BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044398
(193 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3OQ3|B Chain B, Structural Basis Of Type-I Interferon Sequestration By A
Poxvirus Decoy Receptor
Length = 329
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 36/88 (40%)
Query: 68 VQVVPPVANSSTAFGLMNMIDDPLTEGPELSSKMLGRAQGFYAAASQQEVGLLMAMNFAF 127
V + P + TA ++DD L + S ++G G Y+ + + F
Sbjct: 240 VTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFEN 299
Query: 128 IKGKYNGSTFTVLGRNTVFSKVREMPVI 155
+ +Y G+T+T G N F K V+
Sbjct: 300 VTEEYIGNTYTCRGHNYYFDKTLTTTVV 327
>pdb|1ZK7|A Chain A, Crystal Structure Of Tn501 Mera
pdb|1ZX9|A Chain A, Crystal Structure Of Tn501 Mera
Length = 467
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Query: 117 VGLLMAMNFAFIKGKYNGSTFTVLGRNTVFSKVREMPVIGG--TGVFR 162
V L +A FA + GS TVL RNT+F RE P IG T FR
Sbjct: 187 VALELAQAFARL-----GSKVTVLARNTLF--FREDPAIGEAVTAAFR 227
>pdb|3MP2|A Chain A, Crystal Structure Of Transmissible Gastroenteritis Virus
Papain-Like Protease 1
Length = 211
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 54 LFWHDILSGTSPTAVQVVPPVANSSTAFGLMN---MIDD 89
+F HDILS +P A+ VV PV ++ N M+DD
Sbjct: 141 VFVHDILSKQTPEAMFVVKPVMHAVYTGTTQNGHYMVDD 179
>pdb|1P8S|A Chain A, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8S|B Chain B, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8S|C Chain C, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase I
Length = 314
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 203 IGKVMEETFSYLLGRKKRPIHLSFCVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 259
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 260 YKTGLLSGLDIMEVN 274
>pdb|2RLA|A Chain A, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|2RLA|B Chain B, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|2RLA|C Chain C, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
Length = 323
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 208 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 264
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 265 YKTGLLSGLDIMEVN 279
>pdb|1P8Q|A Chain A, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Cluster Of Arginase I.
pdb|1P8Q|B Chain B, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Cluster Of Arginase I.
pdb|1P8Q|C Chain C, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Cluster Of Arginase I
Length = 314
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 203 IGKVMEETFSYLLGRKKRPIHLSFDVEGLDPVFTPATGTPVVGG---LSYREGLYITEEI 259
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 260 YKTGLLSGLDIMEVN 274
>pdb|1P8N|A Chain A, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8N|B Chain B, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8N|C Chain C, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase I
Length = 314
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 203 IGKVMEETFSYLLGRKKRPIHLSFAVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 259
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 260 YKTGLLSGLDIMEVN 274
>pdb|3E8Z|A Chain A, X-Ray Structure Of Rat Arginase I-N130a Mutant: The
Unliganded Complex
pdb|3E8Z|B Chain B, X-Ray Structure Of Rat Arginase I-N130a Mutant: The
Unliganded Complex
pdb|3E8Z|C Chain C, X-Ray Structure Of Rat Arginase I-N130a Mutant: The
Unliganded Complex
Length = 323
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 208 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 264
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 265 YKTGLLSGLDIMEVN 279
>pdb|1HQX|A Chain A, R308k Arginase Variant
pdb|1HQX|B Chain B, R308k Arginase Variant
pdb|1HQX|C Chain C, R308k Arginase Variant
Length = 323
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 208 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 264
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 265 YKTGLLSGLDIMEVN 279
>pdb|1RLA|A Chain A, Three-Dimensional Structure Of Rat Liver Arginase, The
Binuclear Manganese Metalloenzyme Of The Urea Cycle
pdb|1RLA|B Chain B, Three-Dimensional Structure Of Rat Liver Arginase, The
Binuclear Manganese Metalloenzyme Of The Urea Cycle
pdb|1RLA|C Chain C, Three-Dimensional Structure Of Rat Liver Arginase, The
Binuclear Manganese Metalloenzyme Of The Urea Cycle
pdb|1D3V|A Chain A, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With 2(S)-Amino-6-Boronohexanoic
Acid, An L-Arginine Analog
pdb|1D3V|B Chain B, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With 2(S)-Amino-6-Boronohexanoic
Acid, An L-Arginine Analog
pdb|1HQ5|A Chain A, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With S-(2-Boronoethyl)-L-Cysteine, An
L-Arginine Analogue
pdb|1HQ5|B Chain B, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With S-(2-Boronoethyl)-L-Cysteine, An
L-Arginine Analogue
pdb|1HQF|A Chain A, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With N-Hydroxy-L-Arginine
pdb|1HQF|B Chain B, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With N-Hydroxy-L-Arginine
pdb|1HQF|C Chain C, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With N-Hydroxy-L-Arginine
pdb|1HQH|A Chain A, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With Nor-N-Hydroxy-L-Arginine
pdb|1HQH|B Chain B, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With Nor-N-Hydroxy-L-Arginine
pdb|1HQH|C Chain C, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With Nor-N-Hydroxy-L-Arginine
pdb|1R1O|A Chain A, Amino Acid Sulfonamides As Transition-State Analogue
Inhibitors Of Arginase
pdb|1R1O|B Chain B, Amino Acid Sulfonamides As Transition-State Analogue
Inhibitors Of Arginase
pdb|1R1O|C Chain C, Amino Acid Sulfonamides As Transition-State Analogue
Inhibitors Of Arginase
Length = 323
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 208 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 264
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 265 YKTGLLSGLDIMEVN 279
>pdb|3E8Q|A Chain A, X-Ray Structure Of Rat Arginase I-T135a: The Unliganded
Complex
pdb|3E8Q|B Chain B, X-Ray Structure Of Rat Arginase I-T135a: The Unliganded
Complex
pdb|3E8Q|C Chain C, X-Ray Structure Of Rat Arginase I-T135a: The Unliganded
Complex
pdb|3E9B|A Chain A, X-Ray Structure Of Rat Arginase I-T135a Mutant: The
Complex With Bec
pdb|3E9B|B Chain B, X-Ray Structure Of Rat Arginase I-T135a Mutant: The
Complex With Bec
pdb|3E9B|C Chain C, X-Ray Structure Of Rat Arginase I-T135a Mutant: The
Complex With Bec
Length = 323
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 208 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 264
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 265 YKTGLLSGLDIMEVN 279
>pdb|1HQG|A Chain A, Crystal Structure Of The H141c Arginase Variant Complexed
With Products Ornithine And Urea
pdb|1HQG|B Chain B, Crystal Structure Of The H141c Arginase Variant Complexed
With Products Ornithine And Urea
pdb|1HQG|C Chain C, Crystal Structure Of The H141c Arginase Variant Complexed
With Products Ornithine And Urea
Length = 323
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 208 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 264
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 265 YKTGLLSGLDIMEVN 279
>pdb|3RLA|A Chain A, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|3RLA|B Chain B, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|3RLA|C Chain C, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|4RLA|A Chain A, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|4RLA|B Chain B, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|4RLA|C Chain C, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|5RLA|A Chain A, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|5RLA|B Chain B, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|5RLA|C Chain C, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
Length = 323
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 208 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 264
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 265 YKTGLLSGLDIMEVN 279
>pdb|1P8M|A Chain A, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8M|B Chain B, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8M|C Chain C, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase I
Length = 314
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 203 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 259
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 260 YKTGLLSGLDIMEVN 274
>pdb|1TBJ|A Chain A, H141a Mutant Of Rat Liver Arginase I
pdb|1TBJ|B Chain B, H141a Mutant Of Rat Liver Arginase I
pdb|1TBJ|C Chain C, H141a Mutant Of Rat Liver Arginase I
Length = 314
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 203 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 259
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 260 YKTGLLSGLDIMEVN 274
>pdb|1TA1|A Chain A, H141c Mutant Of Rat Liver Arginase I
pdb|1TA1|B Chain B, H141c Mutant Of Rat Liver Arginase I
pdb|1TA1|C Chain C, H141c Mutant Of Rat Liver Arginase I
Length = 314
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 203 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 259
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 260 YKTGLLSGLDIMEVN 274
>pdb|1T4S|A Chain A, Arginase-L-Valine Complex
pdb|1T4S|B Chain B, Arginase-L-Valine Complex
pdb|1T4S|C Chain C, Arginase-L-Valine Complex
pdb|1T4P|A Chain A, Arginase-Dehydro-Abh Complex
pdb|1T4P|B Chain B, Arginase-Dehydro-Abh Complex
pdb|1T4P|C Chain C, Arginase-Dehydro-Abh Complex
pdb|1T4R|A Chain A, Arginase-descarboxy-nor-noha Complex
pdb|1T4R|B Chain B, Arginase-descarboxy-nor-noha Complex
pdb|1T4R|C Chain C, Arginase-descarboxy-nor-noha Complex
pdb|1T4T|A Chain A, Arginase-Dinor-Noha Complex
pdb|1T4T|B Chain B, Arginase-Dinor-Noha Complex
pdb|1T4T|C Chain C, Arginase-Dinor-Noha Complex
Length = 314
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 203 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 259
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 260 YKTGLLSGLDIMEVN 274
>pdb|1TBH|A Chain A, H141d Mutant Of Rat Liver Arginase I
pdb|1TBH|B Chain B, H141d Mutant Of Rat Liver Arginase I
pdb|1TBH|C Chain C, H141d Mutant Of Rat Liver Arginase I
Length = 314
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 203 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 259
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 260 YKTGLLSGLDIMEVN 274
>pdb|1P8O|A Chain A, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8O|B Chain B, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8O|C Chain C, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase I
Length = 314
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 203 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 259
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 260 YKTGLLSGLDIMEVN 274
>pdb|1TBL|A Chain A, H141n Mutant Of Rat Liver Arginase I
pdb|1TBL|B Chain B, H141n Mutant Of Rat Liver Arginase I
pdb|1TBL|C Chain C, H141n Mutant Of Rat Liver Arginase I
Length = 314
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 203 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 259
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 260 YKTGLLSGLDIMEVN 274
>pdb|1P8P|A Chain A, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8P|B Chain B, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8P|C Chain C, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase I
Length = 314
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 203 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 259
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 260 YKTGLLSGLDIMEVN 274
>pdb|1P8R|A Chain A, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8R|B Chain B, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase I
Length = 308
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 203 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 259
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 260 YKTGLLSGLDIMEVN 274
>pdb|1T5G|A Chain A, Arginase-F2-L-Arginine Complex
pdb|1T5G|B Chain B, Arginase-F2-L-Arginine Complex
pdb|1T5G|C Chain C, Arginase-F2-L-Arginine Complex
pdb|1T5F|A Chain A, Arginase I-Aoh Complex
pdb|1T5F|B Chain B, Arginase I-Aoh Complex
pdb|1T5F|C Chain C, Arginase I-Aoh Complex
Length = 314
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 203 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 259
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 260 YKTGLLSGLDIMEVN 274
>pdb|1ZPE|A Chain A, Arginase I Covalently Modified With Butylamine At Q19c
pdb|1ZPE|B Chain B, Arginase I Covalently Modified With Butylamine At Q19c
pdb|1ZPE|C Chain C, Arginase I Covalently Modified With Butylamine At Q19c
pdb|1ZPG|A Chain A, Arginase I Covalently Modified With Propylamine At Q19c
pdb|1ZPG|B Chain B, Arginase I Covalently Modified With Propylamine At Q19c
pdb|1ZPG|C Chain C, Arginase I Covalently Modified With Propylamine At Q19c
Length = 314
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 117 VGLLMAMNFAFIKGKYNGS---TFTVLGRNTVFSKVREMPVIGGTGVFRFARG-YVQAKT 172
+G +M F+++ G+ +F V G + VF+ PV+GG + G Y+ +
Sbjct: 203 IGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGG---LSYREGLYITEEI 259
Query: 173 YKFDQNSGDATVEYN 187
YK SG +E N
Sbjct: 260 YKTGLLSGLDIMEVN 274
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,035,919
Number of Sequences: 62578
Number of extensions: 189038
Number of successful extensions: 345
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 344
Number of HSP's gapped (non-prelim): 26
length of query: 193
length of database: 14,973,337
effective HSP length: 93
effective length of query: 100
effective length of database: 9,153,583
effective search space: 915358300
effective search space used: 915358300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)