Query 044402
Match_columns 127
No_of_seqs 115 out of 1558
Neff 11.3
Searched_HMMs 29240
Date Mon Mar 25 04:31:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044402.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044402hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 8.3E-33 2.8E-37 164.1 13.2 117 1-118 36-162 (169)
2 1d9s_A Cyclin-dependent kinase 100.0 2E-30 7E-35 148.7 9.8 114 1-116 11-134 (136)
3 4gpm_A Engineered protein OR26 100.0 1.7E-29 5.8E-34 149.8 13.2 117 4-121 6-132 (169)
4 2jab_A H10-2-G3; HER2, darpin, 100.0 1.1E-29 3.6E-34 145.7 11.7 114 2-116 14-136 (136)
5 1n0r_A 4ANK, 4 ankyrin repeats 100.0 5.6E-29 1.9E-33 140.4 13.7 115 1-116 1-124 (126)
6 3v31_A Ankyrin repeat family A 100.0 6.3E-29 2.2E-33 146.7 13.2 118 1-119 2-129 (167)
7 2rfm_A Putative ankyrin repeat 100.0 1E-28 3.4E-33 148.8 13.9 119 1-120 34-162 (192)
8 3v30_A DNA-binding protein rfx 100.0 9.1E-29 3.1E-33 146.7 12.7 114 1-115 35-157 (172)
9 4b93_B Ankyrin repeat domain-c 100.0 8.4E-29 2.9E-33 156.3 13.1 120 1-121 85-214 (269)
10 1awc_B Protein (GA binding pro 100.0 1.5E-28 5.2E-33 143.3 13.0 111 3-115 3-122 (153)
11 3v31_A Ankyrin repeat family A 100.0 1.2E-28 4E-33 145.5 12.7 118 1-119 35-162 (167)
12 1bi7_B P16INK4A, MTS1, multipl 100.0 2E-29 6.9E-34 147.6 8.5 118 1-120 11-139 (156)
13 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.6E-28 9E-33 144.4 13.2 117 2-119 14-140 (169)
14 2rfm_A Putative ankyrin repeat 100.0 2.8E-28 9.7E-33 146.8 12.9 115 1-116 67-190 (192)
15 3twr_A Tankyrase-2; ankyrin re 100.0 1.3E-28 4.5E-33 145.1 10.4 118 2-120 8-136 (165)
16 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.2E-28 1.1E-32 142.9 10.6 111 3-115 6-125 (162)
17 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.5E-27 5.2E-32 141.2 13.1 114 1-115 46-168 (169)
18 3f6q_A Integrin-linked protein 100.0 4.2E-28 1.5E-32 144.7 10.7 113 2-115 5-127 (179)
19 1bd8_A P19INK4D CDK4/6 inhibit 100.0 5.9E-28 2E-32 141.0 11.1 114 2-117 2-125 (156)
20 3c5r_A BARD-1, BRCA1-associate 100.0 9.5E-29 3.3E-33 141.8 7.3 114 1-115 9-131 (137)
21 3v30_A DNA-binding protein rfx 100.0 1.6E-27 5.6E-32 141.2 12.5 118 2-120 2-130 (172)
22 3t8k_A Uncharacterized protein 100.0 3.9E-28 1.4E-32 145.9 9.5 113 2-115 38-176 (186)
23 2vge_A RELA-associated inhibit 100.0 4.7E-28 1.6E-32 149.8 9.9 119 2-121 21-152 (229)
24 2rfa_A Transient receptor pote 100.0 2.8E-27 9.5E-32 146.0 13.2 120 1-120 2-149 (232)
25 3f6q_A Integrin-linked protein 100.0 6.9E-27 2.4E-31 139.4 13.9 119 1-120 38-166 (179)
26 2etb_A Transient receptor pote 100.0 1E-27 3.5E-32 150.0 10.5 114 2-116 90-244 (256)
27 3aji_A 26S proteasome non-ATPa 100.0 7.9E-27 2.7E-31 143.8 14.2 113 2-115 73-194 (231)
28 1awc_B Protein (GA binding pro 100.0 3.5E-27 1.2E-31 137.5 11.9 111 1-112 33-152 (153)
29 3jxi_A Vanilloid receptor-rela 100.0 9.3E-28 3.2E-32 150.4 10.1 115 1-116 92-248 (260)
30 2dzn_A Probable 26S proteasome 100.0 8.7E-27 3E-31 143.3 14.3 118 1-119 71-202 (228)
31 1yyh_A HN1;, notch 1, ankyrin 100.0 4.1E-27 1.4E-31 147.2 12.9 99 15-114 146-244 (253)
32 3twr_A Tankyrase-2; ankyrin re 99.9 4.9E-27 1.7E-31 138.3 12.5 114 1-116 41-163 (165)
33 2f8y_A Notch homolog 1, transl 99.9 8.5E-27 2.9E-31 143.0 14.0 113 2-115 92-213 (223)
34 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.8E-27 9.7E-32 138.9 11.3 115 1-116 37-160 (162)
35 1ikn_D Protein (I-kappa-B-alph 99.9 4E-27 1.4E-31 145.7 12.5 114 2-115 45-173 (236)
36 1bd8_A P19INK4D CDK4/6 inhibit 99.9 3.6E-27 1.2E-31 137.7 11.5 112 1-115 35-155 (156)
37 4hbd_A KN motif and ankyrin re 99.9 3.3E-27 1.1E-31 149.5 12.0 101 15-116 172-273 (276)
38 1yyh_A HN1;, notch 1, ankyrin 99.9 4.8E-27 1.6E-31 146.9 12.3 97 18-115 116-212 (253)
39 3aaa_C Myotrophin, protein V-1 99.9 8E-28 2.7E-32 135.7 8.0 107 1-108 6-121 (123)
40 1oy3_D Transcription factor in 99.9 4.7E-27 1.6E-31 148.3 12.2 103 18-121 150-254 (282)
41 2xai_A ASB-9, ankyrin repeat a 99.9 9.8E-27 3.4E-31 146.1 13.5 99 15-115 58-156 (261)
42 3ehr_A Osteoclast-stimulating 99.9 6.4E-28 2.2E-32 148.2 7.8 114 2-116 73-196 (222)
43 3hra_A Ankyrin repeat family p 99.9 2.1E-26 7E-31 139.3 14.3 118 2-119 39-172 (201)
44 3aji_A 26S proteasome non-ATPa 99.9 1.5E-26 5.1E-31 142.6 13.9 119 1-120 39-167 (231)
45 2f8y_A Notch homolog 1, transl 99.9 1.4E-26 4.9E-31 142.0 13.6 114 2-115 25-147 (223)
46 3deo_A Signal recognition part 99.9 2.8E-27 9.6E-32 141.7 10.1 101 2-103 44-153 (183)
47 3ljn_A Hypothetical protein; a 99.9 9E-27 3.1E-31 152.1 13.2 115 1-116 137-267 (364)
48 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.1E-27 7.3E-32 147.5 9.5 100 15-115 59-161 (239)
49 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.3E-27 7.7E-32 147.4 9.5 120 1-122 4-133 (239)
50 2xai_A ASB-9, ankyrin repeat a 99.9 2E-26 6.9E-31 144.7 13.8 118 1-120 2-129 (261)
51 2rfa_A Transient receptor pote 99.9 1.3E-26 4.4E-31 143.0 12.6 113 2-115 37-180 (232)
52 2pnn_A Transient receptor pote 99.9 4.1E-27 1.4E-31 148.5 10.5 116 1-117 100-257 (273)
53 1oy3_D Transcription factor in 99.9 9.4E-27 3.2E-31 146.9 12.0 60 56-115 154-214 (282)
54 3ui2_A Signal recognition part 99.9 3.8E-27 1.3E-31 146.9 10.0 113 2-115 45-182 (244)
55 3hra_A Ankyrin repeat family p 99.9 1.9E-26 6.3E-31 139.5 12.7 115 1-116 71-201 (201)
56 4b93_B Ankyrin repeat domain-c 99.9 4E-27 1.4E-31 148.7 10.0 119 2-121 52-181 (269)
57 1s70_B 130 kDa myosin-binding 99.9 2.8E-26 9.6E-31 146.0 13.4 120 1-120 72-260 (299)
58 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.7E-26 5.8E-31 124.4 10.6 91 25-116 1-91 (93)
59 2etb_A Transient receptor pote 99.9 8.6E-27 3E-31 145.8 10.3 120 1-120 1-167 (256)
60 4hbd_A KN motif and ankyrin re 99.9 1.2E-26 4.1E-31 146.9 10.9 119 1-120 110-245 (276)
61 1ikn_D Protein (I-kappa-B-alph 99.9 1.7E-26 5.8E-31 142.9 11.2 116 1-117 77-208 (236)
62 1k1a_A B-cell lymphoma 3-encod 99.9 6.5E-26 2.2E-30 140.3 13.4 117 2-119 79-210 (241)
63 3d9h_A CDNA FLJ77766, highly s 99.9 4.9E-26 1.7E-30 144.6 13.0 99 15-115 114-212 (285)
64 1n11_A Ankyrin; clathrin, BAND 99.9 4.4E-26 1.5E-30 151.8 13.2 114 1-115 13-135 (437)
65 3b7b_A Euchromatic histone-lys 99.9 7.2E-26 2.5E-30 140.0 13.3 113 2-115 77-199 (237)
66 3kea_A K1L; tropism, ANK repea 99.9 1.2E-26 4.2E-31 147.4 9.6 111 2-115 31-151 (285)
67 3b7b_A Euchromatic histone-lys 99.9 1.6E-25 5.4E-30 138.4 14.1 113 2-115 11-133 (237)
68 3d9h_A CDNA FLJ77766, highly s 99.9 8.3E-26 2.8E-30 143.6 13.0 117 1-119 58-184 (285)
69 1n11_A Ankyrin; clathrin, BAND 99.9 8E-26 2.7E-30 150.6 13.3 113 2-115 245-366 (437)
70 2dzn_A Probable 26S proteasome 99.9 9.7E-26 3.3E-30 138.6 12.7 94 22-116 68-163 (228)
71 1k1a_A B-cell lymphoma 3-encod 99.9 2.2E-25 7.5E-30 137.9 13.8 113 2-115 9-138 (241)
72 3jxi_A Vanilloid receptor-rela 99.9 9.2E-26 3.1E-30 141.3 11.5 117 1-118 45-211 (260)
73 1wdy_A 2-5A-dependent ribonucl 99.9 6.2E-25 2.1E-29 138.5 14.6 118 2-120 148-281 (285)
74 3c5r_A BARD-1, BRCA1-associate 99.9 2E-25 6.8E-30 127.9 11.2 103 16-120 1-104 (137)
75 1d9s_A Cyclin-dependent kinase 99.9 2.3E-25 7.7E-30 127.6 11.3 104 16-121 2-107 (136)
76 3kea_A K1L; tropism, ANK repea 99.9 6.5E-26 2.2E-30 144.1 9.7 112 2-115 62-183 (285)
77 1sw6_A Regulatory protein SWI6 99.9 4.7E-26 1.6E-30 147.2 9.2 120 1-121 130-312 (327)
78 1dcq_A PYK2-associated protein 99.9 3.8E-25 1.3E-29 140.2 13.0 113 4-117 132-262 (278)
79 2pnn_A Transient receptor pote 99.9 1.9E-25 6.6E-30 140.9 11.5 118 1-119 53-220 (273)
80 3utm_A Tankyrase-1; tankyrase, 99.9 5.3E-25 1.8E-29 142.4 13.7 59 57-115 244-302 (351)
81 3utm_A Tankyrase-1; tankyrase, 99.9 4.5E-25 1.5E-29 142.7 12.7 117 2-119 24-151 (351)
82 3lvq_E ARF-GAP with SH3 domain 99.9 5.2E-25 1.8E-29 149.1 13.3 115 4-119 134-267 (497)
83 3ljn_A Hypothetical protein; a 99.9 1.7E-25 5.8E-30 146.1 10.3 99 22-121 134-240 (364)
84 2fo1_E LIN-12 protein; beta-ba 99.9 4.8E-25 1.6E-29 144.6 12.5 114 1-115 234-368 (373)
85 1wdy_A 2-5A-dependent ribonucl 99.9 5.4E-25 1.9E-29 138.8 12.1 118 2-120 5-133 (285)
86 3eu9_A Huntingtin-interacting 99.9 1.1E-24 3.9E-29 134.4 12.8 119 1-119 8-136 (240)
87 1s70_B 130 kDa myosin-binding 99.9 3.1E-25 1.1E-29 141.2 9.7 113 2-115 40-161 (299)
88 2b0o_E UPLC1; arfgap, structur 99.9 1.1E-24 3.7E-29 139.5 12.0 112 4-116 153-282 (301)
89 3jue_A Arfgap with coiled-coil 99.9 4.8E-25 1.6E-29 144.4 10.4 113 3-116 200-324 (368)
90 2fo1_E LIN-12 protein; beta-ba 99.9 6.5E-25 2.2E-29 144.0 11.1 119 1-120 124-266 (373)
91 2l6b_A NR1C; ankyrin, consensu 99.9 6.1E-25 2.1E-29 122.4 8.8 101 21-122 4-105 (115)
92 4g8k_A 2-5A-dependent ribonucl 99.9 8.2E-24 2.8E-28 136.9 13.4 113 2-115 168-295 (337)
93 3aaa_C Myotrophin, protein V-1 99.9 6.4E-24 2.2E-28 119.6 10.8 99 22-121 3-102 (123)
94 3eu9_A Huntingtin-interacting 99.9 1.2E-23 4E-28 129.9 12.9 113 2-115 76-199 (240)
95 4g8k_A 2-5A-dependent ribonucl 99.9 1.1E-23 3.7E-28 136.3 12.9 115 1-121 201-330 (337)
96 1n0q_A 3ANK, 3 ankyrin repeats 99.9 8.4E-24 2.9E-28 113.8 9.9 84 1-85 1-93 (93)
97 3t8k_A Uncharacterized protein 99.9 1E-24 3.6E-29 131.0 6.0 118 2-121 6-150 (186)
98 2zgd_A 3 repeat synthetic anky 99.9 1.8E-23 6E-28 115.8 9.4 92 20-112 18-109 (110)
99 2vge_A RELA-associated inhibit 99.9 3.9E-23 1.3E-27 127.7 11.2 109 13-122 5-117 (229)
100 2jab_A H10-2-G3; HER2, darpin, 99.9 2.9E-23 1E-27 118.8 9.5 98 22-120 10-108 (136)
101 2l6b_A NR1C; ankyrin, consensu 99.9 1.2E-23 4.2E-28 117.1 7.4 96 1-97 8-112 (115)
102 1bi7_B P16INK4A, MTS1, multipl 99.9 8.1E-23 2.8E-27 119.4 9.8 100 20-121 6-107 (156)
103 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.1E-22 7.1E-27 113.3 10.9 95 25-120 1-96 (126)
104 3ehr_A Osteoclast-stimulating 99.9 8.2E-23 2.8E-27 125.4 9.4 99 22-121 69-169 (222)
105 3deo_A Signal recognition part 99.9 8E-23 2.7E-27 122.3 8.6 98 22-121 40-139 (183)
106 1sw6_A Regulatory protein SWI6 99.9 1.4E-22 4.8E-27 130.9 8.6 102 13-115 117-227 (327)
107 2aja_A Ankyrin repeat family p 99.9 4.4E-24 1.5E-28 140.2 1.4 114 2-116 92-222 (376)
108 3ui2_A Signal recognition part 99.9 2.2E-22 7.7E-27 125.3 8.0 96 23-120 42-139 (244)
109 2b0o_E UPLC1; arfgap, structur 99.9 7.8E-23 2.7E-27 130.9 5.8 99 1-106 189-299 (301)
110 3lvq_E ARF-GAP with SH3 domain 99.8 1.3E-20 4.4E-25 127.7 8.8 97 1-98 170-278 (497)
111 1dcq_A PYK2-associated protein 99.8 5.9E-20 2E-24 116.4 9.6 85 1-86 168-264 (278)
112 2aja_A Ankyrin repeat family p 99.8 2E-22 7E-27 132.3 -3.3 105 2-115 128-247 (376)
113 3jue_A Arfgap with coiled-coil 99.8 2.8E-19 9.6E-24 117.2 9.8 99 22-121 195-297 (368)
114 2zgd_A 3 repeat synthetic anky 99.8 2.1E-19 7.1E-24 99.3 7.8 78 1-79 23-109 (110)
115 1gp8_A Protein (scaffolding pr 69.8 5.3 0.00018 17.1 2.3 19 29-47 16-34 (40)
116 3zrh_A Ubiquitin thioesterase 41.2 84 0.0029 21.5 5.5 48 34-81 30-90 (454)
117 4asn_A TUBR; transcription, tu 20.1 53 0.0018 16.6 1.4 17 72-88 16-32 (101)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=8.3e-33 Score=164.06 Aligned_cols=117 Identities=22% Similarity=0.237 Sum_probs=107.5
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|+||||+|+.. +..+++++.+|..|.||||+|+..++.+++++|++.|++++ .++..|+||||+|+..|
T Consensus 36 ~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn-~~d~~G~TpLh~A~~~g 114 (169)
T 4gpm_A 36 DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN-AKDSDGRTPLHHAAENG 114 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCC-CCCCCCCCHHHHHHHcC
Confidence 488999999888 66789999999999999999999999999999999999986 78899999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SET 118 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~ 118 (127)
+.+++++|++.|++++.+|..|+|||++|+..|+.+++++|+++ +++
T Consensus 115 ~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 115 HKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 99999999999999999999999999999999999999999988 443
No 2
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=2e-30 Score=148.71 Aligned_cols=114 Identities=10% Similarity=0.080 Sum_probs=107.6
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCccccccc-CCChhhhhhhc
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIK-TLYPIHLACKN 70 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~t~l~~a~~~ 70 (127)
.|.||||.|+.. +..+.+++.+|..|.||||+|+. ++.+++++|++.++++. ..+.. |+||||+|+..
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-~~~~~~g~t~L~~A~~~ 88 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPN-CADPATLTRPVHDAARE 88 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSS-CCBTTTTBCHHHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCC-CcCCCCCCCHHHHHHHc
Confidence 478999999988 56788999999999999999999 99999999999999986 67888 99999999999
Q ss_pred CchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 71 GHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 71 ~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++++
T Consensus 89 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 89 GFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp TCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999874
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.7e-29 Score=149.81 Aligned_cols=117 Identities=24% Similarity=0.273 Sum_probs=109.0
Q ss_pred chHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchH
Q 044402 4 TAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVK 74 (127)
Q Consensus 4 ~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 74 (127)
++|+.||+. +..|++++.+|..|.||||+|+..++.+++++|++.|+++. .++..|+||||+|+..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~-~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVN-AKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchh-hhccCCCCHHHHHHHcCCHH
Confidence 468888887 67789999999999999999999999999999999999996 78999999999999999999
Q ss_pred HHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccccc
Q 044402 75 VMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 75 ~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
++++|++.|++++.+|..|+||||+|+..|+.+++++|+++ .+++..
T Consensus 85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~ 132 (169)
T 4gpm_A 85 VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTS 132 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 99999999999999999999999999999999999999998 555543
No 4
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.97 E-value=1.1e-29 Score=145.72 Aligned_cols=114 Identities=20% Similarity=0.230 Sum_probs=107.1
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.||||+|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.++++. ..+..|.||||+|+..++
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~ 92 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN-AVDAIGFTPLHLAAFIGH 92 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHcCC
Confidence 56899999998 56788999999999999999999999999999999999986 788899999999999999
Q ss_pred hHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 73 VKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
.+++++|++.|++++.+|..|.|||++|+..|+.+++++|++.|
T Consensus 93 ~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 93 LEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999753
No 5
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.97 E-value=5.6e-29 Score=140.45 Aligned_cols=115 Identities=27% Similarity=0.377 Sum_probs=109.0
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+|.||||.|+.. +..+.+++..|..|.||||+|+..++.+++++|++.+.++. ..+..|.||||+|+..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCcHHHHHHHcC
Confidence 589999999988 56788999999999999999999999999999999999986 78889999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
+.+++++|++.|++++.++..|.|||++|+..++.+++++|++++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999874
No 6
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=6.3e-29 Score=146.70 Aligned_cols=118 Identities=19% Similarity=0.205 Sum_probs=92.6
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+|.||||.|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.++++. ..+..|.||||+|+..+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ-LLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHcC
Confidence 467888888877 45567777788888888888888888888888888877775 56777888888888888
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~ 119 (127)
+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++ .+++
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 129 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPT 129 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 88888888888888888888888888888888888888888877 4443
No 7
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1e-28 Score=148.81 Aligned_cols=119 Identities=15% Similarity=0.164 Sum_probs=105.0
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.||||.|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.++++. ..+..|.||||+|+..+
T Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 112 (192)
T 2rfm_A 34 YNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN-TKDFSGKTPLMWSIIFG 112 (192)
T ss_dssp TCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHcC
Confidence 478999999988 55678888999999999999999999999999999998885 67888999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++ .+++.
T Consensus 113 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 162 (192)
T 2rfm_A 113 YSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA 162 (192)
T ss_dssp CHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999999999999999999999988 44443
No 8
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=9.1e-29 Score=146.65 Aligned_cols=114 Identities=18% Similarity=0.145 Sum_probs=87.7
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.||||+|+.. +..+++++.+|..|.||||+|+..++.+++++|++.+.++. ..+..|+||||+|+..+
T Consensus 35 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 113 (172)
T 3v30_A 35 RGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDIN-IYDWNGGTPLLYAVRGN 113 (172)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcC
Confidence 367777777776 45667777777777788888888888888888877777775 56777778888888888
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+.+++++|++.|++++.++..|.|||++|+..|+.+++++|+++
T Consensus 114 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (172)
T 3v30_A 114 HVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENH 157 (172)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHH
Confidence 88888888887777777777778888888888888888777776
No 9
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=8.4e-29 Score=156.35 Aligned_cols=120 Identities=19% Similarity=0.305 Sum_probs=106.2
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+|+||||+|+.. +..+++++.++..|.||+++|+..++.+++++|++.|+++. ..+..|+||||+|+..|
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n-~~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPN-KKDLSGNTPLIYACSGG 163 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHCC
Confidence 478899998887 55678888888888899999999999999999999888886 78889999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
+.+++++|++.|++++.++..|+||||+|+..|+.+++++|+++ .+++..
T Consensus 164 ~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~ 214 (269)
T 4b93_B 164 HHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVL 214 (269)
T ss_dssp CGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCC
T ss_pred CHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 99999999999999999999999999999999999999999998 555543
No 10
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=1.5e-28 Score=143.33 Aligned_cols=111 Identities=19% Similarity=0.258 Sum_probs=68.3
Q ss_pred cchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCch
Q 044402 3 NTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHV 73 (127)
Q Consensus 3 ~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~ 73 (127)
.+|||.|+.. +..+.+++ .|..|.||||+|+..++.+++++|++.+.++. ..+..|+||||+|+..++.
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD-ARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CCCTTCCCHHHHHHHHTCH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcChH
Confidence 4566666665 33444443 35566666666666666666666666666554 4555566666666666666
Q ss_pred HHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 74 KVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 74 ~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+++++|++.|++++.++..|.||||+|+..|+.+++++|+++
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 122 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 666666666666666666666666666666666666666665
No 11
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.2e-28 Score=145.54 Aligned_cols=118 Identities=21% Similarity=0.172 Sum_probs=110.4
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.||||+|+.. +..+++++..|..|.||||+|+..++.+++++|++.++++. ..+..|.||||+|+..+
T Consensus 35 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 113 (167)
T 3v31_A 35 EGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVN-EYDWNGGTPLLYAVHGN 113 (167)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-cCCCCCCCHHHHHHHcC
Confidence 488999999988 56788999999999999999999999999999999999986 78899999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~ 119 (127)
+.+++++|++.|++++.++..|.||+++|+..|+.+++++|+++ ....
T Consensus 114 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 114 HVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988 4443
No 12
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=2e-29 Score=147.56 Aligned_cols=118 Identities=13% Similarity=0.062 Sum_probs=106.8
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCC-hhhhhhhc
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLY-PIHLACKN 70 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t-~l~~a~~~ 70 (127)
.|.||||+|+.. +..+.+++.+|..|.||||+|+ .++.+++++|++.|+++. ..+..|+| |||+|+..
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~-~~d~~g~ttpL~~A~~~ 88 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPN-CADPATLTRPVHDAARE 88 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCC-CCCTTTCCCHHHHHHHH
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHHC
Confidence 478999999998 5678899999999999999985 999999999999999986 78889999 99999999
Q ss_pred CchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 71 GHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 71 ~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++ .+++.
T Consensus 89 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 89 GFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG 139 (156)
T ss_dssp TCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999999999999999999999999988 44443
No 13
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=2.6e-28 Score=144.45 Aligned_cols=117 Identities=21% Similarity=0.224 Sum_probs=93.7
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
+.+||+.|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.+.++. ..+..|.||||+|+..|+
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~ 92 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN-AVDHAGMTPLRLAALFGH 92 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTC
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCC
Confidence 35678888877 55677788888888888888888888888888888887775 677778888888888888
Q ss_pred hHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccc
Q 044402 73 VKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~ 119 (127)
.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++ .+++
T Consensus 93 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 140 (169)
T 2y1l_E 93 LEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 8888888888888888888888888888888888888888877 4443
No 14
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=2.8e-28 Score=146.83 Aligned_cols=115 Identities=19% Similarity=0.240 Sum_probs=108.9
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.||||+|+.. +..+++++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..|
T Consensus 67 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 145 (192)
T 2rfm_A 67 EGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN-DRNLEGETPLIVASKYG 145 (192)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHT
T ss_pred cCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcC
Confidence 488999999987 56789999999999999999999999999999999999986 78899999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
+.+++++|++.|++++.++..|.||+++|+..|+.+++++|++.+
T Consensus 146 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 146 RSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999863
No 15
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=1.3e-28 Score=145.10 Aligned_cols=118 Identities=18% Similarity=0.268 Sum_probs=95.2
Q ss_pred CcchHHHHHHH--------hhh--cCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 2 GNTAFHESLFI--------INR--VTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 2 g~~~lh~a~~~--------l~~--~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
|.||||.|+.. +.+ +.+++..+..|.||||+|+..++.+++++|++.+.++. ..+..|+||||+|+..+
T Consensus 8 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 86 (165)
T 3twr_A 8 ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH-AKDKGGLVPLHNACSYG 86 (165)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred hhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC-ccCCCCCCHHHHHHHcC
Confidence 56788888887 332 34556677778888888888888888888888888875 67778888888888888
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++ .+++.
T Consensus 87 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 136 (165)
T 3twr_A 87 HYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK 136 (165)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 88888888888888888888888888888888888888888887 44433
No 16
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=3.2e-28 Score=142.91 Aligned_cols=111 Identities=16% Similarity=0.136 Sum_probs=78.1
Q ss_pred cchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCch
Q 044402 3 NTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHV 73 (127)
Q Consensus 3 ~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~ 73 (127)
.||||.|+.. +..+.+++.+|..|.||||+|+. ++.+++++|++.+.++. ..+..|+||||+|+..|+.
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~ 83 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPD-LKDRTGFAVIHDAARAGFL 83 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCH
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCH
Confidence 4677777766 44556666777777777777766 77777777777776664 5666677777777777777
Q ss_pred HHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 74 KVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 74 ~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+++++|++.|++++.++..|.||||+|+..|+.+++++|+++
T Consensus 84 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 125 (162)
T 1ihb_A 84 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH 125 (162)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 777777777777777777777777777777777777777766
No 17
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.5e-27 Score=141.17 Aligned_cols=114 Identities=20% Similarity=0.265 Sum_probs=107.9
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.||||.|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.++++. ..+..|.||||+|+..+
T Consensus 46 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 124 (169)
T 2y1l_E 46 SGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVN-ANDMEGHTPLHLAAMFG 124 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcC
Confidence 478999999987 56788999999999999999999999999999999999986 78889999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+.+++++|++.|++++.++..|.||+++|+..|+.+++++|++.
T Consensus 125 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 125 HLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999875
No 18
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=4.2e-28 Score=144.69 Aligned_cols=113 Identities=17% Similarity=0.142 Sum_probs=82.2
Q ss_pred CcchHHHHHHH---------hhh-cCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 2 GNTAFHESLFI---------INR-VTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~-~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+.++||.|+.. +.. +.+++..|..|.||||+|+..++.+++++|++.++++. ..+..|+||||+|+..|
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN-VMNRGDDTPLHLAASHG 83 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcC
Confidence 45677777776 222 34567777777777777777777777777777777765 56667777777777777
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++
T Consensus 84 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 127 (179)
T 3f6q_A 84 HRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN 127 (179)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 77777777777777777777777777777777777777777776
No 19
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=5.9e-28 Score=141.05 Aligned_cols=114 Identities=12% Similarity=0.101 Sum_probs=85.7
Q ss_pred CcchHHHHHHH--------hhhcC--CCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 2 GNTAFHESLFI--------INRVT--KWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 2 g~~~lh~a~~~--------l~~~~--~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
|.||||.|+.. +++.. +++..|..|.||||+ +..++.+++++|++.|.++. ..+..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPN-VQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcC
Confidence 56777877777 33223 677777778888888 77788888888888777775 56777778888888888
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhcc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKISE 117 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~ 117 (127)
+.+++++|++.|++++.++..|+||||+|+..|+.+++++|++..+
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 125 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESD 125 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTSC
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhccC
Confidence 8888888888877777777778888888888888888888776633
No 20
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=9.5e-29 Score=141.81 Aligned_cols=114 Identities=20% Similarity=0.184 Sum_probs=100.9
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.||||.|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.++++. ..+..|.||||+|+..+
T Consensus 9 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 87 (137)
T 3c5r_A 9 RGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN-TTGYQNDSPLHDAAKNG 87 (137)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCGGGCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc-CcCCCCCCHHHHHHHcC
Confidence 488999999988 55678899999999999999999999999999999999885 78888999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+.+++++|++.|++++.+|..|.||+++|+..+..+++++|.+.
T Consensus 88 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 88 HVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 99999999999999999999999999999998888888877765
No 21
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=1.6e-27 Score=141.22 Aligned_cols=118 Identities=19% Similarity=0.208 Sum_probs=106.5
Q ss_pred CcchHHHHHHH---------hhhcCC-CCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 2 GNTAFHESLFI---------INRVTK-WKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~-~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+.+|||.|+.. +..+.. ++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH-ILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCch-hhcccCCCHHHHHHHCC
Confidence 46899999988 444544 78899999999999999999999999999999986 78889999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++ .+++.
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 130 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT 130 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 99999999999999999999999999999999999999999998 55443
No 22
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=3.9e-28 Score=145.92 Aligned_cols=113 Identities=10% Similarity=-0.011 Sum_probs=103.4
Q ss_pred CcchHHHHHHH-------------hhhcCCCCccccCCchhHHHHHhcCC------HHHHHHHHHhcCCCcccccccCC-
Q 044402 2 GNTAFHESLFI-------------INRVTKWKTKDWNENIPLYFATSNTY------IRGVCFLLELNGHSAIEHNIKTL- 61 (127)
Q Consensus 2 g~~~lh~a~~~-------------l~~~~~~~~~d~~g~t~l~~a~~~~~------~~~~~~ll~~~~~~~~~~~~~~~- 61 (127)
|+||||+|+.. +..|++++.+|..|+||||+|+..++ .+++++|++.|+++. .++..|+
T Consensus 38 g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin-~~d~~g~t 116 (186)
T 3t8k_A 38 KSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT-ALYKPYKI 116 (186)
T ss_dssp TTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSS-SCBGGGTB
T ss_pred CCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCC-ccCCCcCc
Confidence 89999999752 66899999999999999999999987 678999999999996 7899999
Q ss_pred ChhhhhhhcC-----chHHHHHHHh-ccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 62 YPIHLACKNG-----HVKVMVEMLK-KQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 62 t~l~~a~~~~-----~~~~~~~l~~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
||||+|+..+ +.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|.+.
T Consensus 117 tpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 117 VVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp CTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred hHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 9999999954 4569999999 9999999999999999999999999999999977
No 23
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=4.7e-28 Score=149.78 Aligned_cols=119 Identities=9% Similarity=0.117 Sum_probs=109.6
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.||||.|+.. +..+++++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|+||||+|+..|+
T Consensus 21 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n-~~d~~g~tpLh~A~~~g~ 99 (229)
T 2vge_A 21 PLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVN-SPDSHGWTPLHCAASCND 99 (229)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTC
T ss_pred hhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCC
Confidence 56889999998 56788999999999999999999999999999999999986 788899999999999999
Q ss_pred hHHHHHHHhccCCCCccc-CCCCcHHHHH--HhcCcHHHHHHHHHh-cccccc
Q 044402 73 VKVMVEMLKKQHCPMFVT-NSGYNILHFV--VKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~-~~~~t~l~~a--~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
.+++++|++.|++++..+ ..|+||||+| +..|+.+++++|++. .+++..
T Consensus 100 ~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~ 152 (229)
T 2vge_A 100 TVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLM 152 (229)
T ss_dssp HHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccc
Confidence 999999999999999886 6999999999 999999999999998 555443
No 24
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=2.8e-27 Score=145.99 Aligned_cols=120 Identities=13% Similarity=0.108 Sum_probs=94.5
Q ss_pred CCcchHHHHHHH---------hhh-cCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCc----ccccccCCChhhh
Q 044402 1 MGNTAFHESLFI---------INR-VTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSA----IEHNIKTLYPIHL 66 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~-~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~----~~~~~~~~t~l~~ 66 (127)
.|.||||.|+.. +.. +.+++.+|..|.||||+|+..++.+++++|++.+++.. ...+..|+||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 378888888887 334 77888888888888888888888888888888877642 1345578888888
Q ss_pred hhhcCchHHHHHHHhccCCCCcccC-------------CCCcHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 67 ACKNGHVKVMVEMLKKQHCPMFVTN-------------SGYNILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 67 a~~~~~~~~~~~l~~~~~~~~~~~~-------------~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
|+..|+.+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++ .+++.
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 149 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA 149 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 8888888888888888888877654 688888888888888888888887 44443
No 25
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=6.9e-27 Score=139.42 Aligned_cols=119 Identities=18% Similarity=0.123 Sum_probs=111.2
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.||||+|+.. +..+++++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..+
T Consensus 38 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~ 116 (179)
T 3f6q_A 38 HGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADIN-AVNEHGNVPLHYACFWG 116 (179)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcC
Confidence 478999999988 56789999999999999999999999999999999999986 78899999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
+.+++++|++.|++++.++..|.||+++|+..++.+++++|++. .+++.
T Consensus 117 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 117 QDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp CHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSC
T ss_pred CHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 99999999999999999999999999999999999999999998 44443
No 26
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=1e-27 Score=149.97 Aligned_cols=114 Identities=15% Similarity=0.219 Sum_probs=106.8
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccC-------------CchhHHHHHhcCCHHHHHHHHH---hcCCCcccc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWN-------------ENIPLYFATSNTYIRGVCFLLE---LNGHSAIEH 56 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~-------------g~t~l~~a~~~~~~~~~~~ll~---~~~~~~~~~ 56 (127)
|.||||+|+.. +..|++++.+|.. |.||||+|+..++.+++++|++ .|+++. ..
T Consensus 90 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n-~~ 168 (256)
T 2etb_A 90 GHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLE-AT 168 (256)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-CC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcC-cc
Confidence 89999999988 5678899998876 9999999999999999999999 899986 78
Q ss_pred cccCCChhhhhhh--cCchH-------HHHHHHhccCCC-------CcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 57 NIKTLYPIHLACK--NGHVK-------VMVEMLKKQHCP-------MFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 57 ~~~~~t~l~~a~~--~~~~~-------~~~~l~~~~~~~-------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
+..|+||||+|+. .++.+ ++++|++.|+++ +.+|..|+||||+|+..|+.+++++|++++
T Consensus 169 d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 169 DSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp CTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 9999999999999 78888 999999999999 899999999999999999999999999984
No 27
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=7.9e-27 Score=143.81 Aligned_cols=113 Identities=18% Similarity=0.207 Sum_probs=73.6
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.||||.|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.+.++. ..+..|.||||+|+..|+
T Consensus 73 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~ 151 (231)
T 3aji_A 73 GWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD-AKDHYDATAMHRAAAKGN 151 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTC
T ss_pred CCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHcCC
Confidence 55666666555 34455666666666666666666666666666666666654 455666666666666666
Q ss_pred hHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 73 VKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
.+++++|++.|++++.++..|.||||+|+..++.+++++|+++
T Consensus 152 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 194 (231)
T 3aji_A 152 LKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQ 194 (231)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHC
Confidence 6666666666666666666667777777777777777777666
No 28
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=3.5e-27 Score=137.54 Aligned_cols=111 Identities=14% Similarity=0.199 Sum_probs=105.4
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.||||.|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..+
T Consensus 33 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 111 (153)
T 1awc_B 33 LGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVN-AKDMLKMTALHWATEHN 111 (153)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcC
Confidence 488999999998 56788999999999999999999999999999999999986 78899999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHH
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAI 112 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L 112 (127)
+.+++++|++.|++++.++..|.||+++|+..|+.+++++|
T Consensus 112 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 112 HQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999999999987
No 29
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=9.3e-28 Score=150.38 Aligned_cols=115 Identities=18% Similarity=0.241 Sum_probs=106.3
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccc--------------cCCchhHHHHHhcCCHHHHHHHHH---hcCCCcc
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKD--------------WNENIPLYFATSNTYIRGVCFLLE---LNGHSAI 54 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d--------------~~g~t~l~~a~~~~~~~~~~~ll~---~~~~~~~ 54 (127)
.|+||||+|+.. +..|++++.++ ..|.||||+|+..++.+++++|++ .|+++.
T Consensus 92 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~- 170 (260)
T 3jxi_A 92 RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLR- 170 (260)
T ss_dssp ESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCc-
Confidence 378999999988 56789999988 689999999999999999999999 889886
Q ss_pred cccccCCChhhhhhhcCc---------hHHHHHHHhccCCC-------CcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 55 EHNIKTLYPIHLACKNGH---------VKVMVEMLKKQHCP-------MFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 55 ~~~~~~~t~l~~a~~~~~---------~~~~~~l~~~~~~~-------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
..+..|+||||+|+..++ .+++++|++.|+++ +.++..|+||||+|+..|+.+++++|++++
T Consensus 171 ~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 171 RQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRRE 248 (260)
T ss_dssp CCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 789999999999998877 79999999999998 679999999999999999999999999983
No 30
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=8.7e-27 Score=143.29 Aligned_cols=118 Identities=18% Similarity=0.226 Sum_probs=101.5
Q ss_pred CCcchHHHHHHH---------hhhc--CCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhh
Q 044402 1 MGNTAFHESLFI---------INRV--TKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACK 69 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~--~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~ 69 (127)
.|.||||.|+.. +..+ .+++.+|..|.||||+|+..++.+++++|++.|.++. ..+..|+||||+|+.
T Consensus 71 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~ 149 (228)
T 2dzn_A 71 SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVR-IKDKFNQIPLHRAAS 149 (228)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc-ccCCCCCCHHHHHHH
Confidence 378899999887 4455 6788888899999999999999999999999988885 678889999999999
Q ss_pred cCchHHHHHHHhcc-CCCCcccCCCCcHHHHHHhcCcHHHHHHHH-Hh-cccc
Q 044402 70 NGHVKVMVEMLKKQ-HCPMFVTNSGYNILHFVVKNGHVNMVKAII-KI-SETN 119 (127)
Q Consensus 70 ~~~~~~~~~l~~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll-~~-~~~~ 119 (127)
.|+.+++++|++.| ++++.++..|+||||+|+..|+.+++++|+ +. .+++
T Consensus 150 ~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~ 202 (228)
T 2dzn_A 150 VGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD 202 (228)
T ss_dssp TTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSC
T ss_pred cCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCC
Confidence 99999999999998 888999999999999999999999999999 55 4443
No 31
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=4.1e-27 Score=147.20 Aligned_cols=99 Identities=13% Similarity=0.099 Sum_probs=48.9
Q ss_pred hcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCC
Q 044402 15 RVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGY 94 (127)
Q Consensus 15 ~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~ 94 (127)
.+++++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..|+.+++++|++.|++++.+|..|.
T Consensus 146 ~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~ 224 (253)
T 1yyh_A 146 SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-MQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDR 224 (253)
T ss_dssp TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCC
Confidence 344444444445555555555555555555555544443 3444445555555555555555555555555544455555
Q ss_pred cHHHHHHhcCcHHHHHHHHH
Q 044402 95 NILHFVVKNGHVNMVKAIIK 114 (127)
Q Consensus 95 t~l~~a~~~~~~~~~~~Ll~ 114 (127)
||+++|+..|+.+++++|..
T Consensus 225 tpl~~A~~~g~~~i~~~l~~ 244 (253)
T 1yyh_A 225 LPRDIAQERMHHDIVRLLDL 244 (253)
T ss_dssp CHHHHHHHTTCHHHHHHHHC
T ss_pred CHHHHHHHcCCHHHHHHHHH
Confidence 55555555555555554443
No 32
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=4.9e-27 Score=138.33 Aligned_cols=114 Identities=17% Similarity=0.158 Sum_probs=106.4
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.||||+|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.++++. ..+..|+||||+|+..|
T Consensus 41 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 119 (165)
T 3twr_A 41 RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVN-VADLWKFTPLHEAAAKG 119 (165)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHHcC
Confidence 378999999988 56788999999999999999999999999999999999986 78889999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
+.+++++|++.|++++.++..|.||+++|+. ++.+++++|++++
T Consensus 120 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~g 163 (165)
T 3twr_A 120 KYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA 163 (165)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred CHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence 9999999999999999999999999999877 8899999999775
No 33
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=8.5e-27 Score=143.00 Aligned_cols=113 Identities=15% Similarity=0.136 Sum_probs=61.9
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.||||.|+.. +..+++++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..++
T Consensus 92 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~ 170 (223)
T 2f8y_A 92 GTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-MQNNREETPLFLAAREGS 170 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHTC
T ss_pred CCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCcCHHHHHHHcCC
Confidence 44555555544 33445555555555555555555555555555555555553 445555555555555555
Q ss_pred hHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 73 VKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
.+++++|++.|++++.++..|.||+++|+..++.+++++|++.
T Consensus 171 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~ 213 (223)
T 2f8y_A 171 YETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEY 213 (223)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHc
Confidence 5555555555555555555555555555555555555555554
No 34
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2.8e-27 Score=138.85 Aligned_cols=115 Identities=19% Similarity=0.200 Sum_probs=107.2
Q ss_pred CCcchHHHHHHH--------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 1 MGNTAFHESLFI--------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 1 ~g~~~lh~a~~~--------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
.|.||||.|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.+.++. ..+..|+||||+|+..|+
T Consensus 37 ~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~ 115 (162)
T 1ihb_A 37 FGRTALQVMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVN-IEDNEGNLPLHLAAKEGH 115 (162)
T ss_dssp TSCCHHHHCCSSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTC
T ss_pred cCccHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCC
Confidence 478999998754 66788999999999999999999999999999999999986 788899999999999999
Q ss_pred hHHHHHHHhccCCC-CcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 73 VKVMVEMLKKQHCP-MFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 73 ~~~~~~l~~~~~~~-~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
.+++++|++.|++. +.++..|.|||++|+..|+.+++++|++++
T Consensus 116 ~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 116 LRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 99999999999984 999999999999999999999999999874
No 35
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=4e-27 Score=145.72 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=77.2
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCC-----cccccccCCChhhhh
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHS-----AIEHNIKTLYPIHLA 67 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~-----~~~~~~~~~t~l~~a 67 (127)
|.||||+|+.. +..|++++.+|..|.||||+|+..++.+++++|++.+..+ ....+..|.||||+|
T Consensus 45 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A 124 (236)
T 1ikn_D 45 QQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHH
Confidence 56777777665 4455667777777777777777777777777777766532 123455567777777
Q ss_pred hhcCchHHHHHHHhccCCCCcccC-CCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 68 CKNGHVKVMVEMLKKQHCPMFVTN-SGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+..|+.+++++|++.|++++.++. .|.||||+|+..|+.+++++|+++
T Consensus 125 ~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 173 (236)
T 1ikn_D 125 SIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC 173 (236)
T ss_dssp HHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 777777777777777777766665 677777777777777777777766
No 36
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=3.6e-27 Score=137.70 Aligned_cols=112 Identities=18% Similarity=0.251 Sum_probs=104.7
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.||||. +.. +..|++++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|+||||+|+..|
T Consensus 35 ~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 112 (156)
T 1bd8_A 35 FGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVN-VPDGTGALPIHLAVQEG 112 (156)
T ss_dssp TSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHHT
T ss_pred CCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHhC
Confidence 48899999 544 66789999999999999999999999999999999999986 78889999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+.+++++|++. ++++.++..|.|||++|+..|+.+++++|+++
T Consensus 113 ~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 113 HTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred hHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999 99999999999999999999999999999874
No 37
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=3.3e-27 Score=149.46 Aligned_cols=101 Identities=14% Similarity=0.118 Sum_probs=71.6
Q ss_pred hcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHh-ccCCCCcccCCC
Q 044402 15 RVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLK-KQHCPMFVTNSG 93 (127)
Q Consensus 15 ~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~ 93 (127)
.+.+++..|..|.||||+|+..|+.+++++|++.|+++. ..+..|+||||+|+..|+.+++++|++ .|++++.+|..|
T Consensus 172 ~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n-~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g 250 (276)
T 4hbd_A 172 LGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVN-VQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDG 250 (276)
T ss_dssp HSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTS
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCC
Confidence 344455555667777777777777777777777777764 566677777777777777777777777 677777777777
Q ss_pred CcHHHHHHhcCcHHHHHHHHHhc
Q 044402 94 YNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 94 ~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
.|||++|+..|+.+++++|+++.
T Consensus 251 ~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 251 STALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCHHHHHHHcCCHHHHHHHHhcc
Confidence 77777777777777777777664
No 38
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=4.8e-27 Score=146.87 Aligned_cols=97 Identities=14% Similarity=0.125 Sum_probs=51.5
Q ss_pred CCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHH
Q 044402 18 KWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNIL 97 (127)
Q Consensus 18 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l 97 (127)
+++.++..|.||||+|+..++.+++++|++.|.++. ..+..|+||||+|+..|+.+++++|++.|++++.++..|.|||
T Consensus 116 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL 194 (253)
T 1yyh_A 116 DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN-AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPL 194 (253)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTT-CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 344444444444444444444444444444444443 3444555555555555555555555555555555555555555
Q ss_pred HHHHhcCcHHHHHHHHHh
Q 044402 98 HFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 98 ~~a~~~~~~~~~~~Ll~~ 115 (127)
|+|+..|+.+++++|+++
T Consensus 195 ~~A~~~~~~~~v~~Ll~~ 212 (253)
T 1yyh_A 195 FLAAREGSYETAKVLLDH 212 (253)
T ss_dssp HHHHHHTCHHHHHHHHHT
T ss_pred HHHHHCCCHHHHHHHHHc
Confidence 555555555555555555
No 39
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.95 E-value=8e-28 Score=135.68 Aligned_cols=107 Identities=16% Similarity=0.131 Sum_probs=91.2
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.||||.|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.++++. ..+..|+||||+|+..+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN-APDKHHITPLLSAVYEG 84 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHcC
Confidence 367899999887 55678888899999999999999999999999999998885 67888999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHH
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNM 108 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 108 (127)
+.+++++|++.|++++.++..|.||+++|...+..++
T Consensus 85 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 85 HVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence 9999999999999999999999999999855444333
No 40
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=4.7e-27 Score=148.28 Aligned_cols=103 Identities=15% Similarity=0.135 Sum_probs=94.3
Q ss_pred CCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCccccc-ccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcH
Q 044402 18 KWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHN-IKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNI 96 (127)
Q Consensus 18 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~ 96 (127)
+++.+|..|.||||+|+..++.+++++|++.|+++. ..+ ..|+||||+|+..|+.+++++|++.|++++.++..|.||
T Consensus 150 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tp 228 (282)
T 1oy3_D 150 QLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN-KPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTP 228 (282)
T ss_dssp GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred cCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCH
Confidence 367788999999999999999999999999999986 455 459999999999999999999999999999999999999
Q ss_pred HHHHHhcCcHHHHHHHHHh-cccccc
Q 044402 97 LHFVVKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 97 l~~a~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
||+|+..|+.+++++|+++ .+++..
T Consensus 229 L~~A~~~~~~~~v~~Ll~~ga~~~~~ 254 (282)
T 1oy3_D 229 LGSALLRPNPILARLLRAHGAPEPED 254 (282)
T ss_dssp HHHHHTSSCHHHHHHHHHTTCCCCCC
T ss_pred HHHHHHcCCcHHHHHHHHcCCCcCcC
Confidence 9999999999999999999 555443
No 41
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=9.8e-27 Score=146.08 Aligned_cols=99 Identities=17% Similarity=0.132 Sum_probs=52.6
Q ss_pred hcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCC
Q 044402 15 RVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGY 94 (127)
Q Consensus 15 ~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~ 94 (127)
.+++++.+|..|.||||+|+..++.+++++|++.++++. .+..|.||||+|+..|+.+++++|++.|++++.++..|.
T Consensus 58 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 135 (261)
T 2xai_A 58 HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLG 135 (261)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTB
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCC
Confidence 344444444445555555555555555555555444442 233355555555555555555555555555555555555
Q ss_pred cHHHHHHhcCcHHHHHHHHHh
Q 044402 95 NILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 95 t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
||||+|+..|+.+++++|+++
T Consensus 136 t~L~~A~~~~~~~~v~~Ll~~ 156 (261)
T 2xai_A 136 TPLYLACENQQRACVKKLLES 156 (261)
T ss_dssp CHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHhCCHHHHHHHHHc
Confidence 666666666666666666555
No 42
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.95 E-value=6.4e-28 Score=148.23 Aligned_cols=114 Identities=14% Similarity=0.069 Sum_probs=102.9
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHh-cCCCcccccccCCChhhhhhhcC
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLEL-NGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
|.||||.|+.. +..+.+++.+|..|.||||+|+..++.+++++|++. ++++. ..+..|+||||+|+..|
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~-~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELN-QQNKLGDTALHAAAWKG 151 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCC-CCCTTSCCHHHHHHHHT
T ss_pred cccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcc-ccCCCCCCHHHHHHHcC
Confidence 68999999988 557889999999999999999999999999999998 88885 78999999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
+.+++++|++.|++++.++..|.|||++|+..+..++++.|++.+
T Consensus 152 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~ 196 (222)
T 3ehr_A 152 YADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTD 196 (222)
T ss_dssp CHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC------
T ss_pred CHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999873
No 43
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=2.1e-26 Score=139.31 Aligned_cols=118 Identities=18% Similarity=0.229 Sum_probs=82.8
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.||||+|+.. +..|++++.+|..|.||||+|+..++.+++++|++.+.......+..|.||||+|+..++
T Consensus 39 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~ 118 (201)
T 3hra_A 39 GNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGH 118 (201)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCC
Confidence 66777777776 455677777777777777777777777777777744432223566667777777777777
Q ss_pred hHHHHHHHhcc-CCCCcccCCCCcHHHHHHhcCc-----HHHHHHHHHh-cccc
Q 044402 73 VKVMVEMLKKQ-HCPMFVTNSGYNILHFVVKNGH-----VNMVKAIIKI-SETN 119 (127)
Q Consensus 73 ~~~~~~l~~~~-~~~~~~~~~~~t~l~~a~~~~~-----~~~~~~Ll~~-~~~~ 119 (127)
.+++++|++.| ++++.++..|.||||+|+..+. .+++++|+++ .+++
T Consensus 119 ~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~ 172 (201)
T 3hra_A 119 IDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS 172 (201)
T ss_dssp HHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC
Confidence 77777777777 6777777777777777777666 7777777776 4443
No 44
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=1.5e-26 Score=142.57 Aligned_cols=119 Identities=23% Similarity=0.189 Sum_probs=103.1
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.||||+|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.+.++. ..+..|.||||+|+..+
T Consensus 39 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 117 (231)
T 3aji_A 39 DSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVN-AVNQNGCTPLHYAASKN 117 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcC
Confidence 478899999887 55678888889999999999999999999999999988885 67888899999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++. .+++.
T Consensus 118 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 167 (231)
T 3aji_A 118 RHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI 167 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc
Confidence 99999999999999988899999999999999999999999988 44443
No 45
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=1.4e-26 Score=141.98 Aligned_cols=114 Identities=17% Similarity=0.149 Sum_probs=56.6
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.||||+|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.+.......+..+.||||+|+..++
T Consensus 25 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~ 104 (223)
T 2f8y_A 25 GETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAV 104 (223)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCc
Confidence 45555555554 334445555555555555555555555555555555442212334444455555555455
Q ss_pred hHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 73 VKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++
T Consensus 105 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 147 (223)
T 2f8y_A 105 EGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN 147 (223)
T ss_dssp HHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 5555555444444444444444444444444444444444444
No 46
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.95 E-value=2.8e-27 Score=141.70 Aligned_cols=101 Identities=14% Similarity=0.069 Sum_probs=93.9
Q ss_pred CcchHHHHHHH--------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCccccc-ccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI--------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHN-IKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~--------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~l~~a~~~~~ 72 (127)
|.||||.|+.. ++++.+++.+|..|.||||+|+..++.+++++|++.|+++. ..+ ..|+||||+|+..|+
T Consensus 44 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~g~tpL~~A~~~~~ 122 (183)
T 3deo_A 44 YETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD-HRDMRGGLTALHMAAGYVR 122 (183)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTTTSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCSSSSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCCHHHHHHhcCc
Confidence 67999999987 55588999999999999999999999999999999999986 455 889999999999999
Q ss_pred hHHHHHHHhccCCCCcccCCCCcHHHHHHhc
Q 044402 73 VKVMVEMLKKQHCPMFVTNSGYNILHFVVKN 103 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 103 (127)
.+++++|++.|++++.+|..|.||||+|+..
T Consensus 123 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 123 PEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 9999999999999999999999999998876
No 47
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=9e-27 Score=152.08 Aligned_cols=115 Identities=16% Similarity=0.089 Sum_probs=108.1
Q ss_pred CCcchHHHHHHH-----------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCC-----CcccccccCCChh
Q 044402 1 MGNTAFHESLFI-----------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGH-----SAIEHNIKTLYPI 64 (127)
Q Consensus 1 ~g~~~lh~a~~~-----------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~-----~~~~~~~~~~t~l 64 (127)
.|.||||+|+.. +..+++++.+|..|.||||+|+..++.+++++|++.+++ +. ..+..|+|||
T Consensus 137 ~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~~~~g~t~L 215 (364)
T 3ljn_A 137 KGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLD-YANKQGNSHL 215 (364)
T ss_dssp SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTT-CCCTTCCCTT
T ss_pred CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccc-ccCCCCCcHH
Confidence 378999999874 567899999999999999999999999999999999988 64 7888999999
Q ss_pred hhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 65 HLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 65 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
|+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++++
T Consensus 216 ~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~ 267 (364)
T 3ljn_A 216 HWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKT 267 (364)
T ss_dssp HHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHS
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999984
No 48
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=2.1e-27 Score=147.51 Aligned_cols=100 Identities=14% Similarity=0.093 Sum_probs=52.0
Q ss_pred hcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCC
Q 044402 15 RVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGY 94 (127)
Q Consensus 15 ~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~ 94 (127)
.+++++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|+||||+|+..|+.+++++|++.|++++.++..+.
T Consensus 59 ~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~ 137 (239)
T 1ycs_B 59 EVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN-AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDM 137 (239)
T ss_dssp TTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSC
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCC
Confidence 344555555555555555555555555555555555543 4444555555555555555555555555555555544443
Q ss_pred -cHHHHH--HhcCcHHHHHHHHHh
Q 044402 95 -NILHFV--VKNGHVNMVKAIIKI 115 (127)
Q Consensus 95 -t~l~~a--~~~~~~~~~~~Ll~~ 115 (127)
||+|+| +..|+.+++++|+++
T Consensus 138 ~t~l~~a~~~~~g~~~~~~~Ll~~ 161 (239)
T 1ycs_B 138 QTAADKCEEMEEGYTQCSQFLYGV 161 (239)
T ss_dssp CCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred cchHHHHHHhhhccHHHHHHHHHh
Confidence 555555 444555555555544
No 49
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=2.3e-27 Score=147.41 Aligned_cols=120 Identities=13% Similarity=0.048 Sum_probs=90.1
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
.|.||||.|++. +.+|++++. +..|.||||+|+..|+.+++++|++.++++. ..+..|.||||+|+..|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPS-LPNDEGITALHNAVCAG 81 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCC-CCCTTSCCHHHHHHHHT
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcC
Confidence 489999999998 667788876 4788999999999999999999999999886 78899999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNISM 122 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~ 122 (127)
+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++ .+++...
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~ 133 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceec
Confidence 99999999999999999999999999999999999999999998 5555443
No 50
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=2e-26 Score=144.67 Aligned_cols=118 Identities=17% Similarity=0.143 Sum_probs=97.8
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+|+||||.|+.. +..+.+++.+|..|.||||+|+..|+.+++++|++.|+++. ..+..|+||||+|+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN-GVTADWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcC
Confidence 488999999887 55678888888889999999999999999999999888875 67888889999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
+.+++++|++.|++++. +..|.||||+|+..|+.+++++|++. .+++.
T Consensus 81 ~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 129 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDH 129 (261)
T ss_dssp CHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 99999999998888875 34588999999999999999999888 44443
No 51
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=1.3e-26 Score=143.01 Aligned_cols=113 Identities=14% Similarity=0.192 Sum_probs=70.6
Q ss_pred CcchHHHHHHH---------hhhcCCC-----CccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccc---------
Q 044402 2 GNTAFHESLFI---------INRVTKW-----KTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNI--------- 58 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~-----~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~--------- 58 (127)
|.||||+|+.. +..+.++ +.+|..|.||||+|+..++.+++++|++.|+++. ..+.
T Consensus 37 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~~~~~~~~ 115 (232)
T 2rfa_A 37 GETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVS-ARATGSVFHYRPH 115 (232)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCSGGGSCCTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCC-cccCCcceeeccc
Confidence 56666666665 3344443 4556666666666666666666666666666554 2222
Q ss_pred ----cCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHH----HHHHHh
Q 044402 59 ----KTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMV----KAIIKI 115 (127)
Q Consensus 59 ----~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~----~~Ll~~ 115 (127)
.|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++ ++|++.
T Consensus 116 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~ 180 (232)
T 2rfa_A 116 NLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSY 180 (232)
T ss_dssp CSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHT
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhc
Confidence 466666666666666666666666666666666666666666666666655 666655
No 52
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=4.1e-27 Score=148.51 Aligned_cols=116 Identities=16% Similarity=0.175 Sum_probs=106.5
Q ss_pred CCcchHHHHHHH---------hhhcCCCCcccc--------------CCchhHHHHHhcCCHHHHHHHHH---hcCCCcc
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDW--------------NENIPLYFATSNTYIRGVCFLLE---LNGHSAI 54 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~--------------~g~t~l~~a~~~~~~~~~~~ll~---~~~~~~~ 54 (127)
.|.||||+|+.. +..|++++.++. .|.||||+|+..++.+++++|++ .|+++.
T Consensus 100 ~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~- 178 (273)
T 2pnn_A 100 KGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADIS- 178 (273)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCce-
Confidence 388999999987 567889999887 79999999999999999999999 899886
Q ss_pred cccccCCChhhhhhhcCc---------hHHHHHHHhccCCCC-------cccCCCCcHHHHHHhcCcHHHHHHHHHhcc
Q 044402 55 EHNIKTLYPIHLACKNGH---------VKVMVEMLKKQHCPM-------FVTNSGYNILHFVVKNGHVNMVKAIIKISE 117 (127)
Q Consensus 55 ~~~~~~~t~l~~a~~~~~---------~~~~~~l~~~~~~~~-------~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~ 117 (127)
..+..|+||||+|+..++ .+++++|++.|++++ .+|..|+||||+|+..|+.+++++|++++.
T Consensus 179 ~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 179 ARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREI 257 (273)
T ss_dssp CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred eeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCC
Confidence 788999999999999888 799999999999986 589999999999999999999999999843
No 53
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=9.4e-27 Score=146.91 Aligned_cols=60 Identities=15% Similarity=0.184 Sum_probs=37.2
Q ss_pred ccccCCChhhhhhhcCchHHHHHHHhccCCCCcccC-CCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 56 HNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTN-SGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 56 ~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
.+..|.||||+|+..|+.+++++|++.|++++..+. .|+||||+|+..|+.+++++|+++
T Consensus 154 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 214 (282)
T 1oy3_D 154 ENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA 214 (282)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc
Confidence 344556666666666666666666666666665553 366666666666666666666665
No 54
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.95 E-value=3.8e-27 Score=146.90 Aligned_cols=113 Identities=13% Similarity=0.085 Sum_probs=104.5
Q ss_pred CcchHHHHHHH--------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCccccc-ccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI--------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHN-IKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~--------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~l~~a~~~~~ 72 (127)
|.||||.|+.. ++.+.+++.+|..|.||||+|+..|+.+++++|++.|+++. ..+ ..|+||||+|+..|+
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~g~t~L~~A~~~g~ 123 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD-HRDMRGGLTALHMAAGYVR 123 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT-CCCSSSCCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-cCCCCCCCCHHHHHHHcCC
Confidence 67999999987 55588999999999999999999999999999999999996 455 789999999999999
Q ss_pred hHHHHHHHhccCCCCcccCCCCcHHHHHH----------------hcCcHHHHHHHHHh
Q 044402 73 VKVMVEMLKKQHCPMFVTNSGYNILHFVV----------------KNGHVNMVKAIIKI 115 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~~~~~t~l~~a~----------------~~~~~~~~~~Ll~~ 115 (127)
.+++++|++.|++++.++..|.||||+|+ ..|+.+++++|+++
T Consensus 124 ~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 124 PEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 99999999999999999999999999887 66889999999986
No 55
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=1.9e-26 Score=139.50 Aligned_cols=115 Identities=12% Similarity=0.094 Sum_probs=105.2
Q ss_pred CCcchHHHHHHH---------h-hhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhc-CCCcccccccCCChhhhhhh
Q 044402 1 MGNTAFHESLFI---------I-NRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELN-GHSAIEHNIKTLYPIHLACK 69 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l-~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~t~l~~a~~ 69 (127)
.|.||||+|+.. + ..+.+++.+|..|.||||+|+..++.+++++|++.+ .++. ..+..|+||||+|+.
T Consensus 71 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~ 149 (201)
T 3hra_A 71 ISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDID-FQNDFGYTALIEAVG 149 (201)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT-CCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC-CCCCCCCCHHHHHHH
Confidence 478999999988 3 344589999999999999999999999999999999 6664 788899999999999
Q ss_pred cCc-----hHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 70 NGH-----VKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 70 ~~~-----~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
.+. .+++++|++.|++++.++..|.|||++|+..|+.+++++|+++|
T Consensus 150 ~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 150 LREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp SSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred hccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 987 99999999999999999999999999999999999999999753
No 56
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=4e-27 Score=148.70 Aligned_cols=119 Identities=20% Similarity=0.246 Sum_probs=100.1
Q ss_pred CcchHHHHHHH----------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 2 GNTAFHESLFI----------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 2 g~~~lh~a~~~----------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
|.||||.|+.. +..|+++|.+|..|.||||+|+..|+.+++++|++.++++. ..+..|.||+++|+..+
T Consensus 52 ~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~-~~~~~g~t~l~~a~~~~ 130 (269)
T 4b93_B 52 FCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAG-ARNADQAVPLHLACQQG 130 (269)
T ss_dssp -----------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHT
T ss_pred CCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcC-ccCCCCCCccccccccC
Confidence 67899998865 56789999999999999999999999999999999999986 78889999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++ .+++..
T Consensus 131 ~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~ 181 (269)
T 4b93_B 131 HFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINAS 181 (269)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCB
T ss_pred hHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCcc
Confidence 99999999999999999999999999999999999999999998 555543
No 57
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=2.8e-26 Score=146.04 Aligned_cols=120 Identities=18% Similarity=0.233 Sum_probs=101.3
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCccc----------------
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIE---------------- 55 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~---------------- 55 (127)
.|.||||+|+.. +..|++++.+|..|.||||+|+..|+.+++++|++.|+++...
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 151 (299)
T 1s70_B 72 DGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAM 151 (299)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcch
Confidence 478999999887 5677889999999999999999999999999999988765310
Q ss_pred -------------------------------------------ccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCC
Q 044402 56 -------------------------------------------HNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNS 92 (127)
Q Consensus 56 -------------------------------------------~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~ 92 (127)
.+..|.||||+|+..|+.+++++|++.|++++.+|..
T Consensus 152 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~ 231 (299)
T 1s70_B 152 EELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYD 231 (299)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT
T ss_pred HHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCC
Confidence 1235778899999999999999999999999999999
Q ss_pred CCcHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 93 GYNILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 93 ~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
|.||||+|+..|+.+++++|+++ .+++.
T Consensus 232 g~tpL~~A~~~~~~~~v~~Ll~~gad~~~ 260 (299)
T 1s70_B 232 GWTPLHAAAHWGKEEACRILVENLCDMEA 260 (299)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999999988 44443
No 58
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.94 E-value=1.7e-26 Score=124.42 Aligned_cols=91 Identities=29% Similarity=0.437 Sum_probs=86.0
Q ss_pred CCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcC
Q 044402 25 NENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNG 104 (127)
Q Consensus 25 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 104 (127)
.|+||||+|+..++.+++++|++.++++. .++..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 47899999999999999999999999986 78899999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhc
Q 044402 105 HVNMVKAIIKIS 116 (127)
Q Consensus 105 ~~~~~~~Ll~~~ 116 (127)
+.+++++|++++
T Consensus 80 ~~~~~~~Ll~~g 91 (93)
T 1n0q_A 80 HLEVVKLLLEAG 91 (93)
T ss_dssp CHHHHHHHHHTT
T ss_pred CHHHHHHHHHcC
Confidence 999999999874
No 59
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=8.6e-27 Score=145.77 Aligned_cols=120 Identities=9% Similarity=0.025 Sum_probs=105.7
Q ss_pred CCcchHHHHHHH-------------hhhcCCCCc----cccCCchhHHHHHhc---CCHHHHHHHHHhcCCCccc-----
Q 044402 1 MGNTAFHESLFI-------------INRVTKWKT----KDWNENIPLYFATSN---TYIRGVCFLLELNGHSAIE----- 55 (127)
Q Consensus 1 ~g~~~lh~a~~~-------------l~~~~~~~~----~d~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~----- 55 (127)
+|+||||.|+.. +..+.+++. +|..|.||||+|+.. ++.+++++|++.++++...
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 589999999998 235788998 899999999999999 9999999999998766311
Q ss_pred -----ccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCC-------------CCcHHHHHHhcCcHHHHHHHHH---
Q 044402 56 -----HNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNS-------------GYNILHFVVKNGHVNMVKAIIK--- 114 (127)
Q Consensus 56 -----~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-------------~~t~l~~a~~~~~~~~~~~Ll~--- 114 (127)
.+..|.||||+|+..|+.+++++|++.|++++.++.. |.||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 2367999999999999999999999999999988876 9999999999999999999999
Q ss_pred h-ccccc
Q 044402 115 I-SETNI 120 (127)
Q Consensus 115 ~-~~~~~ 120 (127)
. .+++.
T Consensus 161 ~ga~~n~ 167 (256)
T 2etb_A 161 QPASLEA 167 (256)
T ss_dssp CCCCTTC
T ss_pred cCCCcCc
Confidence 6 44443
No 60
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=1.2e-26 Score=146.92 Aligned_cols=119 Identities=19% Similarity=0.259 Sum_probs=107.3
Q ss_pred CCcchHHHHHHH---------hhhcC-CCCccccCCchhHHHHH-----hcCCHHHHHHHHHhcCCCcccccccCCChhh
Q 044402 1 MGNTAFHESLFI---------INRVT-KWKTKDWNENIPLYFAT-----SNTYIRGVCFLLELNGHSAIEHNIKTLYPIH 65 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~-~~~~~d~~g~t~l~~a~-----~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~ 65 (127)
.|.||||+|+.. +..+. +++..|..|.||||+|+ ..++.+++++|++.|.... ..+..|+||||
T Consensus 110 ~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpLh 188 (276)
T 4hbd_A 110 NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINA-KASQAGQTALM 188 (276)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTC-CCTTTCCCHHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCcc-ccCCCCCCHHH
Confidence 489999999988 55666 89999999999999999 6688999999999998775 67888999999
Q ss_pred hhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHH-h-ccccc
Q 044402 66 LACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIK-I-SETNI 120 (127)
Q Consensus 66 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~-~-~~~~~ 120 (127)
+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++ . .+++.
T Consensus 189 ~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~ 245 (276)
T 4hbd_A 189 LAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL 245 (276)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC
T ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC
Confidence 9999999999999999999999999999999999999999999999998 4 44443
No 61
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=1.7e-26 Score=142.92 Aligned_cols=116 Identities=19% Similarity=0.196 Sum_probs=105.2
Q ss_pred CCcchHHHHHHH---------hhhcCC------CCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccc-cCCChh
Q 044402 1 MGNTAFHESLFI---------INRVTK------WKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNI-KTLYPI 64 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~------~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~~t~l 64 (127)
.|.||||+|+.. +..+.+ ++..+..|.||||+|+..++.+++++|++.|+++. ..+. .|+|||
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~g~tpL 155 (236)
T 1ikn_D 77 RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN-AQEPCNGRTAL 155 (236)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTTCCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCCHH
Confidence 488999999988 333433 46688899999999999999999999999999986 5665 899999
Q ss_pred hhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhcc
Q 044402 65 HLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKISE 117 (127)
Q Consensus 65 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~ 117 (127)
|+|+..|+.+++++|++.|++++.++..|.|||++|+..++.+++++|++++.
T Consensus 156 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 156 HLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 208 (236)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcch
Confidence 99999999999999999999999999999999999999999999999999844
No 62
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=6.5e-26 Score=140.34 Aligned_cols=117 Identities=17% Similarity=0.226 Sum_probs=81.3
Q ss_pred CcchHHHHHHH---------hhhcC----CCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCccccc-ccCCChhhhh
Q 044402 2 GNTAFHESLFI---------INRVT----KWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHN-IKTLYPIHLA 67 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~----~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~l~~a 67 (127)
|.||||.|+.. +..+. +++..|..|.||||+|+..++.+++++|++.+.++. ..+ ..|.||||+|
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~g~t~L~~A 157 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADID-AVDIKSGRSPLIHA 157 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTTCCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc-cccccCCCcHHHHH
Confidence 55666666655 22333 556666677777777777777777777777776664 344 5677777777
Q ss_pred hhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccc
Q 044402 68 CKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~ 119 (127)
+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++ .+++
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 210 (241)
T 1k1a_A 158 VENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS 210 (241)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence 777777777777777777777777777777777777777777777777 4433
No 63
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=4.9e-26 Score=144.60 Aligned_cols=99 Identities=17% Similarity=0.132 Sum_probs=55.8
Q ss_pred hcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCC
Q 044402 15 RVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGY 94 (127)
Q Consensus 15 ~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~ 94 (127)
.+++++.+|..|.||||+|+..++.+++++|++.+.++. .+..|.||||+|+..|+.+++++|++.|++++.++..|.
T Consensus 114 ~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~ 191 (285)
T 3d9h_A 114 HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLG 191 (285)
T ss_dssp TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTB
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 344555555555555555555555555555555554442 223355555555555566666666666666666666666
Q ss_pred cHHHHHHhcCcHHHHHHHHHh
Q 044402 95 NILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 95 t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
||||+|+..|+.+++++|++.
T Consensus 192 t~L~~A~~~~~~~~v~~Ll~~ 212 (285)
T 3d9h_A 192 TPLYLACENQQRACVKKLLES 212 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT
T ss_pred CHHHHHHHcCcHHHHHHHHHC
Confidence 666666666666666666655
No 64
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=4.4e-26 Score=151.81 Aligned_cols=114 Identities=23% Similarity=0.357 Sum_probs=100.2
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+|.||||.|+.. +.++++++..+..|.||||+|+..|+.+++++|++.++++. ..+..|+||||+|+..|
T Consensus 13 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g 91 (437)
T 1n11_A 13 SGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN-AKAKDDQTPLHCAARIG 91 (437)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSS-CCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CCCCCCCCHHHHHHHCC
Confidence 478999999988 55678888899999999999999999999999999998885 67888999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.
T Consensus 92 ~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 135 (437)
T 1n11_A 92 HTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 135 (437)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Confidence 99999999999999988888899999999999999999998887
No 65
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=7.2e-26 Score=139.98 Aligned_cols=113 Identities=18% Similarity=0.153 Sum_probs=75.0
Q ss_pred CcchHHHHHHH---------hhhc-CCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 2 GNTAFHESLFI---------INRV-TKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~-~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
|.||||.|+.. +..+ .+++..+..|.||||+|+..++.+++++|++.|.++. ..+..|.||||+|+..|
T Consensus 77 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 77 GSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN-IRDNEENICLHWAAFSG 155 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHC
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-ccCCCCCCHHHHHHHCC
Confidence 55666666655 2233 4566666666666666666666666666666666664 55666667777777777
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+.+++++|++.|++++.++..|.||||+|+..++.+++++|+++
T Consensus 156 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 199 (237)
T 3b7b_A 156 CVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSR 199 (237)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHc
Confidence 77777777777777766676777777777777777777777766
No 66
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=1.2e-26 Score=147.43 Aligned_cols=111 Identities=18% Similarity=0.139 Sum_probs=72.6
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.||||+|+.. +..+++++.+| |.||||+|+..++.+++++|++.|+++. ..+..|+||||+|+..|+
T Consensus 31 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~t~L~~A~~~g~ 107 (285)
T 3kea_A 31 GHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDS-QFDDKGNTALYYAVDSGN 107 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCcHHHHHHHcCC
Confidence 66777777665 34455555553 6666666666666666666666666664 456666666666666666
Q ss_pred hHHHHHHHhccCCCCcccCCC-CcHHHHHHhcCcHHHHHHHHHh
Q 044402 73 VKVMVEMLKKQHCPMFVTNSG-YNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~~~~-~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
.+++++|++.|++++.++..| .||||+|+..|+.+++++|+++
T Consensus 108 ~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~ 151 (285)
T 3kea_A 108 MQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE 151 (285)
T ss_dssp HHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 666666666666666666666 5666666666666666666665
No 67
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=1.6e-25 Score=138.45 Aligned_cols=113 Identities=19% Similarity=0.272 Sum_probs=66.8
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.||||.|+.. +..+.+++..+..|.||||+|+..++.+++++|++.|.++. ..+..|.||||+|+..|+
T Consensus 11 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~ 89 (237)
T 3b7b_A 11 KRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVD-PKDAEGSTCLHLAAKKGH 89 (237)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCC-CCCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC-CCCCCCCcHHHHHHHcCC
Confidence 56666666665 34455666666666666666666666666666666665553 445555566666666666
Q ss_pred hHHHHHHHhcc-CCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 73 VKVMVEMLKKQ-HCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 73 ~~~~~~l~~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
.+++++|++.| .+++..+..|.||||+|+..++.+++++|++.
T Consensus 90 ~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 133 (237)
T 3b7b_A 90 YEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK 133 (237)
T ss_dssp HHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 66666555555 45555555555555555555555555555555
No 68
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=8.3e-26 Score=143.57 Aligned_cols=117 Identities=17% Similarity=0.147 Sum_probs=88.3
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+|+||||+|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.++++. ..+..|+||||+|+..|
T Consensus 58 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~t~L~~A~~~~ 136 (285)
T 3d9h_A 58 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN-GVTADWHTPLFNACVSG 136 (285)
T ss_dssp CSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHT
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcC
Confidence 467888888776 45567777778888888888888888888888888877775 66777788888888888
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~ 119 (127)
+.+++++|++.|++++..+ .|.||||+|+..|+.+++++|++. .+++
T Consensus 137 ~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 184 (285)
T 3d9h_A 137 SWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNID 184 (285)
T ss_dssp CHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 8888888888777776543 377888888888888888888877 4433
No 69
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=8e-26 Score=150.56 Aligned_cols=113 Identities=19% Similarity=0.248 Sum_probs=80.8
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.||||.|+.. +..+++++..+..|.||||+|+..++.+++++|++.+.++. ..+..|+||||+|+..|+
T Consensus 245 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~ 323 (437)
T 1n11_A 245 GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD-ATTRMGYTPLHVASHYGN 323 (437)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCSSCCCHHHHHHHSSC
T ss_pred CCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCC-CCCCCCCCHHHHHHHcCc
Confidence 56667766665 34556666677777777777777777777777777776664 566667777777777777
Q ss_pred hHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 73 VKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++
T Consensus 324 ~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ 366 (437)
T 1n11_A 324 IKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN 366 (437)
T ss_dssp SHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHC
Confidence 7777777777777777777777777777777777777777776
No 70
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=9.7e-26 Score=138.62 Aligned_cols=94 Identities=14% Similarity=0.079 Sum_probs=57.6
Q ss_pred cccCCchhHHHHHhcCCHHHHHHHHHhc--CCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHH
Q 044402 22 KDWNENIPLYFATSNTYIRGVCFLLELN--GHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHF 99 (127)
Q Consensus 22 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~ 99 (127)
.+..|.||||+|+..++.+++++|++.+ .++. ..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~ 146 (228)
T 2dzn_A 68 PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLN-KITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHR 146 (228)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccc-cCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHH
Confidence 4555666666666666666666666655 4443 445556666666666666666666666666666666666666666
Q ss_pred HHhcCcHHHHHHHHHhc
Q 044402 100 VVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 100 a~~~~~~~~~~~Ll~~~ 116 (127)
|+..|+.+++++|++.+
T Consensus 147 A~~~~~~~~v~~Ll~~g 163 (228)
T 2dzn_A 147 AASVGSLKLIELLCGLG 163 (228)
T ss_dssp HHHTTCHHHHHHHHTTT
T ss_pred HHHcCCHHHHHHHHhcC
Confidence 66666666666666553
No 71
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=2.2e-25 Score=137.94 Aligned_cols=113 Identities=17% Similarity=0.189 Sum_probs=62.7
Q ss_pred CcchHHHHHHH--------hh-----hcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhh
Q 044402 2 GNTAFHESLFI--------IN-----RVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLAC 68 (127)
Q Consensus 2 g~~~lh~a~~~--------l~-----~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~ 68 (127)
|.||||+|+.. +. .+.+++.+|..|.||||+|+..++.+++++|++.|.++. ..+..|.||||+|+
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~ 87 (241)
T 1k1a_A 9 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPM-ALDRHGQTAAHLAC 87 (241)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHH
Confidence 55666666555 21 345555556666666666666666666666666555553 44555555555555
Q ss_pred hcCchHHHHHHHhccC----CCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 69 KNGHVKVMVEMLKKQH----CPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 69 ~~~~~~~~~~l~~~~~----~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
..++.+++++|++.+. +++..+..|.||||+|+..|+.+++++|++.
T Consensus 88 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 138 (241)
T 1k1a_A 88 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER 138 (241)
T ss_dssp HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 5555555555555544 4444555555555555555555555555554
No 72
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=9.2e-26 Score=141.32 Aligned_cols=117 Identities=15% Similarity=0.175 Sum_probs=101.5
Q ss_pred CCcchHHHHH---HH---------hhhc-----------CCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCccccc
Q 044402 1 MGNTAFHESL---FI---------INRV-----------TKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHN 57 (127)
Q Consensus 1 ~g~~~lh~a~---~~---------l~~~-----------~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~ 57 (127)
.|.||||+|+ +. +..+ .+++..|..|.||||+|+..|+.+++++|++.|+++. ..+
T Consensus 45 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~ 123 (260)
T 3jxi_A 45 TGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH-AQA 123 (260)
T ss_dssp TCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCC
T ss_pred CCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC-ccc
Confidence 3899999999 22 3333 2344566799999999999999999999999999986 555
Q ss_pred --------------ccCCChhhhhhhcCchHHHHHHHh---ccCCCCcccCCCCcHHHHHHhcCc---------HHHHHH
Q 044402 58 --------------IKTLYPIHLACKNGHVKVMVEMLK---KQHCPMFVTNSGYNILHFVVKNGH---------VNMVKA 111 (127)
Q Consensus 58 --------------~~~~t~l~~a~~~~~~~~~~~l~~---~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~ 111 (127)
..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..++ .+++++
T Consensus 124 ~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~ 203 (260)
T 3jxi_A 124 RGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDL 203 (260)
T ss_dssp EECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHH
T ss_pred cccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHH
Confidence 579999999999999999999999 999999999999999999998877 799999
Q ss_pred HHHh-ccc
Q 044402 112 IIKI-SET 118 (127)
Q Consensus 112 Ll~~-~~~ 118 (127)
|+++ .++
T Consensus 204 Ll~~ga~~ 211 (260)
T 3jxi_A 204 LLIKCAKL 211 (260)
T ss_dssp HHHHHHHH
T ss_pred HHHhCccc
Confidence 9988 544
No 73
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=6.2e-25 Score=138.49 Aligned_cols=118 Identities=15% Similarity=0.112 Sum_probs=108.9
Q ss_pred CcchHHHHHHH---------hhh-cCCCCccccCCchhHHHHHhcCC----HHHHHHHHHhcCCCcccccccCCChhhhh
Q 044402 2 GNTAFHESLFI---------INR-VTKWKTKDWNENIPLYFATSNTY----IRGVCFLLELNGHSAIEHNIKTLYPIHLA 67 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~-~~~~~~~d~~g~t~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~~~~~t~l~~a 67 (127)
|.||||.|+.. +.. +.+++.+|..|.||||+|+..++ .+++++|++.|.++. ..+..|.||||+|
T Consensus 148 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~-~~~~~g~t~L~~A 226 (285)
T 1wdy_A 148 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN-VRGERGKTPLILA 226 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSS-CCCTTSCCHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCC-CcCCCCCcHHHHH
Confidence 78999999998 334 88999999999999999999999 999999999999986 7888999999999
Q ss_pred hhcCchHHHHHHHh-ccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 68 CKNGHVKVMVEMLK-KQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 68 ~~~~~~~~~~~l~~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
+..|+.+++++|++ .|++++.++..|.||||+|+..|+.+++++|+++ .+++.
T Consensus 227 ~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 227 VEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp HHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCC
T ss_pred HHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 99999999999999 8999999999999999999999999999999999 44443
No 74
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=2e-25 Score=127.90 Aligned_cols=103 Identities=24% Similarity=0.301 Sum_probs=93.9
Q ss_pred cCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCc
Q 044402 16 VTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYN 95 (127)
Q Consensus 16 ~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t 95 (127)
|+++ .+|..|.||||+|+..++.+++++|++.+.++. ..+..|+||||+|+..++.+++++|++.|++++.++..|.|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 78 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPN-VKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDS 78 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCC
Confidence 4566 789999999999999999999999999999886 78889999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 96 ILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 96 ~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
|||+|+..|+.+++++|++. .+++.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~ 104 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNA 104 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999998 55443
No 75
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=2.3e-25 Score=127.62 Aligned_cols=104 Identities=14% Similarity=0.117 Sum_probs=96.7
Q ss_pred cCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCC-CC
Q 044402 16 VTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNS-GY 94 (127)
Q Consensus 16 ~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~~ 94 (127)
+.+++.+|..|.||||+|+..++.+++++|++.+.++. ..+..|+||||+|+. ++.+++++|++.|++++.++.. |.
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPN-ALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcC-CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 46788999999999999999999999999999999886 788899999999999 9999999999999999999999 99
Q ss_pred cHHHHHHhcCcHHHHHHHHHh-cccccc
Q 044402 95 NILHFVVKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 95 t~l~~a~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
||||+|+..|+.+++++|+++ .+++..
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 107 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARLDVC 107 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCCCCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCcc
Confidence 999999999999999999998 554443
No 76
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=6.5e-26 Score=144.08 Aligned_cols=112 Identities=16% Similarity=0.163 Sum_probs=75.6
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccC-CChhhhhhhcC
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKT-LYPIHLACKNG 71 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~t~l~~a~~~~ 71 (127)
|.||||+|+.. +..|++++.+|..|.||||+|+..++.+++++|++.|+++. ..+..| .||||+|+..|
T Consensus 62 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~~t~L~~A~~~~ 140 (285)
T 3kea_A 62 NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM-FYGKTGWKTSFYHAVMLN 140 (285)
T ss_dssp TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGG-GCSSSGGGSHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC-ccCCCCCCCHHHHHHHcC
Confidence 66777777765 45567777777777777777777777777777777777664 555556 57777777777
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+.+++++|++.|++.... ..|.||||+|+..|+.+++++|+++
T Consensus 141 ~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ 183 (285)
T 3kea_A 141 DVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDY 183 (285)
T ss_dssp CHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHc
Confidence 777777777666554211 2566666666666666666666665
No 77
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=4.7e-26 Score=147.18 Aligned_cols=120 Identities=17% Similarity=0.084 Sum_probs=102.7
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCC---HHHHHHHHHhc-CCCcccccccCCChhhhh
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTY---IRGVCFLLELN-GHSAIEHNIKTLYPIHLA 67 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~---~~~~~~ll~~~-~~~~~~~~~~~~t~l~~a 67 (127)
.|.||||+|+.. +..|++++.+|..|+||||+|+..++ .++++.|++.+ +++ ...+..|+||||+|
T Consensus 130 ~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~-~~~d~~g~tpLh~A 208 (327)
T 1sw6_A 130 HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCL-ILEDSMNRTILHHI 208 (327)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGG-GEECTTCCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccc-cCCCCCCCCHHHHH
Confidence 488999999987 66789999999999999999999998 67778888876 445 47888999999999
Q ss_pred hh----cCchHHHHHHHhccC---------------------------------------------CCCcccCCCCcHHH
Q 044402 68 CK----NGHVKVMVEMLKKQH---------------------------------------------CPMFVTNSGYNILH 98 (127)
Q Consensus 68 ~~----~~~~~~~~~l~~~~~---------------------------------------------~~~~~~~~~~t~l~ 98 (127)
+. .|+.+++++|++.+. +++.+|..|+||||
T Consensus 209 ~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh 288 (327)
T 1sw6_A 209 IITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLN 288 (327)
T ss_dssp HHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHH
T ss_pred HHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHH
Confidence 98 899999999988743 57788899999999
Q ss_pred HHHhcCcHHHHHHHHHh-cccccc
Q 044402 99 FVVKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 99 ~a~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
+|+..|+.+++++|+++ .+++..
T Consensus 289 ~A~~~g~~~~v~~Ll~~Gad~~~~ 312 (327)
T 1sw6_A 289 IAARLGNISIVDALLDYGADPFIA 312 (327)
T ss_dssp HHHHHCCHHHHHHHHHTTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCccc
Confidence 99999999999999998 555444
No 78
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.93 E-value=3.8e-25 Score=140.24 Aligned_cols=113 Identities=14% Similarity=0.165 Sum_probs=101.8
Q ss_pred chHHHHHHH---------hhhcCC------CCccccCCchhHHHHHhc---CCHHHHHHHHHhcCCCcccccccCCChhh
Q 044402 4 TAFHESLFI---------INRVTK------WKTKDWNENIPLYFATSN---TYIRGVCFLLELNGHSAIEHNIKTLYPIH 65 (127)
Q Consensus 4 ~~lh~a~~~---------l~~~~~------~~~~d~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~t~l~ 65 (127)
++|+.|+.. +..+.+ ++..|..|.||||+|+.. ++.+++++|++.|++++ .++..|+||||
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in-~~d~~g~TpLh 210 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD-KQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT-CCCTTCCCHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcc-ccCCCCCCHHH
Confidence 467777766 455666 444588999999999999 89999999999999986 78999999999
Q ss_pred hhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhcc
Q 044402 66 LACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKISE 117 (127)
Q Consensus 66 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~ 117 (127)
+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++++.
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999843
No 79
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=1.9e-25 Score=140.85 Aligned_cols=118 Identities=15% Similarity=0.201 Sum_probs=102.1
Q ss_pred CCcchHHHHHH----H--------hhhcCC-------CC----ccccCCchhHHHHHhcCCHHHHHHHHHhcCCCccccc
Q 044402 1 MGNTAFHESLF----I--------INRVTK-------WK----TKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHN 57 (127)
Q Consensus 1 ~g~~~lh~a~~----~--------l~~~~~-------~~----~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~ 57 (127)
.|.||||+|+. . +..+++ ++ .+|..|.||||+|+..++.+++++|++.|+++. ..+
T Consensus 53 ~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~-~~~ 131 (273)
T 2pnn_A 53 TGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ-AAA 131 (273)
T ss_dssp TCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCB
T ss_pred CCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC-ccc
Confidence 48899999995 2 344433 22 266789999999999999999999999999986 555
Q ss_pred c--------------cCCChhhhhhhcCchHHHHHHHh---ccCCCCcccCCCCcHHHHHHhcCc---------HHHHHH
Q 044402 58 I--------------KTLYPIHLACKNGHVKVMVEMLK---KQHCPMFVTNSGYNILHFVVKNGH---------VNMVKA 111 (127)
Q Consensus 58 ~--------------~~~t~l~~a~~~~~~~~~~~l~~---~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~ 111 (127)
. .|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+ .+++++
T Consensus 132 ~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~ 211 (273)
T 2pnn_A 132 NGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNE 211 (273)
T ss_dssp CSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHH
T ss_pred cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHH
Confidence 4 79999999999999999999999 999999999999999999999887 799999
Q ss_pred HHHh-cccc
Q 044402 112 IIKI-SETN 119 (127)
Q Consensus 112 Ll~~-~~~~ 119 (127)
|+++ .+++
T Consensus 212 Ll~~ga~~n 220 (273)
T 2pnn_A 212 ILILGAKLH 220 (273)
T ss_dssp HHHHHHHHC
T ss_pred HHHhhhhcc
Confidence 9988 5554
No 80
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=5.3e-25 Score=142.40 Aligned_cols=59 Identities=22% Similarity=0.319 Sum_probs=35.5
Q ss_pred cccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 57 NIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 57 ~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 244 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 302 (351)
T 3utm_A 244 NKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSY 302 (351)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 34455566666666666666666666666666666666666666666666666666655
No 81
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=4.5e-25 Score=142.75 Aligned_cols=117 Identities=20% Similarity=0.268 Sum_probs=107.3
Q ss_pred CcchHHHHHHH--------hh--hcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 2 GNTAFHESLFI--------IN--RVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 2 g~~~lh~a~~~--------l~--~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
|.++||.|+.. ++ .+.+++.+|..|.||||+|+..|+.+++++|++.|.++. ..+..|+||||+|+..|
T Consensus 24 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g 102 (351)
T 3utm_A 24 KKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVH-AKDKGGLVPLHNACSYG 102 (351)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTT
T ss_pred cchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCcHHHHHHHCC
Confidence 56899999998 22 357788899999999999999999999999999999986 78889999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~ 119 (127)
+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++ .+++
T Consensus 103 ~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 151 (351)
T 3utm_A 103 HYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT 151 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 99999999999999999999999999999999999999999998 4443
No 82
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.93 E-value=5.2e-25 Score=149.13 Aligned_cols=115 Identities=15% Similarity=0.142 Sum_probs=104.7
Q ss_pred chHHHHHHH---------hhhcCCCCcc------ccCCchhHHHHHh---cCCHHHHHHHHHhcCCCcccccccCCChhh
Q 044402 4 TAFHESLFI---------INRVTKWKTK------DWNENIPLYFATS---NTYIRGVCFLLELNGHSAIEHNIKTLYPIH 65 (127)
Q Consensus 4 ~~lh~a~~~---------l~~~~~~~~~------d~~g~t~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~ 65 (127)
+.||.|+.. +..|++++.. |..|.||||+|+. .++.+++++|++.|++++ ..+..|+||||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn-~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD-AKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTT-CCCSSSCCHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCC-ccCCCCCcHHH
Confidence 458999888 6678888877 8899999999966 999999999999999996 78999999999
Q ss_pred hhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccc
Q 044402 66 LACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 66 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~ 119 (127)
+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++ .+.+
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTF 267 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999999998 4443
No 83
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.93 E-value=1.7e-25 Score=146.06 Aligned_cols=99 Identities=12% Similarity=0.214 Sum_probs=92.4
Q ss_pred cccCCchhHHHHHhcC--CHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCC-----CCcccCCCC
Q 044402 22 KDWNENIPLYFATSNT--YIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHC-----PMFVTNSGY 94 (127)
Q Consensus 22 ~d~~g~t~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~-----~~~~~~~~~ 94 (127)
+|..|.||||+|+..+ +.+++++|++.|+++. ..+..|.||||+|+..|+.+++++|++.|++ ++..+..|+
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~ 212 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT-AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGN 212 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCC
Confidence 8889999999999999 9999999999999986 7888999999999999999999999999998 899999999
Q ss_pred cHHHHHHhcCcHHHHHHHHHh-cccccc
Q 044402 95 NILHFVVKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 95 t~l~~a~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
||||+|+..|+.+++++|+++ .+++..
T Consensus 213 t~L~~A~~~g~~~~v~~Ll~~gad~~~~ 240 (364)
T 3ljn_A 213 SHLHWAILINWEDVAMRFVEMGIDVNME 240 (364)
T ss_dssp CTTHHHHTTTCHHHHHHHHTTTCCTTCC
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCC
Confidence 999999999999999999998 555543
No 84
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=4.8e-25 Score=144.64 Aligned_cols=114 Identities=17% Similarity=0.221 Sum_probs=103.9
Q ss_pred CCcchHHHHHHH------------hhhcCCCCc--------cccCCchhHHHHHhcCCHHHHHHHHHhc-CCCccccccc
Q 044402 1 MGNTAFHESLFI------------INRVTKWKT--------KDWNENIPLYFATSNTYIRGVCFLLELN-GHSAIEHNIK 59 (127)
Q Consensus 1 ~g~~~lh~a~~~------------l~~~~~~~~--------~d~~g~t~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~ 59 (127)
.|.||||+|+.. +..+++++. +|..|.||||+|+..++.+++++|++.+ .++. ..+..
T Consensus 234 ~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n-~~d~~ 312 (373)
T 2fo1_E 234 NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD-KQDED 312 (373)
T ss_dssp TSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTT-CCCTT
T ss_pred CCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCcc-CcCCC
Confidence 478999999862 556777775 6778999999999999999999999987 7765 78899
Q ss_pred CCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 60 TLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 60 ~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
|+||||+|+..|+.+++++|++.|++++.+|..|.|||++|+..|+.+++++|+++
T Consensus 313 g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~ 368 (373)
T 2fo1_E 313 GKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC 368 (373)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999987
No 85
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=5.4e-25 Score=138.75 Aligned_cols=118 Identities=18% Similarity=0.119 Sum_probs=108.9
Q ss_pred CcchHHHHHHH---------hhhcCCCCcc-ccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 2 GNTAFHESLFI---------INRVTKWKTK-DWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~-d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
|.||||.|+.. +..+.+++.. +..|.||||+|+..++.+++++|++.|.++. ..+..|.||||+|+..|
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV-LRKKNGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcC
Confidence 68999999998 5667888887 7889999999999999999999999999986 78889999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-ccccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 120 (127)
+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++. .+++.
T Consensus 84 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 133 (285)
T 1wdy_A 84 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNL 133 (285)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCccc
Confidence 99999999999999999999999999999999999999999998 54443
No 86
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=1.1e-24 Score=134.40 Aligned_cols=119 Identities=17% Similarity=0.242 Sum_probs=107.5
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+|.||||.|+.. +..+.+++.++..|.||||+|+..++.+++++|++.+.+.....+..+.|||++|+..|
T Consensus 8 ~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 87 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQG 87 (240)
T ss_dssp GGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHT
T ss_pred ccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcC
Confidence 367999999988 56788999999999999999999999999999999999886555566999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccc
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETN 119 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~ 119 (127)
+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++ .+++
T Consensus 88 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~ 136 (240)
T 3eu9_A 88 HLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD 136 (240)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc
Confidence 99999999999999999999999999999999999999999988 4443
No 87
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.92 E-value=3.1e-25 Score=141.22 Aligned_cols=113 Identities=13% Similarity=0.140 Sum_probs=106.5
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.||||.|+.. +..+++++..|..|.||||+|+..|+.+++++|++.|+++. ..+..|+||||+|+..|+
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~tpL~~A~~~g~ 118 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANIN-QPDNEGWIPLHAAASCGY 118 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTC
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHcCC
Confidence 56899999988 66789999999999999999999999999999999999986 788899999999999999
Q ss_pred hHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 73 VKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 73 ~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
.+++++|++.|++++..+..|.||||+|+..+..++++.++..
T Consensus 119 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~ 161 (299)
T 1s70_B 119 LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNR 161 (299)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998876
No 88
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=1.1e-24 Score=139.53 Aligned_cols=112 Identities=14% Similarity=0.139 Sum_probs=103.9
Q ss_pred chHHHHHHH---------hhhcCCCCc------cccCCchhHHHHHhc---CCHHHHHHHHHhcCCCcccccccCCChhh
Q 044402 4 TAFHESLFI---------INRVTKWKT------KDWNENIPLYFATSN---TYIRGVCFLLELNGHSAIEHNIKTLYPIH 65 (127)
Q Consensus 4 ~~lh~a~~~---------l~~~~~~~~------~d~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~t~l~ 65 (127)
++|+.|+.. +..+.+++. .+..|.||||+|+.. ++.+++++|+++|++++ ..+..|+||||
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn-~~d~~G~TpLh 231 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD-AKAADGNTALH 231 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTT-CCCTTCCCHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCC-CCCCCCCCHHH
Confidence 469999877 566788887 689999999999997 89999999999999986 78899999999
Q ss_pred hhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 66 LACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 66 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
+|+..|+.+++++|++.|++++.+|..|.|||++|+..++.+++++|++++
T Consensus 232 ~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g 282 (301)
T 2b0o_E 232 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ 282 (301)
T ss_dssp HHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999883
No 89
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.92 E-value=4.8e-25 Score=144.38 Aligned_cols=113 Identities=15% Similarity=0.137 Sum_probs=105.5
Q ss_pred cchHHHHHHH----------hhhcCCCCccc--cCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhc
Q 044402 3 NTAFHESLFI----------INRVTKWKTKD--WNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKN 70 (127)
Q Consensus 3 ~~~lh~a~~~----------l~~~~~~~~~d--~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~ 70 (127)
.|+||.|+.. +..|++++..+ ..|.||||+|+..++.+++++|+++|++++ ..+..|+||||+|+..
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn-~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVN-QADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHH
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHc
Confidence 3689988764 66789999988 899999999999999999999999999996 7899999999999999
Q ss_pred CchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHhc
Q 044402 71 GHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKIS 116 (127)
Q Consensus 71 ~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 116 (127)
|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|++.+
T Consensus 279 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999763
No 90
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.92 E-value=6.5e-25 Score=144.02 Aligned_cols=119 Identities=21% Similarity=0.214 Sum_probs=109.4
Q ss_pred CCcchHHHHHHH--------h---------hhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCCh
Q 044402 1 MGNTAFHESLFI--------I---------NRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYP 63 (127)
Q Consensus 1 ~g~~~lh~a~~~--------l---------~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~ 63 (127)
.|+||||+|+.. + ..|++++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|.||
T Consensus 124 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~-~~~~~g~t~ 202 (373)
T 2fo1_E 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPT-IYNKSERSA 202 (373)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTCCCH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCc-ccCCCCCCH
Confidence 488999999987 2 4688999999999999999999999999999999999986 788899999
Q ss_pred hhhhhhcCchHHHHHHHhcc---CCCCcccCCCCcHHHHHHhcC---cHHHHHHHHHh-ccccc
Q 044402 64 IHLACKNGHVKVMVEMLKKQ---HCPMFVTNSGYNILHFVVKNG---HVNMVKAIIKI-SETNI 120 (127)
Q Consensus 64 l~~a~~~~~~~~~~~l~~~~---~~~~~~~~~~~t~l~~a~~~~---~~~~~~~Ll~~-~~~~~ 120 (127)
||+|+..|+.+++++|++.+ ++++..+..|.||||+|+..+ +.+++++|++. .+++.
T Consensus 203 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~ 266 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDY 266 (373)
T ss_dssp HHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSC
T ss_pred HHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccc
Confidence 99999999999999999988 789999999999999999998 89999999998 55543
No 91
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.92 E-value=6.1e-25 Score=122.42 Aligned_cols=101 Identities=27% Similarity=0.270 Sum_probs=94.0
Q ss_pred ccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHH
Q 044402 21 TKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFV 100 (127)
Q Consensus 21 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a 100 (127)
.+|..|.||||+|+..++.+++++|++.+.++. ..+..|+||||+|+..++.+++++|++.|++++.++..|.|||++|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVN-ARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSS-CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 578999999999999999999999999999886 7888999999999999999999999999999999999999999999
Q ss_pred HhcCcHHHHHHHHHh-ccccccc
Q 044402 101 VKNGHVNMVKAIIKI-SETNISM 122 (127)
Q Consensus 101 ~~~~~~~~~~~Ll~~-~~~~~~~ 122 (127)
+..++.+++++|+++ .+++...
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~ 105 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARS 105 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHS
T ss_pred HHCCCHHHHHHHHHcCCCCCcCC
Confidence 999999999999998 6555543
No 92
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.92 E-value=8.2e-24 Score=136.85 Aligned_cols=113 Identities=15% Similarity=0.082 Sum_probs=70.4
Q ss_pred CcchHHHHHHH--------hh--hcCCCCccccCCchhHHHHHhcCC----HHHHHHHHHhcCCCcccccccCCChhhhh
Q 044402 2 GNTAFHESLFI--------IN--RVTKWKTKDWNENIPLYFATSNTY----IRGVCFLLELNGHSAIEHNIKTLYPIHLA 67 (127)
Q Consensus 2 g~~~lh~a~~~--------l~--~~~~~~~~d~~g~t~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~~~~~t~l~~a 67 (127)
|.||||+|+.. |+ .|++++.+|..|.|++++++..+. ..++++|++.|+++. .++..|+||||+|
T Consensus 168 g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n-~~d~~g~t~L~~a 246 (337)
T 4g8k_A 168 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN-VRGERGKTPLILA 246 (337)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTT-CCCGGGCCHHHHH
T ss_pred CCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCC-CcCCCCCCHHHHH
Confidence 66778777776 22 256666666666666666544332 235566666666664 5566666666666
Q ss_pred hhcCchHHHHHHHhc-cCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 68 CKNGHVKVMVEMLKK-QHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 68 ~~~~~~~~~~~l~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+..|+.+++++|+.. |++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 247 ~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 295 (337)
T 4g8k_A 247 VEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 295 (337)
T ss_dssp HHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT
T ss_pred HHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 666666666666653 566666666666666666666666666666665
No 93
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=6.4e-24 Score=119.59 Aligned_cols=99 Identities=16% Similarity=0.114 Sum_probs=89.0
Q ss_pred cccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHH
Q 044402 22 KDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVV 101 (127)
Q Consensus 22 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 101 (127)
.+..|.||||+|+..++.+++++|++.+.++. ..+..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVN-RTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCTT-SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCcC-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 35678899999999999999999999999886 78889999999999999999999999999999999999999999999
Q ss_pred hcCcHHHHHHHHHh-cccccc
Q 044402 102 KNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 102 ~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
..++.+++++|+++ .+++..
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~~~ 102 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKTVK 102 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTTCC
T ss_pred HcCCHHHHHHHHHcCCCCCCc
Confidence 99999999999998 554443
No 94
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.91 E-value=1.2e-23 Score=129.85 Aligned_cols=113 Identities=13% Similarity=0.091 Sum_probs=66.9
Q ss_pred CcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc
Q 044402 2 GNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH 72 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 72 (127)
|.||||.|+.. +..+++++.++..|.||||+|+..++.+++++|++.+.++. ..+..|.||||+|+..++
T Consensus 76 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-~~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 76 NSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD-MMDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHCC
T ss_pred CCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc-ccCCCCCcHHHHHHHhCC
Confidence 56777777776 44566777777777777777777777777777777776553 344445555555543333
Q ss_pred -hHHHHHHHhccCCCCcccC-CCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 73 -VKVMVEMLKKQHCPMFVTN-SGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 73 -~~~~~~l~~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
.+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++
T Consensus 155 ~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 199 (240)
T 3eu9_A 155 SVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA 199 (240)
T ss_dssp SSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 4444444444444444443 455555555555555555555544
No 95
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.91 E-value=1.1e-23 Score=136.29 Aligned_cols=115 Identities=16% Similarity=0.158 Sum_probs=100.3
Q ss_pred CCcchHHHHHHH-------------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHh-cCCCcccccccCCChhhh
Q 044402 1 MGNTAFHESLFI-------------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLEL-NGHSAIEHNIKTLYPIHL 66 (127)
Q Consensus 1 ~g~~~lh~a~~~-------------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~t~l~~ 66 (127)
.|.|++|.++.. +..|++++.+|..|.||||+|+..++.+++++|++. +.++. .++..|+||||+
T Consensus 201 ~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn-~~d~~G~TpL~~ 279 (337)
T 4g8k_A 201 MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN-DTDSDGKTALLL 279 (337)
T ss_dssp TSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTT-CBCTTSCBHHHH
T ss_pred CCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCccc-CcCCCCCCHHHH
Confidence 378999887654 457899999999999999999999999999999985 66665 788999999999
Q ss_pred hhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh-cccccc
Q 044402 67 ACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 67 a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
|+..|+.+++++|++.|++++.+ +||++|+..|+.+++++|+++ .+++..
T Consensus 280 A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 280 AVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp HHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred HHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence 99999999999999999988654 599999999999999999999 566553
No 96
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.91 E-value=8.4e-24 Score=113.78 Aligned_cols=84 Identities=27% Similarity=0.353 Sum_probs=77.4
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+|+||||+|+.. +..+++++.+|..|.||||+|+..++.+++++|++.|+++. .++..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcC
Confidence 589999999988 56789999999999999999999999999999999999986 78899999999999999
Q ss_pred chHHHHHHHhccCC
Q 044402 72 HVKVMVEMLKKQHC 85 (127)
Q Consensus 72 ~~~~~~~l~~~~~~ 85 (127)
+.+++++|++.|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999998864
No 97
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=1e-24 Score=131.00 Aligned_cols=118 Identities=10% Similarity=0.035 Sum_probs=99.7
Q ss_pred CcchHHHHHHH--------hhhcCCCCccc-cCCchhHHHHHhcCCH----HHHHHHHHhcCCCcccccccCCChhhhhh
Q 044402 2 GNTAFHESLFI--------INRVTKWKTKD-WNENIPLYFATSNTYI----RGVCFLLELNGHSAIEHNIKTLYPIHLAC 68 (127)
Q Consensus 2 g~~~lh~a~~~--------l~~~~~~~~~d-~~g~t~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~~t~l~~a~ 68 (127)
+.++|+.|++. +.+ .+++..+ ..|+||||+|+..++. +++++|++.|+++. .++..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~-~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn-~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFE-KGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIK-SRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHH-HSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSS-CCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHh-cCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCC-CCCCCCCcHHHHHH
Confidence 56889999988 222 3455666 7899999999999975 58999999999996 78899999999999
Q ss_pred hcCc------hHHHHHHHhccCCCCcccCCCC-cHHHHHHhcC-----cHHHHHHHHH-h-cccccc
Q 044402 69 KNGH------VKVMVEMLKKQHCPMFVTNSGY-NILHFVVKNG-----HVNMVKAIIK-I-SETNIS 121 (127)
Q Consensus 69 ~~~~------~~~~~~l~~~~~~~~~~~~~~~-t~l~~a~~~~-----~~~~~~~Ll~-~-~~~~~~ 121 (127)
..++ .+++++|++.|++++.+|..|+ ||||+|+..+ ..+++++|++ + .+++..
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~ 150 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIK 150 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCC
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCccc
Confidence 9887 5789999999999999999999 9999999944 4679999998 6 555443
No 98
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.90 E-value=1.8e-23 Score=115.84 Aligned_cols=92 Identities=18% Similarity=0.216 Sum_probs=84.8
Q ss_pred CccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHH
Q 044402 20 KTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHF 99 (127)
Q Consensus 20 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~ 99 (127)
.-.|..|.||||+|+..++.+++++|++.++++. ..+..|+||||+|+..|+.+++++|++.|++++.++..|.||||+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~-~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVA-AKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 3467889999999999999999999999999886 788899999999999999999999999999999999999999999
Q ss_pred HHhcCcHHHHHHH
Q 044402 100 VVKNGHVNMVKAI 112 (127)
Q Consensus 100 a~~~~~~~~~~~L 112 (127)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999999999887
No 99
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.90 E-value=3.9e-23 Score=127.72 Aligned_cols=109 Identities=10% Similarity=0.058 Sum_probs=94.1
Q ss_pred hhhcCCCCc---cccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcc
Q 044402 13 INRVTKWKT---KDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFV 89 (127)
Q Consensus 13 l~~~~~~~~---~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~ 89 (127)
+.++.+++. .+..+.||||+|+..|+.+++++|++.|+++. ..+..|+||||+|+..|+.+++++|++.|++++.+
T Consensus 5 l~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~ 83 (229)
T 2vge_A 5 LRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPS-QPNEEGITALHNAICGANYSIVDFLITAGANVNSP 83 (229)
T ss_dssp -----CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred hccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 345666554 44567788999999999999999999999886 78899999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHhcCcHHHHHHHHHh-ccccccc
Q 044402 90 TNSGYNILHFVVKNGHVNMVKAIIKI-SETNISM 122 (127)
Q Consensus 90 ~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~ 122 (127)
|..|+||||+|+..|+.+++++|++. .+++...
T Consensus 84 d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~ 117 (229)
T 2vge_A 84 DSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117 (229)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc
Confidence 99999999999999999999999998 5655543
No 100
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=2.9e-23 Score=118.78 Aligned_cols=98 Identities=20% Similarity=0.256 Sum_probs=89.8
Q ss_pred cccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHH
Q 044402 22 KDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVV 101 (127)
Q Consensus 22 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 101 (127)
....+.||||+|+..|+.+++++|++.+.++. ..+..|+||||+|+..++.+++++|++.|++++.++..|.||||+|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVN-AKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 45668899999999999999999999999986 78889999999999999999999999999999999999999999999
Q ss_pred hcCcHHHHHHHHHh-ccccc
Q 044402 102 KNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 102 ~~~~~~~~~~Ll~~-~~~~~ 120 (127)
..|+.+++++|+++ .+++.
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~ 108 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNA 108 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTC
T ss_pred HcCCHHHHHHHHHcCCCCcC
Confidence 99999999999998 45443
No 101
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.90 E-value=1.2e-23 Score=117.11 Aligned_cols=96 Identities=22% Similarity=0.170 Sum_probs=87.5
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+|.||||.|+.. +..+.+++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|+|||++|+..+
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~d~~g~tpl~~A~~~~ 86 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN-ARSKDGNTPEHLAKKNG 86 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT-CCCTTCCCTTHHHHTTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHCC
Confidence 489999999988 55678999999999999999999999999999999999986 78889999999999999
Q ss_pred chHHHHHHHhccCCCCcccCCCCcHH
Q 044402 72 HVKVMVEMLKKQHCPMFVTNSGYNIL 97 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~~~~~~~t~l 97 (127)
+.+++++|++.|++++.++..+.+|-
T Consensus 87 ~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 87 HHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp CHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999998874
No 102
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=8.1e-23 Score=119.40 Aligned_cols=100 Identities=15% Similarity=0.127 Sum_probs=89.2
Q ss_pred CccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCc-HHH
Q 044402 20 KTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYN-ILH 98 (127)
Q Consensus 20 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t-~l~ 98 (127)
+..+..|.||||+|+..|+.+++++|++.|.++. ..+..|+||||+|+ .|+.+++++|++.|++++.++..|.| |||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPN-APNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVH 83 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTT-CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHH
Confidence 4567889999999999999999999999999886 78889999999986 99999999999999999999999999 999
Q ss_pred HHHhcCcHHHHHHHHHh-cccccc
Q 044402 99 FVVKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 99 ~a~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
+|+..|+.+++++|+++ .+++..
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~~ 107 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRAGARLDVR 107 (156)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSSCC
T ss_pred HHHHCCCHHHHHHHHHcCCCCccc
Confidence 99999999999999998 554443
No 103
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=2.1e-22 Score=113.30 Aligned_cols=95 Identities=28% Similarity=0.441 Sum_probs=88.7
Q ss_pred CCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcC
Q 044402 25 NENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNG 104 (127)
Q Consensus 25 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 104 (127)
+|.||||+|+..++.+++++|++.+.++. ..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 48999999999999999999999999885 67889999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHh-ccccc
Q 044402 105 HVNMVKAIIKI-SETNI 120 (127)
Q Consensus 105 ~~~~~~~Ll~~-~~~~~ 120 (127)
+.+++++|+++ .+++.
T Consensus 80 ~~~~~~~Ll~~g~~~~~ 96 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNA 96 (126)
T ss_dssp CHHHHHHHHHTTCCTTC
T ss_pred hHHHHHHHHHcCCCCcc
Confidence 99999999998 44443
No 104
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=8.2e-23 Score=125.43 Aligned_cols=99 Identities=14% Similarity=0.126 Sum_probs=91.6
Q ss_pred cccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhc-cCCCCcccCCCCcHHHHH
Q 044402 22 KDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKK-QHCPMFVTNSGYNILHFV 100 (127)
Q Consensus 22 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~~t~l~~a 100 (127)
.+..|.||||+|+..|+.+++++|++.+.++. ..+..|+||||+|+..|+.+++++|++. |++++.++..|+||||+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVN-GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAA 147 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHH
Confidence 45678999999999999999999999999886 7888999999999999999999999999 999999999999999999
Q ss_pred HhcCcHHHHHHHHHh-cccccc
Q 044402 101 VKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 101 ~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
+..|+.+++++|+++ .+++..
T Consensus 148 ~~~~~~~~v~~Ll~~ga~~~~~ 169 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGARTDLR 169 (222)
T ss_dssp HHHTCHHHHHHHHHHTCCSCCC
T ss_pred HHcCCHHHHHHHHHcCCCCccc
Confidence 999999999999998 555443
No 105
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=8e-23 Score=122.29 Aligned_cols=98 Identities=12% Similarity=0.125 Sum_probs=89.7
Q ss_pred cccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCccc-CCCCcHHHHH
Q 044402 22 KDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVT-NSGYNILHFV 100 (127)
Q Consensus 22 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~t~l~~a 100 (127)
.+..|.||||+|+..|+.+++++|++ +.++. ..+..|+||||+|+..|+.+++++|++.|++++.++ ..|+||||+|
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDVD-AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence 35688999999999999999999999 88775 788999999999999999999999999999999888 8999999999
Q ss_pred HhcCcHHHHHHHHHh-cccccc
Q 044402 101 VKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 101 ~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
+..|+.+++++|+++ .+++..
T Consensus 118 ~~~~~~~~v~~Ll~~ga~~~~~ 139 (183)
T 3deo_A 118 AGYVRPEVVEALVELGADIEVE 139 (183)
T ss_dssp HHTTCHHHHHHHHHHTCCTTCC
T ss_pred HhcCcHHHHHHHHHcCCCCcCC
Confidence 999999999999998 555433
No 106
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.88 E-value=1.4e-22 Score=130.93 Aligned_cols=102 Identities=19% Similarity=0.155 Sum_probs=93.9
Q ss_pred hhhcCCCCc-cccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCc---hHHHHHHHhcc-CCCC
Q 044402 13 INRVTKWKT-KDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGH---VKVMVEMLKKQ-HCPM 87 (127)
Q Consensus 13 l~~~~~~~~-~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~---~~~~~~l~~~~-~~~~ 87 (127)
+..+++++. +|..|.||||+|+..|+.+++++|++.|+++. ..+..|+||||+|+..|+ .++++.|++.+ .+++
T Consensus 117 ~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n-~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~ 195 (327)
T 1sw6_A 117 PNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL-YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI 195 (327)
T ss_dssp TTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG
T ss_pred HhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcccc
Confidence 456789999 89999999999999999999999999999996 789999999999999999 78888888876 6789
Q ss_pred cccCCCCcHHHHHHh----cCcHHHHHHHHHh
Q 044402 88 FVTNSGYNILHFVVK----NGHVNMVKAIIKI 115 (127)
Q Consensus 88 ~~~~~~~t~l~~a~~----~~~~~~~~~Ll~~ 115 (127)
.++..|+||||+|+. .|+.+++++|++.
T Consensus 196 ~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 196 LEDSMNRTILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHccccccHHHHHHHHHH
Confidence 999999999999999 8999999999977
No 107
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.88 E-value=4.4e-24 Score=140.19 Aligned_cols=114 Identities=15% Similarity=0.180 Sum_probs=92.9
Q ss_pred CcchHHHHHHH---------hhhcCCC---CccccCCchhHHHHHhcCCHHHHHHHHHhcCCCc--ccccccCCChhhhh
Q 044402 2 GNTAFHESLFI---------INRVTKW---KTKDWNENIPLYFATSNTYIRGVCFLLELNGHSA--IEHNIKTLYPIHLA 67 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~~---~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~--~~~~~~~~t~l~~a 67 (127)
+.||||.|+.. +..+.+. +..+..|.||||+|+.+|+.+++++|++.|++.. ...... +||||+|
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~A 170 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLA 170 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHH
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHH
Confidence 46999999998 3344422 2345678899999999999999999999997521 122223 8999999
Q ss_pred hhcCchHHHHHHHhccCCCCc--ccCCCCcHHHHHH-hcCcHHHHHHHHHhc
Q 044402 68 CKNGHVKVMVEMLKKQHCPMF--VTNSGYNILHFVV-KNGHVNMVKAIIKIS 116 (127)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~~~--~~~~~~t~l~~a~-~~~~~~~~~~Ll~~~ 116 (127)
+..|+.+++++|++.|++++. .+..|.||||+|+ ..|+.+++++|++.+
T Consensus 171 a~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g 222 (376)
T 2aja_A 171 AENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 222 (376)
T ss_dssp HHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH
T ss_pred HHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC
Confidence 999999999999999999876 8888999999999 999999999999763
No 108
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=2.2e-22 Score=125.32 Aligned_cols=96 Identities=13% Similarity=0.133 Sum_probs=88.7
Q ss_pred ccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcCchHHHHHHHhccCCCCccc-CCCCcHHHHHH
Q 044402 23 DWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVT-NSGYNILHFVV 101 (127)
Q Consensus 23 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~t~l~~a~ 101 (127)
+..|.||||+|+..|+.+++++|++ +.++. ..+..|+||||+|+..|+.+++++|++.|++++.++ ..|.||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVD-AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTT-CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCC-CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 4578999999999999999999999 88875 788999999999999999999999999999999888 88999999999
Q ss_pred hcCcHHHHHHHHHh-ccccc
Q 044402 102 KNGHVNMVKAIIKI-SETNI 120 (127)
Q Consensus 102 ~~~~~~~~~~Ll~~-~~~~~ 120 (127)
..|+.+++++|+++ .+++.
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~ 139 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEV 139 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTC
T ss_pred HcCCHHHHHHHHHCCCCCCC
Confidence 99999999999998 55543
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=7.8e-23 Score=130.92 Aligned_cols=99 Identities=15% Similarity=0.006 Sum_probs=84.0
Q ss_pred CCcchHHHHHHH------------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhh
Q 044402 1 MGNTAFHESLFI------------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLAC 68 (127)
Q Consensus 1 ~g~~~lh~a~~~------------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~ 68 (127)
.|.||||+|+.. +..|++++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|.|||++|+
T Consensus 189 ~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~ 267 (301)
T 2b0o_E 189 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIAR 267 (301)
T ss_dssp CEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCS-CCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHH
Confidence 378999999962 56789999999999999999999999999999999999996 78999999999999
Q ss_pred hcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcH
Q 044402 69 KNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHV 106 (127)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~ 106 (127)
..++.+++++|++.|++ .|.||||+|+..|+.
T Consensus 268 ~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 268 KKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 99999999999998865 589999999988763
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=1.3e-20 Score=127.72 Aligned_cols=97 Identities=13% Similarity=-0.012 Sum_probs=78.2
Q ss_pred CCcchHHHHHH---H---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhh
Q 044402 1 MGNTAFHESLF---I---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLAC 68 (127)
Q Consensus 1 ~g~~~lh~a~~---~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~ 68 (127)
.|.||||+|+. . +..|++++.+|..|.||||+|+..|+.+++++|+++|+++. ..+..|+||||+|+
T Consensus 170 ~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~ 248 (497)
T 3lvq_E 170 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIAR 248 (497)
T ss_dssp SCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCS-CCCTTCCCHHHHHH
T ss_pred ccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHH
Confidence 48899999976 2 66889999999999999999999999999999999999996 78999999999999
Q ss_pred hcCchHHHHHHHhccCCCCcccCCCCcHHH
Q 044402 69 KNGHVKVMVEMLKKQHCPMFVTNSGYNILH 98 (127)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~ 98 (127)
..|+.+++++|++.|++++..+.+..+++.
T Consensus 249 ~~~~~~~~~~Ll~~ga~~~~~~~h~~~~~~ 278 (497)
T 3lvq_E 249 KKHHKECEELLEQAQAGTFAFPLHVDYSWV 278 (497)
T ss_dssp HTTCHHHHHHHHHTCC--------------
T ss_pred HcCCHHHHHHHHHhCCCCCCCcceeecccc
Confidence 999999999999999998775444444333
No 111
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=5.9e-20 Score=116.41 Aligned_cols=85 Identities=12% Similarity=0.053 Sum_probs=79.2
Q ss_pred CCcchHHHHHHH------------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhh
Q 044402 1 MGNTAFHESLFI------------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLAC 68 (127)
Q Consensus 1 ~g~~~lh~a~~~------------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~ 68 (127)
.|.||||+|+.. +..|++++.+|..|.||||+|+..|+.+++++|++.|+++. .++..|.||||+|+
T Consensus 168 ~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~g~tpL~~A~ 246 (278)
T 1dcq_A 168 PDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIE-IANESGETPLDIAK 246 (278)
T ss_dssp TTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHH
T ss_pred CCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CccCCCCCHHHHHH
Confidence 389999999974 56789999999999999999999999999999999999996 78999999999999
Q ss_pred hcCchHHHHHHHhccCCC
Q 044402 69 KNGHVKVMVEMLKKQHCP 86 (127)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~ 86 (127)
..|+.+++++|++.|++.
T Consensus 247 ~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 247 RLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HTTCHHHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHcCCCC
Confidence 999999999999998764
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.81 E-value=2e-22 Score=132.33 Aligned_cols=105 Identities=16% Similarity=0.044 Sum_probs=89.9
Q ss_pred CcchHHHHHHH---------hhhcCC---CCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCccc--ccccCCChhhhh
Q 044402 2 GNTAFHESLFI---------INRVTK---WKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIE--HNIKTLYPIHLA 67 (127)
Q Consensus 2 g~~~lh~a~~~---------l~~~~~---~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~--~~~~~~t~l~~a 67 (127)
|.||||+|+.. +..+++ .+..+.. .||||+|+..|+.+++++|+++|+++. . .+..|+||||+|
T Consensus 128 ~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~-~~~~d~~g~TpL~~A 205 (376)
T 2aja_A 128 NYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEA-TAMIQAENYYAFRWA 205 (376)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccc-hhccCCCCCCHHHHH
Confidence 56899999988 445544 2333333 899999999999999999999999874 4 677799999999
Q ss_pred h-hcCchHHHHHHHhccCCCCcccCCCCcHHHHHHhcCcHHHHHHHHHh
Q 044402 68 C-KNGHVKVMVEMLKKQHCPMFVTNSGYNILHFVVKNGHVNMVKAIIKI 115 (127)
Q Consensus 68 ~-~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 115 (127)
+ ..|+.+++++|++.|+ .+.||+++|+..|+.+++++|+++
T Consensus 206 a~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ 247 (376)
T 2aja_A 206 AVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIARH 247 (376)
T ss_dssp HSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHH
T ss_pred HHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHHhc
Confidence 9 9999999999999763 389999999999999999999988
No 113
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.80 E-value=2.8e-19 Score=117.16 Aligned_cols=99 Identities=13% Similarity=0.094 Sum_probs=88.7
Q ss_pred cccCCchhHHHHHhc-CCHHHHHHHHHhcCCCccccc--ccCCChhhhhhhcCchHHHHHHHhccCCCCcccCCCCcHHH
Q 044402 22 KDWNENIPLYFATSN-TYIRGVCFLLELNGHSAIEHN--IKTLYPIHLACKNGHVKVMVEMLKKQHCPMFVTNSGYNILH 98 (127)
Q Consensus 22 ~d~~g~t~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~--~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~ 98 (127)
.+..+.|+||.|+.. ++.+++++|++.|++++ ..+ ..|.||||+|+..|+.+++++|++.|++++..|..|+||||
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn-~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh 273 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVN-WVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLH 273 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTT-CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCC-ccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 334566899999999 99999999999999986 566 78999999999999999999999999999999999999999
Q ss_pred HHHhcCcHHHHHHHHHh-cccccc
Q 044402 99 FVVKNGHVNMVKAIIKI-SETNIS 121 (127)
Q Consensus 99 ~a~~~~~~~~~~~Ll~~-~~~~~~ 121 (127)
+|+..|+.+++++|+++ .+++..
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~~~~ 297 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADLGAR 297 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHcCcHHHHHHHHHCcCCCCCc
Confidence 99999999999999998 555443
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=2.1e-19 Score=99.34 Aligned_cols=78 Identities=18% Similarity=0.141 Sum_probs=72.4
Q ss_pred CCcchHHHHHHH---------hhhcCCCCccccCCchhHHHHHhcCCHHHHHHHHHhcCCCcccccccCCChhhhhhhcC
Q 044402 1 MGNTAFHESLFI---------INRVTKWKTKDWNENIPLYFATSNTYIRGVCFLLELNGHSAIEHNIKTLYPIHLACKNG 71 (127)
Q Consensus 1 ~g~~~lh~a~~~---------l~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 71 (127)
+|.||||.|+.. +..+++++.+|..|.||||+|+..++.+++++|++.|+++. ..+..|+|||++|+..|
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~ 101 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX-AQDKFGKTAFDISIDNG 101 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccccCCCcHHHHHHHcC
Confidence 477999999988 56788999999999999999999999999999999999986 78899999999999999
Q ss_pred chHHHHHH
Q 044402 72 HVKVMVEM 79 (127)
Q Consensus 72 ~~~~~~~l 79 (127)
+.+++++|
T Consensus 102 ~~~~~~~L 109 (110)
T 2zgd_A 102 NEDLAEIL 109 (110)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHh
Confidence 99999986
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=69.80 E-value=5.3 Score=17.07 Aligned_cols=19 Identities=16% Similarity=-0.045 Sum_probs=13.8
Q ss_pred hHHHHHhcCCHHHHHHHHH
Q 044402 29 PLYFATSNTYIRGVCFLLE 47 (127)
Q Consensus 29 ~l~~a~~~~~~~~~~~ll~ 47 (127)
-++.||..|+.+.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 3677888888888776643
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=41.18 E-value=84 Score=21.50 Aligned_cols=48 Identities=13% Similarity=0.037 Sum_probs=31.4
Q ss_pred HhcCCHHHHHHHHHhcCCCcc-------------cccccCCChhhhhhhcCchHHHHHHHh
Q 044402 34 TSNTYIRGVCFLLELNGHSAI-------------EHNIKTLYPIHLACKNGHVKVMVEMLK 81 (127)
Q Consensus 34 ~~~~~~~~~~~ll~~~~~~~~-------------~~~~~~~t~l~~a~~~~~~~~~~~l~~ 81 (127)
...|+...|+..+..|.++.. ....-|.|.+|+|+++.+.+++-.|+.
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 456677777777776665432 122346777788888877777777766
No 117
>4asn_A TUBR; transcription, tubulin, FTSZ, segregation, partition; 3.50A {Bacillus megaterium}
Probab=20.08 E-value=53 Score=16.64 Aligned_cols=17 Identities=12% Similarity=0.341 Sum_probs=10.2
Q ss_pred chHHHHHHHhccCCCCc
Q 044402 72 HVKVMVEMLKKQHCPMF 88 (127)
Q Consensus 72 ~~~~~~~l~~~~~~~~~ 88 (127)
+++++.||.++++++..
T Consensus 16 D~SIL~~L~~~~A~~~~ 32 (101)
T 4asn_A 16 DVSILGWLFQNEANAVF 32 (101)
T ss_dssp HHHHHHHHHHTTCCSGG
T ss_pred HHHHHHHHHhcCcccee
Confidence 34566666666666643
Done!