Your job contains 1 sequence.
>044408
WFSLTVDWISHMKLIKSGINNVASGILRTLMYAFRFGLAYLAMLPVMSFNIGVLLAAVAG
YSAGFFIFGSQVFRNNFKIEPYQDLSDLPPPNC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044408
(93 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2153306 - symbol:COPT1 "copper transporter 1" ... 199 6.0e-16 1
TAIR|locus:2102752 - symbol:COPT2 "copper transporter 2" ... 196 1.3e-15 1
TAIR|locus:504955951 - symbol:COPT6 "copper transporter 6... 187 1.1e-14 1
TAIR|locus:2153311 - symbol:COPT3 "copper transporter 3" ... 164 3.1e-12 1
TAIR|locus:504955905 - symbol:COPT4 "copper transporter 4... 144 4.1e-10 1
UNIPROTKB|Q60EN8 - symbol:COPT2 "Copper transporter 2" sp... 129 1.6e-08 1
UNIPROTKB|Q94EE4 - symbol:COPT1 "Copper transporter 1" sp... 124 5.3e-08 1
GENEDB_PFALCIPARUM|PF14_0369 - symbol:PF14_0369 "hypothet... 105 1.5e-05 1
UNIPROTKB|Q8IL79 - symbol:PF14_0369 "Copper transporter p... 105 1.5e-05 1
TAIR|locus:2180474 - symbol:COPT5 "copper transporter 5" ... 98 3.0e-05 1
DICTYBASE|DDB_G0285545 - symbol:DDB_G0285545 "Ctr copper ... 94 8.1e-05 1
WB|WBGene00010274 - symbol:F58G6.3 species:6239 "Caenorha... 86 0.00057 1
>TAIR|locus:2153306 [details] [associations]
symbol:COPT1 "copper transporter 1" species:3702
"Arabidopsis thaliana" [GO:0005375 "copper ion transmembrane
transporter activity" evidence=IEA;IGI;ISS] [GO:0006825 "copper ion
transport" evidence=IGI;ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0035434 "copper ion transmembrane transport"
evidence=IEA] [GO:0048235 "pollen sperm cell differentiation"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0016020 "membrane" evidence=ISS] InterPro:IPR007274
Pfam:PF04145 GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0016020 GO:GO:0048364 GO:GO:0048235 GO:GO:0005375 EMBL:Z49859
EMBL:AB024027 EMBL:AY091090 EMBL:AY123038 EMBL:AF466373
EMBL:AK226835 IPI:IPI00543228 PIR:T48875 RefSeq:NP_200711.1
UniGene:At.9700 STRING:Q39065 TCDB:1.A.56.1.1 PaxDb:Q39065
PRIDE:Q39065 EnsemblPlants:AT5G59030.1 GeneID:836020
KEGG:ath:AT5G59030 TAIR:At5g59030 eggNOG:NOG300540
HOGENOM:HOG000195393 InParanoid:Q39065 KO:K14686 OMA:TEWLAHS
PhylomeDB:Q39065 ProtClustDB:CLSN2685139 Genevestigator:Q39065
GermOnline:AT5G59030 PANTHER:PTHR12483 Uniprot:Q39065
Length = 170
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 39/96 (40%), Positives = 59/96 (61%)
Query: 1 WFSLTVDWISHMKLIKSGIN---NVASGILRTLMYAFRFGLAYLAMLPVMSFNIGVLLAA 57
+ ++ +W++H L++ N A+G+++T +Y R GLAYL ML VMSFN GV L A
Sbjct: 76 FLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVA 135
Query: 58 VAGYSAGFFIFGSQVFRNNFKIEPYQDLSDLPPPNC 93
+AG++ GF +FGSQ FRN + + +PP C
Sbjct: 136 LAGHAVGFMLFGSQTFRNT---SDDRKTNYVPPSGC 168
>TAIR|locus:2102752 [details] [associations]
symbol:COPT2 "copper transporter 2" species:3702
"Arabidopsis thaliana" [GO:0005375 "copper ion transmembrane
transporter activity" evidence=IEA;ISS] [GO:0006825 "copper ion
transport" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0035434 "copper ion transmembrane transport"
evidence=IEA] [GO:0015089 "high affinity copper ion transmembrane
transporter activity" evidence=IGI] [GO:0015678 "high-affinity
copper ion transport" evidence=IGI] [GO:0046658 "anchored to plasma
membrane" evidence=IDA] InterPro:IPR007274 Pfam:PF04145
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046658
EMBL:AL096859 HOGENOM:HOG000195393 ProtClustDB:CLSN2685139
PANTHER:PTHR12483 OMA:YALCLIV EMBL:AF466370 EMBL:BT009708
IPI:IPI00525977 PIR:T12958 RefSeq:NP_190274.1 UniGene:At.37005
STRING:Q9STG2 PaxDb:Q9STG2 PRIDE:Q9STG2 EnsemblPlants:AT3G46900.1
GeneID:823843 KEGG:ath:AT3G46900 TAIR:At3g46900 eggNOG:NOG279049
InParanoid:Q9STG2 PhylomeDB:Q9STG2 Genevestigator:Q9STG2
GO:GO:0015089 GO:GO:0015678 Uniprot:Q9STG2
Length = 158
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 38/91 (41%), Positives = 59/91 (64%)
Query: 3 SLTVDWISHMKLIK-SGINNVASGILRTLMYAFRFGLAYLAMLPVMSFNIGVLLAAVAGY 61
++ +W++H +++ SG N A+G+ +T +Y + GL+YL ML VMSFN GV + A+AGY
Sbjct: 66 AVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGY 125
Query: 62 SAGFFIFGSQVFRNNFKIEPYQDLSDLPPPN 92
GFF+FGS F+ K Q ++L PP+
Sbjct: 126 GVGFFLFGSTTFK---KPSDDQKTAELLPPS 153
>TAIR|locus:504955951 [details] [associations]
symbol:COPT6 "copper transporter 6" species:3702
"Arabidopsis thaliana" [GO:0005375 "copper ion transmembrane
transporter activity" evidence=IEA;ISS] [GO:0006825 "copper ion
transport" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0035434 "copper ion transmembrane transport"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA]
InterPro:IPR007274 Pfam:PF04145 GO:GO:0016021 GO:GO:0005773
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005623 GO:GO:0005375
HOGENOM:HOG000195393 ProtClustDB:CLSN2685139 PANTHER:PTHR12483
EMBL:AK118724 EMBL:BT004940 IPI:IPI00531722 RefSeq:NP_850091.1
UniGene:At.44738 IntAct:Q8GWP3 PaxDb:Q8GWP3 PRIDE:Q8GWP3
EnsemblPlants:AT2G26975.1 GeneID:817239 KEGG:ath:AT2G26975
TAIR:At2g26975 eggNOG:NOG270490 InParanoid:Q8GWP3 OMA:WLAHSSI
PhylomeDB:Q8GWP3 Genevestigator:Q8GWP3 Uniprot:Q8GWP3
Length = 145
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 35/85 (41%), Positives = 57/85 (67%)
Query: 3 SLTVDWISHMKLIKS-GINNVASGILRTLMYAFRFGLAYLAMLPVMSFNIGVLLAAVAGY 61
++ V+W++H +++ G + A G+++T +Y + GLAYL ML VMSFN GV + A+AG+
Sbjct: 61 AVIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGF 120
Query: 62 SAGFFIFGSQVFRNNFKIE-PYQDL 85
+ GF +FGS F+N E P++ L
Sbjct: 121 AVGFMLFGSTAFKNPSDDEKPFEQL 145
>TAIR|locus:2153311 [details] [associations]
symbol:COPT3 "copper transporter 3" species:3702
"Arabidopsis thaliana" [GO:0005375 "copper ion transmembrane
transporter activity" evidence=IEA;ISS] [GO:0006825 "copper ion
transport" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0035434 "copper ion transmembrane transport"
evidence=IEA] [GO:0015089 "high affinity copper ion transmembrane
transporter activity" evidence=IGI] InterPro:IPR007274 Pfam:PF04145
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB024027
HOGENOM:HOG000195393 PANTHER:PTHR12483 GO:GO:0015089 EMBL:DQ447093
EMBL:AY087351 EMBL:AF466371 IPI:IPI00528893 RefSeq:NP_200712.1
UniGene:At.37004 STRING:Q9FGU8 PRIDE:Q9FGU8
EnsemblPlants:AT5G59040.1 GeneID:836021 KEGG:ath:AT5G59040
TAIR:At5g59040 eggNOG:NOG312615 InParanoid:Q9FGU8 OMA:NSHTEVQ
PhylomeDB:Q9FGU8 ProtClustDB:CLSN2914852 Genevestigator:Q9FGU8
Uniprot:Q9FGU8
Length = 151
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 9 ISHMKLIKSGINNVASGILRTLMYAFRFGLAYLAMLPVMSFNIGVLLAAVAGYSAGFFIF 68
+S +KSG ++ G+L+T +Y R L+YL ML VMSFN GV +AA+AG+ GF IF
Sbjct: 72 LSRCGFMKSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIF 131
Query: 69 GSQVFR 74
GS+ FR
Sbjct: 132 GSRAFR 137
>TAIR|locus:504955905 [details] [associations]
symbol:COPT4 "copper transporter 4" species:3702
"Arabidopsis thaliana" [GO:0005375 "copper ion transmembrane
transporter activity" evidence=IEA;ISS] [GO:0006825 "copper ion
transport" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0035434 "copper ion transmembrane transport"
evidence=IEA] [GO:0015089 "high affinity copper ion transmembrane
transporter activity" evidence=IGI] InterPro:IPR007274 Pfam:PF04145
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR
HOGENOM:HOG000195393 PANTHER:PTHR12483 GO:GO:0015089 eggNOG:KOG3386
EMBL:AF466372 IPI:IPI00520705 RefSeq:NP_850289.1 UniGene:At.37003
PRIDE:Q8SAA5 EnsemblPlants:AT2G37925.1 GeneID:818369
KEGG:ath:AT2G37925 TAIR:At2g37925 InParanoid:Q8SAA5 OMA:AFFWGHR
PhylomeDB:Q8SAA5 Genevestigator:Q8SAA5 Uniprot:Q8SAA5
Length = 145
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 1 WFSLTVDWI---SHMKLIKSGINNVASGILRTLMYAFRFGLAYLAMLPVMSFNIGVLLAA 57
+ + +W+ S IK G + +A RT MY + G +YL +L V+SFN GV LAA
Sbjct: 64 FLAFLAEWLARCSDASSIKQGADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAA 123
Query: 58 VAGYSAGFFIFGSQVFRN 75
+ G++ GF +F + FRN
Sbjct: 124 IFGHALGFAVFRGRAFRN 141
>UNIPROTKB|Q60EN8 [details] [associations]
symbol:COPT2 "Copper transporter 2" species:39947 "Oryza
sativa Japonica Group" [GO:0005375 "copper ion transmembrane
transporter activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0006825
"copper ion transport" evidence=IMP] [GO:0043621 "protein
self-association" evidence=IDA] [GO:0051119 "sugar transmembrane
transporter activity" evidence=ISS] InterPro:IPR007274 Pfam:PF04145
GO:GO:0005887 GO:GO:0006952 GO:GO:0043621 EMBL:AP008211
GO:GO:0005375 PANTHER:PTHR12483 ProtClustDB:CLSN2691893
GO:GO:0051119 EMBL:AC109595 EMBL:AK107848 RefSeq:NP_001055594.1
UniGene:Os.31094 EnsemblPlants:LOC_Os05g35050.1 GeneID:4338846
KEGG:osa:4338846 Gramene:Q60EN8 eggNOG:KOG3386 Uniprot:Q60EN8
Length = 151
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 23 ASGILRTLMYAFRFGLAYLAMLPVMSFNIGVLLAAVAGYSAGFFIF 68
A+ LRT ++A R G+AYL ML +MSFN GV LA VAG++AGF F
Sbjct: 82 AAAALRTAVHAVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAF 127
>UNIPROTKB|Q94EE4 [details] [associations]
symbol:COPT1 "Copper transporter 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005375 "copper ion transmembrane
transporter activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0006825
"copper ion transport" evidence=IMP] [GO:0043621 "protein
self-association" evidence=IDA] [GO:0051119 "sugar transmembrane
transporter activity" evidence=ISS] InterPro:IPR007274 Pfam:PF04145
GO:GO:0005887 GO:GO:0006952 GO:GO:0043621 EMBL:AP008207
GO:GO:0005375 PANTHER:PTHR12483 EMBL:AP003106 RefSeq:NP_001044379.2
UniGene:Os.42024 EnsemblPlants:LOC_Os01g56420.1 GeneID:4324610
KEGG:dosa:Os01t0770700-00 KEGG:osa:4324610 Gramene:Q94EE4
eggNOG:NOG254440 OMA:YALCLIV ProtClustDB:CLSN2691893 GO:GO:0051119
Uniprot:Q94EE4
Length = 161
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 23 ASGILRTLMYAFRFGLAYLAMLPVMSFNIGVLLAAVAGYSAGFFIF 68
A G+ R ++ R G+AYL ML +MSFN GV L AVAG++AGF F
Sbjct: 94 AGGLARAAVHTVRVGVAYLLMLALMSFNGGVFLVAVAGHAAGFLAF 139
>GENEDB_PFALCIPARUM|PF14_0369 [details] [associations]
symbol:PF14_0369 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR007274 Pfam:PF04145 GO:GO:0016021
EMBL:AE014187 GO:GO:0005375 KO:K14686 PANTHER:PTHR12483
RefSeq:XP_001348543.1 ProteinModelPortal:Q8IL79 PRIDE:Q8IL79
EnsemblProtists:PF14_0369:mRNA GeneID:811951 KEGG:pfa:PF14_0369
EuPathDB:PlasmoDB:PF3D7_1439000 HOGENOM:HOG000282166
ProtClustDB:CLSZ2433244 Uniprot:Q8IL79
Length = 235
Score = 105 (42.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 28 RTLMYAFRFGLAYLAMLPVMSFNIGVLLAAVAGYSAGFFIFGSQVFRNNFKIEPYQDL 85
R L+ + YL ML VM+FN+G+ +A V G S GFFIFG++ F ++ K P DL
Sbjct: 165 RMLLSFVIYSWDYLLMLIVMTFNVGLFVAVVLGLSFGFFIFGNK-FVSSKKCSP-DDL 220
>UNIPROTKB|Q8IL79 [details] [associations]
symbol:PF14_0369 "Copper transporter putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR007274 Pfam:PF04145 GO:GO:0016021
EMBL:AE014187 GO:GO:0005375 KO:K14686 PANTHER:PTHR12483
RefSeq:XP_001348543.1 ProteinModelPortal:Q8IL79 PRIDE:Q8IL79
EnsemblProtists:PF14_0369:mRNA GeneID:811951 KEGG:pfa:PF14_0369
EuPathDB:PlasmoDB:PF3D7_1439000 HOGENOM:HOG000282166
ProtClustDB:CLSZ2433244 Uniprot:Q8IL79
Length = 235
Score = 105 (42.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 28 RTLMYAFRFGLAYLAMLPVMSFNIGVLLAAVAGYSAGFFIFGSQVFRNNFKIEPYQDL 85
R L+ + YL ML VM+FN+G+ +A V G S GFFIFG++ F ++ K P DL
Sbjct: 165 RMLLSFVIYSWDYLLMLIVMTFNVGLFVAVVLGLSFGFFIFGNK-FVSSKKCSP-DDL 220
>TAIR|locus:2180474 [details] [associations]
symbol:COPT5 "copper transporter 5" species:3702
"Arabidopsis thaliana" [GO:0005375 "copper ion transmembrane
transporter activity" evidence=IEA;ISS] [GO:0006825 "copper ion
transport" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0035434 "copper ion transmembrane transport"
evidence=IEA] [GO:0015089 "high affinity copper ion transmembrane
transporter activity" evidence=IGI] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
[GO:0005770 "late endosome" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0015680 "intracellular copper ion transport"
evidence=IMP] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR007274 Pfam:PF04145 GO:GO:0016021 GO:GO:0009506
GO:GO:0009737 GO:GO:0005794 GO:GO:0005774 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005770 GO:GO:0015680 EMBL:AF296832
HOGENOM:HOG000195393 KO:K14686 PANTHER:PTHR12483 GO:GO:0015089
EMBL:AY039578 EMBL:AY054124 EMBL:AY086915 EMBL:AF466374
IPI:IPI00521782 RefSeq:NP_197565.1 UniGene:At.24711
UniGene:At.72357 STRING:Q93VM8 PaxDb:Q93VM8 PRIDE:Q93VM8
EnsemblPlants:AT5G20650.1 GeneID:832188 KEGG:ath:AT5G20650
TAIR:At5g20650 eggNOG:NOG313752 InParanoid:Q93VM8 OMA:FSAFYQY
PhylomeDB:Q93VM8 ProtClustDB:CLSN2687384 Genevestigator:Q93VM8
Uniprot:Q93VM8
Length = 146
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 16 KSGINNVASGILRTLMYAFRFGLAYLAMLPVMSFNIGVLLAAVAGYSAGFFIFGS 70
KSG + A L++ + YL ML MSFN GV +A V G +AG+ +F S
Sbjct: 77 KSGTRSAAKAA-SVLLFGVNAAIGYLLMLAAMSFNGGVFIAIVVGLTAGYAVFRS 130
>DICTYBASE|DDB_G0285545 [details] [associations]
symbol:DDB_G0285545 "Ctr copper transporter family
protein" species:44689 "Dictyostelium discoideum" [GO:0035434
"copper ion transmembrane transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005375 "copper ion
transmembrane transporter activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR007274 Pfam:PF04145
dictyBase:DDB_G0285545 GO:GO:0016021 EMBL:AAFI02000079
GO:GO:0005375 KO:K14686 PANTHER:PTHR12483 eggNOG:NOG279049
RefSeq:XP_638116.1 EnsemblProtists:DDB0186559 GeneID:8625164
KEGG:ddi:DDB_G0285545 InParanoid:Q54N27 OMA:SHLWKTI
ProtClustDB:CLSZ2846711 Uniprot:Q54N27
Length = 146
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 24 SGILRTLMYAFRFGLAYLAMLPVMSFNIGVLLAAVAGYSAGFFIFGSQVFRNNFKI 79
S + +T+++ F + Y ML MSFN G+ ++ V G GF++FG + F + I
Sbjct: 85 SHLWKTIVHMIAFIVNYTIMLIFMSFNGGICISCVLGIGVGFYLFGQKRFSKSVAI 140
>WB|WBGene00010274 [details] [associations]
symbol:F58G6.3 species:6239 "Caenorhabditis elegans"
[GO:0005375 "copper ion transmembrane transporter activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0035434 "copper ion transmembrane transport" evidence=IEA]
InterPro:IPR007274 Pfam:PF04145 GO:GO:0016021 GO:GO:0005375
PANTHER:PTHR12483 GeneTree:ENSGT00540000072256 EMBL:Z68217
HOGENOM:HOG000267040 PIR:T22951 RefSeq:NP_501713.1
UniGene:Cel.28888 EnsemblMetazoa:F58G6.3 GeneID:259943
KEGG:cel:CELE_F58G6.3 UCSC:F58G6.3 CTD:259943 WormBase:F58G6.3
eggNOG:NOG307094 InParanoid:Q21009 OMA:GPFMWMW NextBio:952708
Uniprot:Q21009
Length = 134
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 28 RTLMYAFRFGLAYLAMLPVMSFNIGVLLAAVAGYSAGFFIFGSQ 71
+T ++ + G +Y ML M+F+I + LA V G S GF IFG +
Sbjct: 89 QTFLFFVQLGFSYCLMLIFMTFSIWLGLAVVIGLSIGFLIFGGR 132
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.329 0.143 0.452 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 93 93 0.00091 102 3 11 22 0.41 29
29 0.41 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 518 (55 KB)
Total size of DFA: 103 KB (2072 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.05u 0.12s 10.17t Elapsed: 00:00:00
Total cpu time: 10.05u 0.12s 10.17t Elapsed: 00:00:00
Start: Thu May 9 16:15:55 2013 End: Thu May 9 16:15:55 2013