Query 044391
Match_columns 691
No_of_seqs 141 out of 177
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 04:23:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044391.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044391hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s9f_A Tryparedoxin; thioredox 99.4 1.2E-12 4.1E-17 122.6 13.2 123 322-458 37-164 (165)
2 1i5g_A Tryparedoxin II; electr 99.4 3E-12 1E-16 115.2 13.3 126 319-457 13-143 (144)
3 1o73_A Tryparedoxin; electron 99.4 6.8E-12 2.3E-16 112.3 13.9 124 320-457 15-143 (144)
4 1o8x_A Tryparedoxin, TRYX, TXN 99.3 5E-12 1.7E-16 114.2 11.8 125 320-458 15-144 (146)
5 2lus_A Thioredoxion; CR-Trp16, 98.7 1E-11 3.6E-16 110.4 0.0 114 322-448 12-132 (143)
6 2lrt_A Uncharacterized protein 99.0 8.1E-10 2.8E-14 101.4 9.9 108 319-441 20-130 (152)
7 4fo5_A Thioredoxin-like protei 99.0 6E-10 2E-14 100.2 6.6 107 322-441 20-130 (143)
8 2lrn_A Thiol:disulfide interch 98.9 6.7E-09 2.3E-13 94.2 12.8 110 319-441 14-126 (152)
9 3fw2_A Thiol-disulfide oxidore 98.9 6.8E-09 2.3E-13 94.0 11.6 111 319-441 16-133 (150)
10 3eur_A Uncharacterized protein 98.9 2.9E-09 9.8E-14 95.6 7.1 107 319-441 16-130 (142)
11 3raz_A Thioredoxin-related pro 98.9 9.4E-09 3.2E-13 93.2 10.2 104 322-439 12-120 (151)
12 2ggt_A SCO1 protein homolog, m 98.8 3.2E-08 1.1E-12 90.0 13.4 113 321-440 10-142 (164)
13 3ewl_A Uncharacterized conserv 98.8 5.8E-09 2E-13 93.0 7.4 105 319-439 12-124 (142)
14 3fkf_A Thiol-disulfide oxidore 98.8 2.5E-08 8.5E-13 88.5 10.5 111 319-441 16-131 (148)
15 3hcz_A Possible thiol-disulfid 98.8 4.7E-09 1.6E-13 93.2 4.7 108 319-440 16-127 (148)
16 3gl3_A Putative thiol:disulfid 98.8 2.4E-08 8.1E-13 89.8 9.2 102 323-440 17-121 (152)
17 2lja_A Putative thiol-disulfid 98.7 1.8E-08 6.1E-13 90.6 7.4 108 318-440 14-124 (152)
18 2rli_A SCO2 protein homolog, m 98.7 1.5E-07 5.2E-12 86.3 13.5 114 320-440 12-145 (171)
19 3eyt_A Uncharacterized protein 98.7 4.5E-08 1.5E-12 88.7 9.7 112 323-440 17-133 (158)
20 2f9s_A Thiol-disulfide oxidore 98.7 3.8E-08 1.3E-12 88.7 8.6 106 319-440 11-119 (151)
21 2v1m_A Glutathione peroxidase; 98.6 2.7E-07 9.4E-12 84.2 13.0 119 319-440 16-148 (169)
22 3lor_A Thiol-disulfide isomera 98.6 7.2E-08 2.5E-12 87.3 8.8 113 323-440 19-136 (160)
23 1xzo_A BSSCO, hypothetical pro 98.6 3.4E-07 1.2E-11 84.2 13.2 114 319-440 18-151 (174)
24 2b7k_A SCO1 protein; metalloch 98.6 1.4E-07 4.8E-12 90.9 10.8 115 319-440 26-160 (200)
25 4evm_A Thioredoxin family prot 98.6 6.2E-08 2.1E-12 83.8 7.4 110 320-440 8-120 (138)
26 3or5_A Thiol:disulfide interch 98.6 1.4E-07 4.9E-12 85.6 10.0 109 319-440 19-132 (165)
27 3hdc_A Thioredoxin family prot 98.6 1.5E-07 5.1E-12 86.1 10.0 120 319-457 26-155 (158)
28 2vup_A Glutathione peroxidase- 98.6 2.2E-07 7.4E-12 88.4 11.4 118 319-440 33-166 (190)
29 3drn_A Peroxiredoxin, bacterio 98.6 2.6E-07 9E-12 85.2 11.6 106 318-440 12-126 (161)
30 3dwv_A Glutathione peroxidase- 98.6 9.9E-08 3.4E-12 90.7 8.9 118 319-440 31-164 (187)
31 3me7_A Putative uncharacterize 98.6 2.9E-07 9.8E-12 86.5 11.9 115 319-440 13-142 (170)
32 2h30_A Thioredoxin, peptide me 98.6 6.4E-08 2.2E-12 88.0 6.8 107 322-440 26-137 (164)
33 3ha9_A Uncharacterized thiored 98.6 7.4E-08 2.5E-12 88.3 7.2 104 321-439 24-145 (165)
34 3erw_A Sporulation thiol-disul 98.6 1.4E-07 4.8E-12 83.2 8.6 105 319-439 20-129 (145)
35 3ztl_A Thioredoxin peroxidase; 98.6 1.6E-07 5.4E-12 92.4 9.9 103 323-441 58-176 (222)
36 2p5q_A Glutathione peroxidase 98.6 5E-07 1.7E-11 82.6 12.3 118 319-440 17-149 (170)
37 1lu4_A Soluble secreted antige 98.6 9.8E-08 3.4E-12 83.5 7.3 102 319-438 9-113 (136)
38 3kcm_A Thioredoxin family prot 98.5 2.4E-07 8.1E-12 83.4 9.4 108 318-440 12-122 (154)
39 2bmx_A Alkyl hydroperoxidase C 98.5 1.4E-07 4.9E-12 90.0 7.8 100 325-440 36-147 (195)
40 3gkn_A Bacterioferritin comigr 98.5 4.5E-07 1.5E-11 83.1 10.8 102 321-439 22-139 (163)
41 1jfu_A Thiol:disulfide interch 98.5 7.1E-07 2.4E-11 83.5 12.0 111 318-440 44-159 (186)
42 1xvw_A Hypothetical protein RV 98.5 1.6E-07 5.5E-12 85.6 7.3 108 318-440 19-137 (160)
43 2obi_A PHGPX, GPX-4, phospholi 98.5 6.2E-07 2.1E-11 84.4 11.5 117 319-440 32-165 (183)
44 3cmi_A Peroxiredoxin HYR1; thi 98.5 4.6E-07 1.6E-11 84.2 10.4 117 321-440 19-149 (171)
45 1zzo_A RV1677; thioredoxin fol 98.5 1.5E-07 5E-12 82.0 6.5 100 321-438 12-115 (136)
46 3u5r_E Uncharacterized protein 98.5 2E-07 6.7E-12 91.2 7.7 113 317-440 41-159 (218)
47 2gs3_A PHGPX, GPX-4, phospholi 98.5 9.7E-07 3.3E-11 83.5 12.2 118 319-440 34-167 (185)
48 2k6v_A Putative cytochrome C o 98.5 3.2E-07 1.1E-11 84.0 8.6 112 320-441 22-153 (172)
49 4hde_A SCO1/SENC family lipopr 98.5 1.5E-06 5.2E-11 82.0 13.0 116 317-439 15-148 (170)
50 1we0_A Alkyl hydroperoxide red 98.5 6.4E-07 2.2E-11 84.6 10.4 99 326-440 23-134 (187)
51 2cvb_A Probable thiol-disulfid 98.4 4.8E-07 1.7E-11 84.9 9.2 109 319-440 18-132 (188)
52 3kij_A Probable glutathione pe 98.4 1.8E-06 6E-11 81.2 12.8 117 319-440 23-151 (180)
53 2l5o_A Putative thioredoxin; s 98.4 3E-06 1E-10 76.0 13.0 108 318-440 12-122 (153)
54 3lwa_A Secreted thiol-disulfid 98.4 7.1E-07 2.4E-11 83.4 9.1 109 323-440 48-162 (183)
55 2b5x_A YKUV protein, TRXY; thi 98.4 1.7E-06 5.8E-11 76.5 11.0 106 323-440 18-126 (148)
56 1zof_A Alkyl hydroperoxide-red 98.4 3.1E-07 1E-11 87.7 6.3 108 323-441 18-139 (198)
57 2h01_A 2-Cys peroxiredoxin; th 98.4 9.5E-07 3.3E-11 83.9 9.5 103 323-441 17-137 (192)
58 3ixr_A Bacterioferritin comigr 98.4 1.3E-06 4.3E-11 82.8 10.3 103 321-440 38-156 (179)
59 3kh7_A Thiol:disulfide interch 98.4 4.4E-07 1.5E-11 85.4 7.0 97 325-440 49-148 (176)
60 1zye_A Thioredoxin-dependent p 98.4 1.2E-06 4.1E-11 86.1 10.2 104 321-440 43-162 (220)
61 3qpm_A Peroxiredoxin; oxidored 98.4 1.6E-06 5.5E-11 86.9 11.3 102 323-440 66-183 (240)
62 3ia1_A THIO-disulfide isomeras 98.4 1.6E-06 5.6E-11 78.0 9.9 106 319-441 16-126 (154)
63 1qmv_A Human thioredoxin perox 98.3 8.6E-07 2.9E-11 84.7 8.3 100 325-440 25-140 (197)
64 1uul_A Tryparedoxin peroxidase 98.3 2.1E-06 7.1E-11 82.5 11.0 100 325-440 27-142 (202)
65 2c0d_A Thioredoxin peroxidase 98.3 1.5E-06 5.1E-11 86.1 10.1 103 323-441 42-162 (221)
66 2i81_A 2-Cys peroxiredoxin; st 98.3 1.5E-06 5.2E-11 85.1 10.0 102 323-440 38-157 (213)
67 1kng_A Thiol:disulfide interch 98.3 1.8E-06 6.1E-11 77.6 9.2 98 325-440 33-133 (156)
68 3idv_A Protein disulfide-isome 98.3 4.4E-06 1.5E-10 80.7 12.2 149 332-531 30-192 (241)
69 2pn8_A Peroxiredoxin-4; thiore 98.3 2.2E-06 7.5E-11 83.9 9.8 103 323-441 37-155 (211)
70 2p31_A CL683, glutathione pero 98.3 3.8E-06 1.3E-10 79.2 11.1 114 319-440 34-162 (181)
71 2f8a_A Glutathione peroxidase 98.3 3.5E-06 1.2E-10 82.4 10.9 115 322-440 34-188 (208)
72 2ls5_A Uncharacterized protein 97.6 1E-07 3.6E-12 86.8 0.0 104 322-440 21-130 (159)
73 2ywi_A Hypothetical conserved 98.3 6.5E-07 2.2E-11 84.2 5.3 108 321-440 32-146 (196)
74 2b1k_A Thiol:disulfide interch 98.2 4.5E-06 1.5E-10 76.6 9.4 99 323-440 39-141 (168)
75 1n8j_A AHPC, alkyl hydroperoxi 98.2 5.3E-06 1.8E-10 79.1 10.1 101 325-441 21-134 (186)
76 1psq_A Probable thiol peroxida 98.2 8.7E-06 3E-10 75.3 11.1 105 318-441 26-142 (163)
77 2jsy_A Probable thiol peroxida 98.2 1E-06 3.5E-11 81.1 4.5 105 318-441 28-144 (167)
78 3p7x_A Probable thiol peroxida 98.2 6.9E-06 2.3E-10 76.2 10.0 105 317-440 29-144 (166)
79 2hyx_A Protein DIPZ; thioredox 98.2 2.1E-06 7.3E-11 91.4 7.3 109 321-440 69-180 (352)
80 2i3y_A Epididymal secretory gl 98.2 1.3E-05 4.4E-10 79.5 12.4 118 320-440 41-192 (215)
81 1xvq_A Thiol peroxidase; thior 98.1 2.8E-06 9.5E-11 79.8 6.9 104 318-441 28-145 (175)
82 4g2e_A Peroxiredoxin; redox pr 98.1 5E-06 1.7E-10 77.2 8.5 105 319-440 15-134 (157)
83 3tjj_A Peroxiredoxin-4; thiore 98.1 7.1E-06 2.4E-10 83.3 10.1 103 322-440 79-197 (254)
84 2r37_A Glutathione peroxidase 98.1 1.9E-05 6.5E-10 77.6 12.5 117 321-440 24-174 (207)
85 2a4v_A Peroxiredoxin DOT5; yea 98.1 1E-05 3.5E-10 74.2 9.8 105 318-441 17-133 (159)
86 1q98_A Thiol peroxidase, TPX; 98.1 1E-05 3.6E-10 75.0 9.7 106 318-441 27-146 (165)
87 3zrd_A Thiol peroxidase; oxido 98.1 9.9E-06 3.4E-10 78.6 9.5 107 317-441 61-181 (200)
88 2yzh_A Probable thiol peroxida 98.1 1.1E-05 3.7E-10 75.1 9.0 103 319-441 32-149 (171)
89 1nm3_A Protein HI0572; hybrid, 98.0 9.7E-05 3.3E-09 72.7 14.0 169 323-535 19-210 (241)
90 4gqc_A Thiol peroxidase, perox 98.0 7.2E-06 2.5E-10 77.0 5.7 107 317-440 14-136 (164)
91 3hxs_A Thioredoxin, TRXP; elec 97.9 4.7E-05 1.6E-09 67.9 8.9 78 323-439 40-120 (141)
92 1tp9_A Peroxiredoxin, PRX D (t 97.8 7.6E-05 2.6E-09 69.3 10.1 103 321-441 19-143 (162)
93 3a2v_A Probable peroxiredoxin; 97.8 2E-05 7E-10 80.2 5.7 102 322-440 19-139 (249)
94 2v2g_A Peroxiredoxin 6; oxidor 97.8 6.8E-05 2.3E-09 75.3 9.4 106 319-441 14-143 (233)
95 1prx_A HORF6; peroxiredoxin, h 97.8 0.00013 4.3E-09 72.4 11.2 105 319-440 16-146 (224)
96 1xcc_A 1-Cys peroxiredoxin; un 97.8 7.3E-05 2.5E-09 73.9 9.2 102 323-441 20-144 (220)
97 1z6n_A Hypothetical protein PA 97.7 6E-05 2E-09 72.0 6.8 75 328-439 48-125 (167)
98 2ju5_A Thioredoxin disulfide i 97.6 3E-05 1E-09 71.5 4.0 89 324-440 37-132 (154)
99 2l57_A Uncharacterized protein 97.6 0.00011 3.6E-09 64.5 7.3 74 329-439 21-97 (126)
100 3ul3_B Thioredoxin, thioredoxi 97.6 0.00018 6.2E-09 63.6 8.8 82 318-439 26-110 (128)
101 2wfc_A Peroxiredoxin 5, PRDX5; 97.6 0.00021 7.1E-09 67.5 9.4 102 321-440 17-138 (167)
102 2fwh_A Thiol:disulfide interch 97.5 0.00014 4.9E-09 65.0 6.7 77 326-438 23-105 (134)
103 3f9u_A Putative exported cytoc 97.5 3.8E-05 1.3E-09 71.2 2.6 97 331-440 44-146 (172)
104 3sbc_A Peroxiredoxin TSA1; alp 97.3 0.00032 1.1E-08 70.4 7.6 108 321-439 39-157 (216)
105 3tue_A Tryparedoxin peroxidase 97.3 0.00059 2E-08 68.6 9.2 108 321-439 43-161 (219)
106 3fk8_A Disulphide isomerase; A 97.3 0.00012 4.1E-09 64.8 3.3 73 332-440 27-107 (133)
107 2l5l_A Thioredoxin; structural 97.2 0.0007 2.4E-08 60.6 7.9 67 333-438 37-106 (136)
108 2voc_A Thioredoxin; electron t 97.1 0.00085 2.9E-08 57.8 6.8 67 333-439 16-85 (112)
109 3uma_A Hypothetical peroxiredo 97.1 0.0019 6.5E-08 62.3 9.4 118 323-465 43-181 (184)
110 3mng_A Peroxiredoxin-5, mitoch 97.1 0.0029 9.9E-08 60.4 10.6 103 321-441 29-153 (173)
111 3cxg_A Putative thioredoxin; m 97.0 0.00055 1.9E-08 61.5 5.1 72 329-439 35-110 (133)
112 1nsw_A Thioredoxin, TRX; therm 97.0 0.0013 4.4E-08 55.1 7.0 67 333-439 16-85 (105)
113 2kuc_A Putative disulphide-iso 97.0 0.0006 2E-08 59.7 5.1 76 327-439 20-101 (130)
114 3die_A Thioredoxin, TRX; elect 97.0 0.0017 5.7E-08 54.2 7.5 67 333-439 18-87 (106)
115 1x5d_A Protein disulfide-isome 97.0 0.0014 4.6E-08 57.4 7.2 70 333-438 24-96 (133)
116 1thx_A Thioredoxin, thioredoxi 97.0 0.002 6.9E-08 54.5 7.8 67 333-439 24-93 (115)
117 3d6i_A Monothiol glutaredoxin- 97.0 0.0017 5.7E-08 55.4 7.1 67 334-439 21-90 (112)
118 2trx_A Thioredoxin; electron t 96.9 0.0015 5.1E-08 55.0 6.7 67 333-439 19-88 (108)
119 2yzu_A Thioredoxin; redox prot 96.9 0.0024 8.2E-08 53.2 7.6 67 333-439 17-86 (109)
120 1dby_A Chloroplast thioredoxin 96.9 0.0028 9.4E-08 53.3 7.8 66 334-439 19-87 (107)
121 2i4a_A Thioredoxin; acidophIle 96.9 0.0023 7.7E-08 53.5 7.1 67 333-439 19-88 (107)
122 1xwb_A Thioredoxin; dimerizati 96.9 0.0022 7.6E-08 53.5 6.9 68 332-439 18-88 (106)
123 1t00_A Thioredoxin, TRX; redox 96.9 0.0023 8E-08 54.3 7.2 67 333-439 22-91 (112)
124 3qou_A Protein YBBN; thioredox 96.8 0.002 6.8E-08 64.4 7.6 67 333-439 25-94 (287)
125 1sen_A Thioredoxin-like protei 96.8 0.00038 1.3E-08 65.2 1.9 101 327-469 39-144 (164)
126 1w4v_A Thioredoxin, mitochondr 96.8 0.0028 9.5E-08 55.2 7.3 67 333-439 30-99 (119)
127 2pwj_A Mitochondrial peroxired 96.8 0.0042 1.4E-07 58.5 9.0 100 325-441 33-151 (171)
128 2lst_A Thioredoxin; structural 95.8 0.00021 7.2E-09 62.8 0.0 75 326-437 11-92 (130)
129 2e0q_A Thioredoxin; electron t 96.8 0.0035 1.2E-07 51.6 7.4 66 333-439 15-83 (104)
130 2l6c_A Thioredoxin; oxidoreduc 96.8 0.0051 1.7E-07 52.9 8.7 68 333-439 18-86 (110)
131 3gnj_A Thioredoxin domain prot 96.8 0.0031 1.1E-07 53.1 7.2 66 333-438 21-89 (111)
132 1x5e_A Thioredoxin domain cont 96.8 0.0021 7.3E-08 56.1 6.3 67 332-438 21-90 (126)
133 3tco_A Thioredoxin (TRXA-1); d 96.8 0.0036 1.2E-07 52.3 7.5 67 333-439 20-89 (109)
134 3uvt_A Thioredoxin domain-cont 96.7 0.002 7E-08 54.1 5.9 71 332-439 19-92 (111)
135 3keb_A Probable thiol peroxida 96.7 0.0071 2.4E-07 60.9 10.7 104 320-441 34-153 (224)
136 2dj1_A Protein disulfide-isome 96.7 0.0031 1E-07 55.8 7.2 69 333-438 33-104 (140)
137 3qfa_C Thioredoxin; protein-pr 96.7 0.0036 1.2E-07 54.5 7.3 66 333-439 30-98 (116)
138 1gh2_A Thioredoxin-like protei 96.7 0.0035 1.2E-07 53.0 7.1 66 333-439 20-88 (107)
139 2oe3_A Thioredoxin-3; electron 96.7 0.0038 1.3E-07 54.4 7.4 66 333-439 29-97 (114)
140 1a8l_A Protein disulfide oxido 96.7 0.031 1E-06 53.5 14.3 151 332-530 20-179 (226)
141 3zzx_A Thioredoxin; oxidoreduc 96.7 0.0031 1.1E-07 55.2 6.7 69 333-440 19-88 (105)
142 4euy_A Uncharacterized protein 96.7 0.0029 9.8E-08 53.7 6.2 66 333-439 17-85 (105)
143 1xfl_A Thioredoxin H1; AT3G510 96.6 0.0043 1.5E-07 54.8 7.6 66 333-439 37-105 (124)
144 1zma_A Bacterocin transport ac 96.6 0.0041 1.4E-07 53.8 7.2 70 334-439 29-101 (118)
145 2f51_A Thioredoxin; electron t 96.6 0.0026 8.9E-08 55.7 5.9 65 334-438 23-93 (118)
146 2dml_A Protein disulfide-isome 96.6 0.0057 2E-07 53.4 8.1 64 334-436 35-101 (130)
147 2o8v_B Thioredoxin 1; disulfid 96.6 0.0019 6.6E-08 57.6 5.1 67 333-439 39-108 (128)
148 1fb6_A Thioredoxin M; electron 96.6 0.0051 1.7E-07 51.2 7.2 66 334-439 18-86 (105)
149 3f3q_A Thioredoxin-1; His TAG, 96.6 0.0044 1.5E-07 53.2 7.0 66 333-439 23-91 (109)
150 1ep7_A Thioredoxin CH1, H-type 96.6 0.0044 1.5E-07 52.4 6.8 66 334-439 24-92 (112)
151 2wz9_A Glutaredoxin-3; protein 96.6 0.0043 1.5E-07 56.7 7.2 66 333-439 31-99 (153)
152 2pu9_C TRX-F, thioredoxin F-ty 96.5 0.0042 1.4E-07 52.9 6.2 68 332-439 22-92 (111)
153 3aps_A DNAJ homolog subfamily 96.5 0.0043 1.5E-07 53.6 6.2 66 334-438 21-89 (122)
154 3apo_A DNAJ homolog subfamily 96.5 0.028 9.6E-07 64.3 14.7 144 330-530 451-604 (780)
155 2dj0_A Thioredoxin-related tra 96.5 0.0059 2E-07 54.4 7.2 68 333-439 25-101 (137)
156 1mek_A Protein disulfide isome 96.4 0.0026 8.9E-08 53.9 4.7 69 333-438 23-94 (120)
157 3d22_A TRXH4, thioredoxin H-ty 96.4 0.0047 1.6E-07 54.8 6.5 67 332-439 44-113 (139)
158 3m9j_A Thioredoxin; oxidoreduc 96.4 0.0046 1.6E-07 51.6 6.1 66 333-439 19-87 (105)
159 4eo3_A Bacterioferritin comigr 96.4 0.0075 2.6E-07 63.2 9.0 105 317-439 7-116 (322)
160 2i1u_A Thioredoxin, TRX, MPT46 96.4 0.0068 2.3E-07 52.0 7.2 67 333-439 29-98 (121)
161 2vlu_A Thioredoxin, thioredoxi 96.4 0.0069 2.4E-07 52.3 7.0 66 333-439 33-101 (122)
162 1qgv_A Spliceosomal protein U5 96.3 0.0033 1.1E-07 57.4 5.0 68 333-440 22-92 (142)
163 3hz4_A Thioredoxin; NYSGXRC, P 96.3 0.0065 2.2E-07 54.6 6.8 66 334-439 24-92 (140)
164 1syr_A Thioredoxin; SGPP, stru 96.3 0.0095 3.3E-07 51.0 7.5 66 333-439 25-93 (112)
165 2ppt_A Thioredoxin-2; thiredox 96.3 0.0064 2.2E-07 56.3 6.9 67 333-439 63-132 (155)
166 3gix_A Thioredoxin-like protei 96.3 0.0043 1.5E-07 57.1 5.7 65 334-438 23-90 (149)
167 1r26_A Thioredoxin; redox-acti 96.3 0.008 2.7E-07 53.5 7.0 66 333-439 36-104 (125)
168 2j23_A Thioredoxin; immune pro 96.3 0.0056 1.9E-07 53.5 5.9 69 333-440 32-103 (121)
169 2vm1_A Thioredoxin, thioredoxi 96.2 0.01 3.5E-07 50.5 7.0 66 333-439 27-95 (118)
170 2dj3_A Protein disulfide-isome 96.2 0.0042 1.4E-07 54.5 4.6 68 333-437 24-94 (133)
171 1ti3_A Thioredoxin H, PTTRXH1; 96.2 0.01 3.4E-07 50.1 6.8 66 333-439 25-93 (113)
172 3p2a_A Thioredoxin 2, putative 96.2 0.01 3.4E-07 53.5 7.1 68 332-439 53-123 (148)
173 3ph9_A Anterior gradient prote 96.1 0.0011 3.7E-08 62.5 0.7 45 419-467 95-139 (151)
174 1oaz_A Thioredoxin 1; immune s 96.1 0.0031 1.1E-07 55.9 3.4 67 333-439 20-103 (123)
175 2xc2_A Thioredoxinn; oxidoredu 96.1 0.0071 2.4E-07 52.0 5.5 67 332-439 31-99 (117)
176 3q6o_A Sulfhydryl oxidase 1; p 96.1 0.013 4.6E-07 57.4 8.0 69 334-436 30-101 (244)
177 2vim_A Thioredoxin, TRX; thior 96.0 0.015 5E-07 48.2 7.1 66 333-439 18-86 (104)
178 3h79_A Thioredoxin-like protei 96.0 0.013 4.5E-07 51.3 6.9 70 333-437 32-105 (127)
179 3emx_A Thioredoxin; structural 96.0 0.0091 3.1E-07 53.4 5.9 74 332-439 30-106 (135)
180 1faa_A Thioredoxin F; electron 96.0 0.012 4.2E-07 51.0 6.6 67 333-439 36-105 (124)
181 3apq_A DNAJ homolog subfamily 95.9 0.014 4.9E-07 56.0 7.5 68 332-439 112-182 (210)
182 1v98_A Thioredoxin; oxidoreduc 95.9 0.02 6.8E-07 51.0 7.8 66 334-439 50-118 (140)
183 3idv_A Protein disulfide-isome 95.8 0.025 8.4E-07 54.3 8.6 70 333-439 146-218 (241)
184 3uem_A Protein disulfide-isome 95.8 0.069 2.3E-06 55.1 12.5 150 334-529 135-309 (361)
185 1a8l_A Protein disulfide oxido 95.7 0.031 1.1E-06 53.4 8.9 69 334-438 134-205 (226)
186 1wou_A Thioredoxin -related pr 95.5 0.021 7.3E-07 50.2 6.1 75 333-439 23-107 (123)
187 3dxb_A Thioredoxin N-terminall 95.4 0.014 4.8E-07 56.8 5.3 67 333-439 29-98 (222)
188 3ira_A Conserved protein; meth 95.4 0.017 5.7E-07 55.8 5.5 81 329-440 34-120 (173)
189 2dbc_A PDCL2, unnamed protein 95.2 0.032 1.1E-06 50.1 6.6 63 334-440 30-95 (135)
190 3t58_A Sulfhydryl oxidase 1; o 95.1 0.045 1.5E-06 61.0 8.5 69 334-436 30-104 (519)
191 3ed3_A Protein disulfide-isome 94.8 0.15 5.3E-06 52.2 11.0 153 334-530 35-198 (298)
192 2djj_A PDI, protein disulfide- 94.7 0.051 1.7E-06 46.5 6.1 67 333-437 24-94 (121)
193 2yj7_A LPBCA thioredoxin; oxid 93.7 0.0057 2E-07 50.5 0.0 67 333-439 18-87 (106)
194 4f82_A Thioredoxin reductase; 94.6 0.04 1.4E-06 53.5 5.9 100 323-441 35-155 (176)
195 2es7_A Q8ZP25_salty, putative 94.6 0.05 1.7E-06 50.2 6.1 65 334-439 34-105 (142)
196 1fo5_A Thioredoxin; disulfide 94.5 0.035 1.2E-06 44.4 4.3 61 335-437 3-66 (85)
197 1wmj_A Thioredoxin H-type; str 94.4 0.0096 3.3E-07 51.7 0.9 66 333-439 35-103 (130)
198 2dlx_A UBX domain-containing p 94.4 0.11 3.8E-06 49.0 8.1 70 334-440 42-118 (153)
199 1nho_A Probable thioredoxin; b 94.2 0.04 1.4E-06 44.1 4.1 59 337-437 4-65 (85)
200 2qsi_A Putative hydrogenase ex 94.1 0.15 5E-06 47.8 8.3 68 335-440 34-104 (137)
201 3apo_A DNAJ homolog subfamily 94.0 0.38 1.3E-05 55.1 13.2 147 334-531 563-717 (780)
202 2qgv_A Hydrogenase-1 operon pr 93.7 0.14 4.9E-06 48.0 7.4 70 333-440 33-106 (140)
203 2ywm_A Glutaredoxin-like prote 93.5 0.85 2.9E-05 43.6 12.7 41 489-530 135-176 (229)
204 2hls_A Protein disulfide oxido 92.9 0.26 8.8E-06 49.0 8.3 70 331-438 135-207 (243)
205 1a0r_P Phosducin, MEKA, PP33; 92.3 0.1 3.5E-06 52.9 4.5 89 333-467 132-223 (245)
206 2trc_P Phosducin, MEKA, PP33; 91.9 0.19 6.4E-06 49.6 5.7 90 333-466 119-209 (217)
207 3f8u_A Protein disulfide-isome 91.8 0.14 4.8E-06 55.0 5.1 65 334-436 370-437 (481)
208 3iv4_A Putative oxidoreductase 90.7 0.89 3.1E-05 41.3 8.5 69 334-440 24-96 (112)
209 2ywm_A Glutaredoxin-like prote 90.3 0.73 2.5E-05 44.1 8.1 61 334-437 136-199 (229)
210 1ilo_A Conserved hypothetical 90.1 0.71 2.4E-05 36.2 6.6 58 338-440 3-63 (77)
211 3qcp_A QSOX from trypanosoma b 89.8 0.36 1.2E-05 53.5 6.1 68 334-436 42-116 (470)
212 1v5n_A PDI-like hypothetical p 89.8 0.063 2.2E-06 46.8 0.1 18 450-467 1-18 (89)
213 1o8x_A Tryparedoxin, TRYX, TXN 89.6 0.47 1.6E-05 42.0 5.7 57 480-540 20-81 (146)
214 3f8u_A Protein disulfide-isome 89.5 1.8 6.2E-05 46.3 11.2 65 334-438 21-88 (481)
215 1o73_A Tryparedoxin; electron 89.3 0.57 2E-05 41.0 5.9 59 480-540 20-81 (144)
216 2e7p_A Glutaredoxin; thioredox 89.0 0.66 2.3E-05 39.6 6.0 24 413-439 62-85 (116)
217 3us3_A Calsequestrin-1; calciu 88.7 2.3 7.8E-05 44.6 11.0 71 333-438 29-104 (367)
218 2r2j_A Thioredoxin domain-cont 88.3 0.56 1.9E-05 49.2 6.1 73 333-439 21-96 (382)
219 3uem_A Protein disulfide-isome 87.9 0.33 1.1E-05 49.9 3.9 39 333-373 266-307 (361)
220 1i5g_A Tryparedoxin II; electr 87.8 0.75 2.6E-05 40.4 5.7 50 489-540 27-81 (144)
221 3s9f_A Tryparedoxin; thioredox 87.6 0.68 2.3E-05 42.6 5.5 58 482-541 42-102 (165)
222 3kp8_A Vkorc1/thioredoxin doma 86.7 0.048 1.6E-06 47.7 -2.8 26 326-351 4-29 (106)
223 3dml_A Putative uncharacterize 86.5 0.063 2.2E-06 48.8 -2.1 71 333-439 17-90 (116)
224 2b5e_A Protein disulfide-isome 85.6 1.7 5.7E-05 47.0 8.0 65 333-436 30-97 (504)
225 3tco_A Thioredoxin (TRXA-1); d 84.5 2.2 7.5E-05 35.0 6.6 51 483-533 14-65 (109)
226 3q6o_A Sulfhydryl oxidase 1; p 84.4 0.44 1.5E-05 46.5 2.6 44 394-441 179-222 (244)
227 4fo5_A Thioredoxin-like protei 84.3 1.2 4E-05 39.3 5.0 50 489-540 31-84 (143)
228 1sji_A Calsequestrin 2, calseq 83.7 2.3 7.9E-05 43.8 7.8 71 333-438 27-102 (350)
229 1v58_A Thiol:disulfide interch 83.3 9.6 0.00033 37.6 11.8 98 333-437 96-212 (241)
230 3evi_A Phosducin-like protein 82.4 1.7 5.7E-05 38.8 5.3 87 334-466 23-110 (118)
231 3fkf_A Thiol-disulfide oxidore 82.4 2.5 8.5E-05 36.6 6.4 50 489-540 32-86 (148)
232 2lrn_A Thiol:disulfide interch 81.1 2.3 7.9E-05 37.7 5.8 55 482-540 23-81 (152)
233 2av4_A Thioredoxin-like protei 80.7 1.2 4.2E-05 42.8 4.0 65 334-438 41-108 (160)
234 1t3b_A Thiol:disulfide interch 80.2 9 0.00031 36.9 10.1 94 334-438 86-193 (211)
235 2yzu_A Thioredoxin; redox prot 80.2 3.4 0.00012 33.8 6.1 46 486-531 14-60 (109)
236 3die_A Thioredoxin, TRX; elect 80.1 4 0.00014 33.3 6.6 45 489-533 18-63 (106)
237 3gl3_A Putative thiol:disulfid 80.1 2.4 8.1E-05 37.2 5.5 52 489-540 27-80 (152)
238 3hcz_A Possible thiol-disulfid 80.1 1.9 6.3E-05 37.4 4.7 51 489-541 30-84 (148)
239 3eur_A Uncharacterized protein 79.2 3 0.0001 36.5 5.8 51 489-541 30-87 (142)
240 3ga4_A Dolichyl-diphosphooligo 78.8 7.1 0.00024 37.8 8.8 69 334-437 37-116 (178)
241 1zzo_A RV1677; thioredoxin fol 78.5 2.6 8.9E-05 35.7 5.1 51 489-540 24-75 (136)
242 1nsw_A Thioredoxin, TRX; therm 78.3 4.1 0.00014 33.4 6.1 47 486-532 13-60 (105)
243 3or5_A Thiol:disulfide interch 78.2 3.6 0.00012 36.4 6.1 52 489-540 33-86 (165)
244 3lor_A Thiol-disulfide isomera 77.6 3.5 0.00012 36.5 5.8 60 477-540 19-89 (160)
245 2k8s_A Thioredoxin; dimer, str 77.4 2.4 8.2E-05 34.1 4.3 18 418-438 49-66 (80)
246 4evm_A Thioredoxin family prot 77.4 3.9 0.00013 34.3 5.8 39 489-527 21-60 (138)
247 2lrt_A Uncharacterized protein 77.4 2.6 8.8E-05 37.8 4.9 54 482-539 29-86 (152)
248 2i4a_A Thioredoxin; acidophIle 77.2 5.4 0.00018 32.6 6.5 44 488-531 18-62 (107)
249 1eej_A Thiol:disulfide interch 77.1 8.6 0.0003 37.1 8.9 92 333-437 85-192 (216)
250 3ewl_A Uncharacterized conserv 76.7 2.6 9E-05 36.6 4.7 57 482-540 21-82 (142)
251 2b5e_A Protein disulfide-isome 76.5 3.1 0.0001 45.0 6.1 66 333-437 375-443 (504)
252 2trx_A Thioredoxin; electron t 75.5 6.2 0.00021 32.5 6.5 45 487-531 17-62 (108)
253 3ha9_A Uncharacterized thiored 75.5 4.1 0.00014 36.4 5.8 44 482-530 31-77 (165)
254 1syr_A Thioredoxin; SGPP, stru 75.4 5.7 0.0002 33.4 6.3 47 484-531 20-67 (112)
255 1dby_A Chloroplast thioredoxin 75.3 5.5 0.00019 32.7 6.1 45 488-532 17-62 (107)
256 1t00_A Thioredoxin, TRX; redox 75.2 5.6 0.00019 33.1 6.1 46 487-532 20-66 (112)
257 1thx_A Thioredoxin, thioredoxi 75.0 4.9 0.00017 33.3 5.7 46 487-532 22-68 (115)
258 3f3q_A Thioredoxin-1; His TAG, 74.7 6.6 0.00023 33.1 6.5 49 482-531 16-65 (109)
259 2e0q_A Thioredoxin; electron t 74.6 6.9 0.00024 31.4 6.4 46 486-532 12-58 (104)
260 1lu4_A Soluble secreted antige 74.5 3.8 0.00013 34.8 5.1 51 489-540 23-74 (136)
261 2i1u_A Thioredoxin, TRX, MPT46 74.1 6 0.00021 33.3 6.1 45 487-531 27-72 (121)
262 1xwb_A Thioredoxin; dimerizati 74.0 8.2 0.00028 31.4 6.8 44 489-532 19-63 (106)
263 3ul3_B Thioredoxin, thioredoxi 73.9 6.1 0.00021 34.2 6.3 46 487-532 39-85 (128)
264 2f9s_A Thiol-disulfide oxidore 73.9 7.5 0.00026 34.1 6.9 57 482-540 20-78 (151)
265 1w4v_A Thioredoxin, mitochondr 73.9 6.1 0.00021 33.8 6.2 46 487-532 28-74 (119)
266 3raz_A Thioredoxin-related pro 73.1 3.9 0.00013 36.2 4.9 54 477-532 13-68 (151)
267 1fb6_A Thioredoxin M; electron 73.1 6.9 0.00024 31.8 6.1 45 488-532 16-61 (105)
268 2xhf_A Peroxiredoxin 5; oxidor 72.9 13 0.00045 35.4 8.8 98 325-441 32-149 (171)
269 3gyk_A 27KDA outer membrane pr 72.7 6.3 0.00022 35.9 6.4 38 332-374 20-60 (175)
270 3fw2_A Thiol-disulfide oxidore 72.5 6.7 0.00023 34.6 6.3 52 489-540 32-88 (150)
271 3erw_A Sporulation thiol-disul 72.4 8.3 0.00028 33.0 6.7 43 489-531 33-77 (145)
272 3p2a_A Thioredoxin 2, putative 72.2 7.6 0.00026 34.4 6.6 51 483-533 48-99 (148)
273 3gnj_A Thioredoxin domain prot 71.9 8.1 0.00028 31.8 6.3 48 485-532 16-65 (111)
274 2djk_A PDI, protein disulfide- 71.0 4.8 0.00016 35.7 4.9 67 334-438 23-93 (133)
275 1zma_A Bacterocin transport ac 70.4 11 0.00037 32.0 6.9 45 484-530 23-68 (118)
276 3kij_A Probable glutathione pe 70.3 6.4 0.00022 36.2 5.8 55 482-540 32-97 (180)
277 2l5l_A Thioredoxin; structural 69.4 8 0.00027 33.9 6.0 44 488-531 36-80 (136)
278 2l57_A Uncharacterized protein 69.2 7.1 0.00024 33.4 5.6 44 487-530 23-69 (126)
279 3hz4_A Thioredoxin; NYSGXRC, P 69.2 8 0.00027 34.1 6.0 47 486-532 20-67 (140)
280 1ttz_A Conserved hypothetical 68.9 17 0.00058 30.6 7.7 32 417-465 41-72 (87)
281 4euy_A Uncharacterized protein 68.8 3.5 0.00012 34.3 3.4 45 486-531 14-59 (105)
282 2hls_A Protein disulfide oxido 68.7 72 0.0025 31.2 13.4 30 489-518 137-167 (243)
283 2voc_A Thioredoxin; electron t 68.7 4.6 0.00016 34.0 4.2 46 485-531 13-59 (112)
284 2p5q_A Glutathione peroxidase 68.6 7.1 0.00024 34.8 5.6 45 482-530 26-74 (170)
285 3kcm_A Thioredoxin family prot 68.2 15 0.00051 32.1 7.6 51 489-539 27-80 (154)
286 2vim_A Thioredoxin, TRX; thior 68.1 11 0.00037 30.6 6.2 42 489-531 18-60 (104)
287 2lja_A Putative thiol-disulfid 68.0 5 0.00017 35.1 4.4 51 489-539 29-81 (152)
288 2b5x_A YKUV protein, TRXY; thi 67.9 7.9 0.00027 33.2 5.6 43 489-531 28-71 (148)
289 3aps_A DNAJ homolog subfamily 67.7 10 0.00034 32.1 6.1 46 487-532 18-64 (122)
290 3hxs_A Thioredoxin, TRXP; elec 67.6 5.7 0.0002 34.6 4.7 44 489-532 50-94 (141)
291 3eyt_A Uncharacterized protein 67.5 7.7 0.00026 34.2 5.6 55 482-540 22-87 (158)
292 2lus_A Thioredoxion; CR-Trp16, 70.7 1.1 3.8E-05 38.8 0.0 48 489-538 24-78 (143)
293 1ti3_A Thioredoxin H, PTTRXH1; 67.3 13 0.00044 30.6 6.6 43 489-532 25-68 (113)
294 3fk8_A Disulphide isomerase; A 67.2 4.2 0.00014 35.2 3.7 43 487-529 26-71 (133)
295 1ep7_A Thioredoxin CH1, H-type 67.2 8.7 0.0003 31.8 5.5 43 490-532 24-67 (112)
296 3m9j_A Thioredoxin; oxidoreduc 66.4 12 0.0004 30.5 6.1 43 489-532 19-62 (105)
297 2oe3_A Thioredoxin-3; electron 66.3 9.5 0.00033 32.6 5.7 46 485-531 25-71 (114)
298 3kh7_A Thiol:disulfide interch 66.2 5.1 0.00017 37.0 4.2 48 489-541 57-107 (176)
299 3lwa_A Secreted thiol-disulfid 66.1 6.3 0.00022 36.1 4.8 56 482-541 53-119 (183)
300 2b1k_A Thiol:disulfide interch 66.0 7.9 0.00027 34.7 5.4 50 488-540 49-99 (168)
301 2o8v_B Thioredoxin 1; disulfid 65.9 7.2 0.00024 34.2 5.0 45 487-531 37-82 (128)
302 3cmi_A Peroxiredoxin HYR1; thi 65.6 5.3 0.00018 36.3 4.2 64 447-530 6-73 (171)
303 2dj1_A Protein disulfide-isome 65.1 11 0.00036 32.7 5.9 49 483-531 27-79 (140)
304 2hze_A Glutaredoxin-1; thiored 64.6 5.8 0.0002 34.4 4.1 25 411-438 62-86 (114)
305 2p31_A CL683, glutathione pero 64.0 9.2 0.00031 35.3 5.6 45 482-530 43-91 (181)
306 1xiy_A Peroxiredoxin, pfaop; a 63.9 22 0.00077 34.0 8.4 98 325-441 33-151 (182)
307 2vup_A Glutathione peroxidase- 63.1 8.3 0.00028 35.9 5.1 45 482-530 42-90 (190)
308 1x5d_A Protein disulfide-isome 63.0 11 0.00036 32.3 5.4 44 488-531 23-71 (133)
309 2vlu_A Thioredoxin, thioredoxi 62.8 12 0.00041 31.6 5.7 42 489-531 33-75 (122)
310 1xfl_A Thioredoxin H1; AT3G510 62.5 16 0.00055 31.6 6.6 43 489-532 37-80 (124)
311 1jfu_A Thiol:disulfide interch 61.7 11 0.00038 34.4 5.6 55 483-539 55-112 (186)
312 3qfa_C Thioredoxin; protein-pr 61.5 13 0.00043 31.8 5.6 47 485-532 24-73 (116)
313 3t58_A Sulfhydryl oxidase 1; o 60.9 5.9 0.0002 44.1 4.2 64 388-456 173-240 (519)
314 2j23_A Thioredoxin; immune pro 60.5 7.2 0.00025 33.5 3.9 49 484-532 27-77 (121)
315 1z6n_A Hypothetical protein PA 60.2 7 0.00024 36.8 4.0 47 489-538 53-102 (167)
316 1hyu_A AHPF, alkyl hydroperoxi 60.1 12 0.00041 40.9 6.5 67 332-440 115-183 (521)
317 2ggt_A SCO1 protein homolog, m 60.1 9.5 0.00032 33.7 4.7 45 483-531 18-71 (164)
318 2f51_A Thioredoxin; electron t 59.7 14 0.00049 31.5 5.7 43 488-531 21-64 (118)
319 1kng_A Thiol:disulfide interch 59.2 12 0.00041 32.7 5.1 50 489-540 41-91 (156)
320 2ppt_A Thioredoxin-2; thiredox 58.8 11 0.00036 34.4 4.9 49 483-531 57-106 (155)
321 2vm1_A Thioredoxin, thioredoxi 58.6 14 0.00047 30.7 5.3 42 489-531 27-69 (118)
322 1gh2_A Thioredoxin-like protei 57.6 18 0.00061 29.8 5.7 43 488-531 19-62 (107)
323 2qc7_A ERP31, ERP28, endoplasm 57.4 7.9 0.00027 38.9 4.1 21 415-436 72-94 (240)
324 2dml_A Protein disulfide-isome 56.2 8 0.00027 33.1 3.4 43 488-532 33-78 (130)
325 3dwv_A Glutathione peroxidase- 56.1 7 0.00024 36.4 3.2 46 481-530 39-88 (187)
326 3gix_A Thioredoxin-like protei 55.7 11 0.00038 34.1 4.5 44 488-531 21-65 (149)
327 1kte_A Thioltransferase; redox 55.1 18 0.0006 30.2 5.3 26 411-439 55-80 (105)
328 3d6i_A Monothiol glutaredoxin- 55.0 14 0.00049 30.6 4.7 43 489-531 20-64 (112)
329 2l5o_A Putative thioredoxin; s 54.9 19 0.00066 31.3 5.8 53 482-538 22-79 (153)
330 2obi_A PHGPX, GPX-4, phospholi 54.9 17 0.00057 33.4 5.6 45 482-530 41-89 (183)
331 2v1m_A Glutathione peroxidase; 53.9 17 0.00058 32.2 5.3 46 481-530 24-73 (169)
332 1qgv_A Spliceosomal protein U5 53.9 10 0.00036 34.0 3.9 42 489-530 22-64 (142)
333 2rli_A SCO2 protein homolog, m 53.0 16 0.00054 32.6 5.0 45 483-531 21-74 (171)
334 2ls5_A Uncharacterized protein 57.4 3 0.0001 37.1 0.0 48 489-538 32-85 (159)
335 3drn_A Peroxiredoxin, bacterio 51.8 17 0.00057 32.7 4.9 54 482-540 22-81 (161)
336 1r26_A Thioredoxin; redox-acti 51.8 24 0.00083 30.7 5.9 47 484-531 31-78 (125)
337 2ju5_A Thioredoxin disulfide i 50.9 9.9 0.00034 34.3 3.3 43 488-530 45-92 (154)
338 2c0g_A ERP29 homolog, windbeut 50.8 11 0.00037 38.1 3.8 67 333-437 32-106 (248)
339 3zzx_A Thioredoxin; oxidoreduc 50.7 22 0.00076 30.4 5.3 42 489-531 19-61 (105)
340 2djj_A PDI, protein disulfide- 49.9 12 0.00043 31.3 3.6 43 488-530 23-71 (121)
341 3hd5_A Thiol:disulfide interch 49.6 22 0.00074 33.1 5.5 40 333-375 24-65 (195)
342 2xc2_A Thioredoxinn; oxidoredu 49.4 22 0.00074 29.9 5.0 41 489-531 32-73 (117)
343 2cvb_A Probable thiol-disulfid 48.9 16 0.00055 33.4 4.4 45 482-530 27-74 (188)
344 2l6c_A Thioredoxin; oxidoreduc 48.7 20 0.00069 30.1 4.7 43 487-530 16-59 (110)
345 3hdc_A Thioredoxin family prot 48.0 19 0.00066 31.9 4.7 41 489-531 40-84 (158)
346 3dxb_A Thioredoxin N-terminall 48.0 14 0.00046 35.5 3.9 46 487-532 27-73 (222)
347 3uvt_A Thioredoxin domain-cont 47.7 39 0.0013 27.5 6.2 47 485-532 17-67 (111)
348 3d22_A TRXH4, thioredoxin H-ty 47.3 31 0.0011 29.9 5.8 43 489-532 45-88 (139)
349 3gv1_A Disulfide interchange p 46.7 88 0.003 28.7 9.1 94 333-437 13-120 (147)
350 2k6v_A Putative cytochrome C o 46.1 16 0.00054 32.5 3.8 47 480-530 27-81 (172)
351 3u5r_E Uncharacterized protein 46.1 16 0.00055 35.0 4.1 45 482-530 52-101 (218)
352 1v98_A Thioredoxin; oxidoreduc 45.6 43 0.0015 29.1 6.6 43 489-532 50-93 (140)
353 2dj3_A Protein disulfide-isome 44.8 40 0.0014 28.7 6.1 42 489-530 24-68 (133)
354 3c1r_A Glutaredoxin-1; oxidize 44.6 17 0.00057 31.9 3.7 66 338-438 27-93 (118)
355 1wou_A Thioredoxin -related pr 44.1 35 0.0012 29.3 5.6 42 489-530 23-72 (123)
356 2pu9_C TRX-F, thioredoxin F-ty 44.1 42 0.0014 27.7 5.9 41 489-530 23-64 (111)
357 2jsy_A Probable thiol peroxida 43.8 20 0.00067 32.2 4.1 47 481-532 37-87 (167)
358 3ixr_A Bacterioferritin comigr 43.5 35 0.0012 31.5 5.9 47 482-532 45-96 (179)
359 2yj7_A LPBCA thioredoxin; oxid 49.4 5 0.00017 32.4 0.0 42 488-531 17-61 (106)
360 2bmx_A Alkyl hydroperoxidase C 43.1 32 0.0011 31.9 5.6 48 489-539 44-96 (195)
361 3ia1_A THIO-disulfide isomeras 42.6 21 0.00072 31.2 4.0 47 491-539 31-80 (154)
362 2fwh_A Thiol:disulfide interch 42.3 36 0.0012 29.6 5.5 42 489-531 30-75 (134)
363 2cq9_A GLRX2 protein, glutared 41.8 65 0.0022 28.5 7.2 25 412-439 68-92 (130)
364 3apq_A DNAJ homolog subfamily 41.6 38 0.0013 31.9 5.9 48 485-532 109-157 (210)
365 1xzo_A BSSCO, hypothetical pro 41.4 12 0.00041 33.5 2.3 55 482-540 27-91 (174)
366 2gs3_A PHGPX, GPX-4, phospholi 41.2 36 0.0012 31.3 5.6 45 482-530 43-91 (185)
367 2wz9_A Glutaredoxin-3; protein 41.1 43 0.0015 29.9 5.9 45 487-532 27-74 (153)
368 1k68_A Phytochrome response re 41.1 1.5E+02 0.0052 24.4 9.5 50 410-463 71-123 (140)
369 2h30_A Thioredoxin, peptide me 41.0 20 0.0007 31.5 3.7 42 489-530 37-80 (164)
370 2dlx_A UBX domain-containing p 40.9 22 0.00075 33.2 4.0 45 487-531 39-87 (153)
371 1xvw_A Hypothetical protein RV 40.6 27 0.00093 30.8 4.4 53 482-539 29-87 (160)
372 2ht9_A Glutaredoxin-2; thiored 39.7 28 0.00096 32.0 4.5 26 411-439 89-114 (146)
373 3h5i_A Response regulator/sens 39.6 1.3E+02 0.0046 25.4 8.7 79 367-462 29-115 (140)
374 2ywi_A Hypothetical conserved 39.4 28 0.00097 31.8 4.5 45 482-530 39-88 (196)
375 2dj0_A Thioredoxin-related tra 39.2 20 0.00068 31.3 3.3 41 489-531 25-69 (137)
376 3na7_A HP0958; flagellar bioge 39.0 9.1 0.00031 38.6 1.1 12 669-680 221-232 (256)
377 1faa_A Thioredoxin F; electron 38.9 56 0.0019 27.5 6.0 41 489-530 36-77 (124)
378 3h79_A Thioredoxin-like protei 38.8 44 0.0015 28.5 5.4 49 484-532 26-81 (127)
379 1ego_A Glutaredoxin; electron 38.2 15 0.00053 29.0 2.2 63 338-439 3-70 (85)
380 3msz_A Glutaredoxin 1; alpha-b 38.2 45 0.0015 26.4 5.0 33 338-375 6-38 (89)
381 2lst_A Thioredoxin; structural 44.2 6.8 0.00023 33.6 0.0 42 487-530 16-63 (130)
382 1mb3_A Cell division response 37.4 1.5E+02 0.0051 24.1 8.4 49 410-462 61-112 (124)
383 3ira_A Conserved protein; meth 37.1 22 0.00076 33.9 3.4 44 487-530 36-83 (173)
384 1sen_A Thioredoxin-like protei 36.7 9.6 0.00033 35.0 0.8 45 487-531 43-88 (164)
385 1mek_A Protein disulfide isome 36.6 12 0.00042 30.9 1.4 46 485-530 19-68 (120)
386 3me7_A Putative uncharacterize 36.2 28 0.00095 31.9 3.9 46 482-531 22-74 (170)
387 2rem_A Disulfide oxidoreductas 35.7 47 0.0016 30.4 5.4 40 332-375 23-65 (193)
388 2dbc_A PDCL2, unnamed protein 34.8 46 0.0016 29.2 4.9 41 489-530 29-70 (135)
389 2jrp_A Putative cytoplasmic pr 34.6 13 0.00046 32.0 1.3 24 665-688 26-54 (81)
390 1qmv_A Human thioredoxin perox 33.9 49 0.0017 30.7 5.2 54 482-540 28-86 (197)
391 3h93_A Thiol:disulfide interch 33.8 52 0.0018 30.3 5.4 40 333-375 24-65 (192)
392 1zof_A Alkyl hydroperoxide-red 33.1 27 0.00094 32.4 3.3 52 489-543 32-88 (198)
393 1x5e_A Thioredoxin domain cont 32.3 82 0.0028 26.6 6.0 42 489-531 22-65 (126)
394 2f8a_A Glutathione peroxidase 32.3 61 0.0021 30.9 5.7 45 482-530 41-89 (208)
395 2hyx_A Protein DIPZ; thioredox 32.1 55 0.0019 34.5 5.8 44 483-530 77-124 (352)
396 1we0_A Alkyl hydroperoxide red 32.0 39 0.0013 31.0 4.2 46 483-532 26-76 (187)
397 1nho_A Probable thioredoxin; b 32.0 31 0.0011 26.8 3.0 38 494-531 5-43 (85)
398 1wmj_A Thioredoxin H-type; str 31.7 13 0.00044 31.6 0.7 42 489-531 35-77 (130)
399 4hde_A SCO1/SENC family lipopr 31.7 53 0.0018 30.1 5.0 47 482-530 26-77 (170)
400 3qou_A Protein YBBN; thioredox 31.5 25 0.00085 34.5 2.9 42 489-532 25-69 (287)
401 1z6m_A Conserved hypothetical 31.5 76 0.0026 28.7 6.0 43 331-375 24-69 (175)
402 1h75_A Glutaredoxin-like prote 31.5 1.1E+02 0.0039 23.7 6.4 14 338-351 3-16 (81)
403 3ztl_A Thioredoxin peroxidase; 31.4 75 0.0026 30.4 6.3 56 483-541 64-122 (222)
404 1uul_A Tryparedoxin peroxidase 30.9 57 0.0019 30.5 5.2 53 483-540 31-88 (202)
405 3f9u_A Putative exported cytoc 30.3 33 0.0011 31.0 3.3 44 488-531 45-92 (172)
406 3hz8_A Thiol:disulfide interch 30.2 66 0.0023 30.2 5.5 41 333-375 23-64 (193)
407 1xvq_A Thiol peroxidase; thior 30.0 37 0.0013 31.0 3.7 46 482-533 38-87 (175)
408 2qsi_A Putative hydrogenase ex 29.6 52 0.0018 30.5 4.5 50 482-533 24-79 (137)
409 2c0d_A Thioredoxin peroxidase 29.4 51 0.0017 32.0 4.7 50 489-541 55-109 (221)
410 2i81_A 2-Cys peroxiredoxin; st 29.0 53 0.0018 31.4 4.7 49 489-540 51-104 (213)
411 2yan_A Glutaredoxin-3; oxidore 28.9 92 0.0032 26.2 5.7 24 412-438 60-83 (105)
412 2b7k_A SCO1 protein; metalloch 28.8 66 0.0023 30.1 5.2 46 482-531 35-88 (200)
413 2pn8_A Peroxiredoxin-4; thiore 28.7 65 0.0022 30.8 5.2 55 483-542 43-102 (211)
414 3cxg_A Putative thioredoxin; m 28.3 45 0.0015 29.1 3.8 40 489-530 39-79 (133)
415 2jne_A Hypothetical protein YF 28.3 24 0.00082 31.6 1.9 23 666-688 57-84 (101)
416 2h01_A 2-Cys peroxiredoxin; th 28.0 41 0.0014 31.1 3.6 49 489-540 30-83 (192)
417 3mhs_C SAGA-associated factor 27.3 65 0.0022 28.8 4.4 43 639-681 35-81 (99)
418 3pwf_A Rubrerythrin; non heme 27.0 30 0.001 33.2 2.4 20 665-686 150-169 (170)
419 2znm_A Thiol:disulfide interch 26.8 68 0.0023 29.5 4.9 39 333-375 21-62 (195)
420 2kuc_A Putative disulphide-iso 26.6 68 0.0023 27.1 4.5 43 488-530 25-71 (130)
421 1zye_A Thioredoxin-dependent p 26.6 68 0.0023 30.7 5.0 51 483-538 51-106 (220)
422 1q98_A Thiol peroxidase, TPX; 26.0 64 0.0022 29.0 4.4 46 482-532 37-86 (165)
423 1oaz_A Thioredoxin 1; immune s 26.0 13 0.00046 32.2 -0.2 45 487-531 18-77 (123)
424 1psq_A Probable thiol peroxida 25.4 75 0.0026 28.4 4.8 46 482-532 36-85 (163)
425 3gkn_A Bacterioferritin comigr 25.3 1.2E+02 0.004 26.8 6.0 54 483-539 30-86 (163)
426 1fo5_A Thioredoxin; disulfide 25.2 28 0.00095 27.1 1.6 39 493-531 5-44 (85)
427 1xg8_A Hypothetical protein SA 25.0 82 0.0028 28.6 4.7 40 513-552 38-82 (111)
428 3zrd_A Thiol peroxidase; oxido 24.8 60 0.002 30.8 4.1 47 481-532 71-121 (200)
429 1un2_A DSBA, thiol-disulfide i 23.5 44 0.0015 32.1 2.9 43 333-375 112-156 (197)
430 1wgm_A Ubiquitin conjugation f 23.2 36 0.0012 29.4 2.1 28 663-690 15-43 (98)
431 2kl8_A OR15; structural genomi 23.0 1.5E+02 0.0052 24.7 5.6 41 496-542 7-59 (85)
432 1gh9_A 8.3 kDa protein (gene M 22.3 26 0.00089 29.4 0.9 25 655-683 9-33 (71)
433 3ed3_A Protein disulfide-isome 22.3 80 0.0027 32.0 4.8 44 485-530 29-76 (298)
434 3ic4_A Glutaredoxin (GRX-1); s 21.2 44 0.0015 27.0 2.1 23 413-438 56-78 (92)
435 1dl6_A Transcription factor II 20.4 41 0.0014 26.8 1.7 14 665-678 6-19 (58)
436 3kp9_A Vkorc1/thioredoxin doma 20.2 20 0.00069 37.2 -0.3 35 325-361 188-223 (291)
No 1
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.42 E-value=1.2e-12 Score=122.57 Aligned_cols=123 Identities=17% Similarity=0.284 Sum_probs=103.1
Q ss_pred CCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCC
Q 044391 322 SSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMP 398 (691)
Q Consensus 322 ~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MP 398 (691)
.+| .+.++.++||.|+|+|.+.||++| +.+.|. +|++++.+ .+++||.|++ |.+.+.+..+...++
T Consensus 37 ~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~--~~v~vv~v~~--------d~~~~~~~~~~~~~~ 105 (165)
T 3s9f_A 37 QAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS--KNFEIILASW--------DEEEDDFNAYYAKMP 105 (165)
T ss_dssp TTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--TTEEEEEEEC--------CCSHHHHHHHHTTCS
T ss_pred CCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC--CCeEEEEEec--------CCCHHHHHHHHHhCC
Confidence 455 899999999999999999999877 457799 99998742 4799999997 556678889999999
Q ss_pred eeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCC-CceecccHHHHHHHh-CcccccCCh
Q 044391 399 WYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQ-GRILNQNAFHMLWIW-GNLAFPFSA 458 (691)
Q Consensus 399 WyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pq-Gkv~~~NA~~mI~~w-G~~AFPFT~ 458 (691)
|+.+|+.. ......+.+.|++.++|+++++|++ |+++..++.+.+..- ....||+..
T Consensus 106 ~~~~~~~~---~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~~~~~~~d~~~~~fpw~~ 164 (165)
T 3s9f_A 106 WLSIPFAN---RNIVEALTKKYSVESIPTLIGLNADTGDTVTTRARHALTQDPMGEQFPWRD 164 (165)
T ss_dssp SEECCTTC---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred CcccccCc---hhHHHHHHHHcCCCCCCEEEEEeCCCCEEEecccHHHHhhCcccccCCCCC
Confidence 99999975 3344778899999999999999998 999999998877554 456699864
No 2
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.39 E-value=3e-12 Score=115.17 Aligned_cols=126 Identities=17% Similarity=0.295 Sum_probs=104.7
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+...+|+.+.++.++||.|+|+|.+.||++| +.+.|. +|++++.+ .+++||.|++ |.+.+...++..
T Consensus 13 l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~~vv~v~~--------d~~~~~~~~~~~ 82 (144)
T 1i5g_A 13 VLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK--KNFEVMLISW--------DESAEDFKDYYA 82 (144)
T ss_dssp EEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--TTEEEEEEEC--------CSSHHHHHHHHT
T ss_pred EEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC--CCEEEEEEeC--------CCCHHHHHHHHH
Confidence 4445678899999999999999999999887 457789 99998742 4799999996 446677888899
Q ss_pred CCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeC-CCCceecccHHHHHHHhCc-ccccCC
Q 044391 396 MMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVD-PQGRILNQNAFHMLWIWGN-LAFPFS 457 (691)
Q Consensus 396 ~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~-pqGkv~~~NA~~mI~~wG~-~AFPFT 457 (691)
.++|..+|+.. ......+.+.|++.++|+++++| ++|+++..++...+..-+. ..||++
T Consensus 83 ~~~~~~~~~~~---~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~ 143 (144)
T 1i5g_A 83 KMPWLALPFED---RKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQARTMVVKDPEAKDFPWP 143 (144)
T ss_dssp TCSSEECCTTC---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred hCCccccccCc---hHHHHHHHHHcCCCCCCEEEEEECCCCcEEeccchhhhhhCcccccCCCC
Confidence 99999999863 23456778889999999999999 8999999999999988874 457764
No 3
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.37 E-value=6.8e-12 Score=112.27 Aligned_cols=124 Identities=19% Similarity=0.298 Sum_probs=102.1
Q ss_pred cCCCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcC
Q 044391 320 DGSSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAM 396 (691)
Q Consensus 320 ~g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~ 396 (691)
...+| .+.+++++||.|+|+|.+.||++|. .+.|. +|++++. ..+++||.|++ |.+.+.+.++...
T Consensus 15 ~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~--~~~~~vv~i~~--------d~~~~~~~~~~~~ 83 (144)
T 1o73_A 15 LSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHV--AKNFEVVLISW--------DENESDFHDYYGK 83 (144)
T ss_dssp BCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TTTEEEEEEEC--------CSSHHHHHHHHTT
T ss_pred ecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhcc--CCCEEEEEEeC--------CCCHHHHHHHHHh
Confidence 34566 8999999999999999999998874 57789 9999873 24799999986 4456778899999
Q ss_pred CCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeC-CCCceecccHHHHHHHhCc-ccccCC
Q 044391 397 MPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVD-PQGRILNQNAFHMLWIWGN-LAFPFS 457 (691)
Q Consensus 397 MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~-pqGkv~~~NA~~mI~~wG~-~AFPFT 457 (691)
++|+.+|+.. ......+.+.|++.+.|+++++| ++|+++..++...+..-+. ..||+.
T Consensus 84 ~~~~~~~~~~---~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~W~ 143 (144)
T 1o73_A 84 MPWLALPFDQ---RSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRVIEDPDGANFPWP 143 (144)
T ss_dssp CSSEECCTTC---HHHHHHHHHHHTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred CCceEeeccc---hhHHHHHHHHcCCCCCCEEEEEECCCCeEEecchhhHHhhCCCccCCCCC
Confidence 9999999863 23456778889999999999999 8999999999998887764 446653
No 4
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.34 E-value=5e-12 Score=114.18 Aligned_cols=125 Identities=18% Similarity=0.261 Sum_probs=102.8
Q ss_pred cCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcC
Q 044391 320 DGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAM 396 (691)
Q Consensus 320 ~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~ 396 (691)
...+| .+.+++++||.|+|+|.+.||++| +.+.|. +|++++.+ .+++||.|++ |.+.+.+.++...
T Consensus 15 ~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~--~~~~vv~v~~--------d~~~~~~~~~~~~ 83 (146)
T 1o8x_A 15 RRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES--KNFEVVFCTW--------DEEEDGFAGYFAK 83 (146)
T ss_dssp EETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--TTEEEEEEEC--------CCSHHHHHHHHTT
T ss_pred EcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc--CCeEEEEEeC--------CCCHHHHHHHHHH
Confidence 33466 899999999999999999999877 457799 99998732 4799999986 4566788999999
Q ss_pred CCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeC-CCCceecccHHHHHHHhCc-ccccCCh
Q 044391 397 MPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVD-PQGRILNQNAFHMLWIWGN-LAFPFSA 458 (691)
Q Consensus 397 MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~-pqGkv~~~NA~~mI~~wG~-~AFPFT~ 458 (691)
++|+.+|+.. ......+.+.|++.++|+++++| ++|+++..++...+..-+. .+||+.+
T Consensus 84 ~~~~~~~~~~---~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~~ 144 (146)
T 1o8x_A 84 MPWLAVPFAQ---SEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATLVKDPEGEQFPWKD 144 (146)
T ss_dssp CSSEECCGGG---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHTTCTTCTTTTCCC
T ss_pred CCceeeccch---hhHHHHHHHHhCCCCCCEEEEEECCCCeEEEecchhHHhhCCccccCCCCC
Confidence 9999999862 23456788889999999999999 8999999999988876663 5677753
No 5
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.67 E-value=1e-11 Score=110.42 Aligned_cols=114 Identities=15% Similarity=0.174 Sum_probs=88.8
Q ss_pred CCCceeecce-ecCc-EEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc-
Q 044391 322 SSRTRVNIEV-LRRK-HVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA- 395 (691)
Q Consensus 322 ~~~~kV~Is~-L~gK-~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~- 395 (691)
.+|..+.+++ ++|| .|+|+|.+.||++| +.+.|. +|++++++ +.+++||.|++ |.+.+...++..
T Consensus 12 ~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~-~~~~~v~~v~~--------d~~~~~~~~~~~~ 82 (143)
T 2lus_A 12 KNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDD-SAPFEIIFVSS--------DRSEDDMFQYMME 82 (143)
Confidence 4566799999 9999 99999999999887 457789 99998754 56899999986 223333444443
Q ss_pred -CCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecccHHHHHHH
Q 044391 396 -MMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQNAFHMLWI 448 (691)
Q Consensus 396 -~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~NA~~mI~~ 448 (691)
..||..+|+.+ ...+.+.+.|++.+.|+++++|++|+++..++...+..
T Consensus 83 ~~~~~~~~~~~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~ 132 (143)
T 2lus_A 83 SHGDWLAIPYRS----GPASNVTAKYGITGIPALVIVKKDGTLISMNGRGEVQS 132 (143)
Confidence 44899888865 33456777899999999999999999999988876553
No 6
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.02 E-value=8.1e-10 Score=101.39 Aligned_cols=108 Identities=13% Similarity=0.257 Sum_probs=84.1
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+...+|+.+.+++++||.|+|+|.+.||++| +++.|. +|++++.+ +++||.|++ |..++....+..
T Consensus 20 l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~---~~~vv~i~~--------d~~~~~~~~~~~ 88 (152)
T 2lrt_A 20 LKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ---GFEIYQISL--------DGDEHFWKTSAD 88 (152)
T ss_dssp EEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---TEEEEEEEC--------SCCHHHHHHHHT
T ss_pred EEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC---CeEEEEEEc--------cCCHHHHHHHHh
Confidence 3445678899999999999999999999887 457799 99998743 699999986 333445566666
Q ss_pred CCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceeccc
Q 044391 396 MMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQN 441 (691)
Q Consensus 396 ~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~N 441 (691)
.+||..+.-++ .....+.+.|++.+.|+.+++|++|+++...
T Consensus 89 ~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (152)
T 2lrt_A 89 NLPWVCVRDAN----GAYSSYISLYNVTNLPSVFLVNRNNELSARG 130 (152)
T ss_dssp TCSSEEEECSS----GGGCHHHHHHTCCSCSEEEEEETTTEEEEET
T ss_pred CCCceEEECCC----CcchHHHHHcCcccCceEEEECCCCeEEEec
Confidence 79988776544 2122355678999999999999999998753
No 7
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.97 E-value=6e-10 Score=100.19 Aligned_cols=107 Identities=9% Similarity=0.030 Sum_probs=75.7
Q ss_pred CCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCC
Q 044391 322 SSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMP 398 (691)
Q Consensus 322 ~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MP 398 (691)
.+|+.+++++++||.|+|+|.+.||++| +++.|. +|++.+ +.+++||.|++ |. +.++-++|-+ ...++
T Consensus 20 ~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~---~~~~~vv~vs~-d~----~~~~~~~~~~-~~~~~ 90 (143)
T 4fo5_A 20 GNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFG---PDKIAMCSISM-DE----KESIFTETVK-IDKLD 90 (143)
T ss_dssp ----CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSC---TTTEEEEEEEC-CS----CHHHHHHHHH-HHTCC
T ss_pred CCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC---cCCEEEEEEEc-cC----CHHHHHHHHH-HhCCC
Confidence 5667899999999999999999999877 457788 998876 34799999986 31 1222233433 24688
Q ss_pred e-eeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceeccc
Q 044391 399 W-YTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQN 441 (691)
Q Consensus 399 W-yAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~N 441 (691)
| ..+..+. .....+.+.|++.++|+.+++|++|+++..+
T Consensus 91 ~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (143)
T 4fo5_A 91 LSTQFHEGL----GKESELYKKYDLRKGFKNFLINDEGVIIAAN 130 (143)
T ss_dssp GGGEEECTT----GGGSHHHHHTTGGGCCCEEEECTTSBEEEES
T ss_pred Cceeeeccc----ccchHHHHHcCCCCCCcEEEECCCCEEEEcc
Confidence 8 4444332 1123566779999999999999999998764
No 8
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.95 E-value=6.7e-09 Score=94.23 Aligned_cols=110 Identities=21% Similarity=0.152 Sum_probs=82.3
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+...+|+.+.+++++||.|+|+|.+.||++|. .+.|. +|++++. .+++||.|++ |. +.+.-++|-.- .
T Consensus 14 l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~---~~~~vv~v~~-d~----~~~~~~~~~~~-~ 84 (152)
T 2lrn_A 14 GIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKD---KGFTIYGVST-DR----REEDWKKAIEE-D 84 (152)
T ss_dssp EECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTT---TTEEEEEEEC-CS----CHHHHHHHHHH-H
T ss_pred eEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcc---CCeEEEEEEc-cC----CHHHHHHHHHH-h
Confidence 33456778999999999999999999998874 56788 9998863 4699999986 21 12233444332 3
Q ss_pred CCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceeccc
Q 044391 396 MMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQN 441 (691)
Q Consensus 396 ~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~N 441 (691)
.+||..+.-+. .....+.+.|++.+.|+++++|++|+++...
T Consensus 85 ~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 126 (152)
T 2lrn_A 85 KSYWNQVLLQK----DDVKDVLESYCIVGFPHIILVDPEGKIVAKE 126 (152)
T ss_dssp TCCSEEEEECH----HHHHHHHHHTTCCSSCEEEEECTTSEEEEEC
T ss_pred CCCCeEEeccc----chhHHHHHHhCCCcCCeEEEECCCCeEEEee
Confidence 67777665431 2346677889999999999999999998764
No 9
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.92 E-value=6.8e-09 Score=93.98 Aligned_cols=111 Identities=13% Similarity=0.196 Sum_probs=81.5
Q ss_pred ecCCCCceeecc--eecCcEEEEEEecCCCCh--hh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHH
Q 044391 319 VDGSSRTRVNIE--VLRRKHVLLLISSLDLSD--EE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFE 391 (691)
Q Consensus 319 ~~g~~~~kV~Is--~L~gK~VlL~fSal~~~~--~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~ 391 (691)
+...+|+.+.++ .++||.|+|+|-+.||++ |. ++.|. +|++++. +.+++||.|++ |. +.+.-++|-
T Consensus 16 l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~--~~~~~~v~v~~-d~----~~~~~~~~~ 88 (150)
T 3fw2_A 16 LPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKK--NKYIGMLGISL-DV----DKQQWKDAI 88 (150)
T ss_dssp EEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTT--CSSEEEEEEEC-CS----CHHHHHHHH
T ss_pred eECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhcc--CCCeEEEEEEc-CC----CHHHHHHHH
Confidence 344667789999 999999999999999988 84 57799 9999831 34699999986 21 122233333
Q ss_pred HHhcCCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceeccc
Q 044391 392 QLQAMMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQN 441 (691)
Q Consensus 392 ~~~~~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~N 441 (691)
. ...+||..+.-+. .....+.+.|++.+.|+++++|++|+++...
T Consensus 89 ~-~~~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 133 (150)
T 3fw2_A 89 K-RDTLDWEQVCDFG----GLNSEVAKQYSIYKIPANILLSSDGKILAKN 133 (150)
T ss_dssp H-HTTCCSEEECCSC----GGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred H-HhCCCceEEEcCc----ccchHHHHHcCCCccCeEEEECCCCEEEEcc
Confidence 2 2356887765442 1234566779999999999999999999765
No 10
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.86 E-value=2.9e-09 Score=95.61 Aligned_cols=107 Identities=11% Similarity=0.092 Sum_probs=79.1
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH----HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHH
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH----LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQ 392 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~----iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~ 392 (691)
+...+|+.+.++.++||.|+|+|-+.||++| +++.|. +|++.+ +.+++||.|+. |.+.+.+..
T Consensus 16 l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~---~~~~~vi~i~~--------d~~~~~~~~ 84 (142)
T 3eur_A 16 YTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTA---AKKLKVLSIYP--------DEELDEWKK 84 (142)
T ss_dssp EEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHH---TTSEEEEEEEC--------SSCHHHHHH
T ss_pred EEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhc---cCCeEEEEEEc--------CCCHHHHHH
Confidence 3446677899999999999999999999887 445554 477776 35699999986 344455555
Q ss_pred HhcCC--CeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceeccc
Q 044391 393 LQAMM--PWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQN 441 (691)
Q Consensus 393 ~~~~M--PWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~N 441 (691)
+...+ +|..+.-+ .....+.+.|++.+.|+++++|++|+++..+
T Consensus 85 ~~~~~~~~~~~~~d~-----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (142)
T 3eur_A 85 HRNDFAKEWTNGYDK-----ELVIKNKNLYDLRAIPTLYLLDKNKTVLLKD 130 (142)
T ss_dssp HGGGSCTTSEEEECT-----TCHHHHTTCSCCTTCSEEEEECTTCBEEEEE
T ss_pred HHHhcccccccccCc-----cchhhhhhhcCCCcCCeEEEECCCCcEEecC
Confidence 54444 56654333 3333467789999999999999999999765
No 11
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.85 E-value=9.4e-09 Score=93.15 Aligned_cols=104 Identities=11% Similarity=0.079 Sum_probs=79.1
Q ss_pred CCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCC
Q 044391 322 SSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMP 398 (691)
Q Consensus 322 ~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MP 398 (691)
.+|+.+.+++++||.|+|+|.+.||++| +.+.|. +|++++ +.+++||.|++ | +.++...|-+- ..++
T Consensus 12 ~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~---~~~v~vv~v~~-d-----~~~~~~~~~~~-~~~~ 81 (151)
T 3raz_A 12 KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQK---KGSVDMVGIAL-D-----TSDNIGNFLKQ-TPVS 81 (151)
T ss_dssp TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSC---TTTEEEEEEES-S-----CHHHHHHHHHH-SCCS
T ss_pred cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhc---cCCeEEEEEEC-C-----ChHHHHHHHHH-cCCC
Confidence 5677899999999999999999999877 457788 999885 45799999997 4 24455556443 2455
Q ss_pred eeeecCCCCCchHHHHHHHHhhC--cCCceEEEEeCCCCceec
Q 044391 399 WYTVQHPTIIEPAVVKYAKEVWK--FSKKAILVPVDPQGRILN 439 (691)
Q Consensus 399 WyAVp~~d~i~~~~~r~ike~f~--~~~iP~LVvL~pqGkv~~ 439 (691)
|..+...+ ...+.+.+.|+ +.+.|+.+++|++|+++.
T Consensus 82 ~~~~~~~~----~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~ 120 (151)
T 3raz_A 82 YPIWRYTG----ANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQ 120 (151)
T ss_dssp SCEEEECC----SCHHHHHHTTTCCSCCSSEEEEEETTTTEEE
T ss_pred CceEecCc----cchHHHHHHhCCccCCCCEEEEECCCCcEEE
Confidence 55554433 23455677799 999999999999999865
No 12
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.84 E-value=3.2e-08 Score=89.99 Aligned_cols=113 Identities=12% Similarity=0.102 Sum_probs=84.4
Q ss_pred CCCCceeecceecCcEEEEEEecCCCCh-h--hhHHHH-HHHHhhccCC-CCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 321 GSSRTRVNIEVLRRKHVLLLISSLDLSD-E--EILVLH-LYREHKAREE-FDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 321 g~~~~kV~Is~L~gK~VlL~fSal~~~~-~--e~~~L~-iY~~lk~~~~-~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
..+|+.+++++++||.|+|+|.+.||++ | +++.|. +|++++...+ .+++||+|++ |.. .-+.+..++|-+-+
T Consensus 10 ~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~-d~~-~d~~~~~~~~~~~~- 86 (164)
T 2ggt_A 10 THTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISI-DPE-RDTKEAIANYVKEF- 86 (164)
T ss_dssp ETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEES-CTT-TCCHHHHHHHHHTT-
T ss_pred eCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEe-CCC-CCCHHHHHHHHHHc-
Confidence 3567789999999999999999999987 7 457799 9999875322 4899999996 421 00123345565533
Q ss_pred CCCeeeecCCCCCchHHHHHHHHhhCcCCce---------------EEEEeCCCCceecc
Q 044391 396 MMPWYTVQHPTIIEPAVVKYAKEVWKFSKKA---------------ILVPVDPQGRILNQ 440 (691)
Q Consensus 396 ~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP---------------~LVvL~pqGkv~~~ 440 (691)
.++|..+.-. ....+.+.+.|++...| ..+++||+|+++..
T Consensus 87 ~~~~~~l~~~----~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 142 (164)
T 2ggt_A 87 SPKLVGLTGT----REEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDY 142 (164)
T ss_dssp CSSCEEEECC----HHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEE
T ss_pred CCCeEEEeCC----HHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEE
Confidence 4688776542 34556678889999999 89999999999864
No 13
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.82 E-value=5.8e-09 Score=92.96 Aligned_cols=105 Identities=9% Similarity=0.097 Sum_probs=74.3
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChhhh--HHH---H-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHH
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDEEI--LVL---H-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQ 392 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L---~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~ 392 (691)
+...+|+.+.++.++||.|+|+|.+.||++|.. +.| . +|++.+. .+++||.|++ |.+.+....
T Consensus 12 l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~---~~~~~v~v~~--------d~~~~~~~~ 80 (142)
T 3ewl_A 12 YVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN---GTLRVLAIYP--------DENREEWAT 80 (142)
T ss_dssp EECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH---TSEEEEEEEC--------SSCHHHHHH
T ss_pred EECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc---CCeEEEEEEe--------cCCHHHHHH
Confidence 344667889999999999999999999988743 333 3 6777763 3599999986 333444444
Q ss_pred HhcC--CCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 393 LQAM--MPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 393 ~~~~--MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+... ++|..+.-+ ...-...+.|++.+.|+++++|++|+++.
T Consensus 81 ~~~~~~~~~~~~~d~-----~~~~~~~~~~~v~~~P~~~lid~~G~i~~ 124 (142)
T 3ewl_A 81 KAVYMPQGWIVGWNK-----AGDIRTRQLYDIRATPTIYLLDGRKRVIL 124 (142)
T ss_dssp HHTTSCTTCEEEECT-----TCHHHHTTCSCCCSSSEEEEECTTCBEEE
T ss_pred HHHHcCCCcceeeCC-----ccchhhHHHcCCCCCCeEEEECCCCCEEe
Confidence 4444 455544333 22222245799999999999999999986
No 14
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.79 E-value=2.5e-08 Score=88.54 Aligned_cols=111 Identities=15% Similarity=0.222 Sum_probs=80.0
Q ss_pred ecCCCCceeecc--eecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHH
Q 044391 319 VDGSSRTRVNIE--VLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQL 393 (691)
Q Consensus 319 ~~g~~~~kV~Is--~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~ 393 (691)
+...+|..+.++ .++||.|+|+|.+.||++| ..+.|. ++++++. +.+++||.|++ |. +.+.-++|-.
T Consensus 16 l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~--~~~~~~v~v~~-d~----~~~~~~~~~~- 87 (148)
T 3fkf_A 16 LPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKK--NKNFAMLGISL-DI----DREAWETAIK- 87 (148)
T ss_dssp EEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTT--CTTEEEEEEEC-CS----CHHHHHHHHH-
T ss_pred eeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CCCeEEEEEEC-CC----CHHHHHHHHH-
Confidence 344577789999 9999999999999999776 456788 9988731 45699999986 21 1223334432
Q ss_pred hcCCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceeccc
Q 044391 394 QAMMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQN 441 (691)
Q Consensus 394 ~~~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~N 441 (691)
...++|..+..+. .....+.+.|++.+.|+++++|++|+++...
T Consensus 88 ~~~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 131 (148)
T 3fkf_A 88 KDTLSWDQVCDFT----GLSSETAKQYAILTLPTNILLSPTGKILARD 131 (148)
T ss_dssp HTTCCSEEECCSC----GGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred HcCCCceEEEccC----CcchHHHHhcCCCCcCEEEEECCCCeEEEec
Confidence 2456777665442 1133556779999999999999999998664
No 15
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.75 E-value=4.7e-09 Score=93.22 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=77.9
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+...+|..+.++.++||.|+|+|.+.||++| +.+.|. +|++++.+ ++++|.|++-+ +.+.-++|-.-+
T Consensus 16 l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~---~~~~v~v~~d~-----~~~~~~~~~~~~- 86 (148)
T 3hcz_A 16 MTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK---GIQVYAANIER-----KDEEWLKFIRSK- 86 (148)
T ss_dssp CBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG---TEEEEEEECCS-----SSHHHHHHHHHH-
T ss_pred EecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC---CEEEEEEEecC-----CHHHHHHHHHHc-
Confidence 3445677899999999999999999999877 457799 99998743 69999998721 123334444333
Q ss_pred CCC-eeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 396 MMP-WYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 396 ~MP-WyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
.++ |..+.-++ ....+.+.|++.+.|+++++|++|+++..
T Consensus 87 ~~~~~~~~~d~~-----~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 127 (148)
T 3hcz_A 87 KIGGWLNVRDSK-----NHTDFKITYDIYATPVLYVLDKNKVIIAK 127 (148)
T ss_dssp TCTTSEEEECTT-----CCCCHHHHHCCCSSCEEEEECTTCBEEEE
T ss_pred CCCCceEEeccc-----cchhHHHhcCcCCCCEEEEECCCCcEEEe
Confidence 344 44443332 22235667999999999999999999865
No 16
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.75 E-value=2.4e-08 Score=89.75 Aligned_cols=102 Identities=15% Similarity=0.137 Sum_probs=74.3
Q ss_pred CCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCe
Q 044391 323 SRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPW 399 (691)
Q Consensus 323 ~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPW 399 (691)
++..+.++.++||.|+|+|.+.||++|. .+.|. +|++++.+ +++||.|++ |. +.++-.+|-+- ...+|
T Consensus 17 ~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~---~~~~v~v~~-d~----~~~~~~~~~~~-~~~~~ 87 (152)
T 3gl3_A 17 KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK---GFQVVAVNL-DA----KTGDAMKFLAQ-VPAEF 87 (152)
T ss_dssp SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG---TEEEEEEEC-CS----SHHHHHHHHHH-SCCCS
T ss_pred CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC---CeEEEEEEC-CC----CHHHHHHHHHH-cCCCC
Confidence 6678999999999999999999998874 46788 99998754 599999986 21 12233333332 22344
Q ss_pred eeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 400 YTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 400 yAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
..+.-++ ..+.+.|++.+.|+++++|++|+++..
T Consensus 88 ~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (152)
T 3gl3_A 88 TVAFDPK-------GQTPRLYGVKGMPTSFLIDRNGKVLLQ 121 (152)
T ss_dssp EEEECTT-------CHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred ceeECCc-------chhHHHcCCCCCCeEEEECCCCCEEEE
Confidence 4433322 235677999999999999999999864
No 17
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.72 E-value=1.8e-08 Score=90.55 Aligned_cols=108 Identities=12% Similarity=0.123 Sum_probs=79.5
Q ss_pred eecCCCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh
Q 044391 318 VVDGSSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ 394 (691)
Q Consensus 318 l~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~ 394 (691)
-+...+|+.+.+++++||.|+|+|.+.||++|. .+.|. +|++.+ +.++.+|.|++ |. +++.-++|-.-
T Consensus 14 ~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~---~~~~~~v~v~~-d~----~~~~~~~~~~~- 84 (152)
T 2lja_A 14 SYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYA---GKDIHFVSLSC-DK----NKKAWENMVTK- 84 (152)
T ss_dssp EEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHST---TSSEEEEEEEC-CS----CHHHHHHHHHH-
T ss_pred EeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhc---cCCeEEEEEEc-cC----cHHHHHHHHHh-
Confidence 344467788999999999999999999998874 46788 888875 35699999986 21 12233444332
Q ss_pred cCCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 395 AMMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 395 ~~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
..++|+.+.... + ..+.+.|++.+.|+++++|++|+++..
T Consensus 85 ~~~~~~~~~~d~--~----~~~~~~~~v~~~P~~~lid~~G~i~~~ 124 (152)
T 2lja_A 85 DQLKGIQLHMGT--D----RTFMDAYLINGIPRFILLDRDGKIISA 124 (152)
T ss_dssp HTCCSEEEECSS--C----THHHHHTTCCSSCCEEEECTTSCEEES
T ss_pred cCCCCceeecCc--c----hhHHHHcCcCCCCEEEEECCCCeEEEc
Confidence 367887666543 2 245567999999999999999999874
No 18
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.71 E-value=1.5e-07 Score=86.26 Aligned_cols=114 Identities=15% Similarity=0.085 Sum_probs=83.5
Q ss_pred cCCCCceeecceecCcEEEEEEecCCCCh-h--hhHHHH-HHHHhhccC-CCCeeEEEEecccCCCCCChhhHHHHHHHh
Q 044391 320 DGSSRTRVNIEVLRRKHVLLLISSLDLSD-E--EILVLH-LYREHKARE-EFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ 394 (691)
Q Consensus 320 ~g~~~~kV~Is~L~gK~VlL~fSal~~~~-~--e~~~L~-iY~~lk~~~-~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~ 394 (691)
...+|+.+.+++++||.|+|+|.+.||++ | +++.|. +|+++++.. ..+++||+|++ |... =+.+..+.|-+-+
T Consensus 12 ~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~-d~~~-d~~~~~~~~~~~~ 89 (171)
T 2rli_A 12 LDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITV-DPER-DDVEAMARYVQDF 89 (171)
T ss_dssp EETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEES-CSTT-CCHHHHHHHHHTT
T ss_pred EeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEE-CCCC-CCHHHHHHHHHHc
Confidence 34567789999999999999999999987 7 457799 999987531 35799999996 4200 0123345554433
Q ss_pred cCCCeeeecCCCCCchHHHHHHHHhhCcCCce---------------EEEEeCCCCceecc
Q 044391 395 AMMPWYTVQHPTIIEPAVVKYAKEVWKFSKKA---------------ILVPVDPQGRILNQ 440 (691)
Q Consensus 395 ~~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP---------------~LVvL~pqGkv~~~ 440 (691)
..+|..+.-+ ....+.+.+.|++...| +.+++|++|+++..
T Consensus 90 -~~~~~~l~~~----~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 145 (171)
T 2rli_A 90 -HPRLLGLTGS----TKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDY 145 (171)
T ss_dssp -CTTCCEEECC----HHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEE
T ss_pred -CCCeEEEeCC----HHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEE
Confidence 4677666532 24456677889999888 99999999999874
No 19
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.71 E-value=4.5e-08 Score=88.72 Aligned_cols=112 Identities=13% Similarity=0.062 Sum_probs=74.4
Q ss_pred CCceeecceecCcEEEEEEecCCCChh--h-hHHHH-HHHHhhccCCCCeeEEEEecccCCCCC-ChhhHHHHHHHhcCC
Q 044391 323 SRTRVNIEVLRRKHVLLLISSLDLSDE--E-ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAW-DEGYRQKFEQLQAMM 397 (691)
Q Consensus 323 ~~~kV~Is~L~gK~VlL~fSal~~~~~--e-~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W-~D~d~~~F~~~~~~M 397 (691)
+|+.+.+++++||.|+|+|.+.||++| + ++.|. +|++++ +.++++|.|++-....+- +.+.-++|-.- ..+
T Consensus 17 ~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~---~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~-~~~ 92 (158)
T 3eyt_A 17 SATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFP---EDKVAVLGLHTVFEHHEAMTPISLKAFLHE-YRI 92 (158)
T ss_dssp CSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSC---TTTEEEEEEECCCSCGGGSCHHHHHHHHHH-TTC
T ss_pred CCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhC---cCCEEEEEEEecccccccCCHHHHHHHHHH-cCC
Confidence 467899999999999999999999776 4 67799 999986 346999999862100000 13333444332 233
Q ss_pred CeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 398 PWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 398 PWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
+|-.+--++ .......+.+.|++.+.|+.+++|++|+++..
T Consensus 93 ~~~~~~d~~--~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 133 (158)
T 3eyt_A 93 KFPVGVDQP--GDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAH 133 (158)
T ss_dssp CSCEEEECC--CSSSSCHHHHHTTCCSSSEEEEECTTSEEEEE
T ss_pred CceEEEcCc--cchhhHHHHHHcCCCCCCEEEEECCCCCEEEE
Confidence 433222222 00111145667999999999999999999864
No 20
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.69 E-value=3.8e-08 Score=88.74 Aligned_cols=106 Identities=13% Similarity=0.195 Sum_probs=76.1
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+...+|+.+.++.++||.|+|+|.+.||++|. .+.|. ++++++. .+++||.|++-+ +.+.-+.|-.-+
T Consensus 11 l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~---~~v~vv~v~~d~-----~~~~~~~~~~~~- 81 (151)
T 2f9s_A 11 LEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS---QGVEIVAVNVGE-----SKIAVHNFMKSY- 81 (151)
T ss_dssp EECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG---GTEEEEEEEESC-----CHHHHHHHHHHH-
T ss_pred eEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc---CCeEEEEEECCC-----CHHHHHHHHHHc-
Confidence 33456778999999999999999999998774 46788 9998874 369999998722 233344454332
Q ss_pred CCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 396 MMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 396 ~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
.++|-.+.-++ ..+.+.|++.+.|+++++|++|+++..
T Consensus 82 ~~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 119 (151)
T 2f9s_A 82 GVNFPVVLDTD-------RQVLDAYDVSPLPTTFLINPEGKVVKV 119 (151)
T ss_dssp TCCSCEEEETT-------SHHHHHTTCCSSCEEEEECTTSEEEEE
T ss_pred CCCceEEECCc-------hHHHHhcCCCCCCeEEEECCCCcEEEE
Confidence 34443332221 235567999999999999999999864
No 21
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.64 E-value=2.7e-07 Score=84.20 Aligned_cols=119 Identities=16% Similarity=0.196 Sum_probs=78.8
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEeccc--CCCCCChhhHHHH--H
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVD--RSIAWDEGYRQKF--E 391 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd--~s~~W~D~d~~~F--~ 391 (691)
+...+|+.+.+++++||.|+|+|.+.||++| +++.|. +|++++.+ +++||.|++-+ ....++.++-++| +
T Consensus 16 l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~---~~~vv~v~~d~~~~~~~~~~~~~~~~~~~ 92 (169)
T 2v1m_A 16 VKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK---GLRILAFPCNQFGGQEPWAEAEIKKFVTE 92 (169)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---TEEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred eecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC---CeEEEEEECCccCCCCCCCHHHHHHHHHH
Confidence 3446678899999999999999999999887 567799 99999743 59999998621 0012344556677 4
Q ss_pred HHhcCCCeee-ecCCCCCchHHHHHHHHh-hC-----cCCceEEEEeCCCCceecc
Q 044391 392 QLQAMMPWYT-VQHPTIIEPAVVKYAKEV-WK-----FSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 392 ~~~~~MPWyA-Vp~~d~i~~~~~r~ike~-f~-----~~~iP~LVvL~pqGkv~~~ 440 (691)
.+.-..|.++ +........+..+++++. ++ ++.+|..+++|++|+++..
T Consensus 93 ~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 148 (169)
T 2v1m_A 93 KYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKR 148 (169)
T ss_dssp HHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEE
T ss_pred hcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEE
Confidence 4444444433 111111111244555543 24 5567999999999999865
No 22
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.64 E-value=7.2e-08 Score=87.31 Aligned_cols=113 Identities=12% Similarity=0.063 Sum_probs=74.5
Q ss_pred CCceeecceecCcEEEEEEecCCCChh--h-hHHHH-HHHHhhccCCCCeeEEEEecccCCCC-CChhhHHHHHHHhcCC
Q 044391 323 SRTRVNIEVLRRKHVLLLISSLDLSDE--E-ILVLH-LYREHKAREEFDYAIVWLPIVDRSIA-WDEGYRQKFEQLQAMM 397 (691)
Q Consensus 323 ~~~kV~Is~L~gK~VlL~fSal~~~~~--e-~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~-W~D~d~~~F~~~~~~M 397 (691)
+|+.+.+++++||.|+|+|.+.||++| + ++.|. +|++++. .+++||.|++-....+ =+.+.-++|-+- ..+
T Consensus 19 ~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~---~~v~~v~v~~~~~~~~~~~~~~~~~~~~~-~~~ 94 (160)
T 3lor_A 19 NHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDE---SQVQVIGLHSVFEHHDVMTPEALKVFIDE-FGI 94 (160)
T ss_dssp SSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCT---TTEEEEEEECCCSCGGGSCHHHHHHHHHH-TTC
T ss_pred CCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCc---CCcEEEEEeccccccccCCHHHHHHHHHH-cCC
Confidence 457799999999999999999999876 3 56799 9999863 4699999986200000 023333444332 233
Q ss_pred CeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 398 PWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 398 PWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
+|-.+--++. .....+.+.+.|++.++|+.+++|++|+++..
T Consensus 95 ~~~~~~d~~~-~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 136 (160)
T 3lor_A 95 KFPVAVDMPR-EGQRIPSTMKKYRLEGTPSIILADRKGRIRQV 136 (160)
T ss_dssp CSCEEEECCC-TTCSSCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred CCcEEECCcc-ccchhhhHHHhcccCccceEEEECCCCcEEEE
Confidence 3332222221 01112236677999999999999999999864
No 23
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.63 E-value=3.4e-07 Score=84.18 Aligned_cols=114 Identities=15% Similarity=0.167 Sum_probs=77.1
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCC-hh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCC-ChhhHHHHHHH
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLS-DE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAW-DEGYRQKFEQL 393 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~-~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W-~D~d~~~F~~~ 393 (691)
+...+|+.+++++++||.|+|+|-+.||+ +| +++.|. +|++++++ +.+++||.|++ |. +. +.+..++|-+-
T Consensus 18 l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~-~~~~~vv~is~-d~--~~d~~~~~~~~~~~ 93 (174)
T 1xzo_A 18 FQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAE-NIDVRIISFSV-DP--ENDKPKQLKKFAAN 93 (174)
T ss_dssp EECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHT-TCCCEEEEEES-CT--TTCCHHHHHHHHTT
T ss_pred EEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhc-CCcEEEEEEEe-CC--CCCCHHHHHHHHHH
Confidence 34567888999999999999999999997 66 567799 99999876 45899999996 31 00 12233444332
Q ss_pred hcCCCe---eeecCCCCCchHHHH-HHHHh-----------hCcCCceEEEEeCCCCceecc
Q 044391 394 QAMMPW---YTVQHPTIIEPAVVK-YAKEV-----------WKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 394 ~~~MPW---yAVp~~d~i~~~~~r-~ike~-----------f~~~~iP~LVvL~pqGkv~~~ 440 (691)
+ .+++ ..+.-++ .+..+ +-... +++...|+.+++|++|+++..
T Consensus 94 ~-~~~~~~~~~l~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~ 151 (174)
T 1xzo_A 94 Y-PLSFDNWDFLTGYS---QSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKD 151 (174)
T ss_dssp S-CCCGGGEEEEBCSC---HHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEE
T ss_pred c-CCCCcceEEEeCCC---HHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEE
Confidence 2 3343 3333222 33333 33223 346789999999999999864
No 24
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.62 E-value=1.4e-07 Score=90.89 Aligned_cols=115 Identities=10% Similarity=0.109 Sum_probs=78.7
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCCh-h--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSD-E--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ 394 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~-~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~ 394 (691)
+...+|+.|.+++++||.|+|+|.+.||++ | +++.|. +|++++++.+.+++||.|++ |...+ +.+..+.|-+-+
T Consensus 26 l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~-D~~~d-~~~~~~~~~~~~ 103 (200)
T 2b7k_A 26 LEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITC-DPARD-SPAVLKEYLSDF 103 (200)
T ss_dssp EEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEES-CTTTC-CHHHHHHHHTTS
T ss_pred EEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEEC-CCCCC-CHHHHHHHHHHc
Confidence 344677889999999999999999999987 7 457799 99999854356899999996 31000 122233443322
Q ss_pred cCCCeeeecCCCCCchHHHHHHHHhhCcC-Cce---------------EEEEeCCCCceecc
Q 044391 395 AMMPWYTVQHPTIIEPAVVKYAKEVWKFS-KKA---------------ILVPVDPQGRILNQ 440 (691)
Q Consensus 395 ~~MPWyAVp~~d~i~~~~~r~ike~f~~~-~iP---------------~LVvL~pqGkv~~~ 440 (691)
..+|..++-. ....+.+.+.|++. ++| ..+++||+|+++..
T Consensus 104 -~~~~~~l~~~----~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~ 160 (200)
T 2b7k_A 104 -HPSILGLTGT----FDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDA 160 (200)
T ss_dssp -CTTCEEEECC----HHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEE
T ss_pred -CCCceEEeCC----HHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEE
Confidence 3567766642 24455666778887 454 78999999999854
No 25
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.61 E-value=6.2e-08 Score=83.82 Aligned_cols=110 Identities=13% Similarity=0.117 Sum_probs=75.4
Q ss_pred cCCCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcC
Q 044391 320 DGSSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAM 396 (691)
Q Consensus 320 ~g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~ 396 (691)
...+|+.+.++.++||.|+|+|.+.||++|. .+.|. ++++. +.++.+|.|...+.+ .+.+.+....+...
T Consensus 8 ~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~----~~~~~~v~i~~~~~~---~~~~~~~~~~~~~~ 80 (138)
T 4evm_A 8 MGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEA----GDDYVVLTVVSPGHK---GEQSEADFKNWYKG 80 (138)
T ss_dssp EBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTC----TTTEEEEEEECTTST---TCCCHHHHHHHHTT
T ss_pred ECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHh----CCCcEEEEEEcCCCC---chhhHHHHHHHHhh
Confidence 3456778999999999999999999998774 45677 77762 456888888432211 23455566666665
Q ss_pred CCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 397 MPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 397 MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
.++...|.- .+. ...+.+.|++.+.|+++++|++|+++..
T Consensus 81 ~~~~~~~~~--~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 120 (138)
T 4evm_A 81 LDYKNLPVL--VDP--SGKLLETYGVRSYPTQAFIDKEGKLVKT 120 (138)
T ss_dssp CCCTTCCEE--ECT--TCHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred cCCCCeeEE--ECc--chHHHHHcCcccCCeEEEECCCCcEEEe
Confidence 544222211 111 1245667999999999999999999754
No 26
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.61 E-value=1.4e-07 Score=85.56 Aligned_cols=109 Identities=6% Similarity=0.040 Sum_probs=74.6
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+...+|+.+.++.++||.|+|+|.+.||++|. .+.|. +|++++. .++++|.|++ |. +...-++|-.- .
T Consensus 19 l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~---~~v~~v~v~~-d~----~~~~~~~~~~~-~ 89 (165)
T 3or5_A 19 GVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWAS---RGFTFVGIAV-NE----QLPNVKNYMKT-Q 89 (165)
T ss_dssp EECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTT---TTEEEEEEEC-SC----CHHHHHHHHHH-H
T ss_pred eeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc---CCeEEEEEEC-CC----CHHHHHHHHHH-c
Confidence 34467788999999999999999999998874 46788 9999873 4599999986 21 13333445332 3
Q ss_pred CCCeeeecCCCCCchHHHHHHHHhh--CcCCceEEEEeCCCCceecc
Q 044391 396 MMPWYTVQHPTIIEPAVVKYAKEVW--KFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 396 ~MPWyAVp~~d~i~~~~~r~ike~f--~~~~iP~LVvL~pqGkv~~~ 440 (691)
.++|-.+.-+ .+..+.+...+ ++.+.|+++++|++|+++..
T Consensus 90 ~~~~~~~~~~----~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 132 (165)
T 3or5_A 90 GIIYPVMMAT----PELIRAFNGYIDGGITGIPTSFVIDASGNVSGV 132 (165)
T ss_dssp TCCSCEEECC----HHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEE
T ss_pred CCCCceEecC----HHHHHHHhhhhccCCCCCCeEEEECCCCcEEEE
Confidence 4555444322 22222221111 79999999999999999754
No 27
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.60 E-value=1.5e-07 Score=86.06 Aligned_cols=120 Identities=13% Similarity=0.043 Sum_probs=83.6
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+...+|+.+.++.++||.|+|+|.+.||++|. ++.|. +|++++ +.++.+|.|+. | .+.++|-. ..
T Consensus 26 l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~v~~-d-------~~~~~~~~-~~ 93 (158)
T 3hdc_A 26 LPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFP---KGDLVVLAVNV-E-------KRFPEKYR-RA 93 (158)
T ss_dssp EECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSS---TTSEEEEEEEC-S-------SSCCGGGG-GC
T ss_pred eEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcc---cCCeEEEEEeC-C-------HHHHHHHH-Hc
Confidence 44567788999999999999999999998774 46788 998876 34688888875 2 22222322 23
Q ss_pred CCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceec-------ccHHHHHHHhCcccccCC
Q 044391 396 MMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILN-------QNAFHMLWIWGNLAFPFS 457 (691)
Q Consensus 396 ~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~-------~NA~~mI~~wG~~AFPFT 457 (691)
.++|-.+.-++ ..+.+.|++.+.|+++++|++|+++. .+.-+++..+...-|||.
T Consensus 94 ~~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~~~ 155 (158)
T 3hdc_A 94 PVSFNFLSDAT-------GQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGHHH 155 (158)
T ss_dssp CCSCEEEECTT-------SHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC----
T ss_pred CCCceEEECch-------HHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccccc
Confidence 45554443222 24567799999999999999999874 456667777776666663
No 28
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.60 E-value=2.2e-07 Score=88.39 Aligned_cols=118 Identities=14% Similarity=0.146 Sum_probs=81.0
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccC---CCCCChhhHHHHH-
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDR---SIAWDEGYRQKFE- 391 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~---s~~W~D~d~~~F~- 391 (691)
+...+|+.+++++++||.|+|+|.+.||++| +++.|. +|++++.+ +++||.|++ |. -..++.++.++|-
T Consensus 33 l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~---~v~vv~vs~-d~~~~~~~~~~~~~~~~~~ 108 (190)
T 2vup_A 33 VLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ---GFTVLAFPC-NQFGGQEPGNEEEIKEFVC 108 (190)
T ss_dssp CBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---TCEEEEEEC-CCSTTCCCSCHHHHHHHHH
T ss_pred EEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC---CeEEEEEEc-CccCCCCCCCHHHHHHHHH
Confidence 3345677899999999999999999999887 567799 99999743 599999986 21 0112344555664
Q ss_pred -HHhcCCCeeee-cCCCCCchHHHHHHH-HhhCcCCce------EEEEeCCCCceecc
Q 044391 392 -QLQAMMPWYTV-QHPTIIEPAVVKYAK-EVWKFSKKA------ILVPVDPQGRILNQ 440 (691)
Q Consensus 392 -~~~~~MPWyAV-p~~d~i~~~~~r~ik-e~f~~~~iP------~LVvL~pqGkv~~~ 440 (691)
.+.-..|+++- ........+..+++. +.+++.+.| +.+++|++|+++..
T Consensus 109 ~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 166 (190)
T 2vup_A 109 TKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVER 166 (190)
T ss_dssp HHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEE
T ss_pred HhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEE
Confidence 44445555541 211111122445444 447888999 99999999999865
No 29
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.60 E-value=2.6e-07 Score=85.21 Aligned_cols=106 Identities=18% Similarity=0.275 Sum_probs=79.3
Q ss_pred eecCCCCceeecceecCcE-EEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHH
Q 044391 318 VVDGSSRTRVNIEVLRRKH-VLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQ 392 (691)
Q Consensus 318 l~~g~~~~kV~Is~L~gK~-VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~ 392 (691)
-+...+|+.+.+++++||. |+|+|- +.||++| +++.|. +|++++. .+++||.|+. | +.+..++|-+
T Consensus 12 ~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~---~~v~vv~vs~-d-----~~~~~~~~~~ 82 (161)
T 3drn_A 12 EGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKD---YDVVVIGVSS-D-----DINSHKRFKE 82 (161)
T ss_dssp EEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHT---TCEEEEEEES-C-----CHHHHHHHHH
T ss_pred EeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH---cCCEEEEEeC-C-----CHHHHHHHHH
Confidence 3344677889999999998 999998 9999776 557799 9999984 3599999986 4 3445556654
Q ss_pred HhcCCCeeeecCCCCCchHHHHHHHHhhCcCC----ceEEEEeCCCCceecc
Q 044391 393 LQAMMPWYTVQHPTIIEPAVVKYAKEVWKFSK----KAILVPVDPQGRILNQ 440 (691)
Q Consensus 393 ~~~~MPWyAVp~~d~i~~~~~r~ike~f~~~~----iP~LVvL~pqGkv~~~ 440 (691)
-+ .+||..+.-++ ..+.+.|++.+ .|..+++|++|+++..
T Consensus 83 ~~-~~~~~~~~d~~-------~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~ 126 (161)
T 3drn_A 83 KY-KLPFILVSDPD-------KKIRELYGAKGFILPARITFVIDKKGIIRHI 126 (161)
T ss_dssp HT-TCCSEEEECTT-------SHHHHHTTCCCSSSCCCEEEEECTTSBEEEE
T ss_pred Hh-CCCceEEECCc-------HHHHHHcCCCCcCcccceEEEECCCCEEEEE
Confidence 33 45655444332 24556699999 9999999999999754
No 30
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.60 E-value=9.9e-08 Score=90.67 Aligned_cols=118 Identities=11% Similarity=0.113 Sum_probs=77.3
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccC---CCCCChhhHHHHHH
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDR---SIAWDEGYRQKFEQ 392 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~---s~~W~D~d~~~F~~ 392 (691)
+...+|+.|.+++++||.|+|+|-+.||++| +++.|. +|++++.+ +++||.|++ |. ....+.++-++|-.
T Consensus 31 l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~---~~~vi~is~-d~~~~~e~~~~~~~~~~~~ 106 (187)
T 3dwv_A 31 VLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ---GFTVLAFPS-NQFGGQEPGNEEEIKEFVC 106 (187)
T ss_dssp CBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG---TCEEEEEEB-CCCSSCSSSBTTHHHHSCC
T ss_pred EEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC---CeEEEEEEC-cccCCCCCCCHHHHHHHHH
Confidence 3445677899999999999999999999776 568899 99999854 599999996 21 00112223333322
Q ss_pred HhcCCCeeeecC---CCCCchHHHHHHHH----hhCcCCce---EEEEeCCCCceecc
Q 044391 393 LQAMMPWYTVQH---PTIIEPAVVKYAKE----VWKFSKKA---ILVPVDPQGRILNQ 440 (691)
Q Consensus 393 ~~~~MPWyAVp~---~d~i~~~~~r~ike----~f~~~~iP---~LVvL~pqGkv~~~ 440 (691)
-.-.++|-.+.. ......+..+++++ .+++..+| +.+++|++|+++..
T Consensus 107 ~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~ 164 (187)
T 3dwv_A 107 TKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVER 164 (187)
T ss_dssp BCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEE
T ss_pred hccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEE
Confidence 111444443321 11111234556654 34667788 99999999999876
No 31
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.59 E-value=2.9e-07 Score=86.52 Aligned_cols=115 Identities=12% Similarity=0.085 Sum_probs=81.4
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCC-hh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLS-DE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ 394 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~-~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~ 394 (691)
+...+|+.|++++++||.|+|+|-+.||+ .| +++.|. +|+++++. +.+++||.|++ |+ .=+.+..++|-+-+
T Consensus 13 l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~-~~~~~vv~is~-d~--~d~~~~~~~~~~~~ 88 (170)
T 3me7_A 13 LVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTP-GKDFWVITFTF-DP--KDTLEDIKRFQKEY 88 (170)
T ss_dssp EEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCB-TTTBEEEEEEC-CT--TCCHHHHHHHHHHT
T ss_pred EEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhc-CCceEEEEEEC-CC--CCCHHHHHHHHHHc
Confidence 34467788999999999999999999996 35 567799 99999754 67899999997 42 00234445665544
Q ss_pred c-CC-CeeeecCCCCCchHHHHHHHHhhCc---------CCceEEEEeCCCCceecc
Q 044391 395 A-MM-PWYTVQHPTIIEPAVVKYAKEVWKF---------SKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 395 ~-~M-PWyAVp~~d~i~~~~~r~ike~f~~---------~~iP~LVvL~pqGkv~~~ 440 (691)
. .. .|.-+--. +....+.+.+.|++ ...|.++++||+|+++..
T Consensus 89 ~~~~~~w~~l~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~ 142 (170)
T 3me7_A 89 GIDGKGWKVVKAK---TSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDY 142 (170)
T ss_dssp TCCSSSEEEEEES---SHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEE
T ss_pred CCCCCCeEEEeCC---CHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEE
Confidence 3 33 37433222 23456666777664 456899999999999853
No 32
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.58 E-value=6.4e-08 Score=88.00 Aligned_cols=107 Identities=8% Similarity=-0.023 Sum_probs=77.3
Q ss_pred CCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCC
Q 044391 322 SSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMP 398 (691)
Q Consensus 322 ~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MP 398 (691)
.+|+.+.++.++||.|+|+|.+.||++|. .+.|. +|++++. .+++||.|++-+.. .+...+.+..+...+.
T Consensus 26 ~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~---~~~~vv~v~~~~~~---~~~~~~~~~~~~~~~~ 99 (164)
T 2h30_A 26 ADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKF---SSANLITVASPGFL---HEKKDGEFQKWYAGLN 99 (164)
T ss_dssp TTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGG---TTSEEEEEECTTST---TCCCTTHHHHHHTTSC
T ss_pred CCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccc---CCcEEEEEEcCCCc---cccCHHHHHHHHHhCC
Confidence 45667899999999999999999998874 57788 9988864 35999999862110 1223455666666544
Q ss_pred e--eeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 399 W--YTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 399 W--yAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
| +.+-... ...+.+.|++.+.|+++++|++|+++..
T Consensus 100 ~~~~~~~~d~------~~~~~~~~~v~~~P~~~lid~~G~i~~~ 137 (164)
T 2h30_A 100 YPKLPVVTDN------GGTIAQNLNISVYPSWALIGKDGDVQRI 137 (164)
T ss_dssp CTTSCEEECT------TCHHHHHTTCCSSSEEEEECTTSCEEEE
T ss_pred CCcceEEEcC------chHHHHHcCCCccceEEEECCCCcEEEE
Confidence 3 3443322 2245667999999999999999998853
No 33
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.58 E-value=7.4e-08 Score=88.28 Aligned_cols=104 Identities=12% Similarity=0.071 Sum_probs=72.2
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCC--------------CCCC
Q 044391 321 GSSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRS--------------IAWD 383 (691)
Q Consensus 321 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s--------------~~W~ 383 (691)
..+++.+.++.++||.|+|+|.+.||++|. .+.|. +|++.+ +++||.|++ |+. ..=+
T Consensus 24 ~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-----~v~vv~i~~-d~~~~~~~~~~~~~~~~~~~~ 97 (165)
T 3ha9_A 24 TIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-----EISVIAIDF-WTAEALKALGLNKPGYPPPDT 97 (165)
T ss_dssp BTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-----TEEEEEEEC-CSHHHHHHHTCCSTTSCCCCC
T ss_pred cCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-----CcEEEEEEe-cccccccccccccccCCCCCC
Confidence 356778999999999999999999998874 46688 888764 699999986 200 0002
Q ss_pred hhhHHHHHHHhcCC-CeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 384 EGYRQKFEQLQAMM-PWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 384 D~d~~~F~~~~~~M-PWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.++-++|-.-+ .+ +|-.+-- + ..+.+.|++.+.|+++++|++|+++.
T Consensus 98 ~~~~~~~~~~~-~~~~~~~~~d-~-------~~~~~~~~v~~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 98 PEMFRKFIANY-GDPSWIMVMD-D-------GSLVEKFNVRSIDYIVIMDKSSNVLY 145 (165)
T ss_dssp HHHHHHHHHHH-SCTTSEEEEC-C-------SHHHHHTTCCSSSEEEEEETTCCEEE
T ss_pred HHHHHHHHHHc-CCCCeeEEeC-h-------HHHHHHhCCCCceEEEEEcCCCcEEE
Confidence 23334443322 23 3333222 1 24556689999999999999999988
No 34
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.57 E-value=1.4e-07 Score=83.18 Aligned_cols=105 Identities=11% Similarity=0.130 Sum_probs=73.2
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+...++..+.++. +||.|+|+|.+.||++|. .+.|. +|++++ +.++++|.|++-+. +.+.+....+..
T Consensus 20 l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~v~~d~~-----~~~~~~~~~~~~ 90 (145)
T 3erw_A 20 MKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHP---SDSVKLVTVNLVNS-----EQNQQVVEDFIK 90 (145)
T ss_dssp EECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCC---CSSEEEEEEECGGG-----SSCHHHHHHHHH
T ss_pred eecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcC---CCCEEEEEEEccCC-----cCCHHHHHHHHH
Confidence 4445677899999 999999999999998874 46688 888875 34699999987221 113333333322
Q ss_pred --CCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 396 --MMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 396 --~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+|-.+.-++ ..+.+.|++.+.|+++++|++|+++.
T Consensus 91 ~~~~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~ 129 (145)
T 3erw_A 91 ANKLTFPIVLDSK-------GELMKEYHIITIPTSFLLNEKGEIEK 129 (145)
T ss_dssp HTTCCSCEEECSS-------SHHHHHTTCCEESEEEEECTTCCEEE
T ss_pred HcCCceeEEEcCc-------hhHHHhcCcCccCeEEEEcCCCcEEE
Confidence 33433322221 24567799999999999999999875
No 35
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.57 E-value=1.6e-07 Score=92.39 Aligned_cols=103 Identities=14% Similarity=0.110 Sum_probs=78.4
Q ss_pred CCceeecceecCcEEEEEEec-CCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh----
Q 044391 323 SRTRVNIEVLRRKHVLLLISS-LDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ---- 394 (691)
Q Consensus 323 ~~~kV~Is~L~gK~VlL~fSa-l~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~---- 394 (691)
+|+.|.+++++||.|+|+|-+ .||++| +++.|. +|++++. .+++||.|++ | +.++.+.|.+..
T Consensus 58 ~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~---~~v~vv~Is~-D-----~~~~~~~~~~~~~~~~ 128 (222)
T 3ztl_A 58 EFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNS---RNCQVIACST-D-----SQYSHLAWDNLDRKSG 128 (222)
T ss_dssp EEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHT---TTEEEEEEES-S-----CHHHHHHHHHSCGGGT
T ss_pred CCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH---CCCEEEEEEC-C-----CHHHHHHHHHHhhhhc
Confidence 347899999999999999996 999876 567799 9999983 4699999996 4 245566676543
Q ss_pred --cCCCeeeecCCCCCchHHHHHHHHhhCcC------CceEEEEeCCCCceeccc
Q 044391 395 --AMMPWYTVQHPTIIEPAVVKYAKEVWKFS------KKAILVPVDPQGRILNQN 441 (691)
Q Consensus 395 --~~MPWyAVp~~d~i~~~~~r~ike~f~~~------~iP~LVvL~pqGkv~~~N 441 (691)
..++|..+.-++ ..+.+.|++. ..|..+++|++|+++...
T Consensus 129 ~~~~~~~~~l~D~~-------~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~ 176 (222)
T 3ztl_A 129 GLGHMKIPLLADRK-------QEISKAYGVFDEEDGNAFRGLFIIDPNGILRQIT 176 (222)
T ss_dssp SCCSCSSCEEECSS-------SHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEE
T ss_pred cccccceeEEeCCc-------hHHHHHcCCeecCCCCccceEEEECCCCeEEEEE
Confidence 156666554432 2345568888 899999999999998763
No 36
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.57 E-value=5e-07 Score=82.56 Aligned_cols=118 Identities=13% Similarity=0.278 Sum_probs=78.5
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccC---CCCCChhhHHHHHH
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDR---SIAWDEGYRQKFEQ 392 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~---s~~W~D~d~~~F~~ 392 (691)
+...+|+.+.+++++||.|+|+|.+.||++| +++.|. +|++++.+ +++||.|++ |. ...-+.+.-++|-.
T Consensus 17 l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~---~~~vv~vs~-d~~~~~~~~~~~~~~~~~~ 92 (170)
T 2p5q_A 17 VKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ---GLEILAFPC-NQFGEEEPGTNDQITDFVC 92 (170)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---TEEEEEEEC-CTTTTCCCSCHHHHHHHHH
T ss_pred EEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC---CEEEEEEEC-CCCCCCCCCCHHHHHHHHH
Confidence 3445677899999999999999999999887 457799 99998743 699999986 21 00012334455544
Q ss_pred --HhcCCCeee-ecCCCCCchHHHHHHH-HhhCc--CCce---EEEEeCCCCceecc
Q 044391 393 --LQAMMPWYT-VQHPTIIEPAVVKYAK-EVWKF--SKKA---ILVPVDPQGRILNQ 440 (691)
Q Consensus 393 --~~~~MPWyA-Vp~~d~i~~~~~r~ik-e~f~~--~~iP---~LVvL~pqGkv~~~ 440 (691)
+.-..|++. +.-......+..++++ +.+++ .++| +.+++|++|+++..
T Consensus 93 ~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~ 149 (170)
T 2p5q_A 93 TRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDR 149 (170)
T ss_dssp HHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEE
T ss_pred HhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEe
Confidence 233445543 1111111123445554 34566 7889 99999999999875
No 37
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.56 E-value=9.8e-08 Score=83.48 Aligned_cols=102 Identities=12% Similarity=0.012 Sum_probs=74.0
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+...+|..+.++.++||.|+|+|.+.||++|. .+.|. ++++.+ +++++.|++-+ +.++-++|-.- .
T Consensus 9 l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-----~~~~~~v~~~~-----~~~~~~~~~~~-~ 77 (136)
T 1lu4_A 9 ATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-----AVTFVGIATRA-----DVGAMQSFVSK-Y 77 (136)
T ss_dssp EEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----TSEEEEEECSS-----CHHHHHHHHHH-H
T ss_pred eecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-----CcEEEEEEcCC-----CHHHHHHHHHH-c
Confidence 33456778999999999999999999998874 46677 887764 68999998621 23444555443 2
Q ss_pred CCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 396 MMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 396 ~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
.++|..+.-++ ..+.+.|++.+.|+++++|++|+++
T Consensus 78 ~~~~~~~~d~~-------~~~~~~~~i~~~P~~~lid~~G~i~ 113 (136)
T 1lu4_A 78 NLNFTNLNDAD-------GVIWARYNVPWQPAFVFYRADGTST 113 (136)
T ss_dssp TCCSEEEECTT-------SHHHHHTTCCSSSEEEEECTTSCEE
T ss_pred CCCceEEECCc-------hhHHHhcCCCCCCEEEEECCCCcEE
Confidence 44555443322 2355679999999999999999997
No 38
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.54 E-value=2.4e-07 Score=83.37 Aligned_cols=108 Identities=12% Similarity=0.091 Sum_probs=76.7
Q ss_pred eecCCCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh
Q 044391 318 VVDGSSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ 394 (691)
Q Consensus 318 l~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~ 394 (691)
-+...+|..+.++.++||.|+|+|.+.||++|. .+.|. +|++++ +.++++|.|++ |. -+.+..++|-...
T Consensus 12 ~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~v~~-d~---~~~~~~~~~~~~~ 84 (154)
T 3kcm_A 12 TLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMA---GKPFRMLCVSI-DE---GGKVAVEEFFRKT 84 (154)
T ss_dssp EEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT---TSSEEEEEEEC-CT---THHHHHHHHHHHH
T ss_pred EEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc---cCCeEEEEEEc-CC---cchHHHHHHHHHc
Confidence 344467788999999999999999999998764 46788 988876 34699999986 31 0123334444333
Q ss_pred cCCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 395 AMMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 395 ~~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
..+|..+.-++ ..+.+.|++.+.|..+++|++|+++..
T Consensus 85 -~~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 122 (154)
T 3kcm_A 85 -GFTLPVLLDAD-------KRVGKLYGTTGVPETFVIDRHGVILKK 122 (154)
T ss_dssp -CCCCCEEECTT-------CHHHHHHTCCSBCEEEEECTTSBEEEE
T ss_pred -CCCeeEEecCc-------hHHHHHhCCCCCCeEEEECCCCcEEEE
Confidence 34554443222 235667999999999999999999764
No 39
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.52 E-value=1.4e-07 Score=89.98 Aligned_cols=100 Identities=16% Similarity=0.102 Sum_probs=75.0
Q ss_pred ceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh---cCC
Q 044391 325 TRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ---AMM 397 (691)
Q Consensus 325 ~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~---~~M 397 (691)
+.|++++++||.|+|+|- +.||++| +++.|. +|++++. .+++||.|++ | +.+..++|-+-+ ..+
T Consensus 36 ~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~---~~v~vv~Vs~-d-----~~~~~~~~~~~~~~~~~~ 106 (195)
T 2bmx_A 36 TTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFED---RDAQILGVSI-D-----SEFAHFQWRAQHNDLKTL 106 (195)
T ss_dssp EEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHT---TTEEEEEEES-S-----CHHHHHHHHHHCTTGGGC
T ss_pred cEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHH---CCCEEEEEEC-C-----CHHHHHHHHHHhccccCC
Confidence 789999999999999999 9999776 567799 9999873 4799999986 4 134455665443 134
Q ss_pred CeeeecCCCCCchHHHHHHHHhhCcC-----CceEEEEeCCCCceecc
Q 044391 398 PWYTVQHPTIIEPAVVKYAKEVWKFS-----KKAILVPVDPQGRILNQ 440 (691)
Q Consensus 398 PWyAVp~~d~i~~~~~r~ike~f~~~-----~iP~LVvL~pqGkv~~~ 440 (691)
+|..+.-++ ..+.+.|++. ..|+++++|++|+++..
T Consensus 107 ~~~~~~d~~-------~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~ 147 (195)
T 2bmx_A 107 PFPMLSDIK-------RELSQAAGVLNADGVADRVTFIVDPNNEIQFV 147 (195)
T ss_dssp CSCEEECTT-------SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEE
T ss_pred ceeEEeCCc-------hHHHHHhCCcccCCCccceEEEEcCCCeEEEE
Confidence 544333221 2445668999 99999999999999875
No 40
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.52 E-value=4.5e-07 Score=83.07 Aligned_cols=102 Identities=14% Similarity=0.122 Sum_probs=76.3
Q ss_pred CCCCceeecceecCcEEEEEEec-CCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcC
Q 044391 321 GSSRTRVNIEVLRRKHVLLLISS-LDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAM 396 (691)
Q Consensus 321 g~~~~kV~Is~L~gK~VlL~fSa-l~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~ 396 (691)
..+|+.|.+++++||.|+|+|-+ .||++| +++.|. .|++++. .+++||.|+. | +.+..++|-+-+ .
T Consensus 22 ~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~---~~~~vv~vs~-d-----~~~~~~~~~~~~-~ 91 (163)
T 3gkn_A 22 LSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDK---AGAKILGVSR-D-----SVKSHDNFCAKQ-G 91 (163)
T ss_dssp CSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHH---TTCEEEEEES-S-----CHHHHHHHHHHH-C
T ss_pred CCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHH---CCCEEEEEeC-C-----CHHHHHHHHHHh-C
Confidence 46778999999999999888887 899776 557799 9999984 3599999996 3 345556675533 4
Q ss_pred CCeeeecCCCCCchHHHHHHHHhhCcCC------------ceEEEEeCCCCceec
Q 044391 397 MPWYTVQHPTIIEPAVVKYAKEVWKFSK------------KAILVPVDPQGRILN 439 (691)
Q Consensus 397 MPWyAVp~~d~i~~~~~r~ike~f~~~~------------iP~LVvL~pqGkv~~ 439 (691)
++|-.+.-++ . .+.+.|++.. .|..+++|++|+++.
T Consensus 92 ~~~~~~~d~~---~----~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~ 139 (163)
T 3gkn_A 92 FAFPLVSDGD---E----ALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQ 139 (163)
T ss_dssp CSSCEEECTT---C----HHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEE
T ss_pred CCceEEECCc---H----HHHHHhCCccccccccccccCcceEEEEECCCCeEEE
Confidence 5555443222 2 3445688876 899999999999986
No 41
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.51 E-value=7.1e-07 Score=83.49 Aligned_cols=111 Identities=18% Similarity=0.184 Sum_probs=76.8
Q ss_pred eecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh
Q 044391 318 VVDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ 394 (691)
Q Consensus 318 l~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~ 394 (691)
-+...+|+.+.+++++||.|+|+|-+.||++| +++.|. +|++++ +.+++||.|++ |. -+.+..+.|-+-+
T Consensus 44 ~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~---~~~~~vv~v~~-d~---~~~~~~~~~~~~~ 116 (186)
T 1jfu_A 44 AFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLS---GPNFEVVAINI-DT---RDPEKPKTFLKEA 116 (186)
T ss_dssp EEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHC---BTTEEEEEEEC-CC---SCTTHHHHHHHHT
T ss_pred EeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhc---cCCcEEEEEEC-CC---CCHHHHHHHHHHc
Confidence 34456788899999999999999999999776 457799 999986 35799999986 31 1123445564433
Q ss_pred c--CCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 395 A--MMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 395 ~--~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
. ..|++.-+. ....+.+.-..+..+.|+.+++|++|+++..
T Consensus 117 ~~~~~~~~~d~~-----~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 159 (186)
T 1jfu_A 117 NLTRLGYFNDQK-----AKVFQDLKAIGRALGMPTSVLVDPQGCEIAT 159 (186)
T ss_dssp TCCTTCCEECTT-----CHHHHHHHTTTCCSSSSEEEEECTTSBEEEE
T ss_pred CCCCCceEECCc-----chHHHHhccccccCCCCEEEEECCCCCEEEE
Confidence 2 356654222 2344443222233489999999999999864
No 42
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.50 E-value=1.6e-07 Score=85.61 Aligned_cols=108 Identities=13% Similarity=0.015 Sum_probs=76.4
Q ss_pred eecCCCCceeecceecCc-EEEEEEe-cCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHH
Q 044391 318 VVDGSSRTRVNIEVLRRK-HVLLLIS-SLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQ 392 (691)
Q Consensus 318 l~~g~~~~kV~Is~L~gK-~VlL~fS-al~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~ 392 (691)
-+...+|+.+++++++|| .|+|+|- +.||++|. ++.|. +|++++ +.+++||.|++ | +.+..++|-+
T Consensus 19 ~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~---~~~~~vv~is~-d-----~~~~~~~~~~ 89 (160)
T 1xvw_A 19 TLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFE---NDDSAALAISV-G-----PPPTHKIWAT 89 (160)
T ss_dssp EEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTS---SSSEEEEEEES-C-----CHHHHHHHHH
T ss_pred EeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHH---HCCcEEEEEeC-C-----CHHHHHHHHH
Confidence 344567788999999998 8999996 99998874 56788 888876 34699999986 4 2344455644
Q ss_pred HhcCCCeeeecCCCCCchHHHHHHHHhhCcC----Cce--EEEEeCCCCceecc
Q 044391 393 LQAMMPWYTVQHPTIIEPAVVKYAKEVWKFS----KKA--ILVPVDPQGRILNQ 440 (691)
Q Consensus 393 ~~~~MPWyAVp~~d~i~~~~~r~ike~f~~~----~iP--~LVvL~pqGkv~~~ 440 (691)
-+ ..+|..+.-. .....+.+.|++. ++| ..+++|++|+++..
T Consensus 90 ~~-~~~~~~~~d~-----~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~ 137 (160)
T 1xvw_A 90 QS-GFTFPLLSDF-----WPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFA 137 (160)
T ss_dssp HH-TCCSCEEECT-----TTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEE
T ss_pred hc-CCCceEEecC-----CcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEE
Confidence 33 2344333221 0012345668998 999 99999999999865
No 43
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.50 E-value=6.2e-07 Score=84.41 Aligned_cols=117 Identities=10% Similarity=0.013 Sum_probs=77.0
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccC---CCCCChhhHHHHHH
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDR---SIAWDEGYRQKFEQ 392 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~---s~~W~D~d~~~F~~ 392 (691)
+...+|+.+++++++||.|+|+|.+.||++| +++.|. +|++++.+ +++||.|++ |. ....+.++.++|-+
T Consensus 32 l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~---~v~vv~vs~-d~~~~~e~~~~~~~~~~~~ 107 (183)
T 2obi_A 32 AKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC---GLRILAFPC-NQFGKQEPGSNEEIKEFAA 107 (183)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---TEEEEEEEC-CCSTTCCCSCHHHHHHHHH
T ss_pred EEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC---CeEEEEEEC-CCCCCCCCCCHHHHHHHHH
Confidence 3345678899999999999999999999887 557799 99999743 599999986 21 00123444555543
Q ss_pred HhcCCCeeeec---CCCCCchHHHHHHHHhh---C-----cCCceEEEEeCCCCceecc
Q 044391 393 LQAMMPWYTVQ---HPTIIEPAVVKYAKEVW---K-----FSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 393 ~~~~MPWyAVp---~~d~i~~~~~r~ike~f---~-----~~~iP~LVvL~pqGkv~~~ 440 (691)
-+ ..+|-.+. .......+..+++++.. + ++.+|+.+++|++|+++..
T Consensus 108 ~~-~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 165 (183)
T 2obi_A 108 GY-NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 165 (183)
T ss_dssp TT-TCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEE
T ss_pred Hc-CCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEE
Confidence 22 33443332 11111123455555443 2 4557999999999999864
No 44
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.50 E-value=4.6e-07 Score=84.19 Aligned_cols=117 Identities=17% Similarity=0.184 Sum_probs=71.8
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChh-hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCC--ChhhHHHHHHHhcC
Q 044391 321 GSSRTRVNIEVLRRKHVLLLISSLDLSDE-EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAW--DEGYRQKFEQLQAM 396 (691)
Q Consensus 321 g~~~~kV~Is~L~gK~VlL~fSal~~~~~-e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W--~D~d~~~F~~~~~~ 396 (691)
..+|+.|++++++||.|+|+|.+.||++| +++.|. +|++++.+ +++||.|++-+...+. +.+..++|-.-...
T Consensus 19 d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~~~~~l~~l~~~~~~~---~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~ 95 (171)
T 3cmi_A 19 DKKGQPFPFDQLKGKVVLIVNVASKCGFTPQYKELEALYKRYKDE---GFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYG 95 (171)
T ss_dssp BTTSCBCCGGGGTTCEEEEEEEESSSCCHHHHHHHHHHHHHHGGG---TEEEEEEEECSCC------------------C
T ss_pred cCCCCEecHHHcCCCEEEEEEEecCCCcchhHHHHHHHHHHhccC---CeEEEEEECcccCCCCCCCHHHHHHHHHhccC
Confidence 34677899999999999999999999777 456799 99998743 6999999862100000 11222344311123
Q ss_pred CCeeeecCCCC---CchHHHHHHH-HhhCcCCce------EEEEeCCCCceecc
Q 044391 397 MPWYTVQHPTI---IEPAVVKYAK-EVWKFSKKA------ILVPVDPQGRILNQ 440 (691)
Q Consensus 397 MPWyAVp~~d~---i~~~~~r~ik-e~f~~~~iP------~LVvL~pqGkv~~~ 440 (691)
++|..+.-++. .-.+..+++. +.+++.+.| +.+++|++|+++..
T Consensus 96 ~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 149 (171)
T 3cmi_A 96 VTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYER 149 (171)
T ss_dssp CCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEE
T ss_pred CCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEE
Confidence 44433321110 0112344443 458999999 99999999999875
No 45
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.50 E-value=1.5e-07 Score=81.95 Aligned_cols=100 Identities=14% Similarity=0.082 Sum_probs=71.2
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCC
Q 044391 321 GSSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMM 397 (691)
Q Consensus 321 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~M 397 (691)
..+|..+.++.++||.|+|+|.+.||++|. .+.|. ++++++ +++++.|++-+ +.+.-++|-.-. .+
T Consensus 12 ~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-----~~~~~~v~~~~-----~~~~~~~~~~~~-~~ 80 (136)
T 1zzo_A 12 TLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-----EVTFVGVAGLD-----QVPAMQEFVNKY-PV 80 (136)
T ss_dssp BTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----TSEEEEEECSS-----CHHHHHHHHHHT-TC
T ss_pred cCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-----CeEEEEEeCCC-----CHHHHHHHHHHc-CC
Confidence 346778999999999999999999998874 46677 887764 69999998621 233334443322 23
Q ss_pred -CeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 398 -PWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 398 -PWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
+|-.+.-.+ ..+.+.|++.+.|+++++|++|+++
T Consensus 81 ~~~~~~~d~~-------~~~~~~~~i~~~P~~~~id~~g~i~ 115 (136)
T 1zzo_A 81 KTFTQLADTD-------GSVWANFGVTQQPAYAFVDPHGNVD 115 (136)
T ss_dssp TTSEEEECTT-------CHHHHHTTCCSSSEEEEECTTCCEE
T ss_pred CceEEEEcCC-------cHHHHHcCCCCCceEEEECCCCCEE
Confidence 444333221 2355679999999999999999987
No 46
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.48 E-value=2e-07 Score=91.19 Aligned_cols=113 Identities=8% Similarity=-0.034 Sum_probs=77.7
Q ss_pred ceecCCCCceeecceecCcE-EEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCC--CCChhhHHHH
Q 044391 317 PVVDGSSRTRVNIEVLRRKH-VLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSI--AWDEGYRQKF 390 (691)
Q Consensus 317 ~l~~g~~~~kV~Is~L~gK~-VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~--~W~D~d~~~F 390 (691)
+-+...+|+.|.+++++||. |+|+|.+.||++| +++.|. +|++++. .+++||.|++-+... .-+.+..++|
T Consensus 41 f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~---~~v~vv~Vs~d~~~~~~~d~~~~~~~~ 117 (218)
T 3u5r_E 41 FVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAG---QGLAVVAINSNDAQAFPEETLERVGAE 117 (218)
T ss_dssp CCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTT---TTEEEEEEECSCTTTCGGGSHHHHHHH
T ss_pred cEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHh---CCcEEEEEECCcccccccCCHHHHHHH
Confidence 34445778899999999995 9999999999876 457799 9999874 459999998621000 0123334445
Q ss_pred HHHhcCCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 391 EQLQAMMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 391 ~~~~~~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
-+-+ .++|-.+.-++ ..+.+.|++.+.|.++++|++|+++..
T Consensus 118 ~~~~-~~~~~~l~D~~-------~~~~~~~~v~~~P~~~liD~~G~i~~~ 159 (218)
T 3u5r_E 118 VKAY-GYGFPYLKDAS-------QSVAKAYGAACTPDFFLYDRERRLVYH 159 (218)
T ss_dssp HHHH-TCCSCEEECTT-------CHHHHHHTCCEESEEEEECTTCBEEEE
T ss_pred HHHh-CCCccEEECCc-------cHHHHHcCCCCCCeEEEECCCCcEEEe
Confidence 4332 23443332221 235566899999999999999999843
No 47
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.48 E-value=9.7e-07 Score=83.52 Aligned_cols=118 Identities=10% Similarity=0.040 Sum_probs=76.9
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccC---CCCCChhhHHHHH-
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDR---SIAWDEGYRQKFE- 391 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~---s~~W~D~d~~~F~- 391 (691)
+...+|+.+++++++||.|+|+|.+.||++| +++.|. +|++++++ +++||.|++ |. ..+++.++-++|-
T Consensus 34 l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~---~v~vv~is~-d~~~~~~~~~~~~~~~~~~ 109 (185)
T 2gs3_A 34 AKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC---GLRILAFPC-NQFGKQEPGSNEEIKEFAA 109 (185)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---TEEEEEEEC-CTTTTCCCSCHHHHHHHHH
T ss_pred eEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC---CeEEEEEEC-cccCCCCCCCHHHHHHHHH
Confidence 3446678899999999999999999999887 567899 99999743 599999986 21 1123344445564
Q ss_pred HHhcCCCeee-ecCCCCCchHHHHHHHHhh---C-----cCCceEEEEeCCCCceecc
Q 044391 392 QLQAMMPWYT-VQHPTIIEPAVVKYAKEVW---K-----FSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 392 ~~~~~MPWyA-Vp~~d~i~~~~~r~ike~f---~-----~~~iP~LVvL~pqGkv~~~ 440 (691)
++.-..|.++ +........+..+++++.. + ++..|..+++|++|+++..
T Consensus 110 ~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 167 (185)
T 2gs3_A 110 GYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 167 (185)
T ss_dssp HTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEE
T ss_pred HcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEe
Confidence 3322333332 1111111123445554433 3 3346999999999999865
No 48
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.48 E-value=3.2e-07 Score=84.00 Aligned_cols=112 Identities=16% Similarity=0.293 Sum_probs=78.9
Q ss_pred cCCCCceeecceecCcEEEEEEecCCCCh-h--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCC-ChhhHHHHHHHh
Q 044391 320 DGSSRTRVNIEVLRRKHVLLLISSLDLSD-E--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAW-DEGYRQKFEQLQ 394 (691)
Q Consensus 320 ~g~~~~kV~Is~L~gK~VlL~fSal~~~~-~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W-~D~d~~~F~~~~ 394 (691)
...+| .+.+++++||.|+|+|.+.||++ | +++.|. +|++++.+...+++||.|++ |. .. +.+..+.|-+-+
T Consensus 22 ~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~-d~--~~d~~~~~~~~~~~~ 97 (172)
T 2k6v_A 22 EGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSV-DP--ERDPPEVADRYAKAF 97 (172)
T ss_dssp ECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEES-CT--TTCCHHHHHHHHHHH
T ss_pred EcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEE-CC--CCCCHHHHHHHHHHh
Confidence 34566 89999999999999999999987 7 457788 99888643114799999996 32 11 123345565543
Q ss_pred cCCCeeeecCCCCCchHHHHHHHHhhC---------------cCCceEEEEeCCCCceeccc
Q 044391 395 AMMPWYTVQHPTIIEPAVVKYAKEVWK---------------FSKKAILVPVDPQGRILNQN 441 (691)
Q Consensus 395 ~~MPWyAVp~~d~i~~~~~r~ike~f~---------------~~~iP~LVvL~pqGkv~~~N 441 (691)
..+|..+.-+ ....+.+.+.|+ +.+.|+++++| +|+++...
T Consensus 98 -~~~~~~l~d~----~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~ 153 (172)
T 2k6v_A 98 -HPSFLGLSGS----PEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLY 153 (172)
T ss_dssp -CTTEEEECCC----HHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEE
T ss_pred -CCCcEEEeCC----HHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEE
Confidence 3677766543 234455555565 46889999999 99998653
No 49
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.46 E-value=1.5e-06 Score=82.01 Aligned_cols=116 Identities=12% Similarity=0.109 Sum_probs=81.6
Q ss_pred ceecCCCCceeecceecCcEEEEEEecCCCC-hh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCCh--hhHHHH
Q 044391 317 PVVDGSSRTRVNIEVLRRKHVLLLISSLDLS-DE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDE--GYRQKF 390 (691)
Q Consensus 317 ~l~~g~~~~kV~Is~L~gK~VlL~fSal~~~-~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D--~d~~~F 390 (691)
+-+-..+|+.|.+++|+||.|+|+|-..||| .| ++.-|. +|+.+++. +.++.+|+|++ |+ ..| +..++|
T Consensus 15 F~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~-~~~v~~v~isv-Dp---~~Dtp~~l~~y 89 (170)
T 4hde_A 15 FQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEE-KLDVQFVSFSV-DP---DLDKPENLKAF 89 (170)
T ss_dssp CEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHT-TCCCEEEEEES-CT---TTCCHHHHHHH
T ss_pred cEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcc-cccceeEeeec-Cc---ccccHHHHHHH
Confidence 4455667889999999999999999999995 35 456688 99999876 77899999986 52 222 233566
Q ss_pred HHHhc--CCCeeeecCCCCCchHHHHHHHHhhCc----------CCceEEEEeCCCCceec
Q 044391 391 EQLQA--MMPWYTVQHPTIIEPAVVKYAKEVWKF----------SKKAILVPVDPQGRILN 439 (691)
Q Consensus 391 ~~~~~--~MPWyAVp~~d~i~~~~~r~ike~f~~----------~~iP~LVvL~pqGkv~~ 439 (691)
-+.+. ...|..+--++ .....+..+..|.. ..-|.++++||+|+++.
T Consensus 90 ~~~~~~~~~~~~~ltg~~--~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~ 148 (170)
T 4hde_A 90 IQKFTEDTSNWNLLTGYS--LEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMK 148 (170)
T ss_dssp HTTTCSCCTTEEEEBCSC--HHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEE
T ss_pred HHHcCCCCCCceecCccc--HHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEE
Confidence 55442 24687766544 23445555555543 33478999999999974
No 50
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.46 E-value=6.4e-07 Score=84.56 Aligned_cols=99 Identities=13% Similarity=0.116 Sum_probs=75.9
Q ss_pred eeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc---CCC
Q 044391 326 RVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA---MMP 398 (691)
Q Consensus 326 kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~---~MP 398 (691)
.+.+++++||.|+|+|- +.||++| +++.|. +|++++.+ +++||.|++ | +.+..+.|-..+. .++
T Consensus 23 ~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~---~v~vv~vs~-d-----~~~~~~~~~~~~~~~~~~~ 93 (187)
T 1we0_A 23 EVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL---GVEVYSVST-D-----THFVHKAWHENSPAVGSIE 93 (187)
T ss_dssp EEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT---TEEEEEEES-S-----CHHHHHHHHHSCHHHHTCC
T ss_pred EecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc---CCEEEEEEC-C-----CHHHHHHHHHHhccccCCC
Confidence 89999999999999999 9999776 567899 99999743 699999986 3 1344556655442 567
Q ss_pred eeeecCCCCCchHHHHHHHHhhCcC------CceEEEEeCCCCceecc
Q 044391 399 WYTVQHPTIIEPAVVKYAKEVWKFS------KKAILVPVDPQGRILNQ 440 (691)
Q Consensus 399 WyAVp~~d~i~~~~~r~ike~f~~~------~iP~LVvL~pqGkv~~~ 440 (691)
|..+.-++ ..+.+.|++. ..|+.+++|++|+++..
T Consensus 94 ~~~~~d~~-------~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~ 134 (187)
T 1we0_A 94 YIMIGDPS-------QTISRQFDVLNEETGLADRGTFIIDPDGVIQAI 134 (187)
T ss_dssp SEEEECTT-------CHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred ceEEECCc-------hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEE
Confidence 66554322 2344568998 89999999999999875
No 51
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.45 E-value=4.8e-07 Score=84.95 Aligned_cols=109 Identities=8% Similarity=-0.007 Sum_probs=74.4
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCC---CChhhHHHHHH
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIA---WDEGYRQKFEQ 392 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~---W~D~d~~~F~~ 392 (691)
+...+|+.+.+++++||.|+|+|.+.||++| +++.|. +|++++ +. ++||.|++ |.... =+.+.-++|-+
T Consensus 18 l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~---~~-~~~v~v~~-d~~~~~~~d~~~~~~~~~~ 92 (188)
T 2cvb_A 18 LPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYR---GK-VAFVGINA-NDYEKYPEDAPEKMAAFAE 92 (188)
T ss_dssp EECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTT---TT-EEEEEEEC-CCTTTCGGGSHHHHHHHHH
T ss_pred eecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhh---cC-eEEEEEEc-CccccccccCHHHHHHHHH
Confidence 3445677899999999999999999999876 457788 999876 33 99999986 21000 01223344433
Q ss_pred HhcCCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 393 LQAMMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 393 ~~~~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
-+ .++|-.+--++ ..+.+.|++.+.|+++++|++|+++..
T Consensus 93 ~~-~~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 93 EH-GIFFPYLLDET-------QEVAKAYRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp HH-TCCSCEEECSS-------SHHHHHTTCCEESEEEEECTTCBEEEE
T ss_pred Hh-CCCceEEECCc-------chHHHHcCCCCCCeEEEECCCCcEEEE
Confidence 22 23332222111 234567899999999999999999866
No 52
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.44 E-value=1.8e-06 Score=81.22 Aligned_cols=117 Identities=15% Similarity=0.177 Sum_probs=78.5
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCC--CCCChhhHHHHHH-
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRS--IAWDEGYRQKFEQ- 392 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s--~~W~D~d~~~F~~- 392 (691)
+...+|+.|++++++||.|+|+|-+.||++| +++.|. +|++++. .+++||-|++-+-. .+=+.++-++|-.
T Consensus 23 l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~---~~~~vi~is~d~~~~~~~d~~~~~~~~~~~ 99 (180)
T 3kij_A 23 VKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGP---SHFSVLAFPCNQFGESEPRPSKEVESFARK 99 (180)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTT---TSEEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred EecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhcc---CCeEEEEEECCccccCCCCCHHHHHHHHHH
Confidence 3445677899999999999999999999887 567899 9999873 46999999862100 0113344456644
Q ss_pred -HhcCCCeeeec-CCCCCchHHHHHHHHhhCcCCceE----EEEeCCCCceecc
Q 044391 393 -LQAMMPWYTVQ-HPTIIEPAVVKYAKEVWKFSKKAI----LVPVDPQGRILNQ 440 (691)
Q Consensus 393 -~~~~MPWyAVp-~~d~i~~~~~r~ike~f~~~~iP~----LVvL~pqGkv~~~ 440 (691)
+.-..|.++-. ..+.......+++.... .+.|. .+++|++|+++..
T Consensus 100 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~~~p~~~~~~~lid~~G~i~~~ 151 (180)
T 3kij_A 100 NYGVTFPIFHKIKILGSEGEPAFRFLVDSS--KKEPRWNFWKYLVNPEGQVVKF 151 (180)
T ss_dssp HHCCCSCBBCCCCCSSTTCCHHHHHHHHHH--TCCCSSTTCEEEECTTSCEEEE
T ss_pred hcCCCCceeeeeeccCccccHHHHHHHhcC--CCCccccceEEEECCCCCEEEE
Confidence 33445555411 11111223566666553 47888 9999999999854
No 53
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.41 E-value=3e-06 Score=76.02 Aligned_cols=108 Identities=10% Similarity=0.027 Sum_probs=77.0
Q ss_pred eecCCCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh
Q 044391 318 VVDGSSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ 394 (691)
Q Consensus 318 l~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~ 394 (691)
-+...+|..+.+++++||.|+|+|.+.||++|. .+.|. ++++++. .++.||.|++ |. -+.+..++|-.-
T Consensus 12 ~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~---~~~~vv~v~~-~~---~~~~~~~~~~~~- 83 (153)
T 2l5o_A 12 SLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKN---KNFQVLAVAQ-PI---DPIESVRQYVKD- 83 (153)
T ss_dssp EEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGG---TTEEEEEEEC-TT---SCHHHHHHHHHH-
T ss_pred EeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc---CCeEEEEEec-CC---CCHHHHHHHHHH-
Confidence 344456778999999999999999999998874 46788 8888863 4699999985 21 123344555432
Q ss_pred cCCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 395 AMMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 395 ~~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
..+||-.+.-++ ..+.+.|++.+.|+++++|++|+++..
T Consensus 84 ~~~~~~~~~d~~-------~~~~~~~~i~~~P~~~lid~~G~i~~~ 122 (153)
T 2l5o_A 84 YGLPFTVMYDAD-------KAVGQAFGTQVYPTSVLIGKKGEILKT 122 (153)
T ss_dssp TTCCSEEEECSS-------CHHHHHHTCCSSSEEEEECSSSCCCEE
T ss_pred cCCCceEEcCch-------HHHHHHcCCCccCeEEEECCCCcEEEE
Confidence 355654333222 235567899999999999999998743
No 54
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.40 E-value=7.1e-07 Score=83.43 Aligned_cols=109 Identities=14% Similarity=0.043 Sum_probs=74.5
Q ss_pred CCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccC---CCCeeEEEEecccCCCCCChhhHHHHHHHhcC
Q 044391 323 SRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKARE---EFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAM 396 (691)
Q Consensus 323 ~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~---~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~ 396 (691)
+|+.+.++.++||.|+|+|-+.||++| +.+.|. +|++++.+. ..+++||.|++ |. -+.+.-++|-.- ..
T Consensus 48 ~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~-d~---~~~~~~~~~~~~-~~ 122 (183)
T 3lwa_A 48 EGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINV-RD---YSRDIAQDFVTD-NG 122 (183)
T ss_dssp TTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEEC-SC---CCHHHHHHHHHH-TT
T ss_pred CCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEEC-CC---CCHHHHHHHHHH-cC
Confidence 678899999999999999999999877 457799 999987541 23448999886 21 012333445332 24
Q ss_pred CCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 397 MPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 397 MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
+||..+.-++ ....+.+. .|++.+.|..+++|++|+++..
T Consensus 123 ~~~~~~~d~~---~~~~~~~~-~~~v~~~P~~~lid~~G~i~~~ 162 (183)
T 3lwa_A 123 LDYPSIYDPP---FMTAASLG-GVPASVIPTTIVLDKQHRPAAV 162 (183)
T ss_dssp CCSCEEECTT---CGGGGGTT-TCCTTCCSEEEEECTTSCEEEE
T ss_pred CCccEEECCc---chHHHHhc-cCCCCCCCeEEEECCCCcEEEE
Confidence 5666554433 12222221 2468999999999999999754
No 55
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.40 E-value=1.7e-06 Score=76.46 Aligned_cols=106 Identities=8% Similarity=0.021 Sum_probs=71.7
Q ss_pred CCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCe
Q 044391 323 SRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPW 399 (691)
Q Consensus 323 ~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPW 399 (691)
+|..+.++.++||.|+|+|.+.||++|. .+.|. +|++++. . +.+|.|++-+....=+.+.-++|-.-. .++|
T Consensus 18 ~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~---~-~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~ 92 (148)
T 2b5x_A 18 NGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD---Q-LNVVAVHMPRSEDDLDPGKIKETAAEH-DITQ 92 (148)
T ss_dssp SCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---T-SEEEEEECCCSTTTSSHHHHHHHHHHT-TCCS
T ss_pred cCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC---C-cEEEEEEcCCCccccCHHHHHHHHHHc-CCCc
Confidence 5667899999999999999999998774 46788 8888753 2 999999862110000122334443322 3444
Q ss_pred eeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 400 YTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 400 yAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
..+.-.+ ..+.+.|++.+.|+++++|++|+++..
T Consensus 93 ~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 126 (148)
T 2b5x_A 93 PIFVDSD-------HALTDAFENEYVPAYYVFDKTGQLRHF 126 (148)
T ss_dssp CEEECSS-------CHHHHHTCCCCSSEEEEECTTCBEEEE
T ss_pred ceEECCc-------hhHHHHhCCCCCCEEEEECCCCcEEEE
Confidence 4332221 235566999999999999999998864
No 56
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.39 E-value=3.1e-07 Score=87.73 Aligned_cols=108 Identities=10% Similarity=0.074 Sum_probs=76.6
Q ss_pred CCc---eeeccee-cCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHH-
Q 044391 323 SRT---RVNIEVL-RRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQL- 393 (691)
Q Consensus 323 ~~~---kV~Is~L-~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~- 393 (691)
+|+ .|+++++ +||.|+|+|. +.||++| +++.|. +|++++. .+++||.|++ | +.+..++|-+-
T Consensus 18 ~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~---~~v~vv~Is~-d-----~~~~~~~~~~~~ 88 (198)
T 1zof_A 18 NNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHE---KGFNVIGVSI-D-----SEQVHFAWKNTP 88 (198)
T ss_dssp TSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHH---TTEEEEEEES-S-----CHHHHHHHHTSC
T ss_pred CCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHH---cCCEEEEEEC-C-----CHHHHHHHHHhh
Confidence 455 8999999 9999999999 9999776 567899 9999874 3699999986 3 13344445432
Q ss_pred hcCCCeeeecCCCCCchHHHHHHHHhhCcC-----CceEEEEeCCCCceeccc
Q 044391 394 QAMMPWYTVQHPTIIEPAVVKYAKEVWKFS-----KKAILVPVDPQGRILNQN 441 (691)
Q Consensus 394 ~~~MPWyAVp~~d~i~~~~~r~ike~f~~~-----~iP~LVvL~pqGkv~~~N 441 (691)
.....|+.++|+-..|. .+.+.+.|++. ..|..+++|++|+++...
T Consensus 89 ~~~~~~~~~~~~~~~d~--~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~ 139 (198)
T 1zof_A 89 VEKGGIGQVSFPMVADI--TKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAV 139 (198)
T ss_dssp GGGTCCCCCSSCEEECT--TSHHHHHTTCEETTTEECEEEEEEETTTEEEEEE
T ss_pred hhcccccCceeEEEECC--chHHHHHhCCcccCCcccceEEEECCCCEEEEEE
Confidence 22223444444422222 23455679998 999999999999998753
No 57
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.38 E-value=9.5e-07 Score=83.90 Aligned_cols=103 Identities=15% Similarity=0.099 Sum_probs=76.2
Q ss_pred CC--ceeeccee-cCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 323 SR--TRVNIEVL-RRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 323 ~~--~kV~Is~L-~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+| +.|+++++ +||.|+|+|- +.||++| +++.|. +|++++. .+++||.|++ | +.+..++|-.-+.
T Consensus 17 ~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~---~~v~vv~Is~-d-----~~~~~~~~~~~~~ 87 (192)
T 2h01_A 17 DNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE---RNVELLGCSV-D-----SKFTHLAWKKTPL 87 (192)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHH---TTEEEEEEES-S-----CHHHHHHHHTSCG
T ss_pred CCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH---CCCEEEEEEe-C-----CHHHHHHHHHhHH
Confidence 45 78999999 9999999999 9999776 567799 9999874 4699999986 3 2344455554332
Q ss_pred ------CCCeeeecCCCCCchHHHHHHHHhhCcC-----CceEEEEeCCCCceeccc
Q 044391 396 ------MMPWYTVQHPTIIEPAVVKYAKEVWKFS-----KKAILVPVDPQGRILNQN 441 (691)
Q Consensus 396 ------~MPWyAVp~~d~i~~~~~r~ike~f~~~-----~iP~LVvL~pqGkv~~~N 441 (691)
.++|..+.-++ +.+.+.|++. ..|..+++|++|+++...
T Consensus 88 ~~~~~~~~~~~~l~D~~-------~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~ 137 (192)
T 2h01_A 88 SQGGIGNIKHTLISDIS-------KSIARSYDVLFNESVALRAFVLIDKQGVVQHLL 137 (192)
T ss_dssp GGTCCCSCSSEEEECTT-------SHHHHHTTCEETTTEECCEEEEECTTSBEEEEE
T ss_pred hhCCccCCCcCeEECCc-------HHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEE
Confidence 45554433221 2355668998 899999999999998753
No 58
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.38 E-value=1.3e-06 Score=82.80 Aligned_cols=103 Identities=14% Similarity=0.136 Sum_probs=73.9
Q ss_pred CCCCceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcC
Q 044391 321 GSSRTRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAM 396 (691)
Q Consensus 321 g~~~~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~ 396 (691)
..+|+.|.+++++||.|+|+|- +.||++| +++.|. +|++++. .+++||.|+. | +.++.++|-+-+ .
T Consensus 38 ~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~---~~~~vv~Vs~-D-----~~~~~~~~~~~~-~ 107 (179)
T 3ixr_A 38 LSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQ---INATVLGVSR-D-----SVKSHDSFCAKQ-G 107 (179)
T ss_dssp EGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHT---TTEEEEEEES-C-----CHHHHHHHHHHH-T
T ss_pred CCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH---CCCEEEEEcC-C-----CHHHHHHHHHHc-C
Confidence 3467789999999998888876 9999766 567799 9999984 4699999986 4 345566775533 4
Q ss_pred CCeeeecCCCCCchHHHHHHHHhhCcCC------------ceEEEEeCCCCceecc
Q 044391 397 MPWYTVQHPTIIEPAVVKYAKEVWKFSK------------KAILVPVDPQGRILNQ 440 (691)
Q Consensus 397 MPWyAVp~~d~i~~~~~r~ike~f~~~~------------iP~LVvL~pqGkv~~~ 440 (691)
++|-.+.-++ . .+.+.|++.. .|..+++||+|+++..
T Consensus 108 ~~f~~l~D~~---~----~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~ 156 (179)
T 3ixr_A 108 FTFPLVSDSD---A----ILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEA 156 (179)
T ss_dssp CCSCEEECTT---C----HHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEE
T ss_pred CceEEEECCc---h----HHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEE
Confidence 4544433222 2 3445577743 6899999999999864
No 59
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.38 E-value=4.4e-07 Score=85.38 Aligned_cols=97 Identities=15% Similarity=0.017 Sum_probs=68.2
Q ss_pred ceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeee
Q 044391 325 TRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYT 401 (691)
Q Consensus 325 ~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyA 401 (691)
+.+.++.++||.|+|+|-+.||++|. ++.|. +|++ +++||.|++-| +.+.-++|-+- ...||..
T Consensus 49 ~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-------~v~vv~vs~~d-----~~~~~~~~~~~-~~~~~~~ 115 (176)
T 3kh7_A 49 RRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ-------GVVIYGINYKD-----DNAAAIKWLNE-LHNPYLL 115 (176)
T ss_dssp SEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-------TCEEEEEEESC-----CHHHHHHHHHH-TTCCCSE
T ss_pred ceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC-------CCEEEEEeCCC-----CHHHHHHHHHH-cCCCCce
Confidence 67999999999999999999998874 46677 7765 49999998722 23333444332 2344443
Q ss_pred ecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 402 VQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 402 Vp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
+-... ...+.+.|++.+.|..+++|++|+++..
T Consensus 116 ~~~d~------~~~~~~~~~v~~~P~~~lid~~G~i~~~ 148 (176)
T 3kh7_A 116 SISDA------DGTLGLDLGVYGAPETYLIDKQGIIRHK 148 (176)
T ss_dssp EEEET------TCHHHHHHTCCSSCEEEEECTTCBEEEE
T ss_pred EEECC------cchHHHHcCCCCCCeEEEECCCCeEEEE
Confidence 22211 1244566899999999999999999853
No 60
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.37 E-value=1.2e-06 Score=86.13 Aligned_cols=104 Identities=13% Similarity=0.093 Sum_probs=76.7
Q ss_pred CCCCceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh-c
Q 044391 321 GSSRTRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ-A 395 (691)
Q Consensus 321 g~~~~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~-~ 395 (691)
+.++..|.+++++||.|+|+|- +.||++| +++.|. +|++++. .+++||.|++ | +.++.++|-+-. .
T Consensus 43 ~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~---~~v~vv~Is~-D-----~~~~~~~~~~~~~~ 113 (220)
T 1zye_A 43 SGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHD---VNCEVVAVSV-D-----SHFSHLAWINTPRK 113 (220)
T ss_dssp SSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHH---TTEEEEEEES-S-----CHHHHHHHHTSCGG
T ss_pred CCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH---CCCEEEEEEC-C-----CHHHHHHHHHHHHH
Confidence 4567889999999999999999 9999776 567799 9999874 3699999986 3 233445554322 1
Q ss_pred -----CCCeeeecCCCCCchHHHHHHHHhhCcC------CceEEEEeCCCCceecc
Q 044391 396 -----MMPWYTVQHPTIIEPAVVKYAKEVWKFS------KKAILVPVDPQGRILNQ 440 (691)
Q Consensus 396 -----~MPWyAVp~~d~i~~~~~r~ike~f~~~------~iP~LVvL~pqGkv~~~ 440 (691)
.++|..+.-+ .+.+.+.|++. ..|.++++|++|+++..
T Consensus 114 ~~g~~~~~fp~l~D~-------~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~ 162 (220)
T 1zye_A 114 NGGLGHMNIALLSDL-------TKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHL 162 (220)
T ss_dssp GTCCCSCSSEEEECT-------TSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred hCCCcCCceEEEECC-------cHHHHHHhCCeecCCCcccceEEEECCCCEEEEE
Confidence 4455433322 13455668998 99999999999999865
No 61
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.37 E-value=1.6e-06 Score=86.91 Aligned_cols=102 Identities=13% Similarity=0.057 Sum_probs=75.5
Q ss_pred CCceeecceecCcEEEEEEec-CCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh----
Q 044391 323 SRTRVNIEVLRRKHVLLLISS-LDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ---- 394 (691)
Q Consensus 323 ~~~kV~Is~L~gK~VlL~fSa-l~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~---- 394 (691)
+++.|++++++||.|+|+|-+ .||++| +++-|. +|+++++ .+++||.||. | +.+..+.|-+-.
T Consensus 66 ~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~---~gv~vv~Is~-D-----~~~~~~~~~~~~~~~~ 136 (240)
T 3qpm_A 66 EFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRA---INTEVVACSV-D-----SQFTHLAWIITPRKQG 136 (240)
T ss_dssp EEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHT---TTEEEEEEES-S-----CHHHHHHHHHSCGGGT
T ss_pred CCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHH---CCCEEEEEEC-C-----CHHHHHHHHHHHHhhc
Confidence 355899999999999999988 889776 567799 9999984 4699999995 4 244555665432
Q ss_pred --cCCCeeeecCCCCCchHHHHHHHHhhCcC------CceEEEEeCCCCceecc
Q 044391 395 --AMMPWYTVQHPTIIEPAVVKYAKEVWKFS------KKAILVPVDPQGRILNQ 440 (691)
Q Consensus 395 --~~MPWyAVp~~d~i~~~~~r~ike~f~~~------~iP~LVvL~pqGkv~~~ 440 (691)
..+||..+.-++ +.+.+.|++. ..|..+++||+|+++..
T Consensus 137 ~~~~~~fp~l~D~~-------~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~ 183 (240)
T 3qpm_A 137 GLGPMKIPLLSDLT-------HQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQI 183 (240)
T ss_dssp CCCSCSSCEEECTT-------SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CCCCCceeEEeCch-------HHHHHHhCCccccCCCccceEEEEcCCCeEEEE
Confidence 145655443332 2455568886 58999999999999865
No 62
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.35 E-value=1.6e-06 Score=78.04 Aligned_cols=106 Identities=10% Similarity=0.022 Sum_probs=76.8
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+...+|+.+.+++++ |.|+|+|.+.||++| +.+.|. +|+++ ++++|.|++ | .+.+.+....+..
T Consensus 16 l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~------~v~~v~v~~-d-----~~~~~~~~~~~~~ 82 (154)
T 3ia1_A 16 LLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET------GVPFYVISR-E-----PRDTREVVLEYMK 82 (154)
T ss_dssp EECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH------CCCEEEEEC-C-----TTCCHHHHHHHHT
T ss_pred EECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc------CCeEEEEeC-C-----CcccHHHHHHHHH
Confidence 344567789999999 999999999999877 446788 88887 489999986 2 1334445555554
Q ss_pred CC--CeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceeccc
Q 044391 396 MM--PWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQN 441 (691)
Q Consensus 396 ~M--PWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~N 441 (691)
.. +|..+..+. .....+.+.|++.+.|+++++|++|+++...
T Consensus 83 ~~~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 126 (154)
T 3ia1_A 83 TYPRFIPLLASDR----DRPHEVAARFKVLGQPWTFVVDREGKVVALF 126 (154)
T ss_dssp TCTTEEECBCCSS----CCHHHHHTTSSBCSSCEEEEECTTSEEEEEE
T ss_pred HcCCCcccccccc----cchHHHHHHhCCCcccEEEEECCCCCEEEEE
Confidence 44 443333211 1345677889999999999999999988643
No 63
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.34 E-value=8.6e-07 Score=84.72 Aligned_cols=100 Identities=12% Similarity=0.076 Sum_probs=74.1
Q ss_pred ceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc-----
Q 044391 325 TRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA----- 395 (691)
Q Consensus 325 ~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~----- 395 (691)
+.+.+++++||.|+|+|- +.||++| +++.|. +|++++. .+++||.|++ | +.++.++|-+-+.
T Consensus 25 ~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~---~~v~vv~Is~-d-----~~~~~~~~~~~~~~~~~~ 95 (197)
T 1qmv_A 25 KEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRK---LGCEVLGVSV-D-----SQFTHLAWINTPRKEGGL 95 (197)
T ss_dssp EEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT---TTEEEEEEES-S-----CHHHHHHHHTSCGGGTCC
T ss_pred cEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH---CCCEEEEEEC-C-----CHHHHHHHHHHHHhhCCC
Confidence 789999999999999999 9999887 457799 9999874 4699999986 4 1334455544331
Q ss_pred -CCCeeeecCCCCCchHHHHHHHHhhCcC------CceEEEEeCCCCceecc
Q 044391 396 -MMPWYTVQHPTIIEPAVVKYAKEVWKFS------KKAILVPVDPQGRILNQ 440 (691)
Q Consensus 396 -~MPWyAVp~~d~i~~~~~r~ike~f~~~------~iP~LVvL~pqGkv~~~ 440 (691)
.++|..+.-++ +.+.+.|++. ..|..+++|++|+++..
T Consensus 96 ~~~~~p~l~D~~-------~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~ 140 (197)
T 1qmv_A 96 GPLNIPLLADVT-------RRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQI 140 (197)
T ss_dssp CSCSSCEEECTT-------CHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CCCceEEEECCc-------HHHHHHcCCccCCCCceeeEEEEECCCCcEEEE
Confidence 45554333221 2355668988 79999999999999865
No 64
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.34 E-value=2.1e-06 Score=82.52 Aligned_cols=100 Identities=14% Similarity=0.115 Sum_probs=74.6
Q ss_pred ceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc-----
Q 044391 325 TRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA----- 395 (691)
Q Consensus 325 ~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~----- 395 (691)
+.+.+++++||.|+|+|- +.||++| +++.|. +|+++++ .+++||.|++ | +.+..++|-+-+.
T Consensus 27 ~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~---~~v~vi~Is~-D-----~~~~~~~~~~~~~~~~~~ 97 (202)
T 1uul_A 27 KKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSD---IGCEVLACSM-D-----SEYSHLAWTSIERKRGGL 97 (202)
T ss_dssp EEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHT---TTEEEEEEES-S-----CHHHHHHHHHSCGGGTCC
T ss_pred cEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH---CCCEEEEEeC-C-----CHHHHHHHHHHHHhhCCC
Confidence 689999999999999999 9999887 467799 9999873 4699999986 4 2344455554331
Q ss_pred -CCCeeeecCCCCCchHHHHHHHHhhCcC------CceEEEEeCCCCceecc
Q 044391 396 -MMPWYTVQHPTIIEPAVVKYAKEVWKFS------KKAILVPVDPQGRILNQ 440 (691)
Q Consensus 396 -~MPWyAVp~~d~i~~~~~r~ike~f~~~------~iP~LVvL~pqGkv~~~ 440 (691)
.++|..+.-++ +.+.+.|++. ..|..+++|++|+++..
T Consensus 98 ~~~~~p~l~D~~-------~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~ 142 (202)
T 1uul_A 98 GQMNIPILADKT-------KCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQI 142 (202)
T ss_dssp CSCSSCEEECTT-------CHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CCCceeEEECCc-------hHHHHHcCCccCCCCceeeEEEEECCCCEEEEE
Confidence 44554433221 2445568998 99999999999999875
No 65
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.34 E-value=1.5e-06 Score=86.11 Aligned_cols=103 Identities=13% Similarity=0.121 Sum_probs=75.6
Q ss_pred CC--ceeeccee-cCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 323 SR--TRVNIEVL-RRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 323 ~~--~kV~Is~L-~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+| +.|+++++ +||.|+|+|- +.||++| +++.|. +|+++++ .+++||.|++ | +.+..+.|-+-+.
T Consensus 42 ~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~---~~v~vv~Is~-D-----~~~~~~~~~~~~~ 112 (221)
T 2c0d_A 42 NNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFEN---KNVELLGISV-D-----SVYSHLAWKNMPI 112 (221)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHH---TTEEEEEEES-S-----CHHHHHHHHHSCG
T ss_pred CCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHH---CCCEEEEEeC-C-----CHHHHHHHHHHhh
Confidence 56 78999999 9999999999 9999765 567799 9999974 4699999996 4 2445566755442
Q ss_pred ------CCCeeeecCCCCCchHHHHHHHHhhCc-----CCceEEEEeCCCCceeccc
Q 044391 396 ------MMPWYTVQHPTIIEPAVVKYAKEVWKF-----SKKAILVPVDPQGRILNQN 441 (691)
Q Consensus 396 ------~MPWyAVp~~d~i~~~~~r~ike~f~~-----~~iP~LVvL~pqGkv~~~N 441 (691)
.++|-.+.-++ ..+.+.|++ ...|..++||++|+++...
T Consensus 113 ~~~g~~~~~fp~l~D~~-------~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~ 162 (221)
T 2c0d_A 113 EKGGIGNVEFTLVSDIN-------KDISKNYNVLYDNSFALRGLFIIDKNGCVRHQT 162 (221)
T ss_dssp GGTCCCSCSSEEEECTT-------SHHHHHTTCEETTTEECEEEEEECTTSBEEEEE
T ss_pred hhcCccCCceEEEECCc-------hHHHHHcCCcccCCCccceEEEECCCCeEEEEE
Confidence 44554332221 234456888 3689999999999998653
No 66
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.34 E-value=1.5e-06 Score=85.14 Aligned_cols=102 Identities=15% Similarity=0.104 Sum_probs=77.0
Q ss_pred CC--ceeeccee-cCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 323 SR--TRVNIEVL-RRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 323 ~~--~kV~Is~L-~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+| +.|.++++ +||.|+|+|- +.||++| +++.|. +|+++++ .+++||.|++ | +.+..++|-+-..
T Consensus 38 ~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~---~~v~vv~Is~-D-----~~~~~~~~~~~~~ 108 (213)
T 2i81_A 38 DNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHE---RNVELLGCSV-D-----SKYTHLAWKKTPL 108 (213)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHH---TTEEEEEEES-S-----CHHHHHHHHSSCG
T ss_pred CCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHH---CCCEEEEEeC-C-----CHHHHHHHHHHHH
Confidence 56 78999999 9999999999 9999877 557799 9999874 4699999986 3 2344455654332
Q ss_pred ------CCCeeeecCCCCCchHHHHHHHHhhCcC-----CceEEEEeCCCCceecc
Q 044391 396 ------MMPWYTVQHPTIIEPAVVKYAKEVWKFS-----KKAILVPVDPQGRILNQ 440 (691)
Q Consensus 396 ------~MPWyAVp~~d~i~~~~~r~ike~f~~~-----~iP~LVvL~pqGkv~~~ 440 (691)
.+||..+--++ +.+.+.|++. ..|..+++|++|+++..
T Consensus 109 ~~~g~~~~~fp~l~D~~-------~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~ 157 (213)
T 2i81_A 109 AKGGIGNIKHTLLSDIT-------KSISKDYNVLFDDSVSLRAFVLIDMNGIVQHL 157 (213)
T ss_dssp GGTCCCSCSSEEEECTT-------SHHHHHTTCEETTTEECEEEEEECTTSBEEEE
T ss_pred hhCCccCCCceEEECCc-------hHHHHHhCCccccCCcccEEEEECCCCEEEEE
Confidence 56765543322 3455668998 89999999999999865
No 67
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.31 E-value=1.8e-06 Score=77.55 Aligned_cols=98 Identities=14% Similarity=0.091 Sum_probs=69.4
Q ss_pred ceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeee
Q 044391 325 TRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYT 401 (691)
Q Consensus 325 ~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyA 401 (691)
+.+.+++++||.++|+|.+.||++|. .+.|. +|++ .++++|.|++-+ +.+..++|-.-+ .++|..
T Consensus 33 ~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~------~~v~~v~v~~~~-----~~~~~~~~~~~~-~~~~~~ 100 (156)
T 1kng_A 33 PGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD------KRFQLVGINYKD-----AADNARRFLGRY-GNPFGR 100 (156)
T ss_dssp CCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC------TTSEEEEEEESC-----CHHHHHHHHHHH-CCCCSE
T ss_pred ceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc------CCeEEEEEECCC-----CHHHHHHHHHHc-CCCCce
Confidence 67999999999999999999998874 35566 5543 469999998622 233445554332 456653
Q ss_pred ecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 402 VQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 402 Vp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
+-... ...+.+.|++.+.|+.+++|++|+++..
T Consensus 101 ~~~d~------~~~~~~~~~v~~~P~~~~id~~G~i~~~ 133 (156)
T 1kng_A 101 VGVDA------NGRASIEWGVYGVPETFVVGREGTIVYK 133 (156)
T ss_dssp EEEET------TSHHHHHTTCCSSCEEEEECTTSBEEEE
T ss_pred eeeCc------hhHHHHhcCcCccCeEEEEcCCCCEEEE
Confidence 33321 1245567999999999999999998763
No 68
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.30 E-value=4.4e-06 Score=80.72 Aligned_cols=149 Identities=11% Similarity=0.107 Sum_probs=94.2
Q ss_pred ecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCC
Q 044391 332 LRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTII 408 (691)
Q Consensus 332 L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i 408 (691)
.+||.|+++|.+.||++|. .+.|. ++++++.+ +.++.++-|-. |.+
T Consensus 30 ~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~~~~vd~--------~~~---------------------- 78 (241)
T 3idv_A 30 ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDK-DPPIPVAKIDA--------TSA---------------------- 78 (241)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTS-SSCCCEEEEET--------TTC----------------------
T ss_pred hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhc-CCceEEEEEec--------cCC----------------------
Confidence 3589999999999998874 47788 99998754 44466665532 211
Q ss_pred chHHHHHHHHhhCcCCceEEEEeCCCCceecccHHHHHHHhCcccccCChhhHHHHHhhh---ccch--hhhcccCchhh
Q 044391 409 EPAVVKYAKEVWKFSKKAILVPVDPQGRILNQNAFHMLWIWGNLAFPFSAEKEAALWKAE---SWRL--ELLIDDIDATI 483 (691)
Q Consensus 409 ~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~NA~~mI~~wG~~AFPFT~~r~e~L~~~e---~w~l--elLvd~id~~I 483 (691)
+.+.+.|++++.|++++++ +|+.+... | +.+.+.+.+.-++. .|.. ..+..-.+..+
T Consensus 79 -----~~l~~~~~v~~~Pt~~~~~-~g~~~~~~--------g----~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~ 140 (241)
T 3idv_A 79 -----SVLASRFDVSGYPTIKILK-KGQAVDYE--------G----SRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENF 140 (241)
T ss_dssp -----HHHHHHTTCCSSSEEEEEE-TTEEEECC--------S----CSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTH
T ss_pred -----HHHHHhcCCCcCCEEEEEc-CCCccccc--------C----cccHHHHHHHHhhccCcccccccccceeccHHHH
Confidence 1356779999999999996 57665322 2 23333333322221 1211 11111112234
Q ss_pred hhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh---CCceeeEEecccC
Q 044391 484 LEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA---QINLGMAYVGKNN 531 (691)
Q Consensus 484 ~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a---~~~~E~v~Vgkdn 531 (691)
...++.++.++++|.+ .|| +.+.+.+.++++.. +..+.++.|.-+.
T Consensus 141 ~~~~~~~~~~~v~f~a--~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~ 192 (241)
T 3idv_A 141 DEVVNDADIILVEFYA--PWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA 192 (241)
T ss_dssp HHHHHHCSEEEEEEEC--TTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT
T ss_pred HHhhccCCeEEEEEEC--CCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC
Confidence 4557789999999999 665 99999998887763 2347777776553
No 69
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.29 E-value=2.2e-06 Score=83.88 Aligned_cols=103 Identities=11% Similarity=0.040 Sum_probs=74.5
Q ss_pred CCceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc---
Q 044391 323 SRTRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA--- 395 (691)
Q Consensus 323 ~~~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~--- 395 (691)
+++.|.+++++||.|+|+|- +.||++| +++.|. +|+++++ .+++||.|++ | +.+..+.|-+-+.
T Consensus 37 ~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~---~~v~vv~Is~-D-----~~~~~~~~~~~~~~~~ 107 (211)
T 2pn8_A 37 EFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS---INTEVVACSV-D-----SQFTHLAWINTPRRQG 107 (211)
T ss_dssp EEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT---TTEEEEEEES-S-----CHHHHHHHHTSCGGGT
T ss_pred CCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH---CCCEEEEEEC-C-----CHHHHHHHHHHhhhcc
Confidence 34689999999999999998 9999876 567799 9999974 4699999996 4 2344455654331
Q ss_pred ---CCCeeeecCCCCCchHHHHHHHHhhCcC------CceEEEEeCCCCceeccc
Q 044391 396 ---MMPWYTVQHPTIIEPAVVKYAKEVWKFS------KKAILVPVDPQGRILNQN 441 (691)
Q Consensus 396 ---~MPWyAVp~~d~i~~~~~r~ike~f~~~------~iP~LVvL~pqGkv~~~N 441 (691)
.++|-.+.-++ +.+.+.|++. ..|..+++|++|+++...
T Consensus 108 g~~~~~fp~l~D~~-------~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~ 155 (211)
T 2pn8_A 108 GLGPIRIPLLSDLT-------HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQIT 155 (211)
T ss_dssp CCCSCSSCEEECTT-------SHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred CccCCceEEEECCc-------hHHHHHcCCcccCCCcccceEEEECCCCEEEEEE
Confidence 34443332211 2345568884 599999999999998653
No 70
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.28 E-value=3.8e-06 Score=79.18 Aligned_cols=114 Identities=13% Similarity=0.151 Sum_probs=72.2
Q ss_pred ecCCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccC-CCCC-ChhhHHHHHH-
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDR-SIAW-DEGYRQKFEQ- 392 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~-s~~W-~D~d~~~F~~- 392 (691)
+...+|+.+.+++++||.|+|+|.+.||++| +++.|. +|++++.+ +++||.|++-+. ..+- +.+..++|-+
T Consensus 34 l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~---~v~vv~vs~d~~~~~e~~~~~~~~~~~~~ 110 (181)
T 2p31_A 34 AVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH---HFNVLAFPCNQFGQQEPDSNKEIESFARR 110 (181)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---TEEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred eecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC---CEEEEEEECcCCCCCCCCCHHHHHHHHHh
Confidence 3345677899999999999999999999887 567899 99999743 599999986210 0000 2333445543
Q ss_pred -HhcCCCeeee-cCCCCCchHHHHHHHHhhCcCCce-------EEEEeCCCCceecc
Q 044391 393 -LQAMMPWYTV-QHPTIIEPAVVKYAKEVWKFSKKA-------ILVPVDPQGRILNQ 440 (691)
Q Consensus 393 -~~~~MPWyAV-p~~d~i~~~~~r~ike~f~~~~iP-------~LVvL~pqGkv~~~ 440 (691)
+.-..|.++- ........+..++ .+.+.| +.+++|++|+++..
T Consensus 111 ~~~~~~p~~~~~d~~g~~~~~~~~~-----~~~~~P~~~~~~~~~~lid~~G~i~~~ 162 (181)
T 2p31_A 111 TYSVSFPMFSKIAVTGTGAHPAFKY-----LAQTSGKEPTWNFWKYLVAPDGKVVGA 162 (181)
T ss_dssp HHCCCSCBBCCCCCSSTTSCHHHHH-----HHHHHSCCCCSTTCEEEECTTSCEEEE
T ss_pred hcCCCceeEeecccCCccchhhhhh-----hhhcCCCccccceeEEEEcCCCCEEEE
Confidence 3333443331 1111001112233 234567 89999999999864
No 71
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.27 E-value=3.5e-06 Score=82.37 Aligned_cols=115 Identities=12% Similarity=0.061 Sum_probs=76.6
Q ss_pred CC-CceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccC---CCCCChhhHHHHHHH-
Q 044391 322 SS-RTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDR---SIAWDEGYRQKFEQL- 393 (691)
Q Consensus 322 ~~-~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~---s~~W~D~d~~~F~~~- 393 (691)
.+ |+.|.+++++||.|+|+|-+.||++| +++.|+ +|++.+.+ +++||-||+ |. ..+-+.++.++|-.+
T Consensus 34 ~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~---g~~vv~v~~-d~~~~~e~d~~~~i~~f~~~~ 109 (208)
T 2f8a_A 34 LAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR---GLVVLGFPC-NQFGHQENAKNEEILNSLKYV 109 (208)
T ss_dssp TTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---TEEEEEEEC-CCSTTTTCSCHHHHHHHHHHT
T ss_pred CCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC---CeEEEEEEC-CcccccCCCCHHHHHHHHHhc
Confidence 44 77899999999999999999999887 468899 99998743 599999996 20 001123444566542
Q ss_pred ----hcCCCeeeecCCC---CCchHHHHHHHHhhC-------------------------cCCceEEEEeCCCCceecc
Q 044391 394 ----QAMMPWYTVQHPT---IIEPAVVKYAKEVWK-------------------------FSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 394 ----~~~MPWyAVp~~d---~i~~~~~r~ike~f~-------------------------~~~iP~LVvL~pqGkv~~~ 440 (691)
....++-.+.-.+ ....+..+++++.+. ++..|+.+++|++|+++..
T Consensus 110 ~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~ 188 (208)
T 2f8a_A 110 RPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRR 188 (208)
T ss_dssp SSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred ccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEE
Confidence 2233322221001 001246677776543 4556999999999999865
No 72
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.60 E-value=1e-07 Score=86.76 Aligned_cols=104 Identities=16% Similarity=0.184 Sum_probs=68.2
Q ss_pred CCCceeecceecCcEEEEEEecCCCChhh--hHHHH--HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCC
Q 044391 322 SSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH--LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMM 397 (691)
Q Consensus 322 ~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~--iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~M 397 (691)
.+|+.+.+++++||.|+|+|.+.||++|. .+.|. +|++.+. +.++++|.|++ |.+.+....+...+
T Consensus 21 ~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~--~~~~~vv~v~~--------d~~~~~~~~~~~~~ 90 (159)
T 2ls5_A 21 TDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKD--NADFALIGIDR--------DEPLEKVLAFAKST 90 (159)
Confidence 45678999999999999999999998874 34444 5555541 35799999986 22222233333332
Q ss_pred CeeeecCCCCCchHHHHHHHHhhC--cCCceEEEEeCCCCceecc
Q 044391 398 PWYTVQHPTIIEPAVVKYAKEVWK--FSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 398 PWyAVp~~d~i~~~~~r~ike~f~--~~~iP~LVvL~pqGkv~~~ 440 (691)
.+ +|+-..+. ...+.+.|+ +.+.|+++++|++|+++..
T Consensus 91 ~~---~~~~~~d~--~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 130 (159)
T 2ls5_A 91 GV---TYPLGLDP--GADIFAKYALRDAGITRNVLIDREGKIVKL 130 (159)
Confidence 22 23322222 234566788 5679999999999998854
No 73
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.26 E-value=6.5e-07 Score=84.25 Aligned_cols=108 Identities=8% Similarity=-0.010 Sum_probs=74.6
Q ss_pred CCCCceeecceecCcE-EEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCC---CChhhHHHHHHH
Q 044391 321 GSSRTRVNIEVLRRKH-VLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIA---WDEGYRQKFEQL 393 (691)
Q Consensus 321 g~~~~kV~Is~L~gK~-VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~---W~D~d~~~F~~~ 393 (691)
..+|+.+.+++++||. |+|+|.+.||++| +++.|. +|++.+.+ +++||.|++ |.... -+.+..+.|-.-
T Consensus 32 ~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---~v~vv~v~~-d~~~~~~~d~~~~~~~~~~~ 107 (196)
T 2ywi_A 32 VIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPK---GVSFVAINS-NDAEQYPEDSPENMKKVAEE 107 (196)
T ss_dssp TTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG---TCEEEEEEC-SCTTTCGGGSHHHHHHHHHH
T ss_pred cCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC---CcEEEEEEC-CccccccccCHHHHHHHHHH
Confidence 5678889999999995 9999999999776 457799 99998743 599999986 21000 123333445332
Q ss_pred hcCCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 394 QAMMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 394 ~~~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
+ ..+|-.+.-++ . .+.+.|++.+.|+++++|++|+++..
T Consensus 108 ~-~~~~~~~~d~~---~----~~~~~~~v~~~P~~~lid~~G~i~~~ 146 (196)
T 2ywi_A 108 L-GYPFPYLYDET---Q----EVAKAYDAACTPDFYIFDRDLKCVYR 146 (196)
T ss_dssp H-TCCSCEEECSS---C----HHHHHHTCCEESEEEEEETTCBEEEE
T ss_pred c-CCCceEEECCc---h----HHHHHhCCCCCCeEEEEcCCCeEEEc
Confidence 2 23333222211 2 34456899999999999999999865
No 74
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.20 E-value=4.5e-06 Score=76.59 Aligned_cols=99 Identities=15% Similarity=0.006 Sum_probs=69.2
Q ss_pred CCceeeccee-cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCC
Q 044391 323 SRTRVNIEVL-RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMP 398 (691)
Q Consensus 323 ~~~kV~Is~L-~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MP 398 (691)
+|..+..+.+ +||.|+|+|.+.||++|. .+.|. ++++ ++++|.|++-+ +.+...+|-.-+ ..|
T Consensus 39 ~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-------~v~vv~v~~~~-----~~~~~~~~~~~~-~~~ 105 (168)
T 2b1k_A 39 PGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-------GIRVVGMNYKD-----DRQKAISWLKEL-GNP 105 (168)
T ss_dssp TTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-------TCCEEEEEESC-----CHHHHHHHHHHH-CCC
T ss_pred CCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-------CCEEEEEECCC-----ChHHHHHHHHHc-CCC
Confidence 5677888885 999999999999998874 45566 6653 59999998722 233445554432 456
Q ss_pred eeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 399 WYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 399 WyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
|..+-... ...+.+.|++.+.|+.+++|++|+++..
T Consensus 106 ~~~~~~d~------~~~~~~~~~v~~~P~~~lid~~G~i~~~ 141 (168)
T 2b1k_A 106 YALSLFDG------DGMLGLDLGVYGAPETFLIDGNGIIRYR 141 (168)
T ss_dssp CSEEEEET------TCHHHHHHTCCSSSEEEEECTTSBEEEE
T ss_pred CceeeECc------chHHHHHcCccccCEEEEECCCCeEEEE
Confidence 54322211 1235567899999999999999999853
No 75
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.20 E-value=5.3e-06 Score=79.11 Aligned_cols=101 Identities=14% Similarity=0.109 Sum_probs=73.3
Q ss_pred ceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc---CC
Q 044391 325 TRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA---MM 397 (691)
Q Consensus 325 ~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~---~M 397 (691)
+.|.+++++||.|+|+|= +.||++| +++.|. +|+++++ .+++||.|+. | +.+..+.|-+-+. .+
T Consensus 21 ~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~---~~v~vv~Is~-d-----~~~~~~~~~~~~~~~~~~ 91 (186)
T 1n8j_A 21 IEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQK---LGVDVYSVST-D-----THFTHKAWHSSSETIAKI 91 (186)
T ss_dssp EEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHH---TTEEEEEEES-S-----CHHHHHHHHHHCTTGGGC
T ss_pred eEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHH---CCCEEEEEEC-C-----CHHHHHHHHHHcCcccCC
Confidence 689999999999999985 5899776 567799 9999974 4699999995 4 2444566765442 45
Q ss_pred CeeeecCCCCCchHHHHHHHHhhCcC------CceEEEEeCCCCceeccc
Q 044391 398 PWYTVQHPTIIEPAVVKYAKEVWKFS------KKAILVPVDPQGRILNQN 441 (691)
Q Consensus 398 PWyAVp~~d~i~~~~~r~ike~f~~~------~iP~LVvL~pqGkv~~~N 441 (691)
+|..+.-++ .+ +.+.|++. ..|..+++|++|+++...
T Consensus 92 ~fp~l~D~~---~~----~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~ 134 (186)
T 1n8j_A 92 KYAMIGDPT---GA----LTRNFDNMREDEGLADRATFVVDPQGIIQAIE 134 (186)
T ss_dssp CSEEEECTT---SH----HHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred ceeEEECCc---hH----HHHHhCCccCCCCceeeEEEEECCCCeEEEEE
Confidence 554443222 22 44557876 369999999999998653
No 76
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.19 E-value=8.7e-06 Score=75.27 Aligned_cols=105 Identities=7% Similarity=0.001 Sum_probs=73.9
Q ss_pred eecCCCCceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHH
Q 044391 318 VVDGSSRTRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQL 393 (691)
Q Consensus 318 l~~g~~~~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~ 393 (691)
-+...+|+.|++++++||.|+|+|= +.||++| +++.|. +|+++ .+++||.|+. | +.+..++|-+-
T Consensus 26 ~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-----~~v~vv~is~-d-----~~~~~~~~~~~ 94 (163)
T 1psq_A 26 SLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-----DNTVVLTVSM-D-----LPFAQKRWCGA 94 (163)
T ss_dssp EEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-----TTEEEEEEES-S-----CHHHHHHHHHH
T ss_pred EEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-----CCcEEEEEEC-C-----CHHHHHHHHHh
Confidence 3445678899999999999999996 5899766 556788 88877 4599999996 4 24455667554
Q ss_pred hcCC-CeeeecC-CCCCchHHHHHHHHhhCcC----Cc--eEEEEeCCCCceeccc
Q 044391 394 QAMM-PWYTVQH-PTIIEPAVVKYAKEVWKFS----KK--AILVPVDPQGRILNQN 441 (691)
Q Consensus 394 ~~~M-PWyAVp~-~d~i~~~~~r~ike~f~~~----~i--P~LVvL~pqGkv~~~N 441 (691)
+ .. +|..+.- ++ . .+.+.|++. +. |..+++|++|+++...
T Consensus 95 ~-~~~~~~~l~D~~~---~----~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~ 142 (163)
T 1psq_A 95 E-GLDNAIMLSDYFD---H----SFGRDYALLINEWHLLARAVFVLDTDNTIRYVE 142 (163)
T ss_dssp H-TCTTSEEEECTTT---C----HHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEE
T ss_pred c-CCCCcEEecCCch---h----HHHHHhCCccccCCceEEEEEEEcCCCeEEEEE
Confidence 3 34 4433322 21 2 344557876 43 9999999999998654
No 77
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.18 E-value=1e-06 Score=81.14 Aligned_cols=105 Identities=10% Similarity=0.000 Sum_probs=72.5
Q ss_pred eecCCCCceeecceecCcEEEEEEecCC-CChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHH
Q 044391 318 VVDGSSRTRVNIEVLRRKHVLLLISSLD-LSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQL 393 (691)
Q Consensus 318 l~~g~~~~kV~Is~L~gK~VlL~fSal~-~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~ 393 (691)
-+...+|+.+++++++||.|+|+|-+.| |++| +++.|. +|+++ .+++||.|++ | +.+..++|-+-
T Consensus 28 ~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-----~~~~vv~is~-d-----~~~~~~~~~~~ 96 (167)
T 2jsy_A 28 TVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-----GDVNVYTISA-D-----LPFAQARWCGA 96 (167)
T ss_dssp EEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-----SSCEEEEEEC-S-----SGGGTSCCGGG
T ss_pred EEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-----CCCEEEEEEC-C-----CHHHHHHHHHh
Confidence 3345677889999999999999999999 8776 457799 99988 3599999986 3 12222333332
Q ss_pred hcCC-CeeeecC-CCCCchHHHHHHHHhhCcCCc------eEEEEeCCCCceeccc
Q 044391 394 QAMM-PWYTVQH-PTIIEPAVVKYAKEVWKFSKK------AILVPVDPQGRILNQN 441 (691)
Q Consensus 394 ~~~M-PWyAVp~-~d~i~~~~~r~ike~f~~~~i------P~LVvL~pqGkv~~~N 441 (691)
+ .+ +|..+.- ++ ..+.+.|++... |..+++|++|+++...
T Consensus 97 ~-~~~~~~~~~d~~~-------~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~ 144 (167)
T 2jsy_A 97 N-GIDKVETLSDHRD-------MSFGEAFGVYIKELRLLARSVFVLDENGKVVYAE 144 (167)
T ss_dssp S-SCTTEEEEEGGGT-------CHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEE
T ss_pred c-CCCCceEeeCCch-------hHHHHHhCCccccCCceeeEEEEEcCCCcEEEEE
Confidence 2 22 3433322 21 234456888763 9999999999998654
No 78
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.17 E-value=6.9e-06 Score=76.20 Aligned_cols=105 Identities=10% Similarity=0.036 Sum_probs=74.6
Q ss_pred ceecCCCCceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHH
Q 044391 317 PVVDGSSRTRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQ 392 (691)
Q Consensus 317 ~l~~g~~~~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~ 392 (691)
+-+...+|+.|++++++||.|+|+|= +.||++| +++.|. +|++ .+++||.||. | +.+..++|-+
T Consensus 29 f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~------~~~~vv~is~-d-----~~~~~~~~~~ 96 (166)
T 3p7x_A 29 FTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK------EEGIVLTISA-D-----LPFAQKRWCA 96 (166)
T ss_dssp CEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT------TTSEEEEEES-S-----CHHHHHHHHH
T ss_pred eEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc------CCCEEEEEEC-C-----CHHHHHHHHH
Confidence 34445677889999999998888886 7889776 556788 8877 4599999995 4 3556677765
Q ss_pred HhcCC-CeeeecCCCCCchHHHHHHHHhhCcCC------ceEEEEeCCCCceecc
Q 044391 393 LQAMM-PWYTVQHPTIIEPAVVKYAKEVWKFSK------KAILVPVDPQGRILNQ 440 (691)
Q Consensus 393 ~~~~M-PWyAVp~~d~i~~~~~r~ike~f~~~~------iP~LVvL~pqGkv~~~ 440 (691)
-+ .+ +|-.+--+. +. .+.+.|++.. .|..+++|++|+++..
T Consensus 97 ~~-~~~~~~~l~D~~--~~----~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~ 144 (166)
T 3p7x_A 97 SA-GLDNVITLSDHR--DL----SFGENYGVVMEELRLLARAVFVLDADNKVVYK 144 (166)
T ss_dssp HH-TCSSCEEEECTT--TC----HHHHHHTCEETTTTEECCEEEEECTTCBEEEE
T ss_pred Hc-CCCceEEccCCc--hh----HHHHHhCCccccCCceeeEEEEECCCCeEEEE
Confidence 44 34 444443320 11 3445578875 8999999999999865
No 79
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.17 E-value=2.1e-06 Score=91.38 Aligned_cols=109 Identities=12% Similarity=0.045 Sum_probs=74.4
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCC
Q 044391 321 GSSRTRVNIEVLRRKHVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMM 397 (691)
Q Consensus 321 g~~~~kV~Is~L~gK~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~M 397 (691)
..+|+.+.+++++||.|+|+|.+.||++| +++.|. +|++++. .+++||-|++-+...+=+.+.-++|-+-+ .+
T Consensus 69 d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~---~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~-~l 144 (352)
T 2hyx_A 69 TPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKD---SGLAVIGVHTPEYAFEKVPGNVAKGAANL-GI 144 (352)
T ss_dssp SGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG---GTEEEEEEECCSSGGGGCHHHHHHHHHHH-TC
T ss_pred CCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhc---CCeEEEEEECCcccccCCHHHHHHHHHHc-CC
Confidence 34667899999999999999999999877 457799 9999874 35999999851100000122334443322 34
Q ss_pred CeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 398 PWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 398 PWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
+|-.+--.+ ..+.+.|++.+.|+++++|++|+++..
T Consensus 145 ~fpv~~D~~-------~~l~~~ygV~~~Pt~~lID~~G~Iv~~ 180 (352)
T 2hyx_A 145 SYPIALDNN-------YATWTNYRNRYWPAEYLIDATGTVRHI 180 (352)
T ss_dssp CSCEEECTT-------SHHHHHTTCCEESEEEEECTTSBEEEE
T ss_pred CccEEeCCc-------HHHHHHcCCCccCEEEEEeCCCeEEEE
Confidence 443222211 235566999999999999999999875
No 80
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.16 E-value=1.3e-05 Score=79.49 Aligned_cols=118 Identities=14% Similarity=0.057 Sum_probs=77.1
Q ss_pred cCCC-CceeecceecCcEEEEEEecCCCChh-hhHHHH-HHHHhhccCCCCeeEEEEeccc--CCCCCChhhHHHHHH--
Q 044391 320 DGSS-RTRVNIEVLRRKHVLLLISSLDLSDE-EILVLH-LYREHKAREEFDYAIVWLPIVD--RSIAWDEGYRQKFEQ-- 392 (691)
Q Consensus 320 ~g~~-~~kV~Is~L~gK~VlL~fSal~~~~~-e~~~L~-iY~~lk~~~~~~fEIVwIpiVd--~s~~W~D~d~~~F~~-- 392 (691)
-..+ |+.|++++++||.|+|+|-+.||++| +++-|+ +|++.+.+ +++||-||.=+ ...+-+.++-++|-+
T Consensus 41 ~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~e~p~L~~l~~~~~~~---g~~Vlgvs~d~f~~~e~~~~~~i~~f~~~~ 117 (215)
T 2i3y_A 41 IALNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNALQEELKPY---GLVVLGFPCNQFGKQEPGDNKEILPGLKYV 117 (215)
T ss_dssp EBSSSSCEEEGGGGTTSEEEEEEECSSSGGGGGHHHHHHHHHHHGGG---TEEEEEEECCCSTTCCCSCHHHHHHHHHHT
T ss_pred eeCCCCCEEcHHHhCCCEEEEEEeCCCCCChHhHHHHHHHHHHhccC---CeEEEEEEccccCcCCCCCHHHHHHHHHhc
Confidence 3445 78899999999999999999999776 677899 99999743 59999999611 011223344566755
Q ss_pred -----HhcCCCeeeecCCC-CCchHHHHHHHHhhC---------------------cCCceEEEEeCCCCceecc
Q 044391 393 -----LQAMMPWYTVQHPT-IIEPAVVKYAKEVWK---------------------FSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 393 -----~~~~MPWyAVp~~d-~i~~~~~r~ike~f~---------------------~~~iP~LVvL~pqGkv~~~ 440 (691)
+.-+.|.++-.-.+ ....++.+++++... ++..|+-+++|++|+++..
T Consensus 118 ~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~ 192 (215)
T 2i3y_A 118 RPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMR 192 (215)
T ss_dssp SSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred cchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEE
Confidence 22234444321110 001245677765421 1223789999999999865
No 81
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.15 E-value=2.8e-06 Score=79.83 Aligned_cols=104 Identities=12% Similarity=0.054 Sum_probs=70.6
Q ss_pred eecCCCCceeecceecCcEEEEEEecCC-CChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHH
Q 044391 318 VVDGSSRTRVNIEVLRRKHVLLLISSLD-LSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQL 393 (691)
Q Consensus 318 l~~g~~~~kV~Is~L~gK~VlL~fSal~-~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~ 393 (691)
-+...+|+.+.+++++||.|+|+|-+.| |++| +++.|. +|++ .+++||.|++ | +....++|-+-
T Consensus 28 ~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~------~~v~vv~Is~-D-----~~~~~~~~~~~ 95 (175)
T 1xvq_A 28 TLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA------SGATVLCVSK-D-----LPFAQKRFCGA 95 (175)
T ss_dssp EEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH------TTCEEEEEES-S-----CHHHHTTCC--
T ss_pred EEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh------cCCEEEEEEC-C-----CHHHHHHHHHH
Confidence 3445677889999999999999999998 7655 567788 9987 3599999986 3 12222333221
Q ss_pred hcCC-CeeeecCCCCCchHHHHHHHHhhCcCCc---------eEEEEeCCCCceeccc
Q 044391 394 QAMM-PWYTVQHPTIIEPAVVKYAKEVWKFSKK---------AILVPVDPQGRILNQN 441 (691)
Q Consensus 394 ~~~M-PWyAVp~~d~i~~~~~r~ike~f~~~~i---------P~LVvL~pqGkv~~~N 441 (691)
+ .+ +|..+.-++ +.+.+.|++... |..+++|++|+++...
T Consensus 96 ~-~~~~~~~l~D~~-------~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~ 145 (175)
T 1xvq_A 96 E-GTENVMPASAFR-------DSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTE 145 (175)
T ss_dssp -----CEEEEECTT-------SSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEE
T ss_pred c-CCCCceEeeCCH-------HHHHHHhCCcccccccCCcccceEEEECCCCeEEEEE
Confidence 1 22 343332221 234556888877 9999999999998654
No 82
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.14 E-value=5e-06 Score=77.19 Aligned_cols=105 Identities=10% Similarity=0.190 Sum_probs=72.1
Q ss_pred ecCCCCceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ 394 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~ 394 (691)
+-..+|+.|++++++||.|+|+|= +.||++| +++-|. .|++.+ +.++++|-|+. | +.+..++|-+-
T Consensus 15 l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~---~~~~~~v~vs~-d-----~~~~~~~~~~~- 84 (157)
T 4g2e_A 15 LPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFN---QVNAVVLGISV-D-----PPFSNKAFKEH- 84 (157)
T ss_dssp EEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGG---GCSSEEEEEES-S-----CHHHHHHHHHH-
T ss_pred eECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhccccccccc---ccCceEeeecc-c-----chhHHHHHHHH-
Confidence 345677889999999999999986 9999876 556688 999886 44689999985 4 24555677653
Q ss_pred cCCCeeeecCCCCCchHHHHHHHHhhCcC-----------CceEEEEeCCCCceecc
Q 044391 395 AMMPWYTVQHPTIIEPAVVKYAKEVWKFS-----------KKAILVPVDPQGRILNQ 440 (691)
Q Consensus 395 ~~MPWyAVp~~d~i~~~~~r~ike~f~~~-----------~iP~LVvL~pqGkv~~~ 440 (691)
..+||-.+--++ .+ +.+.|++. ..|+..|+|++|+++..
T Consensus 85 ~~~~~p~l~D~~---~~----v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~ 134 (157)
T 4g2e_A 85 NKLNFTILSDYN---RE----VVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYK 134 (157)
T ss_dssp TTCCSEEEECTT---SH----HHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEE
T ss_pred cCCcEEEEEcCC---cH----HHHHcCCccccccCCCcceeeeeEEEECCCCEEEEE
Confidence 355655443222 22 34456653 36889999999999743
No 83
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.14 E-value=7.1e-06 Score=83.28 Aligned_cols=103 Identities=11% Similarity=0.044 Sum_probs=74.3
Q ss_pred CCCceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh---
Q 044391 322 SSRTRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ--- 394 (691)
Q Consensus 322 ~~~~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~--- 394 (691)
.+++.|.+++++||.|+|+|= +.||++| +++-|. +|+++++ .+++||.|+. | +.++...|-+-.
T Consensus 79 ~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~---~gv~vv~IS~-D-----~~~~~~~~~~~~~~~ 149 (254)
T 3tjj_A 79 GEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS---INTEVVACSV-D-----SQFTHLAWINTPRRQ 149 (254)
T ss_dssp TEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHT---TTEEEEEEES-S-----CHHHHHHHHTSCGGG
T ss_pred CCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH---cCCEEEEEcC-C-----CHHHHHHHHHHHHHh
Confidence 356689999999999999886 8898665 667799 9999984 4699999995 4 244555665432
Q ss_pred ---cCCCeeeecCCCCCchHHHHHHHHhhCcC------CceEEEEeCCCCceecc
Q 044391 395 ---AMMPWYTVQHPTIIEPAVVKYAKEVWKFS------KKAILVPVDPQGRILNQ 440 (691)
Q Consensus 395 ---~~MPWyAVp~~d~i~~~~~r~ike~f~~~------~iP~LVvL~pqGkv~~~ 440 (691)
..++|-.+.-++ +.+.+.|++. ..|..++||++|+++..
T Consensus 150 ~g~~~~~fp~l~D~~-------~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~ 197 (254)
T 3tjj_A 150 GGLGPIRIPLLSDLT-------HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI 197 (254)
T ss_dssp TSCCSCSSCEEECTT-------SHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred cCCcccccceeeCcH-------HHHHHHcCCccccCCCccceEEEECCCCeEEEE
Confidence 145554443322 2345557875 47999999999999865
No 84
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.12 E-value=1.9e-05 Score=77.55 Aligned_cols=117 Identities=11% Similarity=0.016 Sum_probs=75.9
Q ss_pred CCC-CceeecceecCcEEEEEEecCCCChh-hhHHHH-HHHHhhccCCCCeeEEEEeccc--CCCCCChhhHHHHHHH--
Q 044391 321 GSS-RTRVNIEVLRRKHVLLLISSLDLSDE-EILVLH-LYREHKAREEFDYAIVWLPIVD--RSIAWDEGYRQKFEQL-- 393 (691)
Q Consensus 321 g~~-~~kV~Is~L~gK~VlL~fSal~~~~~-e~~~L~-iY~~lk~~~~~~fEIVwIpiVd--~s~~W~D~d~~~F~~~-- 393 (691)
..+ |+.|++++++||.|+|+|-+.||++| +++-|+ +|++.+.+ +++||-||.-+ ...+-+.++.+.|-.+
T Consensus 24 d~~~G~~v~Ls~~kGKvvll~F~At~C~~c~e~p~L~~l~~~~~~~---g~~vlgvs~d~f~~~e~~~~~~i~~f~~~~~ 100 (207)
T 2r37_A 24 TIDGEEYIPFKQYAGKYVLFVNVASYGGLTGQYIELNALQEELAPF---GLVILGFPCNQFGKQEPGENSEILPTLKYVR 100 (207)
T ss_dssp BTTSSCEEEGGGGTTSEEEEEEECSSSTTTTHHHHHHHHHHHHGGG---TEEEEEEECCCBTTCCCSCHHHHHHHHHHTS
T ss_pred eCCCCCEEcHHHhCCCEEEEEEeCCCCCChHHHHHHHHHHHHhccC---CEEEEEEECcccCcCCCCCHHHHHHHHHhcc
Confidence 345 78899999999999999999999776 677899 99999854 59999999511 0011233445667552
Q ss_pred ---hc--CCCeeeecCCC-CCchHHHHHHHHhhC---------------------cCCceEEEEeCCCCceecc
Q 044391 394 ---QA--MMPWYTVQHPT-IIEPAVVKYAKEVWK---------------------FSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 394 ---~~--~MPWyAVp~~d-~i~~~~~r~ike~f~---------------------~~~iP~LVvL~pqGkv~~~ 440 (691)
.. ..|.++-.-.+ ....+..+++++... ++..|+-+++|++|+++..
T Consensus 101 ~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~ 174 (207)
T 2r37_A 101 PGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMR 174 (207)
T ss_dssp SCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred hhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEE
Confidence 22 33444311110 001235667765432 1223789999999999865
No 85
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.12 E-value=1e-05 Score=74.20 Aligned_cols=105 Identities=13% Similarity=0.200 Sum_probs=74.6
Q ss_pred eecCCCCceeecceecCc--EEEEEE-ecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHH
Q 044391 318 VVDGSSRTRVNIEVLRRK--HVLLLI-SSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFE 391 (691)
Q Consensus 318 l~~g~~~~kV~Is~L~gK--~VlL~f-Sal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~ 391 (691)
-+...+|+.|.+++++|| .|+|+| .+.|||+| +++.|. +|++++.+ . +||.|+. | +.+..++|-
T Consensus 17 ~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~---~-~vv~is~-d-----~~~~~~~~~ 86 (159)
T 2a4v_A 17 SLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEY---A-AVFGLSA-D-----SVTSQKKFQ 86 (159)
T ss_dssp EEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT---C-EEEEEES-C-----CHHHHHHHH
T ss_pred EEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC---C-cEEEEeC-C-----CHHHHHHHH
Confidence 344567788999999998 788887 69999776 567799 99999854 3 9999985 3 244456665
Q ss_pred HHhcCCCeeeecCCCCCchHHHHHHHHhhCcCCce------EEEEeCCCCceeccc
Q 044391 392 QLQAMMPWYTVQHPTIIEPAVVKYAKEVWKFSKKA------ILVPVDPQGRILNQN 441 (691)
Q Consensus 392 ~~~~~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP------~LVvL~pqGkv~~~N 441 (691)
+-+ .++|..+--++ ..+.+.|++...| ..+++ ++|+++...
T Consensus 87 ~~~-~~~~~~l~D~~-------~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~ 133 (159)
T 2a4v_A 87 SKQ-NLPYHLLSDPK-------REFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFKR 133 (159)
T ss_dssp HHH-TCSSEEEECTT-------CHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEEE
T ss_pred HHh-CCCceEEECCc-------cHHHHHhCCcccccCCccceEEEE-cCCEEEEEE
Confidence 533 45654443222 2345668999888 77778 999998653
No 86
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.10 E-value=1e-05 Score=75.04 Aligned_cols=106 Identities=13% Similarity=0.097 Sum_probs=71.9
Q ss_pred eecCCCCceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHH
Q 044391 318 VVDGSSRTRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQL 393 (691)
Q Consensus 318 l~~g~~~~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~ 393 (691)
-+...+|+.|.+++++||.|+|+|= +.||++| +++.|. .|+++ .+++||.|+. | +.+..++|-+-
T Consensus 27 ~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-----~~v~vv~Is~-d-----~~~~~~~~~~~ 95 (165)
T 1q98_A 27 ILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-----SNTIVLCISA-D-----LPFAQARFCGA 95 (165)
T ss_dssp EEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-----TTEEEEEEES-S-----CHHHHTTCTTT
T ss_pred EEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-----CCCEEEEEeC-C-----CHHHHHHHHHH
Confidence 3445678899999999999999985 8999766 567788 99887 3599999985 4 23333344332
Q ss_pred hcCC-CeeeecCCCCCchHHHHHHHHhhCcCC---------ceEEEEeCCCCceeccc
Q 044391 394 QAMM-PWYTVQHPTIIEPAVVKYAKEVWKFSK---------KAILVPVDPQGRILNQN 441 (691)
Q Consensus 394 ~~~M-PWyAVp~~d~i~~~~~r~ike~f~~~~---------iP~LVvL~pqGkv~~~N 441 (691)
..+ +|..+--+. + ..+.+.|++.. .|..+++|++|+++...
T Consensus 96 -~~~~~~~~l~D~~--~----~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~ 146 (165)
T 1q98_A 96 -EGIENAKTVSTFR--N----HALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQ 146 (165)
T ss_dssp -TTCTTEEEEECTT--C----THHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred -cCCCceEEeeccc--c----chHHHHhCceecccccCCccceeEEEEcCCCEEEEEE
Confidence 234 454333220 1 23344577743 49999999999998654
No 87
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.08 E-value=9.9e-06 Score=78.59 Aligned_cols=107 Identities=14% Similarity=0.091 Sum_probs=73.4
Q ss_pred ceecCCCCceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHH
Q 044391 317 PVVDGSSRTRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQ 392 (691)
Q Consensus 317 ~l~~g~~~~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~ 392 (691)
+-+...+|+.|++++++||.|+|+|= +.||++| +++.|. +|+++ .+++||.||. | +.+..++|-+
T Consensus 61 f~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-----~~v~vv~Is~-D-----~~~~~~~~~~ 129 (200)
T 3zrd_A 61 FTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-----ENTVVLCISS-D-----LPFAQSRFCG 129 (200)
T ss_dssp CEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-----TTEEEEEEES-S-----CHHHHTTCTT
T ss_pred eEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-----CCCEEEEEEC-C-----CHHHHHHHHH
Confidence 33445677889999999999999886 7798665 667799 99987 3599999985 3 2333444543
Q ss_pred HhcCC-CeeeecCCCCCchHHHHHHHHhhCcC-------C--ceEEEEeCCCCceeccc
Q 044391 393 LQAMM-PWYTVQHPTIIEPAVVKYAKEVWKFS-------K--KAILVPVDPQGRILNQN 441 (691)
Q Consensus 393 ~~~~M-PWyAVp~~d~i~~~~~r~ike~f~~~-------~--iP~LVvL~pqGkv~~~N 441 (691)
-+ .+ +|-.+.-+. ...+.+.|++. + .|..+++|++|+++...
T Consensus 130 ~~-~~~~f~~l~D~~------~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~ 181 (200)
T 3zrd_A 130 AE-GLSNVITLSTLR------GADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSE 181 (200)
T ss_dssp TT-TCTTEEEEETTS------CTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred Hc-CCCCceEEecCc------hHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEE
Confidence 32 34 555443320 12344557774 3 59999999999998643
No 88
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.06 E-value=1.1e-05 Score=75.07 Aligned_cols=103 Identities=10% Similarity=0.022 Sum_probs=71.5
Q ss_pred ecCCCCceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh
Q 044391 319 VDGSSRTRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ 394 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~ 394 (691)
+...+|+.+++++++||.|+|+|= +.||++| +++.|. +|+++ .+++||.|+. | +.+..++|-+-+
T Consensus 32 l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-----~~v~vv~Is~-d-----~~~~~~~~~~~~ 100 (171)
T 2yzh_A 32 VVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM-----EGVDVTVVSM-D-----LPFAQKRFCESF 100 (171)
T ss_dssp EEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-----TTEEEEEEES-S-----CHHHHHHHHHHT
T ss_pred EECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-----CCceEEEEeC-C-----CHHHHHHHHHHc
Confidence 345677889999999999999985 8999776 556788 88877 4699999986 4 244456665533
Q ss_pred cCC-CeeeecC-CCCCchHHHHHHHHhhCcC-------C--ceEEEEeCCCCceeccc
Q 044391 395 AMM-PWYTVQH-PTIIEPAVVKYAKEVWKFS-------K--KAILVPVDPQGRILNQN 441 (691)
Q Consensus 395 ~~M-PWyAVp~-~d~i~~~~~r~ike~f~~~-------~--iP~LVvL~pqGkv~~~N 441 (691)
.. +|..+.- ++ . .+ +.|++. + .|..+++||+|+++...
T Consensus 101 -~~~~~~~l~D~~~---~----~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~ 149 (171)
T 2yzh_A 101 -NIQNVTVASDFRY---R----DM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQ 149 (171)
T ss_dssp -TCCSSEEEECTTT---C----GG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred -CCCCeEEeecCcc---C----cH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEE
Confidence 33 3433322 21 1 23 557774 2 69999999999998653
No 89
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.96 E-value=9.7e-05 Score=72.75 Aligned_cols=169 Identities=11% Similarity=0.074 Sum_probs=104.1
Q ss_pred CCc--eeecce-ecCcEEEEEEe-cCCCChhh---hHHHH-HHHHhhccCCCCe-eEEEEecccCCCCCChhhHHHHHHH
Q 044391 323 SRT--RVNIEV-LRRKHVLLLIS-SLDLSDEE---ILVLH-LYREHKAREEFDY-AIVWLPIVDRSIAWDEGYRQKFEQL 393 (691)
Q Consensus 323 ~~~--kV~Is~-L~gK~VlL~fS-al~~~~~e---~~~L~-iY~~lk~~~~~~f-EIVwIpiVd~s~~W~D~d~~~F~~~ 393 (691)
+|+ .|++++ ++||.|+|+|= +.|||+|. ++-|. .|+++++ .++ +||-|+. | +....+.|-+-
T Consensus 19 ~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~---~~~~~vv~is~-d-----~~~~~~~~~~~ 89 (241)
T 1nm3_A 19 GDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKK---YGVDDILVVSV-N-----DTFVMNAWKED 89 (241)
T ss_dssp TTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHH---TTCCEEEEEES-S-----CHHHHHHHHHH
T ss_pred CCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH---CCCCEEEEEEc-C-----CHHHHHHHHHh
Confidence 454 799999 99999999986 99997765 67799 9999974 358 9999985 4 23445667553
Q ss_pred hcCCC-eeeecCCCCCchHHHHHHHHhhCcC-----------CceEEEEeCCCCceecccHHHHHHHhCcccc--cCChh
Q 044391 394 QAMMP-WYTVQHPTIIEPAVVKYAKEVWKFS-----------KKAILVPVDPQGRILNQNAFHMLWIWGNLAF--PFSAE 459 (691)
Q Consensus 394 ~~~MP-WyAVp~~d~i~~~~~r~ike~f~~~-----------~iP~LVvL~pqGkv~~~NA~~mI~~wG~~AF--PFT~~ 459 (691)
.. .+ |-.+.-++ .+ +.+.|++. ..|..+++ ++|+++.... |.... ||+..
T Consensus 90 ~~-~~~~~~l~D~~---~~----~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~-------~~~~~~~~~~~~ 153 (241)
T 1nm3_A 90 EK-SENISFIPDGN---GE----FTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFI-------EPNEPGDPFKVS 153 (241)
T ss_dssp TT-CTTSEEEECTT---SH----HHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEE-------CCSCSSCCCSSS
T ss_pred cC-CCceEEEECCC---cH----HHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEE-------eccCCCccceec
Confidence 32 22 32222221 22 34457764 35888999 9999986532 32222 45444
Q ss_pred hHHHHHhhhccchhhhcccCchhhhhhhcCCcEEEEEccCChhHHHHHHHHHHHHHHHhCCceeeEEecccChHHH
Q 044391 460 KEAALWKAESWRLELLIDDIDATILEWMKEERYICLYGGGDIEWIRRFTTSAKAVARAAQINLGMAYVGKNNAKER 535 (691)
Q Consensus 460 r~e~L~~~e~w~lelLvd~id~~I~~~i~egK~I~LYgG~D~~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~~e~ 535 (691)
..+++-+. +++.. + ....|-+|... || -|..+++++-+..++++|.+-|..+..++.
T Consensus 154 ~~~~il~~-----------l~~~~---i-~~~~i~ly~~~---~C-p~C~~a~~~L~~~~i~~~~~~i~~~~~~~~ 210 (241)
T 1nm3_A 154 DADTMLKY-----------LAPQH---Q-VQESISIFTKP---GC-PFCAKAKQLLHDKGLSFEEIILGHDATIVS 210 (241)
T ss_dssp SHHHHHHH-----------HCTTS---C-CCCCEEEEECS---SC-HHHHHHHHHHHHHTCCCEEEETTTTCCHHH
T ss_pred CHHHHHHH-----------hhhhc---c-ccceEEEEECC---CC-hHHHHHHHHHHHcCCceEEEECCCchHHHH
Confidence 44443321 12111 2 34458888665 55 344445554444599999999987744333
No 90
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.95 E-value=7.2e-06 Score=77.05 Aligned_cols=107 Identities=11% Similarity=0.141 Sum_probs=74.9
Q ss_pred ceecCCCCceeeccee--cCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHH
Q 044391 317 PVVDGSSRTRVNIEVL--RRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKF 390 (691)
Q Consensus 317 ~l~~g~~~~kV~Is~L--~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F 390 (691)
+-+...+|+.|+++++ +||.|.|+|= +.|||+| +++-|. .|+++++ .++++|-|+. | +.+..++|
T Consensus 14 F~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~---~~v~vv~is~-d-----~~~~~~~~ 84 (164)
T 4gqc_A 14 FTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEK---ANAEVLAISV-D-----SPWCLKKF 84 (164)
T ss_dssp CEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGG---SSSEEEEEES-S-----CHHHHHHH
T ss_pred cEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhc---cCceEEEecC-C-----CHHHHHHH
Confidence 3344567889999998 8998888876 8899877 567788 9999874 4689999985 4 24555677
Q ss_pred HHHhcCCCeeeecCCCCCchHHHHHHHHhhCcC----------CceEEEEeCCCCceecc
Q 044391 391 EQLQAMMPWYTVQHPTIIEPAVVKYAKEVWKFS----------KKAILVPVDPQGRILNQ 440 (691)
Q Consensus 391 ~~~~~~MPWyAVp~~d~i~~~~~r~ike~f~~~----------~iP~LVvL~pqGkv~~~ 440 (691)
-+- ..+||-.+--++ . .+.+.|++. ..|+..|+|++|++...
T Consensus 85 ~~~-~~~~fp~l~D~~---~----~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~ 136 (164)
T 4gqc_A 85 KDE-NRLAFNLLSDYN---R----EVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYK 136 (164)
T ss_dssp HHH-TTCCSEEEECTT---S----HHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEE
T ss_pred HHh-cCcccceeecCc---h----HHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEE
Confidence 553 345544443332 2 244557763 25788999999999754
No 91
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.86 E-value=4.7e-05 Score=67.91 Aligned_cols=78 Identities=10% Similarity=-0.035 Sum_probs=59.4
Q ss_pred CCceeecceecCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCe
Q 044391 323 SRTRVNIEVLRRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPW 399 (691)
Q Consensus 323 ~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPW 399 (691)
.+..+.++.++||.|+++|.+.||++|.- +.|. ++++++ +++.++.|.+ |++.
T Consensus 40 ~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~~v~~--------~~~~------------ 95 (141)
T 3hxs_A 40 ENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYA----GKIYIYKVNV--------DKEP------------ 95 (141)
T ss_dssp SSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT----TTCEEEEEET--------TTCH------------
T ss_pred ccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc----CceEEEEEEC--------CCCH------------
Confidence 44568888999999999999999988853 5677 777764 3477777654 2211
Q ss_pred eeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 400 YTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 400 yAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|++++.|++++++++|+++.
T Consensus 96 ---------------~~~~~~~v~~~Pt~~~~~~~g~~~~ 120 (141)
T 3hxs_A 96 ---------------ELARDFGIQSIPTIWFVPMKGEPQV 120 (141)
T ss_dssp ---------------HHHHHTTCCSSSEEEEECSSSCCEE
T ss_pred ---------------HHHHHcCCCCcCEEEEEeCCCCEEE
Confidence 2556789999999999999999763
No 92
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.82 E-value=7.6e-05 Score=69.28 Aligned_cols=103 Identities=11% Similarity=0.045 Sum_probs=72.3
Q ss_pred CCCC--ceeecce-ecCcEEEEEEe-cCCCChhh---hHHHH-HHHHhhccCCCCee-EEEEecccCCCCCChhhHHHHH
Q 044391 321 GSSR--TRVNIEV-LRRKHVLLLIS-SLDLSDEE---ILVLH-LYREHKAREEFDYA-IVWLPIVDRSIAWDEGYRQKFE 391 (691)
Q Consensus 321 g~~~--~kV~Is~-L~gK~VlL~fS-al~~~~~e---~~~L~-iY~~lk~~~~~~fE-IVwIpiVd~s~~W~D~d~~~F~ 391 (691)
..+| +.|++++ ++||.|+|+|= +.||++|. ++-|. .|+++++ .+++ ||-|+. | +....++|-
T Consensus 19 ~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~---~~v~~vv~Is~-d-----~~~~~~~~~ 89 (162)
T 1tp9_A 19 DEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKS---KGVTEILCISV-N-----DPFVMKAWA 89 (162)
T ss_dssp CTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHH---TTCCCEEEEES-S-----CHHHHHHHH
T ss_pred cCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH---CCCCEEEEEEC-C-----CHHHHHHHH
Confidence 4566 7899999 99999999998 89996665 56799 9999974 3588 999985 4 234455665
Q ss_pred HHhcCC--CeeeecCCCCCchHHHHHHHHhhCcC------C-----ceEEEEeCCCCceeccc
Q 044391 392 QLQAMM--PWYTVQHPTIIEPAVVKYAKEVWKFS------K-----KAILVPVDPQGRILNQN 441 (691)
Q Consensus 392 ~~~~~M--PWyAVp~~d~i~~~~~r~ike~f~~~------~-----iP~LVvL~pqGkv~~~N 441 (691)
+-+ .. ||-.+.-++ +.+.+.|++. + .|..+|+| +|+++...
T Consensus 90 ~~~-~~~~~~~~l~D~~-------~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~ 143 (162)
T 1tp9_A 90 KSY-PENKHVKFLADGS-------ATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAAN 143 (162)
T ss_dssp HTC-TTCSSEEEEECTT-------SHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEE
T ss_pred Hhc-CCCCCeEEEECCC-------chHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEE
Confidence 533 23 443332221 2344557775 3 79999999 99998653
No 93
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.77 E-value=2e-05 Score=80.16 Aligned_cols=102 Identities=14% Similarity=0.154 Sum_probs=71.4
Q ss_pred CCCceeec-cee--cCcE-EEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh
Q 044391 322 SSRTRVNI-EVL--RRKH-VLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ 394 (691)
Q Consensus 322 ~~~~kV~I-s~L--~gK~-VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~ 394 (691)
..| +|++ +++ +||. |+++|-+.||+.| ++..|. .|+++++ .+++||.||+ | +......|.+..
T Consensus 19 ~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~---~gv~VI~VS~-D-----s~~~~~~w~~~~ 88 (249)
T 3a2v_A 19 DHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQR---LGVDLIGLSV-D-----SVFSHIKWKEWI 88 (249)
T ss_dssp TTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHH---TTEEEEEEES-S-----CHHHHHHHHHHH
T ss_pred CCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHh---CCcEEEEEEC-C-----CHHHHHHHHHHH
Confidence 344 6999 998 9996 4557899999776 567799 9999984 3699999996 4 234444554321
Q ss_pred -----cCCCeeeecCCCCCchHHHHHHHHhhCcC-------CceEEEEeCCCCceecc
Q 044391 395 -----AMMPWYTVQHPTIIEPAVVKYAKEVWKFS-------KKAILVPVDPQGRILNQ 440 (691)
Q Consensus 395 -----~~MPWyAVp~~d~i~~~~~r~ike~f~~~-------~iP~LVvL~pqGkv~~~ 440 (691)
..++|..+--+ .+.+.+.|++. ..|.++++||+|+++..
T Consensus 89 ~~~~~~~i~fPil~D~-------~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~ 139 (249)
T 3a2v_A 89 ERHIGVRIPFPIIADP-------QGTVARRLGLLHAESATHTVRGVFIVDARGVIRTM 139 (249)
T ss_dssp HHHTCCCCCSCEEECT-------TSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEE
T ss_pred HHhcCCCCceeEEECC-------chHHHHHhCCccccCCCcccceEEEECCCCeEEEE
Confidence 14444333222 23455668887 89999999999998764
No 94
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.77 E-value=6.8e-05 Score=75.27 Aligned_cols=106 Identities=10% Similarity=0.057 Sum_probs=72.3
Q ss_pred ecCCCCceeecceecCc-EEEEEE-ecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHH
Q 044391 319 VDGSSRTRVNIEVLRRK-HVLLLI-SSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQL 393 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK-~VlL~f-Sal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~ 393 (691)
+...+| .|.+++++|| .|+|+| .+.|||.| ++..|. .|+++++ .+++||.||+ |+ ....+.|-+-
T Consensus 14 l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~---~~v~vigIS~-D~-----~~~~~~~~~~ 83 (233)
T 2v2g_A 14 ADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKK---RGVKLIALSC-DN-----VADHKEWSED 83 (233)
T ss_dssp EEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHH---TTEEEEEEES-SC-----HHHHHHHHHH
T ss_pred EecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHH---cCCEEEEEcC-CC-----HHHHHHHHHH
Confidence 334456 7999999998 777777 58899766 567799 9999974 4699999995 42 3344555442
Q ss_pred -----hc--CCCeeeecCCCCCchHHHHHHHHhhCcC------------CceEEEEeCCCCceeccc
Q 044391 394 -----QA--MMPWYTVQHPTIIEPAVVKYAKEVWKFS------------KKAILVPVDPQGRILNQN 441 (691)
Q Consensus 394 -----~~--~MPWyAVp~~d~i~~~~~r~ike~f~~~------------~iP~LVvL~pqGkv~~~N 441 (691)
.. .++|.-+--++ +.+.+.|++. ..|..+++||+|++....
T Consensus 84 i~~~~~~~~~~~fpil~D~~-------~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~ 143 (233)
T 2v2g_A 84 VKCLSGVKGDMPYPIIADET-------RELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSI 143 (233)
T ss_dssp HHHHHTCCSSCSSCEEECTT-------CHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEE
T ss_pred HHHhhCcccCCceEEEECCh-------HHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEE
Confidence 12 45554333221 2344557764 479999999999997653
No 95
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.76 E-value=0.00013 Score=72.44 Aligned_cols=105 Identities=10% Similarity=0.075 Sum_probs=71.7
Q ss_pred ecCCCCceeecceecCc--EEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHH
Q 044391 319 VDGSSRTRVNIEVLRRK--HVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQL 393 (691)
Q Consensus 319 ~~g~~~~kV~Is~L~gK--~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~ 393 (691)
+...+| .|++++++|| .|+++|-+.||+.| ++..|. .|+++++ .+++||.||+ |+ ......|-+-
T Consensus 16 l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~---~~v~vi~IS~-D~-----~~~~~~~~~~ 85 (224)
T 1prx_A 16 ANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAK---RNVKLIALSI-DS-----VEDHLAWSKD 85 (224)
T ss_dssp EEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHT---TTEEEEEEES-SC-----HHHHHHHHHH
T ss_pred EecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHH---CCCEEEEEcC-CC-----HHHHHHHHHH
Confidence 334556 7999999998 56666789999776 567799 9999974 4699999996 42 3344445432
Q ss_pred ----h-----cCCCeeeecCCCCCchHHHHHHHHhhCcC------------CceEEEEeCCCCceecc
Q 044391 394 ----Q-----AMMPWYTVQHPTIIEPAVVKYAKEVWKFS------------KKAILVPVDPQGRILNQ 440 (691)
Q Consensus 394 ----~-----~~MPWyAVp~~d~i~~~~~r~ike~f~~~------------~iP~LVvL~pqGkv~~~ 440 (691)
. ..++|-.+.-++ +.+.+.|++. ..|..+++||+|++...
T Consensus 86 i~~~~~~~~~~~~~fpil~D~~-------~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~ 146 (224)
T 1prx_A 86 INAYNSEEPTEKLPFPIIDDRN-------RELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLS 146 (224)
T ss_dssp HHHHTTSCCCSCCSSCEEECTT-------CHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEE
T ss_pred HHHhhCcccccCcCcceeecCc-------hHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEE
Confidence 1 355554443221 2344557763 37999999999999765
No 96
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.75 E-value=7.3e-05 Score=73.93 Aligned_cols=102 Identities=9% Similarity=0.036 Sum_probs=69.8
Q ss_pred CCceeecceecCc--EEEEEEecCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHH----H
Q 044391 323 SRTRVNIEVLRRK--HVLLLISSLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQ----L 393 (691)
Q Consensus 323 ~~~kV~Is~L~gK--~VlL~fSal~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~----~ 393 (691)
+| .|++++++|| .|+++|-+.||+.| ++..|. .|+++++ .+++||.||+ |+ ....+.|-+ +
T Consensus 20 ~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~---~~v~vi~vS~-D~-----~~~~~~~~~~i~~~ 89 (220)
T 1xcc_A 20 DG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLK---LNCKLIGFSC-NS-----KESHDKWIEDIKYY 89 (220)
T ss_dssp SS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHT---TTEEEEEEES-SC-----HHHHHHHHHHHHHH
T ss_pred CC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH---cCCEEEEEeC-CC-----HHHHHHHHHHHHHH
Confidence 56 7999999998 45555588999766 667799 9999974 4699999996 42 344455543 1
Q ss_pred --hcCCCeeeecCCCCCchHHHHHHHHhhCcC------------CceEEEEeCCCCceeccc
Q 044391 394 --QAMMPWYTVQHPTIIEPAVVKYAKEVWKFS------------KKAILVPVDPQGRILNQN 441 (691)
Q Consensus 394 --~~~MPWyAVp~~d~i~~~~~r~ike~f~~~------------~iP~LVvL~pqGkv~~~N 441 (691)
...++|..+--++ +.+.+.|++. ..|..++|||+|++....
T Consensus 90 ~~~~~~~fpil~D~~-------~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~ 144 (220)
T 1xcc_A 90 GKLNKWEIPIVCDES-------RELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATV 144 (220)
T ss_dssp HTCSCCCCCEEECTT-------SHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEE
T ss_pred hcCCCCcceeEECch-------hHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEE
Confidence 2355554333222 2344557773 379999999999998653
No 97
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=97.66 E-value=6e-05 Score=72.01 Aligned_cols=75 Identities=13% Similarity=0.154 Sum_probs=53.4
Q ss_pred ecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecC
Q 044391 328 NIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQH 404 (691)
Q Consensus 328 ~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~ 404 (691)
.++.++||.|+|.|++.||+||. .+.|. ++++. .+++++.|.+ |+..+..+.+..
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~-----~~v~~~~v~~--------d~~~~~~~~~~~--------- 105 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQ-----PNIELAIISK--------GRAEDDLRQRLA--------- 105 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHC-----TTEEEEEECH--------HHHHHHTTTTTT---------
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHC-----CCcEEEEEEC--------CCCHHHHHHHHH---------
Confidence 34567899999999999999884 58898 88753 2588888754 433222111110
Q ss_pred CCCCchHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 405 PTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 405 ~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
-+++++|++++++++|+++.
T Consensus 106 ---------------~~v~~iPt~i~~~~~G~~~~ 125 (167)
T 1z6n_A 106 ---------------LERIAIPLVLVLDEEFNLLG 125 (167)
T ss_dssp ---------------CSSCCSSEEEEECTTCCEEE
T ss_pred ---------------cCCCCcCeEEEECCCCCEEE
Confidence 14799999999999999864
No 98
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=97.63 E-value=3e-05 Score=71.53 Aligned_cols=89 Identities=13% Similarity=0.020 Sum_probs=59.5
Q ss_pred CceeecceecCcEEEEEEe-cCCCChhh--hHHH---H-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcC
Q 044391 324 RTRVNIEVLRRKHVLLLIS-SLDLSDEE--ILVL---H-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAM 396 (691)
Q Consensus 324 ~~kV~Is~L~gK~VlL~fS-al~~~~~e--~~~L---~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~ 396 (691)
+..+..+..+||.|+|+|. +.||++|. .+.| . +.+.. +.+|.+|-|.+ + +.. .
T Consensus 37 ~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~----~~~~~~v~vd~-~------~~~---------~ 96 (154)
T 2ju5_A 37 AEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFA----GVHLHMVEVDF-P------QKN---------H 96 (154)
T ss_dssp HHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHH----HHHCEEEEEEC-C------SSC---------C
T ss_pred HHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHh----cCcEEEEEecC-c------ccc---------C
Confidence 3445666788999999999 99998874 3555 4 43333 23466666543 1 111 1
Q ss_pred CCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 397 MPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 397 MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
+| ++. ....+.+.+.|++++.|+++++|++|+++..
T Consensus 97 ~~-----~~~---~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~ 132 (154)
T 2ju5_A 97 QP-----EEQ---RQKNQELKAQYKVTGFPELVFIDAEGKQLAR 132 (154)
T ss_dssp CC-----HHH---HHHHHHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred CC-----hhh---HhhHHHHHHHcCCCCCCEEEEEcCCCCEEEE
Confidence 22 221 1334567788999999999999999999864
No 99
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.62 E-value=0.00011 Score=64.51 Aligned_cols=74 Identities=11% Similarity=0.057 Sum_probs=55.4
Q ss_pred cceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCC
Q 044391 329 IEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHP 405 (691)
Q Consensus 329 Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~ 405 (691)
....+||.|+++|.+.||++|. .+.|. ++++++ .++.++.|.+ | .|+
T Consensus 21 ~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~----~~v~~~~v~~-~-----~d~-------------------- 70 (126)
T 2l57_A 21 EEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE----GKFNIYYARL-E-----EEK-------------------- 70 (126)
T ss_dssp TTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS----SSCEEEEEET-T-----SSH--------------------
T ss_pred HHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc----CCeEEEEEeC-C-----CCc--------------------
Confidence 3446799999999999998874 35677 777764 4588888863 0 011
Q ss_pred CCCchHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 406 TIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 406 d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
-..+.+.|++++.|++++++++|+++.
T Consensus 71 -------~~~~~~~~~v~~~Pt~~~~~~~G~~~~ 97 (126)
T 2l57_A 71 -------NIDLAYKYDANIVPTTVFLDKEGNKFY 97 (126)
T ss_dssp -------HHHHHHHTTCCSSSEEEEECTTCCEEE
T ss_pred -------hHHHHHHcCCcceeEEEEECCCCCEEE
Confidence 124566799999999999999999864
No 100
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.62 E-value=0.00018 Score=63.63 Aligned_cols=82 Identities=5% Similarity=0.018 Sum_probs=60.0
Q ss_pred eecCCCCceeecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh
Q 044391 318 VVDGSSRTRVNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ 394 (691)
Q Consensus 318 l~~g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~ 394 (691)
-+...++..+.....+||.|+++|.+.||++|. .+.|. ++++.+. ++.++.|.+ |+..
T Consensus 26 ~~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~----~v~~~~vd~--------d~~~------- 86 (128)
T 3ul3_B 26 RLQQNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK----RIYLLKVDL--------DKNE------- 86 (128)
T ss_dssp CCCCCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG----GEEEEEEEG--------GGCH-------
T ss_pred ccccCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC----CeEEEEEEC--------CCCH-------
Confidence 333445555666667899999999999998874 36788 8887753 477777754 2221
Q ss_pred cCCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 395 AMMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 395 ~~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|++++.|+++++ .+|+.+.
T Consensus 87 --------------------~l~~~~~v~~~Pt~~~~-~~G~~~~ 110 (128)
T 3ul3_B 87 --------------------SLARKFSVKSLPTIILL-KNKTMLA 110 (128)
T ss_dssp --------------------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------------------HHHHHcCCCCcCEEEEE-ECCEEEE
Confidence 35677999999999999 7898775
No 101
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.60 E-value=0.00021 Score=67.49 Aligned_cols=102 Identities=10% Similarity=0.056 Sum_probs=71.0
Q ss_pred CCCCceeeccee-cCcEEEEEE-ecCCCChh---hhHHHH-HHHHhhccCCCCe-eEEEEecccCCCCCChhhHHHHHHH
Q 044391 321 GSSRTRVNIEVL-RRKHVLLLI-SSLDLSDE---EILVLH-LYREHKAREEFDY-AIVWLPIVDRSIAWDEGYRQKFEQL 393 (691)
Q Consensus 321 g~~~~kV~Is~L-~gK~VlL~f-Sal~~~~~---e~~~L~-iY~~lk~~~~~~f-EIVwIpiVd~s~~W~D~d~~~F~~~ 393 (691)
..+++.|+++++ +||.|+|+| -+.|||+| +++-|+ .|+++++ .++ +||-|+. | +....++|-+-
T Consensus 17 ~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~---~gv~~vv~Is~-d-----~~~~~~~~~~~ 87 (167)
T 2wfc_A 17 ATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHG---KGVDIIACMAV-N-----DSFVMDAWGKA 87 (167)
T ss_dssp SSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHH---TTCCEEEEEES-S-----CHHHHHHHHHH
T ss_pred CCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH---CCCCEEEEEeC-C-----CHHHHHHHHHh
Confidence 456778999998 999888877 59999765 567788 9999974 358 9999985 4 23445666553
Q ss_pred hcCCC--eeeecCCCCCchHHHHHHHHhhCcCC-----------ceEEEEeCCCCceecc
Q 044391 394 QAMMP--WYTVQHPTIIEPAVVKYAKEVWKFSK-----------KAILVPVDPQGRILNQ 440 (691)
Q Consensus 394 ~~~MP--WyAVp~~d~i~~~~~r~ike~f~~~~-----------iP~LVvL~pqGkv~~~ 440 (691)
. .+| |-.+.-++ . .+.+.|++.. .|..+++ ++|+++..
T Consensus 88 ~-~~~~~fp~l~D~~---~----~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~ 138 (167)
T 2wfc_A 88 H-GADDKVQMLADPG---G----AFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKV 138 (167)
T ss_dssp T-TCTTTSEEEECTT---S----HHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEE
T ss_pred c-CCCcceEEEECCC---C----cHHHHcCCccccccccCcccceEEEEEE-eCCEEEEE
Confidence 3 344 43332222 2 2344577754 3999999 99999876
No 102
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.51 E-value=0.00014 Score=65.04 Aligned_cols=77 Identities=10% Similarity=-0.057 Sum_probs=55.4
Q ss_pred eeecceecCcEEEEEEecCCCChhhh--HHH---H-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCe
Q 044391 326 RVNIEVLRRKHVLLLISSLDLSDEEI--LVL---H-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPW 399 (691)
Q Consensus 326 kV~Is~L~gK~VlL~fSal~~~~~e~--~~L---~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPW 399 (691)
+..++..+||.|+|+|.+.||++|.. +.+ . ++++++ ++.++.|.+ |..
T Consensus 23 ~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-----~~~~~~vd~--------~~~------------- 76 (134)
T 2fwh_A 23 NQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-----DTVLLQANV--------TAN------------- 76 (134)
T ss_dssp HHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-----TSEEEEEEC--------TTC-------------
T ss_pred HHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-----CcEEEEEeC--------CCC-------------
Confidence 45566777999999999999998854 334 4 554442 377777764 111
Q ss_pred eeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 400 YTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 400 yAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
+ .....+.+.|++.+.|+++++|++|+++
T Consensus 77 ------~----~~~~~l~~~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 77 ------D----AQDVALLKHLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp ------C----HHHHHHHHHTTCCSSSEEEEECTTSCBC
T ss_pred ------c----chHHHHHHHcCCCCCCEEEEECCCCCEe
Confidence 0 1234566779999999999999999987
No 103
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=97.48 E-value=3.8e-05 Score=71.24 Aligned_cols=97 Identities=14% Similarity=0.094 Sum_probs=57.8
Q ss_pred eecCcEEEEEEecCCCChhhh---HHH--H-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecC
Q 044391 331 VLRRKHVLLLISSLDLSDEEI---LVL--H-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQH 404 (691)
Q Consensus 331 ~L~gK~VlL~fSal~~~~~e~---~~L--~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~ 404 (691)
..+||.|+|.|.+.||++|.- .+| . +.+.++. +|.+|-|.+ |. +.+............+..++.
T Consensus 44 ~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~----~~~~v~v~~-d~-----~~~~~~~~~~~~~~~~~~~~~ 113 (172)
T 3f9u_A 44 RQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN----DYVLITLYV-DN-----KTPLTEPVKIMENGTERTLRT 113 (172)
T ss_dssp HHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH----HCEEEEEET-TC-----CCEEEEEEEEEETTEEEEEEE
T ss_pred HHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC----CEEEEEEec-Cc-----ccccchhhhhhhcchhhhhhh
Confidence 356999999999999998853 222 3 4444432 488888765 21 100000011122333333332
Q ss_pred CCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 405 PTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 405 ~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
.. ........+.|++.++|+++++|++|+++..
T Consensus 114 ~~---~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~ 146 (172)
T 3f9u_A 114 VG---DKWSYLQRVKFGANAQPFYVLIDNEGNPLNK 146 (172)
T ss_dssp HH---HHHHHHHHHHHSCCCSSEEEEECTTSCBSSC
T ss_pred hh---hhhhHHHHHHcCCCCcceEEEECCCCCEEee
Confidence 11 1222233578999999999999999999865
No 104
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.00032 Score=70.41 Aligned_cols=108 Identities=13% Similarity=0.114 Sum_probs=72.2
Q ss_pred CCCCceeecceecCcEEEEEEe-cCCCChh--hhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHH-hc
Q 044391 321 GSSRTRVNIEVLRRKHVLLLIS-SLDLSDE--EILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQL-QA 395 (691)
Q Consensus 321 g~~~~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~-~~ 395 (691)
+.++..|++++++||.|.|||= +.|+|.| |+.-+. .|++.++ .+.+||-||. | +......|.+- ..
T Consensus 39 d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~---~g~~vigiS~-D-----s~~sh~aw~~~~~~ 109 (216)
T 3sbc_A 39 DGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEE---QGAQVLFAST-D-----SEYSLLAWTNIPRK 109 (216)
T ss_dssp TTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHH---TTEEEEEEES-S-----CHHHHHHHHTSCGG
T ss_pred CCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhcc---CCceEEEeec-C-----chhhHHHHHHHHHH
Confidence 3455689999999999999997 5667666 566688 9999984 4699999996 5 25566677542 22
Q ss_pred CCCeeeecCCCCCchHHHHHHHHhhCcC------CceEEEEeCCCCceec
Q 044391 396 MMPWYTVQHPTIIEPAVVKYAKEVWKFS------KKAILVPVDPQGRILN 439 (691)
Q Consensus 396 ~MPWyAVp~~d~i~~~~~r~ike~f~~~------~iP~LVvL~pqGkv~~ 439 (691)
...-..++||-+.|. -+.+.+.|++- ..+...||||+|++..
T Consensus 110 ~~~~~~l~fpllsD~--~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~ 157 (216)
T 3sbc_A 110 EGGLGPINIPLLADT--NHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRH 157 (216)
T ss_dssp GTCCCSCSSCEEECT--TSHHHHHHTCEETTTTEECEEEEEECTTSBEEE
T ss_pred hCCccCcccceEeCC--CCHHHHHcCCeeccCCceeeEEEEECCCCeEEE
Confidence 222223455422222 22344456662 2488999999998854
No 105
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.33 E-value=0.00059 Score=68.56 Aligned_cols=108 Identities=14% Similarity=0.151 Sum_probs=75.0
Q ss_pred CCCCceeecceecCcEEEEEEec-CCCCh--hhhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHH-Hhc
Q 044391 321 GSSRTRVNIEVLRRKHVLLLISS-LDLSD--EEILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQ-LQA 395 (691)
Q Consensus 321 g~~~~kV~Is~L~gK~VlL~fSa-l~~~~--~e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~-~~~ 395 (691)
..++.+|++++++||.|.|||=- .++|. .|+.-+. .|++.++ .+.+||-||. | +-....+|.+ ...
T Consensus 43 d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~---~g~~vigiS~-D-----s~~sh~~w~~~~~~ 113 (219)
T 3tue_A 43 NGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNE---LNCEVLACSI-D-----SEYAHLQWTLQDRK 113 (219)
T ss_dssp TSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHT---TTEEEEEEES-S-----CHHHHHHHHHSCGG
T ss_pred CCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhcc---CCcEEEEeeC-C-----chhhHHHHhhhhHH
Confidence 34567899999999999999984 44544 4677799 9999984 4799999996 5 3556677753 345
Q ss_pred CCCeeeecCCCCCchHHHHHHHHhhCc----CCc--eEEEEeCCCCceec
Q 044391 396 MMPWYTVQHPTIIEPAVVKYAKEVWKF----SKK--AILVPVDPQGRILN 439 (691)
Q Consensus 396 ~MPWyAVp~~d~i~~~~~r~ike~f~~----~~i--P~LVvL~pqGkv~~ 439 (691)
...-+.+|||-+-|. -+.+.+.|++ .+. -...||||+|++..
T Consensus 114 ~~~~~~l~fpllsD~--~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~ 161 (219)
T 3tue_A 114 KGGLGTMAIPILADK--TKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQ 161 (219)
T ss_dssp GTCCCSCSSCEEECT--TSHHHHHTTCEETTTTEECEEEEEECTTSBEEE
T ss_pred hcCccccccccccCc--ccHHHHHcCCcccCCCeeEEEEEEECCCCeEEE
Confidence 555566677533332 2345555666 233 37899999998853
No 106
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.29 E-value=0.00012 Score=64.79 Aligned_cols=73 Identities=12% Similarity=0.042 Sum_probs=51.3
Q ss_pred ecCcEEEEEEecCCCChhhh--HHHH---HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCC
Q 044391 332 LRRKHVLLLISSLDLSDEEI--LVLH---LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPT 406 (691)
Q Consensus 332 L~gK~VlL~fSal~~~~~e~--~~L~---iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d 406 (691)
.+||.|+|+|.+.||++|.. +.|. +.++++ .++.++.|.+ +. .+
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~----~~~~~~~vd~--------~~-------------------~~ 75 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIA----KHFEVVKIDV--------GN-------------------FD 75 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHH----HHCEEEEEEC--------TT-------------------TT
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhc----CCEEEEEEeC--------Cc-------------------cc
Confidence 35999999999999988853 3333 333332 3588888865 11 11
Q ss_pred CCchHHHHHHHHhhCc---CCceEEEEeCCCCceecc
Q 044391 407 IIEPAVVKYAKEVWKF---SKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 407 ~i~~~~~r~ike~f~~---~~iP~LVvL~pqGkv~~~ 440 (691)
....+.+.|++ ++.|+++++|++|+++..
T Consensus 76 -----~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~ 107 (133)
T 3fk8_A 76 -----RNLELSQAYGDPIQDGIPAVVVVNSDGKVRYT 107 (133)
T ss_dssp -----SSHHHHHHTTCGGGGCSSEEEEECTTSCEEEE
T ss_pred -----chHHHHHHhCCccCCccceEEEECCCCCEEEE
Confidence 11235677999 999999999999998854
No 107
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.24 E-value=0.0007 Score=60.57 Aligned_cols=67 Identities=10% Similarity=0.005 Sum_probs=50.1
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.|+++|.+.||++|.- +.|. ++++++ +++.++-|.+ |++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~----~~v~~~~vd~--------~~~----------------------- 81 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYD----GQIVIYKVDT--------EKE----------------------- 81 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTT----TTCEEEEEET--------TTC-----------------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhc----CCEEEEEEeC--------CCC-----------------------
Confidence 4789999999999988743 5677 777664 3466666643 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
..+.+.|++++.|+++++|++|+++
T Consensus 82 ----~~l~~~~~v~~~Pt~~~~~~~G~~~ 106 (136)
T 2l5l_A 82 ----QELAGAFGIRSIPSILFIPMEGKPE 106 (136)
T ss_dssp ----HHHHHHTTCCSSCEEEEECSSSCCE
T ss_pred ----HHHHHHcCCCCCCEEEEECCCCcEE
Confidence 1345668999999999999999986
No 108
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.11 E-value=0.00085 Score=57.77 Aligned_cols=67 Identities=15% Similarity=0.087 Sum_probs=51.3
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.||.|+++|.+.||++|. .+.|. ++++++ +++.++.|.+ |++ +
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~----~~v~~~~vd~--------~~~------------------~---- 61 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMG----DKLKIVKIDV--------DEN------------------Q---- 61 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHT----TTCEEEEEET--------TTC------------------C----
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC----CCcEEEEEEC--------CCC------------------H----
Confidence 689999999999998874 36677 887765 2478888764 211 1
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|++++.|+++++ ++|+++.
T Consensus 62 -----~l~~~~~v~~~Pt~~~~-~~G~~~~ 85 (112)
T 2voc_A 62 -----ETAGKYGVMSIPTLLVL-KDGEVVE 85 (112)
T ss_dssp -----SHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred -----HHHHHcCCCcccEEEEE-eCCEEEE
Confidence 14566899999999999 9999874
No 109
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.06 E-value=0.0019 Score=62.27 Aligned_cols=118 Identities=14% Similarity=0.028 Sum_probs=74.8
Q ss_pred CC-ceeecce-ecCcEE-EEEEecCCCChh---hhHHHH-HHHHhhccCCCCee-EEEEecccCCCCCChhhHHHHHHHh
Q 044391 323 SR-TRVNIEV-LRRKHV-LLLISSLDLSDE---EILVLH-LYREHKAREEFDYA-IVWLPIVDRSIAWDEGYRQKFEQLQ 394 (691)
Q Consensus 323 ~~-~kV~Is~-L~gK~V-lL~fSal~~~~~---e~~~L~-iY~~lk~~~~~~fE-IVwIpiVd~s~~W~D~d~~~F~~~~ 394 (691)
+| +.|++++ ++||.| +++|=+.|||+| |++-|+ .|++++++ +++ ||-|+. | +....++|-+-.
T Consensus 43 ~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~---gv~~vv~Is~-d-----~~~~~~~f~~~~ 113 (184)
T 3uma_A 43 DGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILAR---GVDDIAVVAV-N-----DLHVMGAWATHS 113 (184)
T ss_dssp TEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTT---TCCEEEEEES-S-----CHHHHHHHHHHH
T ss_pred CCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHc---CCCEEEEEEC-C-----CHHHHHHHHHHh
Confidence 55 7899999 899965 555669999776 467799 99999843 588 999986 3 234556675433
Q ss_pred cCCC--eeeecCCCCCchHHHHHHHHhhCcC-----------CceEEEEeCCCCceecccHHHHHHHhCcccccCChhhH
Q 044391 395 AMMP--WYTVQHPTIIEPAVVKYAKEVWKFS-----------KKAILVPVDPQGRILNQNAFHMLWIWGNLAFPFSAEKE 461 (691)
Q Consensus 395 ~~MP--WyAVp~~d~i~~~~~r~ike~f~~~-----------~iP~LVvL~pqGkv~~~NA~~mI~~wG~~AFPFT~~r~ 461 (691)
..| |--+.-++ ..+.+.|++. ..|..+|++ +|+++.... |.+.=+++.+..
T Consensus 114 -~~~~~fp~l~D~~-------~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~-------~~~~g~~~~~~~ 177 (184)
T 3uma_A 114 -GGMGKIHFLSDWN-------AAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNI-------EESPGQATASGA 177 (184)
T ss_dssp -TCTTTSEEEECTT-------CHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEE-------CSSTTCCSTTSH
T ss_pred -CCCCceEEEEcCc-------hHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEE-------eCCCCCCcCCCH
Confidence 233 33332222 2344457774 246777886 999976542 334445665555
Q ss_pred HHHH
Q 044391 462 AALW 465 (691)
Q Consensus 462 e~L~ 465 (691)
+++-
T Consensus 178 ~~vL 181 (184)
T 3uma_A 178 AAML 181 (184)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 110
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=97.06 E-value=0.0029 Score=60.39 Aligned_cols=103 Identities=16% Similarity=0.100 Sum_probs=68.3
Q ss_pred CCCCceeecce-ecCcEEEEEE-ecCCCChhh---hHHHH-HHHHhhccCCCCeeEEE-EecccCCCCCChhhHHHHHHH
Q 044391 321 GSSRTRVNIEV-LRRKHVLLLI-SSLDLSDEE---ILVLH-LYREHKAREEFDYAIVW-LPIVDRSIAWDEGYRQKFEQL 393 (691)
Q Consensus 321 g~~~~kV~Is~-L~gK~VlL~f-Sal~~~~~e---~~~L~-iY~~lk~~~~~~fEIVw-IpiVd~s~~W~D~d~~~F~~~ 393 (691)
..+++.|.+++ ++||.|.|+| =+.|||+|. ++-|. .|+++++ .+++||. ||. | +....++|-+-
T Consensus 29 ~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~---~gv~vv~~iS~-D-----~~~~~~~f~~~ 99 (173)
T 3mng_A 29 GEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKA---KGVQVVACLSV-N-----DAFVTGEWGRA 99 (173)
T ss_dssp SSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHT---TTCCEEEEEES-S-----CHHHHHHHHHH
T ss_pred CCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHh---CCCEEEEEEcC-C-----CHHHHHHHHHH
Confidence 45677899999 5999666555 599997765 46788 9999984 4699998 885 3 23455667543
Q ss_pred hcCCC--eeeecCCCCCchHHHHHHHHhhCcC-------------CceEEEEeCCCCceeccc
Q 044391 394 QAMMP--WYTVQHPTIIEPAVVKYAKEVWKFS-------------KKAILVPVDPQGRILNQN 441 (691)
Q Consensus 394 ~~~MP--WyAVp~~d~i~~~~~r~ike~f~~~-------------~iP~LVvL~pqGkv~~~N 441 (691)
.. .| +-.+--++ . .+.+.|++. ..|...||| +|++....
T Consensus 100 ~~-~~~~fp~l~D~~---~----~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~ 153 (173)
T 3mng_A 100 HK-AEGKVRLLADPT---G----AFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALN 153 (173)
T ss_dssp TT-CTTTCEEEECTT---C----HHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred hC-CCCceEEEECCC---h----HHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEE
Confidence 32 22 32222222 2 233446654 459999999 99997654
No 111
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.04 E-value=0.00055 Score=61.54 Aligned_cols=72 Identities=4% Similarity=0.090 Sum_probs=48.9
Q ss_pred cceecCcEEEEEEecCCCChhhhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCC
Q 044391 329 IEVLRRKHVLLLISSLDLSDEEILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTI 407 (691)
Q Consensus 329 Is~L~gK~VlL~fSal~~~~~e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~ 407 (691)
++..+||.|+++|.+.||++|.. +. .++++.+. |.++++.+ |. |+
T Consensus 35 l~~~~~k~vvv~F~a~wC~~C~~--~~p~l~~l~~~----~~v~~~~v-d~-----~~---------------------- 80 (133)
T 3cxg_A 35 FSSTQNSSIVIKFGAVWCKPCNK--IKEYFKNQLNY----YYVTLVDI-DV-----DI---------------------- 80 (133)
T ss_dssp HTC-CCSEEEEEEECTTCHHHHH--THHHHHGGGGT----EECEEEEE-ET-----TT----------------------
T ss_pred HHhcCCCEEEEEEECCCCHHHHH--HHHHHHHHHHh----cCEEEEEE-ec-----cc----------------------
Confidence 44556899999999999998854 24 55555432 56777775 21 11
Q ss_pred CchHHHHHHHHhhCcCCceEEEEe-CCCCc--eec
Q 044391 408 IEPAVVKYAKEVWKFSKKAILVPV-DPQGR--ILN 439 (691)
Q Consensus 408 i~~~~~r~ike~f~~~~iP~LVvL-~pqGk--v~~ 439 (691)
...+.+.|++++.|+++++ +++|+ ++.
T Consensus 81 -----~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~ 110 (133)
T 3cxg_A 81 -----HPKLNDQHNIKALPTFEFYFNLNNEWVLVH 110 (133)
T ss_dssp -----CHHHHHHTTCCSSSEEEEEEEETTEEEEEE
T ss_pred -----hHHHHHhcCCCCCCEEEEEEecCCCeEEEE
Confidence 1235567999999999999 56666 553
No 112
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.03 E-value=0.0013 Score=55.11 Aligned_cols=67 Identities=13% Similarity=0.081 Sum_probs=49.2
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.||.|+++|.+.||++|.- +.|. +.++.+ +++.++.|.+ |++
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~----~~v~~~~v~~--------~~~----------------------- 60 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHA----DKVTVAKLNV--------DEN----------------------- 60 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHST----TTCEEEEEET--------TTC-----------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc----CCcEEEEEEC--------cCC-----------------------
Confidence 4789999999999988743 5566 666653 3477777754 221
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 61 ----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 85 (105)
T 1nsw_A 61 ----PETTSQFGIMSIPTLILF-KGGRPVK 85 (105)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----HHHHHHcCCccccEEEEE-eCCeEEE
Confidence 124567899999999999 8999764
No 113
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.03 E-value=0.0006 Score=59.70 Aligned_cols=76 Identities=7% Similarity=0.012 Sum_probs=50.3
Q ss_pred eecceecCcEEEEEEecCCCChhhh--HHH---H-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCee
Q 044391 327 VNIEVLRRKHVLLLISSLDLSDEEI--LVL---H-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWY 400 (691)
Q Consensus 327 V~Is~L~gK~VlL~fSal~~~~~e~--~~L---~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWy 400 (691)
+..+..+||.|+++|.+.||++|.- +.+ . +-+.++ .++.++-|.+ |.
T Consensus 20 ~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~----~~~~~~~vd~--------~~--------------- 72 (130)
T 2kuc_A 20 LKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFN----RHFVNLKMDM--------EK--------------- 72 (130)
T ss_dssp HHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHH----HHSEEEEECS--------SS---------------
T ss_pred HHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHh----cCeEEEEEec--------CC---------------
Confidence 4444568999999999999998853 334 3 333332 2244444321 21
Q ss_pred eecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 401 TVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 401 AVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+ ....+.+.|++.+.|+++++|++|+++.
T Consensus 73 -----~-----~~~~~~~~~~v~~~Pt~~~~d~~G~~~~ 101 (130)
T 2kuc_A 73 -----G-----EGVELRKKYGVHAYPTLLFINSSGEVVY 101 (130)
T ss_dssp -----T-----THHHHHHHTTCCSSCEEEEECTTSCEEE
T ss_pred -----c-----chHHHHHHcCCCCCCEEEEECCCCcEEE
Confidence 1 1234566799999999999999999875
No 114
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.01 E-value=0.0017 Score=54.22 Aligned_cols=67 Identities=12% Similarity=0.090 Sum_probs=50.1
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
++|.++++|.+.||++|.. +.|. ++++.+ +++.++.|.+ |++.
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~----~~~~~~~v~~--------~~~~---------------------- 63 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYE----GKADILKLDV--------DENP---------------------- 63 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTT----TTCEEEEEET--------TTCH----------------------
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhc----CCcEEEEEEC--------CcCH----------------------
Confidence 7999999999999988753 5677 777764 3377777754 2211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|++++.|+++++. +|+.+.
T Consensus 64 -----~~~~~~~v~~~Pt~~~~~-~G~~~~ 87 (106)
T 3die_A 64 -----STAAKYEVMSIPTLIVFK-DGQPVD 87 (106)
T ss_dssp -----HHHHHTTCCSBSEEEEEE-TTEEEE
T ss_pred -----HHHHhCCCcccCEEEEEe-CCeEEE
Confidence 245668999999999995 898764
No 115
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.01 E-value=0.0014 Score=57.35 Aligned_cols=70 Identities=4% Similarity=-0.140 Sum_probs=50.2
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.|+++|.+.||++|. .+.|. ++++++...+.++.++-|.+ |++
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~--------~~~----------------------- 72 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDA--------TVN----------------------- 72 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEET--------TTC-----------------------
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEEC--------CCC-----------------------
Confidence 378999999999998874 36688 88887632234566666643 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
+.+.+.|++++.|+++++++ |+.+
T Consensus 73 ----~~l~~~~~v~~~Pt~~~~~~-g~~~ 96 (133)
T 1x5d_A 73 ----QVLASRYGIRGFPTIKIFQK-GESP 96 (133)
T ss_dssp ----CHHHHHHTCCSSSEEEEEET-TEEE
T ss_pred ----HHHHHhCCCCeeCeEEEEeC-CCce
Confidence 13556689999999999998 7754
No 116
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=96.97 E-value=0.002 Score=54.54 Aligned_cols=67 Identities=15% Similarity=0.082 Sum_probs=50.2
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.||.++++|.+.||++|.. +.|. +.++.+ +++.++.|.+ |.+.
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~----~~v~~~~v~~--------~~~~---------------------- 69 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYS----DRLKVVKLEI--------DPNP---------------------- 69 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT----TTCEEEEEES--------TTCH----------------------
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhC----CcEEEEEEEc--------CCCH----------------------
Confidence 4899999999999998853 5566 666653 3488888865 2211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|++++.|+++++ ++|+++.
T Consensus 70 -----~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (115)
T 1thx_A 70 -----TTVKKYKVEGVPALRLV-KGEQILD 93 (115)
T ss_dssp -----HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHcCCCceeEEEEE-cCCEEEE
Confidence 25567899999999999 8999875
No 117
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.96 E-value=0.0017 Score=55.38 Aligned_cols=67 Identities=13% Similarity=0.190 Sum_probs=47.3
Q ss_pred CcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
||.|+++|.+.||++|.- +.|. ++++++. .++.++.|.+ |++
T Consensus 21 ~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~~vd~--------~~~------------------------ 65 (112)
T 3d6i_A 21 DKLIVLYFHTSWAEPCKALKQVFEAISNEPSN---SNVSFLSIDA--------DEN------------------------ 65 (112)
T ss_dssp TCCEEEEEECCC--CHHHHHHHHHHHHHCGGG---TTSEEEEEET--------TTC------------------------
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC---CCEEEEEEec--------ccC------------------------
Confidence 789999999999988743 5677 7776542 3477776654 211
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ .+|+++.
T Consensus 66 ---~~~~~~~~v~~~Pt~~~~-~~G~~~~ 90 (112)
T 3d6i_A 66 ---SEISELFEISAVPYFIII-HKGTILK 90 (112)
T ss_dssp ---HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ---HHHHHHcCCCcccEEEEE-ECCEEEE
Confidence 135567999999999998 6999875
No 118
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=96.95 E-value=0.0015 Score=55.02 Aligned_cols=67 Identities=12% Similarity=0.089 Sum_probs=48.8
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.||.|+++|.+.||++|.- +.|. +.++.+ .++.++-|.+ |.+ +
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~~v~~--------~~~------------------~---- 64 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQ----GKLTVAKLNI--------DQN------------------P---- 64 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTT----TTEEEEEEET--------TTC------------------T----
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhC----CCcEEEEEEC--------CCC------------------H----
Confidence 4799999999999988743 5677 776654 3466666654 211 1
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|++++.|+++++ ++|+++.
T Consensus 65 -----~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (108)
T 2trx_A 65 -----GTAPKYGIRGIPTLLLF-KNGEVAA 88 (108)
T ss_dssp -----THHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHcCCcccCEEEEE-eCCEEEE
Confidence 14466899999999999 8999864
No 119
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=96.91 E-value=0.0024 Score=53.25 Aligned_cols=67 Identities=9% Similarity=0.072 Sum_probs=49.2
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.++++|.+.||++|.- +.|. +.++++ +++.++.|.+ |.+
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~~v~~--------~~~----------------------- 61 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYE----GKLLVAKLDV--------DEN----------------------- 61 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTB----TTBEEEEEET--------TTC-----------------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhh----CceEEEEEEC--------CCC-----------------------
Confidence 4799999999999988753 5577 766654 3477766654 221
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++.+.|+++++ ++|+++.
T Consensus 62 ----~~~~~~~~v~~~Pt~~~~-~~g~~~~ 86 (109)
T 2yzu_A 62 ----PKTAMRYRVMSIPTVILF-KDGQPVE 86 (109)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----HhHHHhCCCCcCCEEEEE-eCCcEee
Confidence 125567899999999999 8999874
No 120
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=96.89 E-value=0.0028 Score=53.26 Aligned_cols=66 Identities=14% Similarity=0.016 Sum_probs=48.4
Q ss_pred CcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
||.++++|.+.||++|.- +.|. ++++.+ +++.++.|.+ |++
T Consensus 19 ~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~~v~~--------~~~------------------------ 62 (107)
T 1dby_A 19 SVPVLVDFWAPWCGPCRIIAPVVDEIAGEYK----DKLKCVKLNT--------DES------------------------ 62 (107)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT----TTCEEEEEET--------TTC------------------------
T ss_pred CCcEEEEEECCCCHhHHHHHHHHHHHHHHhC----CceEEEEEEC--------CCC------------------------
Confidence 789999999999988753 5677 777654 3477777654 211
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+.+.+.|++++.|+++++ ++|+.+.
T Consensus 63 ---~~~~~~~~v~~~Pt~~~~-~~G~~~~ 87 (107)
T 1dby_A 63 ---PNVASEYGIRSIPTIMVF-KGGKKCE 87 (107)
T ss_dssp ---HHHHHHHTCCSSCEEEEE-SSSSEEE
T ss_pred ---HHHHHHCCCCcCCEEEEE-eCCEEEE
Confidence 134566899999999888 7998864
No 121
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=96.87 E-value=0.0023 Score=53.51 Aligned_cols=67 Identities=13% Similarity=0.152 Sum_probs=49.6
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.|+++|.+.||++|.. +.|. +.++.+ +++.++.|.+ |.+ +
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~----~~~~~~~v~~--------~~~------------------~---- 64 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFA----GKVTVAKVNI--------DDN------------------P---- 64 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHT----TSEEEEEEET--------TTC------------------C----
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhC----CcEEEEEEEC--------CCC------------------H----
Confidence 4799999999999988753 5577 777664 3477777754 211 0
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|++++.|+++++ ++|+.+.
T Consensus 65 -----~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (107)
T 2i4a_A 65 -----ETPNAYQVRSIPTLMLV-RDGKVID 88 (107)
T ss_dssp -----HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHhcCCCccCEEEEE-eCCEEEE
Confidence 24566899999999999 9999864
No 122
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=96.85 E-value=0.0022 Score=53.47 Aligned_cols=68 Identities=12% Similarity=0.047 Sum_probs=48.7
Q ss_pred ecCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCC
Q 044391 332 LRRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTII 408 (691)
Q Consensus 332 L~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i 408 (691)
.+||.++++|.+.||++|.- +.|. +.++.+ .++.++.|.+ |+.
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~~v~~--------~~~---------------------- 63 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFA----DNVVVLKVDV--------DEC---------------------- 63 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT----TTEEEEEEET--------TTC----------------------
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC----CCeEEEEEec--------cch----------------------
Confidence 36899999999999988753 5566 666653 4577777654 211
Q ss_pred chHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 409 EPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 409 ~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+++.
T Consensus 64 -----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (106)
T 1xwb_A 64 -----EDIAMEYNISSMPTFVFL-KNGVKVE 88 (106)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHHcCCCcccEEEEE-cCCcEEE
Confidence 124566899999998777 7898764
No 123
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=96.85 E-value=0.0023 Score=54.30 Aligned_cols=67 Identities=16% Similarity=0.014 Sum_probs=49.2
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.||.|+++|.+.||++|.- +.|. ++++.+ +++.++.|.+ |.+
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~~v~~--------~~~----------------------- 66 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYG----DKIEIVKLNI--------DEN----------------------- 66 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT----TTCEEEEEET--------TTC-----------------------
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhc----CCeEEEEEEc--------CCC-----------------------
Confidence 3789999999999988743 5677 777654 3477777754 221
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 67 ----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 91 (112)
T 1t00_A 67 ----PGTAAKYGVMSIPTLNVY-QGGEVAK 91 (112)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----HHHHHhCCCCcccEEEEE-eCCEEEE
Confidence 124567899999999888 7998863
No 124
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.83 E-value=0.002 Score=64.35 Aligned_cols=67 Identities=10% Similarity=0.066 Sum_probs=51.7
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|. .+.|. ++++.+ +++.++.|.+ |+..
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~~vd~--------~~~~---------------------- 70 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPILESLAAQYN----GQFILAKLDC--------DAEQ---------------------- 70 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHT----SSSEEEEEET--------TTCH----------------------
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHHHHcC----CCeEEEEEeC--------ccCH----------------------
Confidence 389999999999998874 47788 888775 3477777754 2211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|+++++|+++++ .+|+++.
T Consensus 71 -----~~~~~~~v~~~Pt~~~~-~~G~~~~ 94 (287)
T 3qou_A 71 -----MIAAQFGLRAIPTVYLF-QNGQPVD 94 (287)
T ss_dssp -----HHHHTTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHcCCCCCCeEEEE-ECCEEEE
Confidence 45677999999999999 6898774
No 125
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=96.79 E-value=0.00038 Score=65.17 Aligned_cols=101 Identities=9% Similarity=0.060 Sum_probs=61.6
Q ss_pred eecceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeec
Q 044391 327 VNIEVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQ 403 (691)
Q Consensus 327 V~Is~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp 403 (691)
+.....+||.|+|+|.+.||++|. .+.|. +.+..+. +.+++.|.+ |.+.+.
T Consensus 39 ~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~----~~~~~~v~~--------d~~~~~-------------- 92 (164)
T 1sen_A 39 KKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL----SHNFVMVNL--------EDEEEP-------------- 92 (164)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH----HTTSEEEEE--------EGGGSC--------------
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc----CCeEEEEEe--------cCCchH--------------
Confidence 334456799999999999998874 36676 6544332 256777765 211110
Q ss_pred CCCCCchHHHHHHHHhhCc--CCceEEEEeCCCCceecccHHHHHHHhCcccccCChhhHHHHHhhhc
Q 044391 404 HPTIIEPAVVKYAKEVWKF--SKKAILVPVDPQGRILNQNAFHMLWIWGNLAFPFSAEKEAALWKAES 469 (691)
Q Consensus 404 ~~d~i~~~~~r~ike~f~~--~~iP~LVvL~pqGkv~~~NA~~mI~~wG~~AFPFT~~r~e~L~~~e~ 469 (691)
+.+.|++ ++.|+++++|++|+++.. ++-..|...|.|.....++|.+.-+
T Consensus 93 ------------~~~~~~~~~~~~Pt~~~~d~~G~~~~~----~~G~~~~~~~~~~~~~~~~l~~~l~ 144 (164)
T 1sen_A 93 ------------KDEDFSPDGGYIPRILFLDPSGKVHPE----IINENGNPSYKYFYVSAEQVVQGMK 144 (164)
T ss_dssp ------------SCGGGCTTCSCSSEEEEECTTSCBCTT----CCCTTSCTTSTTCCCSHHHHHHHHH
T ss_pred ------------HHHHhcccCCcCCeEEEECCCCCEEEE----EeCCCCccchhcccCCHHHHHHHHH
Confidence 0123456 569999999999999854 1222344455554445555554433
No 126
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=96.79 E-value=0.0028 Score=55.21 Aligned_cols=67 Identities=9% Similarity=0.083 Sum_probs=49.7
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.||.|+|+|.+.||++|.. +.|. ++++++ .++.++.|.+ |++
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~----~~v~~~~vd~--------d~~----------------------- 74 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQH----GKVVMAKVDI--------DDH----------------------- 74 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT----TSSEEEEEET--------TTT-----------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc----CCeEEEEEeC--------CCC-----------------------
Confidence 4789999999999988753 5577 776653 3577777754 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+++.
T Consensus 75 ----~~l~~~~~v~~~Pt~~~~-~~G~~~~ 99 (119)
T 1w4v_A 75 ----TDLAIEYEVSAVPTVLAM-KNGDVVD 99 (119)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----HHHHHHcCCCcccEEEEE-eCCcEEE
Confidence 135567999999999999 8999864
No 127
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=96.78 E-value=0.0042 Score=58.48 Aligned_cols=100 Identities=9% Similarity=0.050 Sum_probs=64.6
Q ss_pred ceeeccee-cCc-EEEEEEecCCCChh--h-hHHHH-HHHHhhccCCCCee-EEEEecccCCCCCChhhHHHHHHHhcC-
Q 044391 325 TRVNIEVL-RRK-HVLLLISSLDLSDE--E-ILVLH-LYREHKAREEFDYA-IVWLPIVDRSIAWDEGYRQKFEQLQAM- 396 (691)
Q Consensus 325 ~kV~Is~L-~gK-~VlL~fSal~~~~~--e-~~~L~-iY~~lk~~~~~~fE-IVwIpiVd~s~~W~D~d~~~F~~~~~~- 396 (691)
+.|.++++ +|| .|+++|=+.|||+| | ++-|. .|++++++ +++ ||-|+. | +....++|-+-..-
T Consensus 33 ~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~---g~~~vv~Is~-d-----~~~~~~~~~~~~~~~ 103 (171)
T 2pwj_A 33 STTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK---GVDSVICVAI-N-----DPYTVNAWAEKIQAK 103 (171)
T ss_dssp CCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT---TCSEEEEEES-S-----CHHHHHHHHHHTTCT
T ss_pred ceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC---CCCEEEEEeC-C-----CHHHHHHHHHHhCCC
Confidence 78999996 996 66778899999887 5 77799 99999743 588 999986 3 23445667654431
Q ss_pred CCeeeecCCCCCchHHHHHHHHhhCcCC-----------ceEEEEeCCCCceeccc
Q 044391 397 MPWYTVQHPTIIEPAVVKYAKEVWKFSK-----------KAILVPVDPQGRILNQN 441 (691)
Q Consensus 397 MPWyAVp~~d~i~~~~~r~ike~f~~~~-----------iP~LVvL~pqGkv~~~N 441 (691)
.|+..+--++ .+.. +.|++.. .|.-++++ +|++....
T Consensus 104 ~~fp~l~D~~---~~~~----~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~ 151 (171)
T 2pwj_A 104 DAIEFYGDFD---GSFH----KSLELTTDLSAGLLGIRSERWSAYVV-DGKVKALN 151 (171)
T ss_dssp TTSEEEECTT---CHHH----HHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEE
T ss_pred CceEEEECCc---cHHH----HHhCCccccccccCCcccceeEEEEE-CCEEEEEE
Confidence 1222222221 2333 3456642 45566667 99998653
No 128
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=95.81 E-value=0.00021 Score=62.80 Aligned_cols=75 Identities=9% Similarity=0.115 Sum_probs=50.7
Q ss_pred eeecceecCcEEEEEEecCCCChhhh--HHH---H-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCe
Q 044391 326 RVNIEVLRRKHVLLLISSLDLSDEEI--LVL---H-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPW 399 (691)
Q Consensus 326 kV~Is~L~gK~VlL~fSal~~~~~e~--~~L---~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPW 399 (691)
.+.....+||.|+++|.+.||++|.. +.| . +.+.+ +.++.++-|.+ |.++
T Consensus 11 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~----~~~~~~~~vd~--------~~~~------------ 66 (130)
T 2lst_A 11 ALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLL----EARFVVASVSV--------DTPE------------ 66 (130)
Confidence 45566678999999999999988853 444 4 44433 33466665543 1110
Q ss_pred eeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCC-Cce
Q 044391 400 YTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQ-GRI 437 (691)
Q Consensus 400 yAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pq-Gkv 437 (691)
...+.+.|++++.|+++++||+ |++
T Consensus 67 -------------~~~~~~~~~v~~~Pt~~~~d~~~G~~ 92 (130)
T 2lst_A 67 -------------GQELARRYRVPGTPTFVFLVPKAGAW 92 (130)
Confidence 1234566899999999999985 776
No 129
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=96.77 E-value=0.0035 Score=51.65 Aligned_cols=66 Identities=6% Similarity=-0.055 Sum_probs=48.2
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.- +.|. +.++++ + +.++.|.+ |.+
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~----~-~~~~~v~~--------~~~----------------------- 58 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYP----Q-VGFGKLNS--------DEN----------------------- 58 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----T-SEEEEEET--------TTC-----------------------
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcC----C-ceEEEEEC--------CCC-----------------------
Confidence 5899999999999988753 4566 665542 2 77777754 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+.+.
T Consensus 59 ----~~~~~~~~v~~~Pt~~~~-~~g~~~~ 83 (104)
T 2e0q_A 59 ----PDIAARYGVMSLPTVIFF-KDGEPVD 83 (104)
T ss_dssp ----HHHHHHTTCCSSCEEEEE-ETTEEEE
T ss_pred ----HHHHHhCCccccCEEEEE-ECCeEhh
Confidence 125566899999999999 8999864
No 130
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.76 E-value=0.0051 Score=52.92 Aligned_cols=68 Identities=13% Similarity=0.111 Sum_probs=47.2
Q ss_pred cCcEEEEEEecCCCChhhhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCchH
Q 044391 333 RRKHVLLLISSLDLSDEEILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEPA 411 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~~ 411 (691)
.+|.++++|.+.||++|.. +. .++++.+. -.++.++.|.+ |+.
T Consensus 18 ~~~~~vv~f~a~wC~~C~~--~~~~l~~~~~~-~~~v~~~~vd~--------~~~------------------------- 61 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKN--MEKVLDKFGAR-APQVAISSVDS--------EAR------------------------- 61 (110)
T ss_dssp TCSEEEEEEECSSCSTHHH--HHHHHHHHHTT-CTTSCEEEEEG--------GGC-------------------------
T ss_pred cCCCEEEEEECCCCHhHHH--HHHHHHHHHHH-CCCcEEEEEcC--------cCC-------------------------
Confidence 4789999999999999854 22 34444333 23566776653 221
Q ss_pred HHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 412 VVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 412 ~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+.+.
T Consensus 62 --~~l~~~~~v~~~Pt~~~~-~~G~~v~ 86 (110)
T 2l6c_A 62 --PELMKELGFERVPTLVFI-RDGKVAK 86 (110)
T ss_dssp --HHHHHHTTCCSSCEEEEE-ESSSEEE
T ss_pred --HHHHHHcCCcccCEEEEE-ECCEEEE
Confidence 125567899999999999 8999875
No 131
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=96.76 E-value=0.0031 Score=53.13 Aligned_cols=66 Identities=12% Similarity=0.128 Sum_probs=48.6
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.|+++|.+.||++|.. +.|. +.++.+ +++.++.|.+ |+..
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~----~~v~~~~vd~--------~~~~---------------------- 66 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYE----ESFGFYYVDV--------EEEK---------------------- 66 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTT----TTSEEEEEET--------TTCH----------------------
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcC----CceEEEEEEC--------CcCh----------------------
Confidence 3789999999999988753 5566 666643 3577777764 2111
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
.+.+.|++++.|+++++ .+|+.+
T Consensus 67 -----~l~~~~~v~~~Pt~~~~-~~g~~~ 89 (111)
T 3gnj_A 67 -----TLFQRFSLKGVPQILYF-KDGEYK 89 (111)
T ss_dssp -----HHHHHTTCCSSCEEEEE-ETTEEE
T ss_pred -----hHHHhcCCCcCCEEEEE-ECCEEE
Confidence 35567899999999999 788876
No 132
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.75 E-value=0.0021 Score=56.11 Aligned_cols=67 Identities=4% Similarity=-0.060 Sum_probs=48.6
Q ss_pred ecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCC
Q 044391 332 LRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTII 408 (691)
Q Consensus 332 L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i 408 (691)
++++ |+++|.+.||++|. .+.|. ++++++. .++.++-|.+ |++
T Consensus 21 ~~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~---~~v~~~~vd~--------~~~---------------------- 66 (126)
T 1x5e_A 21 LEGD-WMIEFYAPWCPACQNLQPEWESFAEWGED---LEVNIAKVDV--------TEQ---------------------- 66 (126)
T ss_dssp TSSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGG---GTCEEEEEET--------TTC----------------------
T ss_pred hCCC-EEEEEECCCCHHHHHHhHHHHHHHHHhcc---CCeEEEEEEC--------cCC----------------------
Confidence 4454 99999999998874 36788 8887653 3477777654 211
Q ss_pred chHHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 409 EPAVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 409 ~~~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
+.+.+.|++++.|+++++ ++|++.
T Consensus 67 -----~~~~~~~~v~~~Pt~~~~-~~G~~~ 90 (126)
T 1x5e_A 67 -----PGLSGRFIINALPTIYHC-KDGEFR 90 (126)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred -----HHHHHHcCCcccCEEEEE-eCCeEE
Confidence 125667999999999999 899853
No 133
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=96.75 E-value=0.0036 Score=52.29 Aligned_cols=67 Identities=9% Similarity=0.033 Sum_probs=48.9
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.- +.|. +.++.+ +++.++-|.+ |+..
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~----~~~~~~~v~~--------~~~~---------------------- 65 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYK----GKAVFGRLNV--------DENQ---------------------- 65 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTT----TTSEEEEEET--------TTCH----------------------
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhC----CCceEEEEcc--------ccCH----------------------
Confidence 4899999999999988753 5677 777654 3466666543 2111
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|++++.|+++++ ++|+.+.
T Consensus 66 -----~~~~~~~i~~~Pt~~~~-~~g~~~~ 89 (109)
T 3tco_A 66 -----KIADKYSVLNIPTTLIF-VNGQLVD 89 (109)
T ss_dssp -----HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHhcCcccCCEEEEE-cCCcEEE
Confidence 24566899999999999 9998775
No 134
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=96.74 E-value=0.002 Score=54.14 Aligned_cols=71 Identities=7% Similarity=-0.031 Sum_probs=46.7
Q ss_pred ecCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCC
Q 044391 332 LRRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTII 408 (691)
Q Consensus 332 L~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i 408 (691)
+.+|.++++|.+.||++|.. +.|. +.++.+.. ..++.++-|.+ |+..
T Consensus 19 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~~~~vd~--------~~~~--------------------- 68 (111)
T 3uvt_A 19 IAEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPG-LAGVKIAEVDC--------TAER--------------------- 68 (111)
T ss_dssp HHSSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC--CCEEEEEEET--------TTCH---------------------
T ss_pred hcCCcEEEEEECCCChhHHHhhHHHHHHHHHhhcc-CCceEEEEEec--------cccH---------------------
Confidence 34899999999999988753 4455 55444322 23455555543 2111
Q ss_pred chHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 409 EPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 409 ~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|++++.|+++++ ++|+.+.
T Consensus 69 ------~l~~~~~v~~~Pt~~~~-~~g~~~~ 92 (111)
T 3uvt_A 69 ------NICSKYSVRGYPTLLLF-RGGKKVS 92 (111)
T ss_dssp ------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ------hHHHhcCCCcccEEEEE-eCCcEEE
Confidence 25667899999999998 7887753
No 135
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=96.73 E-value=0.0071 Score=60.87 Aligned_cols=104 Identities=5% Similarity=0.048 Sum_probs=65.9
Q ss_pred cCCCCceeecceecCcEEEEEEecCC-CChhhh-HH---HHHHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHh
Q 044391 320 DGSSRTRVNIEVLRRKHVLLLISSLD-LSDEEI-LV---LHLYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQ 394 (691)
Q Consensus 320 ~g~~~~kV~Is~L~gK~VlL~fSal~-~~~~e~-~~---L~iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~ 394 (691)
...++..|++++++||.|+|+|=..| ||+|.. -+ +.-|+++ . .+++||-||. | +....++|-+-.
T Consensus 34 ~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~-~gv~VvgIS~-D-----s~~~~~~f~~~~ 103 (224)
T 3keb_A 34 VDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W-PHLKLIVITV-D-----SPSSLARARHEH 103 (224)
T ss_dssp EETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C-TTSEEEEEES-S-----CHHHHHHHHHHH
T ss_pred ECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c-CCCEEEEEEC-C-----CHHHHHHHHHHc
Confidence 34567789999999999999998777 666761 11 1223332 1 4589999995 4 244566776544
Q ss_pred c--CCCeeeecCCCCCchHHHHHHHHhhCcCC---------ceEEEEeCCCCceeccc
Q 044391 395 A--MMPWYTVQHPTIIEPAVVKYAKEVWKFSK---------KAILVPVDPQGRILNQN 441 (691)
Q Consensus 395 ~--~MPWyAVp~~d~i~~~~~r~ike~f~~~~---------iP~LVvL~pqGkv~~~N 441 (691)
. .+|-++=+- + ..+.+.|++.. .|..+|||++|++....
T Consensus 104 gl~~fplLsD~~-~-------~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~ 153 (224)
T 3keb_A 104 GLPNIALLSTLR-G-------RDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSE 153 (224)
T ss_dssp CCTTCEEEESTT-C-------TTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEE
T ss_pred CCCCceEEEcCC-c-------hHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEE
Confidence 3 233332211 1 12334477753 79999999999998644
No 136
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.73 E-value=0.0031 Score=55.84 Aligned_cols=69 Identities=10% Similarity=0.038 Sum_probs=50.0
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.|+++|.+.||++|. .+.|. ++++++.+ +.++.++-|-+ +++
T Consensus 33 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~v~~~~vd~--------~~~----------------------- 80 (140)
T 2dj1_A 33 DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDN-DPPIAVAKIDA--------TSA----------------------- 80 (140)
T ss_dssp TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSS-SSCCEEEEECT--------TTC-----------------------
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhcc-CCceEEEEEeC--------ccc-----------------------
Confidence 489999999999998874 46788 99888744 33455555422 110
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
..+.+.|++++.|+++++ .+|++.
T Consensus 81 ----~~~~~~~~v~~~Pt~~~~-~~G~~~ 104 (140)
T 2dj1_A 81 ----SMLASKFDVSGYPTIKIL-KKGQAV 104 (140)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred ----HHHHHHCCCCccCeEEEE-ECCcEE
Confidence 235667999999999999 789843
No 137
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=96.70 E-value=0.0036 Score=54.52 Aligned_cols=66 Identities=9% Similarity=0.088 Sum_probs=46.7
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.- +.|. ++++.+ ++.++-|.+ |+.
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-----~v~~~~vd~--------d~~----------------------- 73 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS-----NVIFLEVDV--------DDC----------------------- 73 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT-----TSEEEEEET--------TTT-----------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----CCEEEEEEC--------CCC-----------------------
Confidence 6899999999999988753 4455 554432 266666543 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ .+|+.+.
T Consensus 74 ----~~l~~~~~v~~~Pt~~~~-~~G~~~~ 98 (116)
T 3qfa_C 74 ----QDVASECEVKSMPTFQFF-KKGQKVG 98 (116)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-SSSSEEE
T ss_pred ----HHHHHHcCCccccEEEEE-eCCeEEE
Confidence 135567899999999999 7898764
No 138
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=96.69 E-value=0.0035 Score=53.01 Aligned_cols=66 Identities=2% Similarity=-0.097 Sum_probs=47.7
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.. +.|. +.++. .++.++.|.+ |+.
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-----~~~~~~~vd~--------~~~----------------------- 63 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-----PQAVFLEVDV--------HQC----------------------- 63 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-----TTSEEEEEET--------TTS-----------------------
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHC-----CCcEEEEEEC--------ccC-----------------------
Confidence 4899999999999988743 5566 66554 2466666654 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+.+.+.|++++.|+++++ .+|+.+.
T Consensus 64 ----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (107)
T 1gh2_A 64 ----QGTAATNNISATPTFQFF-RNKVRID 88 (107)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----HHHHHhcCCCcccEEEEE-ECCeEEE
Confidence 225567899999999999 7898764
No 139
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=96.69 E-value=0.0038 Score=54.43 Aligned_cols=66 Identities=8% Similarity=0.056 Sum_probs=47.7
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.. +.|. ++++.+ + +.++.|.+ |++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~---~--v~~~~vd~--------~~~----------------------- 72 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYP---D--VRFVKCDV--------DES----------------------- 72 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCT---T--SEEEEEET--------TTC-----------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---C--CEEEEEEC--------CCC-----------------------
Confidence 4899999999999988753 5677 766643 2 66666653 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+++.
T Consensus 73 ----~~l~~~~~v~~~Pt~~~~-~~G~~~~ 97 (114)
T 2oe3_A 73 ----PDIAKECEVTAMPTFVLG-KDGQLIG 97 (114)
T ss_dssp ----HHHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred ----HHHHHHCCCCcccEEEEE-eCCeEEE
Confidence 125567899999999887 8999864
No 140
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.67 E-value=0.031 Score=53.50 Aligned_cols=151 Identities=9% Similarity=-0.019 Sum_probs=80.6
Q ss_pred ecCcEEEEEEecC-CCChhhhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 332 LRRKHVLLLISSL-DLSDEEILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 332 L~gK~VlL~fSal-~~~~~e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
++++.++++|++. ||++|. .+. +++++.+. .+++.++.|-+ |. .
T Consensus 20 ~~~~v~lv~f~~~~~C~~C~--~~~~~~~~la~~-~~~v~~~~vd~--------~~--~--------------------- 65 (226)
T 1a8l_A 20 MVNPVKLIVFVRKDHCQYCD--QLKQLVQELSEL-TDKLSYEIVDF--------DT--P--------------------- 65 (226)
T ss_dssp CCSCEEEEEEECSSSCTTHH--HHHHHHHHHHTT-CTTEEEEEEET--------TS--H---------------------
T ss_pred cCCCeEEEEEecCCCCchhH--HHHHHHHHHHhh-CCceEEEEEeC--------CC--c---------------------
Confidence 4567889999999 999874 345 66666543 45566666532 11 0
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceecccHHHHHHHhCcccccCChhhHHHHHhhhccchhhhcccCchhh-hhhhc
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILNQNAFHMLWIWGNLAFPFSAEKEAALWKAESWRLELLIDDIDATI-LEWMK 488 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~NA~~mI~~wG~~AFPFT~~r~e~L~~~e~w~lelLvd~id~~I-~~~i~ 488 (691)
.-+.+.+.|++++.|+++++ .+|+.... .-.|. |- .....++-.... ....-...++... ....+
T Consensus 66 --~~~~~~~~~~v~~~Pt~~~~-~~g~~~~~------~~~G~---~~-~~~l~~~l~~~l-~~~~~~~~l~~~~~~~~~~ 131 (226)
T 1a8l_A 66 --EGKELAKRYRIDRAPATTIT-QDGKDFGV------RYFGL---PA-GHEFAAFLEDIV-DVSREETNLMDETKQAIRN 131 (226)
T ss_dssp --HHHHHHHHTTCCSSSEEEEE-ETTBCCSE------EEESC---CC-TTHHHHHHHHHH-HHHHTCCCCCHHHHHHHTT
T ss_pred --ccHHHHHHcCCCcCceEEEE-cCCceeeE------EEecc---Cc-HHHHHHHHHHHH-hhcCCCCCCCHHHHHHHHh
Confidence 11235567899999999999 34542110 00121 11 111111110000 0000000123322 22233
Q ss_pred -CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhC----CceeeEEeccc
Q 044391 489 -EERYICLYGGGDI-EWIRRFTTSAKAVARAAQ----INLGMAYVGKN 530 (691)
Q Consensus 489 -egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~----~~~E~v~Vgkd 530 (691)
.++.++++|.+.+ ..|+++.+.+.++++... ..+.++.|.-+
T Consensus 132 ~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~ 179 (226)
T 1a8l_A 132 IDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAI 179 (226)
T ss_dssp CCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGG
T ss_pred cCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcc
Confidence 3455488888833 334999999999977643 46777777655
No 141
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=96.67 E-value=0.0031 Score=55.16 Aligned_cols=69 Identities=13% Similarity=0.123 Sum_probs=45.5
Q ss_pred cCcEEEEEEecCCCChhhhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCchH
Q 044391 333 RRKHVLLLISSLDLSDEEILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEPA 411 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~~ 411 (691)
.+|.|++.|.|.||++|.. +. .++++.+. -.+ ++|+-+ |- |+.
T Consensus 19 ~~k~vvv~F~a~wC~~C~~--~~p~~~~~~~~-~~~--~~~~~v-d~-----d~~------------------------- 62 (105)
T 3zzx_A 19 GNKLVVIDFYATWCGPCKM--IAPKLEELSQS-MSD--VVFLKV-DV-----DEC------------------------- 62 (105)
T ss_dssp TTSEEEEEEECTTCHHHHH--HHHHHHHHHHH-CTT--EEEEEE-ET-----TTC-------------------------
T ss_pred CCCEEEEEEECCCCCCccC--CCcchhhhhhc-cCC--eEEEEE-ec-----ccC-------------------------
Confidence 3789999999999999853 33 44444333 223 555554 21 211
Q ss_pred HHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 412 VVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 412 ~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
..|.+.|++++.|+++++ .+|+.+..
T Consensus 63 --~~l~~~~~V~~~PT~~~~-~~G~~v~~ 88 (105)
T 3zzx_A 63 --EDIAQDNQIACMPTFLFM-KNGQKLDS 88 (105)
T ss_dssp --HHHHHHTTCCBSSEEEEE-ETTEEEEE
T ss_pred --HHHHHHcCCCeecEEEEE-ECCEEEEE
Confidence 125667999999999888 68988753
No 142
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=96.66 E-value=0.0029 Score=53.67 Aligned_cols=66 Identities=8% Similarity=0.070 Sum_probs=41.7
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.|+++|.+.||++|.. +.|. +.++. .++.++-|.+ |+..
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~-----~~~~~~~vd~--------~~~~---------------------- 61 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENY-----NYVEKIEILL--------QDMQ---------------------- 61 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTC-----TTEEEEEEEE--------CCC-----------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHc-----CCceEEEEEC--------CCCH----------------------
Confidence 4899999999999988754 5566 55543 2466666654 2111
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|++++.|+++++. +|+.+.
T Consensus 62 -----~l~~~~~v~~~Pt~~~~~-~G~~~~ 85 (105)
T 4euy_A 62 -----EIAGRYAVFTGPTVLLFY-NGKEIL 85 (105)
T ss_dssp -------------CCCCEEEEEE-TTEEEE
T ss_pred -----HHHHhcCCCCCCEEEEEe-CCeEEE
Confidence 244568999999999995 898874
No 143
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.65 E-value=0.0043 Score=54.85 Aligned_cols=66 Identities=11% Similarity=0.173 Sum_probs=47.3
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.. +.|. ++++.+ ++.++.|.+ |++
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-----~v~~~~vd~--------d~~----------------------- 80 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-----NVLFLKVDT--------DEL----------------------- 80 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-----SEEEEEEET--------TTS-----------------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----CcEEEEEEC--------ccC-----------------------
Confidence 5899999999999988743 5566 666542 455555543 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+++.
T Consensus 81 ----~~l~~~~~v~~~Pt~~~~-~~G~~~~ 105 (124)
T 1xfl_A 81 ----KSVASDWAIQAMPTFMFL-KEGKILD 105 (124)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----HHHHHHcCCCccCEEEEE-ECCEEEE
Confidence 135567899999999888 8999874
No 144
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=96.64 E-value=0.0041 Score=53.82 Aligned_cols=70 Identities=11% Similarity=0.109 Sum_probs=49.8
Q ss_pred CcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
||.|+++|.+.||++|. .+.|. ++++.+ .+|+++-+ + ...+ .
T Consensus 29 ~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~------~~v~~~~~-~-----~~~~-----------------------~ 73 (118)
T 1zma_A 29 KETATFFIGRKTCPYCRKFAGTLSGVVAETK------AHIYFINS-E-----EPSQ-----------------------L 73 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHHC------CCCEEEET-T-----CGGG-----------------------H
T ss_pred CCeEEEEEECCCCccHHHHHHHHHHHHHhcC------CeEEEEEC-C-----CcCc-----------------------H
Confidence 78899999999998874 36788 777653 35777765 1 0111 1
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
...+.+.+.|++++.|+++++. +|+.+.
T Consensus 74 ~~~~~~~~~~~i~~~Pt~~~~~-~G~~~~ 101 (118)
T 1zma_A 74 NDLQAFRSRYGIPTVPGFVHIT-DGQINV 101 (118)
T ss_dssp HHHHHHHHHHTCCSSCEEEEEE-TTEEEE
T ss_pred HHHHHHHHHcCCCCCCeEEEEE-CCEEEE
Confidence 2234567789999999999994 888763
No 145
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=96.62 E-value=0.0026 Score=55.69 Aligned_cols=65 Identities=14% Similarity=0.070 Sum_probs=48.0
Q ss_pred CcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
||.|+++|.+.||++|.. +.|. +++++ .++.++.|.+ |+.
T Consensus 23 ~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-----~~v~~~~vd~--------~~~------------------------ 65 (118)
T 2f51_A 23 PGLVLVDFFATWCGPCQRLGQILPSIAEAN-----KDVTFIKVDV--------DKN------------------------ 65 (118)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHC-----TTSEEEEEET--------TTC------------------------
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHC-----CCeEEEEEEC--------CCC------------------------
Confidence 899999999999988753 5566 66664 3477777754 221
Q ss_pred HHHHHHHHhhCcCCceEEEEeCC---CCcee
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDP---QGRIL 438 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~p---qGkv~ 438 (691)
..+.+.|++++.|+++++++ +|+++
T Consensus 66 ---~~~~~~~~i~~~Pt~~~~~~~~~~G~~~ 93 (118)
T 2f51_A 66 ---GNAADAYGVSSIPALFFVKKEGNEIKTL 93 (118)
T ss_dssp ---HHHHHHTTCCSSSEEEEEEEETTEEEEE
T ss_pred ---HHHHHhcCCCCCCEEEEEeCCCCcceEE
Confidence 12567799999999999987 47765
No 146
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.62 E-value=0.0057 Score=53.38 Aligned_cols=64 Identities=3% Similarity=-0.206 Sum_probs=47.9
Q ss_pred CcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
+|.|+++|.+.||++|. .+.|. ++++++ +.+.++.|.+ |+.
T Consensus 35 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~~vd~--------~~~------------------------ 78 (130)
T 2dml_A 35 DGLWLVEFYAPWCGHCQRLTPEWKKAATALK----DVVKVGAVNA--------DKH------------------------ 78 (130)
T ss_dssp SSCEEEEEECTTCSTTGGGHHHHHHHHHHTT----TTSEEEEEET--------TTC------------------------
T ss_pred CCeEEEEEECCCCHHHHhhCHHHHHHHHHhc----CceEEEEEeC--------CCC------------------------
Confidence 78999999999998874 36677 777764 2366666643 211
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCc
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGR 436 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGk 436 (691)
+.+.+.|++++.|++++++++|+
T Consensus 79 ---~~l~~~~~v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 79 ---QSLGGQYGVQGFPTIKIFGANKN 101 (130)
T ss_dssp ---HHHHHHHTCCSSSEEEEESSCTT
T ss_pred ---HHHHHHcCCCccCEEEEEeCCCC
Confidence 13556689999999999999987
No 147
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=96.61 E-value=0.0019 Score=57.56 Aligned_cols=67 Identities=12% Similarity=0.104 Sum_probs=49.3
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.|+++|.+.||++|.. +.|. ++++++ +++.++.|.+ |++ +
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----~~v~~~~vd~--------~~~------------------~---- 84 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQ----GKLTVAKLNI--------DQN------------------P---- 84 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTT----TTEEEEEEET--------TTC------------------C----
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc----CCeEEEEEEC--------CCC------------------H----
Confidence 4899999999999988743 5677 776654 3477777754 211 1
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|++++.|+++++ ++|+++.
T Consensus 85 -----~l~~~~~v~~~Pt~~~~-~~G~~~~ 108 (128)
T 2o8v_B 85 -----GTAPKYGIRGIPTLLLF-KNGEVAA 108 (128)
T ss_dssp -----TTSGGGTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHcCCCccCEEEEE-eCCEEEE
Confidence 13456899999999999 8999864
No 148
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=96.58 E-value=0.0051 Score=51.16 Aligned_cols=66 Identities=11% Similarity=-0.000 Sum_probs=47.8
Q ss_pred CcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
+|.++++|.+.||++|.- +.|. ++++++ +++.++.|.+ |++
T Consensus 18 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~----~~~~~~~v~~--------~~~------------------------ 61 (105)
T 1fb6_A 18 EVPVMVDFWAPWCGPCKLIAPVIDELAKEYS----GKIAVYKLNT--------DEA------------------------ 61 (105)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT----TTCEEEEEET--------TTC------------------------
T ss_pred CCcEEEEEECCCChHHHHHHHHHHHHHHHhc----CceEEEEEcC--------cch------------------------
Confidence 789999999999988743 5677 776654 3466666653 211
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+.+.
T Consensus 62 ---~~~~~~~~v~~~Pt~~~~-~~g~~~~ 86 (105)
T 1fb6_A 62 ---PGIATQYNIRSIPTVLFF-KNGERKE 86 (105)
T ss_dssp ---HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ---HHHHHhCCCCcccEEEEE-eCCeEEE
Confidence 135567899999998888 7998764
No 149
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=96.58 E-value=0.0044 Score=53.21 Aligned_cols=66 Identities=9% Similarity=0.051 Sum_probs=47.6
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+|+|.+.||++|.. +.|. ++++.+ ++.++-|.+ |+.
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-----~~~~~~vd~--------~~~----------------------- 66 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-----QADFYKLDV--------DEL----------------------- 66 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----TSEEEEEET--------TTC-----------------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-----CCEEEEEEC--------CCC-----------------------
Confidence 3899999999999988743 5677 766642 355665543 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|++++++ +|+.+.
T Consensus 67 ----~~l~~~~~v~~~Pt~~~~~-~G~~~~ 91 (109)
T 3f3q_A 67 ----GDVAQKNEVSAMPTLLLFK-NGKEVA 91 (109)
T ss_dssp ----HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred ----HHHHHHcCCCccCEEEEEE-CCEEEE
Confidence 2255679999999999998 898764
No 150
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=96.56 E-value=0.0044 Score=52.41 Aligned_cols=66 Identities=8% Similarity=0.036 Sum_probs=47.9
Q ss_pred CcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
||.|+++|.+.||++|.- +.|. ++++.+ +++.++.|.+ |.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~~vd~--------~~------------------------- 66 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYA----GKVIFLKVDV--------DA------------------------- 66 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTT----TTSEEEEEET--------TT-------------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC----CCeEEEEEEC--------Cc-------------------------
Confidence 889999999999988753 5577 766653 3577777653 21
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
...+.+.|++++.|+++++ ++|+++.
T Consensus 67 --~~~~~~~~~v~~~Pt~~~~-~~G~~~~ 92 (112)
T 1ep7_A 67 --VAAVAEAAGITAMPTFHVY-KDGVKAD 92 (112)
T ss_dssp --THHHHHHHTCCBSSEEEEE-ETTEEEE
T ss_pred --hHHHHHHcCCCcccEEEEE-ECCeEEE
Confidence 1234566899999998877 7999864
No 151
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.55 E-value=0.0043 Score=56.72 Aligned_cols=66 Identities=14% Similarity=0.105 Sum_probs=48.6
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.- +.|. ++++. .++.++-|.+ |+.
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-----~~v~~~~vd~--------~~~----------------------- 74 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKEL-----PQVSFVKLEA--------EGV----------------------- 74 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-----TTSEEEEEET--------TTS-----------------------
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHc-----CCeEEEEEEC--------CCC-----------------------
Confidence 3899999999999988743 5566 66653 3466776654 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+.+.+.|++++.|++++++ +|+++.
T Consensus 75 ----~~l~~~~~v~~~Pt~~~~~-~G~~~~ 99 (153)
T 2wz9_A 75 ----PEVSEKYEISSVPTFLFFK-NSQKID 99 (153)
T ss_dssp ----HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred ----HHHHHHcCCCCCCEEEEEE-CCEEEE
Confidence 1355679999999999999 999874
No 152
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=96.49 E-value=0.0042 Score=52.89 Aligned_cols=68 Identities=12% Similarity=0.015 Sum_probs=46.9
Q ss_pred ecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCC
Q 044391 332 LRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTII 408 (691)
Q Consensus 332 L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i 408 (691)
.+||.|+++|.+.||++|. .+.|. ++++.+ ++.++.|.+ ++.
T Consensus 22 ~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-----~v~~~~vd~-------~~~----------------------- 66 (111)
T 2pu9_C 22 AGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-----DVIFLKLDC-------NQE----------------------- 66 (111)
T ss_dssp CTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----TSEEEEEEC-------SST-----------------------
T ss_pred cCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-----CeEEEEEec-------Ccc-----------------------
Confidence 3689999999999998874 35677 776643 355555543 111
Q ss_pred chHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 409 EPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 409 ~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
...+.+.|++++.|++ +++++|+++.
T Consensus 67 ----~~~~~~~~~v~~~Pt~-~~~~~G~~~~ 92 (111)
T 2pu9_C 67 ----NKTLAKELGIRVVPTF-KILKENSVVG 92 (111)
T ss_dssp ----THHHHHHHCCSBSSEE-EEESSSSEEE
T ss_pred ----hHHHHHHcCCCeeeEE-EEEeCCcEEE
Confidence 1235566899999995 5569999864
No 153
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=96.46 E-value=0.0043 Score=53.59 Aligned_cols=66 Identities=8% Similarity=-0.118 Sum_probs=48.7
Q ss_pred CcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
+|.|+++|.+.||++|.- +.|. ++++++. ++.++-|.+ |+..
T Consensus 21 ~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~----~~~~~~vd~--------~~~~----------------------- 65 (122)
T 3aps_A 21 KTHWVVDFYAPWCGPCQNFAPEFELLARMIKG----KVRAGKVDC--------QAYP----------------------- 65 (122)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT----TCEEEEEET--------TTCH-----------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC----CeEEEEEeC--------cCCH-----------------------
Confidence 789999999999988743 6677 7777652 466666654 2111
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
.+.+.|++++.|++++++++|++.
T Consensus 66 ----~~~~~~~v~~~Pt~~~~~~~~~~~ 89 (122)
T 3aps_A 66 ----QTCQKAGIKAYPSVKLYQYERAKK 89 (122)
T ss_dssp ----HHHHHTTCCSSSEEEEEEEEGGGT
T ss_pred ----HHHHHcCCCccceEEEEeCCCccc
Confidence 245679999999999999888743
No 154
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.46 E-value=0.028 Score=64.35 Aligned_cols=144 Identities=13% Similarity=0.010 Sum_probs=85.8
Q ss_pred ceecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCC
Q 044391 330 EVLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPT 406 (691)
Q Consensus 330 s~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d 406 (691)
+.+.||.|++.|.+.||++|. .+.|. ++++++ +++.++.|.. |+..
T Consensus 451 ~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~----~~v~~~~vd~--------~~~~------------------- 499 (780)
T 3apo_A 451 PASDKEPWLVDFFAPWSPPSRALLPELRKASTLLY----GQLKVGTLDC--------TIHE------------------- 499 (780)
T ss_dssp CTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTT----TTCEEEEEET--------TTCH-------------------
T ss_pred HHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhc----CCeEEEEEeC--------CCCH-------------------
Confidence 344899999999999998874 46677 877775 3466777653 2111
Q ss_pred CCchHHHHHHHHhhCcCCceEEEEeCCCCceecccHHHHHHHhCcccccCChhhHHHHHhhhccchhhhcccCch-hhhh
Q 044391 407 IIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQNAFHMLWIWGNLAFPFSAEKEAALWKAESWRLELLIDDIDA-TILE 485 (691)
Q Consensus 407 ~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~NA~~mI~~wG~~AFPFT~~r~e~L~~~e~w~lelLvd~id~-~I~~ 485 (691)
.+.+.|++++.|++++++ +|+..... | +++.+.+.+.-++-.- ..+. .++. ...+
T Consensus 500 --------~~~~~~~v~~~Pt~~~~~-~g~~~~~~--------g----~~~~~~l~~fi~~~~~--~~v~-~l~~~~f~~ 555 (780)
T 3apo_A 500 --------GLCNMYNIQAYPTTVVFN-QSSIHEYE--------G----HHSAEQILEFIEDLRN--PSVV-SLTPSTFNE 555 (780)
T ss_dssp --------HHHHHTTCCSSSEEEEEE-TTEEEEEC--------S----CSCHHHHHHHHHHHHS--CSEE-ECCHHHHHH
T ss_pred --------HHHHHcCCCcCCeEEEEc-CCceeeec--------C----cccHHHHHHHHHhhcc--ccee-ecCcccHHH
Confidence 156679999999999994 47652211 2 2344333332221100 0011 1221 2233
Q ss_pred hhcC---CcEEEEEccCChhH---HHHHHHHHHHHHHHhCCceeeEEeccc
Q 044391 486 WMKE---ERYICLYGGGDIEW---IRRFTTSAKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 486 ~i~e---gK~I~LYgG~D~~W---ir~FT~~~~~Ik~~a~~~~E~v~Vgkd 530 (691)
.+.. ++..+++|.+ .| |+++.+.+.++|+..+..+-++.|..+
T Consensus 556 ~v~~~~~~~~~lv~F~a--p~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~ 604 (780)
T 3apo_A 556 LVKQRKHDEVWMVDFYS--PWSHPSQVLMPEWKRMARTLTGLINVGSVDCG 604 (780)
T ss_dssp HTTTCCTTCCEEEEEEC--TTCHHHHHHHHHHHHHHHHHTTTSEEEEEETT
T ss_pred HhhccCCCCeEEEEEEC--CCCHHHHHhhHHHHHHHHHhhCCeEEEEEECc
Confidence 4443 5666777777 67 688999999998875445555555443
No 155
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.45 E-value=0.0059 Score=54.42 Aligned_cols=68 Identities=12% Similarity=0.034 Sum_probs=47.9
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
++|.|+++|.+.||++|. .+.|. ++++.+ +.++.++.|-+ |+..
T Consensus 25 ~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~---~~~v~~~~vd~--------~~~~---------------------- 71 (137)
T 2dj0_A 25 KRVTWIVEFFANWSNDCQSFAPIYADLSLKYN---CTGLNFGKVDV--------GRYT---------------------- 71 (137)
T ss_dssp TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHC---SSSCEEEECCT--------TTCH----------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC---CCCeEEEEEeC--------ccCH----------------------
Confidence 356899999999998874 47788 888775 23566666533 2211
Q ss_pred hHHHHHHHHhhCcC------CceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFS------KKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~------~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|+++ +.|+++++ .+|+.+.
T Consensus 72 -----~~~~~~~v~~~~~~~~~Pt~~~~-~~G~~~~ 101 (137)
T 2dj0_A 72 -----DVSTRYKVSTSPLTKQLPTLILF-QGGKEAM 101 (137)
T ss_dssp -----HHHHHTTCCCCSSSSCSSEEEEE-SSSSEEE
T ss_pred -----HHHHHccCcccCCcCCCCEEEEE-ECCEEEE
Confidence 134557777 99999999 7899875
No 156
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=96.45 E-value=0.0026 Score=53.93 Aligned_cols=69 Identities=7% Similarity=-0.068 Sum_probs=48.5
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|. .+.+. ++++++.. +.++.++-|-+ ++ .+
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~v~~~~vd~--------~~------------------~~---- 71 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAE-GSEIRLAKVDA--------TE------------------ES---- 71 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTT-CCCCBCEEEET--------TT------------------CC----
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhcc-CCcEEEEEEcC--------CC------------------CH----
Confidence 589999999999998874 36788 88887643 34455554432 11 11
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
.+.+.|++++.|+++++ ++|+.+
T Consensus 72 -----~~~~~~~v~~~Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 72 -----DLAQQYGVRGYPTIKFF-RNGDTA 94 (120)
T ss_dssp -----SSHHHHTCCSSSEEEEE-ESSCSS
T ss_pred -----HHHHHCCCCcccEEEEE-eCCCcC
Confidence 23345799999999999 788865
No 157
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=96.45 E-value=0.0047 Score=54.84 Aligned_cols=67 Identities=10% Similarity=0.070 Sum_probs=49.2
Q ss_pred ecCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCC
Q 044391 332 LRRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTII 408 (691)
Q Consensus 332 L~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i 408 (691)
.+||.|+++|.+.||++|.- +.|. ++++. .++.++.|.+ |+.
T Consensus 44 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~-----~~v~~~~v~~--------~~~---------------------- 88 (139)
T 3d22_A 44 RDGKIVLANFSARWCGPSRQIAPYYIELSENY-----PSLMFLVIDV--------DEL---------------------- 88 (139)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHC-----TTSEEEEEET--------TTS----------------------
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-----CCCEEEEEeC--------ccc----------------------
Confidence 46999999999999988743 5566 66654 2466666653 211
Q ss_pred chHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 409 EPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 409 ~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+++.
T Consensus 89 -----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 113 (139)
T 3d22_A 89 -----SDFSASWEIKATPTFFFL-RDGQQVD 113 (139)
T ss_dssp -----HHHHHHTTCCEESEEEEE-ETTEEEE
T ss_pred -----HHHHHHcCCCcccEEEEE-cCCeEEE
Confidence 235567899999999988 8999874
No 158
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=96.44 E-value=0.0046 Score=51.58 Aligned_cols=66 Identities=9% Similarity=0.060 Sum_probs=46.5
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.- +.|. +.++.+ ++.++.|.+ |+.
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-----~~~~~~vd~--------~~~----------------------- 62 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS-----NVIFLEVDV--------DDC----------------------- 62 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHST-----TSEEEEEET--------TTC-----------------------
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHcc-----CeEEEEEEh--------hhh-----------------------
Confidence 5899999999999988743 4566 655442 256665543 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+.+.+.|++++.|+++++ .+|+.+.
T Consensus 63 ----~~~~~~~~v~~~Pt~~~~-~~g~~~~ 87 (105)
T 3m9j_A 63 ----QDVASESEVKSMPTFQFF-KKGQKVG 87 (105)
T ss_dssp ----HHHHHHTTCCBSSEEEEE-ETTEEEE
T ss_pred ----HHHHHHcCCCcCcEEEEE-ECCeEEE
Confidence 125567899999999999 7888764
No 159
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=96.44 E-value=0.0075 Score=63.17 Aligned_cols=105 Identities=10% Similarity=0.004 Sum_probs=66.4
Q ss_pred ceecCCCCceeecceecCcEEEEEEecC-CCChhhhHHHHHHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 317 PVVDGSSRTRVNIEVLRRKHVLLLISSL-DLSDEEILVLHLYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 317 ~l~~g~~~~kV~Is~L~gK~VlL~fSal-~~~~~e~~~L~iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+-+-+.+|+.|++++++||.|.|+|=-. ++|.|..- +.-|.+ .. .++++||=||. | +....+.|-+-.
T Consensus 7 F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e-~~~~~~--~~-~~~~~v~gis~-D-----~~~~~~~f~~~~- 75 (322)
T 4eo3_A 7 FELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTRE-AVEFSR--EN-FEKAQVVGISR-D-----SVEALKRFKEKN- 75 (322)
T ss_dssp CEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHH-HHHHHH--SC-CTTEEEEEEES-C-----CHHHHHHHHHHH-
T ss_pred cEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHH-HHHHHH--Hh-hCCCEEEEEeC-C-----CHHHHHHHHHhh-
Confidence 3344567889999999999999999422 34434322 122332 22 46799999985 5 355667786643
Q ss_pred CCCeeeecCCCCCchHHHHHHHHhhCcC----CceEEEEeCCCCceec
Q 044391 396 MMPWYTVQHPTIIEPAVVKYAKEVWKFS----KKAILVPVDPQGRILN 439 (691)
Q Consensus 396 ~MPWyAVp~~d~i~~~~~r~ike~f~~~----~iP~LVvL~pqGkv~~ 439 (691)
.+|+--+--++ ..+.+.|++- .+|+..++||+|++..
T Consensus 76 ~l~fp~l~D~~-------~~v~~~ygv~~~~~~~r~tfiId~~G~i~~ 116 (322)
T 4eo3_A 76 DLKVTLLSDPE-------GILHEFFNVLENGKTVRSTFLIDRWGFVRK 116 (322)
T ss_dssp TCCSEEEECTT-------CHHHHHTTCEETTEECCEEEEECTTSBEEE
T ss_pred CCceEEEEcCc-------hHHHHhcCCCCCCcCccEEEEECCCCEEEE
Confidence 34443332222 2345558873 4788999999999963
No 160
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=96.42 E-value=0.0068 Score=51.98 Aligned_cols=67 Identities=15% Similarity=0.141 Sum_probs=48.5
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.++++|.+.||++|.- +.|. +.++.+ .++.++.|.+ |+.
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~----~~~~~~~v~~--------~~~----------------------- 73 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERA----TDLTVAKLDV--------DTN----------------------- 73 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT----TTCEEEEEET--------TTC-----------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc----CCeEEEEEEC--------CCC-----------------------
Confidence 3789999999999988753 5566 666543 3577777764 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+++.
T Consensus 74 ----~~~~~~~~i~~~Pt~~~~-~~g~~~~ 98 (121)
T 2i1u_A 74 ----PETARNFQVVSIPTLILF-KDGQPVK 98 (121)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----HHHHHhcCCCcCCEEEEE-ECCEEEE
Confidence 124567899999999988 5998864
No 161
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.38 E-value=0.0069 Score=52.27 Aligned_cols=66 Identities=12% Similarity=0.160 Sum_probs=47.1
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.- +.|. ++++.+ ++.++.|.+ |++
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----~~~~~~vd~--------~~~----------------------- 76 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFP-----NAVFLKVDV--------DEL----------------------- 76 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----TSEEEEEET--------TTC-----------------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----CcEEEEEEC--------CCC-----------------------
Confidence 4899999999999988743 5566 666542 266666653 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+++.
T Consensus 77 ----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 101 (122)
T 2vlu_A 77 ----KPIAEQFSVEAMPTFLFM-KEGDVKD 101 (122)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----HHHHHHcCCCcccEEEEE-eCCEEEE
Confidence 134567899999998877 8999864
No 162
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=96.34 E-value=0.0033 Score=57.45 Aligned_cols=68 Identities=10% Similarity=-0.004 Sum_probs=50.0
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.||.|+++|.+.||++|. .+.|. ++++++ +++.++.|-+ |+. ++
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----~~v~~~~vd~--------d~~------------------~~--- 68 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVK----NFAVIYLVDI--------TEV------------------PD--- 68 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHT----TTEEEEEEET--------TTC------------------CT---
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC----CCeEEEEEcc--------ccC------------------HH---
Confidence 389999999999998874 36788 888764 3477777754 211 11
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
+.+.|++++.|+++++ .+|+.+..
T Consensus 69 ------~~~~~~i~~~Pt~~~~-~~G~~v~~ 92 (142)
T 1qgv_A 69 ------FNKMYELYDPCTVMFF-FRNKHIMI 92 (142)
T ss_dssp ------TTTSSCSCSSCEEEEE-ETTEEEEE
T ss_pred ------HHHHcCCCCCCEEEEE-ECCcEEEE
Confidence 3456899999999999 48888753
No 163
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=96.32 E-value=0.0065 Score=54.59 Aligned_cols=66 Identities=12% Similarity=0.056 Sum_probs=48.8
Q ss_pred CcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
+|.|+++|.+.||++|.- +.|. +.++++ +++.++.|-+ |+..
T Consensus 24 ~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~----~~v~~~~vd~--------~~~~----------------------- 68 (140)
T 3hz4_A 24 KKPVVVMFYSPACPYCKAMEPYFEEYAKEYG----SSAVFGRINI--------ATNP----------------------- 68 (140)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHT----TTSEEEEEET--------TTCH-----------------------
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhC----CceEEEEEEC--------CcCH-----------------------
Confidence 899999999999988743 5677 777764 2477777654 2111
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|++++.|+++++ .+|+.+.
T Consensus 69 ----~l~~~~~v~~~Pt~~~~-~~G~~~~ 92 (140)
T 3hz4_A 69 ----WTAEKYGVQGTPTFKFF-CHGRPVW 92 (140)
T ss_dssp ----HHHHHHTCCEESEEEEE-ETTEEEE
T ss_pred ----hHHHHCCCCcCCEEEEE-eCCcEEE
Confidence 25567899999999999 7898763
No 164
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.32 E-value=0.0095 Score=50.97 Aligned_cols=66 Identities=5% Similarity=-0.026 Sum_probs=47.3
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.- +.|. ++++.+ ++.++.|.+ |...
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-----~v~~~~vd~--------~~~~---------------------- 69 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-----KMVFIKVDV--------DEVS---------------------- 69 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-----TSEEEEEET--------TTTH----------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-----CCEEEEEEC--------CCCH----------------------
Confidence 5899999999999988743 5576 666542 366666653 2111
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|++.+.|+++++ .+|+++.
T Consensus 70 -----~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (112)
T 1syr_A 70 -----EVTEKENITSMPTFKVY-KNGSSVD 93 (112)
T ss_dssp -----HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHcCCCcccEEEEE-ECCcEEE
Confidence 34566899999998877 5898864
No 165
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.32 E-value=0.0064 Score=56.26 Aligned_cols=67 Identities=6% Similarity=-0.059 Sum_probs=50.1
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.|+++|.+.||++|.. +.|. ++++++. ++.++-|.+ |++
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~----~v~~~~vd~--------~~~----------------------- 107 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG----QVRLAKIDT--------QAH----------------------- 107 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT----TCEEEEEET--------TTS-----------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC----CEEEEEEeC--------Ccc-----------------------
Confidence 5899999999999988743 6688 8877752 366666653 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+++.
T Consensus 108 ----~~l~~~~~i~~~Pt~~~~-~~G~~~~ 132 (155)
T 2ppt_A 108 ----PAVAGRHRIQGIPAFILF-HKGRELA 132 (155)
T ss_dssp ----THHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----HHHHHHcCCCcCCEEEEE-eCCeEEE
Confidence 135667999999999999 7999864
No 166
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=96.32 E-value=0.0043 Score=57.13 Aligned_cols=65 Identities=12% Similarity=-0.023 Sum_probs=47.5
Q ss_pred CcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
+|.|++.|.+.||++|.. +.|. ++++++ +.+.++-|-+ |+.
T Consensus 23 ~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~----~~~~~~~vd~--------d~~------------------------ 66 (149)
T 3gix_A 23 EKVLVLRFGRDEDPVCLQLDDILSKTSSDLS----KMAAIYLVDV--------DQT------------------------ 66 (149)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHTTTT----TTEEEEEEET--------TTC------------------------
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHcc----CceEEEEEEC--------CcC------------------------
Confidence 899999999999988743 6677 776653 3366666543 211
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
..+.+.|++++.|+++ +..+|+.+
T Consensus 67 ---~~l~~~~~v~~~Pt~~-~~~~G~~v 90 (149)
T 3gix_A 67 ---AVYTQYFDISYIPSTV-FFFNGQHM 90 (149)
T ss_dssp ---CHHHHHTTCCSSSEEE-EEETTEEE
T ss_pred ---HHHHHHcCCCccCeEE-EEECCeEE
Confidence 1245678999999999 77899988
No 167
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.28 E-value=0.008 Score=53.51 Aligned_cols=66 Identities=5% Similarity=-0.007 Sum_probs=48.0
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
++|.|+++|.+.||++|.. +.|. ++++. .++.++.|.+ |++
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-----~~v~~~~vd~--------d~~----------------------- 79 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEF-----PTVKFAKVDA--------DNN----------------------- 79 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHC-----TTSEEEEEET--------TTC-----------------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHC-----CCCEEEEEEC--------CCC-----------------------
Confidence 4789999999999988743 5676 66664 2477777654 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+++.
T Consensus 80 ----~~l~~~~~v~~~Pt~~i~-~~G~~~~ 104 (125)
T 1r26_A 80 ----SEIVSKCRVLQLPTFIIA-RSGKMLG 104 (125)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----HHHHHHcCCCcccEEEEE-eCCeEEE
Confidence 125567899999998887 8998764
No 168
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.26 E-value=0.0056 Score=53.52 Aligned_cols=69 Identities=7% Similarity=0.018 Sum_probs=48.5
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.. +.|. ++++.+.+ ++.++.|.+ |..
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~---~v~~~~vd~--------d~~----------------------- 77 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD---KVGFYKVDV--------DEQ----------------------- 77 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH---HSEEEEEET--------TTC-----------------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC---cEEEEEEEC--------cCC-----------------------
Confidence 4889999999999998853 4566 66554421 377777754 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
..+.+.|++.+.|+++++ ++|+.+..
T Consensus 78 ----~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 103 (121)
T 2j23_A 78 ----SQIAQEVGIRAMPTFVFF-KNGQKIDT 103 (121)
T ss_dssp ----HHHHHHHTCCSSSEEEEE-ETTEEEEE
T ss_pred ----HHHHHHcCCCcccEEEEE-ECCeEEee
Confidence 124566899999999988 59988653
No 169
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=96.19 E-value=0.01 Score=50.51 Aligned_cols=66 Identities=9% Similarity=0.129 Sum_probs=46.6
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.- +.|. +.++.+ ++.++-|.+ |+.
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----~~~~~~v~~--------~~~----------------------- 70 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-----GAIFLKVDV--------DEL----------------------- 70 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----TSEEEEEET--------TTS-----------------------
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-----CcEEEEEEc--------ccC-----------------------
Confidence 4899999999999988753 5566 655542 456665543 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+.+.+.|++++.|+++++ ++|+.+.
T Consensus 71 ----~~~~~~~~v~~~Pt~~~~-~~g~~~~ 95 (118)
T 2vm1_A 71 ----KDVAEAYNVEAMPTFLFI-KDGEKVD 95 (118)
T ss_dssp ----HHHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred ----HHHHHHcCCCcCcEEEEE-eCCeEEE
Confidence 234567899999999988 7998764
No 170
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.19 E-value=0.0042 Score=54.47 Aligned_cols=68 Identities=12% Similarity=0.060 Sum_probs=47.3
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
++|.|+++|.+.||++|. .+.|. ++++++.+ .++.++.|-+ ++. +.
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~--~~~~~~~vd~--------~~~------------------~~--- 72 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ--KDLVIAKMDA--------TAN------------------DI--- 72 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS--SSEEEEEECT--------TTS------------------CC---
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC--CCEEEEEecC--------CcC------------------HH---
Confidence 489999999999999874 36788 88887632 3455554422 111 11
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCce
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRI 437 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv 437 (691)
+.+.|++++.|+++++++.|++
T Consensus 73 ------~~~~~~v~~~Pt~~~~~~g~~~ 94 (133)
T 2dj3_A 73 ------TNDQYKVEGFPTIYFAPSGDKK 94 (133)
T ss_dssp ------CCSSCCCSSSSEEEEECTTCTT
T ss_pred ------HHhhcCCCcCCEEEEEeCCCcc
Confidence 1235899999999999887754
No 171
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.18 E-value=0.01 Score=50.13 Aligned_cols=66 Identities=9% Similarity=0.253 Sum_probs=46.1
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.- +.|. +.++.+ ++.++.|.+ |+.
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----~v~~~~v~~--------~~~----------------------- 68 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-----NVTFLKVDV--------DEL----------------------- 68 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-----SEEEEEEET--------TTC-----------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-----CcEEEEEEc--------ccc-----------------------
Confidence 4899999999999988753 4566 555532 466666543 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+++.
T Consensus 69 ----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (113)
T 1ti3_A 69 ----KAVAEEWNVEAMPTFIFL-KDGKLVD 93 (113)
T ss_dssp ----HHHHHHHHCSSTTEEEEE-ETTEEEE
T ss_pred ----HHHHHhCCCCcccEEEEE-eCCEEEE
Confidence 124556899999999998 6998874
No 172
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=96.16 E-value=0.01 Score=53.48 Aligned_cols=68 Identities=6% Similarity=-0.017 Sum_probs=49.2
Q ss_pred ecCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCC
Q 044391 332 LRRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTII 408 (691)
Q Consensus 332 L~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i 408 (691)
-+||.|+++|.+.||++|.- +.|. ++++.+ .++.++-|.+ |++.
T Consensus 53 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~----~~~~~~~vd~--------~~~~--------------------- 99 (148)
T 3p2a_A 53 QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERA----GKVRFVKVNT--------EAEP--------------------- 99 (148)
T ss_dssp TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTT----TTCEEEEEET--------TTCH---------------------
T ss_pred hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcC----CceEEEEEEC--------cCCH---------------------
Confidence 45899999999999988743 5677 777654 3466666643 2111
Q ss_pred chHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 409 EPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 409 ~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.|++++.|+++++ .+|+.+.
T Consensus 100 ------~l~~~~~v~~~Pt~~~~-~~G~~~~ 123 (148)
T 3p2a_A 100 ------ALSTRFRIRSIPTIMLY-RNGKMID 123 (148)
T ss_dssp ------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ------HHHHHCCCCccCEEEEE-ECCeEEE
Confidence 35567899999999999 5898764
No 173
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=96.15 E-value=0.0011 Score=62.50 Aligned_cols=45 Identities=11% Similarity=0.061 Sum_probs=34.4
Q ss_pred hhCcCCceEEEEeCCCCceecccHHHHHHHhCcccccCChhhHHHHHhh
Q 044391 419 VWKFSKKAILVPVDPQGRILNQNAFHMLWIWGNLAFPFSAEKEAALWKA 467 (691)
Q Consensus 419 ~f~~~~iP~LVvL~pqGkv~~~NA~~mI~~wG~~AFPFT~~r~e~L~~~ 467 (691)
.++++++|++++++|+|+++.. ++-..+..-|+++.+..+++-+.
T Consensus 95 ~~~v~~~PT~~f~~~~G~~v~~----~~G~~~~~~~~~~~~~~~~ll~~ 139 (151)
T 3ph9_A 95 SPDGQYVPRIMFVDPSLTVRAD----IAGRYSNRLYTYEPRDLPLLIEN 139 (151)
T ss_dssp CTTCCCSSEEEEECTTSCBCTT----CCCSCTTSTTCCCGGGHHHHHHH
T ss_pred hcCCCCCCEEEEECCCCCEEEE----EeCCcCCcccccchhhHHHHHHH
Confidence 3678999999999999999873 23345567788988877776654
No 174
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=96.09 E-value=0.0031 Score=55.92 Aligned_cols=67 Identities=12% Similarity=0.089 Sum_probs=44.7
Q ss_pred cCcEEEEEEecCCCC--------------hhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 333 RRKHVLLLISSLDLS--------------DEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 333 ~gK~VlL~fSal~~~--------------~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
.||.|+++|.+.||+ +|.- +.+. ++++.+ +++.++-|.+ |++
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~----~~~~~~~vd~--------d~~--------- 78 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQ----GKLTVAKLNI--------DQN--------- 78 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-----------CEEEEEET--------TSC---------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhc----CCeEEEEEEC--------CCC---------
Confidence 489999999999999 8743 5566 655543 3466666654 211
Q ss_pred CCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 396 MMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 396 ~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+ .+.+.|++++.|+++++ ++|+++.
T Consensus 79 ---------~---------~l~~~~~v~~~Pt~~~~-~~G~~~~ 103 (123)
T 1oaz_A 79 ---------P---------GTAPKYGIRGIPTLLLF-KNGEVAA 103 (123)
T ss_dssp ---------T---------TTGGGGTCCBSSEEEEE-ESSSEEE
T ss_pred ---------H---------HHHHHcCCCccCEEEEE-ECCEEEE
Confidence 1 13466899999999999 9999864
No 175
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.07 E-value=0.0071 Score=52.05 Aligned_cols=67 Identities=10% Similarity=0.129 Sum_probs=44.2
Q ss_pred ecCcEEEEEEecCCCChhhh--HHHHHHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 332 LRRKHVLLLISSLDLSDEEI--LVLHLYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 332 L~gK~VlL~fSal~~~~~e~--~~L~iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+||.|+++|.+.||++|.- +.|. ++.++. ++.++-|.+ |+.
T Consensus 31 ~~~~~~vv~f~a~wC~~C~~~~~~~~---~~~~~~--~~~~~~vd~--------~~~----------------------- 74 (117)
T 2xc2_A 31 HKNKLVVVDFFATWCGPCKTIAPLFK---ELSEKY--DAIFVKVDV--------DKL----------------------- 74 (117)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHH---HHHTTS--SSEEEEEET--------TTS-----------------------
T ss_pred CCCCEEEEEEECCCCHhHHHHhHHHH---HHHHHc--CcEEEEEEC--------Ccc-----------------------
Confidence 36899999999999988743 3444 433221 344444432 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 75 ----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 99 (117)
T 2xc2_A 75 ----EETARKYNISAMPTFIAI-KNGEKVG 99 (117)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----HHHHHHcCCCccceEEEE-eCCcEEE
Confidence 135567899999998887 7898764
No 176
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=96.06 E-value=0.013 Score=57.39 Aligned_cols=69 Identities=9% Similarity=-0.130 Sum_probs=51.7
Q ss_pred CcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
+|.|+++|.+.||++|. .+.+. ++++++.. +.++.++.|.+-+ |+
T Consensus 30 ~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-~~~v~~~~vd~~~------~~------------------------- 77 (244)
T 3q6o_A 30 RSAWAVEFFASWCGHCIAFAPTWXALAEDVKAW-RPALYLAALDCAE------ET------------------------- 77 (244)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGG-TTTEEEEEEETTS------TT-------------------------
T ss_pred CCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhc-cCcEEEEEEeCCc------hh-------------------------
Confidence 59999999999998874 47788 99888753 4568888886511 11
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCc
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGR 436 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGk 436 (691)
-+.+.+.|++++.|+++++++.++
T Consensus 78 --~~~l~~~~~v~~~Pt~~~~~~g~~ 101 (244)
T 3q6o_A 78 --NSAVCRDFNIPGFPTVRFFXAFTX 101 (244)
T ss_dssp --THHHHHHTTCCSSSEEEEECTTCC
T ss_pred --hHHHHHHcCCCccCEEEEEeCCCc
Confidence 134566799999999999997443
No 177
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=96.03 E-value=0.015 Score=48.22 Aligned_cols=66 Identities=8% Similarity=0.088 Sum_probs=47.0
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.- +.|. +.++.+ ++.++.|.+ |+.
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-----~~~~~~v~~--------~~~----------------------- 61 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-----EVEFAKVDV--------DQN----------------------- 61 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----TSEEEEEET--------TTC-----------------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-----CCEEEEEec--------cCC-----------------------
Confidence 4899999999999988753 4566 655532 477777654 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++. +|+.+.
T Consensus 62 ----~~~~~~~~v~~~Pt~~~~~-~g~~~~ 86 (104)
T 2vim_A 62 ----EEAAAKYSVTAMPTFVFIK-DGKEVD 86 (104)
T ss_dssp ----HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred ----HHHHHHcCCccccEEEEEe-CCcEEE
Confidence 1345668999999988885 898765
No 178
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=96.00 E-value=0.013 Score=51.32 Aligned_cols=70 Identities=11% Similarity=0.050 Sum_probs=48.1
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhcc-CCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCC
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAR-EEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTII 408 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~-~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i 408 (691)
.+|.|+++|.+.||++|. .+.+. +.++++.+ .+.++.++-|-+ |+.
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~--------~~~---------------------- 81 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDG--------EKY---------------------- 81 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEET--------TTC----------------------
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEc--------ccc----------------------
Confidence 389999999999998874 36677 77776533 123444444421 211
Q ss_pred chHHHHHHHHhhCcCCceEEEEeCCCCce
Q 044391 409 EPAVVKYAKEVWKFSKKAILVPVDPQGRI 437 (691)
Q Consensus 409 ~~~~~r~ike~f~~~~iP~LVvL~pqGkv 437 (691)
+.+.+.|++++.|+++++.+.|+.
T Consensus 82 -----~~l~~~~~v~~~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 82 -----PDVIERMRVSGFPTMRYYTRIDKQ 105 (127)
T ss_dssp -----HHHHHHTTCCSSSEEEEECSSCSS
T ss_pred -----HhHHHhcCCccCCEEEEEeCCCCC
Confidence 235667999999999999887764
No 179
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=95.98 E-value=0.0091 Score=53.42 Aligned_cols=74 Identities=16% Similarity=0.103 Sum_probs=49.8
Q ss_pred ecCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCC
Q 044391 332 LRRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTII 408 (691)
Q Consensus 332 L~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i 408 (691)
+++ .|+++|.+.||++|.. +.|. ++++. + +.++.|.+-+ +.+....
T Consensus 30 ~~~-~vlv~F~a~wC~~C~~~~p~l~~l~~~~----~--v~~~~vd~~~------~~~~~~~------------------ 78 (135)
T 3emx_A 30 LQG-DAILAVYSKTCPHCHRDWPQLIQASKEV----D--VPIVMFIWGS------LIGEREL------------------ 78 (135)
T ss_dssp HTS-SEEEEEEETTCHHHHHHHHHHHHHHTTC----C--SCEEEEEECT------TCCHHHH------------------
T ss_pred hCC-cEEEEEECCcCHhhhHhChhHHHHHHHC----C--CEEEEEECCC------chhhhhh------------------
Confidence 344 7999999999988753 5555 55443 2 7778876522 2222111
Q ss_pred chHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 409 EPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 409 ~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
...+.+.+.|++++.|++++++ +|+++.
T Consensus 79 --d~~~~l~~~~~v~~~Pt~~~~~-~G~~v~ 106 (135)
T 3emx_A 79 --SAARLEMNKAGVEGTPTLVFYK-EGRIVD 106 (135)
T ss_dssp --HHHHHHHHHHTCCSSSEEEEEE-TTEEEE
T ss_pred --hhhHHHHHHcCCceeCeEEEEc-CCEEEE
Confidence 2234567789999999999999 998764
No 180
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=95.98 E-value=0.012 Score=50.97 Aligned_cols=67 Identities=12% Similarity=0.000 Sum_probs=45.9
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.- +.|. ++++.+ ++.++.|.+ +++
T Consensus 36 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-----~~~~~~vd~-------~~~------------------------ 79 (124)
T 1faa_A 36 GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-----DVIFLKLDC-------NQE------------------------ 79 (124)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----TSEEEEEEC-------SST------------------------
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-----CCEEEEEec-------Ccc------------------------
Confidence 6899999999999988753 5677 766543 355555532 111
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.+.|++++.|++++. ++|+++.
T Consensus 80 ---~~~~~~~~~v~~~Pt~~~~-~~G~~~~ 105 (124)
T 1faa_A 80 ---NKTLAKELGIRVVPTFKIL-KENSVVG 105 (124)
T ss_dssp ---THHHHHHHCCSSSSEEEEE-ETTEEEE
T ss_pred ---hHHHHHHcCCCeeeEEEEE-eCCcEEE
Confidence 1234567899999996655 8998764
No 181
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=95.94 E-value=0.014 Score=56.00 Aligned_cols=68 Identities=9% Similarity=-0.154 Sum_probs=50.1
Q ss_pred ecCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCC
Q 044391 332 LRRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTII 408 (691)
Q Consensus 332 L~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i 408 (691)
.+||.|+++|.+.||++|.- +.+. ++++++ +++.++.|-+ |..
T Consensus 112 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~----~~v~~~~vd~--------~~~---------------------- 157 (210)
T 3apq_A 112 NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVD----GLLRIGAVNC--------GDD---------------------- 157 (210)
T ss_dssp HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTB----TTBEEEEEET--------TTC----------------------
T ss_pred ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhc----CceEEEEEEC--------Ccc----------------------
Confidence 57999999999999988743 6677 777764 3466666643 211
Q ss_pred chHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 409 EPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 409 ~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+++.
T Consensus 158 -----~~l~~~~~v~~~Pt~~~~-~~G~~~~ 182 (210)
T 3apq_A 158 -----RMLCRMKGVNSYPSLFIF-RSGMAAV 182 (210)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-CTTSCCE
T ss_pred -----HHHHHHcCCCcCCeEEEE-ECCCcee
Confidence 125566899999999999 9998743
No 182
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=95.90 E-value=0.02 Score=51.01 Aligned_cols=66 Identities=14% Similarity=0.069 Sum_probs=47.0
Q ss_pred CcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
++.|+|+|.+.||++|.. +.|. ++++++ +++.++.|.+ |.+
T Consensus 50 ~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~----~~v~~~~vd~--------~~~------------------------ 93 (140)
T 1v98_A 50 APLTLVDFFAPWCGPCRLVSPILEELARDHA----GRLKVVKVNV--------DEH------------------------ 93 (140)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHHHHTT----TTEEEEEEET--------TTC------------------------
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHcc----CceEEEEEEC--------CCC------------------------
Confidence 333999999999988743 5566 666653 3477777654 211
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+++.
T Consensus 94 ---~~l~~~~~v~~~Pt~~~~-~~G~~~~ 118 (140)
T 1v98_A 94 ---PGLAARYGVRSVPTLVLF-RRGAPVA 118 (140)
T ss_dssp ---HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ---HHHHHHCCCCccCEEEEE-eCCcEEE
Confidence 125567899999999999 7999864
No 183
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=95.83 E-value=0.025 Score=54.32 Aligned_cols=70 Identities=10% Similarity=-0.018 Sum_probs=52.3
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.|+++|.+.||++|.. +.+. +.++++.+ ..++.++.|-+ +++
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~-~~~v~~~~vd~--------~~~----------------------- 193 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKR-SPPIPLAKVDA--------TAE----------------------- 193 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTS-SSCCCEEEEET--------TTC-----------------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhcc-CCcEEEEEEEC--------CCC-----------------------
Confidence 4789999999999988743 6788 88888754 45677777743 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+.+.+.|++++.|+++++. +|+.+.
T Consensus 194 ----~~l~~~~~v~~~Pt~~~~~-~g~~~~ 218 (241)
T 3idv_A 194 ----TDLAKRFDVSGYPTLKIFR-KGRPYD 218 (241)
T ss_dssp ----HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred ----HHHHHHcCCcccCEEEEEE-CCeEEE
Confidence 1266779999999999997 577653
No 184
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=95.82 E-value=0.069 Score=55.07 Aligned_cols=150 Identities=10% Similarity=0.097 Sum_probs=82.9
Q ss_pred CcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
.+.++++|.+.||++++ .+.+. +.++++. .+-+++| | .+...
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~----~i~f~~v---d-------~~~~~--------------------- 179 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKG----KILFIFI---D-------SDHTD--------------------- 179 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTT----TCEEEEE---C-------TTSGG---------------------
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccC----ceEEEEe---c-------CChHH---------------------
Confidence 35688999999998764 24566 6666652 3444444 2 11100
Q ss_pred HHHHHHHHhhCcCC--ceEEEEeCCCCceecccHHHHHHHhCcccccCChhhHHHHHhhh----------------ccch
Q 044391 411 AVVKYAKEVWKFSK--KAILVPVDPQGRILNQNAFHMLWIWGNLAFPFSAEKEAALWKAE----------------SWRL 472 (691)
Q Consensus 411 ~~~r~ike~f~~~~--iP~LVvL~pqGkv~~~NA~~mI~~wG~~AFPFT~~r~e~L~~~e----------------~w~l 472 (691)
-+.+.+.|++++ .|++++++..+... .|....-++|.+.+.+.-++- .|.-
T Consensus 180 --~~~~~~~fgi~~~~~P~~~~~~~~~~~~---------ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~ 248 (361)
T 3uem_A 180 --NQRILEFFGLKKEECPAVRLITLEEEMT---------KYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDK 248 (361)
T ss_dssp --GHHHHHHTTCCTTTCSEEEEEECC--CC---------EECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTT
T ss_pred --HHHHHHHcCCCccCCccEEEEEcCCccc---------ccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCccccc
Confidence 123445689987 99999998744321 122223355655555443321 1111
Q ss_pred hhhcccCchhhhhhh-cCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCC--ceeeEEecc
Q 044391 473 ELLIDDIDATILEWM-KEERYICLYGGGDI-EWIRRFTTSAKAVARAAQI--NLGMAYVGK 529 (691)
Q Consensus 473 elLvd~id~~I~~~i-~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~--~~E~v~Vgk 529 (691)
+.+..=.+......+ ..+|.++++|.+.+ ..|+++.+.+.++++.... .+-++.|-.
T Consensus 249 ~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~ 309 (361)
T 3uem_A 249 QPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDS 309 (361)
T ss_dssp SSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEET
T ss_pred CCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEEC
Confidence 111100011222233 48999999999933 3349999999999887433 355554443
No 185
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=95.72 E-value=0.031 Score=53.41 Aligned_cols=69 Identities=9% Similarity=-0.032 Sum_probs=48.5
Q ss_pred CcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
++.++++|.+.||++|. .+.|. ++++.+.+.+.++.++.|.+ |+.
T Consensus 134 ~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~--------~~~------------------------ 181 (226)
T 1a8l_A 134 QDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEA--------IEY------------------------ 181 (226)
T ss_dssp SCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEG--------GGC------------------------
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEc--------ccC------------------------
Confidence 55669999999998874 46788 88887633234577766643 211
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
..+.+.|++++.|+++++ ++|+.+
T Consensus 182 ---~~l~~~~~v~~~Pt~~~~-~~G~~~ 205 (226)
T 1a8l_A 182 ---PEWADQYNVMAVPKIVIQ-VNGEDR 205 (226)
T ss_dssp ---HHHHHHTTCCSSCEEEEE-ETTEEE
T ss_pred ---HHHHHhCCCcccCeEEEE-eCCcee
Confidence 124567899999998887 588765
No 186
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=95.45 E-value=0.021 Score=50.16 Aligned_cols=75 Identities=9% Similarity=0.111 Sum_probs=49.5
Q ss_pred cCcEEEEEEecC-------CCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeee
Q 044391 333 RRKHVLLLISSL-------DLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTV 402 (691)
Q Consensus 333 ~gK~VlL~fSal-------~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAV 402 (691)
.||.|+++|.+. ||++|.. +.|. ++++++ +++.++.|.+ + +. . . |.
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~----~~~~~~~vd~-~------~~-~-~---------~~-- 78 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHIS----EGCVFIYCQV-G------EK-P-Y---------WK-- 78 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCC----TTEEEEEEEC-C------CH-H-H---------HH--
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcC----CCcEEEEEEC-C------Cc-h-h---------hh--
Confidence 489999999999 9988753 5676 666543 3577777765 1 11 1 1 21
Q ss_pred cCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 403 QHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 403 p~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+. . ..+.+.|+++++|+++++++.+++..
T Consensus 79 ---d~-~----~~~~~~~~i~~~Pt~~~~~~~~~~~g 107 (123)
T 1wou_A 79 ---DP-N----NDFRKNLKVTAVPTLLKYGTPQKLVE 107 (123)
T ss_dssp ---CT-T----CHHHHHHCCCSSSEEEETTSSCEEEG
T ss_pred ---ch-h----HHHHHHCCCCeeCEEEEEcCCceEec
Confidence 10 1 12445599999999999998555543
No 187
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=95.43 E-value=0.014 Score=56.76 Aligned_cols=67 Identities=12% Similarity=0.092 Sum_probs=48.7
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.|+|+|.+.||++|. .+.|. ++++++ +++.++.|.+ |.. ++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~~v~~~~vd~--------d~~------------------~~--- 75 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQ----GKLTVAKLNI--------DQN------------------PG--- 75 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT----TTCEEEEEET--------TTC------------------TT---
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhc----CCcEEEEEEC--------CCC------------------HH---
Confidence 489999999999998874 36677 877765 3377777754 211 11
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+.+.|++++.|+++++. +|+++.
T Consensus 76 ------l~~~~~v~~~Pt~~~~~-~G~~~~ 98 (222)
T 3dxb_A 76 ------TAPKYGIRGIPTLLLFK-NGEVAA 98 (222)
T ss_dssp ------TGGGGTCCSBSEEEEEE-TTEEEE
T ss_pred ------HHHHcCCCcCCEEEEEE-CCeEEE
Confidence 23568999999999995 888764
No 188
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=95.37 E-value=0.017 Score=55.79 Aligned_cols=81 Identities=12% Similarity=0.094 Sum_probs=49.6
Q ss_pred cceecCcEEEEEEecCCCChhhhH---HH--H-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeee
Q 044391 329 IEVLRRKHVLLLISSLDLSDEEIL---VL--H-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTV 402 (691)
Q Consensus 329 Is~L~gK~VlL~fSal~~~~~e~~---~L--~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAV 402 (691)
...-+||.|+|.|.+.||++|... .+ . +-+.+++ .+|+|.+ |. |+..+ ....
T Consensus 34 ~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~------~fv~ikV-D~-----de~~~-l~~~--------- 91 (173)
T 3ira_A 34 KARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE------AFVSIKV-DR-----EERPD-IDNI--------- 91 (173)
T ss_dssp HHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH------HCEEEEE-ET-----TTCHH-HHHH---------
T ss_pred HHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh------cCceeee-CC-----cccCc-HHHH---------
Confidence 334569999999999999888641 11 2 3333332 2466664 42 22111 1110
Q ss_pred cCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 403 QHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 403 p~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
-..++...+++.++|++|+++|+|+++..
T Consensus 92 ---------y~~~~q~~~gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 92 ---------YMTVCQIILGRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp ---------HHHHHHHHHSCCCSSEEEEECTTSCEEEE
T ss_pred ---------HHHHHHHHcCCCCCcceeeECCCCCceee
Confidence 11123334799999999999999999864
No 189
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.23 E-value=0.032 Score=50.11 Aligned_cols=63 Identities=11% Similarity=0.051 Sum_probs=43.4
Q ss_pred CcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
||.|+++|.+.||++|.. +.|. +.++. .+ +.|+-+ |. |+. |
T Consensus 30 ~~~vvv~f~a~wC~~C~~~~p~l~~la~~~-----~~--v~~~~v-d~-----~~~-----------~------------ 73 (135)
T 2dbc_A 30 DLWVVIHLYRSSVPMCLVVNQHLSVLARKF-----PE--TKFVKA-IV-----NSC-----------I------------ 73 (135)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHC-----SS--EEEEEE-CC-----SSS-----------C------------
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHC-----CC--cEEEEE-Eh-----hcC-----------c------------
Confidence 689999999999988853 5566 55543 22 555544 21 211 0
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
+.|++++.|+++++. +|+++..
T Consensus 74 -------~~~~i~~~Pt~~~~~-~G~~v~~ 95 (135)
T 2dbc_A 74 -------EHYHDNCLPTIFVYK-NGQIEGK 95 (135)
T ss_dssp -------SSCCSSCCSEEEEES-SSSCSEE
T ss_pred -------ccCCCCCCCEEEEEE-CCEEEEE
Confidence 358999999999997 9988753
No 190
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=95.05 E-value=0.045 Score=61.02 Aligned_cols=69 Identities=6% Similarity=-0.111 Sum_probs=52.4
Q ss_pred CcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
||.|+++|.+.||++|. .+.+. ++++++.. +..+.++-|-+ |.++
T Consensus 30 ~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~-~~~v~~~~VD~--------d~d~----------------------- 77 (519)
T 3t58_A 30 SSAWAVEFFASWCGHAIAFAPTWKELANDVKDW-RPALNLAVLDC--------AEET----------------------- 77 (519)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGG-TTTEEEEEEET--------TSGG-----------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCc-CCcEEEEEEEC--------Cccc-----------------------
Confidence 59999999999998874 47899 99998753 45688887754 2110
Q ss_pred HHHHHHHHhhCcCCceEEEEeCC---CCc
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDP---QGR 436 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~p---qGk 436 (691)
-+.+.+.|++++.|+++++++ +|+
T Consensus 78 --~~~l~~~~~V~~~PTl~~f~~g~~~G~ 104 (519)
T 3t58_A 78 --NSAVCREFNIAGFPTVRFFQAFTKNGS 104 (519)
T ss_dssp --GHHHHHHTTCCSBSEEEEECTTCCSCC
T ss_pred --cHHHHHHcCCcccCEEEEEcCcccCCC
Confidence 124567799999999999998 665
No 191
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=94.76 E-value=0.15 Score=52.25 Aligned_cols=153 Identities=7% Similarity=-0.020 Sum_probs=80.0
Q ss_pred CcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
+|.|+++|.+.||++|. .+.+. ++++++ +++.++.|-+ |.++
T Consensus 35 ~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~----~~~~~~~v~~--------d~~~----------------------- 79 (298)
T 3ed3_A 35 NYTSLVEFYAPWCGHCKKLSSTFRKAAKRLD----GVVQVAAVNC--------DLNK----------------------- 79 (298)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT----TTSEEEEEET--------TSTT-----------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcc----CCcEEEEEEc--------cCcc-----------------------
Confidence 78899999999998874 36677 777764 3488888865 2111
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCceecccHHHHHHHhCc-ccccCChhh-HHHHHhhhccchhhh---cccC-c-hhh
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRILNQNAFHMLWIWGN-LAFPFSAEK-EAALWKAESWRLELL---IDDI-D-ATI 483 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~~~NA~~mI~~wG~-~AFPFT~~r-~e~L~~~e~w~lelL---vd~i-d-~~I 483 (691)
-+.+.+.|++++.|+++++.+.+.+....+..-....|. ...+|+-.| .++|. .|-.+.+ +..+ + ..+
T Consensus 80 --~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~---~fl~~~~~~~v~~i~~~~~l 154 (298)
T 3ed3_A 80 --NKALCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIV---DFSLSRIRSYVKKFVRIDTL 154 (298)
T ss_dssp --THHHHHHTTCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHH---HHHHTTCCCCEEECSCGGGH
T ss_pred --CHHHHHhCCCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHH---HHHHHhcccccEEcCCHHHH
Confidence 134566799999999999987543333333221122221 123333222 11111 2211111 1111 1 124
Q ss_pred hhhhcC-CcEEEEEccCChhHHHHHHHHHHHHHHHhCCceeeEEeccc
Q 044391 484 LEWMKE-ERYICLYGGGDIEWIRRFTTSAKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 484 ~~~i~e-gK~I~LYgG~D~~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkd 530 (691)
..+++. ++.+.++|+++..= .+.+.++|......+..+++..+
T Consensus 155 ~~~l~~~~~~~vi~fs~~~~~----~~~f~~~A~~~~~~~~F~~v~~~ 198 (298)
T 3ed3_A 155 GSLLRKSPKLSVVLFSKQDKI----SPVYKSIALDWLGKFDFYSISNK 198 (298)
T ss_dssp HHHHTSCSSEEEEEEESSSSC----CHHHHHHHHHTBTTEEEEEEEGG
T ss_pred HHHHhcCCceEEEEEcCCCcc----hHHHHHHHHHhhcCcEEEEEcch
Confidence 456664 56777777654431 23555666665556666666543
No 192
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=94.66 E-value=0.051 Score=46.53 Aligned_cols=67 Identities=7% Similarity=-0.105 Sum_probs=46.9
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhcc-CCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCC
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAR-EEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTII 408 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~-~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i 408 (691)
++|.|+++|.+.||++|. .+.|. ++++++.. ...++.++.|-+ |+. | +
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~--------~~~-----------~---------~ 75 (121)
T 2djj_A 24 DTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDA--------TAN-----------D---------V 75 (121)
T ss_dssp TTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEET--------TTS-----------C---------C
T ss_pred CCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEEC--------ccc-----------c---------c
Confidence 689999999999998874 36788 88887631 012566666543 210 0 1
Q ss_pred chHHHHHHHHhhCcCCceEEEEeCCCCce
Q 044391 409 EPAVVKYAKEVWKFSKKAILVPVDPQGRI 437 (691)
Q Consensus 409 ~~~~~r~ike~f~~~~iP~LVvL~pqGkv 437 (691)
.+ ++++.|+++++++.|++
T Consensus 76 --------~~--~v~~~Pt~~~~~~~~~~ 94 (121)
T 2djj_A 76 --------PD--EIQGFPTIKLYPAGAKG 94 (121)
T ss_dssp --------SS--CCSSSSEEEEECSSCTT
T ss_pred --------cc--ccCcCCeEEEEeCcCCC
Confidence 11 88999999999998883
No 193
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=93.67 E-value=0.0057 Score=50.48 Aligned_cols=67 Identities=12% Similarity=0.130 Sum_probs=45.0
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.|+++|.+.||+.|.. +.|. +.++++ .++.++.|.+ |++
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~----~~~~~~~v~~--------~~~----------------------- 62 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYE----GKVKVVKVNV--------DEN----------------------- 62 (106)
Confidence 3789999999999988753 4566 665543 2355554432 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+++.
T Consensus 63 ----~~~~~~~~v~~~Pt~~~~-~~g~~~~ 87 (106)
T 2yj7_A 63 ----PNTAAQYGIRSIPTLLLF-KNGQVVD 87 (106)
Confidence 123455789999999999 8998753
No 194
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=94.64 E-value=0.04 Score=53.49 Aligned_cols=100 Identities=7% Similarity=-0.003 Sum_probs=64.8
Q ss_pred CCceeeccee-cCcEEEE-EEecCCCChh---hhHHHH-HHHHhhccCCCCe-eEEEEecccCCCCCChhhHHHHHHHhc
Q 044391 323 SRTRVNIEVL-RRKHVLL-LISSLDLSDE---EILVLH-LYREHKAREEFDY-AIVWLPIVDRSIAWDEGYRQKFEQLQA 395 (691)
Q Consensus 323 ~~~kV~Is~L-~gK~VlL-~fSal~~~~~---e~~~L~-iY~~lk~~~~~~f-EIVwIpiVd~s~~W~D~d~~~F~~~~~ 395 (691)
+-+.|+++++ +||.|.| +|=+.|||.| |++-+. .|++++++ ++ +||=||. | +-...+.|-+-..
T Consensus 35 ~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~---g~d~VigIS~-D-----~~~~~~~f~~~~~ 105 (176)
T 4f82_A 35 GPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAA---GIDEIWCVSV-N-----DAFVMGAWGRDLH 105 (176)
T ss_dssp EEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT---TCCEEEEEES-S-----CHHHHHHHHHHTT
T ss_pred CceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhC---CCCEEEEEeC-C-----CHHHHHHHHHHhC
Confidence 3467999996 9996655 5667788776 566788 99999854 57 9999996 4 2345667765332
Q ss_pred -C--CCeeeecCCCCCchHHHHHHHHhhCcC-----------CceEEEEeCCCCceeccc
Q 044391 396 -M--MPWYTVQHPTIIEPAVVKYAKEVWKFS-----------KKAILVPVDPQGRILNQN 441 (691)
Q Consensus 396 -~--MPWyAVp~~d~i~~~~~r~ike~f~~~-----------~iP~LVvL~pqGkv~~~N 441 (691)
. .|-++= ++ .+.. +.|++. ..|...|+ ++|++....
T Consensus 106 l~~~f~lLsD--~~---~~va----~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~ 155 (176)
T 4f82_A 106 TAGKVRMMAD--GS---AAFT----HALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLA 155 (176)
T ss_dssp CTTTSEEEEC--TT---CHHH----HHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEE
T ss_pred CCCCceEEEc--Cc---hHHH----HHhCCCccccccCCCcccccEEEEE-cCCEEEEEE
Confidence 1 333332 22 2333 335542 25778888 999997654
No 195
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=94.57 E-value=0.05 Score=50.19 Aligned_cols=65 Identities=12% Similarity=0.183 Sum_probs=38.5
Q ss_pred CcEEEEEEecCC--CChhh--hHHHH-HHHHhhccCCCCee--EEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCC
Q 044391 334 RKHVLLLISSLD--LSDEE--ILVLH-LYREHKAREEFDYA--IVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPT 406 (691)
Q Consensus 334 gK~VlL~fSal~--~~~~e--~~~L~-iY~~lk~~~~~~fE--IVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d 406 (691)
.+.++++|++.| |++|. .+.|. ++++. +++. ++-|-+ |+.
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-----~~v~~~~~~Vd~--------d~~-------------------- 80 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-----PQFDWQVAVADL--------EQS-------------------- 80 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-----TTSCCEEEEECH--------HHH--------------------
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-----cccceeEEEEEC--------CCC--------------------
Confidence 355888999887 76764 36666 66654 2355 555532 211
Q ss_pred CCchHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 407 IIEPAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 407 ~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|+++++|+++++ .+|+.+.
T Consensus 81 -------~~la~~~~V~~iPT~~~f-k~G~~v~ 105 (142)
T 2es7_A 81 -------EAIGDRFNVRRFPATLVF-TDGKLRG 105 (142)
T ss_dssp -------HHHHHTTTCCSSSEEEEE-SCC----
T ss_pred -------HHHHHhcCCCcCCeEEEE-eCCEEEE
Confidence 135667999999999999 8998764
No 196
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=94.48 E-value=0.035 Score=44.43 Aligned_cols=61 Identities=13% Similarity=0.104 Sum_probs=43.2
Q ss_pred cEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCchH
Q 044391 335 KHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEPA 411 (691)
Q Consensus 335 K~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~~ 411 (691)
+.++++|++.||++|. .+.|. ++++.+ ++++++.|.+ |++ ++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~~vd~--------~~~------------------~~----- 47 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP----DAVEVEYINV--------MEN------------------PQ----- 47 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS----SSEEEEEEES--------SSS------------------CC-----
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC----CceEEEEEEC--------CCC------------------HH-----
Confidence 4678999999998874 36677 776653 4588888865 211 11
Q ss_pred HHHHHHHhhCcCCceEEEEeCCCCce
Q 044391 412 VVKYAKEVWKFSKKAILVPVDPQGRI 437 (691)
Q Consensus 412 ~~r~ike~f~~~~iP~LVvL~pqGkv 437 (691)
+.+.|++++.|++++ +|++
T Consensus 48 ----~~~~~~v~~~Pt~~~---~G~~ 66 (85)
T 1fo5_A 48 ----KAMEYGIMAVPTIVI---NGDV 66 (85)
T ss_dssp ----TTTSTTTCCSSEEEE---TTEE
T ss_pred ----HHHHCCCcccCEEEE---CCEE
Confidence 235589999999999 8886
No 197
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=94.43 E-value=0.0096 Score=51.66 Aligned_cols=66 Identities=9% Similarity=0.080 Sum_probs=46.1
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|. .+.|. ++++.+ ++.++.|.+ |+.
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----~v~~~~v~~--------~~~----------------------- 78 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-----GAVFLKVDV--------DEL----------------------- 78 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-----TBCCEECCT--------TTS-----------------------
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-----CCEEEEEec--------cch-----------------------
Confidence 489999999999998874 46677 776643 355555532 211
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.|++++.|+++++ ++|+++.
T Consensus 79 ----~~~~~~~~v~~~Pt~~~~-~~g~~~~ 103 (130)
T 1wmj_A 79 ----KEVAEKYNVEAMPTFLFI-KDGAEAD 103 (130)
T ss_dssp ----GGGHHHHTCCSSCCCCBC-TTTTCCB
T ss_pred ----HHHHHHcCCCccceEEEE-eCCeEEE
Confidence 123456899999998887 8998764
No 198
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=94.37 E-value=0.11 Score=48.97 Aligned_cols=70 Identities=14% Similarity=0.238 Sum_probs=45.1
Q ss_pred CcEEEEEEecCCCChhhhH---HHH---HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCC
Q 044391 334 RKHVLLLISSLDLSDEEIL---VLH---LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTI 407 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~~---~L~---iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~ 407 (691)
||.|+|+|.+.||..|... ++. |-+.+++ +| |+|-+ |. ++.
T Consensus 42 ~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~----~f--v~v~~-d~----~~~---------------------- 88 (153)
T 2dlx_A 42 NKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE----HF--IFWQV-YH----DSE---------------------- 88 (153)
T ss_dssp TCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH----TE--EEEEE-ES----SSH----------------------
T ss_pred CCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc----Ce--EEEEE-ec----CCH----------------------
Confidence 8999999999999887432 221 4444433 24 44433 21 111
Q ss_pred CchHHHHHHHHhhCcCCceEEEEeCCC-Cceecc
Q 044391 408 IEPAVVKYAKEVWKFSKKAILVPVDPQ-GRILNQ 440 (691)
Q Consensus 408 i~~~~~r~ike~f~~~~iP~LVvL~pq-Gkv~~~ 440 (691)
.. +.+.+.|++.+.|+++++||+ |+.+..
T Consensus 89 ---~~-~~l~~~y~v~~~P~~~fld~~~G~~l~~ 118 (153)
T 2dlx_A 89 ---EG-QRYIQFYKLGDFPYVSILDPRTGQKLVE 118 (153)
T ss_dssp ---HH-HHHHHHHTCCSSSEEEEECTTTCCCCEE
T ss_pred ---hH-HHHHHHcCCCCCCEEEEEeCCCCcEeee
Confidence 11 234467899999999999999 877643
No 199
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=94.21 E-value=0.04 Score=44.11 Aligned_cols=59 Identities=12% Similarity=0.004 Sum_probs=42.4
Q ss_pred EEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCchHHH
Q 044391 337 VLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEPAVV 413 (691)
Q Consensus 337 VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~~~~ 413 (691)
++++|++.||++|. .+.|. +.++.. ++++++.|.+ |++.
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~~vd~--------~~~~-------------------------- 45 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFG----DKIDVEKIDI--------MVDR-------------------------- 45 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHC----SSCCEEEECT--------TTCG--------------------------
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhc----CCeEEEEEEC--------CCCH--------------------------
Confidence 57889999998874 36677 777664 3588888864 2111
Q ss_pred HHHHHhhCcCCceEEEEeCCCCce
Q 044391 414 KYAKEVWKFSKKAILVPVDPQGRI 437 (691)
Q Consensus 414 r~ike~f~~~~iP~LVvL~pqGkv 437 (691)
.+.+.|++++.|++++ +|++
T Consensus 46 -~~~~~~~v~~~Pt~~~---~G~~ 65 (85)
T 1nho_A 46 -EKAIEYGLMAVPAIAI---NGVV 65 (85)
T ss_dssp -GGGGGTCSSCSSEEEE---TTTE
T ss_pred -HHHHhCCceeeCEEEE---CCEE
Confidence 1335689999999999 8886
No 200
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=94.14 E-value=0.15 Score=47.82 Aligned_cols=68 Identities=15% Similarity=0.023 Sum_probs=47.0
Q ss_pred cEEEEEEecCCC--ChhhhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCchH
Q 044391 335 KHVLLLISSLDL--SDEEILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEPA 411 (691)
Q Consensus 335 K~VlL~fSal~~--~~~e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~~ 411 (691)
+.|+++|.|.|| +||.. +. +.++|.+..++++.|+-|=+ |+.
T Consensus 34 ~~vlVdF~A~wCr~gpCk~--iaPvleela~e~~~~v~~~KVdv--------De~------------------------- 78 (137)
T 2qsi_A 34 KIVVLFFRGDAVRFPEAAD--LAVVLPELINAFPGRLVAAEVAA--------EAE------------------------- 78 (137)
T ss_dssp SEEEEEECCCTTTCTTHHH--HHHHHHHHHHTSTTTEEEEEECG--------GGH-------------------------
T ss_pred CcEEEEEeCCccCCCchhh--HHhHHHHHHHHccCCcEEEEEEC--------CCC-------------------------
Confidence 489999999999 78753 33 44554433345688887732 321
Q ss_pred HHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 412 VVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 412 ~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
+.|.++|+++++|+|+++ -+|+.+..
T Consensus 79 --~~la~~ygV~siPTlilF-kdG~~v~~ 104 (137)
T 2qsi_A 79 --RGLMARFGVAVCPSLAVV-QPERTLGV 104 (137)
T ss_dssp --HHHHHHHTCCSSSEEEEE-ECCEEEEE
T ss_pred --HHHHHHcCCccCCEEEEE-ECCEEEEE
Confidence 235566899999999999 57877754
No 201
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=94.04 E-value=0.38 Score=55.09 Aligned_cols=147 Identities=8% Similarity=-0.086 Sum_probs=84.1
Q ss_pred CcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
++.++++|.+.||++|. .+.+. +.++++ ++..+++|-. +.
T Consensus 563 ~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~----~~v~~~~vd~----------~~----------------------- 605 (780)
T 3apo_A 563 DEVWMVDFYSPWSHPSQVLMPEWKRMARTLT----GLINVGSVDC----------GQ----------------------- 605 (780)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHHT----TTSEEEEEET----------TT-----------------------
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHhh----CCeEEEEEEC----------cc-----------------------
Confidence 46789999999998764 25566 666665 2355555422 10
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCceecccHHHHHHHhCcccccCChhhHHHHHhhhccchhhhcccCch-hhhh-hhc
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRILNQNAFHMLWIWGNLAFPFSAEKEAALWKAESWRLELLIDDIDA-TILE-WMK 488 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~~~NA~~mI~~wG~~AFPFT~~r~e~L~~~e~w~lelLvd~id~-~I~~-~i~ 488 (691)
-+.+.+.+++++.|++++..+.++.-. +.. .| ++.+++.+.+.+.-.+.. ...+. .++. .... ..+
T Consensus 606 --~~~l~~~~~v~~~Pti~~~~~~~~~~~-~~~----~y--~g~~~~~~~l~~fi~~~~--~~~v~-~l~~~~~~~~~~~ 673 (780)
T 3apo_A 606 --YHSFCTQENVQRYPEIRFYPQKSSKAY-QYH----SY--NGWNRDAYSLRSWGLGFL--PQASI-DLTPQTFNEKVLQ 673 (780)
T ss_dssp --THHHHHHTTCCSSSEEEEECCCSSSCC-SCE----EC--CCSCCSHHHHHHHHHTTS--CCCSE-EECHHHHHHHTTT
T ss_pred --hHHHHHHcCCCCCCeEEEEcCCCcCcc-chh----hc--CCCCCCHHHHHHHHhhhc--ccccc-cCCHHHHHHHHhc
Confidence 012456689999999999987543210 000 00 122344433333222211 11111 1222 2222 245
Q ss_pred CCcEEEEEccCChhH---HHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 489 EERYICLYGGGDIEW---IRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 489 egK~I~LYgG~D~~W---ir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.||.+.++|.+ .| |+++.+.+.++++..+..+.++.|.-+.
T Consensus 674 ~~~~v~v~F~a--~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~ 717 (780)
T 3apo_A 674 GKTHWVVDFYA--PWSGPSQNFAPEFELLARMIKGKVRAGKVDCQA 717 (780)
T ss_dssp CSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CCCeEEEEEEC--CCCHHHHHHHHHHHHHHHHhcCCceEEEEECCC
Confidence 78999999999 66 5999999999988754466666665553
No 202
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=93.71 E-value=0.14 Score=48.02 Aligned_cols=70 Identities=9% Similarity=-0.024 Sum_probs=47.4
Q ss_pred cCcEEEEEEecCC--CChhhhHHHH-HHHHhhccCCCC-eeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCC
Q 044391 333 RRKHVLLLISSLD--LSDEEILVLH-LYREHKAREEFD-YAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTII 408 (691)
Q Consensus 333 ~gK~VlL~fSal~--~~~~e~~~L~-iY~~lk~~~~~~-fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i 408 (691)
.++.|+++|.+.| |+||. .+. +.++|.+..+++ +.|+-|=+ | +
T Consensus 33 ~~~~vlVdF~a~~crCgpCk--~iaPvleela~e~~g~~v~~~KVdv--------D--e--------------------- 79 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVS--DNPVMIGELLHEFPDYTWQVAIADL--------E--Q--------------------- 79 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTT--HHHHHHHHHHTTCTTSCCEEEECCH--------H--H---------------------
T ss_pred CCCCEEEEEeCCcccCCcHH--HHHhHHHHHHHHcCCCeEEEEEEEC--------C--C---------------------
Confidence 4567899999999 66773 345 666665443445 77776622 2 2
Q ss_pred chHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 409 EPAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 409 ~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
-..|..+|+++++|+|+++ -+|+++..
T Consensus 80 ----~~~lA~~ygV~sIPTlilF-k~G~~v~~ 106 (140)
T 2qgv_A 80 ----SEAIGDRFGAFRFPATLVF-TGGNYRGV 106 (140)
T ss_dssp ----HHHHHHHHTCCSSSEEEEE-ETTEEEEE
T ss_pred ----CHHHHHHcCCccCCEEEEE-ECCEEEEE
Confidence 2235567899999999999 57887643
No 203
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=93.45 E-value=0.85 Score=43.64 Aligned_cols=41 Identities=7% Similarity=-0.178 Sum_probs=27.8
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEeccc
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkd 530 (691)
.++.++++|.+.+ ..|+++.+.+.++++.. ..+.++.|.-+
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~ 176 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDAS 176 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGG
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECC
Confidence 4556578788822 33499999999998774 35666666554
No 204
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=92.94 E-value=0.26 Score=48.97 Aligned_cols=70 Identities=9% Similarity=-0.014 Sum_probs=46.7
Q ss_pred eecCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCC
Q 044391 331 VLRRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTI 407 (691)
Q Consensus 331 ~L~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~ 407 (691)
.++|+.+++.|.+.||++|. .+.|. ++.+.+.+...++.++-|-+ +. +
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~--------~~------------------~--- 185 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEA--------YE------------------N--- 185 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEET--------TT------------------C---
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEEC--------cc------------------C---
Confidence 46688999999999998884 36677 77766421124566655532 11 0
Q ss_pred CchHHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 408 IEPAVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 408 i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
..+.+.|++++.|++++ +|+++
T Consensus 186 ------~~~~~~~~V~~vPt~~i---~G~~~ 207 (243)
T 2hls_A 186 ------PDIADKYGVMSVPSIAI---NGYLV 207 (243)
T ss_dssp ------HHHHHHTTCCSSSEEEE---TTEEE
T ss_pred ------HHHHHHcCCeeeCeEEE---CCEEE
Confidence 12445689999999998 78754
No 205
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=92.30 E-value=0.1 Score=52.89 Aligned_cols=89 Identities=11% Similarity=0.094 Sum_probs=53.4
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+||.|+++|.+.||++|.. +.|. ++++.. + |.|+-| |.+.. .
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-----~--v~f~kV--------d~d~~---~----------------- 176 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP-----M--VKFCKI--------KASNT---G----------------- 176 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT-----T--SEEEEE--------EHHHH---C-----------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-----C--CEEEEE--------eCCcH---H-----------------
Confidence 3899999999999999854 5566 665532 2 445544 22211 0
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceecccHHHHHHHhCcccccCChhhHHHHHhh
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILNQNAFHMLWIWGNLAFPFSAEKEAALWKA 467 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~NA~~mI~~wG~~AFPFT~~r~e~L~~~ 467 (691)
+.+.|++++.|+++++. +|+++.. -.+.....|. -|+.+.++.+-++
T Consensus 177 ------l~~~~~I~~~PTll~~~-~G~~v~~-~vG~~~~~g~---~~~~e~Le~~L~~ 223 (245)
T 1a0r_P 177 ------AGDRFSSDVLPTLLVYK-GGELLSN-FISVTEQLAE---EFFTGDVESFLNE 223 (245)
T ss_dssp ------CTTSSCTTTCSEEEEEE-TTEEEEE-ETTGGGGSCT---TCCHHHHHHHHHT
T ss_pred ------HHHHCCCCCCCEEEEEE-CCEEEEE-EeCCcccccc---cccHHHHHHHHHH
Confidence 12358999999999885 8988743 1221111121 2666665555443
No 206
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=91.89 E-value=0.19 Score=49.58 Aligned_cols=90 Identities=9% Similarity=0.014 Sum_probs=53.4
Q ss_pred cCcEEEEEEecCCCChhhhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCchH
Q 044391 333 RRKHVLLLISSLDLSDEEILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEPA 411 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~~ 411 (691)
+||.|+++|.+.||++|.. +. ++++|.++. .++.++-|.+ + . +
T Consensus 119 ~~k~vvV~F~a~wC~~C~~--l~p~l~~la~~~-~~v~f~~vd~----------~-~----------------~------ 162 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDA--LNSSLECLAAEY-PMVKFCKIRA----------S-N----------------T------ 162 (217)
T ss_dssp TTCEEEEEEECTTSTTHHH--HHHHHHHHHTTC-TTSEEEEEEH----------H-H----------------H------
T ss_pred CCcEEEEEEECCCCccHHH--HHHHHHHHHHHC-CCeEEEEEEC----------C-c----------------H------
Confidence 3699999999999999854 23 444444331 2455555432 2 1 0
Q ss_pred HHHHHHHhhCcCCceEEEEeCCCCceecccHHHHHHHhCcccccCChhhHHHHHh
Q 044391 412 VVKYAKEVWKFSKKAILVPVDPQGRILNQNAFHMLWIWGNLAFPFSAEKEAALWK 466 (691)
Q Consensus 412 ~~r~ike~f~~~~iP~LVvL~pqGkv~~~NA~~mI~~wG~~AFPFT~~r~e~L~~ 466 (691)
.+.+.|++++.|+++++. +|+++.. -.+.....| --|+.+.++.+-.
T Consensus 163 ---~l~~~~~i~~~PTl~~~~-~G~~v~~-~~G~~~~~g---~~~~~~~Le~~L~ 209 (217)
T 2trc_P 163 ---GAGDRFSSDVLPTLLVYK-GGELISN-FISVAEQFA---EDFFAADVESFLN 209 (217)
T ss_dssp ---TCSTTSCGGGCSEEEEEE-TTEEEEE-ETTGGGGSC---SSCCHHHHHHHHH
T ss_pred ---HHHHHCCCCCCCEEEEEE-CCEEEEE-EeCCcccCc---ccCCHHHHHHHHH
Confidence 022357999999999995 8988743 222223333 2366666655543
No 207
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=91.82 E-value=0.14 Score=54.97 Aligned_cols=65 Identities=8% Similarity=-0.062 Sum_probs=46.3
Q ss_pred CcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
||.|+++|.+.||++|. .+.|. ++++++.. .++.++.|-. +.. .
T Consensus 370 ~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~--~~v~~~~id~--------~~~---------~-------------- 416 (481)
T 3f8u_A 370 NKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKD--PNIVIAKMDA--------TAN---------D-------------- 416 (481)
T ss_dssp TCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTC--SSEEEEEEET--------TSS---------C--------------
T ss_pred CCcEEEEEecCcChhHHHhhHHHHHHHHHhccC--CCEEEEEEEC--------Cch---------h--------------
Confidence 89999999999998874 47788 88887632 2455555432 110 0
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCc
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGR 436 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGk 436 (691)
+.+.|++++.|+++++++.|+
T Consensus 417 -----~~~~~~v~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 417 -----VPSPYEVRGFPTIYFSPANKK 437 (481)
T ss_dssp -----CCTTCCCCSSSEEEEECTTCT
T ss_pred -----hHhhCCCcccCEEEEEeCCCe
Confidence 113589999999999998887
No 208
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=90.69 E-value=0.89 Score=41.25 Aligned_cols=69 Identities=14% Similarity=0.089 Sum_probs=50.9
Q ss_pred CcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
+|.|+++|.+.||++|.. +.++ ..++ ++..++.|=+ |+ .+
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~------~~v~~~~vdV--------de-----------------------~r 66 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE------RDMDGYYLIV--------QQ-----------------------ER 66 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH------HTCCEEEEEG--------GG-----------------------GH
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc------CCceEEEEEe--------ec-----------------------Cc
Confidence 789999999999999854 4566 5442 3467777733 21 23
Q ss_pred HHHHHHHHhhCcCC-ceEEEEeCCCCceecc
Q 044391 411 AVVKYAKEVWKFSK-KAILVPVDPQGRILNQ 440 (691)
Q Consensus 411 ~~~r~ike~f~~~~-iP~LVvL~pqGkv~~~ 440 (691)
++-..|.+.|++++ .|+++++ -+|+++-.
T Consensus 67 ~~Sn~IA~~~~V~h~sPq~il~-k~G~~v~~ 96 (112)
T 3iv4_A 67 DLSDYIAKKTNVKHESPQAFYF-VNGEMVWN 96 (112)
T ss_dssp HHHHHHHHHHTCCCCSSEEEEE-ETTEEEEE
T ss_pred hhhHHHHHHhCCccCCCeEEEE-ECCEEEEE
Confidence 56678999999995 9999999 68887743
No 209
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=90.30 E-value=0.73 Score=44.11 Aligned_cols=61 Identities=3% Similarity=-0.110 Sum_probs=41.7
Q ss_pred CcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
++.++++|.+.||++|. .+.+. +.++. .++.++.|-+ |.+
T Consensus 136 ~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-----~~v~~~~vd~--------~~~------------------------ 178 (229)
T 2ywm_A 136 IPIEIWVFVTTSCGYCPSAAVMAWDFALAN-----DYITSKVIDA--------SEN------------------------ 178 (229)
T ss_dssp SCEEEEEEECTTCTTHHHHHHHHHHHHHHC-----TTEEEEEEEG--------GGC------------------------
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHC-----CCeEEEEEEC--------CCC------------------------
Confidence 55668899999998874 35566 66553 2466666643 211
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCce
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRI 437 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv 437 (691)
..+.+.|++++.|++++ +|++
T Consensus 179 ---~~l~~~~~v~~~Pt~~~---~G~~ 199 (229)
T 2ywm_A 179 ---QDLAEQFQVVGVPKIVI---NKGV 199 (229)
T ss_dssp ---HHHHHHTTCCSSSEEEE---GGGT
T ss_pred ---HHHHHHcCCcccCEEEE---CCEE
Confidence 12556799999999999 7774
No 210
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=90.15 E-value=0.71 Score=36.19 Aligned_cols=58 Identities=9% Similarity=-0.058 Sum_probs=38.4
Q ss_pred EEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCchHHHH
Q 044391 338 LLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEPAVVK 414 (691)
Q Consensus 338 lL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~~~~r 414 (691)
-+.|.+.||++|.. +.|. +.+++. .+++++-| | + .
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~----~~~~~~~v----------~---------------------~---~---- 40 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELG----IDAEFEKI----------K---------------------E---M---- 40 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTT----CCEEEEEE----------C---------------------S---H----
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcC----CceEEEEe----------c---------------------C---H----
Confidence 35666779988753 5566 666643 34666554 2 1 1
Q ss_pred HHHHhhCcCCceEEEEeCCCCceecc
Q 044391 415 YAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 415 ~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
.+.+.|++++.|++++ +|+++..
T Consensus 41 ~~~~~~~v~~~Pt~~~---~G~~~~~ 63 (77)
T 1ilo_A 41 DQILEAGLTALPGLAV---DGELKIM 63 (77)
T ss_dssp HHHHHHTCSSSSCEEE---TTEEEEC
T ss_pred HHHHHCCCCcCCEEEE---CCEEEEc
Confidence 2345689999999999 8988754
No 211
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=89.84 E-value=0.36 Score=53.54 Aligned_cols=68 Identities=6% Similarity=-0.136 Sum_probs=46.6
Q ss_pred CcEEEEEEecCCCChhh--hHHHH-HHHHhhccCC----CCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCC
Q 044391 334 RKHVLLLISSLDLSDEE--ILVLH-LYREHKAREE----FDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPT 406 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~----~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d 406 (691)
+|.|+++|.+.||++|. .+.+. ++++++.+.+ +++.++=|-+ |+.
T Consensus 42 ~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~--------d~~-------------------- 93 (470)
T 3qcp_A 42 LCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNC--------ASE-------------------- 93 (470)
T ss_dssp GSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEET--------TTC--------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEEC--------CCC--------------------
Confidence 47899999999998874 36788 8877763312 1344444422 211
Q ss_pred CCchHHHHHHHHhhCcCCceEEEEeCCCCc
Q 044391 407 IIEPAVVKYAKEVWKFSKKAILVPVDPQGR 436 (691)
Q Consensus 407 ~i~~~~~r~ike~f~~~~iP~LVvL~pqGk 436 (691)
+.+.+.|++++.|+++++++.|.
T Consensus 94 -------~~la~~y~V~~~PTlilf~~gg~ 116 (470)
T 3qcp_A 94 -------VDLCRKYDINFVPRLFFFYPRDS 116 (470)
T ss_dssp -------HHHHHHTTCCSSCEEEEEEESSC
T ss_pred -------HHHHHHcCCCccCeEEEEECCCc
Confidence 13566799999999999987764
No 212
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=89.82 E-value=0.063 Score=46.77 Aligned_cols=18 Identities=11% Similarity=0.014 Sum_probs=16.5
Q ss_pred CcccccCChhhHHHHHhh
Q 044391 450 GNLAFPFSAEKEAALWKA 467 (691)
Q Consensus 450 G~~AFPFT~~r~e~L~~~ 467 (691)
|++|||||.+|+++|.++
T Consensus 1 ~~~a~pfte~~~~~~~~~ 18 (89)
T 1v5n_A 1 GSSGSSGTEERLKEIEAK 18 (89)
T ss_dssp CCCCCCCCSSCCSHHHHH
T ss_pred CCcccccCHHHHHHHHHH
Confidence 899999999999999765
No 213
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=89.63 E-value=0.47 Score=41.96 Aligned_cols=57 Identities=12% Similarity=0.267 Sum_probs=43.3
Q ss_pred chhhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHhC--CceeeEEecccChHHHHhhhh
Q 044391 480 DATILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAAQ--INLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 480 d~~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a~--~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
...+.+. .||.+.|||.+ .|| +.+.+.+.+++++.+ ..+++++|+-|...+.+++.+
T Consensus 20 ~~~l~~~--~gk~vll~F~a--~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~ 81 (146)
T 1o8x_A 20 EVEVKSL--AGKLVFFYFSA--SWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYF 81 (146)
T ss_dssp EEEGGGG--TTCEEEEEEEC--TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHH
T ss_pred CCcHHHh--CCCEEEEEEEc--cCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHH
Confidence 3344444 79999999999 565 888899988877644 589999999987666666544
No 214
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=89.48 E-value=1.8 Score=46.31 Aligned_cols=65 Identities=8% Similarity=-0.085 Sum_probs=44.8
Q ss_pred CcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
|+.|+++|.+.||++|. .+.+. +.++++.+ +.++-|-+ |.+
T Consensus 21 ~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~----v~~~~vd~--------~~~------------------------ 64 (481)
T 3f8u_A 21 AGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI----VPLAKVDC--------TAN------------------------ 64 (481)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT----CCEEEEET--------TTC------------------------
T ss_pred CCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc----eEEEEEEC--------CCC------------------------
Confidence 48999999999998874 36677 77777532 34443322 211
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
+.+.+.|++++.|+++++ .+|+.+
T Consensus 65 ---~~l~~~~~v~~~Ptl~~~-~~g~~~ 88 (481)
T 3f8u_A 65 ---TNTCNKYGVSGYPTLKIF-RDGEEA 88 (481)
T ss_dssp ---HHHHHHTTCCEESEEEEE-ETTEEE
T ss_pred ---HHHHHhcCCCCCCEEEEE-eCCcee
Confidence 235677999999999999 567543
No 215
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=89.28 E-value=0.57 Score=41.00 Aligned_cols=59 Identities=12% Similarity=0.144 Sum_probs=42.8
Q ss_pred chhhhhhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhC--CceeeEEecccChHHHHhhhh
Q 044391 480 DATILEWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQ--INLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 480 d~~I~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~--~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
...+.+. .||.+.|||.+.+ ..|+.+.+.+.++++..+ ..++++.|+-|...+.+++.+
T Consensus 20 ~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~ 81 (144)
T 1o73_A 20 EVSLGSL--VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYY 81 (144)
T ss_dssp CBCSGGG--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHH
T ss_pred cCcHHHh--CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHH
Confidence 3344455 7999999999832 334888888888877643 589999999987666665544
No 216
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=89.04 E-value=0.66 Score=39.56 Aligned_cols=24 Identities=4% Similarity=-0.111 Sum_probs=18.4
Q ss_pred HHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 413 VKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 413 ~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
...+.+.+++++.|++ ++ +|+.+.
T Consensus 62 ~~~l~~~~~v~~~Pt~-~~--~g~~v~ 85 (116)
T 2e7p_A 62 QSALAHWTGRGTVPNV-FI--GGKQIG 85 (116)
T ss_dssp HHHHHHHHSCCSSCEE-EE--TTEEEE
T ss_pred HHHHHHHhCCCCcCEE-EE--CCEEEC
Confidence 4567778999999999 44 687764
No 217
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=88.69 E-value=2.3 Score=44.56 Aligned_cols=71 Identities=8% Similarity=0.042 Sum_probs=45.1
Q ss_pred cCcEEEEEEecCCCChhhh-HHH---H-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCC
Q 044391 333 RRKHVLLLISSLDLSDEEI-LVL---H-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTI 407 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~-~~L---~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~ 407 (691)
.++.|++.|.|.||++|.+ +.| . +|+++.+..+. ..|.+.-+ |- ++.
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~-~~v~~~~V-d~-----~~~--------------------- 80 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLED-KGVGFGLV-DS-----EKD--------------------- 80 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTT-TTEEEEEE-ET-----TTT---------------------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhc-CCceEEEE-eC-----ccc---------------------
Confidence 4789999999999988754 322 2 56665432121 13555543 31 111
Q ss_pred CchHHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 408 IEPAVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 408 i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
+-|.++|++++.|+++++. +|+.+
T Consensus 81 ------~~l~~~~~V~~~PTl~~f~-~G~~~ 104 (367)
T 3us3_A 81 ------AAVAKKLGLTEEDSIYVFK-EDEVI 104 (367)
T ss_dssp ------HHHHHHHTCCSTTEEEEEE-TTEEE
T ss_pred ------HHHHHHcCCCcCceEEEEE-CCcEE
Confidence 1366779999999999997 57654
No 218
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=88.32 E-value=0.56 Score=49.23 Aligned_cols=73 Identities=11% Similarity=0.036 Sum_probs=48.4
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.|+++|.+.||++|. .+.+. +.++++......-.|+++-+ | .+ . +
T Consensus 21 ~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~V-d-------~~-------------------~--~ 71 (382)
T 2r2j_A 21 NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARV-D-------CD-------------------Q--H 71 (382)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEE-E-------TT-------------------T--C
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEE-E-------CC-------------------c--c
Confidence 479999999999998874 36788 88888643111112555543 2 11 0 1
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+.|.+.|++++.|+++++ .+|+.+.
T Consensus 72 ----~~l~~~~~v~~~Pt~~~f-~~G~~~~ 96 (382)
T 2r2j_A 72 ----SDIAQRYRISKYPTLKLF-RNGMMMK 96 (382)
T ss_dssp ----HHHHHHTTCCEESEEEEE-ETTEEEE
T ss_pred ----HHHHHhcCCCcCCEEEEE-eCCcEee
Confidence 235667999999999987 5787653
No 219
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=87.89 E-value=0.33 Score=49.92 Aligned_cols=39 Identities=13% Similarity=0.041 Sum_probs=28.1
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEE
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWL 373 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwI 373 (691)
.+|.|+++|.+.||++|. .+.|. ++++++.+ .++.++.|
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~--~~v~~~~v 307 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH--ENIVIAKM 307 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTC--SSEEEEEE
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccC--CcEEEEEE
Confidence 589999999999998874 36677 87777643 23444444
No 220
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=87.77 E-value=0.75 Score=40.45 Aligned_cols=50 Identities=18% Similarity=0.347 Sum_probs=40.3
Q ss_pred CCcEEEEEccCChhHH---HHHHHHHHHHHHHhC--CceeeEEecccChHHHHhhhh
Q 044391 489 EERYICLYGGGDIEWI---RRFTTSAKAVARAAQ--INLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 489 egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a~--~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.||.+.|||.+ .|| +.+.+.+.++++..+ ..++++.|+-|...+.+++.+
T Consensus 27 ~gk~vll~F~a--~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~ 81 (144)
T 1i5g_A 27 AGKTVFFYFSA--SWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYY 81 (144)
T ss_dssp TTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHH
T ss_pred CCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHH
Confidence 79999999999 565 888889988877644 589999999987666666544
No 221
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=87.60 E-value=0.68 Score=42.60 Aligned_cols=58 Identities=10% Similarity=0.111 Sum_probs=43.6
Q ss_pred hhhhhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhC--CceeeEEecccChHHHHhhhhh
Q 044391 482 TILEWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQ--INLGMAYVGKNNAKERFRKISR 541 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~--~~~E~v~Vgkdn~~e~v~~~~~ 541 (691)
.+.+. .||.+.|||.+.+ ..|+++.+.+.++++... ..++++.|+-|...+.+++.++
T Consensus 42 ~l~~~--~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~ 102 (165)
T 3s9f_A 42 DMDSL--SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYA 102 (165)
T ss_dssp CSGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHT
T ss_pred cHHHc--CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHH
Confidence 33444 7999999999833 334899999999877643 4899999999877777766553
No 222
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=86.67 E-value=0.048 Score=47.68 Aligned_cols=26 Identities=8% Similarity=-0.130 Sum_probs=20.7
Q ss_pred eeecceecCcEEEEEEecCCCChhhh
Q 044391 326 RVNIEVLRRKHVLLLISSLDLSDEEI 351 (691)
Q Consensus 326 kV~Is~L~gK~VlL~fSal~~~~~e~ 351 (691)
++.++...||.+.+.|.+.||++|.-
T Consensus 4 ~~~la~~~~k~~vV~F~A~WC~~C~~ 29 (106)
T 3kp8_A 4 AVGLAAHLRQIGGTMYGAYWCPHCQD 29 (106)
T ss_dssp HHHHHHHHHHHTCEEEECTTCHHHHH
T ss_pred hhHHHHhcCCCEEEEEECCCCHHHHH
Confidence 34566677889999999999998853
No 223
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=86.48 E-value=0.063 Score=48.82 Aligned_cols=71 Identities=10% Similarity=-0.003 Sum_probs=45.9
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+.+.++++|.+.||++|.. ..+. .|....+ ...+.++.|=+ +++. | ++
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~--~~~~~l~~vdv--------~~~~----------~------~~--- 67 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDE--GRAAPVQRLQM--------RDPL----------P------PG--- 67 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHH--HHHSCEEEEET--------TSCC----------C------TT---
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhh--cccceEEEEEC--------CCCC----------c------hh---
Confidence 4578999999999999864 2344 6665321 23477888765 1110 0 11
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+...+++.++|+||+++ +|+.+.
T Consensus 68 ------la~~~~V~g~PT~i~f~-~G~ev~ 90 (116)
T 3dml_A 68 ------LELARPVTFTPTFVLMA-GDVESG 90 (116)
T ss_dssp ------CBCSSCCCSSSEEEEEE-TTEEEE
T ss_pred ------HHHHCCCCCCCEEEEEE-CCEEEe
Confidence 11236789999999999 999876
No 224
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=85.55 E-value=1.7 Score=47.05 Aligned_cols=65 Identities=5% Similarity=-0.204 Sum_probs=45.2
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.|+++|.+.||++|.- +.+. +.++++. .++.++-|-. |.+
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~---~~v~~~~vd~--------~~~----------------------- 75 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVE---KNITLAQIDC--------TEN----------------------- 75 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TTCEEEEEET--------TTC-----------------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcc---CCeEEEEEEC--------CCC-----------------------
Confidence 4799999999999988743 5676 7666652 2455555432 111
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCc
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGR 436 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGk 436 (691)
+.+.+.|++++.|+++++.. |+
T Consensus 76 ----~~l~~~~~v~~~Pt~~~~~~-g~ 97 (504)
T 2b5e_A 76 ----QDLCMEHNIPGFPSLKIFKN-SD 97 (504)
T ss_dssp ----HHHHHHTTCCSSSEEEEEET-TC
T ss_pred ----HHHHHhcCCCcCCEEEEEeC-Cc
Confidence 23667799999999999964 55
No 225
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=84.45 E-value=2.2 Score=35.02 Aligned_cols=51 Identities=8% Similarity=0.015 Sum_probs=39.3
Q ss_pred hhhhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccChH
Q 044391 483 ILEWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNAK 533 (691)
Q Consensus 483 I~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~~ 533 (691)
+...++.||.+++||.+++ .+|+.+.+.+.++++..+..+.++.|.-+...
T Consensus 14 ~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 65 (109)
T 3tco_A 14 FDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQ 65 (109)
T ss_dssp HHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCH
Confidence 3444668999999999955 66699999999998876667888888776443
No 226
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=84.41 E-value=0.44 Score=46.52 Aligned_cols=44 Identities=5% Similarity=-0.130 Sum_probs=33.5
Q ss_pred hcCCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCceeccc
Q 044391 394 QAMMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQN 441 (691)
Q Consensus 394 ~~~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~N 441 (691)
+..+||.+|++-+. ..+.+.++|++++.|+||+++++|++...|
T Consensus 179 ~~~~~~i~v~~~~~----~~~~l~~~f~v~~~Pslvl~~~~g~~~~~~ 222 (244)
T 3q6o_A 179 LSQHKGVAVRRVLN----TEANVVRKFGVTDFPSCYLLFRNGSVSRVP 222 (244)
T ss_dssp TTTCTTEEEEEEET----TCHHHHHHHTCCCSSEEEEEETTSCEEECC
T ss_pred hccCCceEEEEEeC----chHHHHHHcCCCCCCeEEEEeCCCCeEeec
Confidence 44567777776441 124566679999999999999999999887
No 227
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=84.26 E-value=1.2 Score=39.27 Aligned_cols=50 Identities=12% Similarity=0.067 Sum_probs=39.0
Q ss_pred CCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhhh
Q 044391 489 EERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 489 egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.||.+.|+|.+ .|| +...+.+.++.++. +..++++.|+-|...+.+++.+
T Consensus 31 ~gk~vll~F~a--~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~ 84 (143)
T 4fo5_A 31 LGRYTLLNFWA--AYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETV 84 (143)
T ss_dssp SCCEEEEEEEC--TTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHH
T ss_pred CCCEEEEEEEc--CcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHH
Confidence 78999999998 566 77777888886653 3579999999997666666544
No 228
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=83.72 E-value=2.3 Score=43.82 Aligned_cols=71 Identities=13% Similarity=0.047 Sum_probs=43.8
Q ss_pred cCcEEEEEEecCCCChhh-hHH---HH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCC
Q 044391 333 RRKHVLLLISSLDLSDEE-ILV---LH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTI 407 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e-~~~---L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~ 407 (691)
.+|.|++.|.|.||+... .+. +. +|+++.+..++. .|.++-+ |- |++
T Consensus 27 ~~~~~lV~F~a~wC~c~~~~p~~~~~~~~~~~~a~~~~~~-~v~~~~V-d~-----~~~--------------------- 78 (350)
T 1sji_A 27 KYDVLCLYYHESVSSDKVAQKQFQLKEIVLELVAQVLEHK-DIGFVMV-DA-----KKE--------------------- 78 (350)
T ss_dssp TCSEEEEEEECCSCSSSTTSHHHHHHHHHHHHHHHHGGGS-SEEEEEE-ET-----TTT---------------------
T ss_pred hCCeEEEEEECCCCcchhhCchhhhhhHHHHHHHHHHhhc-CcEEEEE-eC-----CCC---------------------
Confidence 378999999999997322 244 34 455543322221 3555543 21 211
Q ss_pred CchHHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 408 IEPAVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 408 i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
+.+.+.|++++.|+++++ .+|++.
T Consensus 79 ------~~l~~~~~v~~~Pt~~~~-~~g~~~ 102 (350)
T 1sji_A 79 ------AKLAKKLGFDEEGSLYVL-KGDRTI 102 (350)
T ss_dssp ------HHHHHHHTCCSTTEEEEE-ETTEEE
T ss_pred ------HHHHHhcCCCccceEEEE-ECCcEE
Confidence 135677999999999999 678743
No 229
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=83.30 E-value=9.6 Score=37.57 Aligned_cols=98 Identities=5% Similarity=-0.135 Sum_probs=52.2
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCC---------hhhHHHHH-HHhcCCCe
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWD---------EGYRQKFE-QLQAMMPW 399 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~---------D~d~~~F~-~~~~~MPW 399 (691)
.+|.++..|++.+||.|.- +.|. ..++ .+..|+|+++- ...+.+ ..++.+|- .+...+.=
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~------g~v~v~~~~~p-~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~ 168 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS------GKVQLRTLLVG-VIKPESPATAAAILASKDPAKTWQQYEASGGK 168 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT------TSEEEEEEECC-CSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC------CcEEEEEEECC-cCCCcHHHHHHHHHHccCHHHHHHHHHHHhcc
Confidence 3789999999999998853 3344 3332 35777887751 000111 11233332 22221100
Q ss_pred eeecCCCCCchHH------HHHHHHhhCcCCceEEEEeCCCCce
Q 044391 400 YTVQHPTIIEPAV------VKYAKEVWKFSKKAILVPVDPQGRI 437 (691)
Q Consensus 400 yAVp~~d~i~~~~------~r~ike~f~~~~iP~LVvL~pqGkv 437 (691)
-.+.-....+.+. ...+.+.+++++.|++++.+.+|++
T Consensus 169 ~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~ 212 (241)
T 1v58_A 169 LKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL 212 (241)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE
T ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE
Confidence 0000000011122 2345578999999999999989974
No 230
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=82.39 E-value=1.7 Score=38.81 Aligned_cols=87 Identities=6% Similarity=-0.054 Sum_probs=52.0
Q ss_pred CcEEEEEEecCCCChhhhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCchHH
Q 044391 334 RKHVLLLISSLDLSDEEILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEPAV 412 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~~~ 412 (691)
++.|+++|.+.||++|.. +. ++++|.++ -.+. .|+-+ |.++. +
T Consensus 23 ~~~vvv~F~a~wc~~C~~--~~p~l~~la~~-~~~v--~f~kv--------d~d~~----------------~------- 66 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLL--VNQHLSLLARK-FPET--KFVKA--------IVNSC----------------I------- 66 (118)
T ss_dssp TCEEEEEEECTTSHHHHH--HHHHHHHHHHH-CTTS--EEEEE--------EGGGT----------------S-------
T ss_pred CCeEEEEEeCCCChHHHH--HHHHHHHHHHH-CCCC--EEEEE--------EhHHh----------------H-------
Confidence 458999999999999864 33 44554433 2234 44443 22220 0
Q ss_pred HHHHHHhhCcCCceEEEEeCCCCceecccHHHHHHHhCcccccCChhhHHHHHh
Q 044391 413 VKYAKEVWKFSKKAILVPVDPQGRILNQNAFHMLWIWGNLAFPFSAEKEAALWK 466 (691)
Q Consensus 413 ~r~ike~f~~~~iP~LVvL~pqGkv~~~NA~~mI~~wG~~AFPFT~~r~e~L~~ 466 (691)
+.|+++++|+++++- +|+.+..-. +. ...|-+ -||.+.+|..-+
T Consensus 67 -----~~~~v~~~PT~~~fk-~G~~v~~~~-G~-~~~gg~--~~~~~~le~~L~ 110 (118)
T 3evi_A 67 -----QHYHDNCLPTIFVYK-NGQIEAKFI-GI-IECGGI--NLKLEELEWKLA 110 (118)
T ss_dssp -----TTCCGGGCSEEEEEE-TTEEEEEEE-ST-TTTTCS--SCCHHHHHHHHH
T ss_pred -----HHCCCCCCCEEEEEE-CCEEEEEEe-Ch-hhhCCC--CCCHHHHHHHHH
Confidence 347899999999995 787775421 11 122222 588877776543
No 231
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=82.38 E-value=2.5 Score=36.59 Aligned_cols=50 Identities=16% Similarity=0.241 Sum_probs=40.4
Q ss_pred CCcEEEEEccCChhHH---HHHHHHHHHHHHHh--CCceeeEEecccChHHHHhhhh
Q 044391 489 EERYICLYGGGDIEWI---RRFTTSAKAVARAA--QINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 489 egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a--~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.||.+.|||.+ .|| +...+.+.++++.. +..++++.|+-|...+.+++..
T Consensus 32 ~gk~vll~F~~--~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~ 86 (148)
T 3fkf_A 32 RNRYLLLNFWA--SWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAI 86 (148)
T ss_dssp TTSEEEEEEEC--GGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHH
T ss_pred CCcEEEEEEEC--CCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHH
Confidence 79999999998 777 89999999997764 3459999999887766666544
No 232
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=81.13 E-value=2.3 Score=37.72 Aligned_cols=55 Identities=13% Similarity=0.074 Sum_probs=40.9
Q ss_pred hhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhhh
Q 044391 482 TILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.+.+. .||.+.|+|.+ .|| +...+.+.++++.. +..++++.|+-|...+.+++.+
T Consensus 23 ~l~~~--~gk~vll~F~a--~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~ 81 (152)
T 2lrn_A 23 SLNDF--KGKYVLVDFWF--AGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAI 81 (152)
T ss_dssp ESGGG--TTSEEEEEEEC--TTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHH
T ss_pred eHHHc--CCCEEEEEEEC--CCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHH
Confidence 34444 79999999988 565 88888888887664 3469999999886666665543
No 233
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=80.68 E-value=1.2 Score=42.80 Aligned_cols=65 Identities=11% Similarity=0.036 Sum_probs=42.3
Q ss_pred CcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCch
Q 044391 334 RKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEP 410 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~ 410 (691)
+|.|++-|+|.||+||.. ++|. +=++.. +...|+=|=+ |+. |+
T Consensus 41 ~k~VVVdF~A~WCgPCk~m~PvleelA~e~~----~~v~f~kVDV--------De~------------------~e---- 86 (160)
T 2av4_A 41 ERLVCIRFGHDYDPDCMKMDELLYKVADDIK----NFCVIYLVDI--------TEV------------------PD---- 86 (160)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHT----TTEEEEEEET--------TTC------------------CT----
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHcc----CCcEEEEEEC--------CCC------------------HH----
Confidence 678999999999999864 5565 544442 2344444422 211 11
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
+.+.|+++.+|+++++- +|+.+
T Consensus 87 -----~a~~y~V~siPT~~fFk-~G~~v 108 (160)
T 2av4_A 87 -----FNTMYELYDPVSVMFFY-RNKHM 108 (160)
T ss_dssp -----TTTTTTCCSSEEEEEEE-TTEEE
T ss_pred -----HHHHcCCCCCCEEEEEE-CCEEE
Confidence 24558999999999884 66665
No 234
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=80.17 E-value=9 Score=36.92 Aligned_cols=94 Identities=11% Similarity=0.089 Sum_probs=50.1
Q ss_pred CcEEEEEEecCCCChhhh--HHHHHHHHhhccCCCCeeEEEE--eccc-CCC-------CCC-hhhHHHHHHHhcCCCee
Q 044391 334 RKHVLLLISSLDLSDEEI--LVLHLYREHKAREEFDYAIVWL--PIVD-RSI-------AWD-EGYRQKFEQLQAMMPWY 400 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~--~~L~iY~~lk~~~~~~fEIVwI--piVd-~s~-------~W~-D~d~~~F~~~~~~MPWy 400 (691)
+|.+...|++.|||.|.- +.|. ++.+. +.+|+|+ |+.. ++. -|- ....+.|.+.+..-+
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~---~~~~~---~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~-- 157 (211)
T 1t3b_A 86 EKHVVTVFMDITCHYCHLLHQQLK---EYNDL---GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNL-- 157 (211)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHH---HHHHT---TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCC--
T ss_pred CCEEEEEEECCCCHhHHHHHHHHH---HHHhC---CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCC--
Confidence 789999999999999853 3344 23322 3666665 5411 000 000 011233444443321
Q ss_pred eecCCC-CCchHHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 401 TVQHPT-IIEPAVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 401 AVp~~d-~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
++... .........+.+.+++++.|++++ .+|+.+
T Consensus 158 -~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi--~nG~~~ 193 (211)
T 1t3b_A 158 -PKEVKTPNIVKKHYELGIQFGVRGTPSIVT--STGELI 193 (211)
T ss_dssp -CSSCCCSSHHHHHHHHHHHHTCCSSCEEEC--TTSCCC
T ss_pred -CChHHHHHHHHHHHHHHHHcCCCcCCEEEE--eCCEEe
Confidence 22111 011223345668899999999998 568643
No 235
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=80.17 E-value=3.4 Score=33.76 Aligned_cols=46 Identities=9% Similarity=-0.013 Sum_probs=36.0
Q ss_pred hhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 486 WMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 486 ~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.++.||.+.+||.+++ .+|+.+.+.+.++++..+..+.++.|.-++
T Consensus 14 ~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~ 60 (109)
T 2yzu_A 14 TLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDE 60 (109)
T ss_dssp HHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT
T ss_pred HhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCC
Confidence 3568899999999844 556999999999988766568888887664
No 236
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=80.09 E-value=4 Score=33.31 Aligned_cols=45 Identities=4% Similarity=-0.129 Sum_probs=36.4
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccChH
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNAK 533 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~~ 533 (691)
.+|.+.+||.+++ .+|+.+.+.+.++++..+..+.++.|.-++..
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 63 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENP 63 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCH
Confidence 8899999999855 56699999999998886666888888777543
No 237
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=80.08 E-value=2.4 Score=37.23 Aligned_cols=52 Identities=8% Similarity=-0.127 Sum_probs=38.4
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhhh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.||.+.|||.+.+ ..|+.+.+.+.++++.. +..++++.|+.+...+.+++..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~ 80 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFL 80 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHH
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHH
Confidence 7999999998733 44588888888887764 3359999999886665555543
No 238
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=80.05 E-value=1.9 Score=37.44 Aligned_cols=51 Identities=12% Similarity=0.037 Sum_probs=39.3
Q ss_pred CCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhhhh
Q 044391 489 EERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKISR 541 (691)
Q Consensus 489 egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~~~ 541 (691)
.||.+.|||.+ .|| +...+.+.++.+.. +..++++.|+-+...+.+++.++
T Consensus 30 ~gk~vll~f~~--~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~ 84 (148)
T 3hcz_A 30 QAKYTILFFWD--SQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIR 84 (148)
T ss_dssp CCSEEEEEEEC--GGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHH
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHH
Confidence 89999999998 677 78888888886663 33599999999866666655443
No 239
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=79.21 E-value=3 Score=36.51 Aligned_cols=51 Identities=14% Similarity=0.150 Sum_probs=40.2
Q ss_pred CCcEEEEEccCChhHH---HHHHHHHHH---HHHH-hCCceeeEEecccChHHHHhhhhh
Q 044391 489 EERYICLYGGGDIEWI---RRFTTSAKA---VARA-AQINLGMAYVGKNNAKERFRKISR 541 (691)
Q Consensus 489 egK~I~LYgG~D~~Wi---r~FT~~~~~---Ik~~-a~~~~E~v~Vgkdn~~e~v~~~~~ 541 (691)
.||.+.|||-+ .|| +...+.+.+ +++. .+..++++.|+.|+..+.+++.++
T Consensus 30 ~gk~vll~F~a--~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~ 87 (142)
T 3eur_A 30 PAEYTLLFINN--PGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRN 87 (142)
T ss_dssp CCSEEEEEECC--SSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGG
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHH
Confidence 68999999988 555 888888888 7655 357899999999988777766554
No 240
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=78.77 E-value=7.1 Score=37.77 Aligned_cols=69 Identities=13% Similarity=0.033 Sum_probs=42.5
Q ss_pred CcEEEEEEec-------CCCChhhh--HHHH-HHHHhh-ccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeee
Q 044391 334 RKHVLLLISS-------LDLSDEEI--LVLH-LYREHK-AREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTV 402 (691)
Q Consensus 334 gK~VlL~fSa-------l~~~~~e~--~~L~-iY~~lk-~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAV 402 (691)
+..|+++|.| .||.+|.. ++++ +=++.+ ..+++ .|+|.- || .|+.+
T Consensus 37 ~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~--~v~f~k-vD-----~d~~~--------------- 93 (178)
T 3ga4_A 37 GYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQS--LNLFFT-VD-----VNEVP--------------- 93 (178)
T ss_dssp TCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTC--CEEEEE-EE-----TTTCH---------------
T ss_pred CCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCC--CEEEEE-EE-----CccCH---------------
Confidence 5679999999 49988753 4555 444433 11122 355553 34 13222
Q ss_pred cCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCce
Q 044391 403 QHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRI 437 (691)
Q Consensus 403 p~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv 437 (691)
-|.+.|+++++|+|+++-+.|+.
T Consensus 94 ------------~la~~~~I~siPtl~~F~~g~~~ 116 (178)
T 3ga4_A 94 ------------QLVKDLKLQNVPHLVVYPPAESN 116 (178)
T ss_dssp ------------HHHHHTTCCSSCEEEEECCCCGG
T ss_pred ------------HHHHHcCCCCCCEEEEEcCCCCC
Confidence 34455899999999999877654
No 241
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=78.49 E-value=2.6 Score=35.71 Aligned_cols=51 Identities=8% Similarity=-0.063 Sum_probs=38.3
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccChHHHHhhhh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.||.+.|+|.+.+ ..|+.+.+.+.++++..+ .++++.|+.+...+.+++..
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~ 75 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFV 75 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHH
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHH
Confidence 7899999998732 344888888888877755 89999999876556665544
No 242
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=78.26 E-value=4.1 Score=33.42 Aligned_cols=47 Identities=9% Similarity=-0.050 Sum_probs=35.9
Q ss_pred hhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 486 WMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 486 ~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
-++.||.+.++|.+++ .+|+.+.+.+.++++..+..+.++.|.-+..
T Consensus 13 ~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~ 60 (105)
T 1nsw_A 13 AIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDEN 60 (105)
T ss_dssp HHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTC
T ss_pred HHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCC
Confidence 3568899999998854 5569999999999887555678887776643
No 243
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=78.22 E-value=3.6 Score=36.45 Aligned_cols=52 Identities=6% Similarity=-0.096 Sum_probs=38.1
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhhh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.||.+.|||.+.+ ..|+.+.+.+.++++.. +..++++.|.-+...+.+++.+
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~ 86 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYM 86 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHH
Confidence 7899999998832 33488888888887664 3459999999886555555543
No 244
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=77.60 E-value=3.5 Score=36.46 Aligned_cols=60 Identities=5% Similarity=-0.032 Sum_probs=40.7
Q ss_pred ccCchhhhhhhcCCcEEEEEccCChhHH---HHH-HHHHHHHHHHh-CCceeeEEeccc------ChHHHHhhhh
Q 044391 477 DDIDATILEWMKEERYICLYGGGDIEWI---RRF-TTSAKAVARAA-QINLGMAYVGKN------NAKERFRKIS 540 (691)
Q Consensus 477 d~id~~I~~~i~egK~I~LYgG~D~~Wi---r~F-T~~~~~Ik~~a-~~~~E~v~Vgkd------n~~e~v~~~~ 540 (691)
+|-...+.++ .||.+.|+|.+ .|| +.. .+.+.++++.. +..++++.|+.+ +..+.+++..
T Consensus 19 ~g~~~~l~~~--~gk~vlv~F~a--~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~ 89 (160)
T 3lor_A 19 NHEGLSNEDL--RGKVVVVEVFQ--MLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFI 89 (160)
T ss_dssp SSCCCCHHHH--TTSEEEEEEEC--TTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHH
T ss_pred CCCccCHHHh--CCCEEEEEEEc--CCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHH
Confidence 4433345555 79999999998 466 774 78888887764 346999999863 3445555544
No 245
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=77.43 E-value=2.4 Score=34.14 Aligned_cols=18 Identities=22% Similarity=0.154 Sum_probs=14.6
Q ss_pred HhhCcCCceEEEEeCCCCcee
Q 044391 418 EVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 418 e~f~~~~iP~LVvL~pqGkv~ 438 (691)
+.+++++.|++++ +|+++
T Consensus 49 ~~~gv~~vPt~~i---~g~~~ 66 (80)
T 2k8s_A 49 EKAGVKSVPALVI---DGAAF 66 (80)
T ss_dssp HHHTCCEEEEEEE---TTEEE
T ss_pred HHcCCCcCCEEEE---CCEEE
Confidence 4579999999988 78754
No 246
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=77.39 E-value=3.9 Score=34.34 Aligned_cols=39 Identities=10% Similarity=-0.047 Sum_probs=30.9
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEe
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYV 527 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~V 527 (691)
.||.+.|||.+.+ ..|+...+.+.++++..+..+.++.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i 60 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTV 60 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEE
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 7999999999833 33488888888887776778888888
No 247
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=77.36 E-value=2.6 Score=37.85 Aligned_cols=54 Identities=0% Similarity=-0.041 Sum_probs=39.9
Q ss_pred hhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhh
Q 044391 482 TILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKI 539 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~ 539 (691)
.+.++ .||.+.|+|.+ .|| +...+.+.++++.. +..++++.|+.|...+.+++.
T Consensus 29 ~l~~~--~gk~vll~F~a--~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~ 86 (152)
T 2lrt_A 29 SLTDL--KGKVVLIDFTV--YNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTS 86 (152)
T ss_dssp CTTTG--GGSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHH
T ss_pred eHHHh--CCCEEEEEEEc--CCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHH
Confidence 34445 78999999998 576 77777888876653 346999999999776665553
No 248
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=77.17 E-value=5.4 Score=32.59 Aligned_cols=44 Identities=7% Similarity=-0.021 Sum_probs=34.7
Q ss_pred cCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 488 KEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 488 ~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
+.||.+.+||.+++ .+|+.+.+.+.++++..+..+.++.|.-++
T Consensus 18 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~ 62 (107)
T 2i4a_A 18 KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDD 62 (107)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTT
T ss_pred hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCC
Confidence 58899999999854 556999999999987755568888777664
No 249
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=77.09 E-value=8.6 Score=37.06 Aligned_cols=92 Identities=13% Similarity=0.113 Sum_probs=50.1
Q ss_pred cCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEe--cccCCCC---------CCh-hhHHHHHHHhcCC
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLP--IVDRSIA---------WDE-GYRQKFEQLQAMM 397 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIp--iVd~s~~---------W~D-~d~~~F~~~~~~M 397 (691)
.||.+++.|++.|||.|.- +.|. +.+ . +..|+++. +... .+ |.. +..+.|.+....-
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~----~---~v~v~~~~~p~~~~-~~~s~~~a~a~~~a~d~~~~~~~~~~~~ 156 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNA----L---GITVRYLAFPRQGL-DSDAEKEMKAIWCAKDKNKAFDDVMAGK 156 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHH----T---TEEEEEEECCTTCS-SSHHHHHHHHHHTSSSHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHh----C---CcEEEEEECCccCC-CchHHHHHHHHHhccCHHHHHHHHHhCC
Confidence 4899999999999998853 4466 433 1 36677664 3110 00 000 1123344433332
Q ss_pred CeeeecCCC-CCchHHHHHHHHhhCcCCceEEEEeCCCCce
Q 044391 398 PWYTVQHPT-IIEPAVVKYAKEVWKFSKKAILVPVDPQGRI 437 (691)
Q Consensus 398 PWyAVp~~d-~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv 437 (691)
+ ++++. .........+.+.+++++.|++++. +|+.
T Consensus 157 ~---~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~--dG~~ 192 (216)
T 1eej_A 157 S---VAPASCDVDIADHYALGVQLGVSGTPAVVLS--NGTL 192 (216)
T ss_dssp C---CCCCCCSCCHHHHHHHHHHHTCCSSSEEECT--TSCE
T ss_pred C---CChhHHHHHHHHHHHHHHHcCCCccCEEEEc--CCeE
Confidence 2 22211 0122334567788999999999764 4643
No 250
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=76.73 E-value=2.6 Score=36.59 Aligned_cols=57 Identities=11% Similarity=0.104 Sum_probs=39.1
Q ss_pred hhhhhhcCCcEEEEEccCCh-hHHHHHHHHHHH---HHHH-hCCceeeEEecccChHHHHhhhh
Q 044391 482 TILEWMKEERYICLYGGGDI-EWIRRFTTSAKA---VARA-AQINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~---Ik~~-a~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.+.+. .||.+.|+|.+.+ ..|+...+.+.+ +.+. .+..++++.|+-|...+.+++.+
T Consensus 21 ~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~ 82 (142)
T 3ewl_A 21 RMSRL--KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKA 82 (142)
T ss_dssp EGGGC--CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHH
T ss_pred Ehhhc--CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHH
Confidence 34445 7999999999832 334777766666 5444 24569999999887666665544
No 251
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=76.53 E-value=3.1 Score=44.99 Aligned_cols=66 Identities=14% Similarity=0.098 Sum_probs=43.7
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
.+|.|+++|.+.||++|. .+.+. +.++++.. +.+ |+++-+ |.+. +..
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-~~~--v~~~~v--------d~~~-------~~~------------ 424 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANA-TSD--VLIAKL--------DHTE-------NDV------------ 424 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHH-CSS--CEEEEE--------EGGG-------CCC------------
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhcc-CCc--EEEEEe--------cCCc-------ccc------------
Confidence 489999999999998874 36677 77776522 233 455543 2221 000
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCce
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRI 437 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv 437 (691)
.. |++++.|+++++ ++|+.
T Consensus 425 -------~~-~~v~~~Pt~~~~-~~G~~ 443 (504)
T 2b5e_A 425 -------RG-VVIEGYPTIVLY-PGGKK 443 (504)
T ss_dssp -------SS-CCCSSSSEEEEE-CCTTS
T ss_pred -------cc-CCceecCeEEEE-eCCce
Confidence 01 578999999999 78865
No 252
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=75.49 E-value=6.2 Score=32.46 Aligned_cols=45 Identities=13% Similarity=0.020 Sum_probs=35.3
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.+.||.+.++|.+++ .+|+.+.+.+.++++..+..+.++.|.-+.
T Consensus 17 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~ 62 (108)
T 2trx_A 17 LKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ 62 (108)
T ss_dssp TTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT
T ss_pred HhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCC
Confidence 357899999999944 556999999999988765568888887664
No 253
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=75.46 E-value=4.1 Score=36.45 Aligned_cols=44 Identities=5% Similarity=0.058 Sum_probs=35.8
Q ss_pred hhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHhCCceeeEEeccc
Q 044391 482 TILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a~~~~E~v~Vgkd 530 (691)
.+.+. .||.+.|+|.+ .|| +...+.+.++++..+ .++++.|+-+
T Consensus 31 ~l~~~--~gk~~lv~F~~--~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d 77 (165)
T 3ha9_A 31 SLNNV--GGDVVILWFMA--AWCPSCVYMADLLDRLTEKYR-EISVIAIDFW 77 (165)
T ss_dssp CGGGC--CSSEEEEEEEC--TTCTTHHHHHHHHHHHHHHCT-TEEEEEEECC
T ss_pred eHHHh--CCCEEEEEEEC--CCCcchhhhHHHHHHHHHHcC-CcEEEEEEec
Confidence 34444 89999999988 565 889999999987766 8999999887
No 254
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=75.40 E-value=5.7 Score=33.36 Aligned_cols=47 Identities=4% Similarity=-0.022 Sum_probs=35.6
Q ss_pred hhhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 484 LEWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 484 ~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.+.++.||.+.+||.+++ .+|+++.+.+.++++..+ .+.++.|.-+.
T Consensus 20 ~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~ 67 (112)
T 1syr_A 20 DSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDE 67 (112)
T ss_dssp HHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT
T ss_pred HHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCC
Confidence 344678999999999954 556999999999987733 47777776664
No 255
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=75.33 E-value=5.5 Score=32.72 Aligned_cols=45 Identities=7% Similarity=-0.072 Sum_probs=35.4
Q ss_pred cCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 488 KEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 488 ~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
+.||.+.++|.+++ .+|+.+.+.+.++++..+..+.++.|.-+..
T Consensus 17 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~ 62 (107)
T 1dby_A 17 ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDES 62 (107)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC
T ss_pred cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCC
Confidence 47899999998854 5669999999999887655688888877643
No 256
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=75.15 E-value=5.6 Score=33.07 Aligned_cols=46 Identities=11% Similarity=0.065 Sum_probs=35.6
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.+.||.+.++|.+++ .+|+.+.+.+.++++..+..+.++.|.-+..
T Consensus 20 ~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~ 66 (112)
T 1t00_A 20 LKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDEN 66 (112)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC
T ss_pred hhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCC
Confidence 357899999998844 4559999999999887655688888877643
No 257
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=74.98 E-value=4.9 Score=33.30 Aligned_cols=46 Identities=11% Similarity=0.015 Sum_probs=35.9
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.+.||.+.+||.+++ .+|+.+.+.+.++++..+..+.++.|.-+..
T Consensus 22 ~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~ 68 (115)
T 1thx_A 22 LKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPN 68 (115)
T ss_dssp TTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTC
T ss_pred hcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCC
Confidence 357899999999843 4469999999999887655688888877643
No 258
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=74.71 E-value=6.6 Score=33.07 Aligned_cols=49 Identities=0% Similarity=-0.079 Sum_probs=36.2
Q ss_pred hhhhhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 482 TILEWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.+...++.||.++++|.+++ .+|+.+.+.+.++++..+ .+.++.|.-+.
T Consensus 16 ~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-~~~~~~vd~~~ 65 (109)
T 3f3q_A 16 EFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDE 65 (109)
T ss_dssp HHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT
T ss_pred HHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCC
Confidence 34445778999999999954 556999999999987732 36667776653
No 259
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=74.62 E-value=6.9 Score=31.44 Aligned_cols=46 Identities=4% Similarity=0.008 Sum_probs=34.9
Q ss_pred hhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 486 WMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 486 ~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.++.||.+.+||.+++ .+|+.+.+.+.++++..+. +.++.|.-++.
T Consensus 12 ~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 58 (104)
T 2e0q_A 12 FLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDEN 58 (104)
T ss_dssp HHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTC
T ss_pred HHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCC
Confidence 3568899999999844 5569999999999877443 77888776643
No 260
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=74.55 E-value=3.8 Score=34.85 Aligned_cols=51 Identities=10% Similarity=0.023 Sum_probs=38.3
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccChHHHHhhhh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.||.+.|+|.+.+ ..|+.+.+.+.++++..+ .++++.|+-+...+.+++..
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~ 74 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFV 74 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHH
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHH
Confidence 7899999998732 334888888888877756 89999998886556665544
No 261
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=74.12 E-value=6 Score=33.26 Aligned_cols=45 Identities=7% Similarity=0.013 Sum_probs=34.9
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.+.||.+++||++++ .+|+++.+.+.++++..+..+.++.|.-+.
T Consensus 27 ~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~ 72 (121)
T 2i1u_A 27 LSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDT 72 (121)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCC
Confidence 457899999999844 556999999999988765567778777664
No 262
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=73.99 E-value=8.2 Score=31.42 Aligned_cols=44 Identities=7% Similarity=-0.067 Sum_probs=35.0
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.||.+.+||.+++ .+|+++.+.+.++++..+..+.++.|.-++.
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~ 63 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDEC 63 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTC
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccch
Confidence 7899999999854 5569999999999887656788888877643
No 263
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=73.93 E-value=6.1 Score=34.20 Aligned_cols=46 Identities=11% Similarity=-0.016 Sum_probs=36.5
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
...||.+.++|.+.+ ..|+++.+.+.++++..+..+.++.|.-+..
T Consensus 39 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~ 85 (128)
T 3ul3_B 39 NMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKN 85 (128)
T ss_dssp TSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGC
T ss_pred HccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCC
Confidence 458999999999944 4459999999999887666788888877643
No 264
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=73.92 E-value=7.5 Score=34.10 Aligned_cols=57 Identities=9% Similarity=-0.013 Sum_probs=40.1
Q ss_pred hhhhhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhhh
Q 044391 482 TILEWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.+.+. .||.+.|||.+.+ ..|+...+.+.++.+.. +..+.++.|+-+...+.+++..
T Consensus 20 ~l~~~--~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~ 78 (151)
T 2f9s_A 20 ELSDL--KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFM 78 (151)
T ss_dssp EGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHH
T ss_pred EHHHc--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHH
Confidence 34444 7999999998833 44488888888886653 3469999998876555555543
No 265
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=73.89 E-value=6.1 Score=33.76 Aligned_cols=46 Identities=9% Similarity=-0.013 Sum_probs=35.5
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.+.||.+++||.+++ ..|+++.+.+.++++..+..+.++.|.-++.
T Consensus 28 ~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~ 74 (119)
T 1w4v_A 28 VNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDH 74 (119)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTT
T ss_pred HcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCC
Confidence 357899999999844 5569999999999877555688888877643
No 266
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=73.09 E-value=3.9 Score=36.15 Aligned_cols=54 Identities=7% Similarity=-0.023 Sum_probs=39.3
Q ss_pred ccCchhhhhhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeeEEecccCh
Q 044391 477 DDIDATILEWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAA-QINLGMAYVGKNNA 532 (691)
Q Consensus 477 d~id~~I~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~ 532 (691)
+|-...+.+. .||.+.|+|.+.+ ..|+...+.+.++++.. +..++++.|+-|++
T Consensus 13 ~G~~~~l~~~--~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~ 68 (151)
T 3raz_A 13 DNTPQSLQSL--KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTS 68 (151)
T ss_dssp TCCEECGGGC--CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCH
T ss_pred CCCEecHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCh
Confidence 3433344555 8999999999833 33488888888887663 56899999999864
No 267
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=73.08 E-value=6.9 Score=31.81 Aligned_cols=45 Identities=7% Similarity=-0.045 Sum_probs=34.4
Q ss_pred cCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 488 KEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 488 ~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
+.||.+.+||.+++ .+|+.+.+.+.++++..+..+.++.|.-++.
T Consensus 16 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 61 (105)
T 1fb6_A 16 ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEA 61 (105)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC
T ss_pred cCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcch
Confidence 36888999998844 5569999999999887655678888876643
No 268
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=72.91 E-value=13 Score=35.45 Aligned_cols=98 Identities=13% Similarity=0.178 Sum_probs=61.9
Q ss_pred ceeecce-ecCcEEEEEEecCC-CChh--hhHHHH-HHHHhhccCCCCee-EEEEecccCCCCCChhhHHHHHHHhc---
Q 044391 325 TRVNIEV-LRRKHVLLLISSLD-LSDE--EILVLH-LYREHKAREEFDYA-IVWLPIVDRSIAWDEGYRQKFEQLQA--- 395 (691)
Q Consensus 325 ~kV~Is~-L~gK~VlL~fSal~-~~~~--e~~~L~-iY~~lk~~~~~~fE-IVwIpiVd~s~~W~D~d~~~F~~~~~--- 395 (691)
+.|.+++ ++||.|.|||=-.+ +|.| ++.-+. .|++++++ +.+ |+=||. | +-...+.|.+-..
T Consensus 32 ~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~---gv~~VigIS~-D-----~~~~~~~w~~~~~~~~ 102 (171)
T 2xhf_A 32 KSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEE---GYHTIACIAV-N-----DPFVMAAWGKTVDPEH 102 (171)
T ss_dssp CEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHT---TCCEEEEEES-S-----CHHHHHHHHHHHCTTC
T ss_pred cEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC---CCCEEEEEeC-C-----CHHHHHHHHHhcCCCC
Confidence 6899999 59999888876554 5444 667788 99999854 575 888986 4 2445677866443
Q ss_pred CCCeeeecCCCCCchHHHHHHHHhhCcC-----------CceEEEEeCCCCceeccc
Q 044391 396 MMPWYTVQHPTIIEPAVVKYAKEVWKFS-----------KKAILVPVDPQGRILNQN 441 (691)
Q Consensus 396 ~MPWyAVp~~d~i~~~~~r~ike~f~~~-----------~iP~LVvL~pqGkv~~~N 441 (691)
..|-+|=|. .+..+ .|++- ..-...|+| +|++....
T Consensus 103 ~f~lLSD~~-----~~~a~----ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~ 149 (171)
T 2xhf_A 103 KIRMLADMH-----GEFTR----ALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVS 149 (171)
T ss_dssp CSEEEECTT-----SHHHH----HHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred CeEEEEeCC-----chHHH----HhCCceeccccCCCcceEEEEEEEe-CCEEEEEE
Confidence 234443322 23333 34431 234556668 99987654
No 269
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=72.71 E-value=6.3 Score=35.95 Aligned_cols=38 Identities=5% Similarity=-0.053 Sum_probs=26.3
Q ss_pred ecCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEe
Q 044391 332 LRRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLP 374 (691)
Q Consensus 332 L~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIp 374 (691)
-.+|.++..|++.|||.|.- +.|. ++++. ++ ..++|++
T Consensus 20 ~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~----~~-v~~~~~~ 60 (175)
T 3gyk_A 20 PEGDVTVVEFFDYNCPYCRRAMAEVQGLVDAD----PN-VRLVYRE 60 (175)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHC----TT-EEEEEEE
T ss_pred CCCCEEEEEEECCCCccHHHHHHHHHHHHHhC----CC-EEEEEEe
Confidence 34889999999999998853 5566 66652 22 5555554
No 270
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=72.53 E-value=6.7 Score=34.56 Aligned_cols=52 Identities=6% Similarity=0.114 Sum_probs=40.4
Q ss_pred CCcEEEEEccCCh-hH--HHHHHHHHHHHHHHh--CCceeeEEecccChHHHHhhhh
Q 044391 489 EERYICLYGGGDI-EW--IRRFTTSAKAVARAA--QINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 489 egK~I~LYgG~D~-~W--ir~FT~~~~~Ik~~a--~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.||.+.|+|.+.+ .. |+...+.+.++.+.. +..++++.|+-|...+.+++.+
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~ 88 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAI 88 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHH
Confidence 7999999998833 44 778888888887764 4469999999997777776654
No 271
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=72.36 E-value=8.3 Score=33.00 Aligned_cols=43 Identities=9% Similarity=-0.124 Sum_probs=34.2
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhC-CceeeEEecccC
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQ-INLGMAYVGKNN 531 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~-~~~E~v~Vgkdn 531 (691)
.||.+.|+|.+.+ ..|+.+.+.+.++++... ..++++.|+-+.
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 77 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVN 77 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGG
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccC
Confidence 7899999998833 445889999999877743 679999998875
No 272
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=72.18 E-value=7.6 Score=34.39 Aligned_cols=51 Identities=8% Similarity=-0.014 Sum_probs=39.4
Q ss_pred hhhhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccChH
Q 044391 483 ILEWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNAK 533 (691)
Q Consensus 483 I~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~~ 533 (691)
+...++.||.++++|.+++ ..|+.+.+.+.++++..+..+.++.|.-+...
T Consensus 48 ~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~ 99 (148)
T 3p2a_A 48 LDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEP 99 (148)
T ss_dssp HHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH
T ss_pred HHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCH
Confidence 3344679999999999954 45699999999998886667888888776543
No 273
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=71.93 E-value=8.1 Score=31.80 Aligned_cols=48 Identities=10% Similarity=0.117 Sum_probs=36.7
Q ss_pred hhh-cCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 485 EWM-KEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 485 ~~i-~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
..+ +.+|.++++|++++ ..|+.+.+.+.++++..+..+.++.|.-+..
T Consensus 16 ~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~ 65 (111)
T 3gnj_A 16 QLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEE 65 (111)
T ss_dssp HHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTC
T ss_pred HHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcC
Confidence 345 58899999999944 4459999999999887665688888876643
No 274
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=71.00 E-value=4.8 Score=35.66 Aligned_cols=67 Identities=3% Similarity=-0.032 Sum_probs=42.7
Q ss_pred CcEEEEEEecCCCChhhhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCchHH
Q 044391 334 RKHVLLLISSLDLSDEEILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEPAV 412 (691)
Q Consensus 334 gK~VlL~fSal~~~~~e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~~~ 412 (691)
++.|+++|.+. |.+|. .+. +++++-+..++++.+++|-+ |+ |.
T Consensus 23 ~~pv~v~f~a~-~~~c~--~~~p~l~~~A~~~~gk~~f~~vd~--------d~----~~--------------------- 66 (133)
T 2djk_A 23 GIPLAYIFAET-AEERK--ELSDKLKPIAEAQRGVINFGTIDA--------KA----FG--------------------- 66 (133)
T ss_dssp TSCEEEEECSC-SSSHH--HHHHHHHHHHHSSTTTSEEEEECT--------TT----TG---------------------
T ss_pred CCCEEEEEecC-hhhHH--HHHHHHHHHHHHhCCeEEEEEEch--------HH----hH---------------------
Confidence 46688888888 56654 344 66665444355677888742 21 11
Q ss_pred HHHHHHhhCcCC--ceEEEEeCC-CCcee
Q 044391 413 VKYAKEVWKFSK--KAILVPVDP-QGRIL 438 (691)
Q Consensus 413 ~r~ike~f~~~~--iP~LVvL~p-qGkv~ 438 (691)
.+.+.|++++ +|+|++++. +|+..
T Consensus 67 --~~a~~~gi~~~~iPtl~i~~~~~g~~~ 93 (133)
T 2djk_A 67 --AHAGNLNLKTDKFPAFAIQEVAKNQKF 93 (133)
T ss_dssp --GGTTTTTCCSSSSSEEEEECTTTCCBC
T ss_pred --HHHHHcCCCcccCCEEEEEecCcCccc
Confidence 1234589998 999999984 67653
No 275
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=70.38 E-value=11 Score=31.96 Aligned_cols=45 Identities=11% Similarity=0.290 Sum_probs=33.1
Q ss_pred hhhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEeccc
Q 044391 484 LEWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 484 ~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkd 530 (691)
...++.|+.+.+||++++ .+|+.+.+.+.++++..+ ..++++.-+
T Consensus 23 ~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~--~~v~~~~~~ 68 (118)
T 1zma_A 23 QEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETK--AHIYFINSE 68 (118)
T ss_dssp HHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC--CCCEEEETT
T ss_pred HHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcC--CeEEEEECC
Confidence 344678999999999944 445999999999977655 456666444
No 276
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=70.26 E-value=6.4 Score=36.24 Aligned_cols=55 Identities=5% Similarity=0.029 Sum_probs=39.9
Q ss_pred hhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEecccC-------hHHHHhhhh
Q 044391 482 TILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNN-------AKERFRKIS 540 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn-------~~e~v~~~~ 540 (691)
.+.++ .||.+.|+|.+ .|| +.-.+.+.++.++. +..++++.|+.+. ..+.+++..
T Consensus 32 ~l~~~--~Gk~vlv~F~a--twC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~ 97 (180)
T 3kij_A 32 SLEKY--KGKVSLVVNVA--SDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFA 97 (180)
T ss_dssp EGGGG--TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHH
T ss_pred cHHHc--CCCEEEEEEEe--cCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHH
Confidence 34555 89999999999 677 77788888887664 4469999998653 345555543
No 277
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=69.36 E-value=8 Score=33.88 Aligned_cols=44 Identities=7% Similarity=-0.064 Sum_probs=34.3
Q ss_pred cCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 488 KEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 488 ~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
+.||.+++||.+++ .+|+++.+.+.++++..+..+.++.|.-+.
T Consensus 36 ~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~ 80 (136)
T 2l5l_A 36 EGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEK 80 (136)
T ss_dssp CCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTT
T ss_pred cCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCC
Confidence 36789999999944 556999999999988765568888887664
No 278
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=69.19 E-value=7.1 Score=33.41 Aligned_cols=44 Identities=11% Similarity=0.102 Sum_probs=35.3
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEec--cc
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVG--KN 530 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vg--kd 530 (691)
...||.++++|.+++ .+|+.+.+.+.++++..+..+.++.|. .+
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d 69 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEE 69 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSS
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCC
Confidence 458999999999854 556999999999988755678888887 55
No 279
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=69.16 E-value=8 Score=34.14 Aligned_cols=47 Identities=2% Similarity=-0.058 Sum_probs=36.6
Q ss_pred hhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 486 WMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 486 ~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.++.+|.++++|.+++ ..|++|.+.+.++++..+..+.++.|.-++.
T Consensus 20 ~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~ 67 (140)
T 3hz4_A 20 VEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATN 67 (140)
T ss_dssp TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTC
T ss_pred HHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcC
Confidence 3557999999999944 5569999999999887666688888876643
No 280
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=68.93 E-value=17 Score=30.61 Aligned_cols=32 Identities=28% Similarity=0.538 Sum_probs=21.7
Q ss_pred HHhhCcCCceEEEEeCCCCceecccHHHHHHHhCcccccCChhhHHHHH
Q 044391 417 KEVWKFSKKAILVPVDPQGRILNQNAFHMLWIWGNLAFPFSAEKEAALW 465 (691)
Q Consensus 417 ke~f~~~~iP~LVvL~pqGkv~~~NA~~mI~~wG~~AFPFT~~r~e~L~ 465 (691)
.+.++++ +|++++ .+|+.+. .+|++++++++-
T Consensus 41 ~~~~g~~-vPtl~~--~~G~~v~--------------g~~~~~~L~~~l 72 (87)
T 1ttz_A 41 ESAYGLR-VPVLRD--PMGRELD--------------WPFDAPRLRAWL 72 (87)
T ss_dssp HHHHTTT-CSEEEC--TTCCEEE--------------SCCCHHHHHHHH
T ss_pred HHHhCCC-cCeEEE--ECCEEEe--------------CCCCHHHHHHHH
Confidence 3446787 999988 6798872 357776665544
No 281
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=68.79 E-value=3.5 Score=34.29 Aligned_cols=45 Identities=7% Similarity=0.018 Sum_probs=34.2
Q ss_pred hhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 486 WMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 486 ~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.++.||.+++||.+++ ..|+.+.+.+.++++.. ..+.++.|.-+.
T Consensus 14 ~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~~~ 59 (105)
T 4euy_A 14 YIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENY-NYVEKIEILLQD 59 (105)
T ss_dssp STTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTC-TTEEEEEEEECC
T ss_pred HHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHc-CCceEEEEECCC
Confidence 3568999999999943 34499999999998774 357777777664
No 282
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=68.74 E-value=72 Score=31.19 Aligned_cols=30 Identities=13% Similarity=-0.187 Sum_probs=21.1
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAA 518 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a 518 (691)
.|+..++.|.+.+ ..|++..+.+.+++...
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~ 167 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEA 167 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHc
Confidence 5788777777722 33488899988887653
No 283
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=68.72 E-value=4.6 Score=34.04 Aligned_cols=46 Identities=4% Similarity=-0.116 Sum_probs=35.2
Q ss_pred hhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 485 EWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 485 ~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
+.+ .||.+.++|.+++ ..|+++.+.+.++++..+..+.++.|.-+.
T Consensus 13 ~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~ 59 (112)
T 2voc_A 13 AET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDE 59 (112)
T ss_dssp HHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred HHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCC
Confidence 345 8999999999943 445999999999987765568888887664
No 284
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=68.57 E-value=7.1 Score=34.81 Aligned_cols=45 Identities=4% Similarity=-0.040 Sum_probs=34.6
Q ss_pred hhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEeccc
Q 044391 482 TILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKN 530 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkd 530 (691)
.+.++ .||.+.|+|.+ .|| +...+.+.++.++. +..++++.|+.|
T Consensus 26 ~l~~~--~gk~vll~f~a--~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d 74 (170)
T 2p5q_A 26 DLSIF--KGKVLLIVNVA--SKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCN 74 (170)
T ss_dssp EGGGG--TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred cHHHh--CCCEEEEEEEe--ccCCccHHHHHHHHHHHHHhccCCEEEEEEECC
Confidence 44455 89999999998 677 77778888886653 346999999875
No 285
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=68.16 E-value=15 Score=32.05 Aligned_cols=51 Identities=12% Similarity=-0.016 Sum_probs=37.0
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeeEEecccCh-HHHHhhh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAA-QINLGMAYVGKNNA-KERFRKI 539 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~-~e~v~~~ 539 (691)
.||.+.|+|.+.+ ..|+...+.+.++++.. +..++++.|+-+.. .+.+++.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~ 80 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEF 80 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHH
Confidence 8899999998832 34488888888887664 44799999998864 4444443
No 286
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=68.13 E-value=11 Score=30.56 Aligned_cols=42 Identities=17% Similarity=0.124 Sum_probs=32.1
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.||.++++|++++ .+|+.+.+.+.++++..+ .+.++.|.-++
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~ 60 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQ 60 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccC
Confidence 7899999998844 556999999999877743 57777776664
No 287
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=67.99 E-value=5 Score=35.11 Aligned_cols=51 Identities=10% Similarity=0.092 Sum_probs=37.5
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKI 539 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~ 539 (691)
.||.+.|||.+.+ ..|+...+.+.++.+.. +..+.++.|+-+...+.+++.
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~ 81 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENM 81 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHH
Confidence 7899999998832 33488888888887663 456999999888665555543
No 288
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=67.90 E-value=7.9 Score=33.23 Aligned_cols=43 Identities=9% Similarity=-0.101 Sum_probs=32.4
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.||.+.|+|.+.+ ..|+.+.+.+.++++..+..+.++.|.-+.
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~ 71 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPR 71 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCC
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCC
Confidence 7899999998832 344888888888877644448888888664
No 289
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=67.71 E-value=10 Score=32.09 Aligned_cols=46 Identities=9% Similarity=-0.060 Sum_probs=35.5
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
++.+|.++++|.+++ .+|+.+.+.+.++++..+..+.++.|.-+..
T Consensus 18 ~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 64 (122)
T 3aps_A 18 LQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAY 64 (122)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTC
T ss_pred hcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCC
Confidence 457899999999954 5569999999999877555678887776643
No 290
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=67.61 E-value=5.7 Score=34.62 Aligned_cols=44 Identities=5% Similarity=-0.092 Sum_probs=35.0
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.||.+++||.+++ .+|+.+.+.+.++++..+..+.++.|.-++.
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 94 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKE 94 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCC
Confidence 5899999999943 4459999999999887666788888877654
No 291
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=67.49 E-value=7.7 Score=34.20 Aligned_cols=55 Identities=9% Similarity=-0.039 Sum_probs=38.8
Q ss_pred hhhhhhcCCcEEEEEccCChhHH---HHH-HHHHHHHHHHhC-CceeeEEeccc------ChHHHHhhhh
Q 044391 482 TILEWMKEERYICLYGGGDIEWI---RRF-TTSAKAVARAAQ-INLGMAYVGKN------NAKERFRKIS 540 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi---r~F-T~~~~~Ik~~a~-~~~E~v~Vgkd------n~~e~v~~~~ 540 (691)
.+.+. .||.+.|+|.+ .|| +.. .+.+.+++++.+ ..++++.|+.+ +..+.+++..
T Consensus 22 ~l~~~--~gk~vlv~f~a--~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~ 87 (158)
T 3eyt_A 22 TLADL--RGKVIVIEAFQ--MLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFL 87 (158)
T ss_dssp CTGGG--TTSEEEEEEEC--TTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHH
T ss_pred CHHHh--CCCEEEEEEEC--CcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHH
Confidence 34455 79999999988 565 776 788888877643 57999999863 3445555544
No 292
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=70.69 E-value=1.1 Score=38.84 Aligned_cols=48 Identities=15% Similarity=0.362 Sum_probs=36.6
Q ss_pred CCc-EEEEEccCChhHH---HHHHHHHHHHHHHh---CCceeeEEecccChHHHHhh
Q 044391 489 EER-YICLYGGGDIEWI---RRFTTSAKAVARAA---QINLGMAYVGKNNAKERFRK 538 (691)
Q Consensus 489 egK-~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a---~~~~E~v~Vgkdn~~e~v~~ 538 (691)
.|| .+.|||.+ .|| +.+.+.+.++++.. +..++++.|+-|...+.+++
T Consensus 24 ~gk~~vll~F~a--~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~ 78 (143)
T 2lus_A 24 KDKDIIGFYFSA--HWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQ 78 (143)
Confidence 688 99999999 777 77888887776653 35899999998865555444
No 293
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=67.29 E-value=13 Score=30.64 Aligned_cols=43 Identities=9% Similarity=0.023 Sum_probs=33.4
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.||.+.++|.+++ .+|+.+.+.+.++++..+ .+.++.|.-++.
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~ 68 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDEL 68 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEcccc
Confidence 5899999998854 566999999999977744 677777776643
No 294
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=67.23 E-value=4.2 Score=35.20 Aligned_cols=43 Identities=9% Similarity=0.037 Sum_probs=34.2
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHHHH--HHHHHhCCceeeEEecc
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTSAK--AVARAAQINLGMAYVGK 529 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~~~--~Ik~~a~~~~E~v~Vgk 529 (691)
.+.||.++|||++++ .+|+.+.+.+. ++++..+..+.++.|.-
T Consensus 26 ~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~ 71 (133)
T 3fk8_A 26 KRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDV 71 (133)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEEC
T ss_pred HhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeC
Confidence 458999999999954 55599999998 88776555788888876
No 295
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=67.17 E-value=8.7 Score=31.75 Aligned_cols=43 Identities=5% Similarity=-0.115 Sum_probs=33.5
Q ss_pred CcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 490 ERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 490 gK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
||.+.++|.+++ .+|+.+.+.+.++++..+..+.++.|.-+..
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~ 67 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAV 67 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTT
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCch
Confidence 899999998854 5569999999999877544678888876643
No 296
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=66.41 E-value=12 Score=30.49 Aligned_cols=43 Identities=5% Similarity=-0.006 Sum_probs=32.8
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.||.+++||++++ ..|+++.+.+.++++..+ .+.++.|.-+..
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~ 62 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS-NVIFLEVDVDDC 62 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHST-TSEEEEEETTTC
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHcc-CeEEEEEEhhhh
Confidence 7999999999944 445999999999987743 377777776643
No 297
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=66.35 E-value=9.5 Score=32.58 Aligned_cols=46 Identities=4% Similarity=-0.047 Sum_probs=34.4
Q ss_pred hhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 485 EWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 485 ~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
..++.||.+++||.+++ .+|+++.+.+.++++..+. +.++.|.-+.
T Consensus 25 ~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~ 71 (114)
T 2oe3_A 25 NLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDE 71 (114)
T ss_dssp HHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTT
T ss_pred HHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCC
Confidence 44668999999999944 4559999999998777433 7777776654
No 298
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=66.20 E-value=5.1 Score=36.98 Aligned_cols=48 Identities=10% Similarity=0.046 Sum_probs=36.1
Q ss_pred CCcEEEEEccCChhHH---HHHHHHHHHHHHHhCCceeeEEecccChHHHHhhhhh
Q 044391 489 EERYICLYGGGDIEWI---RRFTTSAKAVARAAQINLGMAYVGKNNAKERFRKISR 541 (691)
Q Consensus 489 egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a~~~~E~v~Vgkdn~~e~v~~~~~ 541 (691)
.||.+.|||.+ .|| +...+.+.++++. .++++.|+-++..+.+++.++
T Consensus 57 ~gk~vll~F~a--~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~ 107 (176)
T 3kh7_A 57 KGKPALVNVWG--TWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLN 107 (176)
T ss_dssp CSSCEEEEEEC--TTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHH
T ss_pred CCCEEEEEEEC--CcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHH
Confidence 69999999988 566 7777888887655 689999996666666665443
No 299
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=66.11 E-value=6.3 Score=36.05 Aligned_cols=56 Identities=9% Similarity=0.229 Sum_probs=39.1
Q ss_pred hhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCce------eeEEecccC-hHHHHhhhhh
Q 044391 482 TILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINL------GMAYVGKNN-AKERFRKISR 541 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~------E~v~Vgkdn-~~e~v~~~~~ 541 (691)
.+.++ .||.+.|||.+ .|| +...+.+.++++.. +..+ +++.|+-+. ..+.+++..+
T Consensus 53 ~l~~~--~gk~vlv~F~a--~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~ 119 (183)
T 3lwa_A 53 NLSDF--ENQVVILNAWG--QWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVT 119 (183)
T ss_dssp EGGGG--TTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHH
T ss_pred cHHHh--CCCEEEEEEEC--CcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHH
Confidence 34455 89999999998 565 77778888876653 2236 999999886 5666666543
No 300
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=66.05 E-value=7.9 Score=34.67 Aligned_cols=50 Identities=4% Similarity=-0.053 Sum_probs=36.4
Q ss_pred cCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccChHHHHhhhh
Q 044391 488 KEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 488 ~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
..||.+.|||.+.+ ..|+.+.+.+.+++++ .++++.|+-++..+.+++..
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~ 99 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWL 99 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHH
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHH
Confidence 47999999998833 3348888888888665 68889998766555555543
No 301
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=65.87 E-value=7.2 Score=34.17 Aligned_cols=45 Identities=13% Similarity=0.022 Sum_probs=35.6
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.+.||.++++|.+++ .+|+++.+.+.++++..+..+.++.|.-+.
T Consensus 37 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~ 82 (128)
T 2o8v_B 37 LKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQ 82 (128)
T ss_dssp TTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTT
T ss_pred HhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC
Confidence 458999999999954 556999999999988765568888887663
No 302
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=65.60 E-value=5.3 Score=36.30 Aligned_cols=64 Identities=3% Similarity=-0.108 Sum_probs=41.3
Q ss_pred HHhCcccccCChhhHHHHHhhhccchhhhcccCchhhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCce
Q 044391 447 WIWGNLAFPFSAEKEAALWKAESWRLELLIDDIDATILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINL 522 (691)
Q Consensus 447 ~~wG~~AFPFT~~r~e~L~~~e~w~lelLvd~id~~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~ 522 (691)
.-+|+.|++|+-.. + +|-...+.+. .||.+.|+|.+ .|| + ..+.+.++.++. +..+
T Consensus 6 ~~~~~~~~~f~l~d--------------~-~G~~~~l~~~--~Gk~vll~F~a--~wC~~C~-~~~~l~~l~~~~~~~~v 65 (171)
T 3cmi_A 6 HHHMSEFYKLAPVD--------------K-KGQPFPFDQL--KGKVVLIVNVA--SKCGFTP-QYKELEALYKRYKDEGF 65 (171)
T ss_dssp ----CGGGGCCCBB--------------T-TSCBCCGGGG--TTCEEEEEEEE--SSSCCHH-HHHHHHHHHHHHGGGTE
T ss_pred ccchhheeeeEEEc--------------C-CCCEecHHHc--CCCEEEEEEEe--cCCCcch-hHHHHHHHHHHhccCCe
Confidence 34788888884211 1 2333344555 79999999998 676 7 778888886653 3469
Q ss_pred eeEEeccc
Q 044391 523 GMAYVGKN 530 (691)
Q Consensus 523 E~v~Vgkd 530 (691)
+++.|+-|
T Consensus 66 ~vv~vs~d 73 (171)
T 3cmi_A 66 TIIGFPCN 73 (171)
T ss_dssp EEEEEEEC
T ss_pred EEEEEECc
Confidence 99999864
No 303
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=65.07 E-value=11 Score=32.75 Aligned_cols=49 Identities=8% Similarity=0.112 Sum_probs=34.5
Q ss_pred hhhhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhC---CceeeEEecccC
Q 044391 483 ILEWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQ---INLGMAYVGKNN 531 (691)
Q Consensus 483 I~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~---~~~E~v~Vgkdn 531 (691)
+...++.+|.+++||.+++ ..|+++.+.+.++++... ..+.++.|.-++
T Consensus 27 ~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~ 79 (140)
T 2dj1_A 27 FDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS 79 (140)
T ss_dssp HHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc
Confidence 3344678999999999944 445999999988876532 246777766553
No 304
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=64.56 E-value=5.8 Score=34.36 Aligned_cols=25 Identities=4% Similarity=-0.048 Sum_probs=19.4
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
+....+.+.+++++.|.+++ +|+.+
T Consensus 62 ~~~~~l~~~~g~~~vP~v~i---~g~~i 86 (114)
T 2hze_A 62 ELRDYFEQITGGKTVPRIFF---GKTSI 86 (114)
T ss_dssp HHHHHHHHHHSCCSSCEEEE---TTEEE
T ss_pred HHHHHHHHHhCCCCcCEEEE---CCEEE
Confidence 45667788899999998865 57765
No 305
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=64.01 E-value=9.2 Score=35.29 Aligned_cols=45 Identities=4% Similarity=-0.006 Sum_probs=34.5
Q ss_pred hhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEeccc
Q 044391 482 TILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKN 530 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkd 530 (691)
.+.++ .||.+.|+|.+ .|| +...+.+.+++++. +..++++.|+.|
T Consensus 43 ~l~~~--~Gk~vlv~F~a--twC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d 91 (181)
T 2p31_A 43 SLEKY--RGSVSLVVNVA--SECGFTDQHYRALQQLQRDLGPHHFNVLAFPCN 91 (181)
T ss_dssp EGGGG--TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred cHHHc--CCCEEEEEEec--cCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECc
Confidence 34455 79999999998 676 77778888886653 345999999876
No 306
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=63.94 E-value=22 Score=33.99 Aligned_cols=98 Identities=10% Similarity=0.063 Sum_probs=60.3
Q ss_pred ceeecce-ecCcEEEEEEecC-CCChhh---hHHHH-HHHHh-hccCCCCee-EEEEecccCCCCCChhhHHHHHHHhc-
Q 044391 325 TRVNIEV-LRRKHVLLLISSL-DLSDEE---ILVLH-LYREH-KAREEFDYA-IVWLPIVDRSIAWDEGYRQKFEQLQA- 395 (691)
Q Consensus 325 ~kV~Is~-L~gK~VlL~fSal-~~~~~e---~~~L~-iY~~l-k~~~~~~fE-IVwIpiVd~s~~W~D~d~~~F~~~~~- 395 (691)
+.|.+++ ++||.|.|||=-. |+|.|- +.-+. .|+++ +++ +.+ |+=||. | +-...+.|.+-..
T Consensus 33 ~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~---g~~~V~gvS~-D-----~~~~~~~~~~~~~~ 103 (182)
T 1xiy_A 33 TSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKEN---NFDDIYCITN-N-----DIYVLKSWFKSMDI 103 (182)
T ss_dssp EEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTS---CCSEEEEEES-S-----CHHHHHHHHHHTTC
T ss_pred eeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhC---CCcEEEEEeC-C-----CHHHHHHHHHHcCC
Confidence 6899988 6999888877554 455454 55688 89998 743 575 777885 4 2445567765433
Q ss_pred -CCCeeeecCCCCCchHHHHHHHHhhCcC------C-----ceEEEEeCCCCceeccc
Q 044391 396 -MMPWYTVQHPTIIEPAVVKYAKEVWKFS------K-----KAILVPVDPQGRILNQN 441 (691)
Q Consensus 396 -~MPWyAVp~~d~i~~~~~r~ike~f~~~------~-----iP~LVvL~pqGkv~~~N 441 (691)
..|-+|=+. +.+.+.|++- | .....|+| +|++....
T Consensus 104 ~~f~lLsD~~---------~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~~ 151 (182)
T 1xiy_A 104 KKIKYISDGN---------SSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKMF 151 (182)
T ss_dssp CSSEEEECTT---------SHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEEE
T ss_pred CCceEEEeCc---------hHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEEE
Confidence 233333211 2233445542 1 35566778 99998764
No 307
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=63.09 E-value=8.3 Score=35.89 Aligned_cols=45 Identities=7% Similarity=0.017 Sum_probs=34.8
Q ss_pred hhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEeccc
Q 044391 482 TILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKN 530 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkd 530 (691)
.+.+. .||.+.|+|.+ .|| +...+.+.++.+.. +..++++.|+-|
T Consensus 42 ~l~~~--~Gk~vll~F~a--twC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 90 (190)
T 2vup_A 42 NLVQH--KGSPLLIYNVA--SKCGYTKGGYETATTLYNKYKSQGFTVLAFPCN 90 (190)
T ss_dssp CGGGG--TTSCEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECC
T ss_pred EHHHc--CCCEEEEEEec--CCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcC
Confidence 34455 89999999998 777 77778888886653 346999999877
No 308
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.99 E-value=11 Score=32.27 Aligned_cols=44 Identities=11% Similarity=-0.040 Sum_probs=33.3
Q ss_pred cCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhC----CceeeEEecccC
Q 044391 488 KEERYICLYGGGDI-EWIRRFTTSAKAVARAAQ----INLGMAYVGKNN 531 (691)
Q Consensus 488 ~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~----~~~E~v~Vgkdn 531 (691)
+.+|.++++|.+++ .+|+.+.+.+.++++..+ ..+.++.|.-+.
T Consensus 23 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 71 (133)
T 1x5d_A 23 DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV 71 (133)
T ss_dssp TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT
T ss_pred cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC
Confidence 57899999999944 455999999888877643 567777776653
No 309
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=62.80 E-value=12 Score=31.55 Aligned_cols=42 Identities=7% Similarity=-0.049 Sum_probs=32.1
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.||.+.+||.+++ .+|+.+.+.+.++++.... +.++.|.-++
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~ 75 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDE 75 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCC
Confidence 6899999998854 5569999999999776433 7777776664
No 310
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=62.48 E-value=16 Score=31.58 Aligned_cols=43 Identities=9% Similarity=-0.022 Sum_probs=32.8
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.||.+.+||.+++ ..|+++.+.+.++++..+ .+.++.|.-+..
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~ 80 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDEL 80 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTS
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccC
Confidence 6999999999944 445999999999987744 677777766643
No 311
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=61.72 E-value=11 Score=34.37 Aligned_cols=55 Identities=5% Similarity=0.033 Sum_probs=38.2
Q ss_pred hhhhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhC-CceeeEEecccCh-HHHHhhh
Q 044391 483 ILEWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQ-INLGMAYVGKNNA-KERFRKI 539 (691)
Q Consensus 483 I~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~-~~~E~v~Vgkdn~-~e~v~~~ 539 (691)
+.++ .||.+.|+|.+.+ ..|+...+.+.++.+..+ ..++++.|+-|.. .+.+++.
T Consensus 55 l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~ 112 (186)
T 1jfu_A 55 LSDF--RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTF 112 (186)
T ss_dssp GGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHH
T ss_pred HHHc--CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHH
Confidence 3444 7999999998832 344888888888876643 6899999998753 2344443
No 312
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=61.46 E-value=13 Score=31.76 Aligned_cols=47 Identities=4% Similarity=-0.034 Sum_probs=34.7
Q ss_pred hhhc--CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 485 EWMK--EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 485 ~~i~--egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
..++ .||.++++|.+++ ..|+++.+.+.++++..+. +.++.|.-+..
T Consensus 24 ~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~ 73 (116)
T 3qfa_C 24 EALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDC 73 (116)
T ss_dssp HHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTT
T ss_pred HHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCC
Confidence 3455 8999999999944 4459999999999876433 77777776643
No 313
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=60.90 E-value=5.9 Score=44.09 Aligned_cols=64 Identities=5% Similarity=-0.124 Sum_probs=44.9
Q ss_pred HHHHHHhcCCCeeeecCCCCCchHHHHHHHHhhCcCCceEEEEeCCCCcee----cccHHHHHHHhCcccccC
Q 044391 388 QKFEQLQAMMPWYTVQHPTIIEPAVVKYAKEVWKFSKKAILVPVDPQGRIL----NQNAFHMLWIWGNLAFPF 456 (691)
Q Consensus 388 ~~F~~~~~~MPWyAVp~~d~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~----~~NA~~mI~~wG~~AFPF 456 (691)
..+..-+..+||.+|++-.. ....|.++|++++.|+||+++++|++. ..+.+..+..| ...+|.
T Consensus 173 ~~~~ldl~~~~~v~v~~v~~----~~~~l~~kfgV~~~Pslvl~~~nGk~~~~~v~~~~r~~~~~~-l~~l~~ 240 (519)
T 3t58_A 173 REVTLDLSQYHAVAVRRVLN----TESDLVNKFGVTDFPSCYLLLRNGSVSRVPVLVESRSFYTSY-LRGLPG 240 (519)
T ss_dssp HHHHHHTTTCTTEEEEEEET----TCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSCSHHHHHHH-HTTSTT
T ss_pred HHHHHHhhccCCeeEEEecC----chHHHHHHcCCCCCCeEEEEeCCCceeecccccccHHHHHHH-HHHccC
Confidence 45666678899999988542 234566779999999999999999864 34455555544 444444
No 314
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=60.47 E-value=7.2 Score=33.47 Aligned_cols=49 Identities=4% Similarity=-0.036 Sum_probs=35.5
Q ss_pred hhhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCC-ceeeEEecccCh
Q 044391 484 LEWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQI-NLGMAYVGKNNA 532 (691)
Q Consensus 484 ~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~-~~E~v~Vgkdn~ 532 (691)
...++.||.+++||.+++ .+|+.+.+.+.++++.... .+.++.|.-++.
T Consensus 27 ~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~ 77 (121)
T 2j23_A 27 KQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ 77 (121)
T ss_dssp HHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTC
T ss_pred HHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCC
Confidence 344678999999999844 4559999999888765322 377888877643
No 315
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=60.22 E-value=7 Score=36.83 Aligned_cols=47 Identities=26% Similarity=0.418 Sum_probs=37.0
Q ss_pred CCcEEEEEccCChhHH---HHHHHHHHHHHHHhCCceeeEEecccChHHHHhh
Q 044391 489 EERYICLYGGGDIEWI---RRFTTSAKAVARAAQINLGMAYVGKNNAKERFRK 538 (691)
Q Consensus 489 egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a~~~~E~v~Vgkdn~~e~v~~ 538 (691)
.||.+.++|++ .|| +.+.|.+.++++.. ..++++.|.-|...+.+++
T Consensus 53 ~~k~vvv~F~A--~WC~pC~~~~P~l~~l~~~~-~~v~~~~v~~d~~~~~~~~ 102 (167)
T 1z6n_A 53 ERRYRLLVAGE--MWCPDCQINLAALDFAQRLQ-PNIELAIISKGRAEDDLRQ 102 (167)
T ss_dssp CSCEEEEEECC--TTCHHHHHHHHHHHHHHHHC-TTEEEEEECHHHHHHHTTT
T ss_pred CCCEEEEEEEC--CCChhHHHHHHHHHHHHHHC-CCcEEEEEECCCCHHHHHH
Confidence 68999999999 676 99999999998763 3688888887755554443
No 316
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=60.12 E-value=12 Score=40.94 Aligned_cols=67 Identities=7% Similarity=-0.091 Sum_probs=42.3
Q ss_pred ecCcEEEEEEecCCCChhhh--HHHHHHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCc
Q 044391 332 LRRKHVLLLISSLDLSDEEI--LVLHLYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIE 409 (691)
Q Consensus 332 L~gK~VlL~fSal~~~~~e~--~~L~iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~ 409 (691)
+.++.....|++.||++|.. ++|+ ++... ..+.++.-|-+ |.
T Consensus 115 ~~~~~~i~~f~a~~C~~C~~~~~~l~---~~a~~-~~~v~~~~vd~--------~~------------------------ 158 (521)
T 1hyu_A 115 IDGDFEFETYYSLSCHNCPDVVQALN---LMAVL-NPRIKHTAIDG--------GT------------------------ 158 (521)
T ss_dssp CCSCEEEEEEECTTCSSHHHHHHHHH---HHHHH-CTTEEEEEEET--------TT------------------------
T ss_pred cCCCcceEEEECCCCcCcHHHHHHHH---HHHhH-cCceEEEEEec--------hh------------------------
Confidence 44778899999999999864 4455 22211 12455554422 21
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceecc
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILNQ 440 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~ 440 (691)
..-+.+.++++.+|++++ +|+.+..
T Consensus 159 ---~~~~~~~~~i~svPt~~i---~g~~~~~ 183 (521)
T 1hyu_A 159 ---FQNEITERNVMGVPAVFV---NGKEFGQ 183 (521)
T ss_dssp ---CHHHHHHTTCCSSSEEEE---TTEEEEE
T ss_pred ---hHHHHHHhCCCccCEEEE---CCEEEec
Confidence 112456689999999988 8888743
No 317
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=60.05 E-value=9.5 Score=33.74 Aligned_cols=45 Identities=9% Similarity=0.079 Sum_probs=33.2
Q ss_pred hhhhhcCCcEEEEEccCChhHH----HHHHHHHHHHHHHhC-----CceeeEEecccC
Q 044391 483 ILEWMKEERYICLYGGGDIEWI----RRFTTSAKAVARAAQ-----INLGMAYVGKNN 531 (691)
Q Consensus 483 I~~~i~egK~I~LYgG~D~~Wi----r~FT~~~~~Ik~~a~-----~~~E~v~Vgkdn 531 (691)
+.++ .||.+.|||++ .|| +...+.+.++.+..+ ..++++.|+-|.
T Consensus 18 l~~~--~gk~vll~f~~--~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~ 71 (164)
T 2ggt_A 18 DKDY--LGQWLLIYFGF--THCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDP 71 (164)
T ss_dssp GGGG--TTCEEEEEEEC--TTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCT
T ss_pred HHHc--CCCEEEEEEEe--CCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCC
Confidence 4455 79999999998 676 566667777755432 389999999875
No 318
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=59.72 E-value=14 Score=31.54 Aligned_cols=43 Identities=9% Similarity=-0.008 Sum_probs=33.3
Q ss_pred cCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 488 KEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 488 ~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
+.||.+.++|.+++ .+|+.+.+.+.++++.. ..+.++.|.-+.
T Consensus 21 ~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~ 64 (118)
T 2f51_A 21 EAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDK 64 (118)
T ss_dssp HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCC
Confidence 47899999999954 55699999999998774 567777776653
No 319
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=59.20 E-value=12 Score=32.70 Aligned_cols=50 Identities=4% Similarity=-0.043 Sum_probs=35.8
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccChHHHHhhhh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.||.+.|+|.+.+ .+|+.+.+.+.++++. ..++++.|+-+...+.+++..
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~ 91 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFL 91 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHH
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHH
Confidence 6899999998833 4458888888887554 458889988776556665543
No 320
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=58.79 E-value=11 Score=34.40 Aligned_cols=49 Identities=8% Similarity=-0.021 Sum_probs=37.0
Q ss_pred hhhhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 483 ILEWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 483 I~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
....++.||.+.+||.+++ ..|+.|.+.+.++++.....+.++.|.-+.
T Consensus 57 f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~ 106 (155)
T 2ppt_A 57 LARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQA 106 (155)
T ss_dssp HHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred HHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCc
Confidence 3344578999999999943 345999999999988755567888887664
No 321
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=58.56 E-value=14 Score=30.71 Aligned_cols=42 Identities=7% Similarity=-0.080 Sum_probs=31.8
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.||.+.++|.+++ .+|+++.+.+.++++..+ .+.++.|..++
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~ 69 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDE 69 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEccc
Confidence 4899999998844 556999999999977743 56677776654
No 322
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=57.58 E-value=18 Score=29.83 Aligned_cols=43 Identities=7% Similarity=-0.147 Sum_probs=32.6
Q ss_pred cCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 488 KEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 488 ~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
+.||.+.++|.+++ .+|+.+.+.+.++++.. ..+.++.|.-+.
T Consensus 19 ~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~ 62 (107)
T 1gh2_A 19 AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQ 62 (107)
T ss_dssp TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT
T ss_pred CCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECcc
Confidence 47899999999954 55699999999998774 346666666553
No 323
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=57.44 E-value=7.9 Score=38.86 Aligned_cols=21 Identities=14% Similarity=0.229 Sum_probs=16.9
Q ss_pred HHHHhhCcC--CceEEEEeCCCCc
Q 044391 415 YAKEVWKFS--KKAILVPVDPQGR 436 (691)
Q Consensus 415 ~ike~f~~~--~iP~LVvL~pqGk 436 (691)
-|.+.|+++ +.|+|+++ ++|+
T Consensus 72 ~l~~~~~V~~~~~PTl~~f-~~G~ 94 (240)
T 2qc7_A 72 ELSEKYKLDKESYPVFYLF-RDGD 94 (240)
T ss_dssp HHHHHTTCCGGGCSEEEEE-ETTC
T ss_pred HHHHHcCCCCCCCCEEEEE-eCCC
Confidence 356779999 99999999 4565
No 324
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=56.23 E-value=8 Score=33.09 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=33.6
Q ss_pred cCCcEEEEEccCChhHH---HHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 488 KEERYICLYGGGDIEWI---RRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 488 ~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
+.+|.++++|.+ .|| +.+.+.+.++++..+..+.++.|.-+..
T Consensus 33 ~~~~~~lv~f~a--~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 78 (130)
T 2dml_A 33 QSDGLWLVEFYA--PWCGHCQRLTPEWKKAATALKDVVKVGAVNADKH 78 (130)
T ss_dssp TCSSCEEEEEEC--TTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTC
T ss_pred cCCCeEEEEEEC--CCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCC
Confidence 578999999999 565 9999999999877554577777766643
No 325
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=56.08 E-value=7 Score=36.40 Aligned_cols=46 Identities=7% Similarity=0.021 Sum_probs=35.5
Q ss_pred hhhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEeccc
Q 044391 481 ATILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKN 530 (691)
Q Consensus 481 ~~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkd 530 (691)
..+.+. .||.+.|+|.+ .|| +...+.+.++.++. +..++++.|+.|
T Consensus 39 ~~l~~~--~Gk~vlv~F~a--twC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d 88 (187)
T 3dwv_A 39 YNLVQH--KGSPLLIYNVA--SKCGYTKGGYETATTLYNKYKSQGFTVLAFPSN 88 (187)
T ss_dssp CCGGGG--TTSCEEEEEEC--CBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBC
T ss_pred eeHHHh--CCCEEEEEEec--CCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECc
Confidence 344555 89999999998 777 77778888886663 446999999876
No 326
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=55.72 E-value=11 Score=34.08 Aligned_cols=44 Identities=11% Similarity=0.049 Sum_probs=33.5
Q ss_pred cCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 488 KEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 488 ~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
+.||.++++|.+++ ..|+.+.+.+.++++..+..+.++.|.-|.
T Consensus 21 ~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~ 65 (149)
T 3gix_A 21 TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQ 65 (149)
T ss_dssp CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTT
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCc
Confidence 46999999999933 334999999999987755557777776653
No 327
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=55.14 E-value=18 Score=30.17 Aligned_cols=26 Identities=4% Similarity=0.036 Sum_probs=18.5
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+....+.+.+++++.|++++ +|+.+.
T Consensus 55 ~~~~~l~~~~g~~~vP~i~~---~g~~i~ 80 (105)
T 1kte_A 55 EIQDYLQQLTGARTVPRVFI---GKECIG 80 (105)
T ss_dssp HHHHHHHHHHSCCCSCEEEE---TTEEEE
T ss_pred HHHHHHHHHhCCCCcCeEEE---CCEEEe
Confidence 34456677789999999865 576653
No 328
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=54.97 E-value=14 Score=30.58 Aligned_cols=43 Identities=14% Similarity=0.215 Sum_probs=30.9
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeeEEecccC
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAA-QINLGMAYVGKNN 531 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a-~~~~E~v~Vgkdn 531 (691)
.||.++++|.+++ ..|+.+.+.+.++++.. ...+.++.|.-+.
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 64 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE 64 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc
Confidence 3899999999932 33499999999987762 2347777776654
No 329
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=54.92 E-value=19 Score=31.30 Aligned_cols=53 Identities=9% Similarity=-0.069 Sum_probs=36.8
Q ss_pred hhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEeccc-ChHHHHhh
Q 044391 482 TILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKN-NAKERFRK 538 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkd-n~~e~v~~ 538 (691)
.+.+. .||.+.|+|.+ .|| +...+.+.++++.. +..+.++.|+-+ ++.+.+++
T Consensus 22 ~l~~~--~gk~~lv~f~~--~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~ 79 (153)
T 2l5o_A 22 SNADL--QGKVTLINFWF--PSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQ 79 (153)
T ss_dssp EHHHH--TTCEEEEEEEC--TTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHH
T ss_pred cHHHh--CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHH
Confidence 34444 79999999988 565 88888888887663 346899998853 23344444
No 330
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=54.90 E-value=17 Score=33.42 Aligned_cols=45 Identities=7% Similarity=-0.110 Sum_probs=34.2
Q ss_pred hhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEeccc
Q 044391 482 TILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKN 530 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkd 530 (691)
.+.+. .||.+.|+|.+ .|| +...+.+.++.++. +..++++.|+.|
T Consensus 41 ~l~~~--~gk~vll~F~a--twC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 89 (183)
T 2obi_A 41 NLDKY--RGFVCIVTNVA--SQCGKTEVNYTQLVDLHARYAECGLRILAFPCN 89 (183)
T ss_dssp EGGGG--TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred eHHHc--CCCEEEEEEeC--CCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECC
Confidence 34455 79999999998 676 77777888886653 346999999875
No 331
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=53.91 E-value=17 Score=32.24 Aligned_cols=46 Identities=4% Similarity=-0.066 Sum_probs=34.7
Q ss_pred hhhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEeccc
Q 044391 481 ATILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKN 530 (691)
Q Consensus 481 ~~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkd 530 (691)
..+.++ .||.+.|+|.+ .|| +.-.+.+.++.++. +..++++.|+.|
T Consensus 24 ~~l~~~--~gk~vlv~f~a--~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d 73 (169)
T 2v1m_A 24 VSLEKY--RGHVCLIVNVA--CKCGATDKNYRQLQEMHTRLVGKGLRILAFPCN 73 (169)
T ss_dssp EEGGGG--TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred ccHHHc--CCCEEEEEEee--ccCCchHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 344555 89999999998 677 77777787776653 346999999876
No 332
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=53.87 E-value=10 Score=34.02 Aligned_cols=42 Identities=14% Similarity=0.082 Sum_probs=33.3
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEeccc
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkd 530 (691)
.||.++++|++++ ..|+.+.+.+.++++..+..+.++.|.-+
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d 64 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT 64 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccc
Confidence 5899999999943 33599999999998876556888887665
No 333
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=53.00 E-value=16 Score=32.58 Aligned_cols=45 Identities=9% Similarity=0.091 Sum_probs=33.6
Q ss_pred hhhhhcCCcEEEEEccCChhHH----HHHHHHHHHHHHHh-----CCceeeEEecccC
Q 044391 483 ILEWMKEERYICLYGGGDIEWI----RRFTTSAKAVARAA-----QINLGMAYVGKNN 531 (691)
Q Consensus 483 I~~~i~egK~I~LYgG~D~~Wi----r~FT~~~~~Ik~~a-----~~~~E~v~Vgkdn 531 (691)
+.++ .||.+.|||.+ .|| +...+.+.++.+.. +..++++.|+-|.
T Consensus 21 l~~~--~gk~vll~F~~--~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~ 74 (171)
T 2rli_A 21 KADF--RGQWVLMYFGF--THCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDP 74 (171)
T ss_dssp TTTT--TTSEEEEEEEC--TTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCS
T ss_pred HHHh--CCCEEEEEEEc--CCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECC
Confidence 3445 79999999998 665 66677777776553 2589999999873
No 334
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=57.44 E-value=3 Score=37.14 Aligned_cols=48 Identities=8% Similarity=0.162 Sum_probs=34.8
Q ss_pred CCcEEEEEccCChhHH---HHHHHHHHH-HHHHh--CCceeeEEecccChHHHHhh
Q 044391 489 EERYICLYGGGDIEWI---RRFTTSAKA-VARAA--QINLGMAYVGKNNAKERFRK 538 (691)
Q Consensus 489 egK~I~LYgG~D~~Wi---r~FT~~~~~-Ik~~a--~~~~E~v~Vgkdn~~e~v~~ 538 (691)
.||.+.|+|.+ .|| +...+.+.+ +.+.. +..++++.|+.|...+.+++
T Consensus 32 ~gk~vll~f~a--~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~ 85 (159)
T 2ls5_A 32 RGKVVMLQFTA--SWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLA 85 (159)
Confidence 78999999998 677 777777776 64442 46789999988765554444
No 335
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=51.83 E-value=17 Score=32.69 Aligned_cols=54 Identities=9% Similarity=0.102 Sum_probs=37.1
Q ss_pred hhhhhhcCCcE-EEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhhh
Q 044391 482 TILEWMKEERY-ICLYGG-GDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 482 ~I~~~i~egK~-I~LYgG-~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.+.++ .||. +.|+|. + .|| +...+.+.+++++. +..++++.|+.|++ +.+++..
T Consensus 22 ~l~~~--~gk~~vvl~F~~a--~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~-~~~~~~~ 81 (161)
T 3drn_A 22 SLSDY--IGKHNIVLYFYPK--DDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDI-NSHKRFK 81 (161)
T ss_dssp EGGGT--TTTSEEEEEECSC--TTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCH-HHHHHHH
T ss_pred EHHHh--cCCCCEEEEEEcC--CCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCH-HHHHHHH
Confidence 34455 7887 888887 7 566 77777777776653 45699999999864 4554433
No 336
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=51.78 E-value=24 Score=30.70 Aligned_cols=47 Identities=13% Similarity=0.037 Sum_probs=35.1
Q ss_pred hhhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 484 LEWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 484 ~~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.+.++.||.++++|.+++ ..|+.+.+.+.++++.. ..+.++.|.-+.
T Consensus 31 ~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~d~ 78 (125)
T 1r26_A 31 RNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEF-PTVKFAKVDADN 78 (125)
T ss_dssp HHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHC-TTSEEEEEETTT
T ss_pred HHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHC-CCCEEEEEECCC
Confidence 334578999999999944 44599999999998774 357777776664
No 337
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=50.92 E-value=9.9 Score=34.35 Aligned_cols=43 Identities=21% Similarity=0.310 Sum_probs=31.9
Q ss_pred cCCcEEEEEc-cCCh-hHHHHHHHHH---HHHHHHhCCceeeEEeccc
Q 044391 488 KEERYICLYG-GGDI-EWIRRFTTSA---KAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 488 ~egK~I~LYg-G~D~-~Wir~FT~~~---~~Ik~~a~~~~E~v~Vgkd 530 (691)
..||.++||| |+++ .+|+.+.+.+ .++++..+..+.++.|.-+
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~ 92 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFP 92 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECC
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCc
Confidence 3799999999 6844 5559999888 7776654567777777655
No 338
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=50.78 E-value=11 Score=38.14 Aligned_cols=67 Identities=10% Similarity=0.040 Sum_probs=40.9
Q ss_pred cCcEEEEEEe--cCCCChhhhHHHH-HHHHhhccC---CCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCC
Q 044391 333 RRKHVLLLIS--SLDLSDEEILVLH-LYREHKARE---EFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPT 406 (691)
Q Consensus 333 ~gK~VlL~fS--al~~~~~e~~~L~-iY~~lk~~~---~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d 406 (691)
.+|.|++.|. +.||+ |. +|+++-+.. +.+ |++.-+ |- |+ |++
T Consensus 32 ~~~~vlV~Fy~~ApWCg------l~P~~e~lA~~~~~~~~~--v~~akV-D~-----d~------------------~g~ 79 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE------KHEAFTAFSKSAHKATKD--LLIATV-GV-----KD------------------YGE 79 (248)
T ss_dssp TSSEEEEEEEESSCCSH------HHHHHHHHHHHHHHHCSS--EEEEEE-EE-----CS------------------STT
T ss_pred cCCCEEEEEECCCCCCc------cHHHHHHHHHHHhccCCC--eEEEEE-EC-----Cc------------------ccc
Confidence 3689999999 99996 56 666654321 123 444433 20 11 000
Q ss_pred CCchHHHHHHHHhhCcC--CceEEEEeCCCCce
Q 044391 407 IIEPAVVKYAKEVWKFS--KKAILVPVDPQGRI 437 (691)
Q Consensus 407 ~i~~~~~r~ike~f~~~--~iP~LVvL~pqGkv 437 (691)
+.-+.|.+.|+++ +.|+|+++- |+.
T Consensus 80 ----~~n~~la~~~~V~~~~~PTl~~F~--G~~ 106 (248)
T 2c0g_A 80 ----LENKALGDRYKVDDKNFPSIFLFK--GNA 106 (248)
T ss_dssp ----CTTHHHHHHTTCCTTSCCEEEEES--SSS
T ss_pred ----cccHHHHHHhCCCcCCCCeEEEEe--CCc
Confidence 0012456779999 999999996 873
No 339
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=50.68 E-value=22 Score=30.39 Aligned_cols=42 Identities=2% Similarity=-0.012 Sum_probs=30.7
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.+|.+.++|.+++ ..|+.+.+.+.++++.. ..+..+.|.-|.
T Consensus 19 ~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~d~ 61 (105)
T 3zzx_A 19 GNKLVVIDFYATWCGPCKMIAPKLEELSQSM-SDVVFLKVDVDE 61 (105)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHC-TTEEEEEEETTT
T ss_pred CCCEEEEEEECCCCCCccCCCcchhhhhhcc-CCeEEEEEeccc
Confidence 5799999999943 33499999999998773 345566665553
No 340
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=49.90 E-value=12 Score=31.33 Aligned_cols=43 Identities=5% Similarity=-0.029 Sum_probs=32.4
Q ss_pred cCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCC-----ceeeEEeccc
Q 044391 488 KEERYICLYGGGDI-EWIRRFTTSAKAVARAAQI-----NLGMAYVGKN 530 (691)
Q Consensus 488 ~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~-----~~E~v~Vgkd 530 (691)
+.+|.++++|.+++ ..|+.|.+.+.++++.... .+.++.|.-+
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~ 71 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDAT 71 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETT
T ss_pred cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECc
Confidence 47899999999943 3459999999999877443 5667766554
No 341
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=49.55 E-value=22 Score=33.08 Aligned_cols=40 Identities=13% Similarity=0.084 Sum_probs=29.3
Q ss_pred cCcEEEEEEecCCCChhhh--HHHHHHHHhhccCCCCeeEEEEec
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLHLYREHKAREEFDYAIVWLPI 375 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~iY~~lk~~~~~~fEIVwIpi 375 (691)
.+|.+++.|++.|||.|.- +.|. ++.++.+++.+++.+|+
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~---~l~~~~~~~v~~~~~~~ 65 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVE---DWAKTAPQDVVLKQVPI 65 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHH---HHHHTCCTTEEEEEEEC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHH---HHHHHCCCCeEEEEEec
Confidence 5899999999999998853 3444 44333344788999997
No 342
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=49.43 E-value=22 Score=29.87 Aligned_cols=41 Identities=5% Similarity=-0.055 Sum_probs=30.9
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.||.+.++|.+++ .+|+++.+.+.++++.. .+.++.|.-+.
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~ 73 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDK 73 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTT
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCc
Confidence 7899999999844 55699999998887664 56666666554
No 343
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=48.91 E-value=16 Score=33.43 Aligned_cols=45 Identities=9% Similarity=0.037 Sum_probs=33.6
Q ss_pred hhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHhCCceeeEEeccc
Q 044391 482 TILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a~~~~E~v~Vgkd 530 (691)
.+.+. .||.+.|+|.+ .|| +...+.+.++.++.+..++++.|+.+
T Consensus 27 ~l~~~--~gk~vlv~F~a--~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d 74 (188)
T 2cvb_A 27 RLSQF--HEPLLAVVFMC--NHCPYVKGSIGELVALAERYRGKVAFVGINAN 74 (188)
T ss_dssp EGGGC--CSSEEEEEEEC--SSCHHHHTTHHHHHHHHHHTTTTEEEEEEECC
T ss_pred eHHHh--CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHhhcCeEEEEEEcC
Confidence 34444 78999999998 576 67777888887664333999999875
No 344
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=48.72 E-value=20 Score=30.05 Aligned_cols=43 Identities=5% Similarity=0.075 Sum_probs=31.3
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEeccc
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkd 530 (691)
+..+|.+.++|.+++ .+|+.+.+.+.++++..+ .+.++.|.-+
T Consensus 16 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~ 59 (110)
T 2l6c_A 16 FEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSE 59 (110)
T ss_dssp HTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGG
T ss_pred HHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCc
Confidence 557888999999844 455999999999876632 5666666554
No 345
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=47.99 E-value=19 Score=31.92 Aligned_cols=41 Identities=12% Similarity=0.123 Sum_probs=32.9
Q ss_pred CCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEecccC
Q 044391 489 EERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNN 531 (691)
Q Consensus 489 egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn 531 (691)
.||.+.|||.+ .|| +...+.+.++++.. +..+.++.|+.+.
T Consensus 40 ~gk~vll~F~~--~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 84 (158)
T 3hdc_A 40 RGKIVLVNFWA--SWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK 84 (158)
T ss_dssp TTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS
T ss_pred CCCEEEEEEEC--CcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH
Confidence 79999999988 565 78888888887764 3689999998874
No 346
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=47.98 E-value=14 Score=35.53 Aligned_cols=46 Identities=13% Similarity=0.017 Sum_probs=36.1
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
++.+|.++|+|.+++ ..|+.+.+.+.++++..+..+.++.|.-+..
T Consensus 27 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~ 73 (222)
T 3dxb_A 27 LKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQN 73 (222)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC
T ss_pred HhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCC
Confidence 568999999999943 4459999999999887665678888777644
No 347
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=47.68 E-value=39 Score=27.48 Aligned_cols=47 Identities=6% Similarity=-0.005 Sum_probs=33.3
Q ss_pred hhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhC---CceeeEEecccCh
Q 044391 485 EWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQ---INLGMAYVGKNNA 532 (691)
Q Consensus 485 ~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~---~~~E~v~Vgkdn~ 532 (691)
+.++ +|.+.++|.+++ ..|+.+.+.+.++++... ..+.++.|.-+..
T Consensus 17 ~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 67 (111)
T 3uvt_A 17 DTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAE 67 (111)
T ss_dssp HHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTC
T ss_pred HHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecccc
Confidence 3344 788999998844 456999999999976522 3677777776643
No 348
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=47.29 E-value=31 Score=29.85 Aligned_cols=43 Identities=5% Similarity=-0.052 Sum_probs=32.7
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.||.++++|.+++ .+|+.+.+.+.++++.. ..+.++.|.-+..
T Consensus 45 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~v~~~~~ 88 (139)
T 3d22_A 45 DGKIVLANFSARWCGPSRQIAPYYIELSENY-PSLMFLVIDVDEL 88 (139)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTS
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCccc
Confidence 6899999999944 45599999999997774 3577777766643
No 349
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=46.67 E-value=88 Score=28.66 Aligned_cols=94 Identities=22% Similarity=0.243 Sum_probs=49.1
Q ss_pred cCcEEEEEEecCCCChhhhHHHHHHHHhhccCCCCeeEEEE--ec--ccCCC------CCChhhHHH-HHHHh--cCCCe
Q 044391 333 RRKHVLLLISSLDLSDEEILVLHLYREHKAREEFDYAIVWL--PI--VDRSI------AWDEGYRQK-FEQLQ--AMMPW 399 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~~~L~iY~~lk~~~~~~fEIVwI--pi--Vd~s~------~W~D~d~~~-F~~~~--~~MPW 399 (691)
.+|.++..|++.+||.|.-. +..+++- .+..|+|+ |+ ..+.. -|--.++.+ |++++ ...|
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~----~~~l~~l--~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~- 85 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRL----EHEFEKM--TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFP- 85 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHH----HHHHTTC--CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCC-
T ss_pred CCCEEEEEEECCCChhHHHH----HHHHhhc--CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCC-
Confidence 47999999999999887431 2222221 24666665 55 22100 011112322 33322 1222
Q ss_pred eeecCCCC-CchHHHHHHHHhhCcCCceEEEEeCCCCce
Q 044391 400 YTVQHPTI-IEPAVVKYAKEVWKFSKKAILVPVDPQGRI 437 (691)
Q Consensus 400 yAVp~~d~-i~~~~~r~ike~f~~~~iP~LVvL~pqGkv 437 (691)
...++- -....-..+.+.+++++.|++++ .+|+.
T Consensus 86 --~~~~~~~~~v~~~~~la~~~gI~gtPt~vi--~nG~~ 120 (147)
T 3gv1_A 86 --VGGSICDNPVAETTSLGEQFGFNGTPTLVF--PNGRT 120 (147)
T ss_dssp --TTCCCCSCSHHHHHHHHHHTTCCSSCEEEC--TTSCE
T ss_pred --CccHHHHHHHHHHHHHHHHhCCCccCEEEE--ECCEE
Confidence 011110 01223446678999999999998 47764
No 350
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=46.14 E-value=16 Score=32.52 Aligned_cols=47 Identities=9% Similarity=0.123 Sum_probs=33.8
Q ss_pred chhhhhhhcCCcEEEEEccCChhHH----HHHHHHHHHHHHHhC----CceeeEEeccc
Q 044391 480 DATILEWMKEERYICLYGGGDIEWI----RRFTTSAKAVARAAQ----INLGMAYVGKN 530 (691)
Q Consensus 480 d~~I~~~i~egK~I~LYgG~D~~Wi----r~FT~~~~~Ik~~a~----~~~E~v~Vgkd 530 (691)
...+.++ .||.+.|||.+ .|| +...+.+.++.+..+ ..++++.|+-|
T Consensus 27 ~~~l~~~--~gk~vll~f~~--~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d 81 (172)
T 2k6v_A 27 PVRLSQF--QDKVVLLFFGF--TRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVD 81 (172)
T ss_dssp EEEGGGS--TTSEEEEEEEC--TTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESC
T ss_pred CCcHHHh--CCCEEEEEEEC--CCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEEC
Confidence 3344555 79999999998 665 666667777765533 37999999976
No 351
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=46.06 E-value=16 Score=34.99 Aligned_cols=45 Identities=11% Similarity=0.041 Sum_probs=33.9
Q ss_pred hhhhhhcCCcE-EEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEeccc
Q 044391 482 TILEWMKEERY-ICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKN 530 (691)
Q Consensus 482 ~I~~~i~egK~-I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkd 530 (691)
.+.++ .||. +.|+|.+ .|| +...+.+.+++++. +..++++.|+.|
T Consensus 52 ~l~~~--~gk~~vll~F~a--~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d 101 (218)
T 3u5r_E 52 TLAEF--KDSPALLVAFIS--NRCPFVVLIREALAKFAGDYAGQGLAVVAINSN 101 (218)
T ss_dssp CGGGG--TTCSEEEEEECC--SSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECS
T ss_pred eHHHh--CCCCeEEEEEEC--CCCccHHHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence 34455 7885 9999988 676 77778888887764 445999999986
No 352
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=45.63 E-value=43 Score=29.07 Aligned_cols=43 Identities=12% Similarity=-0.093 Sum_probs=32.2
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.++ ++++|.+++ ..|+.+.+.+.++++..+..+.++.|.-+..
T Consensus 50 ~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~ 93 (140)
T 1v98_A 50 APL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEH 93 (140)
T ss_dssp CCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTC
T ss_pred CCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCC
Confidence 445 888888843 5569999999999887555688888876643
No 353
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=44.82 E-value=40 Score=28.68 Aligned_cols=42 Identities=5% Similarity=0.011 Sum_probs=31.7
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhC--CceeeEEeccc
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQ--INLGMAYVGKN 530 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~--~~~E~v~Vgkd 530 (691)
.+|.++++|.+++ .+|+++.+.+.++++... ..+.++.|.-+
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~ 68 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDAT 68 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTT
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCC
Confidence 5899999999944 445999999999977643 45776666554
No 354
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=44.63 E-value=17 Score=31.92 Aligned_cols=66 Identities=11% Similarity=0.094 Sum_probs=39.5
Q ss_pred EEEEecCCCChhhhHHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCchHHHHHH
Q 044391 338 LLLISSLDLSDEEILVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEPAVVKYA 416 (691)
Q Consensus 338 lL~fSal~~~~~e~~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~~~~r~i 416 (691)
..+|++.|||.|.-. |. +.+++. ..+.++..|.+ |.+.+ ..+..+.|
T Consensus 27 Vvvf~~~~Cp~C~~a-lk~~L~~~~---~~~i~~~~vdi--------d~~~~--------------------~~~~~~~l 74 (118)
T 3c1r_A 27 IFVASKTYCPYCHAA-LNTLFEKLK---VPRSKVLVLQL--------NDMKE--------------------GADIQAAL 74 (118)
T ss_dssp EEEEECSSCHHHHHH-HHHHHTTSC---CCGGGEEEEEG--------GGSTT--------------------HHHHHHHH
T ss_pred EEEEEcCCCcCHHHH-HHHHHHHcC---CCCCCeEEEEC--------ccCCC--------------------hHHHHHHH
Confidence 456899999988644 34 444432 12355556665 22110 12455677
Q ss_pred HHhhCcCCceEEEEeCCCCcee
Q 044391 417 KEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 417 ke~f~~~~iP~LVvL~pqGkv~ 438 (691)
++.++.+..|.+.+ +|+.+
T Consensus 75 ~~~~g~~tvP~vfi---~g~~i 93 (118)
T 3c1r_A 75 YEINGQRTVPNIYI---NGKHI 93 (118)
T ss_dssp HHHHSCCSSCEEEE---TTEEE
T ss_pred HHHhCCCCcCEEEE---CCEEE
Confidence 77889999998755 66665
No 355
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=44.11 E-value=35 Score=29.29 Aligned_cols=42 Identities=10% Similarity=-0.014 Sum_probs=32.0
Q ss_pred CCcEEEEEccCC-------h-hHHHHHHHHHHHHHHHhCCceeeEEeccc
Q 044391 489 EERYICLYGGGD-------I-EWIRRFTTSAKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 489 egK~I~LYgG~D-------~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkd 530 (691)
.||.++++|.++ + ..|+.+.+.+.++++..+..+.++.|.-+
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~ 72 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVG 72 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECC
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECC
Confidence 389999999994 3 34499999999998775456777777663
No 356
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=44.05 E-value=42 Score=27.70 Aligned_cols=41 Identities=7% Similarity=-0.061 Sum_probs=30.7
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEeccc
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkd 530 (691)
.||.+++||.+++ .+|+.+.+.+.++++..+ .+.++.|.-+
T Consensus 23 ~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~ 64 (111)
T 2pu9_C 23 GDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCN 64 (111)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECS
T ss_pred CCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecC
Confidence 5899999999954 556999999999977633 3666666554
No 357
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=43.82 E-value=20 Score=32.16 Aligned_cols=47 Identities=4% Similarity=-0.076 Sum_probs=36.4
Q ss_pred hhhhhhhcCCcEEEEEccCChhH----HHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 481 ATILEWMKEERYICLYGGGDIEW----IRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 481 ~~I~~~i~egK~I~LYgG~D~~W----ir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
..+.++ .||.+.|+|.+ .| |+...+.+.++.++. ..++++.|+.|++
T Consensus 37 ~~l~~~--~gk~~vl~F~~--~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~ 87 (167)
T 2jsy_A 37 KSLADM--KGKVTIISVIP--SIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLP 87 (167)
T ss_dssp EEHHHH--TTSCEEEEECS--CSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSG
T ss_pred eeHHHh--CCCeEEEEEec--CCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCH
Confidence 344555 78999999987 55 488888888887765 6899999999864
No 358
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=43.53 E-value=35 Score=31.47 Aligned_cols=47 Identities=15% Similarity=0.171 Sum_probs=32.1
Q ss_pred hhhhhhcCCcEEEEEcc-CChhHH---HHHHHHHHHHHHH-hCCceeeEEecccCh
Q 044391 482 TILEWMKEERYICLYGG-GDIEWI---RRFTTSAKAVARA-AQINLGMAYVGKNNA 532 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG-~D~~Wi---r~FT~~~~~Ik~~-a~~~~E~v~Vgkdn~ 532 (691)
.+.++ .||++.|||. + .|| +.=.+.+.++.++ .+..++++.|+.|++
T Consensus 45 ~l~d~--~Gk~vvl~f~~~--~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~ 96 (179)
T 3ixr_A 45 TLSDY--TNQWLVLYFYPK--DNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSV 96 (179)
T ss_dssp CGGGG--TTSEEEEEECSC--TTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCH
T ss_pred eHHHH--CCCCEEEEEEcC--CCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 34455 7999988887 6 565 4444555555444 356799999999865
No 359
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=49.44 E-value=5 Score=32.45 Aligned_cols=42 Identities=12% Similarity=0.174 Sum_probs=31.0
Q ss_pred cCCcEEEEEccCChhHH---HHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 488 KEERYICLYGGGDIEWI---RRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 488 ~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
+.||.+.++|.+ .|| +++.+.+.++++..+..+.++.|.-+.
T Consensus 17 ~~~~~~~v~f~~--~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~ 61 (106)
T 2yj7_A 17 KSDKPVLVDFWA--PWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDE 61 (106)
Confidence 578999999998 666 888888888876644456666666553
No 360
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=43.08 E-value=32 Score=31.95 Aligned_cols=48 Identities=2% Similarity=-0.065 Sum_probs=36.4
Q ss_pred CCcEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhh
Q 044391 489 EERYICLYGG-GDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKI 539 (691)
Q Consensus 489 egK~I~LYgG-~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~ 539 (691)
.||.+.|||. + .|| +...+.+.++.+.. +..++++.|+.|.+ +.+++-
T Consensus 44 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~-~~~~~~ 96 (195)
T 2bmx_A 44 PGKWRVVFFWPK--DFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSE-FAHFQW 96 (195)
T ss_dssp TTCEEEEEECSC--TTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHH
T ss_pred CCCcEEEEEEcC--CCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHH
Confidence 6899999998 8 787 88888888876653 44799999999863 444443
No 361
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=42.64 E-value=21 Score=31.15 Aligned_cols=47 Identities=6% Similarity=0.000 Sum_probs=33.1
Q ss_pred cEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecc--cChHHHHhhh
Q 044391 491 RYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGK--NNAKERFRKI 539 (691)
Q Consensus 491 K~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgk--dn~~e~v~~~ 539 (691)
|.+.|+|.+.+ ..|+...+.+.++++.. .++++.|+- ++..+.+++.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~ 80 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEY 80 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHH
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHH
Confidence 88888887732 44588888888887776 788888888 3334444443
No 362
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=42.31 E-value=36 Score=29.60 Aligned_cols=42 Identities=12% Similarity=0.028 Sum_probs=30.8
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHH---HHHHHHhCCceeeEEecccC
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSA---KAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~---~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.||.++|+|.+++ .+|+++.+.+ .++++..+ .+.++.|.-+.
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~ 75 (134)
T 2fwh_A 30 KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTA 75 (134)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTT
T ss_pred cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCC
Confidence 4899999999944 4558888877 78876643 47777776653
No 363
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.84 E-value=65 Score=28.51 Aligned_cols=25 Identities=4% Similarity=-0.045 Sum_probs=19.0
Q ss_pred HHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 412 VVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 412 ~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
..+.+.+.+++...|++++ +|+.+.
T Consensus 68 ~~~~l~~~~g~~~vP~l~i---~G~~ig 92 (130)
T 2cq9_A 68 FQDALYKMTGERTVPRIFV---NGTFIG 92 (130)
T ss_dssp HHHHHHHHHSSCCSSEEEE---TTEEEE
T ss_pred HHHHHHHHhCCCCcCEEEE---CCEEEc
Confidence 4556777889999999865 677663
No 364
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=41.56 E-value=38 Score=31.89 Aligned_cols=48 Identities=6% Similarity=-0.066 Sum_probs=36.4
Q ss_pred hhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 485 EWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 485 ~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
..+..||.++++|.+++ ..|+.+.+.+.++++..+..+.++.|.-+..
T Consensus 109 ~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~ 157 (210)
T 3apq_A 109 AAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDD 157 (210)
T ss_dssp HHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTC
T ss_pred HHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCcc
Confidence 33568999999999944 4459999999999887555677777776643
No 365
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=41.37 E-value=12 Score=33.48 Aligned_cols=55 Identities=5% Similarity=-0.013 Sum_probs=36.5
Q ss_pred hhhhhhcCCcEEEEEccCChhHH----HHHHHHHHHHHHHh---CCceeeEEecccC---hHHHHhhhh
Q 044391 482 TILEWMKEERYICLYGGGDIEWI----RRFTTSAKAVARAA---QINLGMAYVGKNN---AKERFRKIS 540 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi----r~FT~~~~~Ik~~a---~~~~E~v~Vgkdn---~~e~v~~~~ 540 (691)
.+.++ .||.+.|+|.+ .|| +...+.+.++.+.. +..++++.|+-|. ..+.+++..
T Consensus 27 ~l~~~--~gk~vll~f~~--~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~ 91 (174)
T 1xzo_A 27 SLESL--KGEVWLADFIF--TNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFA 91 (174)
T ss_dssp ETGGG--TTCCEEEEEEC--SCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHH
T ss_pred ehhhc--CCCEEEEEEEc--CCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHH
Confidence 34455 79999999988 676 56666676665442 3369999999873 334454433
No 366
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=41.23 E-value=36 Score=31.32 Aligned_cols=45 Identities=7% Similarity=-0.135 Sum_probs=33.7
Q ss_pred hhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEeccc
Q 044391 482 TILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKN 530 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkd 530 (691)
.+.+. .||.+.|+|.+ .|| +.-.+.+.++.++. +..++++.|+.|
T Consensus 43 ~l~~~--~Gk~vlv~F~a--twC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d 91 (185)
T 2gs3_A 43 NLDKY--RGFVCIVTNVA--SQGGKTEVNYTQLVDLHARYAECGLRILAFPCN 91 (185)
T ss_dssp EGGGG--TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred eHHHc--CCCEEEEEEec--CCCCchHHHHHHHHHHHHHhhcCCeEEEEEECc
Confidence 34455 79999999988 677 67777787776653 346999999865
No 367
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=41.10 E-value=43 Score=29.87 Aligned_cols=45 Identities=2% Similarity=-0.005 Sum_probs=33.2
Q ss_pred hcC--CcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 487 MKE--ERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 487 i~e--gK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
++. ||.++++|.+++ .+|+.+.+.+.++++.. ..+.++.|.-+..
T Consensus 27 ~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~~ 74 (153)
T 2wz9_A 27 LRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEGV 74 (153)
T ss_dssp HHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTS
T ss_pred HHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCCC
Confidence 444 999999999944 45599999999997773 3566777766543
No 368
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=41.05 E-value=1.5e+02 Score=24.42 Aligned_cols=50 Identities=6% Similarity=-0.027 Sum_probs=32.5
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceecccHHHHHHHhCcccc---cCChhhHHH
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILNQNAFHMLWIWGNLAF---PFSAEKEAA 463 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~NA~~mI~~wG~~AF---PFT~~r~e~ 463 (691)
....+.|++.....+.|++++.+.... +...-....|+++| ||+.+++.+
T Consensus 71 ~~~~~~l~~~~~~~~~pii~ls~~~~~----~~~~~~~~~g~~~~l~kP~~~~~l~~ 123 (140)
T 1k68_A 71 REVLAEIKSDPTLKRIPVVVLSTSINE----DDIFHSYDLHVNCYITKSANLSQLFQ 123 (140)
T ss_dssp HHHHHHHHHSTTGGGSCEEEEESCCCH----HHHHHHHHTTCSEEEECCSSHHHHHH
T ss_pred HHHHHHHHcCcccccccEEEEecCCcH----HHHHHHHHhchhheecCCCCHHHHHH
Confidence 456777777666688999988876543 22223345788887 776655443
No 369
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=41.02 E-value=20 Score=31.53 Aligned_cols=42 Identities=7% Similarity=-0.124 Sum_probs=31.8
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHH-hCCceeeEEeccc
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARA-AQINLGMAYVGKN 530 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~-a~~~~E~v~Vgkd 530 (691)
.||.+.|+|.+.+ ..|+.+.+.+.++++. .+..++++.|+-+
T Consensus 37 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~ 80 (164)
T 2h30_A 37 KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASP 80 (164)
T ss_dssp TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcC
Confidence 8999999999833 3348888888888665 2456899999865
No 370
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=40.90 E-value=22 Score=33.19 Aligned_cols=45 Identities=7% Similarity=-0.026 Sum_probs=31.2
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHHH---HHHHHHhCCceeeEEecccC
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTSA---KAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~~---~~Ik~~a~~~~E~v~Vgkdn 531 (691)
-++||.|+||+++++ .||+.|.... .+|++..+..|-.+.+-.++
T Consensus 39 k~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~ 87 (153)
T 2dlx_A 39 QMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDS 87 (153)
T ss_dssp HHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSS
T ss_pred HHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCC
Confidence 448999999999976 7888887643 45554444467666665553
No 371
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=40.60 E-value=27 Score=30.82 Aligned_cols=53 Identities=4% Similarity=-0.100 Sum_probs=36.5
Q ss_pred hhhhhhcCCc-EEEEEc-cCChhHH---HHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhh
Q 044391 482 TILEWMKEER-YICLYG-GGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKI 539 (691)
Q Consensus 482 ~I~~~i~egK-~I~LYg-G~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~ 539 (691)
.+.+. .|| .+.|+| ++ .|| +...+.+.++.+.. +..++++.|+.|++ +.+++.
T Consensus 29 ~l~~~--~gk~~vvl~F~~a--~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~-~~~~~~ 87 (160)
T 1xvw_A 29 TLRGY--RGAKNVLLVFFPL--AFTGICQGELDQLRDHLPEFENDDSAALAISVGPP-PTHKIW 87 (160)
T ss_dssp EGGGG--TTTCEEEEEECSC--TTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCH-HHHHHH
T ss_pred eHHHh--cCCCCEEEEEECC--CCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCH-HHHHHH
Confidence 34455 787 888888 47 666 77777777776653 35799999999864 444443
No 372
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=39.71 E-value=28 Score=31.98 Aligned_cols=26 Identities=4% Similarity=-0.046 Sum_probs=19.3
Q ss_pred HHHHHHHHhhCcCCceEEEEeCCCCceec
Q 044391 411 AVVKYAKEVWKFSKKAILVPVDPQGRILN 439 (691)
Q Consensus 411 ~~~r~ike~f~~~~iP~LVvL~pqGkv~~ 439 (691)
+..+.|.+.+++.++|.+++ +|+.+.
T Consensus 89 ~~~~~L~~~~g~~tvP~ifi---~G~~ig 114 (146)
T 2ht9_A 89 QFQDALYKMTGERTVPRIFV---NGTFIG 114 (146)
T ss_dssp HHHHHHHHHHSCCCSCEEEE---TTEEEE
T ss_pred HHHHHHHHHhCCCCcCeEEE---CCEEEe
Confidence 34556778899999999865 677663
No 373
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=39.59 E-value=1.3e+02 Score=25.39 Aligned_cols=79 Identities=5% Similarity=-0.014 Sum_probs=44.1
Q ss_pred CeeEEEEecccCCCCCChhhHHHHHHHhc-CCCeeeec---CCC-CCchHHHHHHHHhhCcCCceEEEEeCCCCceeccc
Q 044391 367 DYAIVWLPIVDRSIAWDEGYRQKFEQLQA-MMPWYTVQ---HPT-IIEPAVVKYAKEVWKFSKKAILVPVDPQGRILNQN 441 (691)
Q Consensus 367 ~fEIVwIpiVd~s~~W~D~d~~~F~~~~~-~MPWyAVp---~~d-~i~~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~N 441 (691)
.|+++..+ ..++.++.+.. .-|=+.+= .|+ .-.....+.|++. .+.|++++-+......-..
T Consensus 29 g~~v~~~~----------~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~---~~~~ii~ls~~~~~~~~~~ 95 (140)
T 3h5i_A 29 GYTVEIAL----------TGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQI---SELPVVFLTAHTEPAVVEK 95 (140)
T ss_dssp TCEEEEES----------SHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHH---CCCCEEEEESSSSCCCCGG
T ss_pred CCEEEEec----------ChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhC---CCCCEEEEECCCCHHHHHH
Confidence 48888653 13345555655 45555442 221 1123456666653 6889888887655444444
Q ss_pred HHHHHHHhCcccc---cCChhhHH
Q 044391 442 AFHMLWIWGNLAF---PFSAEKEA 462 (691)
Q Consensus 442 A~~mI~~wG~~AF---PFT~~r~e 462 (691)
|+ ..|+++| ||+.+++.
T Consensus 96 ~~----~~g~~~~l~KP~~~~~l~ 115 (140)
T 3h5i_A 96 IR----SVTAYGYVMKSATEQVLI 115 (140)
T ss_dssp GG----GSCEEEEEETTCCHHHHH
T ss_pred HH----hCCCcEEEeCCCCHHHHH
Confidence 44 3588887 77655443
No 374
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=39.42 E-value=28 Score=31.81 Aligned_cols=45 Identities=4% Similarity=-0.019 Sum_probs=32.8
Q ss_pred hhhhhhcCCc-EEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEeccc
Q 044391 482 TILEWMKEER-YICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKN 530 (691)
Q Consensus 482 ~I~~~i~egK-~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkd 530 (691)
.+.++ .|| .+.|+|.+ .|| +...+.+.++.++. +..++++.|+.|
T Consensus 39 ~l~~~--~gk~~vlv~F~a--~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d 88 (196)
T 2ywi_A 39 RLEDV--KSDAATVIMFIC--NHCPFVKHVQHELVRLANDYMPKGVSFVAINSN 88 (196)
T ss_dssp EHHHH--CCSSEEEEEECC--SSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECS
T ss_pred eHHHh--CCCCeEEEEEeC--CCCccHHHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence 44455 787 48999988 566 77778888886653 346999999885
No 375
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.15 E-value=20 Score=31.26 Aligned_cols=41 Identities=10% Similarity=0.060 Sum_probs=31.7
Q ss_pred CCcEEEEEccCChhHH---HHHHHHHHHHHHHhC-CceeeEEecccC
Q 044391 489 EERYICLYGGGDIEWI---RRFTTSAKAVARAAQ-INLGMAYVGKNN 531 (691)
Q Consensus 489 egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a~-~~~E~v~Vgkdn 531 (691)
.++.+++||.+ .|| +.+.+.+.++++..+ ..+.++.|.-+.
T Consensus 25 ~~~~vlv~f~a--~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~ 69 (137)
T 2dj0_A 25 KRVTWIVEFFA--NWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR 69 (137)
T ss_dssp TTSCEEEEECC--TTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT
T ss_pred CCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc
Confidence 45689999999 676 999999999987754 367888776653
No 376
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=39.01 E-value=9.1 Score=38.63 Aligned_cols=12 Identities=33% Similarity=1.068 Sum_probs=9.2
Q ss_pred ceeecCCCCccc
Q 044391 669 ERLACAECGRTM 680 (691)
Q Consensus 669 ~~i~CpeC~R~M 680 (691)
+.+.||+|||.+
T Consensus 221 ~Iv~Cp~CgRIL 232 (256)
T 3na7_A 221 DMITCPYCGRIL 232 (256)
T ss_dssp SCEECTTTCCEE
T ss_pred CEEECCCCCeeE
Confidence 458888888865
No 377
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=38.89 E-value=56 Score=27.46 Aligned_cols=41 Identities=7% Similarity=-0.056 Sum_probs=30.4
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEeccc
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkd 530 (691)
.||.+.++|.+++ .+|+++.+.+.++++... .+.++.|.-+
T Consensus 36 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~ 77 (124)
T 1faa_A 36 GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCN 77 (124)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecC
Confidence 7899999999844 556999999999977633 3566666554
No 378
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=38.83 E-value=44 Score=28.48 Aligned_cols=49 Identities=4% Similarity=-0.112 Sum_probs=34.2
Q ss_pred hhhh-cCCcEEEEEccCCh-hHHHHHHHHHHHHHHH-----hCCceeeEEecccCh
Q 044391 484 LEWM-KEERYICLYGGGDI-EWIRRFTTSAKAVARA-----AQINLGMAYVGKNNA 532 (691)
Q Consensus 484 ~~~i-~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~-----a~~~~E~v~Vgkdn~ 532 (691)
...+ +.+|.++++|.+.+ ..|+.+.+.+.++++. .+..+.++.|.-+..
T Consensus 26 ~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~ 81 (127)
T 3h79_A 26 DSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKY 81 (127)
T ss_dssp HHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTC
T ss_pred HHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcccc
Confidence 3334 36899999999943 3349999999998764 134577777766643
No 379
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=38.25 E-value=15 Score=29.03 Aligned_cols=63 Identities=6% Similarity=-0.016 Sum_probs=38.0
Q ss_pred EEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEecccCCCCCChhhHHHHHHHhcCCCeeeecCCCCCchHHHH
Q 044391 338 LLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPIVDRSIAWDEGYRQKFEQLQAMMPWYTVQHPTIIEPAVVK 414 (691)
Q Consensus 338 lL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpiVd~s~~W~D~d~~~F~~~~~~MPWyAVp~~d~i~~~~~r 414 (691)
.++|++.|||.|.- +.|. +-.+. .+++++.|-+ +.+. . ..+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~-----~~i~~~~vdi--------~~~~------------------~-----~~~ 46 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNER-----DDFQYQYVDI--------RAEG------------------I-----TKE 46 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHH-----SSCEEEEECH--------HHHT------------------C-----CSH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcC-----CCceEEEEec--------ccCh------------------H-----HHH
Confidence 46789999999854 4455 44332 2477777754 2211 0 012
Q ss_pred HHHHhhC--cCCceEEEEeCCCCceec
Q 044391 415 YAKEVWK--FSKKAILVPVDPQGRILN 439 (691)
Q Consensus 415 ~ike~f~--~~~iP~LVvL~pqGkv~~ 439 (691)
.+.+.++ +.+.|++++ +|+.+.
T Consensus 47 ~l~~~~~~~~~~vP~i~~---~g~~i~ 70 (85)
T 1ego_A 47 DLQQKAGKPVETVPQIFV---DQQHIG 70 (85)
T ss_dssp HHHHHTCCCSCCSCEEEE---TTEEEE
T ss_pred HHHHHhCCCCceeCeEEE---CCEEEE
Confidence 3556677 899999854 577653
No 380
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=38.24 E-value=45 Score=26.40 Aligned_cols=33 Identities=3% Similarity=-0.058 Sum_probs=20.9
Q ss_pred EEEEecCCCChhhhHHHHHHHHhhccCCCCeeEEEEec
Q 044391 338 LLLISSLDLSDEEILVLHLYREHKAREEFDYAIVWLPI 375 (691)
Q Consensus 338 lL~fSal~~~~~e~~~L~iY~~lk~~~~~~fEIVwIpi 375 (691)
..+|+..|||.|.-... +-++ . +-+|+++.|.+
T Consensus 6 v~ly~~~~Cp~C~~~~~-~L~~---~-~i~~~~~~vd~ 38 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQ-WFEE---N-NIAFDETIIDD 38 (89)
T ss_dssp EEEEECTTCHHHHHHHH-HHHH---T-TCCCEEEECCS
T ss_pred EEEEEcCCChhHHHHHH-HHHH---c-CCCceEEEeec
Confidence 56789999988854221 2222 2 56699888754
No 381
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=44.19 E-value=6.8 Score=33.64 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=31.2
Q ss_pred hcCCcEEEEEccCChhHH---HHHHHHH---HHHHHHhCCceeeEEeccc
Q 044391 487 MKEERYICLYGGGDIEWI---RRFTTSA---KAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 487 i~egK~I~LYgG~D~~Wi---r~FT~~~---~~Ik~~a~~~~E~v~Vgkd 530 (691)
...||.++|||.+ .|| +.+.+.+ .++++..+..+.++.|.-+
T Consensus 16 ~~~~k~vlv~f~a--~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 63 (130)
T 2lst_A 16 QAHGRMVMVYFHS--EHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVD 63 (130)
Confidence 4589999999999 566 8888887 7776665555666666554
No 382
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=37.40 E-value=1.5e+02 Score=24.10 Aligned_cols=49 Identities=16% Similarity=0.066 Sum_probs=28.4
Q ss_pred hHHHHHHHHhhCcCCceEEEEeCCCCceecccHHHHHHHhCcccc---cCChhhHH
Q 044391 410 PAVVKYAKEVWKFSKKAILVPVDPQGRILNQNAFHMLWIWGNLAF---PFSAEKEA 462 (691)
Q Consensus 410 ~~~~r~ike~f~~~~iP~LVvL~pqGkv~~~NA~~mI~~wG~~AF---PFT~~r~e 462 (691)
.+..+.|++......+|++++-+..... .+.. ....|+.+| ||+.+...
T Consensus 61 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~---~~~~-~~~~g~~~~l~KP~~~~~l~ 112 (124)
T 1mb3_A 61 LEVTKWLKEDDDLAHIPVVAVTAFAMKG---DEER-IREGGCEAYISKPISVVHFL 112 (124)
T ss_dssp HHHHHHHHHSTTTTTSCEEEEC---------CHHH-HHHHTCSEEECSSCCHHHHH
T ss_pred HHHHHHHHcCccccCCcEEEEECCCCHH---HHHH-HHhCCCCEEEeCCCCHHHHH
Confidence 4567777776567789988876643322 2233 345788887 77765543
No 383
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=37.11 E-value=22 Score=33.91 Aligned_cols=44 Identities=18% Similarity=0.195 Sum_probs=31.0
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHH---HHHHHHHhCCceeeEEeccc
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTS---AKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~---~~~Ik~~a~~~~E~v~Vgkd 530 (691)
.++||.|+|.|++++ .||+.+.+. ..++++..+..|-.+-|-.+
T Consensus 36 ~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~d 83 (173)
T 3ira_A 36 RKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDRE 83 (173)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETT
T ss_pred HHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCc
Confidence 568999999999977 888888773 24555544445666666554
No 384
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=36.65 E-value=9.6 Score=35.04 Aligned_cols=45 Identities=2% Similarity=-0.039 Sum_probs=31.4
Q ss_pred hcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 487 MKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
...||.++|+|.+++ .+|+.+.+.+.++++..+..+.++.|.-+.
T Consensus 43 ~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~ 88 (164)
T 1sen_A 43 AASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLED 88 (164)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEG
T ss_pred HhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecC
Confidence 458999999999944 555999998887655433345566665553
No 385
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=36.57 E-value=12 Score=30.88 Aligned_cols=46 Identities=11% Similarity=0.081 Sum_probs=32.1
Q ss_pred hhhcCCcEEEEEccCCh-hHHHHHHHHHHHHHHHhC---CceeeEEeccc
Q 044391 485 EWMKEERYICLYGGGDI-EWIRRFTTSAKAVARAAQ---INLGMAYVGKN 530 (691)
Q Consensus 485 ~~i~egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~---~~~E~v~Vgkd 530 (691)
..++.||.++++|.+++ .+|+++.+.+.++++... ..+.++.|..+
T Consensus 19 ~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~ 68 (120)
T 1mek_A 19 EALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDAT 68 (120)
T ss_dssp HHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETT
T ss_pred HHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCC
Confidence 34568999999999943 334899999988876532 35666666554
No 386
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=36.18 E-value=28 Score=31.85 Aligned_cols=46 Identities=11% Similarity=-0.099 Sum_probs=33.2
Q ss_pred hhhhhhcCCcEEEEEccCChhHH----HHHHHHHHHHHHHh---CCceeeEEecccC
Q 044391 482 TILEWMKEERYICLYGGGDIEWI----RRFTTSAKAVARAA---QINLGMAYVGKNN 531 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi----r~FT~~~~~Ik~~a---~~~~E~v~Vgkdn 531 (691)
.+.++ .||.+.|||.. .|| +.-.+.+.++.++. +..++++.|+-|.
T Consensus 22 ~l~~~--~Gk~vll~F~~--t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~ 74 (170)
T 3me7_A 22 QLKNL--KGKPIILSPIY--THCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDP 74 (170)
T ss_dssp EGGGG--TTSCEEEEEEC--TTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCT
T ss_pred chHHh--CCCEEEEEEEC--CCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCC
Confidence 34455 69999999988 666 55556666665553 4679999999873
No 387
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=35.74 E-value=47 Score=30.45 Aligned_cols=40 Identities=15% Similarity=0.038 Sum_probs=29.6
Q ss_pred ecCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEec
Q 044391 332 LRRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPI 375 (691)
Q Consensus 332 L~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpi 375 (691)
+.+|.++.+|++.+||.|.. +.|. +.++. +.+++++++|+
T Consensus 23 ~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~----~~~v~~~~~p~ 65 (193)
T 2rem_A 23 LAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQ----AKDVRFTLVPA 65 (193)
T ss_dssp CTTCEEEEEEECTTCHHHHHHHHHHHHHHHTS----CTTEEEEEEEC
T ss_pred CCCCeEEEEEECCCChhHhhhhHHHHHHHHhc----CCceEEEEeCc
Confidence 46888999999999998854 3455 44442 34688899997
No 388
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=34.76 E-value=46 Score=29.25 Aligned_cols=41 Identities=7% Similarity=-0.072 Sum_probs=29.1
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEeccc
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkd 530 (691)
.||.+++||.+++ ..|+.+.+.+.+++++. ..+.++.|.-+
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~-~~v~~~~vd~~ 70 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKF-PETKFVKAIVN 70 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHC-SSEEEEEECCS
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHC-CCcEEEEEEhh
Confidence 4689999999933 33499999999998773 34555555444
No 389
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=34.61 E-value=13 Score=32.04 Aligned_cols=24 Identities=17% Similarity=0.609 Sum_probs=19.1
Q ss_pred CCCCceeecCCCCccccee-----eeecc
Q 044391 665 GPIPERLACAECGRTMEMF-----FMYRC 688 (691)
Q Consensus 665 g~ip~~i~CpeC~R~ME~~-----v~YkC 688 (691)
.+++...-||+||+++|+- ++|-|
T Consensus 26 ~~~~~~afCPeCgq~Le~lkACGA~~yFC 54 (81)
T 2jrp_A 26 KDFSLQALCPDCRQPLQVLKACGAVDYFC 54 (81)
T ss_dssp CEEEEEEECSSSCSCCCEEEETTEEEECC
T ss_pred ccCCCcccCcchhhHHHHHHhcCCcCeee
Confidence 3567777999999999995 66665
No 390
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=33.86 E-value=49 Score=30.74 Aligned_cols=54 Identities=7% Similarity=0.055 Sum_probs=37.6
Q ss_pred hhhhhhcCCcEEEEEcc-CChhHH---HHHHHHHHHHHHH-hCCceeeEEecccChHHHHhhhh
Q 044391 482 TILEWMKEERYICLYGG-GDIEWI---RRFTTSAKAVARA-AQINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG-~D~~Wi---r~FT~~~~~Ik~~-a~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.+.++ .||.+.|+|. + .|| +...+.+.++++. .+..++++.|+.|.+ +.+++.+
T Consensus 28 ~l~~~--~gk~vvl~F~~a--~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~-~~~~~~~ 86 (197)
T 1qmv_A 28 KLSDY--KGKYVVLFFYPL--DFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQ-FTHLAWI 86 (197)
T ss_dssp EGGGG--TTSEEEEEECSC--TTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHHH
T ss_pred EHHHH--CCCeEEEEEECC--CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHH
Confidence 34455 7899999998 8 666 7777777777655 345799999999864 3344433
No 391
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=33.81 E-value=52 Score=30.34 Aligned_cols=40 Identities=13% Similarity=-0.011 Sum_probs=29.3
Q ss_pred cCcEEEEEEecCCCChhhh--HHHHHHHHhhccCCCCeeEEEEec
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLHLYREHKAREEFDYAIVWLPI 375 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~iY~~lk~~~~~~fEIVwIpi 375 (691)
.+|.+++.|++.|||.|.- +.| .++.++.+.++.++.+|+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l---~~l~~~~~~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTI---VPWSEKLPADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHH---HHHHHTCCTTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHH---HHHHHhCCCCeEEEEEeh
Confidence 6899999999999999853 334 444433345788888887
No 392
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=33.05 E-value=27 Score=32.44 Aligned_cols=52 Identities=4% Similarity=-0.059 Sum_probs=37.5
Q ss_pred CCcEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhhhhhh
Q 044391 489 EERYICLYGG-GDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKISRIV 543 (691)
Q Consensus 489 egK~I~LYgG-~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~~~~i 543 (691)
.||.+.|||. + .|| +...+.+.++.+.. +..++++.|+.|.+ +.+++-.+.+
T Consensus 32 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~-~~~~~~~~~~ 88 (198)
T 1zof_A 32 GKNGVILFFWPK--DFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSE-QVHFAWKNTP 88 (198)
T ss_dssp CSSEEEEEECSC--TTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHHTSC
T ss_pred CCCcEEEEEECC--CCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCH-HHHHHHHHhh
Confidence 5899999998 8 677 77777777776542 34799999999864 4555544443
No 393
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.32 E-value=82 Score=26.58 Aligned_cols=42 Identities=10% Similarity=0.000 Sum_probs=29.8
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhC-CceeeEEecccC
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQ-INLGMAYVGKNN 531 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~-~~~E~v~Vgkdn 531 (691)
.++ ++++|.+++ ..|+++.+.+.++++... ..+.++.|.-+.
T Consensus 22 ~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~ 65 (126)
T 1x5e_A 22 EGD-WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE 65 (126)
T ss_dssp SSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT
T ss_pred CCC-EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC
Confidence 444 788888843 456999999999977643 367777776553
No 394
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=32.28 E-value=61 Score=30.93 Aligned_cols=45 Identities=11% Similarity=-0.052 Sum_probs=34.6
Q ss_pred hhhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEeccc
Q 044391 482 TILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKN 530 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkd 530 (691)
.+.++ .||.+.|+|.+ .|| ++-.+.+.++.++. +..++++-|+.|
T Consensus 41 ~l~~~--~Gk~vlv~Fwa--twC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 41 SLGSL--RGKVLLIENVA--SLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp EGGGG--TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred cHHHc--CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 34555 89999999999 787 77677888886653 346999999875
No 395
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=32.13 E-value=55 Score=34.51 Aligned_cols=44 Identities=9% Similarity=-0.087 Sum_probs=33.8
Q ss_pred hhhhhcCCcEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeeEEeccc
Q 044391 483 ILEWMKEERYICLYGGGDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKN 530 (691)
Q Consensus 483 I~~~i~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkd 530 (691)
+.+. .||.+.|+|.+ .|| +...+.+.++++.. +..++++.|+.+
T Consensus 77 Lsdl--~GK~vLl~F~a--twC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d 124 (352)
T 2hyx_A 77 LKSL--RGKVVLIDFWA--YSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTP 124 (352)
T ss_dssp GGGG--TTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred HHHh--CCCEEEEEEEC--CCChhHHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 4444 79999999998 666 88888888887663 346999999764
No 396
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=32.03 E-value=39 Score=30.98 Aligned_cols=46 Identities=2% Similarity=-0.017 Sum_probs=34.8
Q ss_pred hhhhhcCCcEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeeEEecccCh
Q 044391 483 ILEWMKEERYICLYGG-GDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNNA 532 (691)
Q Consensus 483 I~~~i~egK~I~LYgG-~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~ 532 (691)
+.++ .||.+.|||. + .|| +...+.+.++.+.. +..++++.|+-|.+
T Consensus 26 l~~~--~gk~vvl~F~~a--~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~ 76 (187)
T 1we0_A 26 EADL--KGKWSIVVFYPA--DFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTH 76 (187)
T ss_dssp TTTT--SSSEEEEEECSC--TTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCH
T ss_pred HHHH--CCCCEEEEEECC--CCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCH
Confidence 3445 7899999998 8 787 77777777776553 34799999999864
No 397
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=31.97 E-value=31 Score=26.77 Aligned_cols=38 Identities=0% Similarity=-0.177 Sum_probs=26.1
Q ss_pred EEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 494 CLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 494 ~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.++|++++ .+|+++.+.+.+++++.+..++++.|.-+.
T Consensus 5 vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~ 43 (85)
T 1nho_A 5 IEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMV 43 (85)
T ss_dssp EEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTT
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCC
Confidence 45566622 344999999999977765567777776653
No 398
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=31.72 E-value=13 Score=31.58 Aligned_cols=42 Identities=7% Similarity=-0.088 Sum_probs=31.2
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.||.+++||.+++ .+|+.+.+.+.++++... .+.++.|.-++
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~ 77 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDE 77 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTT
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccc
Confidence 6899999999832 334889999998877643 57777776664
No 399
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=31.65 E-value=53 Score=30.15 Aligned_cols=47 Identities=2% Similarity=-0.083 Sum_probs=33.2
Q ss_pred hhhhhhcCCcEEEEEccCCh--hHHHHHHHHHHHHHHH---hCCceeeEEeccc
Q 044391 482 TILEWMKEERYICLYGGGDI--EWIRRFTTSAKAVARA---AQINLGMAYVGKN 530 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~--~Wir~FT~~~~~Ik~~---a~~~~E~v~Vgkd 530 (691)
...++ .||.+.|||+.-+ .||..-++.+.++.+. .+..+.+++|+-|
T Consensus 26 ~l~d~--~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 26 GTKDL--KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp EHHHH--TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred eHHHh--CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 44566 8999999998522 5786666666555332 3678999999865
No 400
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=31.51 E-value=25 Score=34.52 Aligned_cols=42 Identities=12% Similarity=0.005 Sum_probs=33.7
Q ss_pred CCcEEEEEccCChhHH---HHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 489 EERYICLYGGGDIEWI---RRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 489 egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.||.++++|.+ .|| +.+.+.+.++++..+..+.++.|.-+..
T Consensus 25 ~~~~v~v~f~a--~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~ 69 (287)
T 3qou_A 25 MTTPVLFYFWS--ERSQHCLQLTPILESLAAQYNGQFILAKLDCDAE 69 (287)
T ss_dssp TTSCEEEEEEC--TTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTC
T ss_pred CCCeEEEEEEC--CCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccC
Confidence 48999999999 676 9999999999877555677777776643
No 401
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=31.49 E-value=76 Score=28.66 Aligned_cols=43 Identities=2% Similarity=-0.202 Sum_probs=31.2
Q ss_pred eecCcEEEEEEecCCCChhhh--HHHH-HHHHhhccCCCCeeEEEEec
Q 044391 331 VLRRKHVLLLISSLDLSDEEI--LVLH-LYREHKAREEFDYAIVWLPI 375 (691)
Q Consensus 331 ~L~gK~VlL~fSal~~~~~e~--~~L~-iY~~lk~~~~~~fEIVwIpi 375 (691)
.-.+|.++..|++.+||.|.. +.+. +.+++.+ .++..++|.|+
T Consensus 24 ~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~--~~~v~~~~~~~ 69 (175)
T 1z6m_A 24 ESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVK--SGKVERIIKLF 69 (175)
T ss_dssp CTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHH--TTSEEEEEEEC
T ss_pred CCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhh--CCcEEEEEEeC
Confidence 345889999999999998854 4455 5565532 34688999886
No 402
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=31.47 E-value=1.1e+02 Score=23.68 Aligned_cols=14 Identities=7% Similarity=0.040 Sum_probs=10.8
Q ss_pred EEEEecCCCChhhh
Q 044391 338 LLLISSLDLSDEEI 351 (691)
Q Consensus 338 lL~fSal~~~~~e~ 351 (691)
.++|++.|||+|.-
T Consensus 3 v~~f~~~~C~~C~~ 16 (81)
T 1h75_A 3 ITIYTRNDCVQCHA 16 (81)
T ss_dssp EEEEECTTCHHHHH
T ss_pred EEEEcCCCChhHHH
Confidence 35689999998854
No 403
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=31.44 E-value=75 Score=30.42 Aligned_cols=56 Identities=7% Similarity=0.010 Sum_probs=38.8
Q ss_pred hhhhhcCCcEEEEEccC-Ch-hHHHHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhhhh
Q 044391 483 ILEWMKEERYICLYGGG-DI-EWIRRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKISR 541 (691)
Q Consensus 483 I~~~i~egK~I~LYgG~-D~-~Wir~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~~~ 541 (691)
+.+. .||.+.|+|.+ .+ ..|+.-.+.+.++.++. +..++++.|+.|.+. ..++..+
T Consensus 64 l~~~--~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~-~~~~~~~ 122 (222)
T 3ztl_A 64 LKDY--RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQY-SHLAWDN 122 (222)
T ss_dssp GGGG--TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHH-HHHHHHH
T ss_pred HHHh--CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHH-HHHHHHH
Confidence 4455 79999999984 32 55688788888876653 456999999998643 3334333
No 404
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=30.95 E-value=57 Score=30.50 Aligned_cols=53 Identities=4% Similarity=0.058 Sum_probs=37.0
Q ss_pred hhhhhcCCcEEEEEcc-CChhHH---HHHHHHHHHHHHH-hCCceeeEEecccChHHHHhhhh
Q 044391 483 ILEWMKEERYICLYGG-GDIEWI---RRFTTSAKAVARA-AQINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 483 I~~~i~egK~I~LYgG-~D~~Wi---r~FT~~~~~Ik~~-a~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
+.++ .||.+.|||. + .|| +...+.+.++.++ .+..++++.|+.|++ +.+++-.
T Consensus 31 l~~~--~gk~vvl~F~~~--~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~-~~~~~~~ 88 (202)
T 1uul_A 31 LTSY--KGKWLVLFFYPM--DFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSE-YSHLAWT 88 (202)
T ss_dssp GGGG--TTSEEEEEECSC--TTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHHH
T ss_pred HHHh--CCCeEEEEEECC--CCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHH
Confidence 4455 6899999998 8 566 6667777777655 345799999999864 3344433
No 405
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=30.28 E-value=33 Score=31.01 Aligned_cols=44 Identities=11% Similarity=0.015 Sum_probs=28.6
Q ss_pred cCCcEEEEEccCCh-hHHHHHHHHH---HHHHHHhCCceeeEEecccC
Q 044391 488 KEERYICLYGGGDI-EWIRRFTTSA---KAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 488 ~egK~I~LYgG~D~-~Wir~FT~~~---~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.+||.|+|+|.+.+ .+||.+.+.+ .++++..+..+.++.|.-+.
T Consensus 45 ~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~ 92 (172)
T 3f9u_A 45 QHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDN 92 (172)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTC
T ss_pred HcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCc
Confidence 48999999999954 4458774333 34433333367888777653
No 406
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=30.16 E-value=66 Score=30.19 Aligned_cols=41 Identities=12% Similarity=-0.057 Sum_probs=30.1
Q ss_pred cCcEEEEEEecCCCChhhhHHHH-HHHHhhccCCCCeeEEEEec
Q 044391 333 RRKHVLLLISSLDLSDEEILVLH-LYREHKAREEFDYAIVWLPI 375 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~~~L~-iY~~lk~~~~~~fEIVwIpi 375 (691)
.+|.+++.|++.|||.|.-. . .++++.++.++++.+..+|+
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~--~~~l~~~~~~~~~~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHL--EPVLSKHAKSFKDDMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHH--HHHHHHHHTTCCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHH--HHHHHHHHHHCCCCeEEEEecC
Confidence 47999999999999998542 3 44555544455788888887
No 407
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=30.02 E-value=37 Score=30.99 Aligned_cols=46 Identities=11% Similarity=-0.078 Sum_probs=35.5
Q ss_pred hhhhhhcCCcEEEEEccCChhH-H---HHHHHHHHHHHHHhCCceeeEEecccChH
Q 044391 482 TILEWMKEERYICLYGGGDIEW-I---RRFTTSAKAVARAAQINLGMAYVGKNNAK 533 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~W-i---r~FT~~~~~Ik~~a~~~~E~v~Vgkdn~~ 533 (691)
.+.+. .||.+.|||.+ .| | +.-.+.+.++.++ ..++++.|+.|.+.
T Consensus 38 ~l~~~--~gk~vvl~F~~--t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~ 87 (175)
T 1xvq_A 38 SSDQF--RGKSVLLNIFP--SVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPF 87 (175)
T ss_dssp EGGGG--TTSCEEEEECS--CCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHH
T ss_pred eHHHc--CCCEEEEEEEe--CCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHH
Confidence 34455 78999999987 56 4 7778888888766 67999999998653
No 408
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=29.57 E-value=52 Score=30.50 Aligned_cols=50 Identities=14% Similarity=0.176 Sum_probs=37.7
Q ss_pred hhhhhhcCCc-EEEEEccCChhHH-----HHHHHHHHHHHHHhCCceeeEEecccChH
Q 044391 482 TILEWMKEER-YICLYGGGDIEWI-----RRFTTSAKAVARAAQINLGMAYVGKNNAK 533 (691)
Q Consensus 482 ~I~~~i~egK-~I~LYgG~D~~Wi-----r~FT~~~~~Ik~~a~~~~E~v~Vgkdn~~ 533 (691)
+..++|..++ .+.++|.+ +|| +...+.+.++++..+..+.++-|.-|...
T Consensus 24 ~F~~~v~~~~~~vlVdF~A--~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~ 79 (137)
T 2qsi_A 24 TVDDFIAHSGKIVVLFFRG--DAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAER 79 (137)
T ss_dssp THHHHHHTSSSEEEEEECC--CTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHH
T ss_pred HHHHHHhcCCCcEEEEEeC--CccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCH
Confidence 3444555554 99999999 588 55999999998886668888888877543
No 409
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=29.39 E-value=51 Score=31.98 Aligned_cols=50 Identities=8% Similarity=0.036 Sum_probs=35.4
Q ss_pred CCcEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhhhh
Q 044391 489 EERYICLYGG-GDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKISR 541 (691)
Q Consensus 489 egK~I~LYgG-~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~~~ 541 (691)
.||.+.|||. + .|| +.-.+.+.++.++. +..++++.|+.|.+ +.+++-.+
T Consensus 55 ~Gk~vvl~F~pa--twCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~~ 109 (221)
T 2c0d_A 55 GQKYCCLLFYPL--NYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSV-YSHLAWKN 109 (221)
T ss_dssp TTCEEEEEECCC--CTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHHH
T ss_pred CCCeEEEEEEcC--CCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHH
Confidence 6899999998 8 787 66667777765542 35799999999865 33444333
No 410
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=28.96 E-value=53 Score=31.44 Aligned_cols=49 Identities=10% Similarity=0.034 Sum_probs=34.6
Q ss_pred CCcEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhhh
Q 044391 489 EERYICLYGG-GDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 489 egK~I~LYgG-~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.||.+.|||. + .|| +.-.+.+.+++++. +..++++.|+.|++ +.+++-.
T Consensus 51 ~gk~vvl~F~pa--~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~ 104 (213)
T 2i81_A 51 GKKYVLLYFYPL--DFTFVCPSEIIALDKALDAFHERNVELLGCSVDSK-YTHLAWK 104 (213)
T ss_dssp TTCEEEEEECSC--TTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHH
T ss_pred CCCeEEEEEEcC--CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHH
Confidence 6899999998 8 566 66666777765543 35799999999865 3444433
No 411
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=28.89 E-value=92 Score=26.17 Aligned_cols=24 Identities=17% Similarity=0.167 Sum_probs=17.4
Q ss_pred HHHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 412 VVKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 412 ~~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
..+.+++.++..+.|.+++ +|+.+
T Consensus 60 ~~~~l~~~~g~~~vP~v~i---~g~~i 83 (105)
T 2yan_A 60 VRQGLKAYSNWPTYPQLYV---KGELV 83 (105)
T ss_dssp HHHHHHHHHTCCSSCEEEE---TTEEE
T ss_pred HHHHHHHHHCCCCCCeEEE---CCEEE
Confidence 4555667788899999865 57765
No 412
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=28.84 E-value=66 Score=30.12 Aligned_cols=46 Identities=11% Similarity=-0.026 Sum_probs=32.6
Q ss_pred hhhhhhcCCcEEEEEccCChhHH----HHHHHHHHHHHHHh----CCceeeEEecccC
Q 044391 482 TILEWMKEERYICLYGGGDIEWI----RRFTTSAKAVARAA----QINLGMAYVGKNN 531 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG~D~~Wi----r~FT~~~~~Ik~~a----~~~~E~v~Vgkdn 531 (691)
.+.++ .||.+.|||.+ .|| +...+.+.++.+.. +..++++.|+-|.
T Consensus 35 ~l~~~--~Gk~vlv~F~a--t~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 35 TEKNL--LGKFSIIYFGF--SNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp EGGGG--TTSCEEEEEEC--TTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred eHHHc--CCCEEEEEEEC--CCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 34455 79999999998 676 55566666654432 4579999999884
No 413
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=28.74 E-value=65 Score=30.77 Aligned_cols=55 Identities=5% Similarity=0.030 Sum_probs=37.0
Q ss_pred hhhhhcCCcEEEEEcc-CChhHH---HHHHHHHHHHHHH-hCCceeeEEecccChHHHHhhhhhh
Q 044391 483 ILEWMKEERYICLYGG-GDIEWI---RRFTTSAKAVARA-AQINLGMAYVGKNNAKERFRKISRI 542 (691)
Q Consensus 483 I~~~i~egK~I~LYgG-~D~~Wi---r~FT~~~~~Ik~~-a~~~~E~v~Vgkdn~~e~v~~~~~~ 542 (691)
+.++ .||.+.|||. + .|| +.-.+.+.++.++ .+..++++.|+.|.+ +.+++-.+.
T Consensus 43 l~d~--~Gk~vvl~F~pa--t~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~~~ 102 (211)
T 2pn8_A 43 LTDY--RGKYLVFFFYPL--DFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQ-FTHLAWINT 102 (211)
T ss_dssp GGGG--TTSEEEEEECSC--TTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHHHTS
T ss_pred HHHh--CCCeEEEEEECC--CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHHHH
Confidence 4455 7999999998 8 676 5555566666544 245799999999865 344444433
No 414
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=28.35 E-value=45 Score=29.13 Aligned_cols=40 Identities=8% Similarity=-0.027 Sum_probs=27.3
Q ss_pred CCcEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEeccc
Q 044391 489 EERYICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 489 egK~I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkd 530 (691)
.||.++++|.+++ .+|+.+.+.+.++++.. .+.++.|.-+
T Consensus 39 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~ 79 (133)
T 3cxg_A 39 QNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVD 79 (133)
T ss_dssp CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEecc
Confidence 5789999999944 44588888887775543 3555555444
No 415
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=28.34 E-value=24 Score=31.60 Aligned_cols=23 Identities=22% Similarity=0.660 Sum_probs=16.3
Q ss_pred CCCceeecCCCCccccee-----eeecc
Q 044391 666 PIPERLACAECGRTMEMF-----FMYRC 688 (691)
Q Consensus 666 ~ip~~i~CpeC~R~ME~~-----v~YkC 688 (691)
.+....-||+|+.++|+. +.|-|
T Consensus 57 ~f~~~a~CPdC~q~LevLkACGAvdYFC 84 (101)
T 2jne_A 57 FIEMKALCPDCHQPLQVLKACGAVDYFC 84 (101)
T ss_dssp EEEEEEECTTTCSBCEEEEETTEEEEEE
T ss_pred hhhccccCcchhhHHHHHHHhcCcchhh
Confidence 456667788888888874 66665
No 416
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=27.96 E-value=41 Score=31.08 Aligned_cols=49 Identities=8% Similarity=0.017 Sum_probs=34.9
Q ss_pred CCcEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeeEEecccChHHHHhhhh
Q 044391 489 EERYICLYGG-GDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRKIS 540 (691)
Q Consensus 489 egK~I~LYgG-~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~~~ 540 (691)
.||.+.|||. + .|| +...+.+.+++++. +..++++.|+.|++ +.+++-.
T Consensus 30 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~-~~~~~~~ 83 (192)
T 2h01_A 30 GKKYVLLYFYPL--DFTFVCPSEIIALDKALDSFKERNVELLGCSVDSK-FTHLAWK 83 (192)
T ss_dssp TTCEEEEEECSC--SSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHH
T ss_pred CCCeEEEEEECC--CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCH-HHHHHHH
Confidence 6899999998 8 676 66677777765542 35799999999854 3444433
No 417
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=27.30 E-value=65 Score=28.79 Aligned_cols=43 Identities=14% Similarity=0.228 Sum_probs=24.3
Q ss_pred HHHHHHhhhccCCCCCCcccccC--CC--CCCCCceeecCCCCcccc
Q 044391 639 VAGLNNYLQRVHTPRHCNRLILP--DI--HGPIPERLACAECGRTME 681 (691)
Q Consensus 639 ~~Af~~y~~~~~~~~~C~~~~~p--~~--~g~ip~~i~CpeC~R~ME 681 (691)
..+++.-|...++.+.+..-.+. +- +..--....||+|+|.+-
T Consensus 35 ~k~l~~r~p~~k~y~~~~~~~lDIfG~~~~~~~s~~~~C~nC~R~va 81 (99)
T 3mhs_C 35 QQLLKTRYPDLRSYYFDPNGSLDINGLQKQQESSQYIHCENCGRDVS 81 (99)
T ss_dssp HHHHHHHCTTCCCCCCCTTSCSCTTSCCCCCTTSCEEECTTTCCEEE
T ss_pred HHHHhccCCCCCCceecCCCCcccCCCcCcccCCCeEECCCCCCCch
Confidence 34455555555555555532221 11 114556889999999874
No 418
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=27.03 E-value=30 Score=33.18 Aligned_cols=20 Identities=35% Similarity=0.831 Sum_probs=16.8
Q ss_pred CCCCceeecCCCCcccceeeee
Q 044391 665 GPIPERLACAECGRTMEMFFMY 686 (691)
Q Consensus 665 g~ip~~i~CpeC~R~ME~~v~Y 686 (691)
|..|+ +||-||.|-+.|..+
T Consensus 150 ~~~p~--~CP~Cg~~~~~F~~~ 169 (170)
T 3pwf_A 150 DEAPE--YCPVCGAPKEKFVVF 169 (170)
T ss_dssp SCCCS--BCTTTCCBGGGCEEE
T ss_pred CCCCC--CCCCCCCCHHHceec
Confidence 57888 999999999988654
No 419
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=26.81 E-value=68 Score=29.46 Aligned_cols=39 Identities=13% Similarity=-0.147 Sum_probs=29.6
Q ss_pred cCcEEEEEEecCCCChhh--hHHHH-HHHHhhccCCCCeeEEEEec
Q 044391 333 RRKHVLLLISSLDLSDEE--ILVLH-LYREHKAREEFDYAIVWLPI 375 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e--~~~L~-iY~~lk~~~~~~fEIVwIpi 375 (691)
.+|.++.+|++.+||.|. .+.|. +.++. +.++.+..+|+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~----~~~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKAL----PSDAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHS----CTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHC----CCceEEEEecc
Confidence 478999999999998874 35676 66654 34688888887
No 420
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=26.57 E-value=68 Score=27.10 Aligned_cols=43 Identities=9% Similarity=-0.035 Sum_probs=30.1
Q ss_pred cCCcEEEEEccCCh-hHHHHHHHHH---HHHHHHhCCceeeEEeccc
Q 044391 488 KEERYICLYGGGDI-EWIRRFTTSA---KAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 488 ~egK~I~LYgG~D~-~Wir~FT~~~---~~Ik~~a~~~~E~v~Vgkd 530 (691)
..||.++|+|.+.+ .+|+.+.+.+ .++++..+..+..+-|..+
T Consensus 25 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 71 (130)
T 2kuc_A 25 VEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDME 71 (130)
T ss_dssp HHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSS
T ss_pred hcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecC
Confidence 37899999999944 4558888887 6665554455666666554
No 421
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=26.55 E-value=68 Score=30.74 Aligned_cols=51 Identities=10% Similarity=0.088 Sum_probs=36.6
Q ss_pred hhhhhcCCcEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeeEEecccChHHHHhh
Q 044391 483 ILEWMKEERYICLYGG-GDIEWI---RRFTTSAKAVARAA-QINLGMAYVGKNNAKERFRK 538 (691)
Q Consensus 483 I~~~i~egK~I~LYgG-~D~~Wi---r~FT~~~~~Ik~~a-~~~~E~v~Vgkdn~~e~v~~ 538 (691)
+.++ .||.+.|||. + .|| +.-.+.+.++++.. +..++++.|+.|.+ +.+++
T Consensus 51 l~d~--~Gk~vll~F~pa--~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~ 106 (220)
T 1zye_A 51 LDDF--KGKYLVLFFYPL--DFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSH-FSHLA 106 (220)
T ss_dssp GGGG--TTSEEEEEECSC--TTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCH-HHHHH
T ss_pred HHHh--CCCeEEEEEECC--CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHH
Confidence 4455 7899999998 8 677 77777777776552 35799999999864 33433
No 422
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=26.02 E-value=64 Score=29.04 Aligned_cols=46 Identities=7% Similarity=-0.124 Sum_probs=32.9
Q ss_pred hhhhhhcCCcEEEEEcc-CChhHH---HHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 482 TILEWMKEERYICLYGG-GDIEWI---RRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG-~D~~Wi---r~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.+.++ .||.+.|||. + .|| +.=.+.+.++.++. ..++++.|+.|.+
T Consensus 37 ~l~~~--~gk~vvl~f~~~--~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~ 86 (165)
T 1q98_A 37 ALNDF--ASKRKVLNIFPS--IDTGVCATSVRKFNQQAAKL-SNTIVLCISADLP 86 (165)
T ss_dssp EGGGG--TTSEEEEEECSC--SCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCH
T ss_pred ehHHh--CCCeEEEEEECC--CCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCH
Confidence 44555 7899999986 5 566 44455666666554 6799999998865
No 423
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=26.00 E-value=13 Score=32.23 Aligned_cols=45 Identities=13% Similarity=0.020 Sum_probs=29.2
Q ss_pred hcCCcEEEEEccCCh-h--------------HHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 487 MKEERYICLYGGGDI-E--------------WIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 487 i~egK~I~LYgG~D~-~--------------Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
.+.||.+.++|.+++ . .|+.+.+.+.++++..+..+.++.|.-+.
T Consensus 18 ~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~ 77 (123)
T 1oaz_A 18 LKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQ 77 (123)
T ss_dssp TSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTS
T ss_pred HhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCC
Confidence 468999999999965 5 56678888888766544457777776653
No 424
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=25.38 E-value=75 Score=28.42 Aligned_cols=46 Identities=9% Similarity=-0.097 Sum_probs=31.4
Q ss_pred hhhhhhcCCcEEEEEcc-CChhHH---HHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 482 TILEWMKEERYICLYGG-GDIEWI---RRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 482 ~I~~~i~egK~I~LYgG-~D~~Wi---r~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
.+.++ .||.+.|||. + .|| +.-.+.+.++.++. ..++++.|+.|.+
T Consensus 36 ~l~~~--~gk~vvl~F~~~--~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~ 85 (163)
T 1psq_A 36 SLADF--DGKKKVLSVVPS--IDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLP 85 (163)
T ss_dssp EGGGG--TTSEEEEEECSC--TTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCH
T ss_pred eHHHh--CCCEEEEEEECC--CCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCH
Confidence 44555 7999999996 4 465 44455555554444 5799999998864
No 425
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=25.31 E-value=1.2e+02 Score=26.77 Aligned_cols=54 Identities=7% Similarity=0.048 Sum_probs=34.1
Q ss_pred hhhhhcCCcEEEEEccC-C-hhHHHHHHHHHHHHHHH-hCCceeeEEecccChHHHHhhh
Q 044391 483 ILEWMKEERYICLYGGG-D-IEWIRRFTTSAKAVARA-AQINLGMAYVGKNNAKERFRKI 539 (691)
Q Consensus 483 I~~~i~egK~I~LYgG~-D-~~Wir~FT~~~~~Ik~~-a~~~~E~v~Vgkdn~~e~v~~~ 539 (691)
+.++ .||.+.|||.. . -.-|+.-.+.+.++.++ .+..++++.|+.|++ +.+++.
T Consensus 30 l~~~--~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~-~~~~~~ 86 (163)
T 3gkn_A 30 LRAH--AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSV-KSHDNF 86 (163)
T ss_dssp SGGG--TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCH-HHHHHH
T ss_pred HHHh--CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHH
Confidence 3455 78888888864 2 24456666666666544 244689999999844 444443
No 426
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=25.17 E-value=28 Score=27.06 Aligned_cols=39 Identities=8% Similarity=-0.032 Sum_probs=26.7
Q ss_pred EEEEccCCh-hHHHHHHHHHHHHHHHhCCceeeEEecccC
Q 044391 493 ICLYGGGDI-EWIRRFTTSAKAVARAAQINLGMAYVGKNN 531 (691)
Q Consensus 493 I~LYgG~D~-~Wir~FT~~~~~Ik~~a~~~~E~v~Vgkdn 531 (691)
..++|++++ .+|+++.+.+.+++++.+..+.++.|.-++
T Consensus 5 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~ 44 (85)
T 1fo5_A 5 KIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVME 44 (85)
T ss_dssp EEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSS
T ss_pred EEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCC
Confidence 456666622 344999999999987755567777776653
No 427
>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17
Probab=24.97 E-value=82 Score=28.57 Aligned_cols=40 Identities=15% Similarity=0.228 Sum_probs=29.4
Q ss_pred HHHHH-hCCceeeEEecccChHHH----HhhhhhhhhhccccccC
Q 044391 513 AVARA-AQINLGMAYVGKNNAKER----FRKISRIVIQENLSHTL 552 (691)
Q Consensus 513 ~Ik~~-a~~~~E~v~Vgkdn~~e~----v~~~~~~i~~e~ls~~~ 552 (691)
+++++ .+.+|++.||.=.+|.+. -|+.++.|..|.+=|.+
T Consensus 38 al~RKyp~~~f~~~YIDI~~~~~~l~d~~~~~ae~I~ede~FYPl 82 (111)
T 1xg8_A 38 LLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPL 82 (111)
T ss_dssp HHHHHCTTSCEEEEEEETTTC---CCHHHHHHHHHHHTTSSCSSE
T ss_pred HHhCcCCCCceEEEEEeccCCccchhHHHHHHHHHHhhccccceE
Confidence 45555 578999999998776544 77888999999887754
No 428
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=24.81 E-value=60 Score=30.76 Aligned_cols=47 Identities=6% Similarity=-0.113 Sum_probs=34.2
Q ss_pred hhhhhhhcCCcEEEEEcc-CChhHH---HHHHHHHHHHHHHhCCceeeEEecccCh
Q 044391 481 ATILEWMKEERYICLYGG-GDIEWI---RRFTTSAKAVARAAQINLGMAYVGKNNA 532 (691)
Q Consensus 481 ~~I~~~i~egK~I~LYgG-~D~~Wi---r~FT~~~~~Ik~~a~~~~E~v~Vgkdn~ 532 (691)
..+.++ .||.+.|+|. + .|| +.=.+.+.++.++. ..++++.|+.|.+
T Consensus 71 v~L~d~--~Gk~vvl~F~~~--~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~ 121 (200)
T 3zrd_A 71 VALSSF--AGKRKVLNIFPS--IDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLP 121 (200)
T ss_dssp EEGGGG--TTSEEEEEECSC--CCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCH
T ss_pred EcHHHh--CCCcEEEEEECC--CCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCH
Confidence 344555 7999999886 4 455 66567777776665 5799999999865
No 429
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=23.47 E-value=44 Score=32.05 Aligned_cols=43 Identities=14% Similarity=-0.028 Sum_probs=32.3
Q ss_pred cCcEEEEEEecCCCChhhh--HHHHHHHHhhccCCCCeeEEEEec
Q 044391 333 RRKHVLLLISSLDLSDEEI--LVLHLYREHKAREEFDYAIVWLPI 375 (691)
Q Consensus 333 ~gK~VlL~fSal~~~~~e~--~~L~iY~~lk~~~~~~fEIVwIpi 375 (691)
.+|.+++-|.+.|||+|.- ++|.+.+++.++.+++..++.+|+
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v 156 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHV 156 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEecc
Confidence 4788999999999999854 223233787766567889999997
No 430
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=23.16 E-value=36 Score=29.40 Aligned_cols=28 Identities=4% Similarity=-0.198 Sum_probs=24.8
Q ss_pred CCCCCCceeecCCCCcccceeeeeccC-C
Q 044391 663 IHGPIPERLACAECGRTMEMFFMYRCC-P 690 (691)
Q Consensus 663 ~~g~ip~~i~CpeC~R~ME~~v~YkCC-h 690 (691)
..+.+|+...||=|+.+|+--|.-.|+ |
T Consensus 15 ~~~~~p~~~~CpI~~~~m~dPV~~~cG~h 43 (98)
T 1wgm_A 15 TYADACDEFLDPIMSTLMCDPVVLPSSRV 43 (98)
T ss_dssp CCCSCCTTTBCTTTCSBCSSEEECTTTCC
T ss_pred hhhcCcHhcCCcCccccccCCeECCCCCe
Confidence 356789999999999999999988898 7
No 431
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=23.01 E-value=1.5e+02 Score=24.73 Aligned_cols=41 Identities=27% Similarity=0.398 Sum_probs=30.7
Q ss_pred EccCChhHHHHHHHHHHHHHHH------------hCCceeeEEecccChHHHHhhhhhh
Q 044391 496 YGGGDIEWIRRFTTSAKAVARA------------AQINLGMAYVGKNNAKERFRKISRI 542 (691)
Q Consensus 496 YgG~D~~Wir~FT~~~~~Ik~~------------a~~~~E~v~Vgkdn~~e~v~~~~~~ 542 (691)
|-|+|.+ .|.+++++..+. -+.++|+-.-|-- ||||+.++-
T Consensus 7 frgddle---afekalkemirqarkfagtvtytldgndleiritgvp---eqvrkelak 59 (85)
T 2kl8_A 7 FRGDDLE---AFEKALKEMIRQARKFAGTVTYTLDGNDLEIRITGVP---EQVRKELAK 59 (85)
T ss_dssp EECSSHH---HHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEESCC---HHHHHHHHH
T ss_pred ecCCcHH---HHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEecCh---HHHHHHHHH
Confidence 5588887 999999886433 1678998888774 889987653
No 432
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=22.32 E-value=26 Score=29.42 Aligned_cols=25 Identities=28% Similarity=0.646 Sum_probs=18.7
Q ss_pred CcccccCCCCCCCCceeecCCCCccccee
Q 044391 655 CNRLILPDIHGPIPERLACAECGRTMEMF 683 (691)
Q Consensus 655 C~~~~~p~~~g~ip~~i~CpeC~R~ME~~ 683 (691)
|.++.+ +-.-+++..|| ||+.++.-
T Consensus 9 C~~~~~---~~~~~kT~~C~-CG~~~~~~ 33 (71)
T 1gh9_A 9 CGRALY---SREGAKTRKCV-CGRTVNVK 33 (71)
T ss_dssp TSCCEE---EETTCSEEEET-TTEEEECC
T ss_pred CCCEEE---EcCCCcEEECC-CCCeeeec
Confidence 777633 44578999999 99988753
No 433
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=22.32 E-value=80 Score=31.96 Aligned_cols=44 Identities=9% Similarity=0.101 Sum_probs=34.8
Q ss_pred hhh-cCCcEEEEEccCChhHH---HHHHHHHHHHHHHhCCceeeEEeccc
Q 044391 485 EWM-KEERYICLYGGGDIEWI---RRFTTSAKAVARAAQINLGMAYVGKN 530 (691)
Q Consensus 485 ~~i-~egK~I~LYgG~D~~Wi---r~FT~~~~~Ik~~a~~~~E~v~Vgkd 530 (691)
+.| +.++.++++|.+ .|| +++.+.+.++++..+..+.++.|.-|
T Consensus 29 ~~i~~~~~~vlV~F~A--~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d 76 (298)
T 3ed3_A 29 KAIHNTNYTSLVEFYA--PWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCD 76 (298)
T ss_dssp HHHTSSSSCEEEEEEC--TTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT
T ss_pred HHHHhCCCeEEEEEEC--CCCHHHHHHHHHHHHHHHHccCCcEEEEEEcc
Confidence 345 468999999999 565 99999999998876656778887665
No 434
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=21.20 E-value=44 Score=27.01 Aligned_cols=23 Identities=4% Similarity=0.073 Sum_probs=16.4
Q ss_pred HHHHHHhhCcCCceEEEEeCCCCcee
Q 044391 413 VKYAKEVWKFSKKAILVPVDPQGRIL 438 (691)
Q Consensus 413 ~r~ike~f~~~~iP~LVvL~pqGkv~ 438 (691)
...+.+.+++...|.|++ +|+.+
T Consensus 56 ~~~l~~~~g~~~vP~l~~---~g~~i 78 (92)
T 3ic4_A 56 IEKVHSISGSYSVPVVVK---GDKHV 78 (92)
T ss_dssp HHHHHHHHSSSCSCEEEE---TTEEE
T ss_pred HHHHHHhcCCCCcCEEEE---CCEEE
Confidence 345556678889999988 66543
No 435
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=20.42 E-value=41 Score=26.80 Aligned_cols=14 Identities=14% Similarity=0.190 Sum_probs=8.0
Q ss_pred CCCCceeecCCCCc
Q 044391 665 GPIPERLACAECGR 678 (691)
Q Consensus 665 g~ip~~i~CpeC~R 678 (691)
++..+...||+||.
T Consensus 6 ~~ll~~~~Cp~C~~ 19 (58)
T 1dl6_A 6 LDALPRVTCPNHPD 19 (58)
T ss_dssp CCCCSCCSBTTBSS
T ss_pred hhccccccCcCCCC
Confidence 44555556666655
No 436
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=20.20 E-value=20 Score=37.19 Aligned_cols=35 Identities=9% Similarity=-0.080 Sum_probs=23.8
Q ss_pred ceeecceecCcEEEEEEecCCCChhhhHHHH-HHHHhh
Q 044391 325 TRVNIEVLRRKHVLLLISSLDLSDEEILVLH-LYREHK 361 (691)
Q Consensus 325 ~kV~Is~L~gK~VlL~fSal~~~~~e~~~L~-iY~~lk 361 (691)
.+..+...-++.....|.+.||++|.- +. +++++.
T Consensus 188 ~~~~la~~l~~~~vV~F~A~WC~~Ck~--l~p~le~lA 223 (291)
T 3kp9_A 188 LAVGLAAHLRQIGGTMYGAYWCPHCQD--QKELFGAAF 223 (291)
T ss_dssp THHHHHHHHHHTTCEEEECTTCHHHHH--HHHHHGGGG
T ss_pred HHHHHHHHhCCCCEEEEECCCCHHHHH--HHHHHHHHH
Confidence 445555544556678999999999853 45 666664
Done!