BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044391
         (691 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O67915|Y2164_AQUAE Uncharacterized protein aq_2164 OS=Aquifex aeolicus (strain VF5)
           GN=aq_2164 PE=4 SV=1
          Length = 189

 Score = 39.7 bits (91), Expect = 0.092,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 40/162 (24%)

Query: 346 LSDEEILVLHLYREHKAREEFDYAIVWLPI----VDRSIAWDEGYRQKFEQLQAMMPWYT 401
           L +E+ ++++    H+ +E  D  +  +P     ++R+I   +G  +K E+   + PW  
Sbjct: 55  LLEEKKVIMYDATVHENKELTDAFLKGVPTFLMALNRAIHGTKGLFEKLEKGYKVCPW-- 112

Query: 402 VQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQNAFHMLWIWGNLAFPFSAEKE 461
            Q P I++ AV +  K  +KF KK + +                          F+ EK 
Sbjct: 113 -QTPDIVQHAVYRLPKHYYKFLKKCVKL--------------------------FAPEKR 145

Query: 462 AALWKAESWRLELLIDDID-------ATILEWMKEERYICLY 496
             LW +    +EL+++ ID         I + +KE++ I  Y
Sbjct: 146 GKLWISIPENVELVVEKIDRRLNDNYEEIAKMIKEKKSIHTY 187


>sp|Q0JIL1|NRX2_ORYSJ Probable nucleoredoxin 2 OS=Oryza sativa subsp. japonica
           GN=Os01g0794400 PE=2 SV=1
          Length = 394

 Score = 38.9 bits (89), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)

Query: 380 IAWDEGYRQKFEQLQAMMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439
           ++ DE  R  FE+    MPW  V    I      K   E ++      LV + P G ++ 
Sbjct: 82  VSCDEN-RPSFERFHRAMPWPAVPFGDI---GCKKRLSERFQVEGIPRLVVLAPNGEVVQ 137

Query: 440 QNAFHMLWIWGNLAFPFSAEKEAALWKAESWRL 472
            +A  ++  +G+ AFPF++ + A L   E  + 
Sbjct: 138 PDAVELVHRYGDRAFPFTSARVAELEADEQRKF 170


>sp|Q9CEN7|RPOC_LACLA DNA-directed RNA polymerase subunit beta' OS=Lactococcus lactis
            subsp. lactis (strain IL1403) GN=rpoC PE=3 SV=2
          Length = 1207

 Score = 37.7 bits (86), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 11/202 (5%)

Query: 17   DDSAMMKQVQASHAPDGREVDVRPILSIIEDIFRRATPSTIDGVGTREHVDALDNNASPA 76
            DD    + +  S    G+E+ V P+    E +  R T  ++    T E + A D   S  
Sbjct: 816  DDCGTDRGLVISDIATGKEM-VEPLF---ERLVGRYTRKSVLHPETGEMIIADDTLISED 871

Query: 77   ALSGMLDALSCDIRKISCEISCKCSGGEEAHATTMDLFNILSVYSWDAKMVLSLAAFALN 136
                ++DA   ++  I    +CK   G   H   ++L    +V   +A  V ++AA ++ 
Sbjct: 872  VARKIIDAGVKEV-TIRSVFTCKTPHGVCKHCYGINLATGDAVEVGEA--VGTIAAQSIG 928

Query: 137  YGQFWLSAQLCNKNSLAKSMAVLKQLPNVLEHYNALKPQLDALIKVMLDLTKCIVEFKQL 196
                 L+ +  +   +A S  + + LP V E + A  P+ +A+I  +    + IVE    
Sbjct: 929  EPGTQLTMRTFHTGGVASSSDITQGLPRVQEIFEARNPKGEAIITEVTGTVESIVEDPAT 988

Query: 197  PSQYIS----TDAQAMSTAMAD 214
             ++ I+    TD ++ +  MAD
Sbjct: 989  RTREITVKGKTDTRSYTVGMAD 1010


>sp|P33895|NUF2_YEAST Kinetochore protein NUF2 OS=Saccharomyces cerevisiae (strain ATCC
           204508 / S288c) GN=NUF2 PE=1 SV=1
          Length = 451

 Score = 37.4 bits (85), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 12/167 (7%)

Query: 114 FNILSVYSWDAKMVLSLAAFALNYGQFWLSAQLCNKNSLAKSM-AVLKQLPNVLEHYNAL 172
           FN+  +Y  +A+    L +  +NY +F    ++ + NS    M ++L QL +  + YN +
Sbjct: 106 FNMTDLYKPEAQRTQRLLSAVVNYARFR-EERMFDCNSFILQMESLLGQLRSKFDDYNLI 164

Query: 173 KPQLDALIKVMLD-------LTKCIVEFKQLPSQY--ISTDAQAMSTAMADTPAAAYWTF 223
           + QL     V  D       L K   + K+L  Q   ++   + +S    D   +    F
Sbjct: 165 QQQLKQYEDVDGDNIPDEQELQKLEEQNKELEIQLKKLTKIQETLSIDYNDYKISKQSIF 224

Query: 224 RSIVACHSQILSLAGLRDEYTA-SNTDAWELASLAHRVSRILEHFKK 269
           + + A   QI+ L   RD+    SNTD  EL+     ++ +L   KK
Sbjct: 225 KDLEALSFQIVELESNRDKLIKISNTDMEELSEGIKELNDLLIQRKK 271


>sp|P12931|SRC_HUMAN Proto-oncogene tyrosine-protein kinase Src OS=Homo sapiens GN=SRC
           PE=1 SV=3
          Length = 536

 Score = 34.7 bits (78), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 45/209 (21%)

Query: 387 RQKFEQLQAMMPWY-----------TVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQG 435
           R +F  LQ ++ +Y           T   PT  +P     AK+ W+  ++++ + V    
Sbjct: 220 RTQFNSLQQLVAYYSKHADGLCHRLTTVCPTS-KPQTQGLAKDAWEIPRESLRLEVK--- 275

Query: 436 RILNQNAFHMLWI--WGNLAF-------PFSAEKEAALWKAE---SWRLELLI------- 476
             L Q  F  +W+  W            P +   EA L +A+     R E L+       
Sbjct: 276 --LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 333

Query: 477 DDIDATILEWMKEERYICLYGGGDIEWIRRFTTSAKAVARAAQINLGMAYVGKNNAKERF 536
           ++    + E+M +   +    G   +++R      + V  AAQI  GMAYV + N   R 
Sbjct: 334 EEPIYIVTEYMSKGSLLDFLKGETGKYLRL----PQLVDMAAQIASGMAYVERMNYVHRD 389

Query: 537 RKISRIVIQENLSHTLTDPTEVWFFWARL 565
            + + I++ ENL   + D     F  ARL
Sbjct: 390 LRAANILVGENLVCKVAD-----FGLARL 413


>sp|P31693|SRC_RSVPA Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma
           virus (strain PA101T) GN=V-SRC PE=3 SV=3
          Length = 523

 Score = 34.3 bits (77), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 45/209 (21%)

Query: 387 RQKFEQLQAMMPWYTVQH-----------PTIIEPAVVKYAKEVWKFSKKAILVPVDPQG 435
           R +F  LQ ++ +Y+              PT  +P     AK+ W+  ++++ + V    
Sbjct: 214 RTQFSSLQQLVAYYSKHADGLCHRLTNVCPTS-KPQTQGLAKDAWEIPRESLRLEVK--- 269

Query: 436 RILNQNAFHMLWI--WGNLAF-------PFSAEKEAALWKAE---SWRLELLI------- 476
             L Q  F  +W+  W            P +   EA L +A+     R E L+       
Sbjct: 270 --LGQGYFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAMVS 327

Query: 477 DDIDATILEWMKEERYICLYGGGDIEWIRRFTTSAKAVARAAQINLGMAYVGKNNAKERF 536
           ++    ++E+M +   +    G   +++R      + V  AAQI  GMAYV + N   R 
Sbjct: 328 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRL----PQLVEMAAQIASGMAYVERMNYVHRD 383

Query: 537 RKISRIVIQENLSHTLTDPTEVWFFWARL 565
            + + I++ ENL   + D     F  ARL
Sbjct: 384 LRAANILVGENLVCKVAD-----FGLARL 407


>sp|Q9WUD9|SRC_RAT Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus
           GN=Src PE=1 SV=3
          Length = 536

 Score = 33.9 bits (76), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 45/209 (21%)

Query: 387 RQKFEQLQAMMPWY-----------TVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQG 435
           R +F  LQ ++ +Y           T   PT  +P     AK+ W+  ++++ + V    
Sbjct: 220 RTQFNSLQQLVAYYSKHADGLCHRLTTVCPTS-KPQTQGLAKDAWEIPRESLRLEVK--- 275

Query: 436 RILNQNAFHMLWI--WGNLAF-------PFSAEKEAALWKAE---SWRLELLI------- 476
             L Q  F  +W+  W            P +   EA L +A+     R E L+       
Sbjct: 276 --LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 333

Query: 477 DDIDATILEWMKEERYICLYGGGDIEWIRRFTTSAKAVARAAQINLGMAYVGKNNAKERF 536
           ++    + E+M +   +    G   +++R      + V  +AQI  GMAYV + N   R 
Sbjct: 334 EEPIYIVTEYMNKGSLLDFLKGETGKYLRL----PQLVDMSAQIASGMAYVDRMNYVHRD 389

Query: 537 RKISRIVIQENLSHTLTDPTEVWFFWARL 565
            + + I++ ENL   + D     F  ARL
Sbjct: 390 LRAANILVGENLVCKVAD-----FGLARL 413


>sp|P00524|SRC_RSVSA Tyrosine-protein kinase transforming protein Src OS=Avian leukosis
           virus RSA GN=V-SRC PE=1 SV=5
          Length = 526

 Score = 33.9 bits (76), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 43/208 (20%)

Query: 387 RQKFEQLQAMMPWYTVQHPTII----------EPAVVKYAKEVWKFSKKAILVPVDPQGR 436
           R +F  LQ ++ +Y+     +           +P     AK+ W+  ++++ + V     
Sbjct: 217 RTQFSSLQQLVAYYSKHADGLCHRLTNVCPTSKPQTQGLAKDAWEIPRESLRLEVK---- 272

Query: 437 ILNQNAFHMLWI--WGNLAF-------PFSAEKEAALWKAE---SWRLELLI-------D 477
            L Q  F  +W+  W            P +   EA L +A+     R E L+       +
Sbjct: 273 -LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 331

Query: 478 DIDATILEWMKEERYICLYGGGDIEWIRRFTTSAKAVARAAQINLGMAYVGKNNAKERFR 537
           +    + E+M +   +    G   +++R      + V  AAQI  GMAYV + N   R  
Sbjct: 332 EPIYIVTEYMSKGSLLDFLKGEMGKYLRL----PQLVDMAAQIASGMAYVERMNYVHRDL 387

Query: 538 KISRIVIQENLSHTLTDPTEVWFFWARL 565
           + + I++ ENL   + D     F  ARL
Sbjct: 388 RAANILVGENLVCKVAD-----FGLARL 410


>sp|P00525|SRC_AVISR Tyrosine-protein kinase transforming protein Src OS=Avian sarcoma
           virus (strain rASV1441) GN=V-SRC PE=1 SV=3
          Length = 526

 Score = 33.9 bits (76), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 43/208 (20%)

Query: 387 RQKFEQLQAMMPWYTVQHPTII----------EPAVVKYAKEVWKFSKKAILVPVDPQGR 436
           R +F  LQ ++ +Y+     +           +P     AK+ W+  ++++ + V     
Sbjct: 217 RTQFSSLQQLVAYYSKHADGLCHRLTNVCPTSKPQTQGLAKDAWEIPRESLRLEVK---- 272

Query: 437 ILNQNAFHMLWI--WGNLAF-------PFSAEKEAALWKAE---SWRLELLI-------D 477
            L Q  F  +W+  W            P +   EA L +A+     R E L+       +
Sbjct: 273 -LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 331

Query: 478 DIDATILEWMKEERYICLYGGGDIEWIRRFTTSAKAVARAAQINLGMAYVGKNNAKERFR 537
           +    + E+M +   +    G   +++R      + V  AAQI  GMAYV + N   R  
Sbjct: 332 EPIYIVTEYMSKGSLLDFLKGEMGKYLRL----PQLVDMAAQIASGMAYVERMNYVHRDL 387

Query: 538 KISRIVIQENLSHTLTDPTEVWFFWARL 565
           + + I++ ENL   + D     F  ARL
Sbjct: 388 RAANILVGENLVCKVAD-----FGLARL 410


>sp|P05480|SRC_MOUSE Neuronal proto-oncogene tyrosine-protein kinase Src OS=Mus musculus
           GN=Src PE=1 SV=4
          Length = 541

 Score = 33.9 bits (76), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 45/209 (21%)

Query: 387 RQKFEQLQAMMPWY-----------TVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQG 435
           R +F  LQ ++ +Y           T   PT  +P     AK+ W+  ++++ + V    
Sbjct: 225 RTQFNSLQQLVAYYSKHADGLCHRLTTVCPTS-KPQTQGLAKDAWEIPRESLRLEVK--- 280

Query: 436 RILNQNAFHMLWI--WGNLAF-------PFSAEKEAALWKAE---SWRLELLI------- 476
             L Q  F  +W+  W            P +   EA L +A+     R E L+       
Sbjct: 281 --LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 338

Query: 477 DDIDATILEWMKEERYICLYGGGDIEWIRRFTTSAKAVARAAQINLGMAYVGKNNAKERF 536
           ++    + E+M +   +    G   +++R      + V  +AQI  GMAYV + N   R 
Sbjct: 339 EEPIYIVTEYMNKGSLLDFLKGETGKYLRL----PQLVDMSAQIASGMAYVERMNYVHRD 394

Query: 537 RKISRIVIQENLSHTLTDPTEVWFFWARL 565
            + + I++ ENL   + D     F  ARL
Sbjct: 395 LRAANILVGENLVCKVAD-----FGLARL 418


>sp|P14084|SRC_AVISS Tyrosine-protein kinase transforming protein Src OS=Avian sarcoma
           virus (strain S1) GN=V-SRC PE=3 SV=3
          Length = 568

 Score = 33.5 bits (75), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 45/209 (21%)

Query: 387 RQKFEQLQAMMPWYTVQH-----------PTIIEPAVVKYAKEVWKFSKKAILVPVDPQG 435
           R +F  LQ ++ +Y+              PT  +P     AK+ W+  ++++ + V    
Sbjct: 217 RTQFSSLQQLVAYYSKHADGLCHRLTNVCPTS-KPQTQGLAKDAWEIPRESLRLEVK--- 272

Query: 436 RILNQNAFHMLWI--WGNLAF-------PFSAEKEAALWKAE---SWRLELLI------- 476
             L Q  F  +W+  W            P +   EA L +A+     R E L+       
Sbjct: 273 --LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVRLYAVVS 330

Query: 477 DDIDATILEWMKEERYICLYGGGDIEWIRRFTTSAKAVARAAQINLGMAYVGKNNAKERF 536
           ++    + E+M +   +    G   +++R      + V  AAQI  GMAYV + N   R 
Sbjct: 331 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRL----PQLVDMAAQIASGMAYVERMNYVHRD 386

Query: 537 RKISRIVIQENLSHTLTDPTEVWFFWARL 565
            + + I++ ENL   + D     F  ARL
Sbjct: 387 LRAANILVGENLVCKVAD-----FGLARL 410


>sp|A1BES8|ILVD_CHLPD Dihydroxy-acid dehydratase OS=Chlorobium phaeobacteroides (strain
           DSM 266) GN=ilvD PE=3 SV=1
          Length = 565

 Score = 33.5 bits (75), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 10/64 (15%)

Query: 25  VQASHAPDGREVDVRPILSIIEDIFRRATPSTIDGVGTREHVDALDNNASP--AALSGML 82
           ++A H PDG+ VD   ++S+ E + R +T    DG      +  ++ NA P   + SGM 
Sbjct: 147 MKAGHTPDGKTVD---LISVFEAVGRHSTAEITDG-----ELQTIEENACPGCGSCSGMF 198

Query: 83  DALS 86
            A S
Sbjct: 199 TANS 202


>sp|P00523|SRC_CHICK Proto-oncogene tyrosine-protein kinase Src OS=Gallus gallus GN=SRC
           PE=1 SV=4
          Length = 533

 Score = 33.1 bits (74), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 45/209 (21%)

Query: 387 RQKFEQLQAMMPWYTVQH-----------PTIIEPAVVKYAKEVWKFSKKAILVPVDPQG 435
           R +F  LQ ++ +Y+              PT  +P     AK+ W+  ++++ + V    
Sbjct: 217 RTQFSSLQQLVAYYSKHADGLCHRLTNVCPTS-KPQTQGLAKDAWEIPRESLRLEVK--- 272

Query: 436 RILNQNAFHMLWI--WGNLAF-------PFSAEKEAALWKAE---SWRLELLI------- 476
             L Q  F  +W+  W            P +   EA L +A+     R E L+       
Sbjct: 273 --LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 330

Query: 477 DDIDATILEWMKEERYICLYGGGDIEWIRRFTTSAKAVARAAQINLGMAYVGKNNAKERF 536
           ++    + E+M +   +    G   +++R      + V  AAQI  GMAYV + N   R 
Sbjct: 331 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRL----PQLVDMAAQIASGMAYVERMNYVHRD 386

Query: 537 RKISRIVIQENLSHTLTDPTEVWFFWARL 565
            + + I++ ENL   + D     F  ARL
Sbjct: 387 LRAANILVGENLVCKVAD-----FGLARL 410


>sp|P14085|SRC_AVIST Tyrosine-protein kinase transforming protein Src OS=Avian sarcoma
           virus (strain S2) GN=V-SRC PE=3 SV=3
          Length = 557

 Score = 32.7 bits (73), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 45/209 (21%)

Query: 387 RQKFEQLQAMMPWYTVQH-----------PTIIEPAVVKYAKEVWKFSKKAILVPVDPQG 435
           R +F  LQ ++ +Y+              PT  +P     AK+ W+  ++++ + V    
Sbjct: 217 RTQFSSLQQLVAYYSKHADGLCHRLTNVCPTS-KPQTQGLAKDAWEIPRESLRLEVK--- 272

Query: 436 RILNQNAFHMLWI--WGNLAF-------PFSAEKEAALWKAE---SWRLELLI------- 476
             L Q  F  +W+  W            P +   EA L +A+     R E L+       
Sbjct: 273 --LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 330

Query: 477 DDIDATILEWMKEERYICLYGGGDIEWIRRFTTSAKAVARAAQINLGMAYVGKNNAKERF 536
           ++    + E+M +   +    G   +++R      + V  AAQI  GMAYV + N   R 
Sbjct: 331 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRL----PQLVDMAAQIASGMAYVERMNYVHRD 386

Query: 537 RKISRIVIQENLSHTLTDPTEVWFFWARL 565
            + + I++ ENL   + D     F  ARL
Sbjct: 387 LRAANILVGENLVCKVAD-----FGLARL 410


>sp|P07947|YES_HUMAN Tyrosine-protein kinase Yes OS=Homo sapiens GN=YES1 PE=1 SV=3
          Length = 543

 Score = 32.7 bits (73), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 47/210 (22%)

Query: 387 RQKFEQLQAMMPWYTVQH------------PTIIEPAVVKYAKEVWKFSKKAILVPVDPQ 434
           R +F+ LQ ++  YT +H            PT+ +P     AK+ W+  ++++ + V   
Sbjct: 227 RAQFDTLQKLVKHYT-EHADGLCHKLTTVCPTV-KPQTQGLAKDAWEIPRESLRLEVK-- 282

Query: 435 GRILNQNAFHMLWI--WGNLAF-------PFSAEKEAALWKAE---SWRLELLI------ 476
              L Q  F  +W+  W            P +   EA L +A+     R + L+      
Sbjct: 283 ---LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVV 339

Query: 477 -DDIDATILEWMKEERYICLYGGGDIEWIRRFTTSAKAVARAAQINLGMAYVGKNNAKER 535
            ++    + E+M +   +     GD ++++      + V  AAQI  GMAY+ + N   R
Sbjct: 340 SEEPIYIVTEFMSKGSLLDFLKEGDGKYLKL----PQLVDMAAQIADGMAYIERMNYIHR 395

Query: 536 FRKISRIVIQENLSHTLTDPTEVWFFWARL 565
             + + I++ ENL   + D     F  ARL
Sbjct: 396 DLRAANILVGENLVCKIAD-----FGLARL 420


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.134    0.412 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 249,363,684
Number of Sequences: 539616
Number of extensions: 10109701
Number of successful extensions: 23545
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 23542
Number of HSP's gapped (non-prelim): 34
length of query: 691
length of database: 191,569,459
effective HSP length: 124
effective length of query: 567
effective length of database: 124,657,075
effective search space: 70680561525
effective search space used: 70680561525
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)