Query 044402
Match_columns 127
No_of_seqs 115 out of 1558
Neff 11.3
Searched_HMMs 46136
Date Fri Mar 29 02:57:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044402.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044402hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 100.0 6.2E-32 1.3E-36 156.9 7.3 125 1-126 37-172 (226)
2 KOG4412 26S proteasome regulat 100.0 1.4E-29 2.9E-34 147.2 9.0 121 1-122 71-202 (226)
3 PHA02791 ankyrin-like protein; 99.9 7.7E-26 1.7E-30 143.9 12.9 115 2-118 94-220 (284)
4 PHA02791 ankyrin-like protein; 99.9 3E-25 6.5E-30 141.2 12.4 111 2-115 61-182 (284)
5 PHA02875 ankyrin repeat protei 99.9 1.3E-24 2.8E-29 145.3 13.2 117 2-119 102-229 (413)
6 PHA02741 hypothetical protein; 99.9 2E-24 4.3E-29 128.8 11.9 114 1-115 20-154 (169)
7 PHA02875 ankyrin repeat protei 99.9 2.1E-24 4.5E-29 144.3 13.1 92 23-115 99-190 (413)
8 KOG0509 Ankyrin repeat and DHH 99.9 6.1E-25 1.3E-29 147.4 10.4 120 2-122 78-208 (600)
9 PHA02859 ankyrin repeat protei 99.9 6.8E-24 1.5E-28 130.3 12.8 119 1-120 50-187 (209)
10 PHA02743 Viral ankyrin protein 99.9 5.1E-24 1.1E-28 126.7 11.2 117 2-119 20-155 (166)
11 PHA02736 Viral ankyrin protein 99.9 1.9E-24 4.1E-29 127.2 9.0 114 1-115 16-148 (154)
12 KOG0509 Ankyrin repeat and DHH 99.9 8.6E-25 1.9E-29 146.7 7.9 113 2-115 112-234 (600)
13 PHA02878 ankyrin repeat protei 99.9 1.2E-23 2.7E-28 142.8 13.0 98 17-115 158-257 (477)
14 PHA02878 ankyrin repeat protei 99.9 1.2E-23 2.7E-28 142.8 12.4 117 2-121 168-296 (477)
15 PHA02874 ankyrin repeat protei 99.9 2.2E-23 4.9E-28 140.1 13.3 100 16-116 114-213 (434)
16 PHA03095 ankyrin-like protein; 99.9 2.4E-23 5.2E-28 141.1 12.5 117 1-118 186-316 (471)
17 KOG0502 Integral membrane anky 99.9 8.2E-24 1.8E-28 126.8 7.7 122 2-124 129-258 (296)
18 PHA02874 ankyrin repeat protei 99.9 8.8E-23 1.9E-27 137.3 13.6 116 1-116 34-180 (434)
19 PHA03100 ankyrin repeat protei 99.9 5.5E-23 1.2E-27 139.6 12.5 113 2-115 176-305 (480)
20 KOG0510 Ankyrin repeat protein 99.9 3E-23 6.4E-28 142.7 10.3 118 1-118 272-402 (929)
21 PLN03192 Voltage-dependent pot 99.9 8.1E-23 1.8E-27 146.0 12.8 108 13-121 545-684 (823)
22 PHA02859 ankyrin repeat protei 99.9 3.1E-22 6.7E-27 123.0 12.9 116 1-119 20-152 (209)
23 PHA02989 ankyrin repeat protei 99.9 1.3E-22 2.9E-27 138.3 12.4 114 2-115 145-311 (494)
24 PHA02798 ankyrin-like protein; 99.9 1.1E-22 2.4E-27 138.5 12.0 118 1-118 108-317 (489)
25 PHA02716 CPXV016; CPX019; EVM0 99.9 1.4E-22 2.9E-27 141.9 12.2 118 1-119 176-346 (764)
26 PHA03100 ankyrin repeat protei 99.9 1.7E-22 3.7E-27 137.2 12.4 117 2-119 68-203 (480)
27 PHA02876 ankyrin repeat protei 99.9 1.9E-22 4.1E-27 141.9 13.0 119 2-121 341-472 (682)
28 PHA02884 ankyrin repeat protei 99.9 3E-22 6.4E-27 127.9 12.5 107 2-108 32-152 (300)
29 PHA02716 CPXV016; CPX019; EVM0 99.9 1.7E-22 3.8E-27 141.3 12.3 119 1-120 211-394 (764)
30 PHA02946 ankyin-like protein; 99.9 2.5E-22 5.3E-27 135.2 12.3 52 2-53 72-134 (446)
31 PHA03095 ankyrin-like protein; 99.9 5.6E-22 1.2E-26 134.4 13.5 118 1-119 46-181 (471)
32 KOG0508 Ankyrin repeat protein 99.9 1.1E-22 2.4E-27 133.2 8.7 114 2-116 84-206 (615)
33 PF12796 Ank_2: Ankyrin repeat 99.9 2.1E-21 4.5E-26 104.4 10.4 86 30-120 1-87 (89)
34 PHA02946 ankyin-like protein; 99.9 3.7E-21 8.1E-26 129.6 13.1 112 3-116 38-163 (446)
35 KOG4177 Ankyrin [Cell wall/mem 99.9 5.8E-22 1.3E-26 141.9 9.4 116 2-118 507-631 (1143)
36 PHA02876 ankyrin repeat protei 99.9 2.8E-21 6E-26 136.1 12.8 117 2-119 273-402 (682)
37 PHA02989 ankyrin repeat protei 99.9 4.2E-21 9.2E-26 131.0 12.9 103 13-115 131-278 (494)
38 PHA02795 ankyrin-like protein; 99.9 4.1E-21 8.9E-26 127.3 11.6 93 26-119 188-289 (437)
39 KOG0514 Ankyrin repeat protein 99.9 5.3E-22 1.1E-26 126.4 6.7 118 1-119 267-399 (452)
40 PHA02798 ankyrin-like protein; 99.9 4.7E-21 1E-25 130.6 11.6 106 13-119 58-175 (489)
41 PHA02795 ankyrin-like protein; 99.9 1.5E-20 3.3E-25 124.6 12.1 118 1-120 115-249 (437)
42 KOG0508 Ankyrin repeat protein 99.9 1.3E-21 2.9E-26 128.3 6.7 111 3-115 118-237 (615)
43 KOG0510 Ankyrin repeat protein 99.8 3.7E-20 8.1E-25 127.7 10.6 100 15-114 214-327 (929)
44 PHA02741 hypothetical protein; 99.8 1E-19 2.2E-24 108.6 10.5 96 19-115 14-120 (169)
45 KOG0502 Integral membrane anky 99.8 3E-20 6.5E-25 111.7 7.7 120 1-122 159-288 (296)
46 KOG0512 Fetal globin-inducing 99.8 9.4E-20 2E-24 105.9 9.4 97 18-115 89-186 (228)
47 KOG0514 Ankyrin repeat protein 99.8 7.4E-20 1.6E-24 116.8 9.6 117 2-119 302-433 (452)
48 PHA02917 ankyrin-like protein; 99.8 1.6E-19 3.4E-24 126.2 12.2 116 1-119 31-165 (661)
49 cd00204 ANK ankyrin repeats; 99.8 7.8E-19 1.7E-23 99.2 11.8 112 1-113 6-126 (126)
50 KOG4177 Ankyrin [Cell wall/mem 99.8 7.1E-20 1.5E-24 131.4 9.0 120 2-122 440-603 (1143)
51 PHA02730 ankyrin-like protein; 99.8 3.2E-19 6.9E-24 123.4 11.7 117 1-118 377-524 (672)
52 KOG0195 Integrin-linked kinase 99.8 1.3E-19 2.7E-24 113.2 8.3 103 17-120 25-128 (448)
53 PHA02730 ankyrin-like protein; 99.8 4.2E-19 9E-24 122.8 10.6 115 1-115 40-177 (672)
54 PHA02917 ankyrin-like protein; 99.8 4.5E-19 9.8E-24 124.0 10.7 105 13-118 123-256 (661)
55 PF12796 Ank_2: Ankyrin repeat 99.8 1E-18 2.2E-23 93.9 8.7 80 6-90 1-89 (89)
56 PHA02743 Viral ankyrin protein 99.8 7.6E-19 1.7E-23 104.5 8.6 98 16-114 10-115 (166)
57 PHA02884 ankyrin repeat protei 99.8 2.3E-18 5.1E-23 110.1 11.0 99 21-120 27-132 (300)
58 KOG0195 Integrin-linked kinase 99.8 9E-19 1.9E-23 109.4 8.0 100 2-102 34-142 (448)
59 PLN03192 Voltage-dependent pot 99.8 2.1E-18 4.5E-23 123.6 10.8 103 1-104 557-700 (823)
60 KOG0505 Myosin phosphatase, re 99.8 2.5E-18 5.5E-23 114.0 7.8 119 1-119 72-258 (527)
61 KOG0507 CASK-interacting adapt 99.8 1.2E-18 2.7E-23 119.5 6.5 114 1-115 48-170 (854)
62 TIGR00870 trp transient-recept 99.8 3.7E-18 8E-23 121.4 8.2 114 1-115 127-279 (743)
63 COG0666 Arp FOG: Ankyrin repea 99.8 2.6E-17 5.5E-22 101.6 10.9 114 2-115 73-202 (235)
64 PHA02736 Viral ankyrin protein 99.7 5.9E-18 1.3E-22 99.6 6.2 86 1-87 54-153 (154)
65 cd00204 ANK ankyrin repeats; 99.7 1.4E-16 2.9E-21 90.0 11.4 95 21-116 2-96 (126)
66 KOG3676 Ca2+-permeable cation 99.7 3.4E-17 7.4E-22 113.2 9.8 114 1-115 183-330 (782)
67 PHA02792 ankyrin-like protein; 99.7 4.5E-17 9.8E-22 112.0 9.1 114 2-115 71-239 (631)
68 PF13637 Ank_4: Ankyrin repeat 99.7 4.1E-17 8.8E-22 79.7 6.0 54 60-113 1-54 (54)
69 PTZ00322 6-phosphofructo-2-kin 99.7 2E-16 4.3E-21 111.2 11.6 86 29-115 85-170 (664)
70 TIGR00870 trp transient-recept 99.7 1.1E-16 2.4E-21 114.0 9.5 58 59-116 127-198 (743)
71 KOG0512 Fetal globin-inducing 99.7 1.2E-16 2.5E-21 93.2 7.8 95 29-123 66-161 (228)
72 PHA02792 ankyrin-like protein; 99.7 2.1E-16 4.5E-21 108.8 10.3 115 4-119 341-480 (631)
73 KOG4214 Myotrophin and similar 99.7 2.9E-16 6.4E-21 82.5 7.9 84 30-115 6-89 (117)
74 KOG4214 Myotrophin and similar 99.7 1.7E-16 3.7E-21 83.4 5.8 87 13-101 22-108 (117)
75 PF13637 Ank_4: Ankyrin repeat 99.7 2.6E-16 5.6E-21 76.9 5.9 54 26-80 1-54 (54)
76 KOG1710 MYND Zn-finger and ank 99.7 7.1E-16 1.5E-20 96.3 8.8 103 13-115 31-134 (396)
77 PF13857 Ank_5: Ankyrin repeat 99.7 1.4E-16 2.9E-21 78.3 3.8 54 46-100 2-56 (56)
78 KOG0507 CASK-interacting adapt 99.6 7.1E-16 1.5E-20 106.3 6.2 122 1-123 81-220 (854)
79 PTZ00322 6-phosphofructo-2-kin 99.6 3.5E-15 7.7E-20 105.0 9.0 96 5-101 85-196 (664)
80 PF13857 Ank_5: Ankyrin repeat 99.6 8.9E-16 1.9E-20 75.4 3.8 52 15-67 4-56 (56)
81 KOG0515 p53-interacting protei 99.6 6.3E-15 1.4E-19 98.5 7.9 85 30-115 554-638 (752)
82 KOG3676 Ca2+-permeable cation 99.6 1.1E-14 2.5E-19 101.0 8.6 115 2-116 143-296 (782)
83 COG0666 Arp FOG: Ankyrin repea 99.5 2.7E-13 5.9E-18 83.5 10.4 100 20-120 67-175 (235)
84 KOG0505 Myosin phosphatase, re 99.5 4.1E-13 8.9E-18 89.7 9.4 106 13-119 60-225 (527)
85 KOG0515 p53-interacting protei 99.5 4.6E-13 1E-17 89.8 8.1 101 13-114 570-673 (752)
86 KOG0818 GTPase-activating prot 99.4 4.7E-12 1E-16 84.4 9.2 96 20-115 121-222 (669)
87 KOG4369 RTK signaling protein 99.4 5.4E-13 1.2E-17 96.1 4.3 119 4-122 759-887 (2131)
88 KOG0783 Uncharacterized conser 99.3 1.2E-12 2.7E-17 91.8 3.1 84 19-102 45-128 (1267)
89 KOG0506 Glutaminase (contains 99.3 9.1E-12 2E-16 82.7 6.2 93 22-115 502-595 (622)
90 KOG1710 MYND Zn-finger and ank 99.1 4.5E-10 9.7E-15 70.8 8.2 95 26-121 12-107 (396)
91 KOG0506 Glutaminase (contains 99.1 5.5E-11 1.2E-15 79.1 4.4 81 4-84 508-597 (622)
92 PF13606 Ank_3: Ankyrin repeat 99.1 1E-10 2.2E-15 49.8 3.3 26 26-51 2-27 (30)
93 KOG0782 Predicted diacylglycer 99.1 2.8E-10 6.1E-15 77.6 6.8 103 13-115 886-989 (1004)
94 PF13606 Ank_3: Ankyrin repeat 99.1 1.7E-10 3.7E-15 49.1 3.5 29 59-87 1-29 (30)
95 KOG0522 Ankyrin repeat protein 99.1 6.7E-10 1.5E-14 74.7 7.6 88 28-115 22-110 (560)
96 PF00023 Ank: Ankyrin repeat H 99.1 2.7E-10 5.9E-15 49.7 3.6 27 26-52 2-28 (33)
97 KOG0705 GTPase-activating prot 99.1 7.8E-10 1.7E-14 75.3 7.4 89 30-118 628-719 (749)
98 KOG4369 RTK signaling protein 99.0 2.1E-10 4.6E-15 83.3 3.7 113 3-115 858-981 (2131)
99 PF00023 Ank: Ankyrin repeat H 99.0 1.4E-09 3.1E-14 47.3 4.0 33 59-91 1-33 (33)
100 KOG0522 Ankyrin repeat protein 98.8 9.4E-09 2E-13 69.4 6.0 77 5-82 23-110 (560)
101 KOG0783 Uncharacterized conser 98.8 2.8E-09 6.1E-14 75.5 3.7 75 44-118 36-111 (1267)
102 KOG2384 Major histocompatibili 98.8 2.9E-08 6.4E-13 59.2 6.0 70 16-86 2-72 (223)
103 KOG0818 GTPase-activating prot 98.7 7.4E-08 1.6E-12 65.0 6.9 68 13-81 153-221 (669)
104 KOG0521 Putative GTPase activa 98.7 3.7E-08 7.9E-13 70.7 5.1 85 24-109 654-738 (785)
105 KOG0511 Ankyrin repeat protein 98.6 5.4E-07 1.2E-11 59.2 8.0 73 28-101 38-110 (516)
106 KOG0705 GTPase-activating prot 98.6 1.5E-07 3.3E-12 64.5 5.7 66 22-88 657-722 (749)
107 KOG0782 Predicted diacylglycer 98.5 3.8E-07 8.2E-12 62.8 5.5 93 30-123 870-964 (1004)
108 KOG0511 Ankyrin repeat protein 98.5 4.2E-07 9.1E-12 59.7 5.5 58 61-118 37-94 (516)
109 KOG0520 Uncharacterized conser 98.5 2.3E-07 5E-12 67.1 4.6 112 2-115 574-702 (975)
110 KOG2384 Major histocompatibili 98.4 1.1E-06 2.5E-11 52.6 6.1 66 55-120 7-74 (223)
111 KOG3609 Receptor-activated Ca2 98.3 3.5E-06 7.5E-11 60.2 6.8 91 17-115 53-153 (822)
112 KOG0521 Putative GTPase activa 98.3 7.5E-07 1.6E-11 64.2 3.0 78 1-79 655-741 (785)
113 KOG0520 Uncharacterized conser 98.3 8.6E-07 1.9E-11 64.3 3.3 93 21-115 569-663 (975)
114 KOG2505 Ankyrin repeat protein 97.8 5.2E-05 1.1E-09 51.7 5.4 63 39-101 404-471 (591)
115 KOG3609 Receptor-activated Ca2 97.7 7.2E-05 1.6E-09 53.8 4.7 81 2-87 62-158 (822)
116 smart00248 ANK ankyrin repeats 97.6 0.00015 3.2E-09 29.2 3.6 25 26-50 2-26 (30)
117 smart00248 ANK ankyrin repeats 97.6 0.00014 3E-09 29.4 3.3 24 61-84 3-26 (30)
118 KOG2505 Ankyrin repeat protein 97.5 0.00025 5.4E-09 48.5 4.9 46 22-68 426-471 (591)
119 PF06128 Shigella_OspC: Shigel 94.9 0.33 7.3E-06 30.7 7.1 93 26-118 179-279 (284)
120 PF11929 DUF3447: Domain of un 94.5 0.13 2.8E-06 26.5 4.1 47 28-82 8-54 (76)
121 PF11929 DUF3447: Domain of un 92.2 0.48 1E-05 24.4 4.0 49 61-116 7-55 (76)
122 PF06128 Shigella_OspC: Shigel 92.0 0.56 1.2E-05 29.8 4.7 51 36-86 227-280 (284)
123 PF03158 DUF249: Multigene fam 87.9 1.6 3.5E-05 26.8 4.2 45 64-114 147-191 (192)
124 PF03158 DUF249: Multigene fam 86.3 4.2 9.1E-05 25.0 5.3 47 30-80 50-96 (192)
125 KOG1595 CCCH-type Zn-finger pr 73.6 0.61 1.3E-05 33.0 -1.1 73 24-96 56-129 (528)
126 KOG1709 Guanidinoacetate methy 50.0 22 0.00047 22.9 2.6 40 46-86 2-41 (271)
127 KOG1709 Guanidinoacetate methy 48.3 28 0.0006 22.4 2.8 39 14-52 3-41 (271)
128 KOG3836 HLH transcription fact 45.0 7.2 0.00016 28.5 0.0 37 45-82 415-451 (605)
129 KOG4591 Uncharacterized conser 42.2 28 0.00061 22.0 2.2 44 60-103 222-270 (280)
130 KOG3836 HLH transcription fact 33.7 19 0.0004 26.5 0.6 38 13-50 416-453 (605)
131 PF05952 ComX: Bacillus compet 23.1 49 0.0011 16.2 0.9 9 107-115 4-12 (57)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=6.2e-32 Score=156.94 Aligned_cols=125 Identities=21% Similarity=0.139 Sum_probs=101.1
Q ss_pred CCcchHHHHHHH--------hh--hcCCCCccccCCchhHHHHHhcCCHHHHHHHHHh-cCCCcccccccCCChhhhhhh
Q 044402 1 MGNTAFHESLFI--------IN--RVTKWKTKDWNENIPLYFATSNTYIRGVCFLLEL-NGHSAIEHNIKTLYPIHLACK 69 (127)
Q Consensus 1 ~g~~~lh~a~~~--------l~--~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~t~l~~a~~ 69 (127)
+|+||||+||+. ++ .+.++|.+|..||||||+|+..|+.++|+-|+.+ +++++ ..+..|.|+||+|+.
T Consensus 37 D~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advn-a~tn~G~T~LHyAag 115 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVN-ATTNGGQTCLHYAAG 115 (226)
T ss_pred cCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcc-eecCCCcceehhhhc
Confidence 478888888877 33 3456777888888888888888888888888887 67764 777888888888888
Q ss_pred cCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhccccccccccc
Q 044402 70 NGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKISETNISMDKVV 126 (127)
Q Consensus 70 ~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 126 (127)
.|..+++++|++.|+.++++|..|.||||-|+.-|..+++++|+..+......|++.
T Consensus 116 K~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G 172 (226)
T KOG4412|consen 116 KGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYG 172 (226)
T ss_pred CChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccC
Confidence 888888888888888888888888888888888888888888887766666666654
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.4e-29 Score=147.25 Aligned_cols=121 Identities=18% Similarity=0.220 Sum_probs=111.5
Q ss_pred CCcchHHHHHHH---------hhh-cCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhc
Q 044402 1 MGNTAFHESLFI---------INR-VTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKN 70 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~-~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~ 70 (127)
.|+||||.|++. +.+ ++++|..+..|+||||||+..++.++.++|+++|+.+. .+|..++||||-|+..
T Consensus 71 aGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~-~kD~~~qtplHRAAav 149 (226)
T KOG4412|consen 71 AGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIR-IKDKQGQTPLHRAAAV 149 (226)
T ss_pred cCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCc-ccccccCchhHHHHhc
Confidence 489999999998 344 78999999999999999999999999999999999986 8999999999999999
Q ss_pred CchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccccc
Q 044402 71 GHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNISM 122 (127)
Q Consensus 71 ~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~ 122 (127)
|..+++++|+..|+.++.+|..|+||||.|...|+.+....|+++ .++.+..
T Consensus 150 Gklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~ed 202 (226)
T KOG4412|consen 150 GKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDRED 202 (226)
T ss_pred cchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHHhccceeecc
Confidence 999999999999999999999999999999999999999999988 5554443
No 3
>PHA02791 ankyrin-like protein; Provisional
Probab=99.94 E-value=7.7e-26 Score=143.86 Aligned_cols=115 Identities=19% Similarity=0.191 Sum_probs=65.0
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCc-hhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNEN-IPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~-t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
|+||||+|+.. +..+++++.++..|+ ||||+|+..++.+++++|++.++... ....|.||||+|+..|
T Consensus 94 G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~--d~~~g~TpLh~Aa~~g 171 (284)
T PHA02791 94 GNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF--DLAILLSCIHITIKNG 171 (284)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccc--ccccCccHHHHHHHcC
Confidence 44555555544 233444544444442 45555555555555555555433221 1123566666666666
Q ss_pred chHHHHHHHhccCCCCcccCCCCcH-HHHHHhcCcHHHHHHHHHh-ccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNI-LHFVVKNGHVNMVKAIIKI-SET 118 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~-l~~a~~~~~~~~~~~Ll~~-~~~ 118 (127)
+.+++++|++.|++++.++..|.|| ||+|+..|+.+++++|+++ .++
T Consensus 172 ~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~i 220 (284)
T PHA02791 172 HVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINI 220 (284)
T ss_pred CHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 6777777776666666666666655 6777777777777777666 443
No 4
>PHA02791 ankyrin-like protein; Provisional
Probab=99.93 E-value=3e-25 Score=141.18 Aligned_cols=111 Identities=16% Similarity=0.174 Sum_probs=69.8
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCC-ChhhhhhhcC
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTL-YPIHLACKNG 71 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~-t~l~~a~~~~ 71 (127)
|.||||.|+.. +..|++++.+|..|.||||+|+..++.+++++|++.+++.. .++..|+ ||||+|+..|
T Consensus 61 ~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin-~~~~~g~~TpL~~Aa~~g 139 (284)
T PHA02791 61 NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM-FYGKTGWKTSFYHAVMLN 139 (284)
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC-ccCCCCCcHHHHHHHHcC
Confidence 45666666654 34556666666666667777666666666666666666654 3444443 5666666666
Q ss_pred chHHHHHHHhccCCCCccc-CCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 72 HVKVMVEMLKKQHCPMFVT-NSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+.+++++|++.+.+. .+ ..|.||||+|+..|+.+++++|+++
T Consensus 140 ~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~ 182 (284)
T PHA02791 140 DVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDY 182 (284)
T ss_pred CHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHC
Confidence 666666666654332 12 2356777777777777777777766
No 5
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.93 E-value=1.3e-24 Score=145.25 Aligned_cols=117 Identities=19% Similarity=0.298 Sum_probs=91.9
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.||||+|+.. +..|++++.++..|.||||+|+..++.+++++|++.|+++. .++..|+||||+|+..|+
T Consensus 102 g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~TpL~~A~~~g~ 180 (413)
T PHA02875 102 GMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLD-IEDCCGCTPLIIAMAKGD 180 (413)
T ss_pred CCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC-CCCCCCCCHHHHHHHcCC
Confidence 67888888776 45677888888888888888888888888888888887775 677778888888888888
Q ss_pred hHHHHHHHhccCCCCcccCCC-CcHHHHHHhcCcHHHHHHHHHh-cccc
Q 044402 73 VKVMVEMLKKQHCPMFVTNSG-YNILHFVVKNGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~~~~-~t~l~~a~~~~~~~~~~~Ll~~-~~~~ 119 (127)
.+++++|++.|++++..+..| .||+++|+..|+.+++++|+++ ++++
T Consensus 181 ~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n 229 (413)
T PHA02875 181 IAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCN 229 (413)
T ss_pred HHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcc
Confidence 888888888888887777665 4677778888888888888877 5544
No 6
>PHA02741 hypothetical protein; Provisional
Probab=99.93 E-value=2e-24 Score=128.83 Aligned_cols=114 Identities=15% Similarity=0.166 Sum_probs=102.5
Q ss_pred CCcchHHHHHHH--------hh-------hcCCCCccccCCchhHHHHHhcCC----HHHHHHHHHhcCCCcccccc-cC
Q 044402 1 MGNTAFHESLFI--------IN-------RVTKWKTKDWNENIPLYFATSNTY----IRGVCFLLELNGHSAIEHNI-KT 60 (127)
Q Consensus 1 ~g~~~lh~a~~~--------l~-------~~~~~~~~d~~g~t~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~~-~~ 60 (127)
.|.||||+|++. +. .+++++.+|..|.||||+|+..++ .+++++|++.|+++. .++. .|
T Consensus 20 ~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin-~~~~~~g 98 (169)
T PHA02741 20 EGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADIN-AQEMLEG 98 (169)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCC-CCCcCCC
Confidence 478999999987 21 146788999999999999999998 588999999999986 5664 89
Q ss_pred CChhhhhhhcCchHHHHHHHh-ccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 61 LYPIHLACKNGHVKVMVEMLK-KQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 61 ~t~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+||||+|+..++.+++++|+. .|++++.++..|+|||++|...++.+++++|++.
T Consensus 99 ~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~ 154 (169)
T PHA02741 99 DTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREI 154 (169)
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHH
Confidence 999999999999999999997 5999999999999999999999999999999977
No 7
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.92 E-value=2.1e-24 Score=144.30 Aligned_cols=92 Identities=18% Similarity=0.265 Sum_probs=58.7
Q ss_pred ccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHh
Q 044402 23 DWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVK 102 (127)
Q Consensus 23 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 102 (127)
+..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+.
T Consensus 99 ~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~-~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~ 177 (413)
T PHA02875 99 YKDGMTPLHLATILKKLDIMKLLIARGADPD-IPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMA 177 (413)
T ss_pred cCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence 3445666666666666666666666666654 455566666666666666666666666666666666666666666666
Q ss_pred cCcHHHHHHHHHh
Q 044402 103 NGHVNMVKAIIKI 115 (127)
Q Consensus 103 ~~~~~~~~~Ll~~ 115 (127)
.|+.+++++|+++
T Consensus 178 ~g~~eiv~~Ll~~ 190 (413)
T PHA02875 178 KGDIAICKMLLDS 190 (413)
T ss_pred cCCHHHHHHHHhC
Confidence 6666666666665
No 8
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.92 E-value=6.1e-25 Score=147.38 Aligned_cols=120 Identities=23% Similarity=0.270 Sum_probs=89.4
Q ss_pred CcchHHHHHHH---------hhhcCCCCccc-cCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKD-WNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d-~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
|.|+||+||-+ +.+|+++|... .-+.||||+|+++|+..++.+|+++|+++. ..|..|.+|+|+|+..+
T Consensus 78 g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt-~~D~~G~~~lHla~~~~ 156 (600)
T KOG0509|consen 78 GVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPT-LKDKQGLTPLHLAAQFG 156 (600)
T ss_pred CccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCc-eecCCCCcHHHHHHHhC
Confidence 66777877776 66777777777 567778888888888888888888888775 67777888888888888
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNISM 122 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~ 122 (127)
+.-.+-||+.+|++++.+|.+|+|||+||+..|....+..|++- +.+....
T Consensus 157 ~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d 208 (600)
T KOG0509|consen 157 HTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTD 208 (600)
T ss_pred chHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccc
Confidence 88888888877777788888888888888877776656666655 4444443
No 9
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.92 E-value=6.8e-24 Score=130.29 Aligned_cols=119 Identities=13% Similarity=0.040 Sum_probs=96.8
Q ss_pred CCcchHHHHHHH-----------hhhcCCCCccc-cCCchhHHHHHhc---CCHHHHHHHHHhcCCCcccccccCCChhh
Q 044402 1 MGNTAFHESLFI-----------INRVTKWKTKD-WNENIPLYFATSN---TYIRGVCFLLELNGHSAIEHNIKTLYPIH 65 (127)
Q Consensus 1 ~g~~~lh~a~~~-----------l~~~~~~~~~d-~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~t~l~ 65 (127)
.|.||||.|+.. +..|++++.++ ..|.||||+|+.. ++.+++++|+++|+++. ..+..|.||||
T Consensus 50 ~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin-~~d~~G~TpLh 128 (209)
T PHA02859 50 LYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSIT-EEDEDGKNLLH 128 (209)
T ss_pred cCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCC-CcCCCCCCHHH
Confidence 478999988752 56788888886 4789999988754 46889999999999886 78888999999
Q ss_pred hhhh--cCchHHHHHHHhccCCCCcccCCCCcHHHH-HHhcCcHHHHHHHHHh-ccccc
Q 044402 66 LACK--NGHVKVMVEMLKKQHCPMFVTNSGYNILHF-VVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 66 ~a~~--~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~-a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
+|+. .++.+++++|++.|++++.+|..|.||||. ++..++.+++++|+++ .+++.
T Consensus 129 ~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~ 187 (209)
T PHA02859 129 MYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINE 187 (209)
T ss_pred HHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCC
Confidence 8875 467899999999999999999999999985 5667888999999988 44443
No 10
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.92 E-value=5.1e-24 Score=126.66 Aligned_cols=117 Identities=7% Similarity=-0.033 Sum_probs=102.1
Q ss_pred CcchHHHHHHH-------------hhhcCCCCccccCCchhHHHHHhcCCHHH---HHHHHHhcCCCccccc-ccCCChh
Q 044402 2 GNTAFHESLFI-------------INRVTKWKTKDWNENIPLYFATSNTYIRG---VCFLLELNGHSAIEHN-IKTLYPI 64 (127)
Q Consensus 2 g~~~lh~a~~~-------------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~---~~~ll~~~~~~~~~~~-~~~~t~l 64 (127)
+.++||.|++. +..+..++.+|..|+||||+|+..++.+. +++|++.|+++. .++ ..|.|||
T Consensus 20 ~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin-~~d~~~g~TpL 98 (166)
T PHA02743 20 EQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADIN-ARELGTGNTLL 98 (166)
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCC-CCCCCCCCcHH
Confidence 56789999876 12456788899999999999999998654 799999999986 566 5899999
Q ss_pred hhhhhcCchHHHHHHHh-ccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccc
Q 044402 65 HLACKNGHVKVMVEMLK-KQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 65 ~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~ 119 (127)
|+|+..++.+++++|+. .|++++.++..|.||||+|+..++.+++++|+++ .+.+
T Consensus 99 h~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~ 155 (166)
T PHA02743 99 HIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCD 155 (166)
T ss_pred HHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999995 7999999999999999999999999999999988 4443
No 11
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.92 E-value=1.9e-24 Score=127.18 Aligned_cols=114 Identities=7% Similarity=0.006 Sum_probs=98.9
Q ss_pred CCcchHHHHHHH-----h--hhcC--C-----CCccccCCchhHHHHHhcCCH---HHHHHHHHhcCCCccccc-ccCCC
Q 044402 1 MGNTAFHESLFI-----I--NRVT--K-----WKTKDWNENIPLYFATSNTYI---RGVCFLLELNGHSAIEHN-IKTLY 62 (127)
Q Consensus 1 ~g~~~lh~a~~~-----l--~~~~--~-----~~~~d~~g~t~l~~a~~~~~~---~~~~~ll~~~~~~~~~~~-~~~~t 62 (127)
+|.||||+|++. + ..+. + +..+|..|.||||+|+..++. +++++|++.|+++. .++ ..|+|
T Consensus 16 ~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin-~~~~~~g~T 94 (154)
T PHA02736 16 EGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADIN-GKERVFGNT 94 (154)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcc-ccCCCCCCc
Confidence 489999999999 1 1222 1 224688999999999999986 46889999999986 566 58999
Q ss_pred hhhhhhhcCchHHHHHHHh-ccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 63 PIHLACKNGHVKVMVEMLK-KQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 63 ~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
|||+|+..++.+++++|+. .|++++.++..|.||||+|+..|+.+++++|++.
T Consensus 95 ~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ 148 (154)
T PHA02736 95 PLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAK 148 (154)
T ss_pred HHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999999999997 4899999999999999999999999999999987
No 12
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.92 E-value=8.6e-25 Score=146.65 Aligned_cols=113 Identities=21% Similarity=0.225 Sum_probs=105.9
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.||||+|+++ +.+|++++.+|.+|.+|+|.|+.+++...+-|++.++.+++ .+|..|.|||++|+.+|+
T Consensus 112 ~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d-~~D~~grTpLmwAaykg~ 190 (600)
T KOG0509|consen 112 GSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADID-LRDNNGRTPLMWAAYKGF 190 (600)
T ss_pred CCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCC-CcCCCCCCHHHHHHHhcc
Confidence 57999999999 67899999999999999999999999999999999999886 899999999999999999
Q ss_pred hHHHHHHHhccCCCCccc-CCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 73 VKVMVEMLKKQHCPMFVT-NSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
...++.|+..|+++...| .+|.||||||+..|+..+++.|++.
T Consensus 191 ~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g 234 (600)
T KOG0509|consen 191 ALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEG 234 (600)
T ss_pred cHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhc
Confidence 998999999999998888 9999999999999999999955544
No 13
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.91 E-value=1.2e-23 Score=142.78 Aligned_cols=98 Identities=20% Similarity=0.218 Sum_probs=51.5
Q ss_pred CCCCccccC-CchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCc
Q 044402 17 TKWKTKDWN-ENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYN 95 (127)
Q Consensus 17 ~~~~~~d~~-g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t 95 (127)
++++.+|.. |.||||+|+..++.+++++|++.|+++. ..+..|.||||.|+..++.+++++|++.|++++.+|..|.|
T Consensus 158 adin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n-~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~T 236 (477)
T PHA02878 158 ADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVN-IPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNT 236 (477)
T ss_pred CCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 344444444 5555555555555555555555555543 44445555555555555555555555555555555555555
Q ss_pred HHHHHHhc-CcHHHHHHHHHh
Q 044402 96 ILHFVVKN-GHVNMVKAIIKI 115 (127)
Q Consensus 96 ~l~~a~~~-~~~~~~~~Ll~~ 115 (127)
|||+|+.. ++.+++++|+++
T Consensus 237 pLh~A~~~~~~~~iv~~Ll~~ 257 (477)
T PHA02878 237 PLHISVGYCKDYDILKLLLEH 257 (477)
T ss_pred HHHHHHHhcCCHHHHHHHHHc
Confidence 55555543 345555555555
No 14
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.91 E-value=1.2e-23 Score=142.79 Aligned_cols=117 Identities=19% Similarity=0.149 Sum_probs=104.2
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhc-C
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKN-G 71 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~-~ 71 (127)
|.||||+|+.. +..|++++..|..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+.. +
T Consensus 168 g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in-~~d~~g~TpLh~A~~~~~ 246 (477)
T PHA02878 168 GNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD-ARDKCGNTPLHISVGYCK 246 (477)
T ss_pred CCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHhcC
Confidence 89999999987 56789999999999999999999999999999999999986 7888999999999975 7
Q ss_pred chHHHHHHHhccCCCCcccC-CCCcHHHHHHhcCcHHHHHHHHHh-cccccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTN-SGYNILHFVVKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
+.+++++|++.|++++.++. .|.||||+| .+..+++++|+++ .+++..
T Consensus 247 ~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~ 296 (477)
T PHA02878 247 DYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSL 296 (477)
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCc
Confidence 89999999999999988875 799999999 4678899999988 555543
No 15
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.91 E-value=2.2e-23 Score=140.12 Aligned_cols=100 Identities=21% Similarity=0.263 Sum_probs=88.9
Q ss_pred cCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCc
Q 044402 16 VTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYN 95 (127)
Q Consensus 16 ~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t 95 (127)
|++++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..++.+++++|++.|++++..+..|.|
T Consensus 114 g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n-~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~t 192 (434)
T PHA02874 114 GIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVN-IEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGES 192 (434)
T ss_pred cCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCC
Confidence 45677788889999999999999999999999998885 67888999999999999999999999999999988999999
Q ss_pred HHHHHHhcCcHHHHHHHHHhc
Q 044402 96 ILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 96 ~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
|||+|+..|+.+++++|++.+
T Consensus 193 pL~~A~~~g~~~iv~~Ll~~g 213 (434)
T PHA02874 193 PLHNAAEYGDYACIKLLIDHG 213 (434)
T ss_pred HHHHHHHcCCHHHHHHHHhCC
Confidence 999999999999999999883
No 16
>PHA03095 ankyrin-like protein; Provisional
Probab=99.91 E-value=2.4e-23 Score=141.11 Aligned_cols=117 Identities=18% Similarity=0.097 Sum_probs=106.4
Q ss_pred CCcchHHHHHHH-----------hhhcCCCCccccCCchhHHHHHhcCCH--HHHHHHHHhcCCCcccccccCCChhhhh
Q 044402 1 MGNTAFHESLFI-----------INRVTKWKTKDWNENIPLYFATSNTYI--RGVCFLLELNGHSAIEHNIKTLYPIHLA 67 (127)
Q Consensus 1 ~g~~~lh~a~~~-----------l~~~~~~~~~d~~g~t~l~~a~~~~~~--~~~~~ll~~~~~~~~~~~~~~~t~l~~a 67 (127)
.|.||||.|+.. +..|++++.+|..|.||||+|+..++. ..+..+++.|.+++ .++..|+||||+|
T Consensus 186 ~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din-~~d~~g~TpLh~A 264 (471)
T PHA03095 186 RFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISIN-ARNRYGQTPLHYA 264 (471)
T ss_pred CCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCC-CcCCCCCCHHHHH
Confidence 478999998865 567899999999999999999999975 57888999999986 7889999999999
Q ss_pred hhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccc
Q 044402 68 CKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SET 118 (127)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~ 118 (127)
+..|+.+++++|++.|++++.++..|.|||++|+..|+.++++.|++. ++.
T Consensus 265 ~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~ 316 (471)
T PHA03095 265 AVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSA 316 (471)
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCH
Confidence 999999999999999999999999999999999999999999999987 554
No 17
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.90 E-value=8.2e-24 Score=126.84 Aligned_cols=122 Identities=18% Similarity=0.169 Sum_probs=109.8
Q ss_pred CcchHHHHHHH-------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchH
Q 044402 2 GNTAFHESLFI-------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVK 74 (127)
Q Consensus 2 g~~~lh~a~~~-------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 74 (127)
+++|+.+++.+ ++....+|..|+.|.|||.+|+.+|++++|++|++.|+++. .......++|.+|++.|..+
T Consensus 129 p~s~~slsVhql~L~~~~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~-~lgk~resALsLAt~ggytd 207 (296)
T KOG0502|consen 129 PWSPLSLSVHQLHLDVVDLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPD-ALGKYRESALSLATRGGYTD 207 (296)
T ss_pred cCChhhHHHHHHHHHHHHHHhhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChh-hhhhhhhhhHhHHhcCChHH
Confidence 67888888877 33456799999999999999999999999999999999996 66677889999999999999
Q ss_pred HHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccccccc
Q 044402 75 VMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNISMDK 124 (127)
Q Consensus 75 ~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~ 124 (127)
++++|+.++.+++..|.+|-|||.+|++.++.+|++.|++. .++.+..|.
T Consensus 208 iV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~ds 258 (296)
T KOG0502|consen 208 IVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDS 258 (296)
T ss_pred HHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCccccccc
Confidence 99999999999999999999999999999999999999998 666666554
No 18
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.90 E-value=8.8e-23 Score=137.27 Aligned_cols=116 Identities=12% Similarity=0.130 Sum_probs=105.4
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCc------------------
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSA------------------ 53 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~------------------ 53 (127)
.|.||||.|+.. +..|++++..+..|.|||++|+..++.+++++|++.|++..
T Consensus 34 ~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~ 113 (434)
T PHA02874 34 ETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDC 113 (434)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHC
Confidence 378999999988 56789999999999999999999999999999998876431
Q ss_pred ----ccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 54 ----IEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 54 ----~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
...+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.+
T Consensus 114 g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g 180 (434)
T PHA02874 114 GIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKG 180 (434)
T ss_pred cCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC
Confidence 145678999999999999999999999999999999999999999999999999999999884
No 19
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.90 E-value=5.5e-23 Score=139.64 Aligned_cols=113 Identities=19% Similarity=0.272 Sum_probs=64.9
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCC------chhHHHHHhcCC--HHHHHHHHHhcCCCcccccccCCChh
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNE------NIPLYFATSNTY--IRGVCFLLELNGHSAIEHNIKTLYPI 64 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g------~t~l~~a~~~~~--~~~~~~ll~~~~~~~~~~~~~~~t~l 64 (127)
|.||||.|+.. +..|++++..+..| .||||+|+..++ .+++++|++.|+++. .++..|.|||
T Consensus 176 g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din-~~d~~g~TpL 254 (480)
T PHA03100 176 GYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPIN-IKDVYGFTPL 254 (480)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCC-CCCCCCCCHH
Confidence 45555555544 33445555555555 555555555555 555555555555553 4555566666
Q ss_pred hhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 65 HLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 65 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
|+|+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|+++
T Consensus 255 ~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ 305 (480)
T PHA03100 255 HYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNN 305 (480)
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhc
Confidence 666666666666666666666666666666666666666666666666655
No 20
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.90 E-value=3e-23 Score=142.69 Aligned_cols=118 Identities=26% Similarity=0.330 Sum_probs=108.0
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHH-hcCCCcccccccCCChhhhhhhc
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLE-LNGHSAIEHNIKTLYPIHLACKN 70 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~~t~l~~a~~~ 70 (127)
+|.||||+|++. +..|++++.++.++.||||.|+.+|++.+++.||+ .+....+..|..|.||||+|++.
T Consensus 272 dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~ 351 (929)
T KOG0510|consen 272 DGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKS 351 (929)
T ss_pred cCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhc
Confidence 589999999999 56789999999999999999999999999999999 66666567888999999999999
Q ss_pred CchHHHHHHHhccCCCC---cccCCCCcHHHHHHhcCcHHHHHHHHHhccc
Q 044402 71 GHVKVMVEMLKKQHCPM---FVTNSGYNILHFVVKNGHVNMVKAIIKISET 118 (127)
Q Consensus 71 ~~~~~~~~l~~~~~~~~---~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~ 118 (127)
||..+++.|++.|+... ..|.+|.||||.|+..|+..+++.|+.+|..
T Consensus 352 gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~ 402 (929)
T KOG0510|consen 352 GHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGAD 402 (929)
T ss_pred CHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCc
Confidence 99999999999999886 4599999999999999999999999999443
No 21
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.90 E-value=8.1e-23 Score=146.00 Aligned_cols=108 Identities=20% Similarity=0.215 Sum_probs=77.6
Q ss_pred hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhh---------------------------
Q 044402 13 INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIH--------------------------- 65 (127)
Q Consensus 13 l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~--------------------------- 65 (127)
+..|++++..|..|+||||+|+..|+.+++++|++.|++++ .++..|+||||
T Consensus 545 l~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin-~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~ 623 (823)
T PLN03192 545 LKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVH-IRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAG 623 (823)
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCC-CcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCc
Confidence 33455555555556666666666666666666666555553 45555555555
Q ss_pred ----hhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccccc
Q 044402 66 ----LACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 66 ----~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
.|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++ .+++..
T Consensus 624 ~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~ 684 (823)
T PLN03192 624 DLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKA 684 (823)
T ss_pred hHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCC
Confidence 56666677778888899999999999999999999999999999999998 555443
No 22
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.90 E-value=3.1e-22 Score=122.97 Aligned_cols=116 Identities=12% Similarity=0.058 Sum_probs=98.9
Q ss_pred CCcchHHHHHHH--------hhhcCCCCccccCCchhHHHHHhcC--CHHHHHHHHHhcCCCccccc-ccCCChhhhhhh
Q 044402 1 MGNTAFHESLFI--------INRVTKWKTKDWNENIPLYFATSNT--YIRGVCFLLELNGHSAIEHN-IKTLYPIHLACK 69 (127)
Q Consensus 1 ~g~~~lh~a~~~--------l~~~~~~~~~d~~g~t~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~-~~~~t~l~~a~~ 69 (127)
++.||||.|+.. +.. .++..|..|.||||+|+..+ +.+++++|++.|+++. ..+ ..|+||||+|+.
T Consensus 20 ~~~~pL~~A~~~~~~~~vk~Li~--~~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn-~~~~~~g~TpLh~a~~ 96 (209)
T PHA02859 20 RYCNPLFYYVEKDDIEGVKKWIK--FVNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVN-FKTRDNNLSALHHYLS 96 (209)
T ss_pred ccCcHHHHHHHhCcHHHHHHHHH--hhhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCC-ccCCCCCCCHHHHHHH
Confidence 367999999998 332 36778999999999999865 8999999999999996 454 579999999876
Q ss_pred c---CchHHHHHHHhccCCCCcccCCCCcHHHHHHh--cCcHHHHHHHHHh-cccc
Q 044402 70 N---GHVKVMVEMLKKQHCPMFVTNSGYNILHFVVK--NGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 70 ~---~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~--~~~~~~~~~Ll~~-~~~~ 119 (127)
. ++.+++++|++.|++++.++..|.||||+|+. .++.+++++|++. .+++
T Consensus 97 ~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin 152 (209)
T PHA02859 97 FNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFL 152 (209)
T ss_pred hCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcc
Confidence 4 47999999999999999999999999999876 4689999999988 4443
No 23
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.90 E-value=1.3e-22 Score=138.27 Aligned_cols=114 Identities=17% Similarity=0.262 Sum_probs=82.6
Q ss_pred CcchHHHHHHH-----------hhhcCCCCc-cccCCchhHHHHHhcC----CHHHHHHHHHhcCCCcc-----------
Q 044402 2 GNTAFHESLFI-----------INRVTKWKT-KDWNENIPLYFATSNT----YIRGVCFLLELNGHSAI----------- 54 (127)
Q Consensus 2 g~~~lh~a~~~-----------l~~~~~~~~-~d~~g~t~l~~a~~~~----~~~~~~~ll~~~~~~~~----------- 54 (127)
|+||||+|+.. +..|++++. .+..|.||||+|+..+ +.+++++|++.|+++..
T Consensus 145 g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~ 224 (494)
T PHA02989 145 GYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLES 224 (494)
T ss_pred CCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHH
Confidence 66777766532 445666666 4566777777665543 66777777777665321
Q ss_pred --------------------------cccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHH
Q 044402 55 --------------------------EHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNM 108 (127)
Q Consensus 55 --------------------------~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 108 (127)
.++..|+||||+|+..++.+++++|++.|++++.++..|+||||+|+..++.++
T Consensus 225 ~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~i 304 (494)
T PHA02989 225 FLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDM 304 (494)
T ss_pred HHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHH
Confidence 234458888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHh
Q 044402 109 VKAIIKI 115 (127)
Q Consensus 109 ~~~Ll~~ 115 (127)
++.|++.
T Consensus 305 v~~LL~~ 311 (494)
T PHA02989 305 LNRILQL 311 (494)
T ss_pred HHHHHhc
Confidence 8888876
No 24
>PHA02798 ankyrin-like protein; Provisional
Probab=99.90 E-value=1.1e-22 Score=138.55 Aligned_cols=118 Identities=15% Similarity=0.073 Sum_probs=83.3
Q ss_pred CCcchHHHHHHH------------hhhcCCCCccccCCchhHHHHHhcCC---HHHHHHHHHhcCCCccc----------
Q 044402 1 MGNTAFHESLFI------------INRVTKWKTKDWNENIPLYFATSNTY---IRGVCFLLELNGHSAIE---------- 55 (127)
Q Consensus 1 ~g~~~lh~a~~~------------l~~~~~~~~~d~~g~t~l~~a~~~~~---~~~~~~ll~~~~~~~~~---------- 55 (127)
.|.||||+|+.. +..|++++.+|..|.||||+|+..++ .+++++|++.|+++...
T Consensus 108 ~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh 187 (489)
T PHA02798 108 DGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLH 187 (489)
T ss_pred CcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHH
Confidence 478888888753 45678888888888888888888877 78888888777654211
Q ss_pred ------------------------------------------------------------------ccccCCChhhhhhh
Q 044402 56 ------------------------------------------------------------------HNIKTLYPIHLACK 69 (127)
Q Consensus 56 ------------------------------------------------------------------~~~~~~t~l~~a~~ 69 (127)
++..|+||||+|+.
T Consensus 188 ~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~ 267 (489)
T PHA02798 188 CYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVS 267 (489)
T ss_pred HHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHH
Confidence 22346677777777
Q ss_pred cCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccc
Q 044402 70 NGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SET 118 (127)
Q Consensus 70 ~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~ 118 (127)
.++.+++++|++.|++++.++..|+|||++|+..++.++++.|++. ++.
T Consensus 268 ~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~ 317 (489)
T PHA02798 268 HNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNK 317 (489)
T ss_pred cCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCH
Confidence 7777777777777777777777777777777777777777777665 443
No 25
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.89 E-value=1.4e-22 Score=141.85 Aligned_cols=118 Identities=17% Similarity=0.161 Sum_probs=102.1
Q ss_pred CCcchHHHHHHH-----------hhhcCCCCccccCCchhHHHHHhcCC--HHHHHHHHHhcCCCcccccccCCChhhhh
Q 044402 1 MGNTAFHESLFI-----------INRVTKWKTKDWNENIPLYFATSNTY--IRGVCFLLELNGHSAIEHNIKTLYPIHLA 67 (127)
Q Consensus 1 ~g~~~lh~a~~~-----------l~~~~~~~~~d~~g~t~l~~a~~~~~--~~~~~~ll~~~~~~~~~~~~~~~t~l~~a 67 (127)
.|.||||.|+.. +..|++++.+|..|.||||+|+..++ .+++++|++.|+++. .++..|+||||.|
T Consensus 176 ~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN-~kD~~G~TPLh~A 254 (764)
T PHA02716 176 TGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMD-MKCVNGMSPIMTY 254 (764)
T ss_pred CCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHH
Confidence 388999987532 56789999999999999999999995 589999999999996 7889999999865
Q ss_pred -------------------------------------hhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHh--cCcHHH
Q 044402 68 -------------------------------------CKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVK--NGHVNM 108 (127)
Q Consensus 68 -------------------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~--~~~~~~ 108 (127)
+..|+.+++++|++.|++++.+|..|+||||+|+. .++.++
T Consensus 255 i~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eI 334 (764)
T PHA02716 255 IINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDI 334 (764)
T ss_pred HHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchH
Confidence 34578899999999999999999999999999764 467899
Q ss_pred HHHHHHh-cccc
Q 044402 109 VKAIIKI-SETN 119 (127)
Q Consensus 109 ~~~Ll~~-~~~~ 119 (127)
+++|++. .+++
T Consensus 335 VklLLe~GADIN 346 (764)
T PHA02716 335 IKLLHEYGNDLN 346 (764)
T ss_pred HHHHHHcCCCCc
Confidence 9999988 4443
No 26
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.89 E-value=1.7e-22 Score=137.25 Aligned_cols=117 Identities=20% Similarity=0.269 Sum_probs=94.6
Q ss_pred CcchHHH-----HHHH---------hhhcCCCCccccCCchhHHHHH--hcCCHHHHHHHHHhcCCCcccccccCCChhh
Q 044402 2 GNTAFHE-----SLFI---------INRVTKWKTKDWNENIPLYFAT--SNTYIRGVCFLLELNGHSAIEHNIKTLYPIH 65 (127)
Q Consensus 2 g~~~lh~-----a~~~---------l~~~~~~~~~d~~g~t~l~~a~--~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~ 65 (127)
|.||||. |+.. +..|++++..|..|.||||+|+ ..++.+++++|++.|+++. ..+..|.||||
T Consensus 68 ~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~-~~~~~g~t~L~ 146 (480)
T PHA03100 68 NSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVN-IKNSDGENLLH 146 (480)
T ss_pred CcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCC-ccCCCCCcHHH
Confidence 5678888 7666 4567778888888888888888 8888888888888888775 67777888888
Q ss_pred hhhhcC--chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccc
Q 044402 66 LACKNG--HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 66 ~a~~~~--~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~ 119 (127)
+|+..+ +.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++ .+++
T Consensus 147 ~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~ 203 (480)
T PHA03100 147 LYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADIN 203 (480)
T ss_pred HHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCcc
Confidence 888888 88888888888888888888888888888888888888888877 4443
No 27
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.89 E-value=1.9e-22 Score=141.92 Aligned_cols=119 Identities=12% Similarity=0.181 Sum_probs=102.9
Q ss_pred CcchHHHHHHH----------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 2 GNTAFHESLFI----------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 2 g~~~lh~a~~~----------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
|.||||+|+.. +..|++++.+|..|.||||+|+..++.+++++|++.|+++. ..+..+.||||+|+..+
T Consensus 341 g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~-~~~~~g~T~Lh~A~~~~ 419 (682)
T PHA02876 341 YITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIE-ALSQKIGTALHFALCGT 419 (682)
T ss_pred CCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc-ccCCCCCchHHHHHHcC
Confidence 67888888864 56788999999999999999999999999999999999886 67788899999998765
Q ss_pred c-hHHHHHHHhccCCCCcccCCCCcHHHHHHhcC-cHHHHHHHHHh-cccccc
Q 044402 72 H-VKVMVEMLKKQHCPMFVTNSGYNILHFVVKNG-HVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 72 ~-~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~~Ll~~-~~~~~~ 121 (127)
. ..++++|++.|++++.+|..|+||||+|+..+ ..+++++|++. ++++..
T Consensus 420 ~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~ 472 (682)
T PHA02876 420 NPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAI 472 (682)
T ss_pred CHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCC
Confidence 4 56789999999999999999999999999877 68999999988 555543
No 28
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.89 E-value=3e-22 Score=127.85 Aligned_cols=107 Identities=10% Similarity=0.034 Sum_probs=91.1
Q ss_pred Ccch-HHHHHHH---------hhhcCCCCccc----cCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhh
Q 044402 2 GNTA-FHESLFI---------INRVTKWKTKD----WNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLA 67 (127)
Q Consensus 2 g~~~-lh~a~~~---------l~~~~~~~~~d----~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a 67 (127)
|+++ ||.|+.. +..|++++.++ ..|.||||+|+..++.+++++|+++|+++....+..|.||||.|
T Consensus 32 ~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~A 111 (300)
T PHA02884 32 CIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYIS 111 (300)
T ss_pred CCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHH
Confidence 4555 5555553 67889999874 58999999999999999999999999999622356799999999
Q ss_pred hhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHH
Q 044402 68 CKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNM 108 (127)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 108 (127)
+..++.+++++|+..|++++.++..|.||+|+|+..+..++
T Consensus 112 a~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~ 152 (300)
T PHA02884 112 VLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFL 152 (300)
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhH
Confidence 99999999999999999999999999999999998654333
No 29
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.89 E-value=1.7e-22 Score=141.31 Aligned_cols=119 Identities=15% Similarity=0.075 Sum_probs=103.3
Q ss_pred CCcchHHHHHHH-----------hhhcCCCCccccCCchhHHHH------------------------------------
Q 044402 1 MGNTAFHESLFI-----------INRVTKWKTKDWNENIPLYFA------------------------------------ 33 (127)
Q Consensus 1 ~g~~~lh~a~~~-----------l~~~~~~~~~d~~g~t~l~~a------------------------------------ 33 (127)
.|.||||+|+.. +..|++++.+|..|.||||+|
T Consensus 211 ~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~ 290 (764)
T PHA02716 211 HLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYIT 290 (764)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHH
Confidence 489999999875 567999999999999999975
Q ss_pred -HhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhh--cCchHHHHHHHhccCCCCcccCCCCcHHHHHHh--------
Q 044402 34 -TSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACK--NGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVK-------- 102 (127)
Q Consensus 34 -~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~--~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~-------- 102 (127)
+..++.+++++|++.|+++. .++..|+||||+|+. .++.+++++|++.|++++.+|..|+||||+|+.
T Consensus 291 AA~~g~leiVklLLe~GAdIN-~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~l 369 (764)
T PHA02716 291 LARNIDISVVYSFLQPGVKLH-YKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNIL 369 (764)
T ss_pred HHHcCCHHHHHHHHhCCCcee-ccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccc
Confidence 45578899999999999986 789999999999764 468999999999999999999999999999865
Q ss_pred ------cCcHHHHHHHHHh-ccccc
Q 044402 103 ------NGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 103 ------~~~~~~~~~Ll~~-~~~~~ 120 (127)
.++.+++++|+++ .+++.
T Consensus 370 d~~~~~~~~~eVVklLL~~GADIn~ 394 (764)
T PHA02716 370 DPETDNDIRLDVIQCLISLGADITA 394 (764)
T ss_pred cccccccChHHHHHHHHHCCCCCCC
Confidence 3689999999998 55444
No 30
>PHA02946 ankyin-like protein; Provisional
Probab=99.89 E-value=2.5e-22 Score=135.22 Aligned_cols=52 Identities=19% Similarity=0.310 Sum_probs=31.4
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCC--HHHHHHHHHhcCCCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTY--IRGVCFLLELNGHSA 53 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~--~~~~~~ll~~~~~~~ 53 (127)
|.||||+|+.. +..|++++.+|..|+||||+|+..++ .+++++|++.|+++.
T Consensus 72 G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin 134 (446)
T PHA02946 72 GNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKIN 134 (446)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcc
Confidence 56666666655 44556666666666666666655442 555666666665543
No 31
>PHA03095 ankyrin-like protein; Provisional
Probab=99.89 E-value=5.6e-22 Score=134.44 Aligned_cols=118 Identities=17% Similarity=0.195 Sum_probs=103.4
Q ss_pred CCcchHHHHHHH------------hhhcCCCCccccCCchhHHHHHhcC-CHHHHHHHHHhcCCCcccccccCCChhhhh
Q 044402 1 MGNTAFHESLFI------------INRVTKWKTKDWNENIPLYFATSNT-YIRGVCFLLELNGHSAIEHNIKTLYPIHLA 67 (127)
Q Consensus 1 ~g~~~lh~a~~~------------l~~~~~~~~~d~~g~t~l~~a~~~~-~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a 67 (127)
.|.||||.|+.. +..|++++.+|..|.||||+|+..+ +.+++++|++.|+++. ..+..|.||||+|
T Consensus 46 ~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in-~~~~~g~tpLh~a 124 (471)
T PHA03095 46 YGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVN-AKDKVGRTPLHVY 124 (471)
T ss_pred CCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCC-CCCCCCCCHHHHH
Confidence 378999999874 5678999999999999999999999 5999999999999986 7888899999999
Q ss_pred h--hcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcC--cHHHHHHHHHh-cccc
Q 044402 68 C--KNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNG--HVNMVKAIIKI-SETN 119 (127)
Q Consensus 68 ~--~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~Ll~~-~~~~ 119 (127)
+ ..++.+++++|++.|++++..+..|.||||+++..+ ..+++++|++. .+..
T Consensus 125 ~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~ 181 (471)
T PHA03095 125 LSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVY 181 (471)
T ss_pred hhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCc
Confidence 9 557889999999999999999999999999988766 58899999988 4433
No 32
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.89 E-value=1.1e-22 Score=133.25 Aligned_cols=114 Identities=19% Similarity=0.245 Sum_probs=101.1
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.+||-.|+.- +.+|+.+|.....+.|||..||.-|++++++||+++++++. ..++.|.|+|++||..|+
T Consensus 84 gappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~-IanrhGhTcLmIa~ykGh 162 (615)
T KOG0508|consen 84 GAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPE-IANRHGHTCLMIACYKGH 162 (615)
T ss_pred CCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCc-ccccCCCeeEEeeeccCc
Confidence 55665544333 56788899888888899999999999999999999999996 899999999999999999
Q ss_pred hHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 73 VKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
.+++++|++.|++++.++..|+|+||.+++.|+.+++++|+.++
T Consensus 163 ~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~g 206 (615)
T KOG0508|consen 163 VDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHG 206 (615)
T ss_pred hHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999873
No 33
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.88 E-value=2.1e-21 Score=104.44 Aligned_cols=86 Identities=24% Similarity=0.374 Sum_probs=78.0
Q ss_pred HHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHH
Q 044402 30 LYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMV 109 (127)
Q Consensus 30 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 109 (127)
||+|++.++.+++++|++.+.+.. . |.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~-~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 75 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADIN-L----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIV 75 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTT-S----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCC-C----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHH
Confidence 799999999999999999887764 2 88999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh-ccccc
Q 044402 110 KAIIKI-SETNI 120 (127)
Q Consensus 110 ~~Ll~~-~~~~~ 120 (127)
++|+++ .+++.
T Consensus 76 ~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 76 KLLLEHGADVNI 87 (89)
T ss_dssp HHHHHTTT-TTS
T ss_pred HHHHHcCCCCCC
Confidence 999998 55543
No 34
>PHA02946 ankyin-like protein; Provisional
Probab=99.87 E-value=3.7e-21 Score=129.55 Aligned_cols=112 Identities=17% Similarity=0.128 Sum_probs=96.6
Q ss_pred cchHHHHHHH-----------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 3 NTAFHESLFI-----------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 3 ~~~lh~a~~~-----------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.++||.++.. +..|++++.+|..|.||||+|+..++.+++++|+++|+++. .++..|.||||+|+..+
T Consensus 38 ~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin-~~d~~g~TpLh~A~~~~ 116 (446)
T PHA02946 38 YHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPN-ACDKQHKTPLYYLSGTD 116 (446)
T ss_pred ChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCC-CCCCCCCCHHHHHHHcC
Confidence 4788877642 66899999999999999999999999999999999999996 78999999999998765
Q ss_pred --chHHHHHHHhccCCCCc-ccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 72 --HVKVMVEMLKKQHCPMF-VTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 72 --~~~~~~~l~~~~~~~~~-~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
..+++++|++.|++++. .+..|.|||+ |+..++.+++++|++.+
T Consensus 117 ~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~g 163 (446)
T PHA02946 117 DEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIG 163 (446)
T ss_pred CchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhcc
Confidence 47889999999999974 5788889987 55667888888888773
No 35
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.87 E-value=5.8e-22 Score=141.90 Aligned_cols=116 Identities=22% Similarity=0.264 Sum_probs=105.2
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.+++|.|... +.+|++.+.++..|.||||.|+.+|+.++|++|+++|++.. .++..|+||||.||..|+
T Consensus 507 ~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~-ak~~~G~TPLH~Aa~~G~ 585 (1143)
T KOG4177|consen 507 GLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVN-AKDKLGYTPLHQAAQQGH 585 (1143)
T ss_pred ccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCcccc-ccCCCCCChhhHHHHcCh
Confidence 44566666555 56788999999999999999999999999999999999996 678999999999999999
Q ss_pred hHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhccc
Q 044402 73 VKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKISET 118 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~ 118 (127)
.+++.+|+++|++++..+.+|.|||++|+..|+.++++.|+..+..
T Consensus 586 ~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 586 NDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred HHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence 9999999999999999999999999999999999999999987444
No 36
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.87 E-value=2.8e-21 Score=136.10 Aligned_cols=117 Identities=15% Similarity=0.244 Sum_probs=90.8
Q ss_pred CcchHHHHHHH----------hhhcCCCCccccCCchhHHHHHhcC-CHHHHHHHHHhcCCCcccccccCCChhhhhhhc
Q 044402 2 GNTAFHESLFI----------INRVTKWKTKDWNENIPLYFATSNT-YIRGVCFLLELNGHSAIEHNIKTLYPIHLACKN 70 (127)
Q Consensus 2 g~~~lh~a~~~----------l~~~~~~~~~d~~g~t~l~~a~~~~-~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~ 70 (127)
|.||||+|+.. +..|++++.+|..|.||||+|+..| ..+.+++|+..|+++. ..+..|.||||+|+..
T Consensus 273 g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin-~~d~~g~TpLh~A~~~ 351 (682)
T PHA02876 273 KNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVN-AADRLYITPLHQASTL 351 (682)
T ss_pred CCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCC-CcccCCCcHHHHHHHh
Confidence 77888888865 4567788888888888888888888 4778888888888775 6777788888888774
Q ss_pred -CchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccc
Q 044402 71 -GHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 71 -~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~ 119 (127)
++.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++. .+++
T Consensus 352 ~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~ 402 (682)
T PHA02876 352 DRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIE 402 (682)
T ss_pred CCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc
Confidence 467777788888888888888888888888888888888888876 4433
No 37
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.87 E-value=4.2e-21 Score=130.95 Aligned_cols=103 Identities=16% Similarity=0.138 Sum_probs=56.9
Q ss_pred hhhcCCC-CccccCCchhHHHHHhc--CCHHHHHHHHHhcCCCcccccccCCChhhhhhhc----CchHHHHHHHhccCC
Q 044402 13 INRVTKW-KTKDWNENIPLYFATSN--TYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKN----GHVKVMVEMLKKQHC 85 (127)
Q Consensus 13 l~~~~~~-~~~d~~g~t~l~~a~~~--~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~----~~~~~~~~l~~~~~~ 85 (127)
+..|+++ +.+|..|.||||+|+.. ++.+++++|++.|+++....+..|.||||+++.. ++.+++++|++.|++
T Consensus 131 l~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~ 210 (494)
T PHA02989 131 LSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVN 210 (494)
T ss_pred HHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCC
Confidence 3445555 55556666666655432 3556666666666655422344556666655443 255666666665554
Q ss_pred CCc--------------------------------------ccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 86 PMF--------------------------------------VTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 86 ~~~--------------------------------------~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
++. +|..|+||||+|+..|+.+++++|+++
T Consensus 211 vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~ 278 (494)
T PHA02989 211 IETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKL 278 (494)
T ss_pred ccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHc
Confidence 422 233466666666666666666666665
No 38
>PHA02795 ankyrin-like protein; Provisional
Probab=99.87 E-value=4.1e-21 Score=127.29 Aligned_cols=93 Identities=12% Similarity=0.152 Sum_probs=69.8
Q ss_pred CchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcC-
Q 044402 26 ENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNG- 104 (127)
Q Consensus 26 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~- 104 (127)
+.+++|.|+..++.+++++|+++|+++. .++..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|
T Consensus 188 ~~t~l~~a~~~~~~eIve~LIs~GADIN-~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 188 QYTRGFLVDEPTVLEIYKLCIPYIEDIN-QLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred ccchhHHHHhcCHHHHHHHHHhCcCCcC-cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 4556666666666677777777776664 67777888888888888888888888888888888888888888888777
Q ss_pred -------cHHHHHHHHHh-cccc
Q 044402 105 -------HVNMVKAIIKI-SETN 119 (127)
Q Consensus 105 -------~~~~~~~Ll~~-~~~~ 119 (127)
+.+++++|+++ ++.+
T Consensus 267 ~~~~~~~~~eIvelLL~~gadI~ 289 (437)
T PHA02795 267 VIARRETHLKILEILLREPLSID 289 (437)
T ss_pred cccccccHHHHHHHHHhCCCCCC
Confidence 35788888877 4443
No 39
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.86 E-value=5.3e-22 Score=126.44 Aligned_cols=118 Identities=19% Similarity=0.233 Sum_probs=85.3
Q ss_pred CCcchHHHHHHH--------hh-h-cCCCCccccCCchhHHHHHhcC-----CHHHHHHHHHhcCCCcccccccCCChhh
Q 044402 1 MGNTAFHESLFI--------IN-R-VTKWKTKDWNENIPLYFATSNT-----YIRGVCFLLELNGHSAIEHNIKTLYPIH 65 (127)
Q Consensus 1 ~g~~~lh~a~~~--------l~-~-~~~~~~~d~~g~t~l~~a~~~~-----~~~~~~~ll~~~~~~~~~~~~~~~t~l~ 65 (127)
.|+|+||+++.. |+ . .++++.+++-|.||++.++... +.++|..|+..|.... +....|+|+|+
T Consensus 267 NGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNa-KAsQ~gQTALM 345 (452)
T KOG0514|consen 267 NGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNA-KASQHGQTALM 345 (452)
T ss_pred CCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcch-hhhhhcchhhh
Confidence 377888887777 22 2 2567777777777777765433 4566777776655433 55667888888
Q ss_pred hhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhcccc
Q 044402 66 LACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKISETN 119 (127)
Q Consensus 66 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~ 119 (127)
+|+.+|++++++.|+..|++++.+|.+|.|+|+.|+.+|+.|+++.|+..+..+
T Consensus 346 LAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd 399 (452)
T KOG0514|consen 346 LAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCD 399 (452)
T ss_pred hhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCccc
Confidence 888888888888888888888888888888888888888888888888764433
No 40
>PHA02798 ankyrin-like protein; Provisional
Probab=99.86 E-value=4.7e-21 Score=130.60 Aligned_cols=106 Identities=19% Similarity=0.307 Sum_probs=76.3
Q ss_pred hhhcCCCCccccCCchhHHHHHhc-----CCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC---chHHHHHHHhccC
Q 044402 13 INRVTKWKTKDWNENIPLYFATSN-----TYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG---HVKVMVEMLKKQH 84 (127)
Q Consensus 13 l~~~~~~~~~d~~g~t~l~~a~~~-----~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~---~~~~~~~l~~~~~ 84 (127)
+..|++++.+|..|.||||.++.+ ++.+++++|++.|++++ .++..|.||||+|+..+ +.+++++|++.|+
T Consensus 58 l~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN-~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Ga 136 (489)
T PHA02798 58 INLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADIN-KKNSDGETPLYCLLSNGYINNLEILLFMIENGA 136 (489)
T ss_pred HHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCC-CCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCC
Confidence 556777777777777777777654 45677777777777775 66777777777777654 5677777777777
Q ss_pred CCCcccCCCCcHHHHHHhcCc---HHHHHHHHHh-cccc
Q 044402 85 CPMFVTNSGYNILHFVVKNGH---VNMVKAIIKI-SETN 119 (127)
Q Consensus 85 ~~~~~~~~~~t~l~~a~~~~~---~~~~~~Ll~~-~~~~ 119 (127)
+++.++..|.||||+|+..++ .+++++|+++ .+++
T Consensus 137 dvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin 175 (489)
T PHA02798 137 DTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDIN 175 (489)
T ss_pred CccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcc
Confidence 777777777777777777766 7777777776 4443
No 41
>PHA02795 ankyrin-like protein; Provisional
Probab=99.86 E-value=1.5e-20 Score=124.59 Aligned_cols=118 Identities=9% Similarity=-0.018 Sum_probs=102.7
Q ss_pred CCcchHHHHHHH-----------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccc-----cccCCChh
Q 044402 1 MGNTAFHESLFI-----------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEH-----NIKTLYPI 64 (127)
Q Consensus 1 ~g~~~lh~a~~~-----------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~-----~~~~~t~l 64 (127)
+++|+||.++.. +..|++++.++ +.||+|+|+..++.+++++|+++|++..+.. +..+.+++
T Consensus 115 ~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~~--~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l 192 (437)
T PHA02795 115 SVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKIE--CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRG 192 (437)
T ss_pred cccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchh
Confidence 368999999994 77899998854 4899999999999999999999998543222 13477899
Q ss_pred hhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 65 HLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 65 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
|.+...++.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++ .+++.
T Consensus 193 ~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~ 249 (437)
T PHA02795 193 FLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNA 249 (437)
T ss_pred HHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999 44443
No 42
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.85 E-value=1.3e-21 Score=128.27 Aligned_cols=111 Identities=16% Similarity=0.215 Sum_probs=103.2
Q ss_pred cchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCch
Q 044402 3 NTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHV 73 (127)
Q Consensus 3 ~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~ 73 (127)
.|||..||.. +.+++++++.|+.|.|+||+||..||.+++++|++.|++++ .++..|+|+||.|+..|++
T Consensus 118 StPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn-~ks~kGNTALH~caEsG~v 196 (615)
T KOG0508|consen 118 STPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVN-AKSYKGNTALHDCAESGSV 196 (615)
T ss_pred CccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcc-hhcccCchHHHhhhhcccH
Confidence 4899999887 67889999999999999999999999999999999999996 7899999999999999999
Q ss_pred HHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 74 KVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 74 ~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+++++|+..|+-++. |.+|.|||..|+..|+.+++++|++.
T Consensus 197 divq~Ll~~ga~i~~-d~~GmtPL~~Aa~tG~~~iVe~L~~~ 237 (615)
T KOG0508|consen 197 DIVQLLLKHGAKIDV-DGHGMTPLLLAAVTGHTDIVERLLQC 237 (615)
T ss_pred HHHHHHHhCCceeee-cCCCCchHHHHhhhcchHHHHHHhcC
Confidence 999999999877765 66799999999999999999999953
No 43
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.84 E-value=3.7e-20 Score=127.70 Aligned_cols=100 Identities=19% Similarity=0.215 Sum_probs=66.8
Q ss_pred hcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcc--------------cccccCCChhhhhhhcCchHHHHHHH
Q 044402 15 RVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAI--------------EHNIKTLYPIHLACKNGHVKVMVEML 80 (127)
Q Consensus 15 ~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~--------------~~~~~~~t~l~~a~~~~~~~~~~~l~ 80 (127)
++..++..+..+.+|||.|+..|++++++..|+++..... ..|.+|.||||+|++.|++++++.|+
T Consensus 214 r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll 293 (929)
T KOG0510|consen 214 RQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLL 293 (929)
T ss_pred hhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHH
Confidence 3455666666666666666666666666666666544322 23556677777777777777777777
Q ss_pred hccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHH
Q 044402 81 KKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIK 114 (127)
Q Consensus 81 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~ 114 (127)
..|++++.++.++.||||.|+.+|+...++.|++
T Consensus 294 ~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~ 327 (929)
T KOG0510|consen 294 GFGASINSKNKDEESPLHFAAIYGRINTVERLLQ 327 (929)
T ss_pred HcCCcccccCCCCCCchHHHHHcccHHHHHHHHh
Confidence 7777777777777777777777777777777776
No 44
>PHA02741 hypothetical protein; Provisional
Probab=99.83 E-value=1e-19 Score=108.58 Aligned_cols=96 Identities=8% Similarity=0.005 Sum_probs=85.1
Q ss_pred CCccccCCchhHHHHHhcCCHHHHHHHHHh------cCCCcccccccCCChhhhhhhcCc----hHHHHHHHhccCCCCc
Q 044402 19 WKTKDWNENIPLYFATSNTYIRGVCFLLEL------NGHSAIEHNIKTLYPIHLACKNGH----VKVMVEMLKKQHCPMF 88 (127)
Q Consensus 19 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~------~~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~l~~~~~~~~~ 88 (127)
++.+|..|.||||+|+..|+.++++.|+.. +.+.. .++..|+||||+|+..|+ .+++++|++.|++++.
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in-~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~ 92 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALN-ATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINA 92 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhh-ccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC
Confidence 456788999999999999999999998653 35553 678889999999999998 5899999999999999
Q ss_pred ccC-CCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 89 VTN-SGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 89 ~~~-~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
++. .|+||||+|+..++.+++++|++.
T Consensus 93 ~~~~~g~TpLh~A~~~~~~~iv~~Ll~~ 120 (169)
T PHA02741 93 QEMLEGDTALHLAAHRRDHDLAEWLCCQ 120 (169)
T ss_pred CCcCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 885 999999999999999999999974
No 45
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.83 E-value=3e-20 Score=111.67 Aligned_cols=120 Identities=20% Similarity=0.145 Sum_probs=108.1
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+|+|||.+|+.+ +..|++++..-+...++|..|++.|..++|+.|+..+.+++ .-+.+|.|||-+|++.+
T Consensus 159 ~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVN-vyDwNGgTpLlyAvrgn 237 (296)
T KOG0502|consen 159 FGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVN-VYDWNGGTPLLYAVRGN 237 (296)
T ss_pred cCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcc-eeccCCCceeeeeecCC
Confidence 589999999998 66789999999999999999999999999999999999996 88999999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNISM 122 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~ 122 (127)
+.++++.|+..|++++..+..|.+++..|+..|+. +++.+++. ....++.
T Consensus 238 hvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~ 288 (296)
T KOG0502|consen 238 HVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQD 288 (296)
T ss_pred hHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999998 55555554 5444443
No 46
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.83 E-value=9.4e-20 Score=105.92 Aligned_cols=97 Identities=22% Similarity=0.191 Sum_probs=88.5
Q ss_pred CCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHH
Q 044402 18 KWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNIL 97 (127)
Q Consensus 18 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l 97 (127)
.+|.+|.+|.||||-|+.+||.++++.|+..|+++. .+...||||||.||.-++.+++.+|++.|++++.......|||
T Consensus 89 ~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~-a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpL 167 (228)
T KOG0512|consen 89 HVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKE-AKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPL 167 (228)
T ss_pred cccccccccccHHHHHHhcCchHHHHHHHHccCCcc-cccccCccchhhhhcccchhHHHHHHhccCcccccccccchhh
Confidence 499999999999999999999999999999999996 7888999999999999999999999999999999999999999
Q ss_pred HHHHhcCcHH-HHHHHHHh
Q 044402 98 HFVVKNGHVN-MVKAIIKI 115 (127)
Q Consensus 98 ~~a~~~~~~~-~~~~Ll~~ 115 (127)
|+|+...... .+++|+..
T Consensus 168 hlaa~~rn~r~t~~~Ll~d 186 (228)
T KOG0512|consen 168 HLAAGNRNSRDTLELLLHD 186 (228)
T ss_pred HHhhcccchHHHHHHHhhc
Confidence 9999777644 46666644
No 47
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.83 E-value=7.4e-20 Score=116.78 Aligned_cols=117 Identities=15% Similarity=0.147 Sum_probs=105.8
Q ss_pred CcchHHHHHHH-------------hhhcCCCCccc-cCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhh
Q 044402 2 GNTAFHESLFI-------------INRVTKWKTKD-WNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLA 67 (127)
Q Consensus 2 g~~~lh~a~~~-------------l~~~~~~~~~d-~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a 67 (127)
|+||+++|+.- |-+-.++|.+. ..|.|+|+.|..+|+.++++.||..|++++ .+|..|.|+|+.|
T Consensus 302 GYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVN-iQDdDGSTALMCA 380 (452)
T KOG0514|consen 302 GYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVN-IQDDDGSTALMCA 380 (452)
T ss_pred cccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCc-cccCCccHHHhhh
Confidence 78999998876 55668899976 559999999999999999999999999996 8999999999999
Q ss_pred hhcCchHHHHHHHhc-cCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhcccc
Q 044402 68 CKNGHVKVMVEMLKK-QHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKISETN 119 (127)
Q Consensus 68 ~~~~~~~~~~~l~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~ 119 (127)
|.+||+|++++|+.. ++++.+.|.+|.|+|.+|...|+.|+.-.|..+-++.
T Consensus 381 ~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~~n~~ 433 (452)
T KOG0514|consen 381 AEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAHMNIK 433 (452)
T ss_pred hhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHHHHHHHhh
Confidence 999999999999886 7888999999999999999999999999998764433
No 48
>PHA02917 ankyrin-like protein; Provisional
Probab=99.83 E-value=1.6e-19 Score=126.23 Aligned_cols=116 Identities=17% Similarity=0.165 Sum_probs=94.4
Q ss_pred CCcchHHHHHHH------------hhhcCCCCccccCCchhHHHHHhcCCHH----HHHHHHHhcCCCcccccccCCChh
Q 044402 1 MGNTAFHESLFI------------INRVTKWKTKDWNENIPLYFATSNTYIR----GVCFLLELNGHSAIEHNIKTLYPI 64 (127)
Q Consensus 1 ~g~~~lh~a~~~------------l~~~~~~~~~d~~g~t~l~~a~~~~~~~----~~~~ll~~~~~~~~~~~~~~~t~l 64 (127)
+|.||||+|+.. +..|++++.++..|+||||+|+..++.+ +++.|++.+.... ..+ ..+++
T Consensus 31 ~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n-~~~--~~~~~ 107 (661)
T PHA02917 31 FKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSN-IND--FNIFS 107 (661)
T ss_pred CCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCC-CCC--cchHH
Confidence 489999997444 6788999999999999999999999855 4567777543322 222 23677
Q ss_pred hhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHH--HhcCcHHHHHHHHHh-cccc
Q 044402 65 HLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFV--VKNGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 65 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a--~~~~~~~~~~~Ll~~-~~~~ 119 (127)
+.|+..++.+++++|++.|++++.+|..|+|||+.+ +..|+.+++++|+++ .+++
T Consensus 108 ~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn 165 (661)
T PHA02917 108 YMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL 165 (661)
T ss_pred HHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc
Confidence 889999999999999999999999999999999954 457899999999999 5554
No 49
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.82 E-value=7.8e-19 Score=99.23 Aligned_cols=112 Identities=28% Similarity=0.364 Sum_probs=92.0
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+|.||||.|+.. +..+.+.+.++..|.+|+++|+..+..++++++++.+.... ..+..+.||+|+|+..+
T Consensus 6 ~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~-~~~~~~~~~l~~a~~~~ 84 (126)
T cd00204 6 DGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVN-ARDKDGNTPLHLAARNG 84 (126)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcC
Confidence 478888888887 34455567788888889999988888888888888887664 56677888999998888
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHH
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAII 113 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll 113 (127)
+.+++++|+..+.+.+..+..+.||++.|...++.+++++|+
T Consensus 85 ~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 85 NLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred cHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 888999988888888888888889999888888888888764
No 50
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.82 E-value=7.1e-20 Score=131.39 Aligned_cols=120 Identities=20% Similarity=0.222 Sum_probs=91.7
Q ss_pred CcchHHHHHHH----------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHh-----------------------
Q 044402 2 GNTAFHESLFI----------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLEL----------------------- 48 (127)
Q Consensus 2 g~~~lh~a~~~----------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~----------------------- 48 (127)
|+||+|.|+.. +..+.+++.....|.||||.|+..||.+.+..+++.
T Consensus 440 G~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~ 519 (1143)
T KOG4177|consen 440 GYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDT 519 (1143)
T ss_pred CCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhh
Confidence 55666665554 334455555556666666666666666555555554
Q ss_pred ----------cCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cc
Q 044402 49 ----------NGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SE 117 (127)
Q Consensus 49 ----------~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~ 117 (127)
|.+.. .+...+.||||.|+..|++++|++|++.|++++.+++.|+||||.|+..|+.++++.|+++ .+
T Consensus 520 v~~~~~l~~~ga~v~-~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~ 598 (1143)
T KOG4177|consen 520 VKVAKILLEHGANVD-LRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGAS 598 (1143)
T ss_pred HHHHHHHhhcCCcee-hhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCC
Confidence 44453 5777899999999999999999999999999999999999999999999999999999999 55
Q ss_pred ccccc
Q 044402 118 TNISM 122 (127)
Q Consensus 118 ~~~~~ 122 (127)
++..+
T Consensus 599 vna~d 603 (1143)
T KOG4177|consen 599 VNAAD 603 (1143)
T ss_pred CCccc
Confidence 55443
No 51
>PHA02730 ankyrin-like protein; Provisional
Probab=99.82 E-value=3.2e-19 Score=123.41 Aligned_cols=117 Identities=9% Similarity=0.021 Sum_probs=94.0
Q ss_pred CCcchHHHHHHH-------------hhhcC--CCCccccCCchhHHH---HHhcC---------CHHHHHHHHHhcCCCc
Q 044402 1 MGNTAFHESLFI-------------INRVT--KWKTKDWNENIPLYF---ATSNT---------YIRGVCFLLELNGHSA 53 (127)
Q Consensus 1 ~g~~~lh~a~~~-------------l~~~~--~~~~~d~~g~t~l~~---a~~~~---------~~~~~~~ll~~~~~~~ 53 (127)
.|.||||.|+.. +.+|+ +++.+|..|.||||. +...+ ..+++++|+++|+++.
T Consensus 377 ~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADIN 456 (672)
T PHA02730 377 DNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDID 456 (672)
T ss_pred CCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchh
Confidence 478999988653 44665 588889999999984 33222 2356899999999885
Q ss_pred ccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccC-CCCcHHHHHHhc--CcHHHHHHHHHh-ccc
Q 044402 54 IEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTN-SGYNILHFVVKN--GHVNMVKAIIKI-SET 118 (127)
Q Consensus 54 ~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~~t~l~~a~~~--~~~~~~~~Ll~~-~~~ 118 (127)
.++..|+||||+|+..++.+++++|++.|++++.++. .|.||+|+|+.. ++.++++.|+++ +..
T Consensus 457 -akD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i 524 (672)
T PHA02730 457 -MIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTL 524 (672)
T ss_pred -ccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCH
Confidence 7888999999999999999999999999999999886 589999999874 688999999988 443
No 52
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.81 E-value=1.3e-19 Score=113.19 Aligned_cols=103 Identities=22% Similarity=0.293 Sum_probs=88.6
Q ss_pred CCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcH
Q 044402 17 TKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNI 96 (127)
Q Consensus 17 ~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~ 96 (127)
-+.|.-|..|.+|||+||..||..+++.|++.|+.++ ..+....||||+|+.+||.++++.|+++.++++..+..|+||
T Consensus 25 hdln~gddhgfsplhwaakegh~aivemll~rgarvn-~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntp 103 (448)
T KOG0195|consen 25 HDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVN-STNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTP 103 (448)
T ss_pred cccccccccCcchhhhhhhcccHHHHHHHHhcccccc-cccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCc
Confidence 5678888899999999999999999999999998885 666677889999999999999999999999999999999999
Q ss_pred HHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 97 LHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 97 l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
||+||.-|+-.+++-|+.. ..+++
T Consensus 104 lhyacfwgydqiaedli~~ga~v~i 128 (448)
T KOG0195|consen 104 LHYACFWGYDQIAEDLISCGAAVNI 128 (448)
T ss_pred hhhhhhhcHHHHHHHHHhccceeee
Confidence 9999999988888888877 44443
No 53
>PHA02730 ankyrin-like protein; Provisional
Probab=99.81 E-value=4.2e-19 Score=122.84 Aligned_cols=115 Identities=14% Similarity=0.073 Sum_probs=87.1
Q ss_pred CCcchHHHHHHH------------hhhcCCCCccccCCchhHHHHHhcC--CHHHHHHHHHhcCCCcc-cccccCCChhh
Q 044402 1 MGNTAFHESLFI------------INRVTKWKTKDWNENIPLYFATSNT--YIRGVCFLLELNGHSAI-EHNIKTLYPIH 65 (127)
Q Consensus 1 ~g~~~lh~a~~~------------l~~~~~~~~~d~~g~t~l~~a~~~~--~~~~~~~ll~~~~~~~~-~~~~~~~t~l~ 65 (127)
.|+||||+|+.. +..|++++.+|..|.||||+|+..+ +.+++++|++.|++... ..+..+.+||+
T Consensus 40 ~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~ 119 (672)
T PHA02730 40 RGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFDLY 119 (672)
T ss_pred CCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCchHH
Confidence 478888888643 5678888888888888888888866 68888888888664421 34555778888
Q ss_pred hhhh--cCchHHHHHHHh-ccCCCCccc-----CCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 66 LACK--NGHVKVMVEMLK-KQHCPMFVT-----NSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 66 ~a~~--~~~~~~~~~l~~-~~~~~~~~~-----~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
.++. .++.+++++|+. .+++++... ..|-+|++++...+..+++++|+++
T Consensus 120 ~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~ 177 (672)
T PHA02730 120 SYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKS 177 (672)
T ss_pred HHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHc
Confidence 8777 788888888886 556664432 2678888888888888888888888
No 54
>PHA02917 ankyrin-like protein; Provisional
Probab=99.81 E-value=4.5e-19 Score=123.97 Aligned_cols=105 Identities=13% Similarity=0.096 Sum_probs=88.6
Q ss_pred hhhcCCCCccccCCchhHHHH--HhcCCHHHHHHHHHhcCCCccccc---c-----------cCCChhhhhhh-------
Q 044402 13 INRVTKWKTKDWNENIPLYFA--TSNTYIRGVCFLLELNGHSAIEHN---I-----------KTLYPIHLACK------- 69 (127)
Q Consensus 13 l~~~~~~~~~d~~g~t~l~~a--~~~~~~~~~~~ll~~~~~~~~~~~---~-----------~~~t~l~~a~~------- 69 (127)
+..|++++.+|..|+||||++ +..++.+++++|+++|+++. .++ . .+.||||+|+.
T Consensus 123 l~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn-~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~ 201 (661)
T PHA02917 123 VEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL-YEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSES 201 (661)
T ss_pred HHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc-ccccccccccccccccccccccHHHHHHhhcccccc
Confidence 557889999999999999954 45789999999999999885 222 2 23699999986
Q ss_pred ----cCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcH--HHHHHHHHhccc
Q 044402 70 ----NGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHV--NMVKAIIKISET 118 (127)
Q Consensus 70 ----~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~--~~~~~Ll~~~~~ 118 (127)
.++.+++++|++.|++++.+|.+|.||||+|+..|+. +++++|++.++.
T Consensus 202 ~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~g~d~ 256 (661)
T PHA02917 202 DTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMKGIDN 256 (661)
T ss_pred cccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHhCCcc
Confidence 4689999999999999999999999999999999984 799999864433
No 55
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.80 E-value=1e-18 Score=93.92 Aligned_cols=80 Identities=18% Similarity=0.203 Sum_probs=68.1
Q ss_pred HHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHH
Q 044402 6 FHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVM 76 (127)
Q Consensus 6 lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 76 (127)
||.|++. +..+.+++. |.||||+|+..++.+++++|++.|.++. .++..|+||||+|+..++.+++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~ 75 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADIN-SQDKNGNTALHYAAENGNLEIV 75 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT--BSTTSSBHHHHHHHTTHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhccccc-ccCCCCCCHHHHHHHcCCHHHH
Confidence 6778777 344555555 8899999999999999999999999986 7889999999999999999999
Q ss_pred HHHHhccCCCCccc
Q 044402 77 VEMLKKQHCPMFVT 90 (127)
Q Consensus 77 ~~l~~~~~~~~~~~ 90 (127)
++|++.|++++.+|
T Consensus 76 ~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 76 KLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHTTT-TTSS-
T ss_pred HHHHHcCCCCCCcC
Confidence 99999999988764
No 56
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.79 E-value=7.6e-19 Score=104.48 Aligned_cols=98 Identities=8% Similarity=-0.019 Sum_probs=85.3
Q ss_pred cCCCCccccCCchhHHHHHhcCCH----HHHHHHHHhcCCCcccccccCCChhhhhhhcCchHH---HHHHHhccCCCCc
Q 044402 16 VTKWKTKDWNENIPLYFATSNTYI----RGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKV---MVEMLKKQHCPMF 88 (127)
Q Consensus 16 ~~~~~~~d~~g~t~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~---~~~l~~~~~~~~~ 88 (127)
+++++..+..+.+++|+|+..++. +++++|.+.+.... ..+..|+||||+|+..|+.+. +++|++.|++++.
T Consensus 10 ~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~-~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~ 88 (166)
T PHA02743 10 NLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLH-RYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA 88 (166)
T ss_pred chHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhh-ccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence 456666788888999999999998 56667778887764 678899999999999988654 7999999999999
Q ss_pred cc-CCCCcHHHHHHhcCcHHHHHHHHH
Q 044402 89 VT-NSGYNILHFVVKNGHVNMVKAIIK 114 (127)
Q Consensus 89 ~~-~~~~t~l~~a~~~~~~~~~~~Ll~ 114 (127)
++ ..|.||||+|+..++.+++++|++
T Consensus 89 ~d~~~g~TpLh~A~~~g~~~iv~~Ll~ 115 (166)
T PHA02743 89 RELGTGNTLLHIAASTKNYELAEWLCR 115 (166)
T ss_pred CCCCCCCcHHHHHHHhCCHHHHHHHHh
Confidence 98 589999999999999999999995
No 57
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.79 E-value=2.3e-18 Score=110.11 Aligned_cols=99 Identities=13% Similarity=0.098 Sum_probs=86.3
Q ss_pred ccccCCchh-HHHHHhcCCHHHHHHHHHhcCCCcccc----cccCCChhhhhhhcCchHHHHHHHhccCCCCcc-cCCCC
Q 044402 21 TKDWNENIP-LYFATSNTYIRGVCFLLELNGHSAIEH----NIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFV-TNSGY 94 (127)
Q Consensus 21 ~~d~~g~t~-l~~a~~~~~~~~~~~ll~~~~~~~~~~----~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~-~~~~~ 94 (127)
.+|..|+++ |+.|+.+++.+++++|++.|+++. .. +..|.||||+|+..++.+++++|++.|++++.+ +..|.
T Consensus 27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN-~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~ 105 (300)
T PHA02884 27 KKNKICIANILYSSIKFHYTDIIDAILKLGADPE-APFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKI 105 (300)
T ss_pred ccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCcc-ccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCC
Confidence 577777765 666777789999999999999986 44 458999999999999999999999999999986 46899
Q ss_pred cHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 95 NILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 95 t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
||||+|+..++.+++++|++. .+++.
T Consensus 106 TpLh~Aa~~~~~eivklLL~~GAdin~ 132 (300)
T PHA02884 106 TPLYISVLHGCLKCLEILLSYGADINI 132 (300)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 999999999999999999998 55544
No 58
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.78 E-value=9e-19 Score=109.43 Aligned_cols=100 Identities=17% Similarity=0.181 Sum_probs=94.7
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|++|||+||.. +.+|+.+|..+...-||||.|+.+||.++++.|++..++++ ..+..|.||||+||.-|.
T Consensus 34 gfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvn-avnehgntplhyacfwgy 112 (448)
T KOG0195|consen 34 GFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVN-AVNEHGNTPLHYACFWGY 112 (448)
T ss_pred CcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccc-hhhccCCCchhhhhhhcH
Confidence 78999999988 78899999999989999999999999999999999999996 788999999999999999
Q ss_pred hHHHHHHHhccCCCCcccCCCCcHHHHHHh
Q 044402 73 VKVMVEMLKKQHCPMFVTNSGYNILHFVVK 102 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 102 (127)
..+++-|+..|+.+++.++.|.||+..|.-
T Consensus 113 dqiaedli~~ga~v~icnk~g~tpldkakp 142 (448)
T KOG0195|consen 113 DQIAEDLISCGAAVNICNKKGMTPLDKAKP 142 (448)
T ss_pred HHHHHHHHhccceeeecccCCCCchhhhch
Confidence 999999999999999999999999998764
No 59
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.78 E-value=2.1e-18 Score=123.65 Aligned_cols=103 Identities=14% Similarity=0.104 Sum_probs=87.4
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCC-------------------------------HH
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTY-------------------------------IR 40 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~-------------------------------~~ 40 (127)
.|+||||.|+.. +..|++++.+|..|.||||+|+..++ .+
T Consensus 557 ~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~ 636 (823)
T PLN03192 557 KGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLT 636 (823)
T ss_pred CCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHH
Confidence 489999999988 55689999999999999886655554 55
Q ss_pred HHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCC-CcHHHHHHhcC
Q 044402 41 GVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSG-YNILHFVVKNG 104 (127)
Q Consensus 41 ~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-~t~l~~a~~~~ 104 (127)
++++|+++|++++ .++..|+||||+|+..|+.+++++|++.|++++..+..| .||+.++....
T Consensus 637 ~v~~Ll~~Gadin-~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~~ 700 (823)
T PLN03192 637 AMKELLKQGLNVD-SEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELLQ 700 (823)
T ss_pred HHHHHHHCCCCCC-CCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHH
Confidence 5666777888885 788999999999999999999999999999999999888 89988775443
No 60
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.76 E-value=2.5e-18 Score=114.00 Aligned_cols=119 Identities=18% Similarity=0.253 Sum_probs=105.4
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCC--------------------
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGH-------------------- 51 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~-------------------- 51 (127)
+|.|+||.++.. +..+++++..|..|+||+|.|+.-+|..++++|++.|++
T Consensus 72 DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~ 151 (527)
T KOG0505|consen 72 DGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEAT 151 (527)
T ss_pred ccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcch
Confidence 588999998877 667899999999999999999999999999999998853
Q ss_pred --------------------------------------CcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCC
Q 044402 52 --------------------------------------SAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSG 93 (127)
Q Consensus 52 --------------------------------------~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~ 93 (127)
........|.|.||.|+..|..+++++|+..|.+++.+|.+|
T Consensus 152 ~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dg 231 (527)
T KOG0505|consen 152 LDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDG 231 (527)
T ss_pred hHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccC
Confidence 111333448999999999999999999999999999999999
Q ss_pred CcHHHHHHhcCcHHHHHHHHHh-cccc
Q 044402 94 YNILHFVVKNGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 94 ~t~l~~a~~~~~~~~~~~Ll~~-~~~~ 119 (127)
|||||.|+.=|..++++.|+++ ++.+
T Consensus 232 WtPlHAAA~Wg~~~~~elL~~~ga~~d 258 (527)
T KOG0505|consen 232 WTPLHAAAHWGQEDACELLVEHGADMD 258 (527)
T ss_pred CCcccHHHHhhhHhHHHHHHHhhcccc
Confidence 9999999999999999999998 5544
No 61
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.76 E-value=1.2e-18 Score=119.51 Aligned_cols=114 Identities=25% Similarity=0.349 Sum_probs=105.6
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+|+|+||.|+.+ +...+.+++.|..|.+|||+|+..|+.++++.++.++..++ .....+.||||.|+.+|
T Consensus 48 ~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~n-a~~~e~~tplhlaaqhg 126 (854)
T KOG0507|consen 48 SGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILN-AVNIENETPLHLAAQHG 126 (854)
T ss_pred cchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCC-cccccCcCccchhhhhc
Confidence 589999999998 33456788999999999999999999999999999997665 78889999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
|.+++.+|+.+|+++-..++.+.|++..|++.|..+++..|++.
T Consensus 127 h~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~ 170 (854)
T KOG0507|consen 127 HLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQK 170 (854)
T ss_pred chHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhh
Confidence 99999999999999999999999999999999999999999976
No 62
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.75 E-value=3.7e-18 Score=121.40 Aligned_cols=114 Identities=17% Similarity=0.151 Sum_probs=95.7
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccc--------------cCCchhHHHHHhcCCHHHHHHHHHhcCCCccccc
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKD--------------WNENIPLYFATSNTYIRGVCFLLELNGHSAIEHN 57 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d--------------~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~ 57 (127)
.|.||||.|+.. +.+|++++.++ ..|.+|||.|+..++.+++++|++.|+++. .++
T Consensus 127 ~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin-~~d 205 (743)
T TIGR00870 127 PGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADIL-TAD 205 (743)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchh-hHh
Confidence 388999999998 66788888643 368999999999999999999999999886 789
Q ss_pred ccCCChhhhhhhcC---------chHHHHHHHhccCCC-------CcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 58 IKTLYPIHLACKNG---------HVKVMVEMLKKQHCP-------MFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 58 ~~~~t~l~~a~~~~---------~~~~~~~l~~~~~~~-------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
..|+||||+|+..+ ...+.+++++.+... +..|.+|.|||++|+..|+.+++++|++.
T Consensus 206 ~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~ 279 (743)
T TIGR00870 206 SLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAI 279 (743)
T ss_pred hhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHH
Confidence 99999999999986 233556666554443 56789999999999999999999999984
No 63
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.75 E-value=2.6e-17 Score=101.55 Aligned_cols=114 Identities=23% Similarity=0.281 Sum_probs=104.2
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCC-----HHHHHHHHHhcC--CCcccccccCCChhh
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTY-----IRGVCFLLELNG--HSAIEHNIKTLYPIH 65 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~-----~~~~~~ll~~~~--~~~~~~~~~~~t~l~ 65 (127)
+.+++|.++.. +..+.+++.+|..|.||+|+|+..++ .+++++|++.++ .....++..|+||||
T Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~ 152 (235)
T COG0666 73 GRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLH 152 (235)
T ss_pred ccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhH
Confidence 46788888655 56778899999999999999999999 999999999999 454467999999999
Q ss_pred hhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 66 LACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 66 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+|+..|+.+++++++..|++++..+..|.|++++|+..+..++++.+++.
T Consensus 153 ~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~ 202 (235)
T COG0666 153 WAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDK 202 (235)
T ss_pred HHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999975
No 64
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.74 E-value=5.9e-18 Score=99.59 Aligned_cols=86 Identities=17% Similarity=0.081 Sum_probs=76.4
Q ss_pred CCcchHHHHHHH------------hhhcCCCCccc-cCCchhHHHHHhcCCHHHHHHHHHh-cCCCcccccccCCChhhh
Q 044402 1 MGNTAFHESLFI------------INRVTKWKTKD-WNENIPLYFATSNTYIRGVCFLLEL-NGHSAIEHNIKTLYPIHL 66 (127)
Q Consensus 1 ~g~~~lh~a~~~------------l~~~~~~~~~d-~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~t~l~~ 66 (127)
+|.||||+|+.. +..|++++.+| ..|.||||+|+..++.+++++|+.. ++++. .++..|.||||+
T Consensus 54 ~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n-~~~~~g~tpL~~ 132 (154)
T PHA02736 54 HGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNME-ILNYAFKTPYYV 132 (154)
T ss_pred CCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc-cccCCCCCHHHH
Confidence 488999999854 45688999998 4899999999999999999999984 78775 788999999999
Q ss_pred hhhcCchHHHHHHHhccCCCC
Q 044402 67 ACKNGHVKVMVEMLKKQHCPM 87 (127)
Q Consensus 67 a~~~~~~~~~~~l~~~~~~~~ 87 (127)
|+..++.+++++|+..|++.+
T Consensus 133 A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 133 ACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHHcCCHHHHHHHHHcCCCCC
Confidence 999999999999999988764
No 65
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.74 E-value=1.4e-16 Score=89.98 Aligned_cols=95 Identities=29% Similarity=0.426 Sum_probs=88.1
Q ss_pred ccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHH
Q 044402 21 TKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFV 100 (127)
Q Consensus 21 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a 100 (127)
.+|..|.|||++|+..++.+++++|++.+.... ..+..|.+|++.|+..+..+++++|+..+.+++..+..+.||+|+|
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~-~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a 80 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVN-AKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLA 80 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 456789999999999999999999999998864 6788899999999999999999999999988888889999999999
Q ss_pred HhcCcHHHHHHHHHhc
Q 044402 101 VKNGHVNMVKAIIKIS 116 (127)
Q Consensus 101 ~~~~~~~~~~~Ll~~~ 116 (127)
+..++.+++++|++.+
T Consensus 81 ~~~~~~~~~~~L~~~~ 96 (126)
T cd00204 81 ARNGNLDVVKLLLKHG 96 (126)
T ss_pred HHcCcHHHHHHHHHcC
Confidence 9999999999999874
No 66
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.73 E-value=3.4e-17 Score=113.19 Aligned_cols=114 Identities=17% Similarity=0.164 Sum_probs=103.9
Q ss_pred CCcchHHHHHHH---------hhhcCCCCc--------c---------------ccCCchhHHHHHhcCCHHHHHHHHHh
Q 044402 1 MGNTAFHESLFI---------INRVTKWKT--------K---------------DWNENIPLYFATSNTYIRGVCFLLEL 48 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~--------~---------------d~~g~t~l~~a~~~~~~~~~~~ll~~ 48 (127)
+|+||||+|+.+ +..|+|++. . -+.|..||..||=-++++++++|+++
T Consensus 183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~ 262 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH 262 (782)
T ss_pred cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc
Confidence 589999999988 556777766 1 23477899999999999999999999
Q ss_pred cCCCcccccccCCChhhhhhhcCchHHHHHHHhccCC--CCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 49 NGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHC--PMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 49 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~--~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
++++. .+|..|+|.||..+.+-..++..++++.|++ ....|..|-|||..|++.|..++.+.+++.
T Consensus 263 gAd~~-aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 263 GADPN-AQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred CCCCC-ccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 99997 8999999999999999999999999999999 799999999999999999999999999987
No 67
>PHA02792 ankyrin-like protein; Provisional
Probab=99.72 E-value=4.5e-17 Score=112.03 Aligned_cols=114 Identities=12% Similarity=0.031 Sum_probs=96.1
Q ss_pred CcchHHHHHHH----------hhhcCCCCccccCCchhHHHHHh-cCCHHHHHHHHHhcCCCc-----------------
Q 044402 2 GNTAFHESLFI----------INRVTKWKTKDWNENIPLYFATS-NTYIRGVCFLLELNGHSA----------------- 53 (127)
Q Consensus 2 g~~~lh~a~~~----------l~~~~~~~~~d~~g~t~l~~a~~-~~~~~~~~~ll~~~~~~~----------------- 53 (127)
|.+|+|.-+.. +.+|++++.++..+.+|+++|+. .++.+++++|++.|++..
T Consensus 71 ~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~ 150 (631)
T PHA02792 71 DFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRA 150 (631)
T ss_pred CccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccc
Confidence 56777776665 67889999999889999999966 689999999999997521
Q ss_pred ------------------ccccccCCChhhhhhhcC-------chHHHHHHHhccCCCCcccCCCCcHHHHHHhcC--cH
Q 044402 54 ------------------IEHNIKTLYPIHLACKNG-------HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNG--HV 106 (127)
Q Consensus 54 ------------------~~~~~~~~t~l~~a~~~~-------~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~--~~ 106 (127)
+.++..|.||||+++..+ +.++++.|+++|+++..+|..|.||||+|+... ..
T Consensus 151 ~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ 230 (631)
T PHA02792 151 EYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKR 230 (631)
T ss_pred cccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchH
Confidence 034556899999999988 899999999999999999999999999999998 78
Q ss_pred HHHHHHHHh
Q 044402 107 NMVKAIIKI 115 (127)
Q Consensus 107 ~~~~~Ll~~ 115 (127)
|+++.|+..
T Consensus 231 ei~~~L~~~ 239 (631)
T PHA02792 231 EIFDALFDS 239 (631)
T ss_pred HHHHHHHhc
Confidence 999999875
No 68
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.71 E-value=4.1e-17 Score=79.74 Aligned_cols=54 Identities=24% Similarity=0.463 Sum_probs=31.6
Q ss_pred CCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHH
Q 044402 60 TLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAII 113 (127)
Q Consensus 60 ~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll 113 (127)
|.||||+|+..|+.+++++|++.|.+++.+|.+|+||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 456666666666666666666666666666666666666666666666666664
No 69
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.71 E-value=2e-16 Score=111.20 Aligned_cols=86 Identities=23% Similarity=0.354 Sum_probs=82.5
Q ss_pred hHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHH
Q 044402 29 PLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNM 108 (127)
Q Consensus 29 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 108 (127)
.|+.|+..|+.+.++.|++.|++++ ..+..|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin-~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPN-CRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence 5889999999999999999999986 788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh
Q 044402 109 VKAIIKI 115 (127)
Q Consensus 109 ~~~Ll~~ 115 (127)
+++|+++
T Consensus 164 v~~Ll~~ 170 (664)
T PTZ00322 164 VQLLSRH 170 (664)
T ss_pred HHHHHhC
Confidence 9999987
No 70
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.70 E-value=1.1e-16 Score=114.01 Aligned_cols=58 Identities=14% Similarity=0.141 Sum_probs=39.1
Q ss_pred cCCChhhhhhhcCchHHHHHHHhccCCCCccc--------------CCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 59 KTLYPIHLACKNGHVKVMVEMLKKQHCPMFVT--------------NSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 59 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~--------------~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
.|.||||+|+..|+.+++++|++.|++++.++ ..|.|||+.|+..|+.+++++|++++
T Consensus 127 ~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~g 198 (743)
T TIGR00870 127 PGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDP 198 (743)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCC
Confidence 46677777777777777777777777665432 24667777777777777777777663
No 71
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.70 E-value=1.2e-16 Score=93.18 Aligned_cols=95 Identities=21% Similarity=0.290 Sum_probs=88.0
Q ss_pred hHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHH
Q 044402 29 PLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNM 108 (127)
Q Consensus 29 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 108 (127)
-+.+|+..+....|+.||+..++-.+.++..+.||||-|+..|+.++++.|+..|++++.+...||||||.||+-++.++
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~v 145 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEV 145 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhH
Confidence 47789999999999999998888777899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh-cccccccc
Q 044402 109 VKAIIKI-SETNISMD 123 (127)
Q Consensus 109 ~~~Ll~~-~~~~~~~~ 123 (127)
+.+|+++ .+++-.++
T Consensus 146 a~~LLqhgaDVnA~t~ 161 (228)
T KOG0512|consen 146 AGRLLQHGADVNAQTK 161 (228)
T ss_pred HHHHHhccCccccccc
Confidence 9999999 77776554
No 72
>PHA02792 ankyrin-like protein; Provisional
Probab=99.70 E-value=2.1e-16 Score=108.82 Aligned_cols=115 Identities=9% Similarity=0.005 Sum_probs=94.7
Q ss_pred chHHHHHHH---------hhhcCCCCccccCC--chhHHHHHhcCCH---HHHHHHHHhcCCCcccccccCCChhhhhhh
Q 044402 4 TAFHESLFI---------INRVTKWKTKDWNE--NIPLYFATSNTYI---RGVCFLLELNGHSAIEHNIKTLYPIHLACK 69 (127)
Q Consensus 4 ~~lh~a~~~---------l~~~~~~~~~d~~g--~t~l~~a~~~~~~---~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~ 69 (127)
.+++.|+.. +..|++++.+|..| .||||+|+..... +++++++++|+++. .++..|+||||+|+.
T Consensus 341 n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN-~kD~~G~TPLh~Aa~ 419 (631)
T PHA02792 341 NKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDIN-KIDKHGRSILYYCIE 419 (631)
T ss_pred hHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccc-cccccCcchHHHHHH
Confidence 346667655 66899999998775 6999998776654 35788999999986 789999999999999
Q ss_pred cCchHHHHHHHhccCCCCcccCCCCcHHHHHHh--c--------CcHHHHHHHHHh-cccc
Q 044402 70 NGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVK--N--------GHVNMVKAIIKI-SETN 119 (127)
Q Consensus 70 ~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~--~--------~~~~~~~~Ll~~-~~~~ 119 (127)
.++.+++++|++.|++++.++..|.|||++|.. . ...++++.|+++ +...
T Consensus 420 ~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~ 480 (631)
T PHA02792 420 SHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE 480 (631)
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence 999999999999999999999999999999975 2 235668888877 5443
No 73
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.69 E-value=2.9e-16 Score=82.52 Aligned_cols=84 Identities=17% Similarity=0.126 Sum_probs=49.9
Q ss_pred HHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHH
Q 044402 30 LYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMV 109 (127)
Q Consensus 30 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 109 (127)
+.++..+|..+-|+.....|-+.+ ....|.+|||+|+-+|..++++||+..|++++.+|..|-|||..|++.|+.+|+
T Consensus 6 ~~W~vkNG~~DeVk~~v~~g~nVn--~~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNEGLNVN--EIYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV 83 (117)
T ss_pred HhhhhccCcHHHHHHHHHccccHH--HHhCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence 455556666665555555554442 223556666666666666666666666666666666666666666666666666
Q ss_pred HHHHHh
Q 044402 110 KAIIKI 115 (127)
Q Consensus 110 ~~Ll~~ 115 (127)
++|++.
T Consensus 84 klLL~~ 89 (117)
T KOG4214|consen 84 KLLLQN 89 (117)
T ss_pred HHHHHc
Confidence 666655
No 74
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.68 E-value=1.7e-16 Score=83.39 Aligned_cols=87 Identities=14% Similarity=0.209 Sum_probs=75.0
Q ss_pred hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCC
Q 044402 13 INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNS 92 (127)
Q Consensus 13 l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~ 92 (127)
..++-++|.. ..|++|||||+-+|+.++++||+..|+++. .++..|.|||-.|++-||.+++++|++.|++-..+..+
T Consensus 22 v~~g~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~-~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~Pd 99 (117)
T KOG4214|consen 22 VNEGLNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQ-DKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPD 99 (117)
T ss_pred HHccccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccC-CccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCC
Confidence 3444444432 479999999999999999999999999997 79999999999999999999999999999999998888
Q ss_pred CCcHHHHHH
Q 044402 93 GYNILHFVV 101 (127)
Q Consensus 93 ~~t~l~~a~ 101 (127)
|.+.+..+-
T Consensus 100 G~~~~eate 108 (117)
T KOG4214|consen 100 GTALIEATE 108 (117)
T ss_pred chhHHhhcc
Confidence 887765443
No 75
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.67 E-value=2.6e-16 Score=76.87 Aligned_cols=54 Identities=26% Similarity=0.389 Sum_probs=45.6
Q ss_pred CchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHH
Q 044402 26 ENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEML 80 (127)
Q Consensus 26 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~ 80 (127)
|+||||+|+..|+.+++++|++.+.++. ..+..|.||||+|+..|+++++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din-~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADIN-AQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT--B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 7899999999999999999999999986 67999999999999999999999985
No 76
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.67 E-value=7.1e-16 Score=96.34 Aligned_cols=103 Identities=18% Similarity=0.139 Sum_probs=96.2
Q ss_pred hhhcC-CCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccC
Q 044402 13 INRVT-KWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTN 91 (127)
Q Consensus 13 l~~~~-~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~ 91 (127)
++++. .+|..|..|.++|..|+..|+.+.++.|++.|++++..+...+.|||++|+..|+.++.++|++.|+.....+.
T Consensus 31 LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNs 110 (396)
T KOG1710|consen 31 LLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNS 110 (396)
T ss_pred HHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccc
Confidence 55554 48999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 92 SGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 92 ~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
-|+|+-..|+.-|+.+|+..+-.+
T Consensus 111 vgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 111 VGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred hhhhHHHHHHHhcchHHHHHHhcc
Confidence 999999999999999999887654
No 77
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.66 E-value=1.4e-16 Score=78.32 Aligned_cols=54 Identities=24% Similarity=0.335 Sum_probs=23.4
Q ss_pred HHhc-CCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHH
Q 044402 46 LELN-GHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFV 100 (127)
Q Consensus 46 l~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a 100 (127)
++.+ .++ +..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||+++|
T Consensus 2 L~~~~~~~-n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 2 LEHGPADV-NAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp ----T--T-T---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CccCcCCC-cCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 4445 333 35666677777777777777777777766777777777777777665
No 78
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.63 E-value=7.1e-16 Score=106.29 Aligned_cols=122 Identities=20% Similarity=0.278 Sum_probs=100.1
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.+|||+|+-. ++.+..+|.....|.||||.++.++|.+.+.+|+.+++++. ..+..+.|++-.|+++|
T Consensus 81 kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~-i~nns~~t~ldlA~qfg 159 (854)
T KOG0507|consen 81 KGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPF-IRNNSKETVLDLASRFG 159 (854)
T ss_pred cCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCcc-ccCcccccHHHHHHHhh
Confidence 367889988877 55667788888999999999999999999999999999985 68888899999999999
Q ss_pred chHHHHHHHhccCCC--------CcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccccccc
Q 044402 72 HVKVMVEMLKKQHCP--------MFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNISMD 123 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~--------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~ 123 (127)
..++++.|++...+. ..++..+.+|||.|+++|+.++++.|++. -+++..+.
T Consensus 160 r~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~ 220 (854)
T KOG0507|consen 160 RAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTE 220 (854)
T ss_pred hhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccc
Confidence 999999888863222 34566778899999999999999999888 66665553
No 79
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.62 E-value=3.5e-15 Score=104.99 Aligned_cols=96 Identities=17% Similarity=0.118 Sum_probs=84.4
Q ss_pred hHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHH
Q 044402 5 AFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKV 75 (127)
Q Consensus 5 ~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 75 (127)
.|+.|+.. +..|++++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..++.++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn-~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPT-LLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHCCcHHH
Confidence 36666665 55789999999999999999999999999999999999986 789999999999999999999
Q ss_pred HHHHHhc-------cCCCCcccCCCCcHHHHHH
Q 044402 76 MVEMLKK-------QHCPMFVTNSGYNILHFVV 101 (127)
Q Consensus 76 ~~~l~~~-------~~~~~~~~~~~~t~l~~a~ 101 (127)
+++|+.. |++.+..+..|.+|+..+.
T Consensus 164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 9999998 8888888887877766544
No 80
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.61 E-value=8.9e-16 Score=75.40 Aligned_cols=52 Identities=21% Similarity=0.220 Sum_probs=32.8
Q ss_pred hc-CCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhh
Q 044402 15 RV-TKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLA 67 (127)
Q Consensus 15 ~~-~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a 67 (127)
.+ .+++.+|..|.||||+|+.+|+.+++++|++.++++. .++..|+||+++|
T Consensus 4 ~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~-~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 4 HGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPN-AKDKDGQTPLHYA 56 (56)
T ss_dssp --T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT----TTS--HHHH-
T ss_pred cCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCC-CCcCCCCCHHHhC
Confidence 45 6789999999999999999999999999999999996 8999999999986
No 81
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.59 E-value=6.3e-15 Score=98.53 Aligned_cols=85 Identities=16% Similarity=0.151 Sum_probs=76.6
Q ss_pred HHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHH
Q 044402 30 LYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMV 109 (127)
Q Consensus 30 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 109 (127)
|.-|+..|-+++|+..+..-.++. ..+..|.|+||.|+-.||+++|+||++.|++++..|.+||||||+|+.-++.-++
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpS-qpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c 632 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPS-QPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC 632 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCC-CCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence 444788899999999888878876 7888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 044402 110 KAIIKI 115 (127)
Q Consensus 110 ~~Ll~~ 115 (127)
+.|++.
T Consensus 633 kqLVe~ 638 (752)
T KOG0515|consen 633 KQLVES 638 (752)
T ss_pred HHHHhc
Confidence 999988
No 82
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.58 E-value=1.1e-14 Score=101.00 Aligned_cols=115 Identities=17% Similarity=0.213 Sum_probs=97.1
Q ss_pred CcchHHHHHHH-----------hhhcCCCCc------cccCCchhHHHHHhcCCHHHHHHHHHhcCCCcc----------
Q 044402 2 GNTAFHESLFI-----------INRVTKWKT------KDWNENIPLYFATSNTYIRGVCFLLELNGHSAI---------- 54 (127)
Q Consensus 2 g~~~lh~a~~~-----------l~~~~~~~~------~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~---------- 54 (127)
|.|.||.|.-. +++-++--+ ..+.|.||||.|..+.+.++|++|++.|+++.-
T Consensus 143 GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~ 222 (782)
T KOG3676|consen 143 GETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPD 222 (782)
T ss_pred hhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcc
Confidence 78899998875 444443111 346799999999999999999999999987432
Q ss_pred ---cc---------cccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 55 ---EH---------NIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 55 ---~~---------~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
.. ...|..||.+|+-.++.+++++|++.|+|++.+|..|+|.||..+.+-..+|...+++.+
T Consensus 223 dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~g 296 (782)
T KOG3676|consen 223 DQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELG 296 (782)
T ss_pred cccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcC
Confidence 11 345788999999999999999999999999999999999999999998899999999983
No 83
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.52 E-value=2.7e-13 Score=83.55 Aligned_cols=100 Identities=23% Similarity=0.338 Sum_probs=90.3
Q ss_pred CccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc-----hHHHHHHHhccC---CCCcccC
Q 044402 20 KTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH-----VKVMVEMLKKQH---CPMFVTN 91 (127)
Q Consensus 20 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~-----~~~~~~l~~~~~---~~~~~~~ 91 (127)
...+..+.++++.++..+..+.+.+++..+.++ ..++..|.||+|+|+..++ .+++++|++.|+ ....++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~ 145 (235)
T COG0666 67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDE 145 (235)
T ss_pred ccCCccccCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCC
Confidence 345666899999999999999999999999999 4899999999999999999 999999999999 5577799
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 92 SGYNILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 92 ~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
.|.||||+|+..|+.++++.|++. +++..
T Consensus 146 ~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~ 175 (235)
T COG0666 146 DGNTPLHWAALNGDADIVELLLEAGADPNS 175 (235)
T ss_pred CCCchhHHHHHcCchHHHHHHHhcCCCCcc
Confidence 999999999999999999999988 44443
No 84
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.48 E-value=4.1e-13 Score=89.70 Aligned_cols=106 Identities=17% Similarity=0.208 Sum_probs=92.5
Q ss_pred hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCC-----
Q 044402 13 INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPM----- 87 (127)
Q Consensus 13 l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~----- 87 (127)
+..++.++..+.+|.|++|-+|.-.+.+||++|+++|++++ ..+..+|||+|.|+.-|+..++++|++.|++..
T Consensus 60 l~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn-~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsd 138 (527)
T KOG0505|consen 60 LNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVN-AQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSD 138 (527)
T ss_pred hccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCcc-ccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCC
Confidence 55678889999999999999999999999999999999996 899999999999999999999999999776441
Q ss_pred ------------------------------------------------------cccCCCCcHHHHHHhcCcHHHHHHHH
Q 044402 88 ------------------------------------------------------FVTNSGYNILHFVVKNGHVNMVKAII 113 (127)
Q Consensus 88 ------------------------------------------------------~~~~~~~t~l~~a~~~~~~~~~~~Ll 113 (127)
..+..|.|.+|+|+-.|+.++.++|+
T Consensus 139 g~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl 218 (527)
T KOG0505|consen 139 GNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLL 218 (527)
T ss_pred CCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHH
Confidence 23455889999999999999999999
Q ss_pred Hh-cccc
Q 044402 114 KI-SETN 119 (127)
Q Consensus 114 ~~-~~~~ 119 (127)
+. ..+.
T Consensus 219 ~ag~~~~ 225 (527)
T KOG0505|consen 219 QAGYSVN 225 (527)
T ss_pred HhccCcc
Confidence 88 4433
No 85
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=4.6e-13 Score=89.81 Aligned_cols=101 Identities=15% Similarity=0.092 Sum_probs=85.6
Q ss_pred hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCccc-C
Q 044402 13 INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVT-N 91 (127)
Q Consensus 13 l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~ 91 (127)
+.+-.|+..-++.|.|+||-|.-.||.++|+||++.|++++ ..|..||||||.|+.-+++.+++.|++.|+.+-... .
T Consensus 570 i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVN-a~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlS 648 (752)
T KOG0515|consen 570 IYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVN-AADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLS 648 (752)
T ss_pred HHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCccc-CccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecc
Confidence 44556777788999999999999999999999999999996 899999999999999999999999999999884333 4
Q ss_pred CCCcHHHHH--HhcCcHHHHHHHHH
Q 044402 92 SGYNILHFV--VKNGHVNMVKAIIK 114 (127)
Q Consensus 92 ~~~t~l~~a--~~~~~~~~~~~Ll~ 114 (127)
++.|+..-. .+.|+..|.+||..
T Consensus 649 DmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 649 DMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred cccchhhhcchhhhhHHHHHHHHHH
Confidence 556766542 36678889999863
No 86
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.39 E-value=4.7e-12 Score=84.43 Aligned_cols=96 Identities=19% Similarity=0.237 Sum_probs=86.7
Q ss_pred CccccCCchh------HHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCC
Q 044402 20 KTKDWNENIP------LYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSG 93 (127)
Q Consensus 20 ~~~d~~g~t~------l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~ 93 (127)
-.+|.+|.+. ||.+++-++.++.-.|+..|++.+...-..|.||||.|++.|+..-+++|+-+|+++...|.+|
T Consensus 121 ~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~G 200 (669)
T KOG0818|consen 121 PCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSG 200 (669)
T ss_pred CCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCC
Confidence 3467776664 9999999999999999999999976666779999999999999999999999999999999999
Q ss_pred CcHHHHHHhcCcHHHHHHHHHh
Q 044402 94 YNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 94 ~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+||+.+|-..|+.++.+.|++.
T Consensus 201 mtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 201 MTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred CcHHHHHHhcCchHHHHHHHHH
Confidence 9999999999999999888764
No 87
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.37 E-value=5.4e-13 Score=96.14 Aligned_cols=119 Identities=20% Similarity=0.227 Sum_probs=107.9
Q ss_pred chHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchH
Q 044402 4 TAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVK 74 (127)
Q Consensus 4 ~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 74 (127)
|+|-.||.. +.+|+++.-+|+.|.+||..|+..||..+|+.|+...+++...+++.+.|+|.+||..|.++
T Consensus 759 t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~ 838 (2131)
T KOG4369|consen 759 TNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTR 838 (2131)
T ss_pred ccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcch
Confidence 566666665 66789999999999999999999999999999999999887678899999999999999999
Q ss_pred HHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccccc
Q 044402 75 VMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNISM 122 (127)
Q Consensus 75 ~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~ 122 (127)
++++|+..|++..-++...-|||.+|...|+.++++.|+.+ .+++.++
T Consensus 839 vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrt 887 (2131)
T KOG4369|consen 839 VVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRT 887 (2131)
T ss_pred HHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhccccccccc
Confidence 99999999999999999999999999999999999999998 5666655
No 88
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.31 E-value=1.2e-12 Score=91.83 Aligned_cols=84 Identities=18% Similarity=0.169 Sum_probs=78.0
Q ss_pred CCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHH
Q 044402 19 WKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILH 98 (127)
Q Consensus 19 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~ 98 (127)
.+++|..|+++||.++.-+.-++++||+++|.++.......|+||||-|...|+++++-.|+.+|.+..++|.+|..||.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq 124 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ 124 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence 56799999999999999999999999999999997444467999999999999999999999999999999999999999
Q ss_pred HHHh
Q 044402 99 FVVK 102 (127)
Q Consensus 99 ~a~~ 102 (127)
..++
T Consensus 125 ~~~r 128 (1267)
T KOG0783|consen 125 FLSR 128 (1267)
T ss_pred HHhh
Confidence 8776
No 89
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.29 E-value=9.1e-12 Score=82.70 Aligned_cols=93 Identities=17% Similarity=0.162 Sum_probs=84.6
Q ss_pred cccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhc-cCCCCcccCCCCcHHHHH
Q 044402 22 KDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKK-QHCPMFVTNSGYNILHFV 100 (127)
Q Consensus 22 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~~t~l~~a 100 (127)
++..+..++++|+..|.+..++.+.-.|.+.. .++....|+||.|+.-|+++++++|++. +.+++.+|+.|+|||.-|
T Consensus 502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~-~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA 580 (622)
T KOG0506|consen 502 RENDTVINVMYAAKNGDLSALRRFALQGMDLE-TKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDA 580 (622)
T ss_pred ccccchhhhhhhhhcCCHHHHHHHHHhccccc-ccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHh
Confidence 34556678999999999999999888888885 8999999999999999999999999986 678899999999999999
Q ss_pred HhcCcHHHHHHHHHh
Q 044402 101 VKNGHVNMVKAIIKI 115 (127)
Q Consensus 101 ~~~~~~~~~~~Ll~~ 115 (127)
...++.+++++|.+.
T Consensus 581 ~~F~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 581 KHFKHKEVVKLLEEA 595 (622)
T ss_pred HhcCcHHHHHHHHHH
Confidence 999999999999876
No 90
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.15 E-value=4.5e-10 Score=70.85 Aligned_cols=95 Identities=13% Similarity=0.114 Sum_probs=81.8
Q ss_pred CchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCc-ccCCCCcHHHHHHhcC
Q 044402 26 ENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMF-VTNSGYNILHFVVKNG 104 (127)
Q Consensus 26 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~-~~~~~~t~l~~a~~~~ 104 (127)
-..||.-+.-.+..+-...||+.-...+ ..|..|.++|.-|+..|+.+.++.+++.|+|++. ++..+-|||++|+..|
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn-~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG 90 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTVRQVN-QRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG 90 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHhhhhh-ccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence 3468889999999888888888755554 7899999999999999999999999999999965 4588999999999999
Q ss_pred cHHHHHHHHHhcccccc
Q 044402 105 HVNMVKAIIKISETNIS 121 (127)
Q Consensus 105 ~~~~~~~Ll~~~~~~~~ 121 (127)
..++++.|++.|.....
T Consensus 91 n~dvcrllldaGa~~~~ 107 (396)
T KOG1710|consen 91 NQDVCRLLLDAGARMYL 107 (396)
T ss_pred CchHHHHHHhccCcccc
Confidence 99999999988544433
No 91
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.14 E-value=5.5e-11 Score=79.12 Aligned_cols=81 Identities=17% Similarity=0.067 Sum_probs=71.1
Q ss_pred chHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchH
Q 044402 4 TAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVK 74 (127)
Q Consensus 4 ~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 74 (127)
.++++|+.. .+.+.++..+|++.+|.||.|+..|++++++||++........++++|+|||--|..++|.+
T Consensus 508 i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~ 587 (622)
T KOG0506|consen 508 INVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKE 587 (622)
T ss_pred hhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHH
Confidence 456677666 77889999999999999999999999999999999765544589999999999999999999
Q ss_pred HHHHHHhccC
Q 044402 75 VMVEMLKKQH 84 (127)
Q Consensus 75 ~~~~l~~~~~ 84 (127)
++++|.+...
T Consensus 588 v~k~L~~~~~ 597 (622)
T KOG0506|consen 588 VVKLLEEAQY 597 (622)
T ss_pred HHHHHHHHhc
Confidence 9999988643
No 92
>PF13606 Ank_3: Ankyrin repeat
Probab=99.12 E-value=1e-10 Score=49.81 Aligned_cols=26 Identities=42% Similarity=0.474 Sum_probs=12.3
Q ss_pred CchhHHHHHhcCCHHHHHHHHHhcCC
Q 044402 26 ENIPLYFATSNTYIRGVCFLLELNGH 51 (127)
Q Consensus 26 g~t~l~~a~~~~~~~~~~~ll~~~~~ 51 (127)
|+||||+||..|+.+++++|+++|++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gad 27 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGAD 27 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 44444444444444444444444443
No 93
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=99.12 E-value=2.8e-10 Score=77.61 Aligned_cols=103 Identities=9% Similarity=-0.055 Sum_probs=93.7
Q ss_pred hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCc-ccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccC
Q 044402 13 INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSA-IEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTN 91 (127)
Q Consensus 13 l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~-~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~ 91 (127)
.+.|.++..++.+-++.||||+.-|+-++|+|++++++... ...+..|.|+||.|+-.++..++++|++.|++....|.
T Consensus 886 h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~ 965 (1004)
T KOG0782|consen 886 HLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDS 965 (1004)
T ss_pred HhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheeccc
Confidence 45678888899999999999999999999999999987532 24567899999999999999999999999999999999
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 92 SGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 92 ~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
.|.||-.-|-+.|..++..||-++
T Consensus 966 kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 966 KGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred CCCChHHHHHhcCCchHHHHHhhh
Confidence 999999999999999999999866
No 94
>PF13606 Ank_3: Ankyrin repeat
Probab=99.10 E-value=1.7e-10 Score=49.11 Aligned_cols=29 Identities=24% Similarity=0.392 Sum_probs=27.2
Q ss_pred cCCChhhhhhhcCchHHHHHHHhccCCCC
Q 044402 59 KTLYPIHLACKNGHVKVMVEMLKKQHCPM 87 (127)
Q Consensus 59 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~~ 87 (127)
.|+||||+|+..|+++++++|++.|++++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 48999999999999999999999999876
No 95
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.09 E-value=6.7e-10 Score=74.75 Aligned_cols=88 Identities=23% Similarity=0.277 Sum_probs=70.0
Q ss_pred hhHHHHHhcCCHHHHHH-HHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcH
Q 044402 28 IPLYFATSNTYIRGVCF-LLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHV 106 (127)
Q Consensus 28 t~l~~a~~~~~~~~~~~-ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~ 106 (127)
.|+|++......+-... +....+......+..|.||||+|+..|+.+.++.|+..|+++..+|+.|++|||-|+..|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence 35888888887665444 32222222236788889999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHh
Q 044402 107 NMVKAIIKI 115 (127)
Q Consensus 107 ~~~~~Ll~~ 115 (127)
+++..++++
T Consensus 102 q~i~~vlr~ 110 (560)
T KOG0522|consen 102 QIITEVLRH 110 (560)
T ss_pred HHHHHHHHH
Confidence 887777765
No 96
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.07 E-value=2.7e-10 Score=49.70 Aligned_cols=27 Identities=26% Similarity=0.237 Sum_probs=12.1
Q ss_pred CchhHHHHHhcCCHHHHHHHHHhcCCC
Q 044402 26 ENIPLYFATSNTYIRGVCFLLELNGHS 52 (127)
Q Consensus 26 g~t~l~~a~~~~~~~~~~~ll~~~~~~ 52 (127)
|.||||+|+..++.+++++|++.|+++
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~ 28 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADI 28 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCT
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCC
Confidence 344444444444444444444444443
No 97
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=99.07 E-value=7.8e-10 Score=75.27 Aligned_cols=89 Identities=15% Similarity=0.160 Sum_probs=76.8
Q ss_pred HHHHHhcCCHHHHHHHHHhcCCCc---ccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcH
Q 044402 30 LYFATSNTYIRGVCFLLELNGHSA---IEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHV 106 (127)
Q Consensus 30 l~~a~~~~~~~~~~~ll~~~~~~~---~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~ 106 (127)
|.-|....++..+-.||.+|...- ...+..|.|+||+||+.|++.+.++|+=+|+++...|.+|+|+|.||-..|..
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sq 707 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQ 707 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccH
Confidence 556677777888888998886532 13456689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccc
Q 044402 107 NMVKAIIKISET 118 (127)
Q Consensus 107 ~~~~~Ll~~~~~ 118 (127)
+|+..|+++|..
T Consensus 708 ec~d~llq~gcp 719 (749)
T KOG0705|consen 708 ECIDVLLQYGCP 719 (749)
T ss_pred HHHHHHHHcCCC
Confidence 999999998544
No 98
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.03 E-value=2.1e-10 Score=83.32 Aligned_cols=113 Identities=17% Similarity=0.104 Sum_probs=86.4
Q ss_pred cchHHHHHHH---------hhhcCCCCccc--cCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 3 NTAFHESLFI---------INRVTKWKTKD--WNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 3 ~~~lh~a~~~---------l~~~~~~~~~d--~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|||-+|... +..|+.+|.+. +-|..||+.|..+||.+....|++.|++++.....+.+|+|-+|+..|
T Consensus 858 ytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqg 937 (2131)
T KOG4369|consen 858 YTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQG 937 (2131)
T ss_pred cCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccC
Confidence 4666666554 45566777755 457788888888888888888888888876444556778888888888
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
..+++.+|+.+.+++..+-..|-|||.-++..|+.++-.+|+..
T Consensus 938 r~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~ 981 (2131)
T KOG4369|consen 938 RPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAA 981 (2131)
T ss_pred cchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhc
Confidence 88888888888888877778888888888888888888888766
No 99
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.98 E-value=1.4e-09 Score=47.35 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=30.4
Q ss_pred cCCChhhhhhhcCchHHHHHHHhccCCCCcccC
Q 044402 59 KTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTN 91 (127)
Q Consensus 59 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~ 91 (127)
.|.||||+|+..|+.+++++|++.|++++.+|.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 478999999999999999999999999988763
No 100
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.85 E-value=9.4e-09 Score=69.41 Aligned_cols=77 Identities=18% Similarity=0.246 Sum_probs=65.2
Q ss_pred hHHHHHHH-----------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCch
Q 044402 5 AFHESLFI-----------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHV 73 (127)
Q Consensus 5 ~lh~a~~~-----------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~ 73 (127)
|+|.++.. ......++.+|..|.||||.|+.-|+...++.|+..+++.. .++..||+|||.|+..|+.
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~-~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVS-IKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCcc-ccccccccHHHHHHHcCCH
Confidence 47777666 11224678899999999999999999999999999999886 8999999999999999999
Q ss_pred HHHHHHHhc
Q 044402 74 KVMVEMLKK 82 (127)
Q Consensus 74 ~~~~~l~~~ 82 (127)
.++..++.+
T Consensus 102 q~i~~vlr~ 110 (560)
T KOG0522|consen 102 QIITEVLRH 110 (560)
T ss_pred HHHHHHHHH
Confidence 887776663
No 101
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.84 E-value=2.8e-09 Score=75.55 Aligned_cols=75 Identities=15% Similarity=0.180 Sum_probs=65.6
Q ss_pred HHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCccc-CCCCcHHHHHHhcCcHHHHHHHHHhccc
Q 044402 44 FLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVT-NSGYNILHFVVKNGHVNMVKAIIKISET 118 (127)
Q Consensus 44 ~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~Ll~~~~~ 118 (127)
|+-..+.+..+.+|..|.++||+++.-+..++++||+++|+++..+| ..|+||||-|+..|+.+|+-.|++++.-
T Consensus 36 F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~S 111 (1267)
T KOG0783|consen 36 FSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRS 111 (1267)
T ss_pred HHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCc
Confidence 44445555556789999999999999999999999999999999998 7799999999999999999999988543
No 102
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.78 E-value=2.9e-08 Score=59.17 Aligned_cols=70 Identities=16% Similarity=0.097 Sum_probs=63.3
Q ss_pred cCCCCccccCCchhHHHHHhcCCHHHHHHHHHhc-CCCcccccccCCChhhhhhhcCchHHHHHHHhccCCC
Q 044402 16 VTKWKTKDWNENIPLYFATSNTYIRGVCFLLELN-GHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCP 86 (127)
Q Consensus 16 ~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~ 86 (127)
+.++|++|..|+|++++|+..|.-+.+.||+.+| +.+ ...+..+.+.+-+|.+.|+.+++..|.+...+-
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~v-gv~d~ssldaaqlaek~g~~~fvh~lfe~~~et 72 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFV-GVTDESSLDAAQLAEKGGAQAFVHSLFENDRET 72 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccc-cccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence 4689999999999999999999999999999999 555 478899999999999999999999999975554
No 103
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.71 E-value=7.4e-08 Score=64.97 Aligned_cols=68 Identities=15% Similarity=0.177 Sum_probs=61.1
Q ss_pred hhhcCCCCccc-cCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHh
Q 044402 13 INRVTKWKTKD-WNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLK 81 (127)
Q Consensus 13 l~~~~~~~~~d-~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~ 81 (127)
|.-|+++|..+ +.|.||||.|+..|+..-++.|+-+|+++. ..+..|.||+.+|-..||-++.+-|++
T Consensus 153 l~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~-a~d~~GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 153 LSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPG-AQDSSGMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred HHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCC-CCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence 67789999977 559999999999999999999999999997 899999999999999999887666655
No 104
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.68 E-value=3.7e-08 Score=70.72 Aligned_cols=85 Identities=20% Similarity=0.200 Sum_probs=78.0
Q ss_pred cCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhc
Q 044402 24 WNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKN 103 (127)
Q Consensus 24 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 103 (127)
..|+++||.|+..+....+++|+++|++++ ..+..|.+|+|.+...|+...+..++.+|+++...+.+|.+|+.+|...
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn-~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~ 732 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVN-ALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA 732 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcch-hhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh
Confidence 557999999999999999999999999985 8999999999999999999999999999999999999999999999877
Q ss_pred CcHHHH
Q 044402 104 GHVNMV 109 (127)
Q Consensus 104 ~~~~~~ 109 (127)
.+.+.+
T Consensus 733 ~~~d~~ 738 (785)
T KOG0521|consen 733 ANADIV 738 (785)
T ss_pred ccccHH
Confidence 554443
No 105
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.58 E-value=5.4e-07 Score=59.21 Aligned_cols=73 Identities=19% Similarity=0.044 Sum_probs=63.3
Q ss_pred hhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHH
Q 044402 28 IPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVV 101 (127)
Q Consensus 28 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 101 (127)
.-|-+||+.|..+.+++|++.|.+++ ..+....+||.+|+.-||.+++++|+++|+--..-..+|.-++.-|.
T Consensus 38 ~elceacR~GD~d~v~~LVetgvnVN-~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~YgaL 110 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVNVN-AVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHYGAL 110 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCCcc-hhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhhhhh
Confidence 35889999999999999999999996 88999999999999999999999999999877666667766654443
No 106
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.58 E-value=1.5e-07 Score=64.50 Aligned_cols=66 Identities=9% Similarity=0.010 Sum_probs=60.9
Q ss_pred cccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCc
Q 044402 22 KDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMF 88 (127)
Q Consensus 22 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~ 88 (127)
-+.+|+|+||.||+.|++.+.++|+=+|.+.. ..+..|.|+|.+|-..|..+++..|+.+|+..+.
T Consensus 657 ~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~-~rda~g~t~l~yar~a~sqec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 657 GEGDGRTALHLAARKGNVVLAQLLIWYGVDVM-ARDAHGRTALFYARQAGSQECIDVLLQYGCPDEC 722 (749)
T ss_pred cCCCCcchhhhhhhhcchhHHHHHHHhCccce-ecccCCchhhhhHhhcccHHHHHHHHHcCCCccc
Confidence 55778999999999999999999999999996 8999999999999999999999999999987743
No 107
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.48 E-value=3.8e-07 Score=62.84 Aligned_cols=93 Identities=12% Similarity=0.083 Sum_probs=74.5
Q ss_pred HHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCC--CcccCCCCcHHHHHHhcCcHH
Q 044402 30 LYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCP--MFVTNSGYNILHFVVKNGHVN 107 (127)
Q Consensus 30 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~--~~~~~~~~t~l~~a~~~~~~~ 107 (127)
+.-|+..+.+-.++....+|.... .++..-.+.||+|+.-|+-++++|+++.|..- +..+..|.|+||-|+..++..
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll-~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~ 948 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLL-IQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRA 948 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceE-eeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchH
Confidence 455666666555555666666664 68888889999999999999999999987654 778899999999999999999
Q ss_pred HHHHHHHhcccccccc
Q 044402 108 MVKAIIKISETNISMD 123 (127)
Q Consensus 108 ~~~~Ll~~~~~~~~~~ 123 (127)
++.+|++.+..-..+|
T Consensus 949 vc~~lvdagasl~ktd 964 (1004)
T KOG0782|consen 949 VCQLLVDAGASLRKTD 964 (1004)
T ss_pred HHHHHHhcchhheecc
Confidence 9999998855444443
No 108
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.48 E-value=4.2e-07 Score=59.69 Aligned_cols=58 Identities=17% Similarity=0.193 Sum_probs=54.1
Q ss_pred CChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhccc
Q 044402 61 LYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKISET 118 (127)
Q Consensus 61 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~ 118 (127)
+.-|..||+.|+.+.+++|++.|.+++..|....+||.+|+..|+..++++|+++|.+
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAi 94 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAI 94 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCc
Confidence 4568899999999999999999999999999999999999999999999999999543
No 109
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.47 E-value=2.3e-07 Score=67.14 Aligned_cols=112 Identities=13% Similarity=0.050 Sum_probs=69.4
Q ss_pred CcchHHHHHHH--------hhh--cCCCCccccCCchhHHHHHhcCCHHHHHHHH-HhcCCCcccccccCCChhhhhhhc
Q 044402 2 GNTAFHESLFI--------INR--VTKWKTKDWNENIPLYFATSNTYIRGVCFLL-ELNGHSAIEHNIKTLYPIHLACKN 70 (127)
Q Consensus 2 g~~~lh~a~~~--------l~~--~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll-~~~~~~~~~~~~~~~t~l~~a~~~ 70 (127)
|.+.+|.++.. +.+ +......|..|...+|. |..++.++.-+++ -.+..+. +++..||||||+|+.+
T Consensus 574 ~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~-i~D~~G~tpL~wAa~~ 651 (975)
T KOG0520|consen 574 DMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAID-IRDRNGWTPLHWAAFR 651 (975)
T ss_pred chHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccc-cccCCCCcccchHhhc
Confidence 56667777666 222 23344455555556666 4444444433332 3444443 6778888888888888
Q ss_pred CchHHHHHHHhccCCC------CcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 71 GHVKVMVEMLKKQHCP------MFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 71 ~~~~~~~~l~~~~~~~------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
|+..++..|.+.|+.. ......|.|+-.+|...|+..+.-+|-+.
T Consensus 652 G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 652 GREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred CHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 8888888887766655 22345577777777777777777666543
No 110
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.43 E-value=1.1e-06 Score=52.57 Aligned_cols=66 Identities=14% Similarity=0.143 Sum_probs=60.7
Q ss_pred cccccCCChhhhhhhcCchHHHHHHHhcc-CCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 55 EHNIKTLYPIHLACKNGHVKVMVEMLKKQ-HCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 55 ~~~~~~~t~l~~a~~~~~~~~~~~l~~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
..|..|||+++.|+.-|.-+.+.||+.+| +.+...|..+.+...+|-+.|..+.++.|.+. ++...
T Consensus 7 ~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~ 74 (223)
T KOG2384|consen 7 ARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSH 74 (223)
T ss_pred chhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCC
Confidence 68889999999999999999999999999 88899999999999999999999999999987 44433
No 111
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.29 E-value=3.5e-06 Score=60.23 Aligned_cols=91 Identities=13% Similarity=0.080 Sum_probs=76.0
Q ss_pred CCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCC----------
Q 044402 17 TKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCP---------- 86 (127)
Q Consensus 17 ~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~---------- 86 (127)
.++|..|.-|+++|+.|..+.+.++.++|++++... ..+|-.|+..|.++.+++++..-...
T Consensus 53 lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~ 124 (822)
T KOG3609|consen 53 LNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDAN 124 (822)
T ss_pred cchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHHHHHHHHHHHHHHHhcccccchhccccccC
Confidence 457779999999999999999999999999986543 35899999999999999998863333
Q ss_pred CcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 87 MFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 87 ~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
...-..+-||+.+|+..++.|+++.|+.+
T Consensus 125 ~~~ft~ditPliLAAh~NnyEil~~Ll~k 153 (822)
T KOG3609|consen 125 SPHFTPDITPLMLAAHLNNFEILQCLLTR 153 (822)
T ss_pred cccCCCCccHHHHHHHhcchHHHHHHHHc
Confidence 12234467999999999999999999988
No 112
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.26 E-value=7.5e-07 Score=64.22 Aligned_cols=78 Identities=15% Similarity=0.264 Sum_probs=68.8
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.|+||.|+.. +..++++|.+|..|++|+|.+...|+......++++++++. ..+..+.+++.+|....
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~-a~~~~~~~~l~~a~~~~ 733 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPN-AFDPDGKLPLDIAMEAA 733 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhcccccccc-ccCccCcchhhHHhhhc
Confidence 368999999888 67889999999999999999999999999999999999996 88999999999997776
Q ss_pred chHHHHHH
Q 044402 72 HVKVMVEM 79 (127)
Q Consensus 72 ~~~~~~~l 79 (127)
+.+.+-++
T Consensus 734 ~~d~~~l~ 741 (785)
T KOG0521|consen 734 NADIVLLL 741 (785)
T ss_pred cccHHHHH
Confidence 66665444
No 113
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.25 E-value=8.6e-07 Score=64.34 Aligned_cols=93 Identities=14% Similarity=0.184 Sum_probs=75.7
Q ss_pred ccccCCchhHHHHHhcCCHHHHHHHHHh-cCCCcccccccCCChhhhhhhcCchHHHHHHHh-ccCCCCcccCCCCcHHH
Q 044402 21 TKDWNENIPLYFATSNTYIRGVCFLLEL-NGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLK-KQHCPMFVTNSGYNILH 98 (127)
Q Consensus 21 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~t~l~ 98 (127)
.....|.+.+|.++..++.-.++.+++- +.... ..+..+...+|+ |..++++.+.+++. .|..++++|..|+||||
T Consensus 569 ~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~-eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~ 646 (975)
T KOG0520|consen 569 SVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDL-ELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLH 646 (975)
T ss_pred cCCCcchHHHHHHHHHhHHHHHHHHhcccccCch-hhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccc
Confidence 3456688999999999999999998885 55543 567778888888 56667776665544 47788999999999999
Q ss_pred HHHhcCcHHHHHHHHHh
Q 044402 99 FVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 99 ~a~~~~~~~~~~~Ll~~ 115 (127)
||+..|+..++..|++.
T Consensus 647 wAa~~G~e~l~a~l~~l 663 (975)
T KOG0520|consen 647 WAAFRGREKLVASLIEL 663 (975)
T ss_pred hHhhcCHHHHHHHHHHh
Confidence 99999999999999965
No 114
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.84 E-value=5.2e-05 Score=51.70 Aligned_cols=63 Identities=16% Similarity=0.069 Sum_probs=47.1
Q ss_pred HHHHHHHHHhcCCCcc-----cccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHH
Q 044402 39 IRGVCFLLELNGHSAI-----EHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVV 101 (127)
Q Consensus 39 ~~~~~~ll~~~~~~~~-----~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 101 (127)
...+++|.+++...+. ..+..-.|+||+|+..|..+++.+|++.|+|+..+|..|.||+.++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 4466777776655421 23344678888888888888888888888888888888888888776
No 115
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.71 E-value=7.2e-05 Score=53.83 Aligned_cols=81 Identities=20% Similarity=0.183 Sum_probs=61.3
Q ss_pred CcchHHHHHHH-------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCC---------cccccccCCChhh
Q 044402 2 GNTAFHESLFI-------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHS---------AIEHNIKTLYPIH 65 (127)
Q Consensus 2 g~~~lh~a~~~-------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~---------~~~~~~~~~t~l~ 65 (127)
|+++|+.|..+ ++-..+... ..+|.+|...+..+.++.++.....- .......+.||+.
T Consensus 62 Gr~al~iai~nenle~~eLLl~~~~~~-----gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPli 136 (822)
T KOG3609|consen 62 GRLALHIAIDNENLELQELLLDTSSEE-----GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLM 136 (822)
T ss_pred hhhceecccccccHHHHHHHhcCcccc-----chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHH
Confidence 67788888777 222222222 35899999999999999999865432 1134456889999
Q ss_pred hhhhcCchHHHHHHHhccCCCC
Q 044402 66 LACKNGHVKVMVEMLKKQHCPM 87 (127)
Q Consensus 66 ~a~~~~~~~~~~~l~~~~~~~~ 87 (127)
+||..+++|++++|+.+|+++.
T Consensus 137 LAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 137 LAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred HHHHhcchHHHHHHHHcCCCCC
Confidence 9999999999999999998883
No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.64 E-value=0.00015 Score=29.24 Aligned_cols=25 Identities=28% Similarity=0.359 Sum_probs=14.7
Q ss_pred CchhHHHHHhcCCHHHHHHHHHhcC
Q 044402 26 ENIPLYFATSNTYIRGVCFLLELNG 50 (127)
Q Consensus 26 g~t~l~~a~~~~~~~~~~~ll~~~~ 50 (127)
|.+|+|+++..++.+++++|++.+.
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~ 26 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGA 26 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4556666666666666666665544
No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.62 E-value=0.00014 Score=29.36 Aligned_cols=24 Identities=38% Similarity=0.614 Sum_probs=12.2
Q ss_pred CChhhhhhhcCchHHHHHHHhccC
Q 044402 61 LYPIHLACKNGHVKVMVEMLKKQH 84 (127)
Q Consensus 61 ~t~l~~a~~~~~~~~~~~l~~~~~ 84 (127)
.+|+++++..++.+++++|++.+.
T Consensus 3 ~~~l~~~~~~~~~~~~~~ll~~~~ 26 (30)
T smart00248 3 RTPLHLAAENGNLEVVKLLLDKGA 26 (30)
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC
Confidence 445555555555555555555443
No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.50 E-value=0.00025 Score=48.55 Aligned_cols=46 Identities=17% Similarity=0.200 Sum_probs=42.0
Q ss_pred cccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhh
Q 044402 22 KDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLAC 68 (127)
Q Consensus 22 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~ 68 (127)
.+....|+||||+..|.-+++.+||+.++++. .++..|.||..++.
T Consensus 426 ~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~-~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 426 NDYLTSTFLHYAAAQGARKCVKYFLEEGCDPS-TKDGAGRTPYSLSA 471 (591)
T ss_pred cccccchHHHHHHhcchHHHHHHHHHhcCCch-hcccCCCCcccccc
Confidence 55567799999999999999999999999996 89999999999987
No 119
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=94.91 E-value=0.33 Score=30.70 Aligned_cols=93 Identities=18% Similarity=0.249 Sum_probs=63.1
Q ss_pred CchhHHHHHhcCCHHHHHHHHHhcCCCc--ccccccCCChhhhhhh--cCchHHHHHHHhccCC-CC--c-ccCCCCcHH
Q 044402 26 ENIPLYFATSNTYIRGVCFLLELNGHSA--IEHNIKTLYPIHLACK--NGHVKVMVEMLKKQHC-PM--F-VTNSGYNIL 97 (127)
Q Consensus 26 g~t~l~~a~~~~~~~~~~~ll~~~~~~~--~~~~~~~~t~l~~a~~--~~~~~~~~~l~~~~~~-~~--~-~~~~~~t~l 97 (127)
-.+++-++...+..+++-+|+++-.--. -.....+.--+.++.. .-+..++++++++|.- ++ . +-+.|+|-|
T Consensus 179 A~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtML 258 (284)
T PF06128_consen 179 AHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTML 258 (284)
T ss_pred HHHHHHHHhcccHHHHHHHHHhhcceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHH
Confidence 3467888888888899999988643210 0111222223333322 3557788999998743 32 2 347899999
Q ss_pred HHHHhcCcHHHHHHHHHhccc
Q 044402 98 HFVVKNGHVNMVKAIIKISET 118 (127)
Q Consensus 98 ~~a~~~~~~~~~~~Ll~~~~~ 118 (127)
.-|.+.+..+++.+|+++|.+
T Consensus 259 DNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 259 DNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred HhHHhcCcHHHHHHHHHcCcc
Confidence 999999999999999998654
No 120
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=94.46 E-value=0.13 Score=26.50 Aligned_cols=47 Identities=13% Similarity=0.048 Sum_probs=39.1
Q ss_pred hhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhc
Q 044402 28 IPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKK 82 (127)
Q Consensus 28 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~ 82 (127)
..+.+|..+|+.++++..++.+... ...+..|+...+-++++||++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~~~~--------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKNKPD--------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhccH--------HHHHHHHHHHhhHHHHHHHHHh
Confidence 5688999999999999998764221 3579999999999999999986
No 121
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=92.18 E-value=0.48 Score=24.39 Aligned_cols=49 Identities=18% Similarity=0.283 Sum_probs=39.9
Q ss_pred CChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 61 LYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 61 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
...+..|...|+.|+++..++.+ .+ ....+..|+..-+-+++++|++.-
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~------~~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KP------DNDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-cc------HHHHHHHHHHHhhHHHHHHHHHhc
Confidence 35678999999999999998753 11 156799999999999999999873
No 122
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=91.99 E-value=0.56 Score=29.76 Aligned_cols=51 Identities=8% Similarity=-0.030 Sum_probs=40.6
Q ss_pred cCCHHHHHHHHHhcCCCcc---cccccCCChhhhhhhcCchHHHHHHHhccCCC
Q 044402 36 NTYIRGVCFLLELNGHSAI---EHNIKTLYPIHLACKNGHVKVMVEMLKKQHCP 86 (127)
Q Consensus 36 ~~~~~~~~~ll~~~~~~~~---~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~ 86 (127)
..+..++++++++|--..+ .+-..|.|.|--|.+.++.+++.+|+..|+-.
T Consensus 227 ~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 227 SASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred CCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 3367788999998843222 34567999999999999999999999999754
No 123
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=87.85 E-value=1.6 Score=26.76 Aligned_cols=45 Identities=22% Similarity=0.270 Sum_probs=26.7
Q ss_pred hhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHH
Q 044402 64 IHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIK 114 (127)
Q Consensus 64 l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~ 114 (127)
|..|+..|-...+.-.+.+|.+++. +.|..|+..++..+..+++.
T Consensus 147 l~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 3455555555555555555544432 56777777777777666653
No 124
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=86.25 E-value=4.2 Score=25.03 Aligned_cols=47 Identities=15% Similarity=0.080 Sum_probs=21.9
Q ss_pred HHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHH
Q 044402 30 LYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEML 80 (127)
Q Consensus 30 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~ 80 (127)
+..|+.++-++++++.-+..... ....++.+-.||+..+.++++|+-
T Consensus 50 l~HAVk~nmL~ILqkyke~L~~~----~~~~q~LFElAC~~qkydiV~WI~ 96 (192)
T PF03158_consen 50 LYHAVKYNMLSILQKYKEDLENE----RYLNQELFELACEEQKYDIVKWIG 96 (192)
T ss_pred HHHHHHcCcHHHHHHHHHHhhcc----hhHHHHHHHHHHHHccccHHHHHh
Confidence 44455555555554443332211 123344555555555555555553
No 125
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=73.65 E-value=0.61 Score=32.96 Aligned_cols=73 Identities=8% Similarity=-0.110 Sum_probs=51.6
Q ss_pred cCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCC-hhhhhhhcCchHHHHHHHhccCCCCcccCCCCcH
Q 044402 24 WNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLY-PIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNI 96 (127)
Q Consensus 24 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t-~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~ 96 (127)
-+.+||++.|+..|.++.+.+++..+.+..+..-..|.. ...+-...|..+.+..|...+...+.+|..|.-+
T Consensus 56 ~~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~~C~~~g~s~~~~e~~~hL~~~k~~~~~tda~g~~~ 129 (528)
T KOG1595|consen 56 LNQRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDEHCAVLGRSVGDTERTYHLRYYKTLPCVTDARGNCV 129 (528)
T ss_pred hccccccchhhhcCccccccceeecchhhccccCCCCcccchhcccccCCcceeEeccccccccCccccCCCcc
Confidence 346799999999999999999887665543222333444 3334444577888888888888888888777755
No 126
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=49.97 E-value=22 Score=22.88 Aligned_cols=40 Identities=10% Similarity=0.003 Sum_probs=25.6
Q ss_pred HHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCC
Q 044402 46 LELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCP 86 (127)
Q Consensus 46 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~ 86 (127)
++.|+.=+ ..+....|+=.+|...++.+.-+.|++.|+..
T Consensus 2 le~ga~wn-~id~~n~t~gd~a~ern~~rly~~lv~~gv~S 41 (271)
T KOG1709|consen 2 LEYGAGWN-FIDYENKTVGDLALERNQSRLYRRLVEAGVPS 41 (271)
T ss_pred cccCCCcc-ccChhhCCchHHHHHccHHHHHHHHHHcCCch
Confidence 34444332 45566667777777777777777777776555
No 127
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=48.29 E-value=28 Score=22.42 Aligned_cols=39 Identities=18% Similarity=0.076 Sum_probs=34.4
Q ss_pred hhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCC
Q 044402 14 NRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHS 52 (127)
Q Consensus 14 ~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~ 52 (127)
..|+..|..|..+.|+=-.|.+.++.+..+.|++.|...
T Consensus 3 e~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~S 41 (271)
T KOG1709|consen 3 EYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVPS 41 (271)
T ss_pred ccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCch
Confidence 457888999999999999999999999999999988653
No 128
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=44.98 E-value=7.2 Score=28.45 Aligned_cols=37 Identities=16% Similarity=0.377 Sum_probs=20.4
Q ss_pred HHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhc
Q 044402 45 LLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKK 82 (127)
Q Consensus 45 ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~ 82 (127)
+.+.+..+. .++..+.+|+|+++..|..++.+.+...
T Consensus 415 lik~~~~~~-~~d~f~~~p~~~~~~sgdp~~~~~~~~~ 451 (605)
T KOG3836|consen 415 LIKKGAHPN-DDDKFGFTPLHIPQISGDPRIIQLLLNC 451 (605)
T ss_pred eecccCccc-hhcccccccccccCCCCCHHHhhhhhhh
Confidence 333444443 4555566666666666666666555554
No 129
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=42.24 E-value=28 Score=21.97 Aligned_cols=44 Identities=18% Similarity=0.137 Sum_probs=29.7
Q ss_pred CCChhhhhhhcCchHHH-HHHHhccCCC----CcccCCCCcHHHHHHhc
Q 044402 60 TLYPIHLACKNGHVKVM-VEMLKKQHCP----MFVTNSGYNILHFVVKN 103 (127)
Q Consensus 60 ~~t~l~~a~~~~~~~~~-~~l~~~~~~~----~~~~~~~~t~l~~a~~~ 103 (127)
-..|||-++..+..+++ -|+++..+.+ +-.|.+|..+|.+|...
T Consensus 222 Te~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~ 270 (280)
T KOG4591|consen 222 TENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR 270 (280)
T ss_pred CcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence 34588888888777765 4566655444 45567788888887754
No 130
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=33.67 E-value=19 Score=26.51 Aligned_cols=38 Identities=18% Similarity=0.059 Sum_probs=31.7
Q ss_pred hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcC
Q 044402 13 INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNG 50 (127)
Q Consensus 13 l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~ 50 (127)
+.++..++.+|..+.+|+|+++..+..++.+.++....
T Consensus 416 ik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~ 453 (605)
T KOG3836|consen 416 IKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKV 453 (605)
T ss_pred ecccCccchhcccccccccccCCCCCHHHhhhhhhhhh
Confidence 34567788999999999999999999999888766443
No 131
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=23.11 E-value=49 Score=16.17 Aligned_cols=9 Identities=11% Similarity=0.372 Sum_probs=4.1
Q ss_pred HHHHHHHHh
Q 044402 107 NMVKAIIKI 115 (127)
Q Consensus 107 ~~~~~Ll~~ 115 (127)
+++.||+++
T Consensus 4 ~iV~YLv~n 12 (57)
T PF05952_consen 4 EIVNYLVQN 12 (57)
T ss_pred HHHHHHHHC
Confidence 344444444
Done!