Query 044404
Match_columns 76
No_of_seqs 103 out of 141
Neff 3.4
Searched_HMMs 13730
Date Mon Mar 25 04:33:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044404.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044404hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g26a_ g.3.16.1 (A:) N-termin 37.3 8.2 0.0006 19.4 1.6 10 66-75 20-29 (31)
2 d2ox7a1 b.172.1.1 (A:3-145) Hy 25.0 6.8 0.0005 23.2 -0.1 11 10-20 2-12 (143)
3 d1vema1 b.3.1.1 (A:418-516) be 24.9 12 0.00087 21.5 1.0 13 8-20 24-36 (99)
4 d2p84a1 b.172.1.1 (A:3-135) Or 22.4 7.9 0.00058 23.6 -0.2 10 10-19 2-11 (133)
5 d3bmva2 b.3.1.1 (A:579-683) Cy 21.7 10 0.00074 21.9 0.2 13 8-20 27-39 (105)
6 d1kula_ b.3.1.1 (A:) Glucoamyl 19.7 17 0.0012 20.8 1.0 13 8-20 27-39 (108)
7 d1qhoa2 b.3.1.1 (A:577-686) Cy 18.7 18 0.0013 20.8 0.9 13 8-20 28-40 (110)
8 d1cyga2 b.3.1.1 (A:575-680) Cy 18.7 13 0.00093 21.4 0.2 13 8-20 27-39 (106)
9 d1ufia_ a.30.4.1 (A:) Dimerisa 16.1 12 0.00085 20.2 -0.4 8 8-15 2-9 (48)
10 d1btka_ b.55.1.1 (A:) Bruton's 16.0 15 0.0011 21.9 0.1 16 61-76 142-157 (169)
No 1
>d1g26a_ g.3.16.1 (A:) N-terminal domain of granulin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.28 E-value=8.2 Score=19.40 Aligned_cols=10 Identities=40% Similarity=1.202 Sum_probs=8.0
Q ss_pred CCceeEEeec
Q 044404 66 AKKKWFCCVF 75 (76)
Q Consensus 66 ~~kKwfCc~~ 75 (76)
++-+|+||-+
T Consensus 20 ~sGaWgCCPf 29 (31)
T d1g26a_ 20 PSGAWGCCPF 29 (31)
T ss_dssp TTSCEEEEEC
T ss_pred cCCceeeccC
Confidence 4679999965
No 2
>d2ox7a1 b.172.1.1 (A:3-145) Hypothetical protein EF1440 {Enterococcus faecalis [TaxId: 1351]}
Probab=25.04 E-value=6.8 Score=23.24 Aligned_cols=11 Identities=45% Similarity=1.205 Sum_probs=9.1
Q ss_pred CCCCCCCCCCC
Q 044404 10 LPKFGEWDVND 20 (76)
Q Consensus 10 vPkFG~WD~~~ 20 (76)
+|||-.||...
T Consensus 2 ipKFRaWdk~~ 12 (143)
T d2ox7a1 2 IPKFRAWDTYE 12 (143)
T ss_dssp CCCEEEEETTT
T ss_pred CcEEEEEECCC
Confidence 59999999653
No 3
>d1vema1 b.3.1.1 (A:418-516) beta-amylase {Bacillus cereus [TaxId: 1396]}
Probab=24.85 E-value=12 Score=21.48 Aligned_cols=13 Identities=23% Similarity=0.759 Sum_probs=10.4
Q ss_pred CCCCCCCCCCCCC
Q 044404 8 STLPKFGEWDVND 20 (76)
Q Consensus 8 ~~vPkFG~WD~~~ 20 (76)
...|.+|.||.+.
T Consensus 24 Gs~~eLG~W~~~k 36 (99)
T d1vema1 24 GNRAELGSWDTKQ 36 (99)
T ss_dssp ESSGGGTTTCSSS
T ss_pred eCcHHHCCCChhh
Confidence 3579999999765
No 4
>d2p84a1 b.172.1.1 (A:3-135) Orf041 product {Staphylococcus phage 37 [TaxId: 320840]}
Probab=22.38 E-value=7.9 Score=23.58 Aligned_cols=10 Identities=50% Similarity=1.012 Sum_probs=8.4
Q ss_pred CCCCCCCCCC
Q 044404 10 LPKFGEWDVN 19 (76)
Q Consensus 10 vPkFG~WD~~ 19 (76)
+|||-.||..
T Consensus 2 iPKFRaWDk~ 11 (133)
T d2p84a1 2 IPKFREFDRE 11 (133)
T ss_dssp CCCEEEECHH
T ss_pred CCeEEEEECC
Confidence 6999999964
No 5
>d3bmva2 b.3.1.1 (A:579-683) Cyclodextrin glycosyltransferase, C-terminal domain {Thermoanaerobacterium [TaxId: 28895]}
Probab=21.75 E-value=10 Score=21.93 Aligned_cols=13 Identities=23% Similarity=0.872 Sum_probs=10.1
Q ss_pred CCCCCCCCCCCCC
Q 044404 8 STLPKFGEWDVND 20 (76)
Q Consensus 8 ~~vPkFG~WD~~~ 20 (76)
...|.+|.||...
T Consensus 27 Gs~~~LG~W~~~~ 39 (105)
T d3bmva2 27 GNVAELGNWDTSK 39 (105)
T ss_dssp ESSGGGTTTCGGG
T ss_pred eCcHHHCCCCHHH
Confidence 3579999999653
No 6
>d1kula_ b.3.1.1 (A:) Glucoamylase, granular starch-binding domain {Aspergillus niger [TaxId: 5061]}
Probab=19.70 E-value=17 Score=20.78 Aligned_cols=13 Identities=23% Similarity=1.035 Sum_probs=10.3
Q ss_pred CCCCCCCCCCCCC
Q 044404 8 STLPKFGEWDVND 20 (76)
Q Consensus 8 ~~vPkFG~WD~~~ 20 (76)
...|.+|.||...
T Consensus 27 Gs~~~LG~W~~~~ 39 (108)
T d1kula_ 27 GSISQLGDWETSD 39 (108)
T ss_dssp CSSGGGTTTCTTT
T ss_pred eChHHhCCCCHHH
Confidence 4679999999764
No 7
>d1qhoa2 b.3.1.1 (A:577-686) Cyclodextrin glycosyltransferase, C-terminal domain {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]}
Probab=18.68 E-value=18 Score=20.84 Aligned_cols=13 Identities=23% Similarity=0.997 Sum_probs=10.3
Q ss_pred CCCCCCCCCCCCC
Q 044404 8 STLPKFGEWDVND 20 (76)
Q Consensus 8 ~~vPkFG~WD~~~ 20 (76)
...|.+|.||..+
T Consensus 28 G~~~~LG~W~~~~ 40 (110)
T d1qhoa2 28 GNIPELGNWSTDT 40 (110)
T ss_dssp ESSGGGTTTCCCC
T ss_pred eCcHHHCCCChhh
Confidence 3579999999864
No 8
>d1cyga2 b.3.1.1 (A:575-680) Cyclodextrin glycosyltransferase, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=18.65 E-value=13 Score=21.38 Aligned_cols=13 Identities=23% Similarity=0.785 Sum_probs=10.1
Q ss_pred CCCCCCCCCCCCC
Q 044404 8 STLPKFGEWDVND 20 (76)
Q Consensus 8 ~~vPkFG~WD~~~ 20 (76)
...|.+|.||.+.
T Consensus 27 Gs~~~LG~W~~~~ 39 (106)
T d1cyga2 27 GNVYELGNWDTSK 39 (106)
T ss_dssp ESSGGGBTTCGGG
T ss_pred cCHHHHCCCCHHH
Confidence 3579999999764
No 9
>d1ufia_ a.30.4.1 (A:) Dimerisation domain of CENP-B {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.08 E-value=12 Score=20.24 Aligned_cols=8 Identities=50% Similarity=1.057 Sum_probs=6.0
Q ss_pred CCCCCCCC
Q 044404 8 STLPKFGE 15 (76)
Q Consensus 8 ~~vPkFG~ 15 (76)
.+||-|||
T Consensus 2 ~pvpsfge 9 (48)
T d1ufia_ 2 MPVPSFGE 9 (48)
T ss_dssp CCCCCHHH
T ss_pred CCCccHHH
Confidence 47888886
No 10
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.96 E-value=15 Score=21.88 Aligned_cols=16 Identities=19% Similarity=0.665 Sum_probs=10.5
Q ss_pred CCCCCCCceeEEeecC
Q 044404 61 HKQYSAKKKWFCCVFS 76 (76)
Q Consensus 61 ~~~~~~~kKwfCc~~~ 76 (76)
++.--...+|-||.++
T Consensus 142 h~~~~~~~~w~c~~~~ 157 (169)
T d1btka_ 142 HPCFWIDGQYLCCSQT 157 (169)
T ss_dssp CSSCEETTEETTTCCC
T ss_pred CcccccCCEEcCCCCc
Confidence 3344456789999753
Done!