BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044394
KGKTHVQDKNPGKNPNNVQNPNRKENQDVEYDGRIHSHPCKKYGPYKCPKCNGAFGTSQA
FAAHMRSHYKYETSAERKRRLSARLKKRNLRLVHSTEGLTMMPQPSNEQMRVKARKRNGH
GEANTSVEIEVEVEKLLKID

High Scoring Gene Products

Symbol, full name Information P value
AT2G18490 protein from Arabidopsis thaliana 6.3e-07
AT2G15740 protein from Arabidopsis thaliana 1.5e-06
AT5G42640 protein from Arabidopsis thaliana 2.0e-05
AT5G22990 protein from Arabidopsis thaliana 0.00022

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044394
        (140 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2046318 - symbol:AT2G18490 "AT2G18490" species...   118  6.3e-07   1
TAIR|locus:2053598 - symbol:AT2G15740 "AT2G15740" species...   117  1.5e-06   1
TAIR|locus:2163857 - symbol:AT5G42640 "AT5G42640" species...   106  2.0e-05   1
TAIR|locus:2172716 - symbol:AT5G22990 "AT5G22990" species...    97  0.00022   1


>TAIR|locus:2046318 [details] [associations]
            symbol:AT2G18490 "AT2G18490" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR015880
            PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 EMBL:CP002685
            GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 EMBL:AC006135
            ProtClustDB:CLSN2683049 EMBL:AB493552 IPI:IPI00531928 PIR:H84564
            RefSeq:NP_179439.1 UniGene:At.52807 PRIDE:Q9ZU64
            EnsemblPlants:AT2G18490.1 GeneID:816364 KEGG:ath:AT2G18490
            TAIR:At2g18490 InParanoid:Q9ZU64 OMA:YGESQKI PhylomeDB:Q9ZU64
            ArrayExpress:Q9ZU64 Genevestigator:Q9ZU64 Uniprot:Q9ZU64
        Length = 251

 Score = 118 (46.6 bits), Expect = 6.3e-07, P = 6.3e-07
 Identities = 26/64 (40%), Positives = 32/64 (50%)

Query:    13 KNPNNVQNPNRKENQDVEYDGRIHSHXXXXXXXXXXXXXNGAFGTSQAFAAHMRSHYKYE 72
             K    +     +++ D +YDGRIHS              N  F TSQ FAAHM SHYK E
Sbjct:   136 KTTEYIDCEENEKSDDAQYDGRIHSLPYKKYGPYTCPKCNSIFDTSQKFAAHMSSHYKSE 195

Query:    73 TSAE 76
             T+ E
Sbjct:   196 TNKE 199


>TAIR|locus:2053598 [details] [associations]
            symbol:AT2G15740 "AT2G15740" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR015880
            PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0008270 GO:GO:0003700 GO:GO:0005622
            EMBL:AC006248 HOGENOM:HOG000152437 ProtClustDB:CLSN2683049
            EMBL:AB493548 IPI:IPI00524627 PIR:G84532 RefSeq:NP_179176.1
            UniGene:At.66204 ProteinModelPortal:Q9ZQE0 SMR:Q9ZQE0
            EnsemblPlants:AT2G15740.1 GeneID:816068 KEGG:ath:AT2G15740
            TAIR:At2g15740 eggNOG:NOG265797 InParanoid:Q9ZQE0 OMA:SHYKNET
            PhylomeDB:Q9ZQE0 ArrayExpress:Q9ZQE0 Genevestigator:Q9ZQE0
            Uniprot:Q9ZQE0
        Length = 329

 Score = 117 (46.2 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 28/55 (50%), Positives = 28/55 (50%)

Query:    22 NRKENQDVEYDGRIHSHXXXXXXXXXXXXXNGAFGTSQAFAAHMRSHYKYETSAE 76
             N K N D   DGR HS              NG F TSQ FAAHM SHYK ETS E
Sbjct:   221 NEKSNND-HNDGRTHSLPYEKYGPYTCPKCNGVFNTSQKFAAHMSSHYKNETSEE 274


>TAIR|locus:2163857 [details] [associations]
            symbol:AT5G42640 "AT5G42640" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR015880
            PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003700 GO:GO:0005622
            EMBL:AB013391 HOGENOM:HOG000152437 ProtClustDB:CLSN2683049
            IPI:IPI00526950 RefSeq:NP_199078.1 UniGene:At.55321
            EnsemblPlants:AT5G42640.1 GeneID:834272 KEGG:ath:AT5G42640
            TAIR:At5g42640 eggNOG:NOG327151 InParanoid:Q9FJV4 OMA:NIVFPHQ
            PhylomeDB:Q9FJV4 Genevestigator:Q9FJV4 Uniprot:Q9FJV4
        Length = 300

 Score = 106 (42.4 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 26/62 (41%), Positives = 29/62 (46%)

Query:    16 NNVQNPNRKENQDV-EYDGRIHSHXXXXXXXXXXXXXNGAFGTSQAFAAHMRSHYKYETS 74
             +N  +    E  D  +YDGR HS              NG F TSQ FAAHM SHY  ET 
Sbjct:   212 SNSYDSQEDEKIDAYQYDGRTHSLPYTKYGPYTCPRCNGVFDTSQKFAAHMLSHYNNETD 271

Query:    75 AE 76
              E
Sbjct:   272 KE 273


>TAIR|locus:2172716 [details] [associations]
            symbol:AT5G22990 "AT5G22990" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR015880
            PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003700 GO:GO:0005622
            EMBL:AB005243 EMBL:AB026660 IPI:IPI00539123 RefSeq:NP_197690.1
            UniGene:At.65541 PaxDb:Q9FFA9 PRIDE:Q9FFA9 DNASU:832363
            EnsemblPlants:AT5G22990.1 GeneID:832363 KEGG:ath:AT5G22990
            TAIR:At5g22990 eggNOG:NOG260799 HOGENOM:HOG000152437
            InParanoid:Q9FFA9 OMA:HISSMHY PhylomeDB:Q9FFA9
            ProtClustDB:CLSN2683049 Genevestigator:Q9FFA9 Uniprot:Q9FFA9
        Length = 324

 Score = 97 (39.2 bits), Expect = 0.00022, P = 0.00022
 Identities = 23/51 (45%), Positives = 27/51 (52%)

Query:    27 QDVEYDGRIHSHXXXXXXXXXXXXXNGAFGTSQAFAAHMRS-HYKYETSAE 76
             +D+EYDGR HS              N  F TSQ FAAH+ S HYK E+  E
Sbjct:   227 KDIEYDGRTHSLPYEKYGPYTCPKCNSVFDTSQKFAAHISSMHYKNESIEE 277


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.306   0.122   0.353    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      140        98   0.00091  102 3  11 23  0.49    30
                                                     29  0.45    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  499 (53 KB)
  Total size of DFA:  107 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.77u 0.12s 10.89t   Elapsed:  00:00:00
  Total cpu time:  10.77u 0.12s 10.89t   Elapsed:  00:00:00
  Start:  Mon May 20 15:22:19 2013   End:  Mon May 20 15:22:19 2013

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