 Bgee:E9PFH2
Uniprot:E9PFH2
Length = 1476
Score = 712 (255.7 bits), Expect = 7.1e-83, Sum P(2) = 7.1e-83
Identities = 168/388 (43%), Positives = 224/388 (57%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE ++L +F + AD FK+ YF N V H P E +E E
Sbjct: 330 EAFGFEQATQEYSLQSFGEMADSFKSDYF------------NMPV---HMVP-TELVEKE 373
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDER-YIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + ++ + +E+ Y SGWNLN P L
Sbjct: 374 FWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLDQ 433
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A
Sbjct: 434 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEH 493
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M+ +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 494 LEEVMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 553
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 554 FNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--AFPETLDLNL 611
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSS-QTMKMESN--FDAT 612
+ + ++ L KAL ++ + ER E L Q +K ++ A
Sbjct: 612 A---VAVHKEMFIMVQEERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCFLSAL 668
Query: 613 SERECS---VCLFDLHLSAVGCHCSSDR 637
+ +C VCL H++ + C CSS R
Sbjct: 669 ACYDCPDGLVCLS--HINDL-CKCSSSR 693
Score = 160 (61.4 bits), Expect = 7.1e-83, Sum P(2) = 7.1e-83
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EFQD L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQ 212
VQR+++L+
Sbjct: 69 VQRLNELE 76
Score = 121 (47.7 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 29/101 (28%), Positives = 43/101 (42%)
Query: 586 VDMERARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIH 643
V ER R+ L T F+ ER+C C LSA+ C+ D CL H
Sbjct: 623 VQEERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 682
Query: 644 AKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
+ C C+ ++ YRY EL ++ L+ + + WA
Sbjct: 683 INDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWA 723
Score = 45 (20.9 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 515 WLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKN 561
W ++A+E+ E GRK S + L ARE + EL KN
Sbjct: 722 WANKVRVALEV--EDGRKRSFEELRALESEARERRFPNSELLQRLKN 766
>UNIPROTKB|A1YVX4 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
KO:K11446 CTD:8242 EMBL:EF139241 RefSeq:NP_001090902.1
UniGene:Ssc.25162 ProteinModelPortal:A1YVX4 SMR:A1YVX4
GeneID:100037295 KEGG:ssc:100037295 Uniprot:A1YVX4
Length = 1516
Score = 717 (257.5 bits), Expect = 8.1e-83, Sum P(2) = 8.1e-83
Identities = 170/388 (43%), Positives = 223/388 (57%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FKA Y +N V H P E +E E
Sbjct: 340 EAFGFEQATREYTLQSFGEMADSFKADY------------SNMPV---HMVP-TELVEKE 383
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + ++ + +E Y SGWNLN P L
Sbjct: 384 FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQ 443
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A
Sbjct: 444 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEH 503
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M+K +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 504 LEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 563
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 564 FNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNL 621
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSS-QTMKMESN--FDAT 612
+ ++ L KAL ++ + ER E L Q +K ++ A
Sbjct: 622 AAAVHKEMFIMVQ---EERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSAL 678
Query: 613 SERECS---VCLFDLHLSAVGCHCSSDR 637
+ +C VCL H++ + C CSS R
Sbjct: 679 ACYDCPDGLVCLS--HINDL-CKCSSSR 703
Score = 155 (59.6 bits), Expect = 8.1e-83, Sum P(2) = 8.1e-83
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EF+D L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQ 212
+QR+++L+
Sbjct: 69 IQRLNELE 76
Score = 122 (48.0 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 33/113 (29%), Positives = 48/113 (42%)
Query: 578 LAKALKKR----VDMERARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGC 631
LA A+ K V ER R+ L T F+ ER+C C LSA+ C
Sbjct: 621 LAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALAC 680
Query: 632 HCSSDRYACLIHAKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
+ D CL H + C C+ ++ YRY EL ++ L+ + + WA
Sbjct: 681 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA 733
Score = 47 (21.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 515 WLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKN 561
W ++A+E+ E GRK S+ + L ARE + EL KN
Sbjct: 732 WANKVRVALEV--EDGRKRSLEELRALESEARERRFPNSELLQRLKN 776
>ZFIN|ZDB-GENE-060810-94 [details] [associations]
symbol:kdm5c "lysine (K)-specific demethylase 5C"
species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-060810-94 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0043524 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 KO:K11446
HOGENOM:HOG000290719 CTD:8242 OMA:ISWQGRA HOVERGEN:HBG068574
EMBL:BX537348 IPI:IPI00611775 RefSeq:NP_001116706.1
UniGene:Dr.75967 SMR:B0S6L0 Ensembl:ENSDART00000098657
Ensembl:ENSDART00000127053 GeneID:553406 KEGG:dre:553406
NextBio:20880164 Uniprot:B0S6L0
Length = 1578
Score = 716 (257.1 bits), Expect = 1.0e-82, Sum P(2) = 1.0e-82
Identities = 169/385 (43%), Positives = 216/385 (56%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FKA YF N V H P E +E E
Sbjct: 415 EAFGFEQATREYTLQSFGEMADTFKADYF------------NMPV---HMVP-TELVEKE 458
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP + S +E Y +SGWNLN P L
Sbjct: 459 FWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNGKRQLSEEEEEYARSGWNLNVMPVLEQ 518
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
S+L + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A K
Sbjct: 519 SLLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPCSAAEK 578
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LEE M+K +LFE QPDLLH+LVT ++P+IL S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 579 LEEVMKKLTPELFEFQPDLLHQLVTIMNPNILMSHGVPVVRTNQCAGEFVITFPRAYHSG 638
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR+ R S ++L A A +LNL
Sbjct: 639 FNQGYNFAEAVNFCTADWLPTGRSCIEHYRQLRRYCVFSQEELTCKMA--ACPEKLDLNL 696
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSSQTMKMESNFDATSER 615
+ ++ L K+L +R + ER E L + S
Sbjct: 697 AAATHREMFI---IVQEERKLRKSLLERGIKEAEREAFELLPDDERQCDKCKTTCFLSAL 753
Query: 616 ECSVC---LFDLHLSAVGCHCSSDR 637
CS C L L+ + C C S++
Sbjct: 754 ACSNCPERLVCLYHAQDLCSCPSEK 778
Score = 156 (60.0 bits), Expect = 1.0e-82, Sum P(2) = 1.0e-82
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EEF D L YIA IRP AE GIC+I PP W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWEEFADPLGYIAKIRPIAEKSGICKIRPPPDWQPPFAVEV----DNFHFTPR 68
Query: 205 VQRVDKLQ 212
+QR+++L+
Sbjct: 69 IQRLNELE 76
Score = 123 (48.4 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 31/102 (30%), Positives = 47/102 (46%)
Query: 586 VDMERA-RREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLI 642
V ER R+ L + + E+ F+ ER+C C LSA+ C +R CL
Sbjct: 708 VQEERKLRKSLLERGIKEAEREA-FELLPDDERQCDKCKTTCFLSALACSNCPERLVCLY 766
Query: 643 HAKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
HA++ CSC + YRY EL ++ L+ + + WA
Sbjct: 767 HAQDLCSCPSEKLYLRYRYTLDELLAMLHRLKVRAESFDSWA 808
>MGI|MGI:99780 [details] [associations]
symbol:Kdm5d "lysine (K)-specific demethylase 5D"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99780 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:AF127244 EMBL:AK140971 EMBL:BC059077 EMBL:Z29652
IPI:IPI00123375 IPI:IPI00848809 IPI:IPI00848997 IPI:IPI00850747
PIR:I48776 RefSeq:NP_035549.1 UniGene:Mm.262676
ProteinModelPortal:Q62240 SMR:Q62240 STRING:Q62240
PhosphoSite:Q62240 PRIDE:Q62240 Ensembl:ENSMUST00000055032
GeneID:20592 KEGG:mmu:20592 UCSC:uc009uyz.1 UCSC:uc009uzb.1
InParanoid:Q62240 NextBio:298905 Bgee:Q62240 Genevestigator:Q62240
GermOnline:ENSMUSG00000056673 Uniprot:Q62240
Length = 1548
Score = 703 (252.5 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 165/386 (42%), Positives = 221/386 (57%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL +F + AD FKA YF N V H P E +E E
Sbjct: 380 EAFGFEQATQEYTLQSFGEMADSFKADYF------------NMPV---HMVP-TEVVEKE 423
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDER-YIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP ++ + +E+ Y GWNLN P L
Sbjct: 424 FWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWDLSPEEKEYAACGWNLNVMPVLDQ 483
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL + + DISG+ VPWLY+GM FS+FCWH+EDH YS+NY+HWG PK WYGVP A
Sbjct: 484 SVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEH 543
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LE+ M++ +LF+ QPDLLH+LVT ++P+ L S G+PV R Q AGEFV+TFPRAYHSG
Sbjct: 544 LEDVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSG 603
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNL 557
FN G+N AEAVN DWLP G+ IE YR R SH++L+ A A +LNL
Sbjct: 604 FNQGYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMA--AFPEKLDLNL 661
Query: 558 LKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARREFLSSSS-QTMKMESN--FDAT 612
+ + ++ L K L ++ + ER E L Q +K ++ A
Sbjct: 662 A---VAVHKEMFIMVQEERRLRKTLLEKGITEAEREAFELLPDDERQCIKCKTTCFLSAL 718
Query: 613 SERECSVCLFDL-HLSAVGCHCSSDR 637
+ +C L L H++ + C CS +R
Sbjct: 719 ACYDCPDSLVCLSHINDL-CKCSRNR 743
Score = 156 (60.0 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EF+D L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQNRNSMR 218
+QR+++L+ + ++
Sbjct: 69 IQRLNELEAQTRVK 82
Score = 124 (48.7 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 29/101 (28%), Positives = 44/101 (43%)
Query: 586 VDMERARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIH 643
V ER R+ L T F+ ER+C C LSA+ C+ D CL H
Sbjct: 673 VQEERRLRKTLLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDSLVCLSH 732
Query: 644 AKNFCSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRWA 684
+ C C+ ++ YRY EL +++ L+ + + WA
Sbjct: 733 INDLCKCSRNRQYLRYRYTLDELPAMLQKLKIRAESFDNWA 773
Score = 39 (18.8 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 15/52 (28%), Positives = 20/52 (38%)
Query: 256 CYEDERFGFEPGPAFTLNTFQKYADLFKAQ-YFSRDKNDAKGLGANTAVLEE 306
CY +P P T +K +L K Q Y + K GL A L +
Sbjct: 208 CYSRRGKRLQPEPEPTEEDIEKNPELKKLQIYGAGPKMIGLGLKAKEKTLRK 259
Score = 37 (18.1 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 658 LYRYDTSELNILVEALEGKLSAV 680
LY+YDT L + + L S +
Sbjct: 1121 LYKYDTELLGLSAQDLRDPGSVI 1143
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 734 (263.4 bits), Expect = 1.5e-82, Sum P(2) = 1.5e-82
Identities = 148/291 (50%), Positives = 188/291 (64%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE +TL TF + AD FK+ YF N V H P E +E E
Sbjct: 208 EAFGFEQAARDYTLRTFGEMADAFKSDYF------------NMPV---HMVP-TELVEKE 251
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG-SASDERYIKSGWNLNNFPRLPG 377
+WR+V E++ V YGAD+ + FGSGFP ++ S +E Y+ SGWNLNN P +
Sbjct: 252 FWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQ 311
Query: 378 SVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALK 437
SVL++ + DI G+ +PWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVPG A +
Sbjct: 312 SVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQ 371
Query: 438 LEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSG 497
LE M+K +LF QPDLLH+LVT ++P+ L + +PVYR Q AGEFV+TFPRAYHSG
Sbjct: 372 LENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSG 431
Query: 498 FNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREA 548
FN GFN AEAVN VDWLP G+ +E YR R SHD+++ A +A
Sbjct: 432 FNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKA 482
Score = 130 (50.8 bits), Expect = 1.5e-82, Sum P(2) = 1.5e-82
Identities = 37/131 (28%), Positives = 63/131 (48%)
Query: 575 DGILAKALKK----RVDMERARREFLSSSS--QTMKMESNFDATSERECSVCLFDLHLSA 628
D ++A ++K ++ E+A RE + + +M+ ER+C C +SA
Sbjct: 486 DVVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSA 545
Query: 629 VGCHCSSDRYACLIHAKNFCSCAWGSKFFL-YRYDTSELNILVEALEGKLSAVYRWARLD 687
+ C C CL H K CSC K+ L YRY +L ++ AL+ + + WA L+
Sbjct: 546 ISCSCKPGLLVCLHHVKELCSCP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA-LN 603
Query: 688 LGLALSSFISR 698
+ AL + I++
Sbjct: 604 VNEALEAKINK 614
>ASPGD|ASPL0000010243 [details] [associations]
symbol:AN8211 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0034630
"RITS complex localization" evidence=IEA] [GO:0031507
"heterochromatin assembly" evidence=IEA] [GO:0051572 "negative
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:BN001302 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 OrthoDB:EOG44N21B KO:K11446
EMBL:AACD01000143 RefSeq:XP_681480.1 ProteinModelPortal:Q5AU19
EnsemblFungi:CADANIAT00004258 GeneID:2869040 KEGG:ani:AN8211.2
HOGENOM:HOG000160061 OMA:HFGATKT Uniprot:Q5AU19
Length = 1717
Score = 704 (252.9 bits), Expect = 8.6e-82, Sum P(2) = 8.6e-82
Identities = 174/444 (39%), Positives = 234/444 (52%)
Query: 262 FGFEPGPAFTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGEYWR 321
FGFE G ++L FQ+ A+ FK YF+ L NT E +++E E+WR
Sbjct: 508 FGFEEGGVYSLKQFQEKANNFKKNYFASKMPFDPVL--NTRRRESE-----DDVEREFWR 560
Query: 322 IVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWNLNNFPRLPGSVLS 381
+VE TE +EV YGAD+ + GSGFP T+ + + D Y K WNLNN P S+
Sbjct: 561 LVESLTETVEVEYGADIHSTTHGSGFP-TVER--NPLDP-YSKDPWNLNNLPFHGESLFR 616
Query: 382 YESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEA 441
+ DISG+ VPW+Y+GMCFS+FCWH EDH+ YS NY H+GA K WYG+PG DA EEA
Sbjct: 617 HIKSDISGMTVPWVYVGMCFSTFCWHNEDHYAYSANYQHFGATKTWYGIPGADAEAFEEA 676
Query: 442 MRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCG 501
MR+ + +LFE QPDLL +LVT + P L+ G+ VY Q AG+FV+TFP+AYH+GFN G
Sbjct: 677 MRQAVPELFEGQPDLLFQLVTLMPPDQLRKAGVNVYALDQRAGQFVITFPQAYHAGFNHG 736
Query: 502 FNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLL-GAAREAV--RAHWELNLL 558
FN EAVN APVDW P G +E + R SHD+LL AAR+ A W L
Sbjct: 737 FNFNEAVNFAPVDWEPFGAAGVERLQAFRRHPCFSHDELLFTAAARDTSISTAKWLAPAL 796
Query: 559 KKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNF-----DATS 613
++ S L + AK ++ A S+ T + + F D
Sbjct: 797 QRTCSREL------AERASFAKRHQEATPHNCAL--LTDDSAPTGECQLGFLIEDKDLPE 848
Query: 614 ER-ECSVCLFDLHLSAVGCHCSSDRYACLIH--AKNFCSCAWGSKFF------LYRYDTS 664
E +C C + L+ CH S + CL+H A + C K YR +
Sbjct: 849 EDYQCHYCKAYIFLTQFKCH-KSGKTLCLVHLDAHDCCGEPLSKKLLGPDHTLRYRVSDT 907
Query: 665 ELNILVEALEGKLSAVYRWA-RLD 687
EL +V ++ + W +LD
Sbjct: 908 ELKSMVLKVQERSRIPEAWGQKLD 931
Score = 161 (61.7 bits), Expect = 8.6e-82, Sum P(2) = 8.6e-82
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 130 TARWRPEDSCRPD-LEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKP 186
TA P RP L++AP F PTEEEF+D YI I P+ + YGICRI+PP +W+P
Sbjct: 58 TAPREPTSRVRPHGLQEAPTFRPTEEEFRDPEAYIRKIAPEGKKYGICRIIPPENWQP 115
>UNIPROTKB|G4N2P7 [details] [associations]
symbol:MGG_04878 "Lid2 complex component lid2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00184
SMART:SM00249 SMART:SM00501 SMART:SM00558 GO:GO:0005634
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 RefSeq:XP_003712359.1 EnsemblFungi:MGG_04878T0
GeneID:2675627 KEGG:mgr:MGG_04878 Uniprot:G4N2P7
Length = 1755
Score = 701 (251.8 bits), Expect = 5.2e-81, Sum P(2) = 5.2e-81
Identities = 157/395 (39%), Positives = 207/395 (52%)
Query: 259 DERFGFEPGPAFTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
D RFGFE G ++L FQ+ A FK YF + L + V E+ ++E E
Sbjct: 511 DGRFGFEEGGLYSLKQFQERAADFKQSYFEKKMPVDPQLNCHRPVTED-------DVERE 563
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWNLNNFPRLPGS 378
+WR+V E +EV YGAD+ GSGFP D+ Y WNLN P P S
Sbjct: 564 FWRLVSSIEETVEVEYGADIHCTTHGSGFPTAEKN----PDDPYSTDPWNLNILPLHPES 619
Query: 379 VLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKL 438
+ Y DISG+ VPW+Y+GM FS+FCWH EDH+ YS NY H+GA K WYG+PG+DA K
Sbjct: 620 LFRYIKSDISGMTVPWVYVGMIFSTFCWHNEDHYSYSANYQHFGATKTWYGIPGEDAEKF 679
Query: 439 EEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGF 498
E AMR+ + +LF QPDLL +LVT L P LK G+ VY Q AG+FV+TFP+AYH+GF
Sbjct: 680 EAAMREAIPELFATQPDLLFQLVTLLPPEQLKKAGVRVYAIDQRAGQFVITFPQAYHAGF 739
Query: 499 NCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLL 558
N GFN EAVN AP DW P G +E ++ R+ SHD+LL AA +
Sbjct: 740 NHGFNFNEAVNFAPSDWEPFGLAGVERLQQFRRQPCFSHDELLWTAAEGIASGGLTIQTA 799
Query: 559 K--KNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQ-TMKMESNFDATSER 615
K + + ++ + + K K A SS + K+E E
Sbjct: 800 KWLAPALERIHSRELAQRQAFVTKH-KDLAQHSCAITGGEDSSCLLSFKVEDEDVPEEEY 858
Query: 616 ECSVCLFDLHLSAVGCHCSSDRYACLIHAKNFCSC 650
+C C +LS C S + CL+HA + C
Sbjct: 859 QCGYCKVYTYLSRFKC-LKSGQVLCLLHAGHHACC 892
Score = 157 (60.3 bits), Expect = 5.2e-81, Sum P(2) = 5.2e-81
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFV 202
+E+AP +YPT EEF++ + Y+ I P+A YGIC+IVPP +W PP + + F
Sbjct: 92 VEEAPTYYPTAEEFKEPMAYMRKIAPEARKYGICKIVPPDTWNPPFAIDTQKFH----FR 147
Query: 203 TRVQRVDKLQ 212
TR Q ++ ++
Sbjct: 148 TRKQELNSVE 157
>DICTYBASE|DDB_G0268778 [details] [associations]
symbol:rbbB "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00558 dictyBase:DDB_G0268778 GO:GO:0005634
GenomeReviews:CM000150_GR GO:GO:0003677 GO:GO:0003700
EMBL:AAFI02000004 GO:GO:0006366 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 RefSeq:XP_646956.1 ProteinModelPortal:Q55ER4
EnsemblProtists:DDB0220639 GeneID:8616646 KEGG:ddi:DDB_G0268778
InParanoid:Q55ER4 OMA:ENEFWRI Uniprot:Q55ER4
Length = 1198
Score = 619 (223.0 bits), Expect = 1.5e-79, Sum P(4) = 1.5e-79
Identities = 127/317 (40%), Positives = 188/317 (59%)
Query: 315 IEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWNLNNFPR 374
+E E+WRIVE E ++V YG+DL+ GSGF +T N + +E WNLN P+
Sbjct: 679 VENEFWRIVENGDENVQVHYGSDLDVTTHGSGFSRTTN---TQPNEH-----WNLNQMPK 730
Query: 375 LPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKD 434
+ S+ S+ + I+GV P +Y+GM FSSFCWH ED++LYS+NY+H G K WYGVPG
Sbjct: 731 MEESLFSHLTETIAGVTDPMMYVGMLFSSFCWHNEDNYLYSINYLHKGTYKTWYGVPGSC 790
Query: 435 ALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAY 494
+ + E+ M+ + +LFE+QP+LL+ L+T +SP + K +P+Y+C+Q GE+V+TFP+AY
Sbjct: 791 SDQFEKVMKNLVPELFEKQPNLLYLLITMISPDVFKRRHVPIYKCLQGPGEYVITFPQAY 850
Query: 495 HSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWE 554
H+GF+ GF AEAVN AP DW+P G +IE Y+E R + SHD+LL A + +
Sbjct: 851 HAGFSHGFTIAEAVNFAPPDWIPFGSSSIERYQETHRSSVFSHDQLLYTIANRSPSSDLS 910
Query: 555 LNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNFDATSE 614
+ L K+ ++ K+ L L KR + S T ++ +N
Sbjct: 911 VWLSKE-------FQKIKSKENSLRNQLLKRNPTLIIEK----SQKSTQEILNN----EP 955
Query: 615 RECSVCLFDLHLSAVGC 631
+C VC +D LS + C
Sbjct: 956 LQCFVCKYDCFLSFIQC 972
Score = 158 (60.7 bits), Expect = 1.5e-79, Sum P(4) = 1.5e-79
Identities = 42/114 (36%), Positives = 56/114 (49%)
Query: 102 LGQNFTARPCLPKGVIRGCPTCSDCQKVTARWRPEDSCRPDLEDAPVFYPTEEEFQDTLK 161
+ N +++ P PT Q W + +APVFYPT EEF+ L+
Sbjct: 227 IAPNNSSQSTTPTSSTSTSPTSKLKQTQYKGWAKNTISEWRIPEAPVFYPTIEEFKSPLR 286
Query: 162 YIASIRPKAEPYGICRIVPPSSWKPPCPLKE-KPIWDSSTFVTRVQRVDKLQNR 214
YI SIRP AE YGIC+IVPP +K K P F T+VQ + +L+ R
Sbjct: 287 YIESIRPIAEKYGICKIVPP--FKSDSITKNIDP--KKFKFKTKVQNIHQLKRR 336
Score = 64 (27.6 bits), Expect = 1.5e-79, Sum P(4) = 1.5e-79
Identities = 24/75 (32%), Positives = 32/75 (42%)
Query: 240 DCGSDSGNVSASGDVGCYEDERFGFEPGPAFTLNTFQKYADLFKAQYFSRDKNDAKGLGA 299
D DS + S D + FGF G ++L F+ A F ++F ND
Sbjct: 626 DLDDDSDDSDDSDD----SKQEFGFYEGNTYSLEEFEILAANFSKKWFPDGNNDP----- 676
Query: 300 NTAVLEEHWEPLVEN 314
NT V E W +VEN
Sbjct: 677 NT-VENEFWR-IVEN 689
Score = 38 (18.4 bits), Expect = 1.5e-79, Sum P(4) = 1.5e-79
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 637 RYACLIHAKNFCSC 650
+ CL H ++ C C
Sbjct: 1034 KICCLSHFEDLCDC 1047
>POMBASE|SPAC1002.05c [details] [associations]
symbol:jmj2 "histone demethylase Jmj2" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=ISM] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016577 "histone demethylation"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IMP;IDA] [GO:0034648 "histone
demethylase activity (H3-dimethyl-K4 specific)" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 PomBase:SPAC1002.05c
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0008270
GO:GO:0006338 GO:GO:0000122 GO:GO:0000790 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0051864
eggNOG:NOG327026 GO:GO:0034647 OMA:RNISGMT OrthoDB:EOG44N21B
RefSeq:NP_593492.1 ProteinModelPortal:Q9US53
EnsemblFungi:SPAC1002.05c.1 GeneID:2543275 KEGG:spo:SPAC1002.05c
NextBio:20804296 Uniprot:Q9US53
Length = 715
Score = 534 (193.0 bits), Expect = 1.6e-72, Sum P(3) = 1.6e-72
Identities = 105/234 (44%), Positives = 141/234 (60%)
Query: 315 IEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTL-NQVGSASDERYIKSGWNLNNFP 373
+E EYW++V+ +EV YGADL T GS FP N V Y K WNLN
Sbjct: 380 VEKEYWKLVKDNNTSLEVEYGADLSTLDQGSAFPSLAKNPVNP-----YSKDTWNLNVIA 434
Query: 374 RLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGK 433
GS+LSY +SG+ PWLY+GMCFS+FCWHVED++ YS+NY H+G K+WYG+PG
Sbjct: 435 STNGSLLSYIDNPVSGITCPWLYVGMCFSTFCWHVEDNYTYSVNYQHYGDTKLWYGIPGD 494
Query: 434 DALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRA 493
A + E A DL ++Q DLL++L T ++P L+ G+ VY Q EFV+TFP++
Sbjct: 495 QAERFERAALDIAPDLVKKQKDLLYQLATMINPDELQKRGVDVYFIDQGPNEFVITFPKS 554
Query: 494 YHSGFNCGFNCAEAVNVAPVDWLPHGQI--AIELYREQGRKTSISHDKLLLGAA 545
+H+G N GFN EAVN AP DWL +G + Y+ + +SHD L+ A
Sbjct: 555 FHAGINHGFNINEAVNFAPKDWLLNGFSLNGVLKYQSLLKPPVLSHDMLVYNLA 608
Score = 158 (60.7 bits), Expect = 1.6e-72, Sum P(3) = 1.6e-72
Identities = 40/98 (40%), Positives = 50/98 (51%)
Query: 113 PKGV-IRGCPTCSDCQKVTARWRPEDSCRPDLEDAPVFYPTEEEFQDTLKYIASIRPKAE 171
P G+ RG S K T + + L APVFYP +EEFQD++ YI I P E
Sbjct: 27 PHGMNTRG-NNLSSMSKNTGQRKQRSKSIHGLPVAPVFYPDKEEFQDSIGYINKIAPIGE 85
Query: 172 PYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTRVQRVD 209
YGI +IVPP+ W PP L D + F R +R D
Sbjct: 86 KYGIIKIVPPAGWNPPMQL------DMNKFSFRTRRQD 117
Score = 148 (57.2 bits), Expect = 5.1e-21, Sum P(3) = 5.1e-21
Identities = 40/102 (39%), Positives = 52/102 (50%)
Query: 262 FGFEPGPAFTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGEYWR 321
FGFE G +TL+ F+KY D FK YFS+ K+ E E +VE EYW+
Sbjct: 342 FGFETGNYYTLSNFEKYCDNFKKNYFSKFKDS------------EITEDIVEK---EYWK 386
Query: 322 IVEKATEEIEVLYGADLETCVFGSGFPKTL-NQVGSASDERY 362
+V+ +EV YGADL T GS FP N V S + +
Sbjct: 387 LVKDNNTSLEVEYGADLSTLDQGSAFPSLAKNPVNPYSKDTW 428
Score = 72 (30.4 bits), Expect = 1.6e-72, Sum P(3) = 1.6e-72
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 616 ECSVCLFDLHLSAVGCHCSSDRYACLIHAKNFCSCAWGSKFFLYRYDTSELNILV 670
+C C + S V C C S C +H + C C +K + D +EL L+
Sbjct: 660 QCQHCKAFSYFSQVACSCKSIT-VCPLHIEYLCKCDLSNKTLRLKVDDNELQKLL 713
Score = 41 (19.5 bits), Expect = 4.2e-10, Sum P(3) = 4.2e-10
Identities = 21/70 (30%), Positives = 30/70 (42%)
Query: 270 FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTA--VLEEHWEPLV-ENIEGEYW-RIVEK 325
F+LN KY L K S D L N A + P V E ++ E RI+ +
Sbjct: 581 FSLNGVLKYQSLLKPPVLSHDML-VYNLATNPASEISVSELRPWVHEAVKRELGIRIMIR 639
Query: 326 ATEEI-EVLY 334
++ E+LY
Sbjct: 640 GRYDLKEILY 649
>TAIR|locus:2031290 [details] [associations]
symbol:AT1G63490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG327026 KO:K11446
EMBL:AY039958 EMBL:BT011572 IPI:IPI00545053 RefSeq:NP_564814.1
UniGene:At.22811 ProteinModelPortal:Q94BQ7 SMR:Q94BQ7 PRIDE:Q94BQ7
EnsemblPlants:AT1G63490.1 GeneID:842655 KEGG:ath:AT1G63490
TAIR:At1g63490 HOGENOM:HOG000084215 InParanoid:Q94BQ7 OMA:WAGSEMD
PhylomeDB:Q94BQ7 ProtClustDB:CLSN2689007 ArrayExpress:Q94BQ7
Genevestigator:Q94BQ7 Uniprot:Q94BQ7
Length = 1116
Score = 733 (263.1 bits), Expect = 5.7e-72, P = 5.7e-72
Identities = 154/351 (43%), Positives = 212/351 (60%)
Query: 333 LYGADLETCVFGSGFPKTLNQVGSASD----ERYIKSGWNLNNFPRLPGSVLSYESGDIS 388
+YG DL+T V+GSGFP+ +Q + + + Y S WNLNN P+L GS+L +I+
Sbjct: 1 MYGNDLDTSVYGSGFPRIGDQRPESVEADIWDEYCGSPWNLNNMPKLKGSMLQAIRHNIN 60
Query: 389 GVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHD 448
GV VPWLY+GM FSSFCWH EDH YS+NY+HWG K WYG+PG A E+ MRK L D
Sbjct: 61 GVTVPWLYLGMLFSSFCWHFEDHCFYSVNYLHWGEAKCWYGIPGSAASAFEKVMRKTLPD 120
Query: 449 LFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAV 508
LF+ QPDLL +LVT LSP++L+ +PVY +Q G FV+TFP+++H+GFN G NCAEAV
Sbjct: 121 LFDAQPDLLFQLVTMLSPTVLQENKVPVYTVLQEPGNFVITFPKSFHAGFNFGLNCAEAV 180
Query: 509 NVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAR-EAVRAHWELNLLKKNT---SD 564
N A DWLP+G ELYR + + ISH++LL A+ ++L K+ S
Sbjct: 181 NFATADWLPYGGSGAELYRLYRKPSVISHEELLCVVAKGNCCNNEGSIHLKKELLRIYSK 240
Query: 565 NLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNFDATSERECSVCLFDL 624
W++ K GIL R+ F+ + ++ +E D T C +C L
Sbjct: 241 EKTWREQLWKSGIL-----------RSSPMFVPECADSVGIEE--DPT----CIICQQFL 283
Query: 625 HLSAVGCHCSSDRYACLIHAKNFCSCAWGSKFFL-YRYDTSELNILVEALE 674
HLSA+ C+C +ACL H K+ C C +K L YRY +EL+++V+ +E
Sbjct: 284 HLSAIVCNCRPSVFACLEHWKHLCECE-PTKLRLEYRYTLAELDMMVQEVE 333
>UNIPROTKB|E7EV89 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS51184
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0016706
EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A
IPI:IPI00909864 ProteinModelPortal:E7EV89 SMR:E7EV89 PRIDE:E7EV89
Ensembl:ENST00000544760 ArrayExpress:E7EV89 Bgee:E7EV89
Uniprot:E7EV89
Length = 715
Score = 616 (221.9 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 141/330 (42%), Positives = 190/330 (57%)
Query: 360 ERYIKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYM 419
+ Y SGWNLNN P L SVL++ + DISG+ VPWLY+GMCFSSFCWH+EDH YS+NY+
Sbjct: 55 KEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYL 114
Query: 420 HWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRC 479
HWG PK WYGVP A +LEE MR+ +LFE QPDLLH+LVT ++P++L G+PVYR
Sbjct: 115 HWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRT 174
Query: 480 VQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDK 539
Q AGEFV+TFPRAYHSGFN G+N AEAVN DWLP G+ + YR R SH++
Sbjct: 175 NQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEE 234
Query: 540 LLLGAARE--------AVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERA 591
L+ A + A EL L+ T + R ++ + G+L ++ V
Sbjct: 235 LIFKMAADPECLDVGLAAMVCKELTLM---TEEETRLRESVVQMGVLMS--EEEVFELVP 289
Query: 592 RREFLSSSSQTMKMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYACLIHA---KNFC 648
E S+ +T S + E VCL+ H + + C C + CL + ++
Sbjct: 290 DDERQCSACRTTCFLSALTCSCNPERLVCLY--HPTDL-CPCPMQK-KCLRYRYPLEDLP 345
Query: 649 SCAWGSKFFLYRYDTSELNILVEALEGKLS 678
S +G K YDT ++ + EAL +
Sbjct: 346 SLLYGVKVRAQSYDTW-VSRVTEALSANFN 374
Score = 137 (53.3 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 44/156 (28%), Positives = 67/156 (42%)
Query: 530 GRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDME 589
GR+ ++H + L R V +H EL + K +D D G ++ K L + E
Sbjct: 214 GRQC-VNHYRRL---RRHCVFSHEEL--IFKMAADP-ECLDV-GLAAMVCKELTLMTEEE 265
Query: 590 RARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNF 647
RE + M E F+ ER+CS C LSA+ C C+ +R CL H +
Sbjct: 266 TRLRESVVQMGVLMSEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 325
Query: 648 CSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRW 683
C C K YRY +L L+ ++ + + W
Sbjct: 326 CPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTW 361
Score = 110 (43.8 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSW 184
+ PVF P+ EEF D L +I IRP AE GIC+I PP +
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKEY 57
>UNIPROTKB|I3L8V3 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0016706 GeneTree:ENSGT00530000063118 EMBL:FP102715
Ensembl:ENSSSCT00000023353 Uniprot:I3L8V3
Length = 583
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 161/378 (42%), Positives = 218/378 (57%)
Query: 313 ENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFP-KTLNQVGSASDERYIKSGWNLNN 371
E +E E+WR+V E++ V YGAD+ + FGSGFP K + +E Y SGWNLNN
Sbjct: 5 ELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNN 64
Query: 372 FPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVP 431
P L SVL++ + DISG+ VPWLY+GMCFSSFCWH+EDH YS+NY+HWG PK WYGVP
Sbjct: 65 MPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVP 124
Query: 432 GKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFP 491
A +LEE MR+ +LFE QPDLLH+LVT ++P++L G+PVYR Q AGEFV+TFP
Sbjct: 125 SHAAEQLEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFP 184
Query: 492 RAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAARE---- 547
RAYHSGFN G+N AEAVN DWLP G+ + YR R SH++L+ A +
Sbjct: 185 RAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECL 244
Query: 548 ----AVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTM 603
A EL L+ T + R ++ + G+L ++ V E S+ +T
Sbjct: 245 DVGLAAMVCKELTLM---TEEETRLRESVVQMGVLMS--EEEVFELVPDDERQCSACRTT 299
Query: 604 KMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYACLIHA---KNFCSCAWGSKFFLYR 660
S + E VCL+ H + + C C + CL + ++ S +G K
Sbjct: 300 CFLSALTCSCNPERLVCLY--HPTDL-CPCPMQK-KCLRYRYPLEDLPSLLYGVKVRAQS 355
Query: 661 YDTSELNILVEALEGKLS 678
YDT ++ + EAL +
Sbjct: 356 YDTW-VSRVTEALSASFN 372
Score = 139 (54.0 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 47/167 (28%), Positives = 73/167 (43%)
Query: 530 GRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDME 589
GR+ ++H + L R V +H EL + K +D D G ++ K L + E
Sbjct: 212 GRQC-VNHYRRL---RRHCVFSHEEL--IFKMAADP-ECLDV-GLAAMVCKELTLMTEEE 263
Query: 590 RARREFLSSSSQTMKMESNFDAT--SERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNF 647
RE + M E F+ ER+CS C LSA+ C C+ +R CL H +
Sbjct: 264 TRLRESVVQMGVLMSEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 323
Query: 648 CSCAWGSKFFLYRYDTSELNILVEALEGKLSAVYRW-ARLDLGLALS 693
C C K YRY +L L+ ++ + + W +R+ L+ S
Sbjct: 324 CPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSAS 370
>CGD|CAL0000662 [details] [associations]
symbol:orf19.5651 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0000662
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACQ01000129 EMBL:AACQ01000128 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 RefSeq:XP_713332.1
RefSeq:XP_713379.1 ProteinModelPortal:Q59UR9 STRING:Q59UR9
GeneID:3644970 GeneID:3645037 KEGG:cal:CaO19.13096
KEGG:cal:CaO19.5651 Uniprot:Q59UR9
Length = 723
Score = 554 (200.1 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 113/259 (43%), Positives = 157/259 (60%)
Query: 310 PL-VENIEGEYWRIVEKATEEIEVLYGADLETCVFG--SGFPKTLNQVGSASD---ERYI 363
PL V++IE ++W V+ ++EV YGAD+ G SGFP +D + YI
Sbjct: 266 PLSVDDIERKFWSFVDAEKSDLEVKYGADIHNLRPGEVSGFPMADTPSLDTTDPAIQYYI 325
Query: 364 KSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGA 423
WNLN P GS+L++ + ISG+ +PW+YIG S+FCWHVEDH+ S NY H+GA
Sbjct: 326 NHPWNLNKLPFSNGSLLNFINTSISGMTIPWIYIGSLLSTFCWHVEDHYTLSANYCHFGA 385
Query: 424 PKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNA 483
K WYG+P A K E+ MR DLF+ QPDLLH+LVT +SPS L G+P QN+
Sbjct: 386 TKKWYGIPSSFADKFEKLMRDSAPDLFKRQPDLLHQLVTLMSPSKLVEHGIPCVYADQNS 445
Query: 484 GEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLG 543
EFV+T+P YH+GFNCGFN EAVN A +WL G+ ++ YR ++ +H +LL
Sbjct: 446 NEFVITYPLVYHAGFNCGFNFNEAVNFAIDEWLEFGEKSVNDYRPIKKENVFNHYELLEN 505
Query: 544 A-AREAVRAHWELNLLKKN 561
+R + L+L+K++
Sbjct: 506 ILSRFNAKHDVSLDLVKRS 524
Score = 103 (41.3 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIAS--IRPKAEPYGICRIVPPSSWKP 186
L PV PT++EF D + Y++S + YG+ +IVPP +WKP
Sbjct: 8 LTPCPVLTPTDQEFNDPVGYLSSDKVSKLGATYGLVKIVPPPNWKP 53
>WB|WBGene00004319 [details] [associations]
symbol:rbr-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone
H3-K4 demethylation" evidence=IMP;IDA] [GO:0040028 "regulation of
vulval development" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0008340 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:Z69385 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 HSSP:Q14839
PIR:T27924 RefSeq:NP_502032.2 ProteinModelPortal:Q23541 SMR:Q23541
STRING:Q23541 PaxDb:Q23541 EnsemblMetazoa:ZK593.4 GeneID:177985
KEGG:cel:CELE_ZK593.4 UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4
HOGENOM:HOG000113216 InParanoid:Q23541 OMA:KANQLLF NextBio:899238
Uniprot:Q23541
Length = 1477
Score = 644 (231.8 bits), Expect = 7.6e-62, P = 7.6e-62
Identities = 159/437 (36%), Positives = 228/437 (52%)
Query: 258 EDERFGFEPG-----PAFTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLV 312
ED + G + G + LN+F ++A+ +K YF D + +
Sbjct: 372 EDAKIGLDWGFYDADTEYNLNSFTEFANKWKCDYFG--VKDVSQVSCDA----------- 418
Query: 313 ENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQ-VGS--ASDERYIKSGWNL 369
+E +W+ V + V YGADL T GSGFP+ ++ G ++Y WNL
Sbjct: 419 --VERSFWKNVISHENPVSVKYGADLITSRVGSGFPRKEDKHTGPDLKLKQQYASHAWNL 476
Query: 370 NNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYG 429
NN P L SVLS+ + ISG++VPW+Y+GMCFS+FCWH EDH YS+NY H+G K+WYG
Sbjct: 477 NNMPVLRESVLSHFNTGISGMMVPWVYVGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYG 536
Query: 430 VPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLT 489
V G+DA K E+A++K L Q DL H + T +P +L+S G+P++ QNAGEFV+T
Sbjct: 537 VGGEDAEKFEDALKKIAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNAGEFVIT 596
Query: 490 FPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAV 549
FPRAYH+GFN G N AEAVN AP+DWL G+ +E Y R SHD+LL + V
Sbjct: 597 FPRAYHAGFNEGLNFAEAVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLF----KMV 652
Query: 550 RAHWELNL-LKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESN 608
A +L + + T + L K +L + L AR + Q + E
Sbjct: 653 EAMDKLGISMSLATHEELI--RIYEKQKMLRELL--------ARLGVSNRQMQQVMFEKI 702
Query: 609 FDATSERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNFC-SCAWGSKFFLYRYDTSELN 667
D +R C C L + A+ C+ + C+ H + C SC + YR++ +LN
Sbjct: 703 PD--EQRSCRFCKTTLFMCALVCN-KHKKMTCVEHHDHLCNSCTTKDYRYQYRFELDQLN 759
Query: 668 ILVEALEGKLSAVYR-W 683
+ + L GK + Y W
Sbjct: 760 NMCDEL-GKRTVNYNGW 775
Score = 170 (64.9 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 52/200 (26%), Positives = 103/200 (51%)
Query: 140 RPDLEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSS 199
RP + AP++YPTEEEF D ++Y+A IR +AE +G+ +IVPP+++KPP + + ++
Sbjct: 52 RPPM--APIYYPTEEEFSDPIEYVAKIRHEAEKFGVVKIVPPANFKPPFAIDK----EAF 105
Query: 200 TFVTRVQRVDKLQNRNSMRKVXXXXXXXXXXXXXXXXMAVDCGSD-SGNVSASGDVGCYE 258
TF R Q++++++ ++ K + + D GN+ V Y
Sbjct: 106 TFRPRTQKLNEVE---AIVKEKHTFIDRLINFNRYSGLTFEFPVDRDGNI-----VDLYR 157
Query: 259 DERFGFEPGPAFTLNTFQKYADLFKAQYFSRDKNDAKGL-GANTAVLEEHW----EPLVE 313
R G +N +K+ D+ + +Y +++ A+G+ A ++ H+ EP
Sbjct: 158 LHRIVQNFGGCEEVNEDEKWRDVAR-EYLPKEQM-ARGVPSAFINLIRSHYNLHIEPFNR 215
Query: 314 NIEGEYWRIVEKATEEIEVL 333
N++ + + +++ +E+E L
Sbjct: 216 NLKEKAMKNDDESDDEMEEL 235
Score = 39 (18.8 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 584 KRVDMERARREFLSSSSQTMKMESNFDATSEREC 617
K + +R+ +S S+ + ES F + R C
Sbjct: 1386 KETSKKSRKRQSQASPSEYYEDESEFKSCQARAC 1419
Score = 37 (18.1 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 432 GKDAL-KLEEAMRKHLHDLFEEQPDLLHKLVT 462
GK L ++EE + + + Q D +HKL+T
Sbjct: 787 GKPKLERIEEFIDSAKQNKYP-QTDQVHKLIT 817
>UNIPROTKB|Q23541 [details] [associations]
symbol:rbr-2 "Lysine-specific demethylase rbr-2"
species:6239 "Caenorhabditis elegans" [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IDA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0008340
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:Z69385
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0034647
KO:K11446 HSSP:Q14839 PIR:T27924 RefSeq:NP_502032.2
ProteinModelPortal:Q23541 SMR:Q23541 STRING:Q23541 PaxDb:Q23541
EnsemblMetazoa:ZK593.4 GeneID:177985 KEGG:cel:CELE_ZK593.4
UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4 HOGENOM:HOG000113216
InParanoid:Q23541 OMA:KANQLLF NextBio:899238 Uniprot:Q23541
Length = 1477
Score = 644 (231.8 bits), Expect = 7.6e-62, P = 7.6e-62
Identities = 159/437 (36%), Positives = 228/437 (52%)
Query: 258 EDERFGFEPG-----PAFTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLV 312
ED + G + G + LN+F ++A+ +K YF D + +
Sbjct: 372 EDAKIGLDWGFYDADTEYNLNSFTEFANKWKCDYFG--VKDVSQVSCDA----------- 418
Query: 313 ENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQ-VGS--ASDERYIKSGWNL 369
+E +W+ V + V YGADL T GSGFP+ ++ G ++Y WNL
Sbjct: 419 --VERSFWKNVISHENPVSVKYGADLITSRVGSGFPRKEDKHTGPDLKLKQQYASHAWNL 476
Query: 370 NNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYG 429
NN P L SVLS+ + ISG++VPW+Y+GMCFS+FCWH EDH YS+NY H+G K+WYG
Sbjct: 477 NNMPVLRESVLSHFNTGISGMMVPWVYVGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYG 536
Query: 430 VPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLT 489
V G+DA K E+A++K L Q DL H + T +P +L+S G+P++ QNAGEFV+T
Sbjct: 537 VGGEDAEKFEDALKKIAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNAGEFVIT 596
Query: 490 FPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAV 549
FPRAYH+GFN G N AEAVN AP+DWL G+ +E Y R SHD+LL + V
Sbjct: 597 FPRAYHAGFNEGLNFAEAVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLF----KMV 652
Query: 550 RAHWELNL-LKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESN 608
A +L + + T + L K +L + L AR + Q + E
Sbjct: 653 EAMDKLGISMSLATHEELI--RIYEKQKMLRELL--------ARLGVSNRQMQQVMFEKI 702
Query: 609 FDATSERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNFC-SCAWGSKFFLYRYDTSELN 667
D +R C C L + A+ C+ + C+ H + C SC + YR++ +LN
Sbjct: 703 PD--EQRSCRFCKTTLFMCALVCN-KHKKMTCVEHHDHLCNSCTTKDYRYQYRFELDQLN 759
Query: 668 ILVEALEGKLSAVYR-W 683
+ + L GK + Y W
Sbjct: 760 NMCDEL-GKRTVNYNGW 775
Score = 170 (64.9 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 52/200 (26%), Positives = 103/200 (51%)
Query: 140 RPDLEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSS 199
RP + AP++YPTEEEF D ++Y+A IR +AE +G+ +IVPP+++KPP + + ++
Sbjct: 52 RPPM--APIYYPTEEEFSDPIEYVAKIRHEAEKFGVVKIVPPANFKPPFAIDK----EAF 105
Query: 200 TFVTRVQRVDKLQNRNSMRKVXXXXXXXXXXXXXXXXMAVDCGSD-SGNVSASGDVGCYE 258
TF R Q++++++ ++ K + + D GN+ V Y
Sbjct: 106 TFRPRTQKLNEVE---AIVKEKHTFIDRLINFNRYSGLTFEFPVDRDGNI-----VDLYR 157
Query: 259 DERFGFEPGPAFTLNTFQKYADLFKAQYFSRDKNDAKGL-GANTAVLEEHW----EPLVE 313
R G +N +K+ D+ + +Y +++ A+G+ A ++ H+ EP
Sbjct: 158 LHRIVQNFGGCEEVNEDEKWRDVAR-EYLPKEQM-ARGVPSAFINLIRSHYNLHIEPFNR 215
Query: 314 NIEGEYWRIVEKATEEIEVL 333
N++ + + +++ +E+E L
Sbjct: 216 NLKEKAMKNDDESDDEMEEL 235
Score = 39 (18.8 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 584 KRVDMERARREFLSSSSQTMKMESNFDATSEREC 617
K + +R+ +S S+ + ES F + R C
Sbjct: 1386 KETSKKSRKRQSQASPSEYYEDESEFKSCQARAC 1419
Score = 37 (18.1 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 432 GKDAL-KLEEAMRKHLHDLFEEQPDLLHKLVT 462
GK L ++EE + + + Q D +HKL+T
Sbjct: 787 GKPKLERIEEFIDSAKQNKYP-QTDQVHKLIT 817
>ZFIN|ZDB-GENE-060503-246 [details] [associations]
symbol:jarid2b "jumonji, AT rich interactive domain
2b" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0035097 "histone methyltransferase
complex" evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0048863 "stem cell differentiation"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00558 ZFIN:ZDB-GENE-060503-246
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:BX842609 EMBL:BX890540 IPI:IPI00500491 RefSeq:NP_001189388.1
UniGene:Dr.108454 Ensembl:ENSDART00000147627 GeneID:558456
KEGG:dre:558456 CTD:558456 GeneTree:ENSGT00530000063118
InParanoid:Q1LVC2 OMA:CDESEIS NextBio:20882479 Bgee:Q1LVC2
Uniprot:Q1LVC2
Length = 1319
Score = 434 (157.8 bits), Expect = 5.1e-51, Sum P(3) = 5.1e-51
Identities = 122/389 (31%), Positives = 197/389 (50%)
Query: 297 LGANTAVLEEHWEPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGS 356
+ NT ++ + EP +E +YWRIVE+ + V YG ++T GSGFP VG
Sbjct: 898 IARNTMMMYFNKEPGAAEVEQDYWRIVEQRDCHVAVHYGK-VDTNTHGSGFP-----VGK 951
Query: 357 ASDERYIKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSL 416
+ E + K GWNL P GS+L + G + GV +PWL IGM FS+ CW + + L +
Sbjct: 952 S--EPFSKHGWNLTVLPNNSGSILRH-LGAVPGVTIPWLNIGMVFSTSCWSQDQNRLPYI 1008
Query: 417 NYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPV 476
+Y+H GA +WY +P ++ KL++ + L ++L K V +SP +L EG+ V
Sbjct: 1009 DYLHTGADCIWYSIPAEEKTKLDKVVHTLLQANGTPGLEMLEKNV-MISPEVLCREGIKV 1067
Query: 477 YRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSIS 536
+R VQ +G+FV+ FP A+ S CG++ +E V+ A W+ G A + + + S
Sbjct: 1068 HRTVQQSGQFVVVFPGAFVSRVCCGYSVSETVHFATPQWMNLGYEAAKDLKCRRIAKPFS 1127
Query: 537 HDKLLLG-AAREAVRAHWEL-----NLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMER 590
+KLL A EA R + + +LLK + ++ + + G+L+ A D +
Sbjct: 1128 MEKLLYQIATAEAKRENRLVLSTISSLLKDLRNIEMKQRQELYEAGLLSSARYCTHDHNQ 1187
Query: 591 ARREFLSSSSQTMKMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYA--CLIH-AKNF 647
+ + + + +ES SER C +C +LS V + + C +H +
Sbjct: 1188 SPADTRKKPRKWLALES-----SERRCQMCQHLCYLSMVVQENENVVFCLECALHYVEKH 1242
Query: 648 CSCAWGSKFFLYRYDTSELNILVEALEGK 676
+C G K +YRYD ++N LV + GK
Sbjct: 1243 KNCR-GLKM-MYRYDEEQINSLVNQVCGK 1269
Score = 174 (66.3 bits), Expect = 5.1e-51, Sum P(3) = 5.1e-51
Identities = 33/72 (45%), Positives = 44/72 (61%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFV 202
L D P+F P+ EFQD L Y+ S R + E G+CR++PP+ W+P C L D FV
Sbjct: 604 LGDVPIFKPSSREFQDPLVYLDSFREQVESCGLCRVLPPTDWRPECKLN-----DEMRFV 658
Query: 203 TRVQRVDKLQNR 214
T+VQR+ KL R
Sbjct: 659 TQVQRIHKLGRR 670
Score = 42 (19.8 bits), Expect = 5.1e-51, Sum P(3) = 5.1e-51
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 253 DVGCYEDERFGFEPGPAFTLNTFQKYADLFKAQYFSRDKNDAK 295
D G D+ G + +L TF + A YF+++ A+
Sbjct: 873 DEGVLSDQHKCIYKGRSVSLTTFYRIARNTMMMYFNKEPGAAE 915
>UNIPROTKB|F1MH56 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:DAAA02055659 EMBL:DAAA02055660 EMBL:DAAA02055661
EMBL:DAAA02055662 IPI:IPI00689067 ProteinModelPortal:F1MH56
Ensembl:ENSBTAT00000017189 NextBio:20874777 Uniprot:F1MH56
Length = 1248
Score = 415 (151.1 bits), Expect = 4.0e-49, Sum P(2) = 4.0e-49
Identities = 125/380 (32%), Positives = 190/380 (50%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWN 368
EP IE EYWR+VE+ + V G ++T GSGFP VG + E + + GWN
Sbjct: 852 EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFP-----VGKS--EPFSRHGWN 903
Query: 369 LNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWY 428
L P GS+L + G + GV +PWL IGM FS+ CW + +HL ++Y+H GA +WY
Sbjct: 904 LTVLPNNTGSILRH-LGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 962
Query: 429 GVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVL 488
+P ++ KLE+ + L +L V +SP +L EG+ V+R VQ +G+FV+
Sbjct: 963 CIPAEEEHKLEDVVHTLLQANGTPGLQMLESNV-MISPEVLCREGIKVHRTVQQSGQFVV 1021
Query: 489 TFPRAYHSGFNCGFNCAEAVNVAPVDWLPHG-QIAIELYREQGRKTSISHDKLLLGAAR- 546
FP ++ S CG++ +E V+ A W G + A E+ R K S +KLL A+
Sbjct: 1022 CFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKP-FSMEKLLYQIAQA 1080
Query: 547 EAVRAHWE-LN----LLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQ 601
EA + + L+ LL + LR + + G+ + A D A + +
Sbjct: 1081 EAKKENGPTLSTISALLDELRDTELRQRRQLFEAGLHSSARYGSHDGSSAAPDGKKKPRK 1140
Query: 602 TMKMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYA--CLI-HAKNFCSCAWGSKFFL 658
+++E TSER C VC +LS V + + C + H + SC G K +
Sbjct: 1141 WLQLE-----TSERRCQVCQHLCYLSMVVQENENVVFCLECALRHVEKQKSCR-GLKL-M 1193
Query: 659 YRYDTSELNILVEALEGKLS 678
YRYD ++ LV + GK+S
Sbjct: 1194 YRYDEEQIISLVNQICGKVS 1213
Score = 177 (67.4 bits), Expect = 4.0e-49, Sum P(2) = 4.0e-49
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFV 202
+++ PV P+ +EF D L YI S+RP+ E YG+CR++PP W+P C L D FV
Sbjct: 566 MDEIPVLRPSAKEFHDPLVYIESVRPQVEKYGMCRVIPPPDWRPECKLN-----DEMRFV 620
Query: 203 TRVQRVDKLQNR 214
T++Q + KL R
Sbjct: 621 TQIQHIHKLGRR 632
>UNIPROTKB|F1RUJ7 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:CT841540 EMBL:CT737348 Ensembl:ENSSSCT00000001155
Uniprot:F1RUJ7
Length = 1232
Score = 413 (150.4 bits), Expect = 6.7e-49, Sum P(2) = 6.7e-49
Identities = 125/380 (32%), Positives = 190/380 (50%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWN 368
EP IE EYWR+VE+ + V G ++T GSGFP VG + E + + GWN
Sbjct: 834 EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFP-----VGKS--EPFSRHGWN 885
Query: 369 LNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWY 428
L P GS+L + G + GV +PWL IGM FS+ CW + +HL ++Y+H GA +WY
Sbjct: 886 LTVLPNNTGSILRH-LGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 944
Query: 429 GVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVL 488
+P ++ KLE+ + L +L V +SP +L EG+ V+R VQ +G+FV+
Sbjct: 945 CIPAEEENKLEDVVHTLLQANGTPGLQMLESNV-MISPEVLCREGVKVHRAVQQSGQFVV 1003
Query: 489 TFPRAYHSGFNCGFNCAEAVNVAPVDWLPHG-QIAIELYREQGRKTSISHDKLLLGAAR- 546
FP ++ S CG++ +E V+ A W G + A E+ R K S +KLL A+
Sbjct: 1004 CFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKP-FSMEKLLYQIAQA 1062
Query: 547 EAVRAHWE-LN----LLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQ 601
EA + + L+ LL + LR + + G+ + A D A + +
Sbjct: 1063 EAKKENGPTLSTISALLDELRDTELRQRRQLFEAGLHSSARYGSHDGGSAAPDGKKKPRK 1122
Query: 602 TMKMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYA--CLI-HAKNFCSCAWGSKFFL 658
+++E TSER C VC +LS V + + C + H + SC G K +
Sbjct: 1123 WLQLE-----TSERRCQVCQHLCYLSMVVQENENVVFCLECALRHVEKQKSCR-GLKL-M 1175
Query: 659 YRYDTSELNILVEALEGKLS 678
YRYD ++ LV + GK+S
Sbjct: 1176 YRYDEEQIISLVNQICGKVS 1195
Score = 177 (67.4 bits), Expect = 6.7e-49, Sum P(2) = 6.7e-49
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFV 202
+++ PV P+ +EF D L YI S+RP+ E YG+CR++PP W+P C L D FV
Sbjct: 548 MDEIPVLRPSAKEFHDPLVYIESVRPQVEKYGMCRVIPPPDWRPECKLN-----DEMRFV 602
Query: 203 TRVQRVDKLQNR 214
T++Q + KL R
Sbjct: 603 TQIQHIHKLGRR 614
>UNIPROTKB|F1P6D5 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
EMBL:AAEX03017561 EMBL:AAEX03017558 EMBL:AAEX03017559
EMBL:AAEX03017560 Ensembl:ENSCAFT00000015718 Uniprot:F1P6D5
Length = 1249
Score = 418 (152.2 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 125/380 (32%), Positives = 190/380 (50%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWN 368
EP IE EYWR+VE+ + V G ++T GSGFP VG + E + + GWN
Sbjct: 843 EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFP-----VGKS--EPFSRHGWN 894
Query: 369 LNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWY 428
L P GS+L + G + GV +PWL IGM FS+ CW + +HL ++Y+H GA +WY
Sbjct: 895 LTVLPNNTGSILRH-LGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 953
Query: 429 GVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVL 488
+P ++ KLE+ + L +L V +SP +L EG+ V+R VQ +G+FV+
Sbjct: 954 CIPAEEENKLEDVVHTLLQANGTPGLQMLESNV-MISPEVLCKEGIKVHRTVQQSGQFVV 1012
Query: 489 TFPRAYHSGFNCGFNCAEAVNVAPVDWLPHG-QIAIELYREQGRKTSISHDKLLLGAAR- 546
FP ++ S CG++ +E V+ A W G + A E+ R K S +KLL A+
Sbjct: 1013 CFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKP-FSMEKLLYQIAQA 1071
Query: 547 EAVRAHWE-LN----LLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQ 601
EA + + L+ LL + LR + + G+ + A D A + +
Sbjct: 1072 EAKKENGPTLSTISALLDELRDTELRQRRQLFEAGLHSSARYGSHDSNGAMADGKKKPRK 1131
Query: 602 TMKMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYA--CLI-HAKNFCSCAWGSKFFL 658
+++E TSER C VC +LS V + + C + H + SC G K +
Sbjct: 1132 WLQLE-----TSERRCQVCQHLCYLSMVVQENENVVFCLECALRHVEKQKSCR-GLKL-M 1184
Query: 659 YRYDTSELNILVEALEGKLS 678
YRYD ++ LV + GK+S
Sbjct: 1185 YRYDEEQIISLVNQICGKVS 1204
Score = 169 (64.5 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFV 202
+++ PV P+ +EF D L YI S+R + E YG+CR++PP W+P C L D FV
Sbjct: 557 MDEIPVLRPSAKEFHDPLVYIESVRAQVEKYGMCRVIPPPDWRPECKLN-----DEMRFV 611
Query: 203 TRVQRVDKLQNR 214
T++Q + KL R
Sbjct: 612 TQIQHIHKLGRR 623
>UNIPROTKB|J9NWC2 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AAEX03017561
EMBL:AAEX03017558 EMBL:AAEX03017559 EMBL:AAEX03017560
Ensembl:ENSCAFT00000043518 Uniprot:J9NWC2
Length = 1259
Score = 418 (152.2 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 125/380 (32%), Positives = 190/380 (50%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWN 368
EP IE EYWR+VE+ + V G ++T GSGFP VG + E + + GWN
Sbjct: 853 EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFP-----VGKS--EPFSRHGWN 904
Query: 369 LNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWY 428
L P GS+L + G + GV +PWL IGM FS+ CW + +HL ++Y+H GA +WY
Sbjct: 905 LTVLPNNTGSILRH-LGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 963
Query: 429 GVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVL 488
+P ++ KLE+ + L +L V +SP +L EG+ V+R VQ +G+FV+
Sbjct: 964 CIPAEEENKLEDVVHTLLQANGTPGLQMLESNV-MISPEVLCKEGIKVHRTVQQSGQFVV 1022
Query: 489 TFPRAYHSGFNCGFNCAEAVNVAPVDWLPHG-QIAIELYREQGRKTSISHDKLLLGAAR- 546
FP ++ S CG++ +E V+ A W G + A E+ R K S +KLL A+
Sbjct: 1023 CFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKP-FSMEKLLYQIAQA 1081
Query: 547 EAVRAHWE-LN----LLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQ 601
EA + + L+ LL + LR + + G+ + A D A + +
Sbjct: 1082 EAKKENGPTLSTISALLDELRDTELRQRRQLFEAGLHSSARYGSHDSNGAMADGKKKPRK 1141
Query: 602 TMKMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYA--CLI-HAKNFCSCAWGSKFFL 658
+++E TSER C VC +LS V + + C + H + SC G K +
Sbjct: 1142 WLQLE-----TSERRCQVCQHLCYLSMVVQENENVVFCLECALRHVEKQKSCR-GLKL-M 1194
Query: 659 YRYDTSELNILVEALEGKLS 678
YRYD ++ LV + GK+S
Sbjct: 1195 YRYDEEQIISLVNQICGKVS 1214
Score = 169 (64.5 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFV 202
+++ PV P+ +EF D L YI S+R + E YG+CR++PP W+P C L D FV
Sbjct: 567 MDEIPVLRPSAKEFHDPLVYIESVRAQVEKYGMCRVIPPPDWRPECKLN-----DEMRFV 621
Query: 203 TRVQRVDKLQNR 214
T++Q + KL R
Sbjct: 622 TQIQHIHKLGRR 633
>UNIPROTKB|F1NWZ0 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0031061
"negative regulation of histone methylation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 IPI:IPI00597467 GO:GO:0031061
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AADN02027529
EMBL:AADN02027521 EMBL:AADN02027522 EMBL:AADN02027523
EMBL:AADN02027524 EMBL:AADN02027525 EMBL:AADN02027526
EMBL:AADN02027527 EMBL:AADN02027528 Ensembl:ENSGALT00000020740
Uniprot:F1NWZ0
Length = 1220
Score = 420 (152.9 bits), Expect = 1.7e-48, Sum P(2) = 1.7e-48
Identities = 122/380 (32%), Positives = 189/380 (49%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWN 368
EP V +E EYWR+VE+ + V G ++T GSGFP VG + E + + GWN
Sbjct: 816 EPTVAEVEQEYWRLVEQKDSHVAVHCGK-VDTNTHGSGFP-----VGKS--EPFSRHGWN 867
Query: 369 LNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWY 428
L P GS+L + G + GV +PWL IGM FS+ CW + +HL ++Y+H GA +WY
Sbjct: 868 LTVLPNNTGSILRH-LGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 926
Query: 429 GVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVL 488
+P + KL++ + L ++L V +SP IL EG+ V+R VQ +G+FV+
Sbjct: 927 CIPAAEENKLDDVVHTLLQANGTPGLEMLESNV-MISPEILCKEGIRVHRTVQQSGQFVV 985
Query: 489 TFPRAYHSGFNCGFNCAEAVNVAPVDWLPHG-QIAIELYREQGRKTSISHDKLLLG-AAR 546
FP ++ S CG++ +E V+ A W G + A E+ R + K S +KLL A
Sbjct: 986 CFPGSFVSKVCCGYSVSETVHFATTQWTSMGFKTAKEMKRRRIAKP-FSMEKLLYQIATA 1044
Query: 547 EAVRAHWEL-----NLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQ 601
EA + + +LL + LR + + G+ + A D + +
Sbjct: 1045 EAKKENGPTLSTISSLLGELRDTELRQRRQLYEAGLHSSARYGSHDSSSTAMDGKKKPRK 1104
Query: 602 TMKMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYA--CLI-HAKNFCSCAWGSKFFL 658
+++E TSER C +C +LS V + + C + H + SC G K +
Sbjct: 1105 WLQLE-----TSERRCQICQHLCYLSMVVQENENVVFCLECALRHVEKQKSCR-GLKM-M 1157
Query: 659 YRYDTSELNILVEALEGKLS 678
YRYD ++ LV + GK+S
Sbjct: 1158 YRYDEEQIISLVNQICGKVS 1177
Score = 165 (63.1 bits), Expect = 1.7e-48, Sum P(2) = 1.7e-48
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFV 202
L + P+ P+ +EF D L YI S+R + E YG+CR++PP W+P C L D FV
Sbjct: 530 LGEIPILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLN-----DEMRFV 584
Query: 203 TRVQRVDKLQNR 214
T++Q + KL R
Sbjct: 585 TQIQHIHKLGRR 596
Score = 41 (19.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 574 KDGILAKALKKRVDMERARREFLSSSSQTMKMESNFDATSERECSVCLFDLH 625
K+G K + V ++ RR + +T K D E E V L DLH
Sbjct: 742 KNGFRNKLKEVDVPLKTGRRRLFAQEKETTK-----DDEEEEEEGV-LSDLH 787
>UNIPROTKB|Q5F363 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0051574 "positive regulation of histone
H3-K9 methylation" evidence=ISS] [GO:0031061 "negative regulation
of histone methylation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AJ851787
IPI:IPI00597467 RefSeq:NP_001012880.1 UniGene:Gga.12117
ProteinModelPortal:Q5F363 STRING:Q5F363 GeneID:420839
KEGG:gga:420839 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 InParanoid:Q5F363 KO:K11478 OrthoDB:EOG4KKZ26
NextBio:20823696 GO:GO:0031061 Uniprot:Q5F363
Length = 1233
Score = 420 (152.9 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 122/380 (32%), Positives = 189/380 (49%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWN 368
EP V +E EYWR+VE+ + V G ++T GSGFP VG + E + + GWN
Sbjct: 829 EPTVAEVEQEYWRLVEQKDSHVAVHCGK-VDTNTHGSGFP-----VGKS--EPFSRHGWN 880
Query: 369 LNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWY 428
L P GS+L + G + GV +PWL IGM FS+ CW + +HL ++Y+H GA +WY
Sbjct: 881 LTVLPNNTGSILRH-LGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 939
Query: 429 GVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVL 488
+P + KL++ + L ++L V +SP IL EG+ V+R VQ +G+FV+
Sbjct: 940 CIPAAEENKLDDVVHTLLQANGTPGLEMLESNV-MISPEILCKEGIRVHRTVQQSGQFVV 998
Query: 489 TFPRAYHSGFNCGFNCAEAVNVAPVDWLPHG-QIAIELYREQGRKTSISHDKLLLG-AAR 546
FP ++ S CG++ +E V+ A W G + A E+ R + K S +KLL A
Sbjct: 999 CFPGSFVSKVCCGYSVSETVHFATTQWTSMGFKTAKEMKRRRIAKP-FSMEKLLYQIATA 1057
Query: 547 EAVRAHWEL-----NLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQ 601
EA + + +LL + LR + + G+ + A D + +
Sbjct: 1058 EAKKENGPTLSTISSLLGELRDTELRQRRQLYEAGLHSSARYGSHDSSSTAMDGKKKPRK 1117
Query: 602 TMKMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYA--CLI-HAKNFCSCAWGSKFFL 658
+++E TSER C +C +LS V + + C + H + SC G K +
Sbjct: 1118 WLQLE-----TSERRCQICQHLCYLSMVVQENENVVFCLECALRHVEKQKSCR-GLKM-M 1170
Query: 659 YRYDTSELNILVEALEGKLS 678
YRYD ++ LV + GK+S
Sbjct: 1171 YRYDEEQIISLVNQICGKVS 1190
Score = 165 (63.1 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFV 202
L + P+ P+ +EF D L YI S+R + E YG+CR++PP W+P C L D FV
Sbjct: 543 LGEIPILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLN-----DEMRFV 597
Query: 203 TRVQRVDKLQNR 214
T++Q + KL R
Sbjct: 598 TQIQHIHKLGRR 609
Score = 41 (19.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 574 KDGILAKALKKRVDMERARREFLSSSSQTMKMESNFDATSERECSVCLFDLH 625
K+G K + V ++ RR + +T K D E E V L DLH
Sbjct: 755 KNGFRNKLKEVDVPLKTGRRRLFAQEKETTK-----DDEEEEEEGV-LSDLH 800
>SGD|S000003880 [details] [associations]
symbol:JHD2 "JmjC domain family histone demethylase specific
for H3-K4" species:4932 "Saccharomyces cerevisiae" [GO:0032453
"histone demethylase activity (H3-K4 specific)" evidence=IDA;IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016577 "histone demethylation" evidence=IDA;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 SGD:S000003880
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0046872
GO:GO:0008270 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
EMBL:Z49619 EMBL:Z49620 PIR:S57142 RefSeq:NP_012653.1
ProteinModelPortal:P47156 SMR:P47156 DIP:DIP-4835N IntAct:P47156
MINT:MINT-537060 STRING:P47156 PaxDb:P47156 EnsemblFungi:YJR119C
GeneID:853583 KEGG:sce:YJR119C CYGD:YJR119c HOGENOM:HOG000113131
OMA:RNISGMT OrthoDB:EOG44N21B NextBio:974376 Genevestigator:P47156
GermOnline:YJR119C GO:GO:0032453 Uniprot:P47156
Length = 728
Score = 445 (161.7 bits), Expect = 2.7e-48, Sum P(2) = 2.7e-48
Identities = 92/228 (40%), Positives = 127/228 (55%)
Query: 312 VENIEGEYWRIVEKATEE--IEVLYGADLETCVFG--SGFP------KTLNQVGSASDER 361
++ +E +W +V K V YGAD+ + G +GFP K +N +
Sbjct: 322 IDELEEMFWSLVTKNRRSSLTTVKYGADIHNELPGQITGFPTREFIPKNINGDELIDYLK 381
Query: 362 YIKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHW 421
Y NL N P S+L +ISG+ +PW+YIG FS+FCWH+ED + S NY H
Sbjct: 382 YCDHPMNLTNLPMAHNSLLPLFKRNISGMTIPWIYIGSLFSTFCWHMEDQYTLSANYQHE 441
Query: 422 GAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSP--SILKSEGLPVYRC 479
G PK+WY +P K + + DLF +QPDLLH+LVT +SP K G+PVY+
Sbjct: 442 GDPKVWYSIPESGCTKFNDLLNDMSPDLFIKQPDLLHQLVTLISPYDPNFKKSGIPVYKA 501
Query: 480 VQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYR 527
VQ E+++TFP+ YH+GFN G+N EAVN WLP+G AI Y+
Sbjct: 502 VQKPNEYIITFPKCYHAGFNTGYNFNEAVNFTIDFWLPYGFGAITDYK 549
Score = 121 (47.7 bits), Expect = 2.7e-48, Sum P(2) = 2.7e-48
Identities = 24/78 (30%), Positives = 46/78 (58%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIAS--IRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSST 200
+E+ P YPTE+EF++ + Y+++ I+ YG+ ++VPP+ + PP + ++ T
Sbjct: 1 MEEIPALYPTEQEFKNPIDYLSNPHIKRLGVRYGMVKVVPPNGFCPPLSID----MENFT 56
Query: 201 FVTRVQRVDKLQNRNSMR 218
F R+Q ++ L +N R
Sbjct: 57 FQPRIQNLENLDLKNRCR 74
>MGI|MGI:104813 [details] [associations]
symbol:Jarid2 "jumonji, AT rich interactive domain 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0001889 "liver development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA;TAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031061 "negative regulation of histone methylation"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048538 "thymus development" evidence=IMP] [GO:0048863 "stem
cell differentiation" evidence=IMP] [GO:0051574 "positive
regulation of histone H3-K9 methylation" evidence=IDA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 MGI:MGI:104813
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0001889
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0000122
GO:GO:0048536 GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:CH466546 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 CTD:3720
eggNOG:NOG327026 HOGENOM:HOG000013203 HOVERGEN:HBG052160 KO:K11478
OrthoDB:EOG4KKZ26 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:D31967 EMBL:AK045214 EMBL:AK147226 EMBL:AK164134
EMBL:BC003374 EMBL:BC052444 EMBL:BC060695 IPI:IPI00124575
IPI:IPI00955365 PIR:T30254 RefSeq:NP_001191972.1
RefSeq:NP_001191973.1 RefSeq:NP_068678.1 UniGene:Mm.25059 PDB:2RQ5
PDBsum:2RQ5 ProteinModelPortal:Q62315 SMR:Q62315 DIP:DIP-34312N
IntAct:Q62315 MINT:MINT-4792531 STRING:Q62315 PhosphoSite:Q62315
PRIDE:Q62315 Ensembl:ENSMUST00000044608 Ensembl:ENSMUST00000173246
Ensembl:ENSMUST00000173704 GeneID:16468 KEGG:mmu:16468
UCSC:uc007qgr.1 UCSC:uc007qgv.1 InParanoid:Q3TPU4 ChiTaRS:JARID2
EvolutionaryTrace:Q62315 NextBio:289745 Bgee:Q62315
CleanEx:MM_JARID2 Genevestigator:Q62315
GermOnline:ENSMUSG00000038518 Uniprot:Q62315
Length = 1234
Score = 415 (151.1 bits), Expect = 3.4e-48, Sum P(2) = 3.4e-48
Identities = 123/380 (32%), Positives = 189/380 (49%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWN 368
EP IE EYWR+VE+ + V G ++T GSGFP VG + E + + GWN
Sbjct: 838 EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFP-----VGKS--EPFSRHGWN 889
Query: 369 LNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWY 428
L P GS+L + G + GV +PWL IGM FS+ CW + +HL ++Y+H GA +WY
Sbjct: 890 LTVLPNNTGSILRH-LGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 948
Query: 429 GVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVL 488
+P ++ KLE+ + L +L V +SP +L +G+ V+R VQ +G+FV+
Sbjct: 949 CIPAEEENKLEDVVHTLLQGNGTPGLQMLESNV-MISPEVLCKKGIKVHRTVQQSGQFVV 1007
Query: 489 TFPRAYHSGFNCGFNCAEAVNVAPVDWLPHG-QIAIELYREQGRKTSISHDKLLLGAAR- 546
FP ++ S CG+N +E V+ A W G + A E+ R K S +KLL A+
Sbjct: 1008 CFPGSFVSKVCCGYNVSETVHFATTQWTSMGFETAKEMKRRHIAKP-FSMEKLLYQIAQA 1066
Query: 547 EAVRAHWE-LN----LLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQ 601
EA + + L+ LL + LR + + G+ + A D + +
Sbjct: 1067 EAKKENGPTLSTISALLDELRDTELRQRRLLFEAGLHSSARYGSHDGNSTVADGKKKPRK 1126
Query: 602 TMKMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYA--CLI-HAKNFCSCAWGSKFFL 658
+++E TSER C +C +LS V + + C + H + SC G K +
Sbjct: 1127 WLQLE-----TSERRCQICQHLCYLSMVVQENENVVFCLECALRHVEKQKSCR-GLKL-M 1179
Query: 659 YRYDTSELNILVEALEGKLS 678
YRYD ++ LV + GK+S
Sbjct: 1180 YRYDEEQIISLVNQICGKVS 1199
Score = 168 (64.2 bits), Expect = 3.4e-48, Sum P(2) = 3.4e-48
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFV 202
+++ PV P+ +EF D L YI S+R + E YG+CR++PP W+P C L D FV
Sbjct: 552 MDEIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLN-----DEMRFV 606
Query: 203 TRVQRVDKLQNR 214
T++Q + KL R
Sbjct: 607 TQIQHIHKLGRR 618
>UNIPROTKB|Q92833 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=TAS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0045892 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0007417 GO:GO:0001889 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 GO:GO:0048536 GO:GO:0048538
EMBL:CH471087 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:U57592 EMBL:AK292861 EMBL:AK299349 EMBL:AK303610 EMBL:AL136162
EMBL:AL021938 EMBL:BC046184 EMBL:BC046246 IPI:IPI00023756
IPI:IPI00871836 IPI:IPI00955447 RefSeq:NP_001253969.1
RefSeq:NP_004964.2 UniGene:Hs.269059 ProteinModelPortal:Q92833
SMR:Q92833 DIP:DIP-45494N IntAct:Q92833 STRING:Q92833
PhosphoSite:Q92833 DMDM:61252601 PaxDb:Q92833 PRIDE:Q92833
Ensembl:ENST00000341776 Ensembl:ENST00000397311 GeneID:3720
KEGG:hsa:3720 UCSC:uc003nbj.3 GeneCards:GC06P015246 HGNC:HGNC:6196
HPA:HPA044909 MIM:601594 neXtProt:NX_Q92833 PharmGKB:PA29995
InParanoid:Q92833 OMA:QRLACIK GenomeRNAi:3720 NextBio:14577
ArrayExpress:Q92833 Bgee:Q92833 CleanEx:HS_JARID2
Genevestigator:Q92833 GermOnline:ENSG00000008083 Uniprot:Q92833
Length = 1246
Score = 410 (149.4 bits), Expect = 3.6e-47, Sum P(2) = 3.6e-47
Identities = 123/380 (32%), Positives = 189/380 (49%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWN 368
EP IE EYWR+VE+ + V G ++T GSGFP VG + E + + GWN
Sbjct: 840 EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFP-----VGKS--EPFSRHGWN 891
Query: 369 LNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWY 428
L P GS+L + G + GV +PWL IGM FS+ CW + +HL ++Y+H GA +WY
Sbjct: 892 LTVLPNNTGSILRH-LGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 950
Query: 429 GVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVL 488
+P ++ KLE+ + L +L V +SP +L EG+ V+R VQ +G+FV+
Sbjct: 951 CIPAEEENKLEDVVHTLLQANGTPGLQMLESNV-MISPEVLCKEGIKVHRTVQQSGQFVV 1009
Query: 489 TFPRAYHSGFNCGFNCAEAVNVAPVDWLPHG-QIAIELYREQGRKTSISHDKLLLGAAR- 546
FP ++ S CG++ +E V+ A W G + A E+ R K S +KLL A+
Sbjct: 1010 CFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKP-FSMEKLLYQIAQA 1068
Query: 547 EAVRAHWE-LN----LLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQ 601
EA + + L+ LL + LR + + G+ + A D + +
Sbjct: 1069 EAKKENGPTLSTISALLDELRDTELRQRRQLFEAGLHSSARYGSHDGSSTVADGKKKPRK 1128
Query: 602 TMKMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYA--CLI-HAKNFCSCAWGSKFFL 658
+++E TSER C +C +LS V + + C + H + SC G K +
Sbjct: 1129 WLQLE-----TSERRCQICQHLCYLSMVVQENENVVFCLECALRHVEKQKSCR-GLKL-M 1181
Query: 659 YRYDTSELNILVEALEGKLS 678
YRYD ++ LV + GK+S
Sbjct: 1182 YRYDEEQIISLVNQICGKVS 1201
Score = 164 (62.8 bits), Expect = 3.6e-47, Sum P(2) = 3.6e-47
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFV 202
+++ PV P+ +EF D L YI S+R + E +G+CR++PP W+P C L D FV
Sbjct: 554 MDEIPVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPPPDWRPECKLN-----DEMRFV 608
Query: 203 TRVQRVDKLQNR 214
T++Q + KL R
Sbjct: 609 TQIQHIHKLGRR 620
>ZFIN|ZDB-GENE-061218-1 [details] [associations]
symbol:jarid2a "jumonji, AT rich interactive domain
2a" species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-061218-1 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
EMBL:CR391941 IPI:IPI00799170 Ensembl:ENSDART00000086333
Bgee:E7F6J7 Uniprot:E7F6J7
Length = 1171
Score = 388 (141.6 bits), Expect = 2.5e-43, Sum P(3) = 2.5e-43
Identities = 108/372 (29%), Positives = 184/372 (49%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWN 368
EP +E EYWR+V++ + V G ++T GSGFP VG + E + K GWN
Sbjct: 777 EPDTAEVEKEYWRLVDEKESHVAVHCGR-VDTKTHGSGFP-----VGKS--EPFSKHGWN 828
Query: 369 LNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWY 428
LN GS+L + G + GV +PWL IGM FS+ CW + + L ++Y+H GA +WY
Sbjct: 829 LNVLSNNSGSILRH-LGAVPGVTIPWLNIGMVFSTSCWCRDQNSLPYIDYLHTGADCIWY 887
Query: 429 GVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVL 488
+P ++ KL++ + L ++L + + +SP +L+ +G+ VYR VQ++G+F++
Sbjct: 888 CIPAEEKSKLDKVVHTLLQANGTPGLEMLERNI-MISPEVLRRKGVKVYRTVQHSGQFMV 946
Query: 489 TFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREA 548
FP + + CG++ +E ++ A + W+ G A + + + + S +KLL
Sbjct: 947 CFPGTFVAKVCCGYSVSETMHFANLQWMKLGYEAAKDLKRRRIEEPFSTEKLLYQITT-C 1005
Query: 549 VRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESN 608
R + +L + +LR + + + L+ R S + + + S
Sbjct: 1006 ERDNKQLMTAVSSLFRDLRDAEIRQRRELFEAGLRLSA---RYGTNCESPTERRKQQRSR 1062
Query: 609 F-DATSERECSVCLFDLHLSAVGCHCSSDRYACLIHAKNFCS---CAWGSKFFLYRYDTS 664
F + T++R C VC +LS V H S + CL A + G K ++RY
Sbjct: 1063 FTEDTADRRCQVCQHLCYLSMV-VHESDNVVFCLECALRYIQKRRSPRGLKM-MFRYSEE 1120
Query: 665 ELNILVEALEGK 676
+LN LV + G+
Sbjct: 1121 QLNSLVNRVCGR 1132
Score = 157 (60.3 bits), Expect = 2.5e-43, Sum P(3) = 2.5e-43
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 142 DLEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTF 201
++ + PVFYP EF D L ++ R +AE +G+ R+VPP+ W+P C LKE+ F
Sbjct: 498 EITELPVFYPNTHEFHDPLTFMELARGQAEAFGLFRVVPPAGWRPECKLKEE-----MRF 552
Query: 202 VTRVQRVDKLQNR 214
V+ VQ V KL R
Sbjct: 553 VSYVQHVHKLGRR 565
Score = 37 (18.1 bits), Expect = 2.5e-43, Sum P(3) = 2.5e-43
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 267 GPAFTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIE 316
G +F+L TF + A FS++ + A+ V +E+W LV+ E
Sbjct: 754 GKSFSLTTFFRAARNTMNMCFSKEPDTAE-------VEKEYWR-LVDEKE 795
>TAIR|locus:2146653 [details] [associations]
symbol:ELF6 "EARLY FLOWERING 6" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0048577 "negative regulation
of short-day photoperiodism, flowering" evidence=IMP] [GO:0048579
"negative regulation of long-day photoperiodism, flowering"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IMP]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0009630
"gravitropism" evidence=RCA] [GO:0019344 "cysteine biosynthetic
process" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 GO:GO:0005634 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0003676 GO:GO:0009826 GO:GO:0016702 eggNOG:COG5048
Gene3D:3.30.160.60 GO:GO:0048577 GO:GO:0033169 GO:GO:0009741
EMBL:AL391716 GO:GO:0048579 InterPro:IPR003349 PROSITE:PS51183
EMBL:AY664500 EMBL:AK222064 IPI:IPI00540726 RefSeq:NP_196044.2
UniGene:At.10092 UniGene:At.72547 HSSP:P08151
ProteinModelPortal:Q6BDA0 SMR:Q6BDA0 DIP:DIP-46102N IntAct:Q6BDA0
PRIDE:Q6BDA0 EnsemblPlants:AT5G04240.1 GeneID:830303
KEGG:ath:AT5G04240 TAIR:At5g04240 HOGENOM:HOG000239739
InParanoid:Q6BDA0 OMA:CGEAANF PhylomeDB:Q6BDA0
ProtClustDB:CLSN2681632 ArrayExpress:Q6BDA0 Genevestigator:Q6BDA0
Pfam:PF02375 SMART:SM00545 Uniprot:Q6BDA0
Length = 1340
Score = 405 (147.6 bits), Expect = 5.3e-41, Sum P(2) = 5.3e-41
Identities = 93/225 (41%), Positives = 122/225 (54%)
Query: 324 EKATEEIEVLYGADLETCVFGSGFPKTLNQV----GSASDERYIKSGWNLNNFPRLPGSV 379
EK++ E+E A S K ++ V G+A + S WNL R PGSV
Sbjct: 219 EKSSPEVEKAPLASTSLSSQDSSKQKNMDIVDEMEGTAG-WKLSNSSWNLQMIARSPGSV 277
Query: 380 LSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLE 439
+ DI GV P +YIGM FS F WHVEDH L+S+NY+H G+PK WY VP AL E
Sbjct: 278 TRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNYLHTGSPKTWYAVPCDYALDFE 337
Query: 440 EAMRKHLHDLFEEQPDLLHKL---VTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHS 496
E +RK+ + +Q L +L T +SP ++ + G+P R VQN GEFV+TFPR+YH
Sbjct: 338 EVIRKNSYGRNIDQLAALTQLGEKTTLVSPEMIVASGIPCCRLVQNPGEFVVTFPRSYHV 397
Query: 497 GFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLL 541
GF+ GFNC EA N WL + A +SH +LL
Sbjct: 398 GFSHGFNCGEAANFGTPQWLNVAKEAAVRRAAMNYLPMLSHQQLL 442
Score = 112 (44.5 bits), Expect = 5.3e-41, Sum P(2) = 5.3e-41
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 146 APVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPP 181
APVF PT+ EF D + YI+ I +A +GIC+I+PP
Sbjct: 16 APVFRPTDTEFADPIAYISKIEKEASAFGICKIIPP 51
>TAIR|locus:504955644 [details] [associations]
symbol:REF6 "relative of early flowering 6"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0009741 "response to brassinosteroid
stimulus" evidence=IMP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0003676 GO:GO:0009826
GO:GO:0016702 Gene3D:3.30.160.60 GO:GO:0010228 GO:GO:0048366
GO:GO:0033169 GO:GO:0009741 GO:GO:0035067 EMBL:AL049659
InterPro:IPR003349 PROSITE:PS51183 HSSP:P08151 Pfam:PF02375
SMART:SM00545 EMBL:AY664499 IPI:IPI00537359 PIR:T06699
RefSeq:NP_680116.2 UniGene:At.3169 ProteinModelPortal:Q9STM3
SMR:Q9STM3 DIP:DIP-46006N IntAct:Q9STM3 PaxDb:Q9STM3 PRIDE:Q9STM3
EnsemblPlants:AT3G48430.1 GeneID:824002 KEGG:ath:AT3G48430
TAIR:At3g48430 eggNOG:NOG303077 HOGENOM:HOG000082763
InParanoid:Q9STM3 OMA:ELVINHE PhylomeDB:Q9STM3
ProtClustDB:CLSN2918915 Genevestigator:Q9STM3 Uniprot:Q9STM3
Length = 1360
Score = 384 (140.2 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 99/245 (40%), Positives = 130/245 (53%)
Query: 282 FKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGEYWRIVEKATEEIEVLYGADLETC 341
FKA+ F +KN K G + + +E IE YWR +E Y D+
Sbjct: 131 FKAKNF--EKNYLKKCGKKSQL------SALE-IETLYWRATVDKPFSVE--YANDMP-- 177
Query: 342 VFGSGF-PKTL---NQVGSASDERYI-KSGWNLNNFPRLPGSVLSYESGDISGVLVPWLY 396
GS F P +L + S + + ++ WN+ R GS+L + +I GV P +Y
Sbjct: 178 --GSAFIPLSLAAARRRESGGEGGTVGETAWNMRAMSRAEGSLLKFMKEEIPGVTSPMVY 235
Query: 397 IGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDL 456
+ M FS F WHVEDH L+SLNY+H GA K WYGVP AL EE +R +H EE L
Sbjct: 236 VAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPKDAALAFEEVVR--VHGYGEELNPL 293
Query: 457 -----LHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVA 511
L + T +SP + G+P R VQN GEFV+TFP AYHSGF+ GFN EA N+A
Sbjct: 294 VTFSTLGEKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIA 353
Query: 512 PVDWL 516
+WL
Sbjct: 354 TPEWL 358
Score = 109 (43.4 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 25/50 (50%), Positives = 30/50 (60%)
Query: 146 APVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPI 195
AP F PT EFQD + YI I +A YGIC+I+PP PP P K+ I
Sbjct: 20 APEFRPTLAEFQDPIAYILKIEEEASRYGICKILPPL---PP-PSKKTSI 65
>RGD|1591045 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:1591045 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 eggNOG:NOG317950
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:BC128760 IPI:IPI00767164 RefSeq:NP_001073180.1
RefSeq:XP_003750480.1 RefSeq:XP_003750481.1 UniGene:Rn.202733
ProteinModelPortal:A1A5Q5 SMR:A1A5Q5 PRIDE:A1A5Q5
Ensembl:ENSRNOT00000033932 GeneID:100909834 GeneID:689582
KEGG:rno:100909834 KEGG:rno:689582 UCSC:RGD:1591045 NextBio:738978
Genevestigator:A1A5Q5 Uniprot:A1A5Q5
Length = 510
Score = 363 (132.8 bits), Expect = 3.8e-37, Sum P(2) = 3.8e-37
Identities = 77/175 (44%), Positives = 104/175 (59%)
Query: 367 WNLNNFPRLPGSVLSYESGD-ISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPK 425
WN+ + + +L E G I GV P+LY GM +SF WH ED LYS+NY+H+G PK
Sbjct: 149 WNVGHLGTIQ-DLLEQECGIVIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGQPK 207
Query: 426 MWYGVPGKDALKLEEAMRKHLHDLFEE--QPDLLHKLVTQLSPSILKSEGLPVYRCVQNA 483
WY VP + +LE + K L + Q L HK V +SP++LK G+P R Q A
Sbjct: 208 TWYAVPPEHGRRLE-LLAKELFPGSSQGCQAFLRHK-VALISPTVLKENGIPFGRITQEA 265
Query: 484 GEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHD 538
GEF++TFP YH+GFN GFNCAEA+N A W+ +G++A + + R S S D
Sbjct: 266 GEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKVASQCSCGEAR-VSFSMD 319
Score = 89 (36.4 bits), Expect = 3.8e-37, Sum P(2) = 3.8e-37
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 148 VFYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWK 185
+F PT+EEF D KYIA + + A G+ +++PP W+
Sbjct: 17 IFRPTKEEFNDFDKYIAYMESQGAHRAGLAKVIPPKEWR 55
>MGI|MGI:3606484 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:3606484 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
EMBL:CT485607 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
GeneTree:ENSGT00530000063342 eggNOG:NOG317950 OMA:FASKRWI
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:AK030020 EMBL:AK155227 EMBL:BC112372 IPI:IPI00651810
RefSeq:NP_775609.2 UniGene:Mm.240457 ProteinModelPortal:Q3U2K5
SMR:Q3U2K5 PhosphoSite:Q3U2K5 PRIDE:Q3U2K5 DNASU:244694
Ensembl:ENSMUST00000058796 Ensembl:ENSMUST00000115647 GeneID:244694
KEGG:mmu:244694 UCSC:uc009oen.1 InParanoid:A2CGB5 NextBio:386391
Bgee:Q3U2K5 CleanEx:MM_JMJD2D Genevestigator:Q3U2K5 Uniprot:Q3U2K5
Length = 510
Score = 362 (132.5 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 75/174 (43%), Positives = 103/174 (59%)
Query: 367 WNLNNFPRLPGSVLSYESGD-ISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPK 425
WN+ + + +L E G I GV P+LY GM ++F WH ED LYS+NY+H+G PK
Sbjct: 149 WNVGHLGTIQ-DLLEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQPK 207
Query: 426 MWYGVPGKDALKLEEAMRKHLHDLFEE-QPDLLHKLVTQLSPSILKSEGLPVYRCVQNAG 484
WY VP + +LE R+ + Q L HK V +SP++LK G+P R Q AG
Sbjct: 208 TWYAVPPEHGRRLERLARELFPGSSQGCQAFLRHK-VALISPTVLKENGIPFGRITQEAG 266
Query: 485 EFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHD 538
EF++TFP YH+GFN GFNCAEA+N A W+ +G++A + + R S S D
Sbjct: 267 EFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKVASQCSCGEAR-VSFSMD 319
Score = 89 (36.4 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 148 VFYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWK 185
+F PT+EEF D KYIA + + A G+ +++PP W+
Sbjct: 17 IFRPTKEEFNDFDKYIAYMESQGAHRAGLAKVIPPKEWR 55
>FB|FBgn0036004 [details] [associations]
symbol:Jarid2 "Jumonji, AT rich interactive domain 2"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005719
"nuclear euchromatin" evidence=IDA] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0061085 "regulation of histone H3-K27
methylation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR017956 Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00384 SMART:SM00558 EMBL:AE014296
GO:GO:0003677 GO:GO:0035098 GO:GO:0005719 GO:GO:0005700
Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q24573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0061085 CTD:3720
KO:K11478 GeneTree:ENSGT00530000063118 FlyBase:FBgn0036004
RefSeq:NP_648324.1 UniGene:Dm.29618 ProteinModelPortal:Q9VT00
SMR:Q9VT00 MINT:MINT-1562739 STRING:Q9VT00
EnsemblMetazoa:FBtr0076468 GeneID:39103 KEGG:dme:Dmel_CG3654
UCSC:CG3654-RD InParanoid:Q9VT00 OMA:HESCEPA PhylomeDB:Q9VT00
GenomeRNAi:39103 NextBio:811931 ArrayExpress:Q9VT00 Bgee:Q9VT00
Uniprot:Q9VT00
Length = 2351
Score = 340 (124.7 bits), Expect = 1.6e-36, Sum P(2) = 1.6e-36
Identities = 106/388 (27%), Positives = 173/388 (44%)
Query: 297 LGANTAVLE-EHWEPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVG 355
+ NT L + +P V +E E+WR V + V G+ +++ +G GFP G
Sbjct: 1972 IARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGS-IDSSGWGYGFPSP-GPKG 2029
Query: 356 SASDERYIKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYS 415
S+ Y + WNL GSVL G + GV VP L++GM FS+ CW+ + H L
Sbjct: 2030 KGSN--YARHPWNLKVLTNNSGSVLR-SLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSW 2086
Query: 416 LNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLP 475
+ Y+H GA K+WYG+P + A+ + + + L + P +L G+
Sbjct: 2087 IEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVS 2146
Query: 476 VYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSI 535
+ R Q GEF++ FPRAY S G+ +E+V A + WL + E
Sbjct: 2147 LCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMF 2206
Query: 536 SHDKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKR--VDMERARR 593
S ++LL + R + E L + N D C K+ + L+ E+ +
Sbjct: 2207 SLEQLLFALGYDQ-RVNSEA-LHQMLPMLN----DVCEKESAAREQLRAAGVTSTEKVQA 2260
Query: 594 EFLSSSSQTMKMESNFDATSERECSVCLFDLHLSAVGCHCSSDRYACLIHA-KNFCSCAW 652
E + K + + E EC +C +L++S V + Y CL HA KN +
Sbjct: 2261 E---KGQKAKKQQQPPYKSIESECDLCRANLYISMVRTE-DGNIY-CLQHALKNLNNGNI 2315
Query: 653 GSKF--FLYRYDTSELNILVEALEGKLS 678
+K +Y Y+ ++ L+ L+ K++
Sbjct: 2316 QAKQCKLIYAYNVDDIQQLIRQLQEKIN 2343
Score = 146 (56.5 bits), Expect = 1.6e-36, Sum P(2) = 1.6e-36
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 130 TARWRPEDSCRPDLEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCP 189
TA R +D + + +AP+F PTE+EF D +++I I P A +GIC+I+PP+S+KP C
Sbjct: 1727 TAFPRHDDPTQ--MVEAPIFRPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECR 1784
Query: 190 LKEKPIWDSSTFVTRVQRVDKLQNR 214
+ D F Q V K+ +R
Sbjct: 1785 IS-----DEMRFTAYNQYVHKMLHR 1804
>UNIPROTKB|Q6B0I6 [details] [associations]
symbol:KDM4D "Lysine-specific demethylase 4D" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 EMBL:CH471065 GO:GO:0046872
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 PDB:4HON PDBsum:4HON eggNOG:NOG317950
OMA:FASKRWI HOGENOM:HOG000231125 KO:K06709 EMBL:AK001113
EMBL:AK056162 EMBL:AP002383 EMBL:BC074739 EMBL:BC119010
EMBL:BC122858 EMBL:AL137545 IPI:IPI00017991 PIR:T46388
RefSeq:NP_060509.2 UniGene:Hs.503598 PDB:3DXT PDB:3DXU PDB:4HOO
PDBsum:3DXT PDBsum:3DXU PDBsum:4HOO ProteinModelPortal:Q6B0I6
SMR:Q6B0I6 DIP:DIP-29606N IntAct:Q6B0I6 STRING:Q6B0I6
PhosphoSite:Q6B0I6 DMDM:239938885 PRIDE:Q6B0I6
Ensembl:ENST00000335080 Ensembl:ENST00000536741
Ensembl:ENST00000570915 Ensembl:ENST00000576429 GeneID:55693
KEGG:hsa:55693 UCSC:uc001pfe.3 CTD:55693 GeneCards:GC11P094706
HGNC:HGNC:25498 MIM:609766 neXtProt:NX_Q6B0I6 PharmGKB:PA164721552
InParanoid:Q6B0I6 OrthoDB:EOG4F7NJR PhylomeDB:Q6B0I6
ChEMBL:CHEMBL6138 EvolutionaryTrace:Q6B0I6 GenomeRNAi:55693
NextBio:60511 Bgee:Q6B0I6 CleanEx:HS_JMJD2D Genevestigator:Q6B0I6
GermOnline:ENSG00000186280 Uniprot:Q6B0I6
Length = 523
Score = 355 (130.0 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
Identities = 75/180 (41%), Positives = 100/180 (55%)
Query: 355 GSASDERYIKSGWNLNNFPRLPGSVLSYESGD-ISGVLVPWLYIGMCFSSFCWHVEDHHL 413
GS DE WNL + + +L E G I GV P+LY GM ++F WH ED L
Sbjct: 142 GSLFDEN--TKQWNLGHLGTIQ-DLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDL 198
Query: 414 YSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEG 473
YS+NY+H G PK WY VP + +LE R+ L V +SP++LK G
Sbjct: 199 YSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVALISPTVLKENG 258
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKT 533
+P R Q AGEF++TFP YH+GFN GFNCAEA+N A W+ +G++A + + R T
Sbjct: 259 IPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGEARVT 318
Score = 97 (39.2 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 148 VFYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWK 185
+F+PT+EEF D KYIA + + A G+ +I+PP WK
Sbjct: 20 IFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWK 58
>UNIPROTKB|B2RXH2 [details] [associations]
symbol:KDM4E "Lysine-specific demethylase 4E" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 eggNOG:NOG317950 HOGENOM:HOG000231125 EMBL:AP002383
EMBL:BC157851 EMBL:BC157889 EMBL:BC171916 IPI:IPI00887640
RefSeq:NP_001155102.1 UniGene:Hs.714692 PDB:2W2I PDBsum:2W2I
ProteinModelPortal:B2RXH2 SMR:B2RXH2 PRIDE:B2RXH2
Ensembl:ENST00000450979 Ensembl:ENST00000576054 GeneID:390245
KEGG:hsa:390245 UCSC:uc010ruf.1 CTD:390245 GeneCards:GC11P094759
HGNC:HGNC:37098 neXtProt:NX_B2RXH2 PharmGKB:PA165543440 OMA:PESYELW
OrthoDB:EOG45491F BindingDB:B2RXH2 ChEMBL:CHEMBL1293226
EvolutionaryTrace:B2RXH2 GenomeRNAi:390245 NextBio:103576
Uniprot:B2RXH2
Length = 506
Score = 355 (130.0 bits), Expect = 5.8e-36, Sum P(2) = 5.8e-36
Identities = 79/192 (41%), Positives = 108/192 (56%)
Query: 336 ADLETCVFGS--GFPKTLN-QVGSASDERYIKSGWNLNNFPRLPGSVLSYESGD-ISGVL 391
ADLE + S G P + + E K WNL + + +L E G I GV
Sbjct: 116 ADLEQRYWKSHPGNPPIYGADISGSLFEESTKQ-WNLGHLGTIL-DLLEQECGVVIEGVN 173
Query: 392 VPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFE 451
P+LY GM ++F WH ED LYS+NY+H+G PK WY VP + LE R+ D+
Sbjct: 174 TPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISR 233
Query: 452 EQPDLLHKLVTQLSPSILKSEGLPVYRCV-QNAGEFVLTFPRAYHSGFNCGFNCAEAVNV 510
L V +SP++LK G+P + C+ Q AGEF++TFP YH+GFN GFNCAEA+N
Sbjct: 234 GCEAFLRHKVALISPTVLKENGIP-FNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINF 292
Query: 511 APVDWLPHGQIA 522
A W+ +G++A
Sbjct: 293 ATPRWIDYGKMA 304
Score = 89 (36.4 bits), Expect = 5.8e-36, Sum P(2) = 5.8e-36
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWK 185
FYPT EEF D Y+A + + A G+ +++PP WK
Sbjct: 18 FYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWK 55
>RGD|1307528 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C" species:10116
"Rattus norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=ISO] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 RGD:1307528 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0000790 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0032454 IPI:IPI00959259
Ensembl:ENSRNOT00000009083 UCSC:RGD:1307528 ArrayExpress:F1LS62
Uniprot:F1LS62
Length = 1053
Score = 352 (129.0 bits), Expect = 6.1e-35, Sum P(4) = 6.1e-35
Identities = 70/169 (41%), Positives = 98/169 (57%)
Query: 355 GSASDERYIKSGWNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHL 413
GS DE + WN+ + V+ E G I GV P+LY GM ++F WH ED L
Sbjct: 140 GSIYDEGVDE--WNIARLNTVL-DVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDL 196
Query: 414 YSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEG 473
YS+NY+H+G PK WY +P + +LE + + L +T +SPS+LK G
Sbjct: 197 YSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYG 256
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIA 522
+P + Q AGEF++TFP YH+GFN GFNCAE+ N A V W+ +G++A
Sbjct: 257 IPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVA 305
Score = 89 (36.4 bits), Expect = 6.1e-35, Sum P(4) = 6.1e-35
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F P+ EEF++ KY+A + K A G+ +++PP WKP
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKP 57
Score = 54 (24.1 bits), Expect = 6.1e-35, Sum P(4) = 6.1e-35
Identities = 13/56 (23%), Positives = 30/56 (53%)
Query: 561 NTSDNLRWKD-FCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNFDATSER 615
+T+ ++R++D F G D I + ++RV R + E++ ++S+F ++
Sbjct: 996 STASDMRFEDTFYGADVIQGERKRQRVLSSRLKNEYVDDPVYRTFLKSSFQKKCQK 1051
Score = 48 (22.0 bits), Expect = 6.1e-35, Sum P(4) = 6.1e-35
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 313 ENIEGEYWRIVEKATEEIEVLYGADLETCVFGSG 346
E++E +YW K + +YGAD+ ++ G
Sbjct: 117 EDLERKYW----KNLTFVAPIYGADINGSIYDEG 146
Score = 37 (18.1 bits), Expect = 3.4e-33, Sum P(4) = 3.4e-33
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 610 DATSER-ECSVCLFDLHLSAVGCHCSS 635
D TS CS C +H S +G S
Sbjct: 707 DGTSLLISCSKCFVRVHASNLGSQSQS 733
>MGI|MGI:1924054 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=ISO;IPI]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
MGI:MGI:1924054 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
GO:GO:0006357 GO:GO:0006351 GO:GO:0000790 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
CTD:23081 OMA:DIIQGER EMBL:AK173023 EMBL:AK053104 EMBL:AK081769
EMBL:AK144103 EMBL:BC020180 EMBL:BC042424 IPI:IPI00470006
RefSeq:NP_001165566.1 RefSeq:NP_659036.1 UniGene:Mm.209059
ProteinModelPortal:Q8VCD7 SMR:Q8VCD7 STRING:Q8VCD7
PhosphoSite:Q8VCD7 PRIDE:Q8VCD7 Ensembl:ENSMUST00000030102
Ensembl:ENSMUST00000077851 GeneID:76804 KEGG:mmu:76804
UCSC:uc008tjj.2 InParanoid:Q8VCD7 NextBio:345851 Bgee:Q8VCD7
CleanEx:MM_JMJD2C Genevestigator:Q8VCD7
GermOnline:ENSMUSG00000028397 Uniprot:Q8VCD7
Length = 1054
Score = 352 (129.0 bits), Expect = 6.2e-35, Sum P(4) = 6.2e-35
Identities = 70/169 (41%), Positives = 98/169 (57%)
Query: 355 GSASDERYIKSGWNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHL 413
GS DE + WN+ + V+ E G I GV P+LY GM ++F WH ED L
Sbjct: 140 GSIYDEGVDE--WNIARLNTVL-DVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDL 196
Query: 414 YSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEG 473
YS+NY+H+G PK WY +P + +LE + + L +T +SPS+LK G
Sbjct: 197 YSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYG 256
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIA 522
+P + Q AGEF++TFP YH+GFN GFNCAE+ N A V W+ +G++A
Sbjct: 257 IPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVA 305
Score = 89 (36.4 bits), Expect = 6.2e-35, Sum P(4) = 6.2e-35
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F P+ EEF++ KY+A + K A G+ +++PP WKP
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKP 57
Score = 54 (24.1 bits), Expect = 6.2e-35, Sum P(4) = 6.2e-35
Identities = 13/56 (23%), Positives = 30/56 (53%)
Query: 561 NTSDNLRWKD-FCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNFDATSER 615
+T+ ++R++D F G D I + ++RV R + E++ ++S+F ++
Sbjct: 997 STASDMRFEDTFYGADVIQGERKRQRVLSSRLKNEYVDDPVYRTFLKSSFQKKCQK 1052
Score = 48 (22.0 bits), Expect = 6.2e-35, Sum P(4) = 6.2e-35
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 313 ENIEGEYWRIVEKATEEIEVLYGADLETCVFGSG 346
E++E +YW K + +YGAD+ ++ G
Sbjct: 117 EDLERKYW----KNLTFVAPIYGADINGSIYDEG 146
>FB|FBgn0053182 [details] [associations]
symbol:Kdm4B "Histone demethylase 4B" species:7227
"Drosophila melanogaster" [GO:0016577 "histone demethylation"
evidence=ISS] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=ISS;IDA;IMP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IDA;IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IDA;IMP] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 EMBL:AE013599 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0006351 GO:GO:0016702
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 KO:K06709 RefSeq:NP_001163137.1 RefSeq:NP_001163138.1
RefSeq:NP_001163139.1 RefSeq:NP_788344.2 UniGene:Dm.6975
ProteinModelPortal:Q9V6L0 SMR:Q9V6L0 PaxDb:Q9V6L0
EnsemblMetazoa:FBtr0087770 EnsemblMetazoa:FBtr0302052
EnsemblMetazoa:FBtr0302053 EnsemblMetazoa:FBtr0302054 GeneID:318918
KEGG:dme:Dmel_CG33182 UCSC:CG33182-RA CTD:23030 FlyBase:FBgn0053182
InParanoid:Q9V6L0 OMA:MERWIEY OrthoDB:EOG4NVX19 PhylomeDB:Q9V6L0
GenomeRNAi:318918 NextBio:846567 GermOnline:CG33182 Uniprot:Q9V6L0
Length = 590
Score = 355 (130.0 bits), Expect = 7.0e-35, Sum P(2) = 7.0e-35
Identities = 75/175 (42%), Positives = 106/175 (60%)
Query: 355 GSASDERYIKSGWNLNNFPRLPGSVLSYESGD----ISGVLVPWLYIGMCFSSFCWHVED 410
GS +D + WN+N RL G++L Y + D I GV +LY GM ++F WH ED
Sbjct: 136 GSITDTD--QDSWNIN---RL-GTILDYVNKDYNIQIDGVNTAYLYFGMWKTTFAWHTED 189
Query: 411 HHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEE-QPDLLHKLVTQLSPSIL 469
LYS+NY+H+GAPK WY VP + KLE+ ++ ++ L HK+ T +SP IL
Sbjct: 190 MDLYSINYLHFGAPKTWYVVPPECGRKLEKVANQYFPASYKNCNAYLRHKM-TLISPQIL 248
Query: 470 KSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIE 524
K +PV + Q AGE ++TFP YH+GFN GFNCAE+ N A W+ +G+ A++
Sbjct: 249 KQHDVPVSKITQEAGEIMITFPFGYHAGFNHGFNCAESTNFAMERWIEYGKRAVQ 303
Score = 91 (37.1 bits), Expect = 7.0e-35, Sum P(2) = 7.0e-35
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 148 VFYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
VF PT EEF+D KY+A + + A G+ ++VPP W P
Sbjct: 11 VFRPTWEEFKDFPKYVAYMESQGAHKAGLAKVVPPPEWVP 50
>UNIPROTKB|Q9H3R0 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=IMP;IDA] [GO:0033169 "histone H3-K9
demethylation" evidence=IMP;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0050681 "androgen receptor binding" evidence=IPI]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0000790
GO:GO:0016702 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 Pathway_Interaction_DB:ar_pathway
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
EMBL:AB037901 EMBL:AB018323 EMBL:AK304032 EMBL:AL354707
EMBL:AL137020 EMBL:AL161443 EMBL:AL445592 EMBL:AL513412
EMBL:BC104859 EMBL:BC104861 EMBL:BC143571 IPI:IPI00027642
IPI:IPI00645825 IPI:IPI00878778 RefSeq:NP_001140166.1
RefSeq:NP_001140167.1 RefSeq:NP_001140168.1 RefSeq:NP_055876.2
UniGene:Hs.709425 PDB:2XDP PDB:2XML PDBsum:2XDP PDBsum:2XML
ProteinModelPortal:Q9H3R0 SMR:Q9H3R0 IntAct:Q9H3R0 STRING:Q9H3R0
PhosphoSite:Q9H3R0 DMDM:97536525 PaxDb:Q9H3R0 PRIDE:Q9H3R0
Ensembl:ENST00000381306 Ensembl:ENST00000381309
Ensembl:ENST00000420847 Ensembl:ENST00000543771 GeneID:23081
KEGG:hsa:23081 UCSC:uc003zkg.3 UCSC:uc003zkh.3 CTD:23081
GeneCards:GC09P006720 H-InvDB:HIX0017555 HGNC:HGNC:17071 MIM:605469
neXtProt:NX_Q9H3R0 PharmGKB:PA164721503 InParanoid:Q9H3R0
OMA:DIIQGER PhylomeDB:Q9H3R0 BindingDB:Q9H3R0 ChEMBL:CHEMBL6175
ChiTaRS:KDM4C EvolutionaryTrace:Q9H3R0 GenomeRNAi:23081
NextBio:44205 ArrayExpress:Q9H3R0 Bgee:Q9H3R0 CleanEx:HS_JMJD2C
Genevestigator:Q9H3R0 GermOnline:ENSG00000107077 Uniprot:Q9H3R0
Length = 1056
Score = 352 (129.0 bits), Expect = 7.9e-35, Sum P(4) = 7.9e-35
Identities = 70/169 (41%), Positives = 98/169 (57%)
Query: 355 GSASDERYIKSGWNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHL 413
GS DE + WN+ + V+ E G I GV P+LY GM ++F WH ED L
Sbjct: 140 GSIYDEGVDE--WNIARLNTVL-DVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDL 196
Query: 414 YSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEG 473
YS+NY+H+G PK WY +P + +LE + + L +T +SPS+LK G
Sbjct: 197 YSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYG 256
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIA 522
+P + Q AGEF++TFP YH+GFN GFNCAE+ N A V W+ +G++A
Sbjct: 257 IPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVA 305
Score = 89 (36.4 bits), Expect = 7.9e-35, Sum P(4) = 7.9e-35
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F P+ EEF++ KY+A + K A G+ +++PP WKP
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKP 57
Score = 53 (23.7 bits), Expect = 7.9e-35, Sum P(4) = 7.9e-35
Identities = 13/56 (23%), Positives = 31/56 (55%)
Query: 561 NTSDNLRWKD-FCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNFDATSER 615
+T+ ++R++D F G D I + ++RV R + E+++ ++S+F ++
Sbjct: 999 STASDMRFEDTFYGADIIQGERKRQRVLSSRFKNEYVADPVYRTFLKSSFQKKCQK 1054
Score = 48 (22.0 bits), Expect = 7.9e-35, Sum P(4) = 7.9e-35
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 313 ENIEGEYWRIVEKATEEIEVLYGADLETCVFGSG 346
E++E +YW K + +YGAD+ ++ G
Sbjct: 117 EDLERKYW----KNLTFVAPIYGADINGSIYDEG 146
>ZFIN|ZDB-GENE-030131-6279 [details] [associations]
symbol:kdm4ab "lysine (K)-specific demethylase 4A,
genome duplicate b" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 ZFIN:ZDB-GENE-030131-6279 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
HOGENOM:HOG000231125 OrthoDB:EOG4QRH37 HOVERGEN:HBG080483
IPI:IPI00489014 EMBL:BC047193 UniGene:Dr.24248
ProteinModelPortal:Q802U7 STRING:Q802U7 ArrayExpress:Q802U7
Uniprot:Q802U7
Length = 895
Score = 354 (129.7 bits), Expect = 8.7e-35, Sum P(3) = 8.7e-35
Identities = 71/159 (44%), Positives = 98/159 (61%)
Query: 367 WNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPK 425
WN+ + + +V +ESG I GV P+LY GM ++F WH ED LYS+NY+H+G PK
Sbjct: 145 WNVGHLNTILDTV-EHESGITIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPK 203
Query: 426 MWYGVPGKDALKLEEAMRKHLHDLFEE-QPDLLHKLVTQLSPSILKSEGLPVYRCVQNAG 484
WY VP + +LE + + + L HK+ T +SPSILK G+P + Q AG
Sbjct: 204 SWYTVPPEHGKRLERLAKGFFPGSSQNCEAFLRHKM-TLISPSILKKYGIPFEKITQEAG 262
Query: 485 EFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAI 523
EF++TFP YH+GFN GFNCAE+ N A W+ +G+ AI
Sbjct: 263 EFMVTFPYGYHAGFNHGFNCAESTNFATRRWIDYGKQAI 301
Score = 96 (38.9 bits), Expect = 8.7e-35, Sum P(3) = 8.7e-35
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F+PT EEF++ +YIA + + A G+ +IVPP +WKP
Sbjct: 14 FHPTVEEFKNFSRYIAYMESQGAHKAGLAKIVPPKNWKP 52
Score = 48 (22.0 bits), Expect = 8.7e-35, Sum P(3) = 8.7e-35
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 595 FLSSSS---QTMKMESNFDATSER-ECSVCLFDLHLSAVG 630
F SSS T +E+ D TS+ CSVC +H S G
Sbjct: 694 FTSSSEGHLSTPNLEA--DGTSQLISCSVCSVRVHTSCYG 731
>ZFIN|ZDB-GENE-070705-160 [details] [associations]
symbol:si:ch211-262l3.1 "si:ch211-262l3.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 ZFIN:ZDB-GENE-070705-160 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX640408 EMBL:CABZ01059930
EMBL:CABZ01059931 IPI:IPI00489014 Ensembl:ENSDART00000024302
OMA:VKEWNIC ArrayExpress:F1QNG0 Bgee:F1QNG0 Uniprot:F1QNG0
Length = 895
Score = 354 (129.7 bits), Expect = 8.7e-35, Sum P(3) = 8.7e-35
Identities = 71/159 (44%), Positives = 98/159 (61%)
Query: 367 WNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPK 425
WN+ + + +V +ESG I GV P+LY GM ++F WH ED LYS+NY+H+G PK
Sbjct: 145 WNVGHLNTILDTV-EHESGITIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPK 203
Query: 426 MWYGVPGKDALKLEEAMRKHLHDLFEE-QPDLLHKLVTQLSPSILKSEGLPVYRCVQNAG 484
WY VP + +LE + + + L HK+ T +SPSILK G+P + Q AG
Sbjct: 204 SWYTVPPEHGKRLERLAKGFFPGSSQNCEAFLRHKM-TLISPSILKKYGIPFEKITQEAG 262
Query: 485 EFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAI 523
EF++TFP YH+GFN GFNCAE+ N A W+ +G+ AI
Sbjct: 263 EFMVTFPYGYHAGFNHGFNCAESTNFATRRWIDYGKQAI 301
Score = 96 (38.9 bits), Expect = 8.7e-35, Sum P(3) = 8.7e-35
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F+PT EEF++ +YIA + + A G+ +IVPP +WKP
Sbjct: 14 FHPTVEEFKNFSRYIAYMESQGAHKAGLAKIVPPKNWKP 52
Score = 48 (22.0 bits), Expect = 8.7e-35, Sum P(3) = 8.7e-35
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 595 FLSSSS---QTMKMESNFDATSER-ECSVCLFDLHLSAVG 630
F SSS T +E+ D TS+ CSVC +H S G
Sbjct: 694 FTSSSEGHLSTPNLEA--DGTSQLISCSVCSVRVHTSCYG 731
>UNIPROTKB|F1SMN9 [details] [associations]
symbol:F1SMN9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 OMA:DIIQGER
EMBL:AEMK01181236 EMBL:AEMK01189766 EMBL:CU137711 EMBL:CU481460
EMBL:CU571047 Ensembl:ENSSSCT00000005730 Uniprot:F1SMN9
Length = 1057
Score = 352 (129.0 bits), Expect = 1.0e-34, Sum P(4) = 1.0e-34
Identities = 70/169 (41%), Positives = 98/169 (57%)
Query: 355 GSASDERYIKSGWNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHL 413
GS DE + WN+ + V+ E G I GV P+LY GM ++F WH ED L
Sbjct: 140 GSIYDEGVDE--WNIARLNTVL-DVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDL 196
Query: 414 YSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEG 473
YS+NY+H+G PK WY +P + +LE + + L +T +SPS+LK G
Sbjct: 197 YSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYG 256
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIA 522
+P + Q AGEF++TFP YH+GFN GFNCAE+ N A V W+ +G++A
Sbjct: 257 IPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVA 305
Score = 89 (36.4 bits), Expect = 1.0e-34, Sum P(4) = 1.0e-34
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F P+ EEF++ KY+A + K A G+ +++PP WKP
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKP 57
Score = 52 (23.4 bits), Expect = 1.0e-34, Sum P(4) = 1.0e-34
Identities = 13/56 (23%), Positives = 30/56 (53%)
Query: 561 NTSDNLRWKD-FCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNFDATSER 615
+T+ ++R++D F G D I + ++RV R + E++ ++S+F ++
Sbjct: 1000 STASDMRFEDTFYGADIIQGEKKRQRVLSSRFKNEYVDDPVYRTFLKSSFQKKCQK 1055
Score = 48 (22.0 bits), Expect = 1.0e-34, Sum P(4) = 1.0e-34
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 313 ENIEGEYWRIVEKATEEIEVLYGADLETCVFGSG 346
E++E +YW K + +YGAD+ ++ G
Sbjct: 117 EDLERKYW----KNLTFVAPIYGADINGSIYDEG 146
Score = 47 (21.6 bits), Expect = 3.3e-34, Sum P(4) = 3.3e-34
Identities = 19/71 (26%), Positives = 27/71 (38%)
Query: 551 AHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNFD 610
AH NLL N LR D K D+ R + L + S++ + F
Sbjct: 582 AHQPSNLLLLNHHSFLRLPIILSIDSKTQKTNAVTRDIVRVGGDKLVNFSESEEFTKTFI 641
Query: 611 ATSERECSVCL 621
+ +R C V L
Sbjct: 642 SIRKRHCDVVL 652
>UNIPROTKB|E1BX38 [details] [associations]
symbol:Gga.52669 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AADN02062013
IPI:IPI00735114 Ensembl:ENSGALT00000006511 ArrayExpress:E1BX38
Uniprot:E1BX38
Length = 1095
Score = 360 (131.8 bits), Expect = 6.0e-34, Sum P(2) = 6.0e-34
Identities = 73/161 (45%), Positives = 99/161 (61%)
Query: 367 WNLNNFPRLPGSVLSYESGDI-SGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPK 425
WN+ N L V +E G I GV P+LY GM ++F WH ED LYS+NY+H+G PK
Sbjct: 149 WNIGNLNTLLDMV-EHECGIIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPK 207
Query: 426 MWYGVPGKDALKLEEAMRKHLHDLFEEQPD--LLHKLVTQLSPSILKSEGLPVYRCVQNA 483
WY +P + +LE + K + D L HK+ T +SPSILK G+P R Q A
Sbjct: 208 SWYAIPPEHGKRLER-LAKGFFPGSSQGCDAFLRHKM-TLISPSILKKYGIPFDRITQEA 265
Query: 484 GEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIE 524
GEF++TFP YH+GFN GFNCAE+ N A + W+ +G++A +
Sbjct: 266 GEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKMATQ 306
Score = 91 (37.1 bits), Expect = 6.0e-34, Sum P(2) = 6.0e-34
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F PT EEF++ KY+A I + A G+ +++PP WKP
Sbjct: 18 FRPTLEEFREFGKYVAYIESQGAHRAGLAKVIPPKEWKP 56
>UNIPROTKB|E1C6D5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
EMBL:AADN02012723 EMBL:AADN02012724 IPI:IPI00586868
Ensembl:ENSGALT00000016376 Uniprot:E1C6D5
Length = 1017
Score = 356 (130.4 bits), Expect = 9.3e-34, Sum P(3) = 9.3e-34
Identities = 69/159 (43%), Positives = 98/159 (61%)
Query: 367 WNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPK 425
WN+ + V+ ESG I GV P+LY GM +SF WH ED LYS+NY+H+G PK
Sbjct: 148 WNIGRLNTIL-DVVENESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPK 206
Query: 426 MWYGVPGKDALKLEEAMRKHLHDLFEE-QPDLLHKLVTQLSPSILKSEGLPVYRCVQNAG 484
WY +P + +LE + + + L HK+ T +SPSILK G+P + Q AG
Sbjct: 207 SWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRHKM-TLISPSILKKYGIPFDKVTQEAG 265
Query: 485 EFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAI 523
EF++TFP +YH+GFN GFNCAE+ N A + W+ +G+ ++
Sbjct: 266 EFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYGKQSV 304
Score = 94 (38.1 bits), Expect = 9.3e-34, Sum P(3) = 9.3e-34
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F PT E+F+D +YIA + + A G+ +IVPP WKP
Sbjct: 17 FRPTMEQFRDFSRYIAYVEAQGAHRAGLAKIVPPKEWKP 55
Score = 41 (19.5 bits), Expect = 9.3e-34, Sum P(3) = 9.3e-34
Identities = 21/71 (29%), Positives = 31/71 (43%)
Query: 505 AEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRAHWELNLLKKNTSD 564
AE A D P GQI I ++ GR ++ A+E +E+N + SD
Sbjct: 886 AERAKAALQDLSP-GQIVISKHKN-GRFYQCE----VVSLAKETF---YEVNFDDGSFSD 936
Query: 565 NLRWKDFCGKD 575
NL +D +D
Sbjct: 937 NLYPEDIVSRD 947
>UNIPROTKB|O75164 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IDA] [GO:0016577 "histone demethylation" evidence=IDA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070544 "histone
H3-K36 demethylation" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0019048 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0051864 PDB:2YBP PDB:2YBS PDBsum:2YBP
PDBsum:2YBS PDB:3U4S PDBsum:3U4S CTD:9682 EMBL:AB014577
EMBL:AL451062 EMBL:AC092815 EMBL:BC002558 IPI:IPI00005666
RefSeq:NP_055478.2 UniGene:Hs.155983 PDB:2GF7 PDB:2GFA PDB:2GP3
PDB:2GP5 PDB:2OQ6 PDB:2OQ7 PDB:2OS2 PDB:2OT7 PDB:2OX0 PDB:2P5B
PDB:2PXJ PDB:2Q8C PDB:2Q8D PDB:2Q8E PDB:2QQR PDB:2QQS PDB:2VD7
PDB:2WWJ PDB:2YBK PDB:3NJY PDB:3PDQ PDB:3RVH PDB:4AI9 PDB:4GD4
PDBsum:2GF7 PDBsum:2GFA PDBsum:2GP3 PDBsum:2GP5 PDBsum:2OQ6
PDBsum:2OQ7 PDBsum:2OS2 PDBsum:2OT7 PDBsum:2OX0 PDBsum:2P5B
PDBsum:2PXJ PDBsum:2Q8C PDBsum:2Q8D PDBsum:2Q8E PDBsum:2QQR
PDBsum:2QQS PDBsum:2VD7 PDBsum:2WWJ PDBsum:2YBK PDBsum:3NJY
PDBsum:3PDQ PDBsum:3RVH PDBsum:4AI9 PDBsum:4GD4
ProteinModelPortal:O75164 SMR:O75164 DIP:DIP-29372N IntAct:O75164
MINT:MINT-2829088 STRING:O75164 PhosphoSite:O75164 PRIDE:O75164
Ensembl:ENST00000372396 GeneID:9682 KEGG:hsa:9682 UCSC:uc001cjx.3
GeneCards:GC01P044115 H-InvDB:HIX0020610 HGNC:HGNC:22978
HPA:HPA007610 MIM:609764 neXtProt:NX_O75164 PharmGKB:PA164721403
HOGENOM:HOG000231125 InParanoid:O75164 KO:K06709 OMA:KRTAGCC
OrthoDB:EOG4QRH37 PhylomeDB:O75164 BindingDB:O75164
ChEMBL:CHEMBL5896 ChiTaRS:Kdm4A EvolutionaryTrace:O75164
GenomeRNAi:9682 NextBio:36361 ArrayExpress:O75164 Bgee:O75164
CleanEx:HS_JMJD2A Genevestigator:O75164 GermOnline:ENSG00000066135
Uniprot:O75164
Length = 1064
Score = 346 (126.9 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 70/166 (42%), Positives = 99/166 (59%)
Query: 360 ERYIKSGWNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNY 418
E+++ WN+ R ++ ESG I GV P+LY GM +SF WH ED LYS+NY
Sbjct: 142 EKHVDE-WNIGRL-RTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINY 199
Query: 419 MHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEE-QPDLLHKLVTQLSPSILKSEGLPVY 477
+H+G PK WY VP + +LE + + + L HK+ T +SP +LK G+P
Sbjct: 200 LHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKM-TLISPLMLKKYGIPFD 258
Query: 478 RCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAI 523
+ Q AGEF++TFP YH+GFN GFNCAE+ N A W+ +G+ A+
Sbjct: 259 KVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAV 304
Score = 101 (40.6 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
FYPT EEF++ +YIA I + A G+ ++VPP WKP
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKP 55
>UNIPROTKB|Q5RD88 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9601
"Pongo abelii" [GO:0035064 "methylated histone residue binding"
evidence=ISS] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:9682 KO:K06709 EMBL:CR858028
RefSeq:NP_001125120.1 UniGene:Pab.1791 ProteinModelPortal:Q5RD88
SMR:Q5RD88 GeneID:100172003 KEGG:pon:100172003 InParanoid:Q5RD88
Uniprot:Q5RD88
Length = 1064
Score = 346 (126.9 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 70/166 (42%), Positives = 99/166 (59%)
Query: 360 ERYIKSGWNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNY 418
E+++ WN+ R ++ ESG I GV P+LY GM +SF WH ED LYS+NY
Sbjct: 142 EKHVDE-WNIGRL-RTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINY 199
Query: 419 MHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEE-QPDLLHKLVTQLSPSILKSEGLPVY 477
+H+G PK WY VP + +LE + + + L HK+ T +SP +LK G+P
Sbjct: 200 LHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKM-TLISPLMLKKYGIPFD 258
Query: 478 RCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAI 523
+ Q AGEF++TFP YH+GFN GFNCAE+ N A W+ +G+ A+
Sbjct: 259 KVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAV 304
Score = 101 (40.6 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
FYPT EEF++ +YIA I + A G+ ++VPP WKP
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKP 55
>UNIPROTKB|E1BPL5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:DAAA02009042 IPI:IPI00690786 RefSeq:NP_001193245.1
UniGene:Bt.58925 Ensembl:ENSBTAT00000002687 GeneID:512622
KEGG:bta:512622 NextBio:20870473 Uniprot:E1BPL5
Length = 1066
Score = 346 (126.9 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 70/166 (42%), Positives = 99/166 (59%)
Query: 360 ERYIKSGWNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNY 418
E+++ WN+ R ++ ESG I GV P+LY GM +SF WH ED LYS+NY
Sbjct: 142 EKHVDE-WNIGRL-RTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINY 199
Query: 419 MHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEE-QPDLLHKLVTQLSPSILKSEGLPVY 477
+H+G PK WY VP + +LE + + + L HK+ T +SP +LK G+P
Sbjct: 200 LHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKM-TLISPLMLKKYGIPFD 258
Query: 478 RCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAI 523
+ Q AGEF++TFP YH+GFN GFNCAE+ N A W+ +G+ A+
Sbjct: 259 KVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAV 304
Score = 101 (40.6 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
FYPT EEF++ +YIA I + A G+ ++VPP WKP
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKP 55
>UNIPROTKB|F1PHR7 [details] [associations]
symbol:KDM4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AAEX03007833 EMBL:AAEX03007834 EMBL:AAEX03007835
Ensembl:ENSCAFT00000002249 Uniprot:F1PHR7
Length = 1053
Score = 352 (129.0 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 70/169 (41%), Positives = 98/169 (57%)
Query: 355 GSASDERYIKSGWNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHL 413
GS DE + WN+ + V+ E G I GV P+LY GM ++F WH ED L
Sbjct: 140 GSIYDEDVDE--WNIARLNTVL-DVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDL 196
Query: 414 YSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEG 473
YS+NY+H+G PK WY +P + +LE + + L +T +SPS+LK G
Sbjct: 197 YSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYG 256
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIA 522
+P + Q AGEF++TFP YH+GFN GFNCAE+ N A V W+ +G++A
Sbjct: 257 IPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVA 305
Score = 88 (36.0 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F P+ EEF++ KY+A + K A G+ +++PP WKP
Sbjct: 19 FRPSMEEFREFNKYLAFMESKGAHRAGLAKVIPPREWKP 57
Score = 49 (22.3 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 12/56 (21%), Positives = 30/56 (53%)
Query: 561 NTSDNLRWKD-FCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNFDATSER 615
+T+ ++R++D F G D I + ++R+ R + E++ ++S+F ++
Sbjct: 996 STASDMRFEDTFYGADIIQGEKKRQRMLSSRFKNEYVDDPVYRTFLKSSFQKKCQK 1051
>UNIPROTKB|E1BA41 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 KO:K06709 CTD:23030
OMA:QTEKEAP EMBL:DAAA02019590 EMBL:DAAA02019591 EMBL:DAAA02019592
IPI:IPI00689692 RefSeq:XP_002688966.2 RefSeq:XP_584880.4
Ensembl:ENSBTAT00000020586 GeneID:508141 KEGG:bta:508141
Uniprot:E1BA41
Length = 1116
Score = 349 (127.9 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 70/171 (40%), Positives = 98/171 (57%)
Query: 355 GSASDERYIKSGWNLNNFPRLPGSVLSYESGDI-SGVLVPWLYIGMCFSSFCWHVEDHHL 413
GS D+ + WN+ N R ++ E G I GV P+LY GM ++F WH ED L
Sbjct: 139 GSLYDDDVAQ--WNIGNL-RTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDL 195
Query: 414 YSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEG 473
YS+NY+H+G PK WY +P + +LE + L +T +SP ILK G
Sbjct: 196 YSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYG 255
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIE 524
+P R Q AGEF++TFP YH+GFN GFNCAE+ N A + W+ +G++A +
Sbjct: 256 IPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQ 306
Score = 98 (39.6 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F PT EEF+D KY+A I + A G+ +I+PP WKP
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKP 56
>MGI|MGI:2446210 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0014898 "cardiac muscle hypertrophy in response to stress"
evidence=IMP] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 MGI:MGI:2446210 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 GO:GO:0035064 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC OrthoDB:EOG4QRH37 ChiTaRS:Kdm4A EMBL:AK129187
EMBL:AK054095 EMBL:AK136085 EMBL:AK145066 EMBL:AK145947
EMBL:AL626764 EMBL:BC028866 IPI:IPI00169645 IPI:IPI00648673
RefSeq:NP_001155295.1 RefSeq:NP_759014.2 UniGene:Mm.234234
ProteinModelPortal:Q8BW72 SMR:Q8BW72 STRING:Q8BW72
PhosphoSite:Q8BW72 PRIDE:Q8BW72 Ensembl:ENSMUST00000097911
Ensembl:ENSMUST00000106403 Ensembl:ENSMUST00000106406 GeneID:230674
KEGG:mmu:230674 HOVERGEN:HBG080483 InParanoid:A2A8L8 NextBio:380043
Bgee:Q8BW72 CleanEx:MM_JMJD2A Genevestigator:Q8BW72
GermOnline:ENSMUSG00000033326 Uniprot:Q8BW72
Length = 1064
Score = 345 (126.5 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 69/166 (41%), Positives = 99/166 (59%)
Query: 360 ERYIKSGWNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNY 418
E+++ WN+ + ++ ESG I GV P+LY GM +SF WH ED LYS+NY
Sbjct: 142 EQHVDE-WNIGRLKTIL-DLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINY 199
Query: 419 MHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEE-QPDLLHKLVTQLSPSILKSEGLPVY 477
+H+G PK WY VP + +LE + + + L HK+ T +SP +LK G+P
Sbjct: 200 LHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKM-TLISPLMLKKYGIPFD 258
Query: 478 RCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAI 523
+ Q AGEF++TFP YH+GFN GFNCAE+ N A W+ +G+ A+
Sbjct: 259 KVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAV 304
Score = 101 (40.6 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
FYPT EEF++ +YIA I + A G+ ++VPP WKP
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKP 55
>MGI|MGI:2442355 [details] [associations]
symbol:Kdm4b "lysine (K)-specific demethylase 4B"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 MGI:MGI:2442355
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000231125
KO:K06709 CTD:23030 OrthoDB:EOG4N5VW5 ChiTaRS:KDM4B EMBL:AK129233
EMBL:AK141879 EMBL:BC005480 EMBL:BC007145 IPI:IPI00127444
IPI:IPI00460708 RefSeq:NP_742144.1 UniGene:Mm.45047
ProteinModelPortal:Q91VY5 SMR:Q91VY5 STRING:Q91VY5
PhosphoSite:Q91VY5 PRIDE:Q91VY5 Ensembl:ENSMUST00000025036
GeneID:193796 KEGG:mmu:193796 UCSC:uc008dbu.2 InParanoid:Q91VY5
OMA:QRTRPLI NextBio:371516 Bgee:Q91VY5 CleanEx:MM_JMJD2B
Genevestigator:Q91VY5 GermOnline:ENSMUSG00000024201 Uniprot:Q91VY5
Length = 1086
Score = 352 (129.0 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
Identities = 84/245 (34%), Positives = 127/245 (51%)
Query: 355 GSASDERYIKSGWNLNNFPRLPGSVLSYESGDI-SGVLVPWLYIGMCFSSFCWHVEDHHL 413
GS D+ + WN+ N R ++ E G I GV P+LY GM ++F WH ED L
Sbjct: 139 GSLYDDDVAQ--WNIGNL-RTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDL 195
Query: 414 YSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEG 473
YS+NY+H+G PK WY +P + +LE + L +T +SP ILK G
Sbjct: 196 YSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYG 255
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELY-REQGRK 532
+P R Q AGEF++TFP YH+GFN GFNCAE+ N A + W+ +G++A + R+ K
Sbjct: 256 IPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVK 315
Query: 533 TSISHDKLLLGAAR-EAVRAHWELNLLKKNTSDNLRWKDF----CGKDGILAKALKKRVD 587
S+ +L R E + +L +L L + + I AK L++++
Sbjct: 316 ISMDVFVRILQPERYEQWKQGRDLTVLDHTRPTALSSPELSSWSASRTSIKAKLLRRQIS 375
Query: 588 MERAR 592
++ +R
Sbjct: 376 VKESR 380
Score = 92 (37.4 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F PT +EF+D +Y+A I + A G+ +I+PP WKP
Sbjct: 18 FRPTMDEFRDFNRYVAYIESQGAHRAGLAKIIPPKEWKP 56
>UNIPROTKB|E2RFE0 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:AAEX03009807 EMBL:AAEX03009806 RefSeq:XP_851005.1
Ensembl:ENSCAFT00000007898 GeneID:482530 KEGG:cfa:482530
NextBio:20857109 Uniprot:E2RFE0
Length = 1066
Score = 346 (126.9 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 69/166 (41%), Positives = 99/166 (59%)
Query: 360 ERYIKSGWNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNY 418
E+++ WN+ + ++ ESG I GV P+LY GM +SF WH ED LYS+NY
Sbjct: 142 EKHVDE-WNIGRLKTIL-DLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINY 199
Query: 419 MHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEE-QPDLLHKLVTQLSPSILKSEGLPVY 477
+H+G PK WY VP + +LE + + + L HK+ T +SP +LK G+P
Sbjct: 200 LHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKM-TLISPLMLKKYGIPFD 258
Query: 478 RCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAI 523
+ Q AGEF++TFP YH+GFN GFNCAE+ N A W+ +G+ A+
Sbjct: 259 KVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAV 304
Score = 98 (39.6 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
FYPT EEF++ +Y+A I + A G+ ++VPP WKP
Sbjct: 17 FYPTMEEFRNFSRYMAYIESQGAHRAGLAKVVPPKEWKP 55
>UNIPROTKB|F5GX28 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AC005595
EMBL:AC022517 HGNC:HGNC:29136 ChiTaRS:KDM4B EMBL:AC053467
EMBL:AC093033 EMBL:AC104520 IPI:IPI00922876
ProteinModelPortal:F5GX28 SMR:F5GX28 Ensembl:ENST00000536461
UCSC:uc010xim.2 OMA:QTEKEAP ArrayExpress:F5GX28 Bgee:F5GX28
Uniprot:F5GX28
Length = 1130
Score = 346 (126.9 bits), Expect = 4.6e-33, Sum P(2) = 4.6e-33
Identities = 85/247 (34%), Positives = 128/247 (51%)
Query: 355 GSASDERYIKSGWNLNNFPRLPGSVLSYESGDI-SGVLVPWLYIGMCFSSFCWHVEDHHL 413
GS D+ + WN+ + R ++ E G I GV P+LY GM ++F WH ED L
Sbjct: 139 GSLYDDDVAQ--WNIGSL-RTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDL 195
Query: 414 YSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEG 473
YS+NY+H+G PK WY +P + +LE + L +T +SP ILK G
Sbjct: 196 YSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYG 255
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELY-REQGRK 532
+P R Q AGEF++TFP YH+GFN GFNCAE+ N A + W+ +G++A + R+ K
Sbjct: 256 IPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVK 315
Query: 533 TSISHDKLLLGAAR-EAVRAHWELNLLKKN-----TSDNLR-WKDFCGKDGILAKALKKR 585
S+ +L R E + +L +L TS L W + + AK L+++
Sbjct: 316 ISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALTSPELSSWS--ASRASLKAKLLRRQ 373
Query: 586 VDMERAR 592
+ ++ R
Sbjct: 374 ISLKENR 380
Score = 98 (39.6 bits), Expect = 4.6e-33, Sum P(2) = 4.6e-33
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F PT EEF+D KY+A I + A G+ +I+PP WKP
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKP 56
>UNIPROTKB|O94953 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 EMBL:CH471139 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 KO:K06709 CTD:23030 EMBL:AB020683 EMBL:AC005595
EMBL:AC022517 EMBL:BC063889 EMBL:BC136611 EMBL:AL133622
IPI:IPI00013205 IPI:IPI00440491 PIR:T43460 RefSeq:NP_055830.1
UniGene:Hs.654816 ProteinModelPortal:O94953 SMR:O94953
DIP:DIP-47283N IntAct:O94953 MINT:MINT-1427202 STRING:O94953
PhosphoSite:O94953 PaxDb:O94953 PRIDE:O94953
Ensembl:ENST00000159111 Ensembl:ENST00000381759 GeneID:23030
KEGG:hsa:23030 UCSC:uc002mbq.4 UCSC:uc010xil.1
GeneCards:GC19P004969 HGNC:HGNC:29136 MIM:609765 neXtProt:NX_O94953
PharmGKB:PA164721452 InParanoid:O94953 OrthoDB:EOG4N5VW5
PhylomeDB:O94953 ChiTaRS:KDM4B GenomeRNAi:23030 NextBio:44006
ArrayExpress:O94953 Bgee:O94953 CleanEx:HS_JMJD2B
Genevestigator:O94953 Uniprot:O94953
Length = 1096
Score = 344 (126.2 bits), Expect = 7.0e-33, Sum P(2) = 7.0e-33
Identities = 69/171 (40%), Positives = 98/171 (57%)
Query: 355 GSASDERYIKSGWNLNNFPRLPGSVLSYESGDI-SGVLVPWLYIGMCFSSFCWHVEDHHL 413
GS D+ + WN+ + R ++ E G I GV P+LY GM ++F WH ED L
Sbjct: 139 GSLYDDDVAQ--WNIGSL-RTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDL 195
Query: 414 YSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEG 473
YS+NY+H+G PK WY +P + +LE + L +T +SP ILK G
Sbjct: 196 YSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYG 255
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIE 524
+P R Q AGEF++TFP YH+GFN GFNCAE+ N A + W+ +G++A +
Sbjct: 256 IPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQ 306
Score = 98 (39.6 bits), Expect = 7.0e-33, Sum P(2) = 7.0e-33
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F PT EEF+D KY+A I + A G+ +I+PP WKP
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKP 56
>UNIPROTKB|E2R243 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AAEX03012537
EMBL:AAEX03012538 EMBL:AAEX03012539 Ensembl:ENSCAFT00000030040
Uniprot:E2R243
Length = 1133
Score = 344 (126.2 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 69/171 (40%), Positives = 98/171 (57%)
Query: 355 GSASDERYIKSGWNLNNFPRLPGSVLSYESGDI-SGVLVPWLYIGMCFSSFCWHVEDHHL 413
GS D+ + WN+ + R ++ E G I GV P+LY GM ++F WH ED L
Sbjct: 139 GSLYDDDVAQ--WNIGSL-RTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDL 195
Query: 414 YSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEG 473
YS+NY+H+G PK WY +P + +LE + L +T +SP ILK G
Sbjct: 196 YSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYG 255
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIE 524
+P R Q AGEF++TFP YH+GFN GFNCAE+ N A + W+ +G++A +
Sbjct: 256 IPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQ 306
Score = 98 (39.6 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F PT EEF+D KY+A I + A G+ +I+PP WKP
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKP 56
>ZFIN|ZDB-GENE-120215-3 [details] [associations]
symbol:si:ch211-215f22.3 "si:ch211-215f22.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-120215-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX119315 RefSeq:XP_001921829.2
Ensembl:ENSDART00000151359 GeneID:100003413 KEGG:dre:100003413
Bgee:I3ITH4 Uniprot:I3ITH4
Length = 2012
Score = 348 (127.6 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 69/158 (43%), Positives = 95/158 (60%)
Query: 367 WNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPK 425
WN+ + V ESG I GV P+LY GM S+F WH ED LYS+NY+H+G PK
Sbjct: 151 WNIGRLNTILDMV-ERESGITIKGVNTPYLYFGMWKSTFAWHTEDMDLYSINYLHFGEPK 209
Query: 426 MWYGVPGKDALKLEEAMRKHLHDLFEE-QPDLLHKLVTQLSPSILKSEGLPVYRCVQNAG 484
WY VP + +LE + + + L HK+ T +SPSIL+ G+P + Q AG
Sbjct: 210 SWYVVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKM-TLISPSILRKYGIPFEKVTQEAG 268
Query: 485 EFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIA 522
+F++TFP YH+GFN GFNCAE+ N A W+ +G++A
Sbjct: 269 QFIVTFPYGYHAGFNHGFNCAESTNFATQRWIDYGKLA 306
Score = 99 (39.9 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F+PT+EEF+D +YIA + + A G+ ++VPP WKP
Sbjct: 20 FHPTKEEFKDFNRYIAYMESQGAHRAGMAKVVPPKDWKP 58
>ZFIN|ZDB-GENE-070209-38 [details] [associations]
symbol:zgc:153957 "zgc:153957" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
ZFIN:ZDB-GENE-070209-38 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:CU468286 IPI:IPI00493629
Ensembl:ENSDART00000087729 ArrayExpress:F1QPD2 Bgee:F1QPD2
Uniprot:F1QPD2
Length = 1482
Score = 353 (129.3 bits), Expect = 4.1e-32, Sum P(2) = 4.1e-32
Identities = 67/160 (41%), Positives = 98/160 (61%)
Query: 367 WNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPK 425
WN+ + + V+ + G I GV P+LY GM +SF WH ED LYS+NY+H+G PK
Sbjct: 150 WNIGHLNSVL-DVIEEDCGVSIQGVNTPYLYFGMWKTSFSWHTEDMDLYSINYLHFGEPK 208
Query: 426 MWYGVPGKDALKLEEAMRKHLHDLFEE-QPDLLHKLVTQLSPSILKSEGLPVYRCVQNAG 484
WY +P + +LE + F+ + L HK+ T +SPS+LK +P + Q AG
Sbjct: 209 SWYAIPPEHGKRLERLAIGFFPNSFKSCEAFLRHKM-TLISPSVLKKYSIPFDKITQEAG 267
Query: 485 EFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIE 524
EF++TFP YH+GFN GFNCAE+ N A + W+ +G++A +
Sbjct: 268 EFMITFPYGYHAGFNHGFNCAESTNFASIRWIDYGKLATQ 307
Score = 85 (35.0 bits), Expect = 4.1e-32, Sum P(2) = 4.1e-32
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F PT EEF+D +Y+ + + A G+ +++PP WKP
Sbjct: 19 FRPTMEEFKDFNQYLVYMESQGAHRAGLAKVIPPKGWKP 57
>SGD|S000000971 [details] [associations]
symbol:RPH1 "JmjC domain-containing histone demethylase"
species:4932 "Saccharomyces cerevisiae" [GO:0001078 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IMP;IDA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0043565
"sequence-specific DNA binding" evidence=IMP;IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=IMP;IDA] [GO:0032454 "histone
demethylase activity (H3-K9 specific)" evidence=IDA] [GO:0016577
"histone demethylation" evidence=IMP;IDA] Pfam:PF00096
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 SGD:S000000971
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0043565
GO:GO:0008270 EMBL:BK006939 eggNOG:COG5048 Gene3D:3.30.160.60
EMBL:U18922 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000112726
OrthoDB:EOG4NGKW6 GO:GO:0051864 GO:GO:0032454 PIR:S50672
RefSeq:NP_011096.1 PDB:3OPT PDB:3OPW PDBsum:3OPT PDBsum:3OPW
ProteinModelPortal:P39956 SMR:P39956 DIP:DIP-5418N IntAct:P39956
MINT:MINT-518485 STRING:P39956 PaxDb:P39956 PeptideAtlas:P39956
EnsemblFungi:YER169W GeneID:856916 KEGG:sce:YER169W CYGD:YER169w
OMA:EFLRHKM EvolutionaryTrace:P39956 NextBio:983368
Genevestigator:P39956 GermOnline:YER169W Uniprot:P39956
Length = 796
Score = 337 (123.7 bits), Expect = 8.5e-32, Sum P(2) = 8.5e-32
Identities = 69/179 (38%), Positives = 105/179 (58%)
Query: 349 KTLN----QVGSASDERYIKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSF 404
KTLN G+ + G N+ N +LP ++L + + GV +LY G+ +SF
Sbjct: 174 KTLNFTTPMYGADTPGSIFPEGLNVWNVAKLP-NILDHMETKVPGVNDSYLYAGLWKASF 232
Query: 405 CWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLL-HKLVTQ 463
WH+ED LYS+NY+H+GAPK WY +P +D K + M++ + + P+ L HK+
Sbjct: 233 SWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFPEEAKNCPEFLRHKMFLA 292
Query: 464 LSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIA 522
SP +L+ G+ V + GEF++T+P YH+GFN G+N AE+VN A +WLP G+ A
Sbjct: 293 -SPKLLQENGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKA 350
Score = 90 (36.7 bits), Expect = 8.5e-32, Sum P(2) = 8.5e-32
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 147 PVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWK 185
PVF PT E+F+D Y +I G+ +++PP WK
Sbjct: 15 PVFKPTYEQFEDFYAYCKAINKYGMKSGVVKVIPPKEWK 53
>ZFIN|ZDB-GENE-060503-664 [details] [associations]
symbol:kdm4b "lysine (K)-specific demethylase 4B"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-060503-664
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
HOGENOM:HOG000231125 KO:K06709 HOVERGEN:HBG080483 CTD:23030
OrthoDB:EOG4N5VW5 EMBL:BX927276 OMA:QTEKEAP EMBL:BC171698
EMBL:BC171700 IPI:IPI00775179 RefSeq:NP_001076274.1
UniGene:Dr.81759 SMR:Q1LUQ0 Ensembl:ENSDART00000034084
Ensembl:ENSDART00000128161 GeneID:556504 KEGG:dre:556504
InParanoid:Q1LUQ0 NextBio:20881518 Uniprot:Q1LUQ0
Length = 1134
Score = 341 (125.1 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 67/161 (41%), Positives = 93/161 (57%)
Query: 365 SGWNLNNFPRLPGSVLSYESGD-ISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGA 423
S WN+ + L V E G I GV P+LY GM ++F WH ED LYS+NY+H+G
Sbjct: 227 SEWNIGHLNTLLDMV-EQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGK 285
Query: 424 PKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNA 483
PK WY +P + +LE + + L +T +SPSILK +P R Q
Sbjct: 286 PKSWYAIPPEHGKRLERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKYSIPFDRITQEE 345
Query: 484 GEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIE 524
GEF++TFP YH+GFN GFNCAE+ N A + W+ +G++A +
Sbjct: 346 GEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKMAAQ 386
Score = 94 (38.1 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F PT EEF+D KYIA + + A G+ +++PP WKP
Sbjct: 98 FRPTMEEFKDFGKYIAYMETQGAHVAGLAKVIPPKEWKP 136
Score = 40 (19.1 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 582 LKKRVDMERARREFLS-----SSSQTMKMESNFD 610
LKK+V+++++RR +S S +K E++ D
Sbjct: 594 LKKKVEVKKSRRHPISKPPMRSPHSIVKQEASSD 627
>FB|FBgn0033233 [details] [associations]
symbol:Kdm4A "Histone demethylase 4A" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0016577 "histone demethylation" evidence=ISS] [GO:0051864
"histone demethylase activity (H3-K36 specific)"
evidence=ISS;IDA;IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IMP] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:AE013599 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0006351 GO:GO:0016702 GO:GO:0010628
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 EMBL:AY058636 RefSeq:NP_610331.1 UniGene:Dm.4139
ProteinModelPortal:Q9V333 SMR:Q9V333 MINT:MINT-800097 STRING:Q9V333
PaxDb:Q9V333 PRIDE:Q9V333 EnsemblMetazoa:FBtr0088886 GeneID:35744
KEGG:dme:Dmel_CG15835 UCSC:CG15835-RA CTD:9682 FlyBase:FBgn0033233
InParanoid:Q9V333 OMA:FASKRWI OrthoDB:EOG46T1GM PhylomeDB:Q9V333
GenomeRNAi:35744 NextBio:795007 Bgee:Q9V333 GermOnline:CG15835
Uniprot:Q9V333
Length = 495
Score = 330 (121.2 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 68/169 (40%), Positives = 96/169 (56%)
Query: 355 GSASDERYIKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLY 414
GS SDE WN+ + V + + I GV +LY GM SSF WH ED LY
Sbjct: 145 GSLSDEDL--DVWNIGRLDTILNLVNTDYNIIIDGVNTAYLYFGMWKSSFAWHTEDMDLY 202
Query: 415 SLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEE-QPDLLHKLVTQLSPSILKSEG 473
S+NY+H+GAPK WY +P +LE+ + + ++E L HK+ T +SP +L+
Sbjct: 203 SINYLHFGAPKTWYAIPPAYGRRLEKLANETFSENYQECNAYLRHKM-TMISPKVLRQHN 261
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIA 522
+P + Q AGE ++TFP YH+GFN GFN AE+ N A W+ +G+ A
Sbjct: 262 IPYNKITQEAGEIMITFPFGYHAGFNHGFNGAESTNFASKRWIEYGKRA 310
Score = 73 (30.8 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
F P+ EEFQ+ YI I + A G+ +I PP+ W P
Sbjct: 21 FRPSYEEFQNFSAYIEYIESRGAHLAGLAKIQPPAEWVP 59
>ASPGD|ASPL0000057825 [details] [associations]
symbol:AN1060 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR017956 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00384 SMART:SM00558 GO:GO:0005634
EMBL:BN001308 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0008168 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
EnsemblFungi:CADANIAT00001580 HOGENOM:HOG000206472 OMA:NIEKQRS
Uniprot:C8VTU6
Length = 1405
Score = 356 (130.4 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 80/199 (40%), Positives = 114/199 (57%)
Query: 328 EEIEVLYGADL--ETCVFGSGFPKTLNQVGSASDERYIKSGWNLNNFPRLPGSVLSYESG 385
EE+E Y L ++G+ P GS D+R + WN+ P L L
Sbjct: 320 EELETAYWKSLMFNNPMYGADMP------GSLFDDRI--TSWNVAKLPNL----LDVIGQ 367
Query: 386 DISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKH 445
+ GV +LY+GM ++F WH+ED LYS+NY+H+GAPK WY + +DA + E+AM+
Sbjct: 368 KVPGVNTAYLYLGMWKATFAWHLEDVDLYSINYIHFGAPKQWYSISQEDAPRFEQAMKSI 427
Query: 446 L-HDLFEEQPDLLHKLVTQLSPSILKSE-GLPVYRCVQNAGEFVLTFPRAYHSGFNCGFN 503
D L HK +SPS+LKS+ G+ V + V GEFV+T+P YHSG+N G+N
Sbjct: 428 WPSDAKTCDQFLRHKTYL-VSPSLLKSQYGITVNKMVHYEGEFVITYPYGYHSGYNLGYN 486
Query: 504 CAEAVNVAPVDWLPHGQIA 522
CAE+VN A WL +G++A
Sbjct: 487 CAESVNFATEKWLDYGRVA 505
Score = 61 (26.5 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 147 PVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCP 189
PVF P + FQ +K I ++ G+ +++PP W+ P
Sbjct: 81 PVFKPFRD-FQSFIKRIDKYGMRS---GVVKVIPPKEWRDALP 119
>UNIPROTKB|F1N9S1 [details] [associations]
symbol:F1N9S1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AADN02066264 EMBL:AADN02066265 EMBL:AADN02066266
EMBL:AADN02066267 EMBL:AADN02066268 EMBL:AADN02066269
EMBL:AADN02066270 EMBL:AADN02066271 EMBL:AADN02066272
EMBL:AADN02066273 EMBL:AADN02066274 EMBL:AADN02066275
EMBL:AADN02066276 EMBL:AADN02066277 EMBL:AADN02066278
EMBL:AADN02066279 EMBL:AADN02066280 EMBL:AADN02066281
EMBL:AADN02066282 EMBL:AADN02066283 IPI:IPI00679881
Ensembl:ENSGALT00000032836 Uniprot:F1N9S1
Length = 998
Score = 342 (125.4 bits), Expect = 2.2e-29, Sum P(3) = 2.2e-29
Identities = 65/157 (41%), Positives = 92/157 (58%)
Query: 367 WNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPK 425
WN+ + + V+ + G I GV P+LY GM ++F WH ED LYS+NY+H+G PK
Sbjct: 94 WNIAHLNTIL-DVVGEDCGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPK 152
Query: 426 MWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGE 485
WY +P + +LE + L +T +SPSILK G+P + Q AGE
Sbjct: 153 SWYAIPPEHGKRLERLAQGFFPSSSHGCNAFLRHKMTLISPSILKKYGIPFDKVTQEAGE 212
Query: 486 FVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIA 522
F++TFP YH+GFN GFNCAE+ N A + W+ +G+ A
Sbjct: 213 FMITFPYGYHAGFNHGFNCAESTNFATIRWIDYGKAA 249
Score = 60 (26.2 bits), Expect = 2.2e-29, Sum P(3) = 2.2e-29
Identities = 14/56 (25%), Positives = 31/56 (55%)
Query: 561 NTSDNLRWKD-FCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNFDATSER 615
+T+ ++R++D F G D IL + ++RV R + E++ ++S+F ++
Sbjct: 941 STASDMRFEDTFYGADIILGEKKRQRVLSSRFKNEYVDDPGYRTFLKSSFQKKCQK 996
Score = 48 (22.0 bits), Expect = 2.2e-29, Sum P(3) = 2.2e-29
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 313 ENIEGEYWRIVEKATEEIEVLYGADLETCVFGSG 346
E++E +YW K + +YGAD+ ++ G
Sbjct: 61 EDLERKYW----KNLTFVAPIYGADINGSIYDKG 90
Score = 38 (18.4 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 616 ECSVCLFDLHLSAVGCHCSSDRYACL--IH 643
EC CL + AVG C AC+ IH
Sbjct: 753 EC--CLCPQTVQAVGTWCRDCGRACMGQIH 780
>CGD|CAL0004209 [details] [associations]
symbol:orf19.2730 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0004209
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023
EMBL:AACQ01000025 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
eggNOG:NOG317950 RefSeq:XP_720249.1 RefSeq:XP_720480.1
ProteinModelPortal:Q5AF79 GeneID:3637861 GeneID:3638072
KEGG:cal:CaO19.10244 KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 305 (112.4 bits), Expect = 9.6e-29, Sum P(3) = 9.6e-29
Identities = 60/167 (35%), Positives = 90/167 (53%)
Query: 354 VGSASDERYIKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHL 413
+GS D+ + WN+ + P L L + GV +LY G+ + F WH+ED L
Sbjct: 175 MGSVFDKSI--TAWNVAHLPNL----LDLMEEKLPGVNQAYLYAGLWKALFAWHLEDQDL 228
Query: 414 YSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEG 473
YS+NY+H+GAPK WY +P + M HD F++ + L +SP+ L+ G
Sbjct: 229 YSINYLHFGAPKQWYSIPQSQHEEFYALMVDLFHDEFKQCSEFLRHKTFMVSPAYLEKHG 288
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 520
+ V + GEF++T+P YH+GFN +N AE+VN A DW G+
Sbjct: 289 IRVNHTIHREGEFIITYPYGYHAGFNYDYNLAESVNFALDDWFEFGK 335
Score = 79 (32.9 bits), Expect = 9.6e-29, Sum P(3) = 9.6e-29
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 147 PVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSW 184
PVF PT EF+D + +I GI +++PP+ W
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINNYGMQSGIVKVIPPTQW 60
Score = 50 (22.7 bits), Expect = 9.6e-29, Sum P(3) = 9.6e-29
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 306 EHWEPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTL 351
E+ + + +E YWR + + E +YGAD GS F K++
Sbjct: 146 EYTDDRCKELESNYWRSLSYS----EPMYGAD----TMGSVFDKSI 183
>UNIPROTKB|Q5AF79 [details] [associations]
symbol:RPH2 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004209 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 EMBL:AACQ01000025
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG317950
RefSeq:XP_720249.1 RefSeq:XP_720480.1 ProteinModelPortal:Q5AF79
GeneID:3637861 GeneID:3638072 KEGG:cal:CaO19.10244
KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 305 (112.4 bits), Expect = 9.6e-29, Sum P(3) = 9.6e-29
Identities = 60/167 (35%), Positives = 90/167 (53%)
Query: 354 VGSASDERYIKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHL 413
+GS D+ + WN+ + P L L + GV +LY G+ + F WH+ED L
Sbjct: 175 MGSVFDKSI--TAWNVAHLPNL----LDLMEEKLPGVNQAYLYAGLWKALFAWHLEDQDL 228
Query: 414 YSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEG 473
YS+NY+H+GAPK WY +P + M HD F++ + L +SP+ L+ G
Sbjct: 229 YSINYLHFGAPKQWYSIPQSQHEEFYALMVDLFHDEFKQCSEFLRHKTFMVSPAYLEKHG 288
Query: 474 LPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ 520
+ V + GEF++T+P YH+GFN +N AE+VN A DW G+
Sbjct: 289 IRVNHTIHREGEFIITYPYGYHAGFNYDYNLAESVNFALDDWFEFGK 335
Score = 79 (32.9 bits), Expect = 9.6e-29, Sum P(3) = 9.6e-29
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 147 PVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSW 184
PVF PT EF+D + +I GI +++PP+ W
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINNYGMQSGIVKVIPPTQW 60
Score = 50 (22.7 bits), Expect = 9.6e-29, Sum P(3) = 9.6e-29
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 306 EHWEPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTL 351
E+ + + +E YWR + + E +YGAD GS F K++
Sbjct: 146 EYTDDRCKELESNYWRSLSYS----EPMYGAD----TMGSVFDKSI 183
>CGD|CAL0004229 [details] [associations]
symbol:orf19.2743 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016577 "histone demethylation" evidence=IEA] [GO:0051864
"histone demethylase activity (H3-K36 specific)" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0032454 "histone demethylase activity (H3-K9 specific)"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 CGD:CAL0004229 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 RefSeq:XP_720493.1
ProteinModelPortal:Q5AFV0 GeneID:3637916 KEGG:cal:CaO19.2743
Uniprot:Q5AFV0
Length = 606
Score = 313 (115.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 75/253 (29%), Positives = 126/253 (49%)
Query: 272 LNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPL-VENIE-GEYWRIVEKATEE 329
+ ++KY+ +F+ + ++ + + + E H + + NI EY + +E
Sbjct: 99 IERYKKYS-IFQWKEMAKTRKPPRRKQRGKSETETHSKDIPFYNINTSEY---TDDRCKE 154
Query: 330 IEVLYGADLETC--VFGSGFPKTLNQVGSASDERYIKSGWNLNNFPRLPGSVLSYESGDI 387
+E Y L ++G+ + +GS D+ + WN+ + P L L +
Sbjct: 155 LETNYWRSLSYSEPMYGA------DTMGSVFDKSI--TAWNVAHLPNL----LDLMEEKL 202
Query: 388 SGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLH 447
GV +LY G+ +SF WH+ED LYS+NY+H+GAPK WY +P + M H
Sbjct: 203 PGVNQAYLYAGLWKASFAWHLEDQDLYSINYLHFGAPKQWYSIPQSQHEEFYALMVDLFH 262
Query: 448 DLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEA 507
D F++ + L +SP+ L+ G+ V + GEF++T+P YH+GFN +N AE+
Sbjct: 263 DEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAES 322
Query: 508 VNVAPVDWLPHGQ 520
VN A DW G+
Sbjct: 323 VNFALDDWFEFGK 335
Score = 80 (33.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 147 PVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSW 184
PVF PT EF+D + +I GI +++PP+ W
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINKYGMQSGIVKVIPPTQW 60
>UNIPROTKB|Q5AFV0 [details] [associations]
symbol:RPH1 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004229 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 RefSeq:XP_720493.1 ProteinModelPortal:Q5AFV0
GeneID:3637916 KEGG:cal:CaO19.2743 Uniprot:Q5AFV0
Length = 606
Score = 313 (115.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 75/253 (29%), Positives = 126/253 (49%)
Query: 272 LNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPL-VENIE-GEYWRIVEKATEE 329
+ ++KY+ +F+ + ++ + + + E H + + NI EY + +E
Sbjct: 99 IERYKKYS-IFQWKEMAKTRKPPRRKQRGKSETETHSKDIPFYNINTSEY---TDDRCKE 154
Query: 330 IEVLYGADLETC--VFGSGFPKTLNQVGSASDERYIKSGWNLNNFPRLPGSVLSYESGDI 387
+E Y L ++G+ + +GS D+ + WN+ + P L L +
Sbjct: 155 LETNYWRSLSYSEPMYGA------DTMGSVFDKSI--TAWNVAHLPNL----LDLMEEKL 202
Query: 388 SGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLH 447
GV +LY G+ +SF WH+ED LYS+NY+H+GAPK WY +P + M H
Sbjct: 203 PGVNQAYLYAGLWKASFAWHLEDQDLYSINYLHFGAPKQWYSIPQSQHEEFYALMVDLFH 262
Query: 448 DLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEA 507
D F++ + L +SP+ L+ G+ V + GEF++T+P YH+GFN +N AE+
Sbjct: 263 DEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAES 322
Query: 508 VNVAPVDWLPHGQ 520
VN A DW G+
Sbjct: 323 VNFALDDWFEFGK 335
Score = 80 (33.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 147 PVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSW 184
PVF PT EF+D + +I GI +++PP+ W
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINKYGMQSGIVKVIPPTQW 60
>RGD|1306378 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=ISO] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0035064 "methylated
histone residue binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA;ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
RGD:1306378 GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OrthoDB:EOG4QRH37 EMBL:CH474008 IPI:IPI00949993
RefSeq:NP_001101436.1 UniGene:Rn.95937 Ensembl:ENSRNOT00000066165
GeneID:313539 KEGG:rno:313539 UCSC:RGD:1306378 NextBio:666373
Uniprot:D4A2N4
Length = 971
Score = 345 (126.5 bits), Expect = 6.1e-28, P = 6.1e-28
Identities = 69/166 (41%), Positives = 99/166 (59%)
Query: 360 ERYIKSGWNLNNFPRLPGSVLSYESG-DISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNY 418
E+++ WN+ + ++ ESG I GV P+LY GM +SF WH ED LYS+NY
Sbjct: 51 EQHVDE-WNIGRLKTIL-DLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINY 108
Query: 419 MHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEE-QPDLLHKLVTQLSPSILKSEGLPVY 477
+H+G PK WY VP + +LE + + + L HK+ T +SP +LK G+P
Sbjct: 109 LHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKM-TLISPLMLKKYGIPFD 167
Query: 478 RCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAI 523
+ Q AGEF++TFP YH+GFN GFNCAE+ N A W+ +G+ A+
Sbjct: 168 KVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAV 213
>UNIPROTKB|Q9U297 [details] [associations]
symbol:jmjd-2 "Lysine-specific demethylase 4" species:6239
"Caenorhabditis elegans" [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016702
EMBL:AL110490 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 GO:GO:0051864
eggNOG:NOG317950 KO:K06709 PIR:T27007 RefSeq:NP_496969.2
ProteinModelPortal:Q9U297 SMR:Q9U297 DIP:DIP-26971N
MINT:MINT-1077527 STRING:Q9U297 PaxDb:Q9U297
EnsemblMetazoa:Y48B6A.11 GeneID:175080 KEGG:cel:CELE_Y48B6A.11
UCSC:Y48B6A.11 CTD:175080 WormBase:Y48B6A.11 HOGENOM:HOG000021888
InParanoid:Q9U297 OMA:SSEHADR NextBio:886668 Uniprot:Q9U297
Length = 922
Score = 311 (114.5 bits), Expect = 7.9e-27, Sum P(2) = 7.9e-27
Identities = 63/161 (39%), Positives = 93/161 (57%)
Query: 367 WNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKM 426
WN+N RL G++L + +I GV +LY GM ++F WH ED LYS+N++H+GAPK
Sbjct: 229 WNMN---RL-GTILEDTNYEIKGVNTVYLYFGMYKTTFPWHAEDMDLYSINFLHFGAPKY 284
Query: 427 WYGVPGKDALKLEEAMRKHLHDLFEEQPD----LLHKLVTQLSPSILKSEGLPVYRCVQN 482
W+ + + A + E M + E P L HK ++P +L+ G+P VQ
Sbjct: 285 WFAISSEHADRFERFMSQQFSYQNEYAPQCKAFLRHKTYL-VTPELLRQAGIPYATMVQR 343
Query: 483 AGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAI 523
EF++TFPR YH GFN G+N AE+ N A W+ +G+ A+
Sbjct: 344 PNEFIITFPRGYHMGFNLGYNLAESTNFASQRWIDYGKDAV 384
Score = 157 (60.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 59/236 (25%), Positives = 101/236 (42%)
Query: 371 NFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGV 430
N RL G++L + +I GV +LY GM ++F WH ED LYS+N++H+GAPK W+ +
Sbjct: 230 NMNRL-GTILEDTNYEIKGVNTVYLYFGMYKTTFPWHAEDMDLYSINFLHFGAPKYWFAI 288
Query: 431 PGKDALKLEEAMRKHLHDLFEEQPDLLHKL--VTQLSPSILKSEGLPVYRCVQNAGEFVL 488
+ A + E M + E P L T L L + Y +
Sbjct: 289 SSEHADRFERFMSQQFSYQNEYAPQCKAFLRHKTYLVTPELLRQAGIPYATMVQRPN--- 345
Query: 489 TFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREA 548
F + G++ GFN N+A A + + + G+ D +L +++
Sbjct: 346 EFIITFPRGYHMGFNLG--YNLAEST-----NFASQRWIDYGK------DAVLCDCNKDS 392
Query: 549 VRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLSSSSQTMK 604
V+ + K + W + G KK+ ++ + RR+ L+ +S+ K
Sbjct: 393 VKIDMTHFMAKYRPDEYTTWWTYWYGGGRELWIPKKKKEVPKKRRQSLADASKIAK 448
Score = 73 (30.8 bits), Expect = 7.9e-27, Sum P(2) = 7.9e-27
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 149 FYPTEEEFQDTLKYIASIRPKAEPY--GICRIVPPSSWKP 186
FYPT EF++ +YI I GI +IV P W P
Sbjct: 90 FYPTMREFKNFSQYIKKIEQNGGHLKAGIAKIVAPEGWTP 129
>UNIPROTKB|F5H590 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347 Pfam:PF01388
Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AL136162 EMBL:AL021938 HGNC:HGNC:6196
IPI:IPI01018952 ProteinModelPortal:F5H590 SMR:F5H590 PRIDE:F5H590
Ensembl:ENST00000541660 UCSC:uc011diu.1 ArrayExpress:F5H590
Bgee:F5H590 Uniprot:F5H590
Length = 960
Score = 216 (81.1 bits), Expect = 8.4e-26, Sum P(2) = 8.4e-26
Identities = 48/115 (41%), Positives = 66/115 (57%)
Query: 309 EPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWN 368
EP IE EYWR+VE+ + V G ++T GSGFP VG + E + + GWN
Sbjct: 802 EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFP-----VGKS--EPFSRHGWN 853
Query: 369 LNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGA 423
L P GS+L + G + GV +PWL IGM FS+ CW + +HL ++Y+H GA
Sbjct: 854 LTVLPNNTGSILRH-LGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGA 907
Score = 164 (62.8 bits), Expect = 8.4e-26, Sum P(2) = 8.4e-26
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFV 202
+++ PV P+ +EF D L YI S+R + E +G+CR++PP W+P C L D FV
Sbjct: 516 MDEIPVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPPPDWRPECKLN-----DEMRFV 570
Query: 203 TRVQRVDKLQNR 214
T++Q + KL R
Sbjct: 571 TQIQHIHKLGRR 582
Score = 39 (18.8 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 542 LGAAREAVRAHWELNLLKKNTSDNLR 567
+G + R W L +L NT LR
Sbjct: 841 VGKSEPFSRHGWNLTVLPNNTGSILR 866
>UNIPROTKB|E7EV17 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
EMBL:AL354707 EMBL:AL137020 EMBL:AL161443 EMBL:AL445592
EMBL:AL513412 HGNC:HGNC:17071 ChiTaRS:KDM4C IPI:IPI00910024
ProteinModelPortal:E7EV17 SMR:E7EV17 Ensembl:ENST00000442236
UCSC:uc011lmk.2 ArrayExpress:E7EV17 Bgee:E7EV17 Uniprot:E7EV17
Length = 801
Score = 306 (112.8 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 53/121 (43%), Positives = 76/121 (62%)
Query: 402 SSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLV 461
++F WH ED LYS+NY+H+G PK WY +P + +LE + + L +
Sbjct: 4 TTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKM 63
Query: 462 TQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQI 521
T +SPS+LK G+P + Q AGEF++TFP YH+GFN GFNCAE+ N A V W+ +G++
Sbjct: 64 TLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKV 123
Query: 522 A 522
A
Sbjct: 124 A 124
Score = 53 (23.7 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 13/56 (23%), Positives = 31/56 (55%)
Query: 561 NTSDNLRWKD-FCGKDGILAKALKKRVDMERARREFLSSSSQTMKMESNFDATSER 615
+T+ ++R++D F G D I + ++RV R + E+++ ++S+F ++
Sbjct: 744 STASDMRFEDTFYGADIIQGERKRQRVLSSRFKNEYVADPVYRTFLKSSFQKKCQK 799
>UNIPROTKB|F5GYH2 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL354707 EMBL:AL137020
EMBL:AL161443 EMBL:AL445592 EMBL:AL513412 HGNC:HGNC:17071
ChiTaRS:KDM4C IPI:IPI01018984 ProteinModelPortal:F5GYH2 SMR:F5GYH2
Ensembl:ENST00000536108 ArrayExpress:F5GYH2 Bgee:F5GYH2
Uniprot:F5GYH2
Length = 629
Score = 306 (112.8 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 53/121 (43%), Positives = 76/121 (62%)
Query: 402 SSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLV 461
++F WH ED LYS+NY+H+G PK WY +P + +LE + + L +
Sbjct: 4 TTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKM 63
Query: 462 TQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQI 521
T +SPS+LK G+P + Q AGEF++TFP YH+GFN GFNCAE+ N A V W+ +G++
Sbjct: 64 TLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKV 123
Query: 522 A 522
A
Sbjct: 124 A 124
>UNIPROTKB|C9JGA3 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016
PROSITE:PS51011 SMART:SM00249 SMART:SM00501 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D
IPI:IPI00644852 ProteinModelPortal:C9JGA3 SMR:C9JGA3 STRING:C9JGA3
Ensembl:ENST00000447300 HOGENOM:HOG000174636 ArrayExpress:C9JGA3
Bgee:C9JGA3 Uniprot:C9JGA3
Length = 425
Score = 170 (64.9 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 44/116 (37%), Positives = 62/116 (53%)
Query: 260 ERFGFEPGPA-FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGE 318
E FGFE ++L +F + AD FK+ YF N V H P E +E E
Sbjct: 326 EAFGFEQATQEYSLQSFGEMADSFKSDYF------------NMPV---HMVP-TELVEKE 369
Query: 319 YWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDER-YIKSGWNLNNFP 373
+WR+V E++ V YGAD+ + FGSGFP + ++ + +E+ Y SGWNLN P
Sbjct: 370 FWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMP 425
Score = 161 (61.7 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EFQD L YIA IRP AE GIC+I PP+ W+PP ++ D+ F R
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV----DNFRFTPR 68
Query: 205 VQRVDKLQNRNSMR 218
VQR+++L+ + ++
Sbjct: 69 VQRLNELEAQTRVK 82
>UNIPROTKB|I3LQ64 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 Ensembl:ENSSSCT00000031638
Uniprot:I3LQ64
Length = 911
Score = 203 (76.5 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 41/96 (42%), Positives = 56/96 (58%)
Query: 395 LYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEE-Q 453
LY GM +SF WH ED LYS+NY+H+G PK WY VP + +LE + + +
Sbjct: 162 LYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLESLAKGFFPGSAQSCE 221
Query: 454 PDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLT 489
L HK+ T +SP +LK G+P + Q AGEF+ T
Sbjct: 222 AFLRHKM-TLISPLMLKKYGIPFDKVTQEAGEFMFT 256
Score = 101 (40.6 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
FYPT EEF++ +YIA I + A G+ ++VPP WKP
Sbjct: 17 FYPTVEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKP 55
>UNIPROTKB|I3LVJ1 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005737
GO:GO:0005813 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
Ensembl:ENSSSCT00000026209 Uniprot:I3LVJ1
Length = 916
Score = 203 (76.5 bits), Expect = 7.2e-18, Sum P(2) = 7.2e-18
Identities = 41/96 (42%), Positives = 56/96 (58%)
Query: 395 LYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEE-Q 453
LY GM +SF WH ED LYS+NY+H+G PK WY VP + +LE + + +
Sbjct: 162 LYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLESLAKGFFPGSAQSCE 221
Query: 454 PDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLT 489
L HK+ T +SP +LK G+P + Q AGEF+ T
Sbjct: 222 AFLRHKM-TLISPLMLKKYGIPFDKVTQEAGEFMFT 256
Score = 101 (40.6 bits), Expect = 7.2e-18, Sum P(2) = 7.2e-18
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 149 FYPTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKP 186
FYPT EEF++ +YIA I + A G+ ++VPP WKP
Sbjct: 17 FYPTVEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKP 55
>POMBASE|SPAC343.11c [details] [associations]
symbol:msc1 "multi-copy suppressor of Chk1" species:4896
"Schizosaccharomyces pombe" [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0000812 "Swr1 complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISM] [GO:0006974 "response to DNA damage
stimulus" evidence=IGI] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=ISM] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0019787 "small
conjugating protein ligase activity" evidence=ISM] [GO:0032452
"histone demethylase activity" evidence=ISM] [GO:0043486 "histone
exchange" evidence=IPI] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 PomBase:SPAC343.11c
GO:GO:0007126 EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0016573 GO:GO:0006974
GO:GO:0016706 GO:GO:0000812 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0019787 GO:GO:0000118 OrthoDB:EOG4Z39NV
InterPro:IPR003349 PROSITE:PS51183 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032452 PIR:T38660 RefSeq:NP_593431.1
ProteinModelPortal:Q9UT79 STRING:Q9UT79 EnsemblFungi:SPAC343.11c.1
GeneID:2541710 KEGG:spo:SPAC343.11c NextBio:20802802 Uniprot:Q9UT79
Length = 1588
Score = 230 (86.0 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 66/240 (27%), Positives = 109/240 (45%)
Query: 334 YGADLETCVFGSGFPKTLNQVGSASDERYIKSGWNLN--NFPRLPGSVLSYESGDISGVL 391
Y L T + G T ++ Y WNL +F +L S L + G+L
Sbjct: 457 YPESLPTPLLGRAVNTTA--FPTSRQNAYYNDPWNLYFIHFSKL--SPLRFTP---PGIL 509
Query: 392 VPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFE 451
+ +G + W + L+ ++Y H+GA ++WY +P D K E+ + +
Sbjct: 510 TSTISLGQPLTCQGWQRDSMSLFGMHYHHYGAQRIWYVIPEVDGPKYEKLLNDLSPSFIQ 569
Query: 452 EQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVA 511
E+P+ L K L S+L S G+ V VQN+ EFV+T P Y++ + GF+ +E+V A
Sbjct: 570 EKPETLIKSKILLPISMLISNGIQVLTFVQNSNEFVITSPNTYYTVLDTGFSLSESVPFA 629
Query: 512 PVDWLP--HGQIAIELYREQGRKTSISHDKLLLGAAR--EAVR-AHWELNLLKKNTSDNL 566
+W+ H + + +Y+ S D +LL A + V A+W + LK L
Sbjct: 630 TKEWIQDMHAENSFNMYKNLHISAPFSLDHILLANATLDKTVHSAYWLMTCLKDRVDREL 689
Score = 77 (32.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 151 PTEEEFQDTLKYIASIRPK-AEPYGICRIVPPSSWKPPCPL 190
P +EEF L +I+ + + A G R++PP +WK CPL
Sbjct: 87 PKKEEFSRGLDFISDLYDQTARKSGAVRVIPPDNWK--CPL 125
>SGD|S000002503 [details] [associations]
symbol:GIS1 "Histone demethylase and transcription factor"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0071071 "regulation of phospholipid biosynthetic
process" evidence=IMP] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IC] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0060275 "maintenance of stationary phase
in response to starvation" evidence=IMP] [GO:0001300 "chronological
cell aging" evidence=IMP] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA;IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0016577 "histone
demethylation" evidence=IMP] [GO:0051864 "histone demethylase
activity (H3-K36 specific)" evidence=IMP] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 SGD:S000002503 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0008270
EMBL:BK006938 GO:GO:0001300 GO:GO:0000978 GO:GO:0001077
eggNOG:COG5048 Gene3D:3.30.160.60 EMBL:Z47746 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 PIR:S51245
RefSeq:NP_010381.1 ProteinModelPortal:Q03833 SMR:Q03833
IntAct:Q03833 MINT:MINT-4480789 STRING:Q03833 PaxDb:Q03833
PeptideAtlas:Q03833 EnsemblFungi:YDR096W GeneID:851670
KEGG:sce:YDR096W CYGD:YDR096w GeneTree:ENSGT00530000063342
HOGENOM:HOG000112726 OrthoDB:EOG4NGKW6 NextBio:969289
Genevestigator:Q03833 GermOnline:YDR096W GO:GO:0051864
GO:GO:0060275 GO:GO:0071071 Uniprot:Q03833
Length = 894
Score = 202 (76.2 bits), Expect = 4.6e-14, Sum P(3) = 4.6e-14
Identities = 48/144 (33%), Positives = 75/144 (52%)
Query: 367 WNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKM 426
WNLNN LP S+ S ++G C F WH+++ + S+NY+H+GAPK
Sbjct: 176 WNLNN---LPDSINSSNRRLLTGQ-------SKCI--FPWHLDEQNKCSINYLHFGAPKQ 223
Query: 427 WYGVPGKDALKLEEAMRKHLHDLFEEQPDLL-HK-LVTQLSPSILKSEGLPVYRCVQNAG 484
WY +P + + + + K E P + H+ ++T SP L+ + R VQ
Sbjct: 224 WYSIPSANTDQFLKILSKEPSSNKENCPAFIRHQNIIT--SPDFLRKNNIKFNRVVQFQH 281
Query: 485 EFVLTFPRAYHSGFNCGFNCAEAV 508
EF++TFP +SGFN G+N E++
Sbjct: 282 EFIITFPYCMYSGFNYGYNFGESI 305
Score = 71 (30.1 bits), Expect = 4.6e-14, Sum P(3) = 4.6e-14
Identities = 22/77 (28%), Positives = 33/77 (42%)
Query: 143 LEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSW------KPPCPLKEKPIW 196
++ PVF P+ EF + +I I GI +++PP W PP K I
Sbjct: 9 IDGVPVFKPSMMEFANFQYFIDEITKFGIENGIVKVIPPKEWLELLEGSPPAE-SLKTIQ 67
Query: 197 DSSTFVTRVQRVDKLQN 213
S + +R DK +N
Sbjct: 68 LDSPIQQQAKRWDKHEN 84
Score = 38 (18.4 bits), Expect = 4.6e-14, Sum P(3) = 4.6e-14
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 657 FLYRYDTSELNILVEALEGKLSAVYRWARLDLGLA 691
FL R + LNI EA + +S+ R LG++
Sbjct: 678 FLKRNNVVTLNISREASKSPISSFVNDYRSPLGVS 712
>UNIPROTKB|G4NIH1 [details] [associations]
symbol:MGG_09841 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 EMBL:CM001236
RefSeq:XP_003720398.1 EnsemblFungi:MGG_09841T0 GeneID:2680840
KEGG:mgr:MGG_09841 Uniprot:G4NIH1
Length = 419
Score = 210 (79.0 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 53/140 (37%), Positives = 68/140 (48%)
Query: 375 LPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKD 434
L G+ L E I G+ P+ Y G + F WHVED L SLN++ G K+W+ +P D
Sbjct: 205 LAGNHLD-EYAPIPGLCYPYKYEGTALAPFTWHVEDVGLISLNHLFQGV-KVWFCIPRAD 262
Query: 435 ALKLEEAMRKHLHDLFEEQP---DLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFP 491
L EE R P + T + L+ G+ V VQ AGE V T P
Sbjct: 263 RLAAEEVFRSAPMTATAAIPHHEQFMRHNATLDGHAALRRAGVRVVPVVQRAGEIVATLP 322
Query: 492 RAYHSGFNCGFNCAEAVNVA 511
AYHSGF+ G+ EAVN A
Sbjct: 323 EAYHSGFSAGYTVCEAVNFA 342
>UNIPROTKB|G4MMV6 [details] [associations]
symbol:MGG_02045 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 EMBL:CM001231
RefSeq:XP_003708798.1 EnsemblFungi:MGG_02045T0 GeneID:2681322
KEGG:mgr:MGG_02045 Uniprot:G4MMV6
Length = 1104
Score = 190 (71.9 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 50/137 (36%), Positives = 71/137 (51%)
Query: 387 ISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGV-PG---KDALKLEEAM 442
I G+ P Y G F+ F WH ED L ++NY+H+G K+W+ PG K +EA+
Sbjct: 656 IPGLHTPTCYRGTPFAPFAWHHEDFELGAINYLHYGQ-KIWFVTHPGFFDKATATFQEAL 714
Query: 443 R-KHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCG 501
H F L H+ V L+++ +P +Q AG+ V+ +PRAYHSGF
Sbjct: 715 NIDQDHSQF-----LRHEAVHG-GVQYLRNKDIPTIGFMQEAGQIVVVYPRAYHSGFGAT 768
Query: 502 FNCAEAVNVAPVDW-LP 517
AEAVN A + + LP
Sbjct: 769 ATVAEAVNYADLQYTLP 785
>CGD|CAL0001611 [details] [associations]
symbol:orf19.2476 species:5476 "Candida albicans" [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034630 "RITS complex localization" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0031505 "fungal-type cell wall organization"
evidence=IEA] [GO:0043486 "histone exchange" evidence=IEA]
[GO:0016573 "histone acetylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0031507 "heterochromatin assembly"
evidence=IEA] [GO:0051572 "negative regulation of histone H3-K4
methylation" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 CGD:CAL0001611 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AACQ01000041 InterPro:IPR003349
PROSITE:PS51183 eggNOG:NOG327026 RefSeq:XP_718497.1
ProteinModelPortal:Q5AA08 GeneID:3639891 KEGG:cal:CaO19.2476
Uniprot:Q5AA08
Length = 1684
Score = 127 (49.8 bits), Expect = 4.8e-10, Sum P(4) = 4.8e-10
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 358 SDERYIKS-------GWNLNNFPRLPGSVL-SYESGDISGVLV--PWLYIGMCFSSFCWH 407
+D++YIK WNL+N P LP ++L + + D++ + + IGM FS+ W
Sbjct: 578 NDDQYIKKLFKSALHPWNLHNLPILPNALLGALDKTDVNDYDLNESRINIGMTFSTENWT 637
Query: 408 VEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAM 442
EDH +N+ +GA K WY +P + K E +
Sbjct: 638 CEDHFTNLINFQFFGAVKKWYFIPESEFEKFERLL 672
Score = 109 (43.4 bits), Expect = 4.8e-10, Sum P(4) = 4.8e-10
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 464 LSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAI 523
++P +L S G+ +Q GE ++ FP+ + S + GFN +E VN+A WL + +
Sbjct: 753 ITPELLDSFGIRYTTTIQEPGECIIKFPKTFSSTISFGFNLSEEVNLATKSWLNYALESE 812
Query: 524 ELYREQGRKTSISHDKLLLGAA 545
+ +Q S KLL+ A
Sbjct: 813 KWLAKQNIIPGFSTFKLLVNLA 834
Score = 52 (23.4 bits), Expect = 4.8e-10, Sum P(4) = 4.8e-10
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPP 181
+ P F T E+ +D + +I S+ + YG ++ P
Sbjct: 108 EVPCFSLTPEQTKDPIAFIESVMDVGKEYGAVKVKLP 144
Score = 41 (19.5 bits), Expect = 4.8e-10, Sum P(4) = 4.8e-10
Identities = 26/102 (25%), Positives = 42/102 (41%)
Query: 258 EDERFGFEPGPA--FTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVEN- 314
+D R P A +TL F + D+ K Q F N + N V + + L+ +
Sbjct: 432 DDSRVKAAPKIASIYTLRQFME-KDI-KFQEFLVQNNSIQFNNVN--VTDRN---LISHQ 484
Query: 315 -IEGEYWRIVEKATEE------IEVLYGADLETCVFGSGFPK 349
+E YW + + +E+ G D+ + GSGF K
Sbjct: 485 CLEKLYWEYISSSKGSNLLNFGLELEMGKDIPNYINGSGFVK 526
>UNIPROTKB|F5GZ99 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886
ChiTaRS:KDM5A IPI:IPI00872073 ProteinModelPortal:F5GZ99 SMR:F5GZ99
Ensembl:ENST00000535014 ArrayExpress:F5GZ99 Bgee:F5GZ99
Uniprot:F5GZ99
Length = 126
Score = 153 (58.9 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 32/68 (47%), Positives = 42/68 (61%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTR 204
+ PVF P+ EEF D L +I IRP AE GIC+I PP W+PP + K S F R
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVK----SFRFTPR 73
Query: 205 VQRVDKLQ 212
VQR+++L+
Sbjct: 74 VQRLNELE 81
>SGD|S000004788 [details] [associations]
symbol:ECM5 "Non-essential protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0070211 "Snt2C complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
SGD:S000004788 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:Z49808 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 PIR:S55123
RefSeq:NP_013901.1 ProteinModelPortal:Q03214 SMR:Q03214
DIP:DIP-6678N IntAct:Q03214 MINT:MINT-631320 STRING:Q03214
PaxDb:Q03214 PeptideAtlas:Q03214 PRIDE:Q03214 EnsemblFungi:YMR176W
GeneID:855214 KEGG:sce:YMR176W CYGD:YMR176w eggNOG:KOG1246
OrthoDB:EOG4Z39NV NextBio:978720 Genevestigator:Q03214
GermOnline:YMR176W GO:GO:0070211 InterPro:IPR003349 PROSITE:PS51183
Uniprot:Q03214
Length = 1411
Score = 136 (52.9 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 39/118 (33%), Positives = 60/118 (50%)
Query: 344 GSGFPKTLNQVGS-ASDERY-IKS---GWNLNNFPRLPGSVLSYESGDISGVLVPWLYIG 398
G G P ++ G+ +S+E++ IK+ WNL+N P S+L + D++ IG
Sbjct: 454 GLGLPCSMRSPGNNSSNEKFAIKNILDQWNLDNIPLNELSLLQHLDLDMANFTRTTYDIG 513
Query: 399 MCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEE--AMRKHLHDLFEEQP 454
M FS W V DH L S+++ H G+ K+ Y + KD K E A K D + +P
Sbjct: 514 MLFSCQGWSVSDHFLPSIDFNHLGSTKLVYSIAPKDMEKFEALIARGKSEWDTIQSRP 571
Score = 100 (40.3 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 466 PSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIEL 525
P+ + + G+ +Y+ Q G ++ FP+A+ GF ++ AP WL A +
Sbjct: 634 PNFILANGIKLYKTTQEQGSYIFKFPKAFTCSIGSGFYLSQNAKFAPSSWLRFSSEAAKW 693
Query: 526 YREQGRKTSISHDKLLLGA 544
+ G + ++LL+ A
Sbjct: 694 TSKMGFLPGLDVNQLLINA 712
Score = 40 (19.1 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 147 PVFYPTEEEFQDTLKYIASIRPKAEPYGICR--IVP 180
P F ++E D +K+ + YG + I+P
Sbjct: 119 PTFILAKKELPDPIKFYELVEDLGSVYGCVKLKIIP 154
>POMBASE|SPBP19A11.06 [details] [associations]
symbol:lid2 "Lid2 complex subunit, predicted histone
demethylase Lid2" species:4896 "Schizosaccharomyces pombe"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031507 "heterochromatin
assembly" evidence=IMP] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0034630 "RITS complex
localization" evidence=IMP] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=IDA] [GO:0048189
"Lid2 complex" evidence=IDA] [GO:0051567 "histone H3-K9
methylation" evidence=IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00184 SMART:SM00249 SMART:SM00558 PomBase:SPBP19A11.06
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0030466
GO:GO:0030702 GO:GO:0000070 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031934 GO:GO:0051567
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0048189 GO:GO:0019787
GO:GO:0031507 GO:GO:0051572 GO:GO:0031618 PROSITE:PS51183
GO:GO:0034630 eggNOG:NOG327026 GO:GO:0034647 OrthoDB:EOG44N21B
KO:K11446 PIR:T50313 RefSeq:NP_596174.1 ProteinModelPortal:Q9HDV4
IntAct:Q9HDV4 STRING:Q9HDV4 EnsemblFungi:SPBP19A11.06.1
GeneID:2541299 KEGG:spo:SPBP19A11.06 OMA:LPCVIRE NextBio:20802409
Uniprot:Q9HDV4
Length = 1513
Score = 195 (73.7 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 62/251 (24%), Positives = 109/251 (43%)
Query: 360 ERYIKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYM 419
E+Y WNL+N P + +Y D+S + + L IGM F + W L++
Sbjct: 407 EKYSSEPWNLHNLPFENPCLFNYSFSDLSSLTITRLSIGMVFYTHGWTKSSLSTGLLHHH 466
Query: 420 HWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSPSILKSEGLPVYRC 479
+G WY +P ++ E + E + + L +SPS L G
Sbjct: 467 RFGDTVTWYVLPPDESDAFERYLISSYPQYTMEDLNRSNGLPVIVSPSSLIENGFHPIAI 526
Query: 480 VQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQI--AIELYREQGRKTSISH 537
EF++ P +YH GF+ GF+ E+VN A V+W+ G + +I + + +S+S+
Sbjct: 527 DLRPNEFLVVSPNSYHMGFHQGFSSFESVNFATVNWIKDGLLNSSISVLKSMRIPSSVSY 586
Query: 538 DKLLLGAAREAVRAHWELNLLKKNTSDNLRWKDFCGKDGILAKALKKRVDMERARREFLS 597
+ +++ +L KN + W C +D I ++ K M+ L
Sbjct: 587 EAVIISM------------VLSKNPCFSSEWLIKCFEDMIANESASKNEIMK------LV 628
Query: 598 SSSQTMKMESN 608
+ Q +K+ES+
Sbjct: 629 PNIQALKLESS 639
Score = 41 (19.5 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 174 GICRIVPPSSWKPPCPLKE 192
G +++PP W+ P L +
Sbjct: 84 GAIKLLPPEGWQIPVVLDQ 102
Score = 37 (18.1 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 696 ISRDNMDFDKLS 707
+S+ N+ +DKLS
Sbjct: 935 LSKSNISYDKLS 946
>UNIPROTKB|F5GZR8 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886
ChiTaRS:KDM5A IPI:IPI01011614 ProteinModelPortal:F5GZR8 SMR:F5GZR8
Ensembl:ENST00000543507 ArrayExpress:F5GZR8 Bgee:F5GZR8
Uniprot:F5GZR8
Length = 131
Score = 133 (51.9 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 145 DAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKE-KPIW----DSS 199
+ PVF P+ EEF D L +I IRP AE GIC+I PP W+ K+ +P + S
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKFWQISSVSKDWQPPFACEVKSF 77
Query: 200 TFVTRVQRVDKLQNRNSMR 218
F RVQR+++L+ +R
Sbjct: 78 RFTPRVQRLNELEAMTRVR 96
>POMBASE|SPBC83.07 [details] [associations]
symbol:jmj3 "Lid2 complex subunit, histone demethylase
H3-K36 specific Jmj3" species:4896 "Schizosaccharomyces pombe"
[GO:0000790 "nuclear chromatin" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IC] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IC]
[GO:0016577 "histone demethylation" evidence=ISO] [GO:0048189 "Lid2
complex" evidence=IDA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=ISO] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 PomBase:SPBC83.07 GO:GO:0005829
EMBL:CU329671 GO:GO:0006357 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0000790 GO:GO:0048189 InterPro:IPR003349
PROSITE:PS51183 SMART:SM00545 GO:GO:0051864 PIR:T40696
RefSeq:NP_595639.1 ProteinModelPortal:O94691 STRING:O94691
EnsemblFungi:SPBC83.07.1 GeneID:2540780 KEGG:spo:SPBC83.07
eggNOG:NOG317950 OrthoDB:EOG4WQ4CQ NextBio:20801898 Uniprot:O94691
Length = 752
Score = 114 (45.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 30/108 (27%), Positives = 47/108 (43%)
Query: 395 LYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQP 454
L+ G ++ W VE L+++ G+ WY +P + ++ K D
Sbjct: 201 LFAGKWKTTLPWRVESPELHAVQVHLGGSSLQWYVIPSAHSESFKKLAGKLAQDEHWRCS 260
Query: 455 D-LLHKLVTQLSPSILKSEGLPVYRCVQNAGEFVLTFPRAYHSGFNCG 501
D LLH+ + PS L G+ Y V E ++TFP +HS F G
Sbjct: 261 DFLLHQNIL-FPPSTLVQNGIVTYSTVLKQDELLITFPGTHHSAFCLG 307
Score = 59 (25.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 147 PVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSS 183
PV P EF D +I + + YG ++V PSS
Sbjct: 35 PVVEPKISEFVDMESFIRRVERLGKKYGAIKVVRPSS 71
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.433 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 717 667 0.00098 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 120
No. of states in DFA: 634 (67 KB)
Total size of DFA: 420 KB (2201 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.03u 0.22s 53.25t Elapsed: 00:00:02
Total cpu time: 53.06u 0.22s 53.28t Elapsed: 00:00:02
Start: Mon May 20 15:04:39 2013 End: Mon May 20 15:04:41 2013
WARNINGS ISSUED: 1