BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044410
(402 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F)
pdb|3A5S|B Chain B, Benzalacetone Synthase (I207lL208F)
Length = 387
Score = 467 bits (1201), Expect = e-132, Method: Compositional matrix adjust.
Identities = 224/372 (60%), Positives = 272/372 (73%), Gaps = 1/372 (0%)
Query: 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
AT++AIGT+ PPNC+YQAD+PDFYFRVTNSDH LK+KFKR+CE I+KRY H+TEEI
Sbjct: 13 ATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEI 72
Query: 84 LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
LKENPN+ YEA SL+ R M + V +LGKEAALKAIKEWGQP SKITHLI GVD
Sbjct: 73 LKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVD 132
Query: 144 MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 203
MPGAD +L +LL L PSV R M Y GCY GGTV+RLAKDIAENN GARVL+VCS++
Sbjct: 133 MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTT 192
Query: 204 DFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYIS 263
F PSETHLD ++ QA+F E P+F+++S QT VP++ I
Sbjct: 193 CFRGPSETHLDSMIGQALF-GDGAAAVIVGADPDLTVERPIFELVSTAQTIVPESHGAIE 251
Query: 264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEK 323
G L E G HL + VP I N + CLS+A +P+ ISDWNSLF++ HPGG +LDQV
Sbjct: 252 GHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAILDQVTA 311
Query: 324 TLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGP 383
+GL KEKL +R VL++YGNM + +VFFI+DE+RKKS+E +ATTGEGLE GVLFGFGP
Sbjct: 312 KVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGP 371
Query: 384 GLTVETVVLQSV 395
G+TVETVVL+SV
Sbjct: 372 GITVETVVLRSV 383
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol
pdb|1CGK|A Chain A, Chalcone Synthase From Alfalfa Complexed With Naringenin
Length = 389
Score = 466 bits (1199), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/385 (58%), Positives = 283/385 (73%), Gaps = 2/385 (0%)
Query: 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
++ + +GP ATILAIGT+ P NC Q+ YPDFYF++TNS+HKTELKEKF+R+C++
Sbjct: 6 EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72 IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65 IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
THLI GVDMPGAD +L +LLGL+P V R M+Y QGC+ GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
RVLVVCS++ + F PS+THLD LV QA+F E P+F+++
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
QT PD+E I G L+E G HL +DVP + + K L A P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
PGG +LDQVE+ L L+ EK+ A+R VL EYGNM + V FILDE+RKKS + TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388
>pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum
pdb|3A5Q|B Chain B, Benzalacetone Synthase From Rheum Palmatum
pdb|3A5R|A Chain A, Benzalacetone Synthase From Rheum Palmatum Complexed With
4-Coumaroyl- Primed Monoketide Intermediate
pdb|3A5R|B Chain B, Benzalacetone Synthase From Rheum Palmatum Complexed With
4-Coumaroyl- Primed Monoketide Intermediate
Length = 387
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 223/372 (59%), Positives = 271/372 (72%), Gaps = 1/372 (0%)
Query: 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
AT++AIGT+ PPNC+YQAD+PDFYFRVTNSDH LK+KFKR+CE I+KRY H+TEEI
Sbjct: 13 ATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEI 72
Query: 84 LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
LKENPN+ YEA SL+ R M + V +LGKEAALKAIKEWGQP SKITHLI GVD
Sbjct: 73 LKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVD 132
Query: 144 MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 203
MPGAD +L +LL L PSV R M Y GCY GGTV+RLAKDIAENN GARVL+VCS++
Sbjct: 133 MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTT 192
Query: 204 DFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYIS 263
F PSETHLD ++ QA+ E P+F+++S QT VP++ I
Sbjct: 193 CFRGPSETHLDSMIGQAIL-GDGAAAVIVGADPDLTVERPIFELVSTAQTIVPESHGAIE 251
Query: 264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEK 323
G L E G HL + VP I N + CLS+A +P+ ISDWNSLF++ HPGG +LDQV
Sbjct: 252 GHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAILDQVTA 311
Query: 324 TLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGP 383
+GL KEKL +R VL++YGNM + +VFFI+DE+RKKS+E +ATTGEGLE GVLFGFGP
Sbjct: 312 KVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGP 371
Query: 384 GLTVETVVLQSV 395
G+TVETVVL+SV
Sbjct: 372 GITVETVVLRSV 383
>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa
pdb|1D6F|A Chain A, Chalcone Synthase C164a Mutant
Length = 389
Score = 462 bits (1190), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/385 (58%), Positives = 282/385 (73%), Gaps = 2/385 (0%)
Query: 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
++ + +GP ATILAIGT+ P NC Q+ YPDFYF++TNS+HKTELKEKF+R+C++
Sbjct: 6 EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72 IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65 IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
THLI GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
RVLVVCS++ + F PS+THLD LV QA+F E P+F+++
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
QT PD+E I G L+E G HL +DVP + + K L A P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
PGG +LDQVE+ L L+ EK+ A+R VL EYGNM + V FILDE+RKKS + TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388
>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa
pdb|1CHW|B Chain B, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa
Length = 389
Score = 462 bits (1189), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/385 (58%), Positives = 282/385 (73%), Gaps = 2/385 (0%)
Query: 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
++ + +GP ATILAIGT+ P NC Q+ YPDFYF++TNS+HKTELKEKF+R+C++
Sbjct: 6 EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72 IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65 IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
THLI GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGSFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
RVLVVCS++ + F PS+THLD LV QA+F E P+F+++
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
QT PD+E I G L+E G HL +DVP + + K L A P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
PGG +LDQVE+ L L+ EK+ A+R VL EYGNM + V FILDE+RKKS + TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388
>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A
Length = 388
Score = 462 bits (1189), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/385 (58%), Positives = 282/385 (73%), Gaps = 2/385 (0%)
Query: 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
++ + +GP ATILAIGT+ P NC Q+ YPDFYF++TNS+HKTELKEKF+R+C++
Sbjct: 5 EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 63
Query: 72 IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 64 IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 123
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
THLI GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 124 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 183
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
RVLVVCS++ + F PS+THLD LV QA+F E P+F+++
Sbjct: 184 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 242
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
QT PD+E I G L+E G HL +DVP + + K L A P+GISD+NS+F++ H
Sbjct: 243 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 302
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
PGG +LDQVE+ L L+ EK+ A+R VL EYGNM + V FILDE+RKKS + TTGE
Sbjct: 303 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 362
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 363 GLEWGVLFGFGPGLTIETVVLRSVA 387
>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa
Length = 389
Score = 462 bits (1189), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/385 (58%), Positives = 282/385 (73%), Gaps = 2/385 (0%)
Query: 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
++ + +GP ATILAIGT+ P NC Q+ YPDFYF++TNS+HKTELKEKF+R+C++
Sbjct: 6 EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72 IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65 IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
THLI GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
RVLVVCS++ + F PS+THLD LV QA+F E P+F+++
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
QT PD+E I G L+E G HL +DVP + + K L A P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
PGG +LDQVE+ L L+ EK+ A+R VL EYGNM + V FILDE+RKKS + TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388
>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida
pdb|1QLV|B Chain B, Pyrone Synthase (Pys) From Gerbera Hybrida
pdb|1EE0|A Chain A, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
pdb|1EE0|B Chain B, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
Length = 402
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/372 (59%), Positives = 278/372 (74%), Gaps = 1/372 (0%)
Query: 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
ATILAIGT+TPPNC QADY D+YFRVT S+H +LKEKFKRICE+ +IKKRY LTE+
Sbjct: 22 ATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKKRYLALTEDY 81
Query: 84 LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
L+ENP MC + APSL+ARQ +++ VP LGKEAA+KAI EWG P SKITHLIF GVD
Sbjct: 82 LQENPTMCEFMAPSLNARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVD 141
Query: 144 MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 203
MPGAD +L++LLGL PSV R M+Y QG GGTV+RLAKD+AENN G+RVL+VCS+I +
Sbjct: 142 MPGADYQLVKLLGLSPSVKRYMLYQQGXAAGGTVLRLAKDLAENNKGSRVLIVCSEITAI 201
Query: 204 DFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYIS 263
FH P+E HLD LV QA+F E P+F+I+S QT +PDTE +
Sbjct: 202 LFHGPNENHLDSLVAQALFGDGAAALIVGSGPHLAV-ERPIFEIVSTDQTILPDTEKAMK 260
Query: 264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEK 323
L+E G L RDVP+ + ++ A+SP+GI+DWNS+F++VHPGG +LDQVE+
Sbjct: 261 LHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVER 320
Query: 324 TLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGP 383
L L+++KL ASR+VL EYGN+ + V FI+DEVRK+S+ E K+TTGEGL+CGVLFGFGP
Sbjct: 321 KLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFGP 380
Query: 384 GLTVETVVLQSV 395
G+TVETVVL+SV
Sbjct: 381 GMTVETVVLRSV 392
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein
Length = 979
Score = 461 bits (1187), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/376 (59%), Positives = 281/376 (74%), Gaps = 2/376 (0%)
Query: 20 QGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL 79
+GP ATILAIGT+TP +C YQ+DY D+YF+VT S+H T LK+KF RIC++ IKKRY HL
Sbjct: 601 KGP-ATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHL 659
Query: 80 TEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139
TEE+L+E+PN+ Y APSL+ RQ ++ EVPKLGKEAALKA+KEWGQP SKITHL+F
Sbjct: 660 TEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTT 719
Query: 140 YGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
GV+MPGAD +L LLGL+PSV R+M+Y QGCY GGTV+R AKD+AENN GARVLVVCS+
Sbjct: 720 SGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSE 779
Query: 200 IRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTE 259
I V+ F PSE LD LV QA+F + E PLFQ++S QT +P++
Sbjct: 780 ITVVTFRGPSEDALDSLVGQALF-GDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSA 838
Query: 260 NYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLD 319
I+G L+E+G HL +VP I V+KCL+ A P+GISDWNSLF++ HPGG +LD
Sbjct: 839 GAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILD 898
Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
VE L L K+KL A+R+VL EYGNM + V FILDE+RKKS++ +ATTGEGL+ GVLF
Sbjct: 899 AVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLF 958
Query: 380 GFGPGLTVETVVLQSV 395
GFGPGLT+ETVVL S+
Sbjct: 959 GFGPGLTIETVVLHSI 974
>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant
Length = 389
Score = 460 bits (1183), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/385 (58%), Positives = 281/385 (72%), Gaps = 2/385 (0%)
Query: 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
++ + +GP ATILAIGT+ P NC Q+ YPDFYF++TNS+HKTELKEKF+R+C++
Sbjct: 6 EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72 IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65 IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
THLI GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
RVLVVCS++ + F PS+THLD LV QA+F E P+F+++
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
QT PD+E I L+E G HL +DVP + + K L A P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDAHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
PGG +LDQVE+ L L+ EK+ A+R VL EYGNM + V FILDE+RKKS + TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388
>pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa)
Length = 387
Score = 459 bits (1182), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/385 (58%), Positives = 281/385 (72%), Gaps = 2/385 (0%)
Query: 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
++ + +GP ATILAIGT+ P NC Q+ YPDFYF++TNS+HKTELKEKF+R+C++
Sbjct: 4 EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 62
Query: 72 IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 63 IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 122
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
THLI GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 123 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 182
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
RVLVVCS++ + F PS+THLD LV QA+F E P+F+++
Sbjct: 183 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 241
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
QT PD+E I G L+E G HL +DVP + + K L A P+GISD+NS+F++ H
Sbjct: 242 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 301
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
PGG +LDQVE+ L L+ EK+ A+R VL EYG M + V FILDE+RKKS + TTGE
Sbjct: 302 PGGPAILDQVEQKLALKPEKMNATREVLSEYGAMSSACVLFILDEMRKKSTQNGLKTTGE 361
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 362 GLEWGVLFGFGPGLTIETVVLRSVA 386
>pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant
Length = 389
Score = 459 bits (1182), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/385 (58%), Positives = 280/385 (72%), Gaps = 2/385 (0%)
Query: 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
++ + +GP ATILAIGT+ P NC Q+ YPDFYF++TNS+HKTELKEKF+R+C++
Sbjct: 6 EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72 IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65 IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
THLI GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
RVLVVCS++ + F PS+THLD LV QA E P+F+++
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQA-LSGDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
QT PD+E I G L+E G HL +DVP + + K L A P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
PGG +LDQVE+ L L+ EK+ A+R VL EYGNM + V FILDE+RKKS + TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388
>pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant)
pdb|1D6I|B Chain B, Chalcone Synthase (H303q Mutant)
Length = 388
Score = 459 bits (1182), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/385 (58%), Positives = 281/385 (72%), Gaps = 2/385 (0%)
Query: 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
++ + +GP ATILAIGT+ P NC Q+ YPDFYF++TNS+HKTELKEKF+R+C++
Sbjct: 5 EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 63
Query: 72 IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 64 IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 123
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
THLI GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 124 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 183
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
RVLVVCS++ + F PS+THLD LV QA+F E P+F+++
Sbjct: 184 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 242
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
QT PD+E I G L+E G HL +DVP + + K L A P+GISD+NS+F++
Sbjct: 243 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAQ 302
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
PGG +LDQVE+ L L+ EK+ A+R VL EYGNM + V FILDE+RKKS + TTGE
Sbjct: 303 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 362
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 363 GLEWGVLFGFGPGLTIETVVLRSVA 387
>pdb|1I8B|A Chain A, Chalcone Synthase (g256f)
pdb|1I8B|B Chain B, Chalcone Synthase (g256f)
Length = 389
Score = 459 bits (1180), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/385 (58%), Positives = 281/385 (72%), Gaps = 2/385 (0%)
Query: 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
++ + +GP ATILAIGT+ P NC Q+ YPDFYF++TNS+HKTELKEKF+R+C++
Sbjct: 6 EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72 IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65 IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
THLI GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
RVLVVCS++ + F PS+THLD LV QA+F E P+F+++
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
QT PD+E I L+E G HL +DVP + + K L A P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDFHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
PGG +LDQVE+ L L+ EK+ A+R VL EYGNM + V FILDE+RKKS + TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388
>pdb|1I88|A Chain A, Chalcone Synthase (G256v)
pdb|1I88|B Chain B, Chalcone Synthase (G256v)
Length = 389
Score = 458 bits (1179), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/385 (58%), Positives = 281/385 (72%), Gaps = 2/385 (0%)
Query: 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
++ + +GP ATILAIGT+ P NC Q+ YPDFYF++TNS+HKTELKEKF+R+C++
Sbjct: 6 EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72 IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65 IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
THLI GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
RVLVVCS++ + F PS+THLD LV QA+F E P+F+++
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
QT PD+E I L+E G HL +DVP + + K L A P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDVHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
PGG +LDQVE+ L L+ EK+ A+R VL EYGNM + V FILDE+RKKS + TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388
>pdb|1I89|A Chain A, Chalcone Synthase (G256l)
pdb|1I89|B Chain B, Chalcone Synthase (G256l)
Length = 389
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/385 (58%), Positives = 281/385 (72%), Gaps = 2/385 (0%)
Query: 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
++ + +GP ATILAIGT+ P NC Q+ YPDFYF++TNS+HKTELKEKF+R+C++
Sbjct: 6 EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72 IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65 IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
THLI GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
RVLVVCS++ + F PS+THLD LV QA+F E P+F+++
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
QT PD+E I L+E G HL +DVP + + K L A P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDLHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
PGG +LDQVE+ L L+ EK+ A+R VL EYGNM + V FILDE+RKKS + TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388
>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Of Specificity Of Type Iii Polyketide
Synthases: 18xchs Structure
pdb|1U0V|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Of Specificity Of Type Iii Polyketide
Synthases: 18xchs Structure
pdb|1U0W|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|C Chain C, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|D Chain D, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
Length = 393
Score = 453 bits (1165), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/385 (57%), Positives = 279/385 (72%), Gaps = 2/385 (0%)
Query: 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
++ + +GP ATILAIGT+ P NC Q+ YPDFYF++TNS+HKTELKEKF+R+C++
Sbjct: 10 EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 68
Query: 72 IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
IK+RY +LTEEILKENPN+C Y APSLDARQAML EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 69 IKRRYMYLTEEILKENPNVCEYMAPSLDARQAMLAMEVPRLGKEAAVKAIKEWGQPKSKI 128
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
THLI + D+PGAD +L +LLGL+P V R+ ++ GC+ GGTV+RLAKD+AENN GA
Sbjct: 129 THLIVCSTTTPDLPGADYQLTKLLGLRPYVKRVGVFQHGCFAGGTVLRLAKDLAENNKGA 188
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
RVLVVCS++ + F PS+THLD LV QA+F E P+F+++
Sbjct: 189 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 247
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
QT PD+E I G L+E G HL VP + + K L A P+GISD+NS+F++ H
Sbjct: 248 QTIAPDSEGAIDGHLREAGLTFHLKGAVPDIVSKNITKALVEAFEPLGISDYNSIFWIAH 307
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
PGG +LDQVE+ L L+ EK+ A+R VL EYGNM + V FILDE+RKKS + TTGE
Sbjct: 308 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 367
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 368 GLEWGVLFGFGPGLTIETVVLRSVA 392
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis
Hypogaea
pdb|1Z1F|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis
Hypogaea (Resveratrol-Bound Form)
Length = 390
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/381 (57%), Positives = 279/381 (73%), Gaps = 2/381 (0%)
Query: 16 VKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKR 75
V+ +GP AT+LAIGT+ PPNC Q+ Y D+YFRVTNS+H T+LK+KF+RICER IK R
Sbjct: 11 VQRAEGP-ATVLAIGTANPPNCVDQSTYADYYFRVTNSEHMTDLKKKFQRICERTQIKNR 69
Query: 76 YFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLI 135
+ +LTEEILKENPNMC Y+APSLDAR+ M+I EVP++GKEAA KAIKEWGQP+SKITHLI
Sbjct: 70 HMYLTEEILKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLI 129
Query: 136 FSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLV 195
F GV +PG D L+ LLGL PSV R M+Y QGC+ GGTV+RLAKD+AENN ARVL+
Sbjct: 130 FCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLI 189
Query: 196 VCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTV 255
VCS+ + F PSET +D LV QA+F E+PLF+I+S Q V
Sbjct: 190 VCSENTSVTFRGPSETDMDSLVGQALF-ADGAAAIIIGSDPVPEVENPLFEIVSTDQQLV 248
Query: 256 PDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGD 315
P++ I G L+E+G +L++ VP I ++ LS A P+GISD+NS+F++ HPGG
Sbjct: 249 PNSHGAIGGLLREVGLTFYLNKSVPDIISQNINDALSKAFDPLGISDYNSIFWIAHPGGR 308
Query: 316 GLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLEC 375
+LDQVE+ + L+ EK+ A+R VL YGNM + VFFI+D +RKKS+E TTGEGL+
Sbjct: 309 AILDQVEEKVNLKPEKMKATRDVLSNYGNMSSACVFFIMDLMRKKSLEAGLKTTGEGLDW 368
Query: 376 GVLFGFGPGLTVETVVLQSVS 396
GVLFGFGPGLT+ETVVL+S++
Sbjct: 369 GVLFGFGPGLTIETVVLRSMA 389
>pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|C Chain C, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|D Chain D, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|E Chain E, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|F Chain F, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
Length = 397
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/373 (55%), Positives = 262/373 (70%), Gaps = 2/373 (0%)
Query: 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
A+ILAIGT+ PPN Q+ YPDFYFR+T ++H TELK+KFKRICER +IK+RY +LTEEI
Sbjct: 23 ASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEI 82
Query: 84 LKENPNMCCY-EAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGV 142
LK+NP++C + E PSLDARQAML EVP+L KEAA KAI+EWGQ S ITHLIF +
Sbjct: 83 LKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTP 142
Query: 143 DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 202
D+PGAD + +LLGL PSV R+ ++ GC+ GGTV+R+AKD+AENN GARVLV+CS+
Sbjct: 143 DLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTA 202
Query: 203 LDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYI 262
+ F PSETHLD LV QA+F E F+I+ QT VP++E I
Sbjct: 203 VTFRGPSETHLDSLVGQALF-GDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAI 261
Query: 263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVE 322
G+++E+G L VP I ++ C+ A S ISDWN LF+VVHPGG +LD+VE
Sbjct: 262 GGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVE 321
Query: 323 KTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFG 382
L L KL +R+V+ EYGNM + V FILD+ RK S++ +TTGEGLE GVLFGFG
Sbjct: 322 AKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFG 381
Query: 383 PGLTVETVVLQSV 395
PGLT+ETVVL+SV
Sbjct: 382 PGLTIETVVLKSV 394
>pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|B Chain B, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|C Chain C, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|D Chain D, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XET|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|B Chain B, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|C Chain C, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|D Chain D, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
Length = 413
Score = 417 bits (1072), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/373 (55%), Positives = 262/373 (70%), Gaps = 2/373 (0%)
Query: 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
A+ILAIGT+ PPN Q+ YPDFYFR+T ++H TELK+KFKRICER +IK+RY +LTEEI
Sbjct: 39 ASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEI 98
Query: 84 LKENPNMCCY-EAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGV 142
LK+NP++C + E PSLDARQAML EVP+L KEAA KAI+EWGQ S ITHLIF +
Sbjct: 99 LKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTP 158
Query: 143 DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 202
D+PGAD + +LLGL PSV R+ ++ GC+ GGTV+R+AKD+AENN GARVLV+CS+
Sbjct: 159 DLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTA 218
Query: 203 LDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYI 262
+ F PSETHLD LV QA+F E F+I+ QT VP++E I
Sbjct: 219 VTFRGPSETHLDSLVGQALF-GDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAI 277
Query: 263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVE 322
G+++E+G L VP I ++ C+ A S ISDWN LF+VVHPGG +LD+VE
Sbjct: 278 GGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVE 337
Query: 323 KTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFG 382
L L KL +R+V+ EYGNM + V FILD+ RK S++ +TTGEGLE GVLFGFG
Sbjct: 338 AKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFG 397
Query: 383 PGLTVETVVLQSV 395
PGLT+ETVVL+SV
Sbjct: 398 PGLTIETVVLKSV 410
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide
Synthase 1 Complexed With Coa-Sh
pdb|3AWJ|B Chain B, Crystal Structure Of The Huperzia Serrata Polyketide
Synthase 1 Complexed With Coa-Sh
pdb|3AWK|A Chain A, Crystal Structure Of The Polyketide Synthase 1 From
Huperzia Serrata
Length = 402
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/376 (53%), Positives = 263/376 (69%), Gaps = 2/376 (0%)
Query: 21 GPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLT 80
GP ATILAIGTS P N F Q+ YPDF+F VTN + KTELK+KF+RIC++ IKKR+FHLT
Sbjct: 28 GP-ATILAIGTSNPTNIFEQSTYPDFFFDVTNCNDKTELKKKFQRICDKSGIKKRHFHLT 86
Query: 81 EEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFY 140
+EIL++NP++C ++ SLD RQ + + EVPKL KEAA+ AIK+WGQP SKITHL+F+
Sbjct: 87 DEILRKNPSICKFKEASLDPRQDIAVLEVPKLAKEAAISAIKQWGQPKSKITHLVFATTS 146
Query: 141 GVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI 200
GVDMPGAD +L +LLGL+P+V R+M+Y QG Y G TV+R+AKD+AENN GARVLV CS++
Sbjct: 147 GVDMPGADFQLAKLLGLRPTVKRVMLYQQGXYAGATVLRVAKDLAENNKGARVLVACSEV 206
Query: 201 RVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTEN 260
+ F PSETHLD LV A+F E PLF+I + +PD++
Sbjct: 207 TAVTFRAPSETHLDGLVGSALF-GDGAAALIVGSDPVPQEEKPLFEIHWAGEAVLPDSDG 265
Query: 261 YISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQ 320
I+G L+E G HL +DVP I +DK L+ + + +N +F+ VHPGG +LDQ
Sbjct: 266 AINGHLREAGLIFHLLKDVPGLISKNIDKVLAEPLEYVHFPSYNDMFWAVHPGGPAILDQ 325
Query: 321 VEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFG 380
+E LGL +K+ ASR VL YGNM + SV F+LD++RK S E TTGEG E G + G
Sbjct: 326 IEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIRKNSEELHLPTTGEGFEWGFVIG 385
Query: 381 FGPGLTVETVVLQSVS 396
FGPGLTVET++L+S++
Sbjct: 386 FGPGLTVETLLLRSIN 401
>pdb|3OV3|A Chain A, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|B Chain B, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|C Chain C, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|D Chain D, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
Length = 393
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/388 (48%), Positives = 268/388 (69%), Gaps = 2/388 (0%)
Query: 8 SRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRIC 67
+ L+ + + QGP ATI+AIGT+TPPN + Q+ +PDFYFRVTNSD K ELK+KF+R+C
Sbjct: 2 ANLHALRREQRAQGP-ATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMC 60
Query: 68 ERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQP 127
E+ +KKRY HLTEEILKE P +C Y+ S D RQ ++++E+P+L KEAA KAIKEWG+P
Sbjct: 61 EKTMVKKRYLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRP 120
Query: 128 VSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187
S+ITHL+F + G+DMPGAD RL LLGL +VNRLMIY+Q C+MG ++R+AKD+AEN
Sbjct: 121 KSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAEN 180
Query: 188 NPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQI 247
N GARVLVV +I VL F P+E + L QA F E P+++I
Sbjct: 181 NRGARVLVVACEITVLSFRGPNEGDFEALAFQAGF-GDGAGAVVVGADPLEGIEKPIYEI 239
Query: 248 LSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLF 307
+ Q TV +++ + G L+ G + +P I + + + L A++P+G+ +WN +F
Sbjct: 240 AAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVF 299
Query: 308 YVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKA 367
+V HPG ++D +E L L +KL +R+V EYGNM + +V+F++DE+RK+S E ++
Sbjct: 300 WVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRS 359
Query: 368 TTGEGLECGVLFGFGPGLTVETVVLQSV 395
TTG+GL+ GVL GFGPGL++ETVVL+S+
Sbjct: 360 TTGDGLQWGVLLGFGPGLSIETVVLRSM 387
>pdb|3OV2|A Chain A, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|B Chain B, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|C Chain C, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|D Chain D, Curcumin Synthase 1 From Curcuma Longa
Length = 393
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/388 (48%), Positives = 268/388 (69%), Gaps = 2/388 (0%)
Query: 8 SRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRIC 67
+ L+ + + QGP ATI+AIGT+TPPN + Q+ +PDFYFRVTNSD K ELK+KF+R+C
Sbjct: 2 ANLHALRREQRAQGP-ATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMC 60
Query: 68 ERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQP 127
E+ +KKRY HLTEEILKE P +C Y+ S D RQ ++++E+P+L KEAA KAIKEWG+P
Sbjct: 61 EKTMVKKRYLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRP 120
Query: 128 VSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187
S+ITHL+F + G+DMPGAD RL LLGL +VNRLMIY+Q C+MG ++R+AKD+AEN
Sbjct: 121 KSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAEN 180
Query: 188 NPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQI 247
N GARVLVV +I VL F P+E + L QA F E P+++I
Sbjct: 181 NRGARVLVVACEITVLSFRGPNEGDFEALAGQAGF-GDGAGAVVVGADPLEGIEKPIYEI 239
Query: 248 LSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLF 307
+ Q TV +++ + G L+ G + +P I + + + L A++P+G+ +WN +F
Sbjct: 240 AAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVF 299
Query: 308 YVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKA 367
+V HPG ++D +E L L +KL +R+V EYGNM + +V+F++DE+RK+S E ++
Sbjct: 300 WVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRS 359
Query: 368 TTGEGLECGVLFGFGPGLTVETVVLQSV 395
TTG+GL+ GVL GFGPGL++ETVVL+S+
Sbjct: 360 TTGDGLQWGVLLGFGPGLSIETVVLRSM 387
>pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant)
pdb|2D51|B Chain B, Pentaketide Chromone Synthase (M207g Mutant)
pdb|2D52|A Chain A, Pentaketide Chromone Synthase (M207g Mutant Complexed With
Coa)
pdb|2D52|B Chain B, Pentaketide Chromone Synthase (M207g Mutant Complexed With
Coa)
Length = 406
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/376 (50%), Positives = 253/376 (67%), Gaps = 4/376 (1%)
Query: 23 TATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEE 82
TAT++AIGT+ PP+ F Q Y D YFR TNS+HK ELK+KF IC++ I KRYF+ EE
Sbjct: 29 TATVMAIGTAHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGKRYFNYDEE 88
Query: 83 ILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGV 142
LK+ PN+ Y+ PSL+ RQ + + VP LG EAA+KAI+EWG+P S+ITHL+F GV
Sbjct: 89 FLKKYPNITSYDEPSLNDRQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGV 148
Query: 143 DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 202
DMP AD + +LLGL +VN+ IY QG Y GGTV+R AKD+AENN GARVLVVC+++ +
Sbjct: 149 DMPSADFQCAKLLGLHANVNKYCIYMQGXYAGGTVMRYAKDLAENNRGARVLVVCAELTI 208
Query: 203 LDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYI 262
+ P+ETHLD + ++F E P+F+I+ QT +P+TE+ I
Sbjct: 209 MGLRAPNETHLDNAIGISLF-GDGAAALIIGSDPIIGVEKPMFEIVCTKQTVIPNTEDVI 267
Query: 263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGIS---DWNSLFYVVHPGGDGLLD 319
L+E G +LS+ P+ I N V+ CL + +GI+ DWNSLF++ HPGG +LD
Sbjct: 268 HLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPPEDWNSLFWIPHPGGRAILD 327
Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
QVE L LR EK A+R VL +YGNM + SV +ILDE+R+KS + T GEGLE GVL
Sbjct: 328 QVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKGLETYGEGLEWGVLL 387
Query: 380 GFGPGLTVETVVLQSV 395
GFGPG+TVET++L S+
Sbjct: 388 GFGPGITVETILLHSL 403
>pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha
Stilbenecarboxylate Synthase 2 (Stcs2)
pdb|2P0U|B Chain B, Crystal Structure Of Marchantia Polymorpha
Stilbenecarboxylate Synthase 2 (Stcs2)
Length = 413
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/390 (47%), Positives = 257/390 (65%), Gaps = 7/390 (1%)
Query: 6 SNSRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKR 65
S SRL + GP AT+LA+G + P N F QA YPDF+F +TNS+ K LK KF+R
Sbjct: 23 SRSRL-----IAQAVGP-ATVLAMGKAVPANVFEQATYPDFFFNITNSNDKPALKAKFQR 76
Query: 66 ICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWG 125
IC++ IKKR+F+L ++IL+ NP MC Y SL+ RQ + + +VPKL KEA++ AIKEWG
Sbjct: 77 ICDKSGIKKRHFYLDQKILESNPAMCTYMETSLNCRQEIAVAQVPKLAKEASMNAIKEWG 136
Query: 126 QPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185
+P S+ITH++ + GV+MPGA++ +LLGL+P+V R+M+Y QG + G TV+R+AKD+A
Sbjct: 137 RPKSEITHIVMATTSGVNMPGAELATAKLLGLRPNVRRVMMYQQGXFAGATVLRVAKDLA 196
Query: 186 ENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLF 245
ENN GARVL +CS++ + F PSETH+D LV A+F E P++
Sbjct: 197 ENNAGARVLAICSEVTAVTFRAPSETHIDGLVGSALF-GDGAAAVIVGSDPRPGIERPIY 255
Query: 246 QILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNS 305
++ + +P+++ I G L E G HL +DVP I + L + + +G S WN
Sbjct: 256 EMHWAGEMVLPESDGAIDGHLTEAGLVFHLLKDVPGLITKNIGGFLKDTKNLVGASSWNE 315
Query: 306 LFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEM 365
LF+ VHPGG +LDQVE L L K K ASR +L +YGNM + SV F+LD VR++S+E
Sbjct: 316 LFWAVHPGGPAILDQVEAKLELEKGKFQASRDILSDYGNMSSASVLFVLDRVRERSLESN 375
Query: 366 KATTGEGLECGVLFGFGPGLTVETVVLQSV 395
K+T GEG E G L GFGPGLTVET++L+++
Sbjct: 376 KSTFGEGSEWGFLIGFGPGLTVETLLLRAL 405
>pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A
pdb|2D3M|B Chain B, Pentaketide Chromone Synthase Complexed With Coenzyme A
Length = 406
Score = 377 bits (967), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/376 (50%), Positives = 253/376 (67%), Gaps = 4/376 (1%)
Query: 23 TATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEE 82
TAT++AIGT+ PP+ F Q Y D YFR TNS+HK ELK+KF IC++ I KRYF+ EE
Sbjct: 29 TATVMAIGTAHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGKRYFNYDEE 88
Query: 83 ILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGV 142
LK+ PN+ Y+ PSL+ RQ + + VP LG EAA+KAI+EWG+P S+ITHL+F GV
Sbjct: 89 FLKKYPNITSYDEPSLNDRQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGV 148
Query: 143 DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 202
DMP AD + +LLGL +VN+ IY QG Y GGTV+R AKD+AENN GARVLVVC+++ +
Sbjct: 149 DMPSADFQCAKLLGLHANVNKYCIYMQGXYAGGTVMRYAKDLAENNRGARVLVVCAELTI 208
Query: 203 LDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYI 262
+ P+ETHLD + ++F E P+F+I+ QT +P+TE+ I
Sbjct: 209 MMLRAPNETHLDNAIGISLF-GDGAAALIIGSDPIIGVEKPMFEIVCTKQTVIPNTEDVI 267
Query: 263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGIS---DWNSLFYVVHPGGDGLLD 319
L+E G +LS+ P+ I N V+ CL + +GI+ DWNSLF++ HPGG +LD
Sbjct: 268 HLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPPEDWNSLFWIPHPGGRAILD 327
Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
QVE L LR EK A+R VL +YGNM + SV +ILDE+R+KS + T GEGLE GVL
Sbjct: 328 QVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKGLETYGEGLEWGVLL 387
Query: 380 GFGPGLTVETVVLQSV 395
GFGPG+TVET++L S+
Sbjct: 388 GFGPGITVETILLHSL 403
>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|B Chain B, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|C Chain C, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|D Chain D, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
Length = 416
Score = 324 bits (830), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 175/396 (44%), Positives = 243/396 (61%), Gaps = 10/396 (2%)
Query: 7 NSRLYDMTTVKSNQGPT--ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFK 64
S LY + ++ +Q A +LAIGT+ PPNC Q + PDFYFRVTNSDH T LK+KFK
Sbjct: 22 GSALYPLGEMRRSQRADGLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFK 81
Query: 65 RICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEW 124
RIC+ +++RY H TEE+L +P +APSLDAR + D VP+L EAA KAI EW
Sbjct: 82 RICQEMGVQRRYLHHTEEMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEW 141
Query: 125 GQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184
G+P + ITHL+ + G +PG D RL+ LLGL+PSV R M++ GC+ G +RLAKD+
Sbjct: 142 GRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDL 201
Query: 185 AENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPL 244
AEN+ GARVLVV +++ ++ F P E L+VQ +F + E PL
Sbjct: 202 AENSRGARVLVVAAELTLMYFTGPDEGCFRTLLVQGLF--GDGAAAVIVGADADDVERPL 259
Query: 245 FQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSN----AMSPIGI 300
F+I+S QT +P++++ ++ + E L R VP IG+ V++CL + + G
Sbjct: 260 FEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGG 319
Query: 301 SDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKK 360
WN LF+ VHPG ++DQV+ LGL KL ASR VL +YGNM +V F LDE+R++
Sbjct: 320 GGWNDLFWAVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQ 379
Query: 361 SIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS 396
E A GE E GV+ FGPG+TV+ ++L + S
Sbjct: 380 RKE--AAAAGEWPELGVMMAFGPGMTVDAMLLHATS 413
>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza
Sativa
pdb|3OIT|B Chain B, Crystal Structure Of Curcuminoid Synthase Cus From Oryza
Sativa
Length = 387
Score = 322 bits (826), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/377 (45%), Positives = 235/377 (62%), Gaps = 8/377 (2%)
Query: 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
A +LAIGT+ PPNC Q + PDFYFRVTNSDH T LK+KFKRIC+ +++RY H TEE+
Sbjct: 11 AAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEM 70
Query: 84 LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
L +P +APSLDAR + D VP+L EAA KAI EWG+P + ITHL+ + G
Sbjct: 71 LSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH 130
Query: 144 MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 203
+PG D RL+ LLGL+PSV R M++ GC+ G +RLAKD+AEN+ GARVLVV +++ ++
Sbjct: 131 VPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLM 190
Query: 204 DFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYIS 263
F P E L+VQ +F + E PLF+I+S QT +P++++ ++
Sbjct: 191 YFTGPDEGCFRTLLVQGLF--GDGAAAVIVGADADDVERPLFEIVSAAQTIIPESDHALN 248
Query: 264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSN----AMSPIGISDWNSLFYVVHPGGDGLLD 319
+ E L R VP IG+ V++CL + + G WN LF+ VHPG ++D
Sbjct: 249 MRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTIMD 308
Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
QV+ LGL KL ASR VL +YGNM +V F LDE+R++ E A GE E GV+
Sbjct: 309 QVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKE--AAAAGEWPELGVMM 366
Query: 380 GFGPGLTVETVVLQSVS 396
FGPG+TV+ ++L + S
Sbjct: 367 AFGPGMTVDAMLLHATS 383
>pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide
Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks
Hybrid From Dictyostelium)
pdb|2H84|B Chain B, Crystal Structure Of The C-terminal Type Iii Polyketide
Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks
Hybrid From Dictyostelium)
Length = 374
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 179/387 (46%), Gaps = 30/387 (7%)
Query: 17 KSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNS-DHKTELKEKFKRICERQSIKKR 75
KSN + +L IG S P Q D ++N K E EK KRI E+ IK R
Sbjct: 9 KSNN--NSFVLGIGISVPGEPISQQSLKD---SISNDFSDKAETNEKVKRIFEQSQIKTR 63
Query: 76 YFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLI 135
HL + K ++ ++ VP L ++A L+A+K+WG ITH++
Sbjct: 64 --HLVRDYTKPENSIKFRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIV 121
Query: 136 FSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLV 195
G+ +P + +L+ LLGL V R+ + GC G + +R A +A+ +P R+LV
Sbjct: 122 SVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILV 181
Query: 196 VCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTV 255
VC+++ L F D +V ++F E+PL++++ +
Sbjct: 182 VCTEVCSLHFSNTDGG--DQMVASSIFADGSAAYIIGCNPRI--EETPLYEVMCSINRSF 237
Query: 256 PDTENYISGQLKEMGTYCHLSRDVPVAIGN----YVDKCLSNA--MSPIGISDWNSLFYV 309
P+TEN + L++ G L +P+ IG+ +VD L A + IS + F +
Sbjct: 238 PNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEF-L 296
Query: 310 VHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK-KSIEEMKAT 368
+H GG +L +E +LG+ ++ + V YGNM + SV F++D RK KS+
Sbjct: 297 IHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKSLPTYS-- 354
Query: 369 TGEGLECGVLFGFGPGLTVETVVLQSV 395
+ FGPGL E L++V
Sbjct: 355 --------ISLAFGPGLAFEGCFLKNV 373
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|B Chain B, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|C Chain C, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|D Chain D, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
Length = 393
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 160/366 (43%), Gaps = 13/366 (3%)
Query: 23 TATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEE 82
A I + T TP Q+D D RV +E+ R+ ++ I R + +
Sbjct: 32 VAVIEGLATGTPRRVVNQSDAAD---RVAELFLDPGQRERIPRVYQKSRITTR--RMAVD 86
Query: 83 ILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGV 142
L ++ E ++ R + + L + + +A+ ++I L+ + G
Sbjct: 87 PLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGF 146
Query: 143 DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 202
PG DV +++ LGL PS++R+++ GC + A + +P + LVVC I +
Sbjct: 147 IAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVC--IEL 204
Query: 203 LDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYI 262
+ ++ +V+ ++F E + S + +TE+ I
Sbjct: 205 FSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGI 264
Query: 263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVE 322
+ G C LS ++P I + V ++ + G+ + + +HPGG +++Q
Sbjct: 265 VLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSV 324
Query: 323 KTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFG 382
++LG+ E S VL +GNM + S+ F+L+ + + +A + + + GV F FG
Sbjct: 325 RSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQ------QAESAKAISTGVAFAFG 378
Query: 383 PGLTVE 388
PG+TVE
Sbjct: 379 PGVTVE 384
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|B Chain B, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|C Chain C, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|D Chain D, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
Length = 393
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 160/366 (43%), Gaps = 13/366 (3%)
Query: 23 TATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEE 82
A I + T TP Q+D D RV +E+ R+ ++ I R + +
Sbjct: 32 VAVIEGLATGTPRRVVNQSDAAD---RVAELFLDPGQRERIPRVYQKSRITTR--RMAVD 86
Query: 83 ILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGV 142
L ++ E ++ R + + L + + +A+ ++I L+ + G
Sbjct: 87 PLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGF 146
Query: 143 DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 202
PG DV +++ LGL PS++R+++ GC + A + +P + LVVC I +
Sbjct: 147 IAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVC--IEL 204
Query: 203 LDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYI 262
+ ++ +V+ ++F E + S + +TE+ I
Sbjct: 205 CSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGI 264
Query: 263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVE 322
+ G C LS ++P I + V ++ + G+ + + +HPGG +++Q
Sbjct: 265 VLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSV 324
Query: 323 KTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFG 382
++LG+ E S VL +GNM + S+ F+L+ + + +A + + + GV F FG
Sbjct: 325 RSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQ------QAESAKAISTGVAFAFG 378
Query: 383 PGLTVE 388
PG+TVE
Sbjct: 379 PGVTVE 384
>pdb|3E1H|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase
Pksiiinc From Neurospora Crassa
pdb|3E1H|B Chain B, Crystal Structure Of A Type Iii Polyketide Synthase
Pksiiinc From Neurospora Crassa
Length = 465
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 149/340 (43%), Gaps = 27/340 (7%)
Query: 75 RYFHLTEEILKENPNMCCYEAPS----LDARQAMLIDEVPKLGKEAALKAIKEWGQPVSK 130
RY + + NP+ P+ + + + D VP L EA+ KA+ E ++
Sbjct: 73 RYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFMSDGVP-LAVEASRKAMAEARLVPAQ 131
Query: 131 ITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI-----A 185
ITH++ + PG D + + LGL + +++++ GC G +R A ++ A
Sbjct: 132 ITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTA 191
Query: 186 ENNPGARVLVVCSDIRVLDFHEPSETHLDVL----VVQAVFXXXXXXXXXXXXXXXXNHE 241
P AR+LV+ ++ E+ +D L + A+F +
Sbjct: 192 RGKP-ARILVLALEVSTTMVRSELES-IDALQETRIGIALFSDCASAVILSNGIGEAPGK 249
Query: 242 SPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMS----- 296
++ +L +PD+E+ + + MG LS VPV + ++ +S
Sbjct: 250 PAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQ 309
Query: 297 -PIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWAS--RYVLREYGNMGAPSVFFI 353
P + +HPGG +L E +GL E + AS RY+ +GN + ++F +
Sbjct: 310 LPSSYQKPADFDWAMHPGGATILSGAESAMGLTPEHMRASYDRYI--NHGNSSSATIFSV 367
Query: 354 LDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQ 393
L+ +R+K ++ + A G+ E V FGPG+ VE +L+
Sbjct: 368 LNRLREKDMDAL-APGGKVKEYVVGCAFGPGINVEMCMLK 406
>pdb|3EUQ|A Chain A, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|B Chain B, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|C Chain C, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|D Chain D, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
Length = 379
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 149/340 (43%), Gaps = 27/340 (7%)
Query: 75 RYFHLTEEILKENPNMCCYEAPS----LDARQAMLIDEVPKLGKEAALKAIKEWGQPVSK 130
RY + + NP+ P+ + + + D VP L EA+ KA+ E ++
Sbjct: 44 RYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFMSDGVP-LAVEASRKAMAEARLVPAQ 102
Query: 131 ITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI-----A 185
ITH++ + PG D + + LGL + +++++ G G +R A ++ A
Sbjct: 103 ITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGXSGGLAALRTAANLCLGHTA 162
Query: 186 ENNPGARVLVVCSDIRVLDFHEPSETHLDVL----VVQAVFXXXXXXXXXXXXXXXXNHE 241
P AR+LV+ ++ E+ +D L + A+F +
Sbjct: 163 RGKP-ARILVLALEVSTTMVRSELES-IDALQETRIGIALFSDCASAVILSNGIGEAPGK 220
Query: 242 SPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMS----- 296
++ +L +PD+E+ + G + MG LS VPV + ++ +S
Sbjct: 221 PAIYDLLGWENRVIPDSEHDLGGDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQ 280
Query: 297 -PIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWAS--RYVLREYGNMGAPSVFFI 353
P + +HPGG +L E +GL E + AS RY+ +GN + ++F +
Sbjct: 281 LPSSYQKPADFDWAMHPGGATILSGAESAMGLTPEHMRASYDRYI--NHGNSSSATIFSV 338
Query: 354 LDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQ 393
L+ +R+K ++ + A G+ E V FGPG+ VE +L+
Sbjct: 339 LNRLREKDMDAL-APGGKVKEYVVGCAFGPGINVEMCMLK 377
>pdb|3EUO|A Chain A, Crystal Structure Of A Fungal Type Iii Polyketide
Synthase, Oras
pdb|3EUO|B Chain B, Crystal Structure Of A Fungal Type Iii Polyketide
Synthase, Oras
pdb|3EUT|A Chain A, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|B Chain B, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|C Chain C, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|D Chain D, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
Length = 379
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 138/309 (44%), Gaps = 23/309 (7%)
Query: 102 QAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSV 161
+ + D VP L EA+ KA+ E ++ITH++ + PG D + + LGL +
Sbjct: 75 EVFMSDGVP-LAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRL 133
Query: 162 NRLMIYTQGCYMGGTVIRLAKDI-----AENNPGARVLVVCSDIRVLDFHEPSETHLDVL 216
+++++ G G +R A ++ A P AR+LV+ ++ E+ +D L
Sbjct: 134 EKVLLHGIGXSGGLAALRTAANLCLGHTARGKP-ARILVLALEVSTTMVRSELES-IDAL 191
Query: 217 ----VVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYISGQLKEMGTY 272
+ A+F + ++ +L +PD+E+ + + MG
Sbjct: 192 QETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWK 251
Query: 273 CHLSRDVPVAIGNYVDKCLSNAMS------PIGISDWNSLFYVVHPGGDGLLDQVEKTLG 326
LS VPV + ++ +S P + +HPGG +L E +G
Sbjct: 252 VVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWAMHPGGATILSGAESAMG 311
Query: 327 LRKEKLWAS--RYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPG 384
L E + AS RY+ +GN + ++F +L+ +R+K ++ + A G+ E V FGPG
Sbjct: 312 LTPEHMRASYDRYI--NHGNSSSATIFSVLNRLREKDMDAL-APGGKVKEYVVGCAFGPG 368
Query: 385 LTVETVVLQ 393
+ VE +L+
Sbjct: 369 INVEMCMLK 377
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Synthase (Thns) From Streptomyces Coelicolor A3(2): A
Bacterial Type Iii Polyketide Synthase (Pks) Provides
Insights Into Enzymatic Control Of Reactive Polyketide
Intermediates
pdb|1U0M|B Chain B, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Synthase (Thns) From Streptomyces Coelicolor A3(2): A
Bacterial Type Iii Polyketide Synthase (Pks) Provides
Insights Into Enzymatic Control Of Reactive Polyketide
Intermediates
Length = 382
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 131/328 (39%), Gaps = 31/328 (9%)
Query: 65 RICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEW 124
R+ E ++ R H+ + I E P + R + E +A+ +
Sbjct: 48 RLIENTGVRTR--HIVQPIED------TLEHPGFEDRNKVYEREAKSRVPAVIQRALDDA 99
Query: 125 GQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184
+ I +I+ + G MP L+ +G + ++ I GC GG I A D
Sbjct: 100 ELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDF 159
Query: 185 AENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPL 244
P A L+V + L + +P++ + L+ +F
Sbjct: 160 CTAYPEANALIVACEFCSLCY-QPTDLGVGSLLCNGLFGDGIAAAVVR------GRGGTG 212
Query: 245 FQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPI-GISDW 303
++ +P TE++I +K G + L + VP + + L+ A+ + G W
Sbjct: 213 VRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATM-----EPLAPALKELAGEHGW 267
Query: 304 NSL---FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKK 360
++ FY+VH GG +LD + L + SR L EYGN+ + +LD +R+
Sbjct: 268 DASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASA---VVLDALRRL 324
Query: 361 SIEEMKATTGEGLECGVLFGFGPGLTVE 388
E EG G+L GFGPG+T E
Sbjct: 325 FDE---GGVEEGAR-GLLAGFGPGITAE 348
>pdb|3V7I|A Chain A, Germicidin Synthase (Gcs) From Streptomyces Coelicolor, A
Type Iii Polyketide Synthase
Length = 413
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 117/294 (39%), Gaps = 24/294 (8%)
Query: 101 RQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS 160
R A + V G+ AA A++ G V+ + LI S +PG DV L L L+
Sbjct: 129 RTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGD 188
Query: 161 VNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQA 220
L C G + LA D+ +P VLVV S+ + ++P++ L+ L+V+
Sbjct: 189 TMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEA-LSTTYQPADDTLESLIVRL 247
Query: 221 VFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVP 280
+F + + ++ + T+P T + + + GT+ + R P
Sbjct: 248 LFADTAVAAVVTGRPRPES----VLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGP 303
Query: 281 VAIGNYVDKCLS--NAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWAS--- 335
A+ V S W+ + HPGG +L+ +E+T+ W S
Sbjct: 304 RAVQETVTAMWEWLRVRYEDDPSSWHPDVLLAHPGGTRVLEYMEQTM----PDEWPSGLL 359
Query: 336 RYVLREY--GNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTV 387
Y Y GN G +VF IL + + TG VL+ PGLT
Sbjct: 360 SYSRDSYTSGNRGGAAVFDIL-----RRAHDAGQKTG---SRAVLYAAAPGLTA 405
>pdb|3SQZ|A Chain A, Crystal Structure Of Hmg_coa Synthase Complexed With Coa
Length = 389
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 130 KITHLIFSAFYGVDMPGAD-VRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN 188
KI +I + VD A V + LLG++P + CY + AK E +
Sbjct: 70 KIDMVILATESSVDQSKAGAVYVHSLLGIQPFARSFEMKEAXCYSATAALNYAKLHVEKH 129
Query: 189 PGARVLVVCSDIRVLDFHEPSET 211
P RVLV+ SDI P E+
Sbjct: 130 PDTRVLVLASDIAKYGIGTPGES 152
>pdb|2HDB|A Chain A, Hmg-coa Synthase From Enterococcus Faecalis. Mutation
Alanine 110 To Glycine
pdb|2HDB|B Chain B, Hmg-coa Synthase From Enterococcus Faecalis. Mutation
Alanine 110 To Glycine
Length = 383
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 146 GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI 200
A V L RL+G++P I +GCY ++LAK+ +P +VLVV +DI
Sbjct: 87 AAAVVLHRLMGIQPFARSFEI-KEGCYGATAGLQLAKNHVALHPDKKVLVVAADI 140
>pdb|3LEH|A Chain A, The Crystal Structure Of Smu.943c From Streptococcus
Mutans Ua159
Length = 425
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 130 KITHLIFSAFYGVDMPGAD-VRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN 188
KI +I + VD A V + LLG++P R + CY + AK E +
Sbjct: 104 KIDMVILATESSVDQSKAGAVYVHSLLGIQP-FARSFEMKEACYSATAALNYAKLHVEKH 162
Query: 189 PGARVLVVCSDIRVLDFHEPSET 211
P RVLV+ SDI P E+
Sbjct: 163 PDTRVLVLASDIAKYGIGTPGES 185
>pdb|1X9E|A Chain A, Crystal Structure Of Hmg-Coa Synthase From Enterococcus
Faecalis
pdb|1X9E|B Chain B, Crystal Structure Of Hmg-Coa Synthase From Enterococcus
Faecalis
Length = 383
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 146 GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI 200
A V L RL+G++P I + CY ++LAK+ +P +VLVV +DI
Sbjct: 87 AAAVVLHRLMGIQPFARSFEI-KEACYGATAGLQLAKNHVALHPDKKVLVVAADI 140
>pdb|3V4X|A Chain A, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-Coa Synthase, Mvas, By
Hymeglusin
pdb|3V4X|B Chain B, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-Coa Synthase, Mvas, By
Hymeglusin
pdb|3V4X|C Chain C, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-Coa Synthase, Mvas, By
Hymeglusin
pdb|3V4X|D Chain D, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-Coa Synthase, Mvas, By
Hymeglusin
Length = 388
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 146 GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI 200
A V L RL+G++P I + CY ++LAK+ +P +VLVV +DI
Sbjct: 92 AAAVVLHRLMGIQPFARSFEI-KEACYGATAGLQLAKNHVALHPDKKVLVVAADI 145
>pdb|1XPL|A Chain A, Crystal Structure Of Staphylococcus Aureus Hmg-coa
Synthase With Acetoacetyl-coa And Acetylated Cysteine
pdb|1XPL|B Chain B, Crystal Structure Of Staphylococcus Aureus Hmg-coa
Synthase With Acetoacetyl-coa And Acetylated Cysteine
pdb|1XPL|C Chain C, Crystal Structure Of Staphylococcus Aureus Hmg-coa
Synthase With Acetoacetyl-coa And Acetylated Cysteine
pdb|1XPL|D Chain D, Crystal Structure Of Staphylococcus Aureus Hmg-coa
Synthase With Acetoacetyl-coa And Acetylated Cysteine
pdb|1XPM|A Chain A, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg-Coa And Acetoacetyl-Coa And Acetylated
Cysteine
pdb|1XPM|B Chain B, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg-Coa And Acetoacetyl-Coa And Acetylated
Cysteine
pdb|1XPM|C Chain C, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg-Coa And Acetoacetyl-Coa And Acetylated
Cysteine
pdb|1XPM|D Chain D, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg-Coa And Acetoacetyl-Coa And Acetylated
Cysteine
Length = 390
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 150 RLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
++ LLG++P + CY I+LAKD P +VLV+ +D
Sbjct: 90 QIHNLLGIQPFARCFEMKEAXCYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|1XPK|A Chain A, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg- Coa And With Acetoacetyl-Coa And
Acetylated Cysteine
pdb|1XPK|D Chain D, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg- Coa And With Acetoacetyl-Coa And
Acetylated Cysteine
Length = 388
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 150 RLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
++ LLG++P + CY I+LAKD P +VLV+ +D
Sbjct: 90 QIHNLLGIQPFARCFEMKEAXCYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|1XPK|C Chain C, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg- Coa And With Acetoacetyl-Coa And
Acetylated Cysteine
Length = 388
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 150 RLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
++ LLG++P R + CY I+LAKD P +VLV+ +D
Sbjct: 91 QIHNLLGIQPFA-RCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|1YSL|B Chain B, Crystal Structure Of Hmg-Coa Synthase From Enterococcus
Faecalis With Acetoacetyl-Coa Ligand
Length = 384
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 146 GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTV-IRLAKDIAENNPGARVLVVCSDI 200
A V L RL+G++P I + C G T ++LAK+ +P +VLVV +DI
Sbjct: 87 AAAVVLHRLMGIQPFARSFEI-KEACXYGATAGLQLAKNHVALHPDKKVLVVAADI 141
>pdb|3IL6|A Chain A, Structure Of E. Faecalis Fabh In Complex With 2-({4-[(3r,
5s)-3,5-Dimethylpiperidin-1-Yl]-3-Phenoxybenzoyl}amino)
Benzoic Acid
Length = 321
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 300 ISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK 359
++D + ++H ++D++ + + +EK + + +YGN A S+ +LDE
Sbjct: 235 VTDETVDYLLLHQANVRIIDKIARKTKISREKFLTN---MDKYGNTSAASIPILLDE--- 288
Query: 360 KSIEEMKATTGEGLECGVLFGFGPGLTVETVVL 392
++E G VL GFG GLT +++L
Sbjct: 289 -AVENGTLILGSQQRV-VLTGFGGGLTWGSLLL 319
>pdb|3IL4|A Chain A, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
pdb|3IL4|B Chain B, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
pdb|3IL4|C Chain C, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
pdb|3IL4|D Chain D, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
Length = 320
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 300 ISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK 359
++D + ++H ++D++ + + +EK + + +YGN A S+ +LDE
Sbjct: 234 VTDETVDYLLLHQASVRIIDKIARKTKISREKFLTN---MDKYGNTSAASIPILLDE--- 287
Query: 360 KSIEEMKATTGEGLECGVLFGFGPGLTVETVVL 392
++E G VL GFG GLT +++L
Sbjct: 288 -AVENGTLILGSQQRV-VLTGFGGGLTWGSLLL 318
>pdb|3IL5|A Chain A, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
pdb|3IL5|B Chain B, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
pdb|3IL5|C Chain C, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
pdb|3IL5|D Chain D, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
Length = 343
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 300 ISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK 359
++D + ++H ++D++ + + +EK + + +YGN A S+ +LDE
Sbjct: 255 VTDETVDYLLLHQANVRIIDKIARKTKISREKFLTN---MDKYGNTSAASIPILLDE--- 308
Query: 360 KSIEEMKATTGEGLECGVLFGFGPGLTVETVVL 392
++E G VL GFG GLT +++L
Sbjct: 309 -AVENGTLILGSQQRV-VLTGFGGGLTWGSLLL 339
>pdb|4EG1|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Substrate Methionine
pdb|4EG1|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Substrate Methionine
pdb|4EG3|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Product Methionyl-Adenylate
pdb|4EG3|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Product Methionyl-Adenylate
pdb|4EG6|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1325
pdb|4EG6|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1325
pdb|4EG8|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Compound Chem 89
pdb|4EG8|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Compound Chem 89
pdb|3U1E|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1387
pdb|3U1E|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1387
pdb|3U1F|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1392
pdb|3U1F|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1392
pdb|3U1G|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1415
pdb|3U1G|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1415
pdb|3U20|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1444
pdb|3U20|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1444
Length = 542
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 37 CFYQADYP-DFYFRVTNSDHKTELKEKFKRICERQSI 72
CF Q DY D++ R TN HK +KE + ++ ++ I
Sbjct: 87 CFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDI 123
>pdb|4EG5|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1312
pdb|4EG5|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1312
Length = 542
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 37 CFYQADYP-DFYFRVTNSDHKTELKEKFKRICERQSI 72
CF Q DY D++ R TN HK +KE + ++ ++ I
Sbjct: 87 CFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDI 123
>pdb|3V4N|A Chain A, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-coa Synthatse, Mvas, By
Hymeglusin
pdb|3V4N|B Chain B, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-coa Synthatse, Mvas, By
Hymeglusin
pdb|3V4N|C Chain C, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-coa Synthatse, Mvas, By
Hymeglusin
pdb|3V4N|D Chain D, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-coa Synthatse, Mvas, By
Hymeglusin
Length = 388
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 146 GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI 200
A V L RL+G++P I + Y ++LAK+ +P +VLVV +DI
Sbjct: 92 AAAVVLHRLMGIQPFARSFEI-KEAXYGATAGLQLAKNHVALHPDKKVLVVAADI 145
>pdb|1YSL|A Chain A, Crystal Structure Of Hmg-Coa Synthase From Enterococcus
Faecalis With Acetoacetyl-Coa Ligand
Length = 402
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 146 GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI 200
A V L RL+G++P I + Y ++LAK+ +P +VLVV +DI
Sbjct: 106 AAAVVLHRLMGIQPFARSFEI-KEAXYGATAGLQLAKNHVALHPDKKVLVVAADI 159
>pdb|1TVZ|A Chain A, Crystal Structure Of 3-hydroxy-3-methylglutaryl-coenzyme A
Synthase From Staphylococcus Aureus
pdb|1TXT|A Chain A, Staphylococcus Aureus 3-hydroxy-3-methylglutaryl-coa
Synthase
pdb|1TXT|B Chain B, Staphylococcus Aureus 3-hydroxy-3-methylglutaryl-coa
Synthase
pdb|1TXT|C Chain C, Staphylococcus Aureus 3-hydroxy-3-methylglutaryl-coa
Synthase
pdb|1TXT|D Chain D, Staphylococcus Aureus 3-hydroxy-3-methylglutaryl-coa
Synthase
Length = 388
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 150 RLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
++ LLG++P R + Y I+LAKD P +VLV+ +D
Sbjct: 91 QIHNLLGIQPFA-RCFEMKEAXYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|1XPK|B Chain B, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg- Coa And With Acetoacetyl-Coa And
Acetylated Cysteine
Length = 388
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 150 RLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
++ LLG++P R + Y I+LAKD P +VLV+ +D
Sbjct: 91 QIHNLLGIQPFA-RCFEMKEAXYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|1XR7|A Chain A, Crystal Structure Of Rna-Dependent Rna Polymerase 3d From
Human Rhinovirus Serotype 16
pdb|1XR7|B Chain B, Crystal Structure Of Rna-Dependent Rna Polymerase 3d From
Human Rhinovirus Serotype 16
Length = 460
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 22/106 (20%)
Query: 271 TYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGL--LDQVEK----- 323
T C L+ + VA+ +Y + + + P I+ +S+F G DGL LD
Sbjct: 66 TECSLNEHIQVAVAHYSAQLATLDIDPQPIAMEDSVF-----GMDGLEALDLNTSAGYPY 120
Query: 324 -TLGLRKEKLWAS--------RYVLREYGNMGAPSVFFILDEVRKK 360
TLG++K+ L + + L +YG + P + F+ DE+RKK
Sbjct: 121 VTLGIKKKDLINNKTKDISKLKLALDKYG-VDLPMITFLKDELRKK 165
>pdb|1TP7|A Chain A, Crystal Structure Of The Rna-Dependent Rna Polymerase From
Human Rhinovirus 16
pdb|1TP7|B Chain B, Crystal Structure Of The Rna-Dependent Rna Polymerase From
Human Rhinovirus 16
pdb|1TP7|C Chain C, Crystal Structure Of The Rna-Dependent Rna Polymerase From
Human Rhinovirus 16
pdb|1TP7|D Chain D, Crystal Structure Of The Rna-Dependent Rna Polymerase From
Human Rhinovirus 16
Length = 460
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 22/106 (20%)
Query: 271 TYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGL--LDQVEK----- 323
T C L+ + VA+ +Y + + + P I+ +S+F G DGL LD
Sbjct: 66 TECSLNEHIQVAVAHYSAQLATLDIDPQPIAXEDSVF-----GXDGLEALDLNTSAGYPY 120
Query: 324 -TLGLRKEKLWAS--------RYVLREYGNMGAPSVFFILDEVRKK 360
TLG++K+ L + + L +Y ++ P + F+ DE+RKK
Sbjct: 121 VTLGIKKKDLINNKTKDISKLKLALDKY-DVDLPXITFLKDELRKK 165
>pdb|3TUN|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1356
pdb|3TUN|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1356
pdb|4EG4|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1289
pdb|4EG4|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1289
pdb|4EG7|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1331
pdb|4EG7|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1331
pdb|4EGA|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1320
pdb|4EGA|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1320
pdb|3U1Z|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1433
pdb|3U1Z|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1433
Length = 542
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 38 FYQADYP-DFYFRVTNSDHKTELKEKFKRICERQSI 72
F Q DY D++ R TN HK +KE + ++ ++ I
Sbjct: 88 FEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDI 123
>pdb|2X0I|A Chain A, 2.9 A Resolution Structure Of Malate Dehydrogenase From
Archaeoglobus Fulgidus In Complex With Nadh
pdb|2X0J|A Chain A, 2.8 A Resolution Structure Of Malate Dehydrogenase From
Archaeoglobus Fulgidus In Complex With Etheno-Nad
Length = 294
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 155 LGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDF 205
L KP + RL + + G + +AK I EN P +++LVV + + V+ +
Sbjct: 79 LARKPGMTRLDLAHKNA---GIIKDIAKKIVENAPESKILVVTNPMDVMTY 126
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,989,566
Number of Sequences: 62578
Number of extensions: 501720
Number of successful extensions: 1173
Number of sequences better than 100.0: 59
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1074
Number of HSP's gapped (non-prelim): 66
length of query: 402
length of database: 14,973,337
effective HSP length: 101
effective length of query: 301
effective length of database: 8,652,959
effective search space: 2604540659
effective search space used: 2604540659
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)